Miyakogusa Predicted Gene
- Lj5g3v1598550.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1598550.1 Non Chatacterized Hit- tr|I1JBG5|I1JBG5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.15268
PE,82.75,0,WD_REPEATS_2,WD40 repeat;
WD_REPEATS_REGION,WD40-repeat-containing domain; WD40 repeats,WD40
repeat;,CUFF.55569.1
(510 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G47410.1 | Symbols: | WD40/YVTN repeat-like-containing domai... 681 0.0
AT2G47410.2 | Symbols: | WD40/YVTN repeat-like-containing domai... 678 0.0
AT5G49430.1 | Symbols: | WD40/YVTN repeat-like-containing domai... 647 0.0
AT3G49660.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 67 3e-11
AT2G41500.1 | Symbols: LIS, EMB2776 | WD-40 repeat family protei... 66 6e-11
AT2G21390.1 | Symbols: | Coatomer, alpha subunit | chr2:9152428... 66 6e-11
AT5G16750.1 | Symbols: TOZ | Transducin family protein / WD-40 r... 65 1e-10
AT5G25150.1 | Symbols: TAF5 | TBP-associated factor 5 | chr5:867... 65 1e-10
AT4G02730.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 65 2e-10
AT1G62020.1 | Symbols: | Coatomer, alpha subunit | chr1:2291981... 63 4e-10
AT3G16650.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 62 1e-09
AT2G43770.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 60 2e-09
AT5G52820.1 | Symbols: | WD-40 repeat family protein / notchles... 60 3e-09
AT5G67320.1 | Symbols: HOS15 | WD-40 repeat family protein | chr... 60 5e-09
AT4G15900.1 | Symbols: PRL1 | pleiotropic regulatory locus 1 | c... 59 9e-09
AT3G44530.1 | Symbols: HIRA | homolog of histone chaperone HIRA ... 58 2e-08
AT5G64730.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 58 2e-08
AT1G73720.1 | Symbols: SMU1 | transducin family protein / WD-40 ... 58 2e-08
AT3G44530.2 | Symbols: HIRA | homolog of histone chaperone HIRA ... 58 2e-08
AT5G08390.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 57 2e-08
AT1G61210.2 | Symbols: | Transducin/WD40 repeat-like superfamil... 57 3e-08
AT1G61210.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 57 3e-08
AT4G34460.4 | Symbols: AGB1, ELK4, ATAGB1 | GTP binding protein ... 57 3e-08
AT4G34460.1 | Symbols: AGB1, ELK4, ATAGB1 | GTP binding protein ... 57 3e-08
AT4G34460.2 | Symbols: AGB1, ELK4, ATAGB1 | GTP binding protein ... 57 4e-08
AT4G34460.3 | Symbols: AGB1, ELK4, ATAGB1 | GTP binding protein ... 56 5e-08
AT1G79990.3 | Symbols: | structural molecules | chr1:30085910-3... 55 1e-07
AT1G79990.5 | Symbols: | structural molecules | chr1:30085910-3... 55 1e-07
AT1G79990.1 | Symbols: | structural molecules | chr1:30084522-3... 54 2e-07
AT1G49040.1 | Symbols: SCD1 | stomatal cytokinesis defective / S... 54 2e-07
AT1G11160.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 54 2e-07
AT3G15980.1 | Symbols: | Coatomer, beta' subunit | chr3:5411699... 54 3e-07
AT3G15980.4 | Symbols: | Coatomer, beta' subunit | chr3:5411699... 54 3e-07
AT1G52360.1 | Symbols: | Coatomer, beta' subunit | chr1:1949928... 54 3e-07
AT3G15980.5 | Symbols: | Coatomer, beta' subunit | chr3:5412015... 54 3e-07
AT3G15980.3 | Symbols: | Coatomer, beta' subunit | chr3:5412015... 54 3e-07
AT3G15980.2 | Symbols: | Coatomer, beta' subunit | chr3:5412015... 54 3e-07
AT2G32700.7 | Symbols: LUH | LEUNIG_homolog | chr2:13867235-1387... 54 3e-07
AT2G32700.2 | Symbols: LUH | LEUNIG_homolog | chr2:13867235-1387... 54 3e-07
AT2G32700.1 | Symbols: LUH | LEUNIG_homolog | chr2:13867235-1387... 54 3e-07
AT2G32700.4 | Symbols: LUH | LEUNIG_homolog | chr2:13867235-1387... 54 3e-07
AT2G32700.5 | Symbols: LUH | LEUNIG_homolog | chr2:13867235-1387... 54 3e-07
AT2G32700.3 | Symbols: LUH | LEUNIG_homolog | chr2:13867235-1387... 54 3e-07
AT2G32700.6 | Symbols: LUH | LEUNIG_homolog | chr2:13867235-1387... 54 3e-07
AT1G52360.2 | Symbols: | Coatomer, beta' subunit | chr1:1949942... 54 3e-07
AT5G23430.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 54 4e-07
AT5G23430.2 | Symbols: | Transducin/WD40 repeat-like superfamil... 54 4e-07
AT3G18950.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 52 1e-06
AT1G15440.2 | Symbols: PWP2 | periodic tryptophan protein 2 | ch... 52 1e-06
AT1G15440.1 | Symbols: PWP2, ATPWP2 | periodic tryptophan protei... 52 1e-06
AT4G05410.1 | Symbols: YAO | Transducin/WD40 repeat-like superfa... 50 3e-06
AT5G13480.2 | Symbols: FY | Transducin/WD40 repeat-like superfam... 50 3e-06
AT3G18130.1 | Symbols: RACK1C_AT | receptor for activated C kina... 50 3e-06
AT1G71840.1 | Symbols: | transducin family protein / WD-40 repe... 50 4e-06
AT5G13480.1 | Symbols: FY | Transducin/WD40 repeat-like superfam... 50 5e-06
AT1G48630.1 | Symbols: RACK1B_AT | receptor for activated C kina... 49 8e-06
>AT2G47410.1 | Symbols: | WD40/YVTN repeat-like-containing
domain;Bromodomain | chr2:19449133-19456991 FORWARD
LENGTH=1520
Length = 1520
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/469 (70%), Positives = 378/469 (80%), Gaps = 13/469 (2%)
Query: 42 TDVDIDLREVYFLIMHFLSAGPCQKTFVQLGNELLEHQLLPRRYHAWYSRSGEASGNDVD 101
TD+D+DLREVYFLI+HFLS GPC++TF L +E+LE LLPRRYH+W+SRSG SG
Sbjct: 36 TDLDMDLREVYFLILHFLSIGPCERTFGHLRDEILEKGLLPRRYHSWWSRSGIYSGRA-- 93
Query: 102 NDDGISLPLNYDDLANRYPHIAKDHLVKLLKQLMLSMTHPLHGKLGGSSPNAADVPTLLG 161
+DDGISLPL+YD+L RYPHI KDHLVKLLKQL+L+ + P H ++ G++PNAADVPTLLG
Sbjct: 94 DDDGISLPLSYDNLIERYPHIEKDHLVKLLKQLILNPSFPSHMRVEGNAPNAADVPTLLG 153
Query: 162 HGSFSLLDTDGKTADKPVKPLPLYLRWPHMKANQVQGLSLREIGGGFTKHHRAPSIRSAC 221
G+FSL+D + + + YLRWPHM A+QV+GLSLREIGGGF KHHRAPSI SAC
Sbjct: 154 SGTFSLVDRSNNIESQKARHVASYLRWPHMHADQVRGLSLREIGGGFRKHHRAPSILSAC 213
Query: 222 YAIAKPSTMVQRMQNIKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLAS 281
+AIAKPSTMVQ+MQNIKKLRGHR AVYCAIFD SGRYVI+GSDDRLVKIWSMETA CLAS
Sbjct: 214 HAIAKPSTMVQKMQNIKKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLAS 273
Query: 282 CRGHEGDITDMXXXXXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPT 341
CRGHEGDITD+ DFVIRVWRLPDGMPISVLRGHTGAV IAFSPR
Sbjct: 274 CRGHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQA 333
Query: 342 AVYQLLSSSDDGTCRIWDARNSH-NPRIYVPRPSDSVTGKGNAPPANLPSSSNGQHSYQI 400
+VYQLLSSSDDGTCRIWDAR S PRIYVP PSD+ TG S+SN S+QI
Sbjct: 334 SVYQLLSSSDDGTCRIWDARYSQWLPRIYVPSPSDANTG----------STSNASQSHQI 383
Query: 401 LCCAYNANGTVFVTGSADTFARVWSALKPNNSDSEQPVHEIDLLSGHENDVNYVQFSGCS 460
LCCAYNANGT+FVTGS+D+ ARVWSA KPN D+EQP HE+D+L GHENDVNYVQFSGC+
Sbjct: 384 LCCAYNANGTIFVTGSSDSNARVWSASKPNLDDAEQPTHELDVLRGHENDVNYVQFSGCA 443
Query: 461 VASKLVTSDSWREENTQKFRNFWYCHDNIVTCSRDGSAIIWVPRSRRSH 509
VA K T+D+ +E++ KF+N W+CHDNIVTCSRDGSAIIW PRSR+ H
Sbjct: 444 VAPKSSTADALKEDSYPKFKNSWFCHDNIVTCSRDGSAIIWTPRSRKFH 492
>AT2G47410.2 | Symbols: | WD40/YVTN repeat-like-containing
domain;Bromodomain | chr2:19449133-19456991 FORWARD
LENGTH=1519
Length = 1519
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/469 (70%), Positives = 380/469 (81%), Gaps = 14/469 (2%)
Query: 42 TDVDIDLREVYFLIMHFLSAGPCQKTFVQLGNELLEHQLLPRRYHAWYSRSGEASGNDVD 101
TD+D+DLREVYFLI+HFLS GPC++TF L +E+LE LLPRRYH+W+SRSG SG
Sbjct: 36 TDLDMDLREVYFLILHFLSIGPCERTFGHLRDEILEKGLLPRRYHSWWSRSGIYSGRA-- 93
Query: 102 NDDGISLPLNYDDLANRYPHIAKDHLVKLLKQLMLSMTHPLHGKLGGSSPNAADVPTLLG 161
+DDGISLPL+YD+L RYPHI KDHLVKLLKQL+L+ + P H ++ G++PNAADVPTLLG
Sbjct: 94 DDDGISLPLSYDNLIERYPHIEKDHLVKLLKQLILNPSFPSHMRVEGNAPNAADVPTLLG 153
Query: 162 HGSFSLLDTDGKTADKPVKPLPLYLRWPHMKANQVQGLSLREIGGGFTKHHRAPSIRSAC 221
G+FSL+D + + K + + YLRWPHM A+QV+GLSLREIGGGF KHHRAPSI SAC
Sbjct: 154 SGTFSLVDRNNIESQK-ARHVASYLRWPHMHADQVRGLSLREIGGGFRKHHRAPSILSAC 212
Query: 222 YAIAKPSTMVQRMQNIKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLAS 281
+AIAKPSTMVQ+MQNIKKLRGHR AVYCAIFD SGRYVI+GSDDRLVKIWSMETA CLAS
Sbjct: 213 HAIAKPSTMVQKMQNIKKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLAS 272
Query: 282 CRGHEGDITDMXXXXXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPT 341
CRGHEGDITD+ DFVIRVWRLPDGMPISVLRGHTGAV IAFSPR
Sbjct: 273 CRGHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQA 332
Query: 342 AVYQLLSSSDDGTCRIWDARNSH-NPRIYVPRPSDSVTGKGNAPPANLPSSSNGQHSYQI 400
+VYQLLSSSDDGTCRIWDAR S PRIYVP PSD+ TG S+SN S+QI
Sbjct: 333 SVYQLLSSSDDGTCRIWDARYSQWLPRIYVPSPSDANTG----------STSNASQSHQI 382
Query: 401 LCCAYNANGTVFVTGSADTFARVWSALKPNNSDSEQPVHEIDLLSGHENDVNYVQFSGCS 460
LCCAYNANGT+FVTGS+D+ ARVWSA KPN D+EQP HE+D+L GHENDVNYVQFSGC+
Sbjct: 383 LCCAYNANGTIFVTGSSDSNARVWSASKPNLDDAEQPTHELDVLRGHENDVNYVQFSGCA 442
Query: 461 VASKLVTSDSWREENTQKFRNFWYCHDNIVTCSRDGSAIIWVPRSRRSH 509
VA K T+D+ +E++ KF+N W+CHDNIVTCSRDGSAIIW PRSR+ H
Sbjct: 443 VAPKSSTADALKEDSYPKFKNSWFCHDNIVTCSRDGSAIIWTPRSRKFH 491
>AT5G49430.1 | Symbols: | WD40/YVTN repeat-like-containing
domain;Bromodomain | chr5:20037338-20045454 REVERSE
LENGTH=1677
Length = 1677
Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/479 (65%), Positives = 372/479 (77%), Gaps = 14/479 (2%)
Query: 37 VGRVGTDVDIDLREVYFLIMHFLSAGPCQKTFVQLGNELLEHQLLPRRYHAWYSRSGEAS 96
V V ++D+DLREVYFL++H LS+GPCQKT+ L +ELLEH+LLPRRYHAWYSRSG S
Sbjct: 38 VQSVAPNIDLDLREVYFLMLHLLSSGPCQKTYALLRHELLEHELLPRRYHAWYSRSGLPS 97
Query: 97 GNDVDNDDGISLPLNYDDLANRYPHIAKDHLVKLLKQLML--SMTHPLHGKLGGSSPNAA 154
G++ NDDG S PLNY +LA RY H+ KDHLV+LLKQL+ + +P G G+ A
Sbjct: 98 GDE--NDDGNSFPLNYTELAKRYSHVKKDHLVELLKQLVFVSNRPNPSRGIGDGNKMIGA 155
Query: 155 DVPTLLGHGSFSLLDTDGKTADKPVKPLPLYLRWPHMKANQVQGLSLREIGGGFTKHHRA 214
VPTLLG GSFSLL +D + +KP P+ +RWPHM A+QV+G+SLREIGGGF +HHRA
Sbjct: 156 GVPTLLGTGSFSLLSSDKEIVGSDLKPPPIGMRWPHMHADQVRGISLREIGGGFARHHRA 215
Query: 215 PSIRSACYAIAKPSTMVQRMQNIKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSME 274
PSIR+ACY IAKPS+MVQ+MQNIK+LRGHR AVYCAI D SGRYVI+GSDDRLVK+WSM+
Sbjct: 216 PSIRAACYVIAKPSSMVQKMQNIKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMD 275
Query: 275 TAFCLASCRGHEGDITDMXXXXXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTI 334
TA+CLASCRGHEGDITD+ D VIRVWRLPDG+P+SVLRGHTGAV I
Sbjct: 276 TAYCLASCRGHEGDITDLAVSSNNIFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAI 335
Query: 335 AFSPRPTAVYQLLSSSDDGTCRIWDARNSH-NPRIYVPRPSDSVTGKGNAPPANLPSSSN 393
AFSPRP + YQLLSSSDDGTCRIWDAR + PRIYVPRP S GK + PSSSN
Sbjct: 336 AFSPRPGSPYQLLSSSDDGTCRIWDARGAQFAPRIYVPRPP-SPDGKNSG-----PSSSN 389
Query: 394 GQHSYQILCCAYNANGTVFVTGSADTFAR---VWSALKPNNSDSEQPVHEIDLLSGHEND 450
Q S+QI CCA+NA+G+VFVTGS+DT AR VWSA K N D EQP HE+D+L+GHEND
Sbjct: 390 AQQSHQIFCCAFNASGSVFVTGSSDTLARVYSVWSANKTNTDDPEQPNHEMDVLAGHEND 449
Query: 451 VNYVQFSGCSVASKLVTSDSWREENTQKFRNFWYCHDNIVTCSRDGSAIIWVPRSRRSH 509
VNYVQFSGC+ SK +D ++EN KF+N W+CHDNIVTCSRDGSAIIW+PR RRSH
Sbjct: 450 VNYVQFSGCAAGSKFSVTDYSKDENVPKFKNSWFCHDNIVTCSRDGSAIIWIPRLRRSH 508
>AT3G49660.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:18413690-18415223 FORWARD LENGTH=317
Length = 317
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 77/189 (40%), Gaps = 26/189 (13%)
Query: 237 IKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGDITDMXXXX 296
+++ GH + F R+++S SDD+ +K+W +ET + + GH +
Sbjct: 64 VQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNP 123
Query: 297 XXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSDDGTCR 356
D +R+W + G + VL H+ V + F+ + + +SSS DG CR
Sbjct: 124 QSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLI---VSSSYDGLCR 180
Query: 357 IWDARNSHNPRIYVPRPSDSVTGKGNAPPANLPSSSNGQHSYQILCCAYNANGTVFVTGS 416
IWD+ H + + + PP + ++ NG + G+
Sbjct: 181 IWDSGTGHCVKTLIDDEN---------PPVSF--------------VRFSPNGKFILVGT 217
Query: 417 ADTFARVWS 425
D R+W+
Sbjct: 218 LDNTLRLWN 226
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 76/192 (39%), Gaps = 32/192 (16%)
Query: 238 KKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMET-----AFCLASCRGHEGDITDM 292
+ L H AV F GR + S S D+ ++ +++ T A + GHE I+D+
Sbjct: 18 QTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 77
Query: 293 XXXXXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSDD 352
D +++W + G I L GHT + F+P+ ++S S D
Sbjct: 78 AFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSN---MIVSGSFD 134
Query: 353 GTCRIWDARNSHNPRIYVPRPSDSVTGKGNAPPANLPSSSNGQHSYQILCCAYNANGTVF 412
T RIWD ++ +P SD VT +N +G++
Sbjct: 135 ETVRIWDVTTGKCLKV-LPAHSDPVTA-----------------------VDFNRDGSLI 170
Query: 413 VTGSADTFARVW 424
V+ S D R+W
Sbjct: 171 VSSSYDGLCRIW 182
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 71/189 (37%), Gaps = 25/189 (13%)
Query: 237 IKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGDITDMXXXX 296
IK L GH +C F+ ++SGS D V+IW + T CL H +T +
Sbjct: 106 IKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNR 165
Query: 297 XXXXXXXXXXDFVIRVWRLPDGMPI-SVLRGHTGAVNTIAFSPRPTAVYQLLSSSDDGTC 355
D + R+W G + +++ V+ + FSP + L + D T
Sbjct: 166 DGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFI---LVGTLDNTL 222
Query: 356 RIWDARNSHNPRIYVPRPSDSVTGKGNAPPANLPSSSNGQHSYQILCCAYNANGTVFVTG 415
R+W+ ++ + Y TG NA Y I NG V+G
Sbjct: 223 RLWNISSAKFLKTY--------TGHVNA-------------QYCISSAFSVTNGKRIVSG 261
Query: 416 SADTFARVW 424
S D +W
Sbjct: 262 SEDNCVHMW 270
>AT2G41500.1 | Symbols: LIS, EMB2776 | WD-40 repeat family protein /
small nuclear ribonucleoprotein Prp4p-related |
chr2:17304319-17306855 REVERSE LENGTH=554
Length = 554
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 87/226 (38%), Gaps = 22/226 (9%)
Query: 237 IKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGDITDMXXXX 296
++ GH + F SG+Y+ + S D+ ++W + T L GH + +
Sbjct: 332 LQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQ 391
Query: 297 XXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSDDGTCR 356
D + RVW L G I V +GH V ++ FSP Y L S +D CR
Sbjct: 392 DGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNG---YHLASGGEDNQCR 448
Query: 357 IWDARNSHNPRI------------YVPRPSDSVTGKGNAPPANLPS-------SSNGQHS 397
IWD R + I Y P+ + N+ S S H
Sbjct: 449 IWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHE 508
Query: 398 YQILCCAYNANGTVFVTGSADTFARVWSALKPNNSDSEQPVHEIDL 443
++ A+ + T S D ++W++ ++ D E+ +IDL
Sbjct: 509 SKVASLDITADSSCIATVSHDRTIKLWTSSGNDDEDEEKETMDIDL 554
>AT2G21390.1 | Symbols: | Coatomer, alpha subunit |
chr2:9152428-9156577 FORWARD LENGTH=1218
Length = 1218
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 113/274 (41%), Gaps = 34/274 (12%)
Query: 192 KANQVQGLSLREIGGGFTKHHRAPSIRSACYAIAKPSTMVQ----RMQN-IKKLRGHRVA 246
K+N+V+GLS H + P I ++ + S ++Q RM I + H
Sbjct: 8 KSNRVKGLSF---------HPKRPWILASLH-----SGVIQLWDYRMGTLIDRFDEHEGP 53
Query: 247 VYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGDITDMXXXXXXXXXXXXXX 306
V F S +SG DD +K+W+ +T CL + GH I +
Sbjct: 54 VRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASD 113
Query: 307 DFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSDDGTCRIWD----ARN 362
D IR+W ISVL GH V +F P+ V +S+S D T R+WD +
Sbjct: 114 DQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV---VSASLDQTVRVWDIGALKKK 170
Query: 363 SHNPRIYVPRPSDSVTGKGNAPPANLPSSSNGQHSYQILCCAYNANGTVFVTGSADTFAR 422
S +P + R S + A + G H + +++ + V+G+ D +
Sbjct: 171 SASPADDLMRFSQMNSDLFGGVDAIVKYVLEG-HDRGVNWASFHPTLPLIVSGADDRQVK 229
Query: 423 VWSALKPNNSDSEQPVHEIDLLSGHENDVNYVQF 456
+W +E E+D L GH N+V+ V F
Sbjct: 230 LWRM-------NETKAWEVDTLRGHMNNVSSVMF 256
>AT5G16750.1 | Symbols: TOZ | Transducin family protein / WD-40
repeat family protein | chr5:5504541-5509266 REVERSE
LENGTH=876
Length = 876
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
Query: 257 RYVISGSDDRLVKIWSMETAFCLASCRGHEGDITDMXXXXXXXXXXXXXXDFVIRVWRLP 316
+ + S R +++W +ET C+ S +GHEG + M D + VW +
Sbjct: 73 KLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVD 132
Query: 317 DGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSDDGTCRIWD--ARNSHNP 366
G RGH G V++I F P L+S SDD T R+WD A+N+
Sbjct: 133 GGFCTHYFRGHKGVVSSILFHPDSNKNI-LISGSDDATVRVWDLNAKNTEKK 183
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/190 (20%), Positives = 66/190 (34%), Gaps = 27/190 (14%)
Query: 259 VISGSDDRLVKIWSMETAFCLASCRGHEGDITDMXXXXXXXXXXXXXXDFVIRVWRLPDG 318
V +GS+DR IW + + + +GH+ I + D +++W + DG
Sbjct: 514 VCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDG 573
Query: 319 MPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSDDGTCRIWDARNSHNPRIYVPRPSDSVT 378
+ GHT +V +F T Q +S DG ++W+ S Y
Sbjct: 574 SCLKTFEGHTSSVLRASFITDGT---QFVSCGADGLLKLWNVNTSECIATY--------- 621
Query: 379 GKGNAPPANLPSSSNGQHSYQILCCAYNANGTVFVTGSADTFARVWSALKPNNSDSEQPV 438
QH ++ A + TG D +W ++ + +
Sbjct: 622 ---------------DQHEDKVWALAVGKKTEMIATGGGDAVINLWHDSTASDKEDDFRK 666
Query: 439 HEIDLLSGHE 448
E +L G E
Sbjct: 667 EEEAILRGQE 676
>AT5G25150.1 | Symbols: TAF5 | TBP-associated factor 5 |
chr5:8677117-8682058 FORWARD LENGTH=669
Length = 669
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 80/204 (39%), Gaps = 23/204 (11%)
Query: 240 LRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGDITDMXXXXXXX 299
L GH VY A F G +V+S S D +++WS + L +GH + D
Sbjct: 414 LLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGH 473
Query: 300 XXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSDDGTCRIWD 359
D R+W + P+ ++ GH V+ + + P + + S D T R+WD
Sbjct: 474 YFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYI---ATGSSDKTVRLWD 530
Query: 360 ARNSHNPRIYVPRPSDSVTGKGNAPPANLPSSSNGQ-------------------HSYQI 400
+ RI++ S V +P +S + H+ +
Sbjct: 531 VQTGECVRIFIGHRS-MVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCV 589
Query: 401 LCCAYNANGTVFVTGSADTFARVW 424
+Y+ G++ +GSAD ++W
Sbjct: 590 WSLSYSGEGSLLASGSADCTVKLW 613
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 3/133 (2%)
Query: 231 VQRMQNIKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGDIT 290
+ R+Q ++ + GH V C + + Y+ +GS D+ V++W ++T C+ GH +
Sbjct: 489 MDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVL 548
Query: 291 DMXXXXXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSS 350
+ D I +W L I+ L GH V ++++S + L S S
Sbjct: 549 SLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSL---LASGS 605
Query: 351 DDGTCRIWDARNS 363
D T ++WD +S
Sbjct: 606 ADCTVKLWDVTSS 618
>AT4G02730.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr4:1207759-1209066 FORWARD LENGTH=333
Length = 333
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 105/263 (39%), Gaps = 41/263 (15%)
Query: 235 QNIKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGDITDMXX 294
+++K L GH A+ C F G + S S D+ + +WS + GH I+D+
Sbjct: 34 RHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAW 93
Query: 295 XXXXXXXXXXXXDFVIRVW--RLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSDD 352
D +R+W R P + VLRGHT V + F+P P+ + ++S S D
Sbjct: 94 SSDSHYTCSASDDCTLRIWDARSPYEC-LKVLRGHTNFVFCVNFNP-PSNL--IVSGSFD 149
Query: 353 GTCRIWDARNSHNPRIYVPRPSDSVTGKGNAPPANLPSSSNGQHSYQILCCAYNANGTVF 412
T RIW+ + R+ HS I +N +G++
Sbjct: 150 ETIRIWEVKTGKCVRMI------------------------KAHSMPISSVHFNRDGSLI 185
Query: 413 VTGSADTFARVWSALKPNNSDSEQPVHEIDLLSGHENDVNYVQFSGCSVASKLVTSDSWR 472
V+ S D ++W D+++ L+ V++ +FS + T DS
Sbjct: 186 VSASHDGSCKIW--------DAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTL 237
Query: 473 EEN---TQKFRNFWYCHDNIVTC 492
+ + T KF + H N V C
Sbjct: 238 KLSNYATGKFLKVYTGHTNKVFC 260
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 62/148 (41%), Gaps = 6/148 (4%)
Query: 237 IKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGDITDMXXXX 296
+K LRGH V+C F+ ++SGS D ++IW ++T C+ + H I+ +
Sbjct: 121 LKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNR 180
Query: 297 XXXXXXXXXXDFVIRVWRLPDGMPI-SVLRGHTGAVNTIAFSPRPTAVY-----QLLSSS 350
D ++W +G + +++ + AV+ FSP + L S
Sbjct: 181 DGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLS 240
Query: 351 DDGTCRIWDARNSHNPRIYVPRPSDSVT 378
+ T + H +++ + SVT
Sbjct: 241 NYATGKFLKVYTGHTNKVFCITSAFSVT 268
>AT1G62020.1 | Symbols: | Coatomer, alpha subunit |
chr1:22919814-22923728 FORWARD LENGTH=1216
Length = 1216
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 112/274 (40%), Gaps = 34/274 (12%)
Query: 192 KANQVQGLSLREIGGGFTKHHRAPSIRSACYAIAKPSTMVQ----RMQN-IKKLRGHRVA 246
K+N+V+GLS H + P I ++ + S ++Q RM I + H
Sbjct: 8 KSNRVKGLSF---------HPKRPWILASLH-----SGVIQLWDYRMGTLIDRFDEHEGP 53
Query: 247 VYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGDITDMXXXXXXXXXXXXXX 306
V F S +SG DD +K+W+ + CL + GH I +
Sbjct: 54 VRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASD 113
Query: 307 DFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSDDGTCRIWDA----RN 362
D IR+W +SVL GH V +F P+ V +S+S D T R+WD +
Sbjct: 114 DQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLV---VSASLDQTVRVWDIGALRKK 170
Query: 363 SHNPRIYVPRPSDSVTGKGNAPPANLPSSSNGQHSYQILCCAYNANGTVFVTGSADTFAR 422
+ +P + R + + A + G H + A++ + V+G+ D +
Sbjct: 171 TVSPADDIMRLTQMNSDLFGGVDAIVKYVLEG-HDRGVNWAAFHPTLPLIVSGADDRQVK 229
Query: 423 VWSALKPNNSDSEQPVHEIDLLSGHENDVNYVQF 456
+W +E E+D L GH N+V+ V F
Sbjct: 230 LWRM-------NETKAWEVDTLRGHMNNVSSVMF 256
>AT3G16650.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:5671133-5675106 FORWARD LENGTH=479
Length = 479
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 65/166 (39%), Gaps = 7/166 (4%)
Query: 235 QNIKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGDITDMXX 294
+N + L+GH V FD S + +GS DR +KIW + T + GH G + +
Sbjct: 161 KNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAV 220
Query: 295 XXXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSDDGT 354
D ++ W L I GH V +A P V L+ D
Sbjct: 221 SNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVV---LTGGRDSV 277
Query: 355 CRIWDARNSHNPRIYVPRPSDSVTGKGNAPPANLPSSSNGQHSYQI 400
CR+WD R +I+V P DS A P + P G H I
Sbjct: 278 CRVWDIRTKM--QIFV-LPHDSDVFSVLARPTD-PQVITGSHDSTI 319
>AT2G43770.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr2:18134272-18135303 REVERSE LENGTH=343
Length = 343
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 84/223 (37%), Gaps = 39/223 (17%)
Query: 237 IKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFC--LASCRGHEGDITDMXX 294
I L GH AVY F+ +G + SGS DR + +W + C +GH+ I D+
Sbjct: 46 IMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVH-GDCKNFMVLKGHKNAILDLHW 104
Query: 295 XXXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSDDGT 354
D +R W + G I + H+ VN+ + R + ++S SDDGT
Sbjct: 105 TSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPL--IISGSDDGT 162
Query: 355 CRIWDARNSHNPRIYVPRPSDSVTGKGNAPPANLPSSSNGQHSYQILCCAYNANGTVFVT 414
++WD R + + + YQI +++ T
Sbjct: 163 AKLWDMRQRGAIQTFPDK-------------------------YQITAVSFSDAADKIFT 197
Query: 415 GSADTFARVWSALKPNNSDSEQPVHEIDLLSGHENDVNYVQFS 457
G D +VW K + + L GH++ + + S
Sbjct: 198 GGVDNDVKVWDLRKGEATMT---------LEGHQDTITGMSLS 231
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 91/229 (39%), Gaps = 34/229 (14%)
Query: 231 VQRMQNIKKLRGHRVAV-YCAIFDVSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGDI 289
V+ + IKK+ H V C +ISGSDD K+W M + + + I
Sbjct: 125 VETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFP-DKYQI 183
Query: 290 TDMXXXXXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSS 349
T + D ++VW L G L GH + ++ SP Y L +
Sbjct: 184 TAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSP--DGSYLLTNG 241
Query: 350 SDDGTCRIWDARNSHNPRIYVPRPSDSVTGKGNAPPANLPSSSNGQHSYQ--ILCCAYNA 407
D+ C +WD R Y P+ +G+ QH+++ +L C+++
Sbjct: 242 MDNKLC-VWDMRP------YAPQNRCVKIFEGH------------QHNFEKNLLKCSWSP 282
Query: 408 NGTVFVTGSADTFARVWSALKPNNSDSEQPVHEIDLLSGHENDVNYVQF 456
+GT GS+D +W ++ S + +++ L GH VN F
Sbjct: 283 DGTKVTAGSSDRMVHIW------DTTSRRTIYK---LPGHTGSVNECVF 322
>AT5G52820.1 | Symbols: | WD-40 repeat family protein / notchless
protein, putative | chr5:21401423-21404203 FORWARD
LENGTH=473
Length = 473
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 88/219 (40%), Gaps = 38/219 (17%)
Query: 223 AIAKPSTMVQRMQNIKKLR----------GHRVAVYCAIFDVSGRYVISGSDDRLVKIWS 272
++ K T+V + Q + ++R GH AV C F G+ + SGS D V++W
Sbjct: 78 SVEKVLTIVYQQQAVFRIRPVNRCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWD 137
Query: 273 METAFCLASCRGHEGDITDMXXXXXXXXXXXXXXDFVIRVWRLPDG-MPISVLRGHTGAV 331
+ T L +C+GH+ + + I W G + S L GH +
Sbjct: 138 LYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWI 197
Query: 332 NTIAFSP--RPTAVYQLLSSSDDGTCRIWDARNSHNPRIYVPRPSDSVTGKGNAPPANLP 389
I++ P + + ++SS DG RIWD I + + ++G
Sbjct: 198 TGISWEPVHLSSPCRRFVTSSKDGDARIWD--------ITLKKSIICLSG---------- 239
Query: 390 SSSNGQHSYQILCCAYNANGTVFVTGSADTFARVWSALK 428
H+ + C + +G ++ TGS D ++W +
Sbjct: 240 ------HTLAVTCVKWGGDGIIY-TGSQDCTIKMWETTQ 271
>AT5G67320.1 | Symbols: HOS15 | WD-40 repeat family protein |
chr5:26857268-26860974 FORWARD LENGTH=613
Length = 613
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 81/217 (37%), Gaps = 33/217 (15%)
Query: 237 IKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGDITDMXXXX 296
I L H+ ++ ++ G Y+++GS DR +W ++ H G D+
Sbjct: 358 ISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDV-DWR 416
Query: 297 XXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSDDGTCR 356
D +I + ++ + P GH G VN + + P + L S SDD T +
Sbjct: 417 NNVSFATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSL---LASCSDDSTAK 473
Query: 357 IWDARNS--------HNPRIYVPRPSDSVTGKGN--------------------APPANL 388
IW+ + S H IY R S + G N A +
Sbjct: 474 IWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKM 533
Query: 389 PSSSNGQHSYQILCCAYNANGTVFVTGSADTFARVWS 425
S NG H + A++ NG +GS D +WS
Sbjct: 534 LCSFNG-HREPVYSLAFSPNGEYIASGSLDKSIHIWS 569
>AT4G15900.1 | Symbols: PRL1 | pleiotropic regulatory locus 1 |
chr4:9023775-9027443 FORWARD LENGTH=486
Length = 486
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 51/128 (39%), Gaps = 3/128 (2%)
Query: 235 QNIKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGDITDMXX 294
+N + ++GH V FD S + +GS DR +KIW + T + GH + +
Sbjct: 167 KNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAV 226
Query: 295 XXXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSDDGT 354
D ++ W L I GH V +A P + LL+ D
Sbjct: 227 SNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHP---TLDVLLTGGRDSV 283
Query: 355 CRIWDARN 362
CR+WD R
Sbjct: 284 CRVWDIRT 291
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 51/122 (41%), Gaps = 3/122 (2%)
Query: 240 LRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGDITDMXXXXXXX 299
L GH V Y+ S DD+ VK W +E + S GH + +
Sbjct: 214 LTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLD 273
Query: 300 XXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSDDGTCRIWD 359
D V RVW + M I L GH V ++ F+ RPT Q+++ S D T + WD
Sbjct: 274 VLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSV-FT-RPTDP-QVVTGSHDTTIKFWD 330
Query: 360 AR 361
R
Sbjct: 331 LR 332
>AT3G44530.1 | Symbols: HIRA | homolog of histone chaperone HIRA |
chr3:16116026-16121247 FORWARD LENGTH=1058
Length = 1058
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 60/139 (43%), Gaps = 20/139 (14%)
Query: 237 IKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKI-----WSMETAF------------CL 279
+ LR H +V C + + RYV SGSDD++++I S T F +
Sbjct: 59 LATLRDHFGSVNCVRWAKNSRYVASGSDDQVIQIHERKPGSGTTEFGSGEAPDVENWKAV 118
Query: 280 ASCRGHEGDITDMXXXXXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPR 339
+ RGH D+ D+ D + +W + GM +VLRGH V + + P
Sbjct: 119 MTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPI 178
Query: 340 PTAVYQLLSSSDDGTCRIW 358
+ + S SDD T IW
Sbjct: 179 GSFIA---SQSDDKTVIIW 194
>AT5G64730.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:25873146-25875021 FORWARD LENGTH=299
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 3/123 (2%)
Query: 240 LRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGDITDMXXXXXXX 299
L+GH AV A F+ G Y ++ DR +++W+ + + + H ++ D+
Sbjct: 14 LKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNA 73
Query: 300 XXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSDDGTCRIWD 359
D + W + G I RGH G VN + F+ + V +S+ D + R+WD
Sbjct: 74 KFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVV---VSAGFDRSLRVWD 130
Query: 360 ARN 362
R+
Sbjct: 131 CRS 133
>AT1G73720.1 | Symbols: SMU1 | transducin family protein / WD-40
repeat family protein | chr1:27725059-27729722 FORWARD
LENGTH=511
Length = 511
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 3/131 (2%)
Query: 243 HRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGDITDMXXXXXXXXXX 302
H V C F + SGS D +KIW + T C+ H +T +
Sbjct: 262 HDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLL 321
Query: 303 XXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSDDGTCRIWDARN 362
D R+ L G + RGHT VN F+ + +++++S D T ++WD++
Sbjct: 322 STSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGS---RIITASSDCTVKVWDSKT 378
Query: 363 SHNPRIYVPRP 373
+ + + P P
Sbjct: 379 TDCLQTFKPPP 389
>AT3G44530.2 | Symbols: HIRA | homolog of histone chaperone HIRA |
chr3:16116026-16121247 FORWARD LENGTH=1040
Length = 1040
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 60/139 (43%), Gaps = 20/139 (14%)
Query: 237 IKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKI-----WSMETAF------------CL 279
+ LR H +V C + + RYV SGSDD++++I S T F +
Sbjct: 59 LATLRDHFGSVNCVRWAKNSRYVASGSDDQVIQIHERKPGSGTTEFGSGEAPDVENWKAV 118
Query: 280 ASCRGHEGDITDMXXXXXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPR 339
+ RGH D+ D+ D + +W + GM +VLRGH V + + P
Sbjct: 119 MTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPI 178
Query: 340 PTAVYQLLSSSDDGTCRIW 358
+ + S SDD T IW
Sbjct: 179 GSFIA---SQSDDKTVIIW 194
>AT5G08390.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:2701448-2706910 FORWARD LENGTH=839
Length = 839
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 3/129 (2%)
Query: 231 VQRMQNIKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGDIT 290
++ + ++ L GHR F G + SGS D +KIW + C+ + +GH +
Sbjct: 88 LEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVN 147
Query: 291 DMXXXXXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSS 350
+ D V++VW L G + + H G + ++ F P + L + S
Sbjct: 148 VLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHE---FLLATGS 204
Query: 351 DDGTCRIWD 359
D T + WD
Sbjct: 205 ADKTVKFWD 213
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 58/138 (42%), Gaps = 10/138 (7%)
Query: 222 YAIAKPSTMVQRMQNIKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLAS 281
+AI KP+ ++ L GH + FD S V +G+ +K+W +E A + +
Sbjct: 44 WAIGKPNAILS-------LYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRT 96
Query: 282 CRGHEGDITDMXXXXXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPT 341
GH + + D +++W + I +GHT VN + F+P
Sbjct: 97 LTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDG- 155
Query: 342 AVYQLLSSSDDGTCRIWD 359
++S +D ++WD
Sbjct: 156 --RWIVSGGEDNVVKVWD 171
>AT1G61210.2 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:22564785-22571555 FORWARD LENGTH=1179
Length = 1179
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 3/129 (2%)
Query: 231 VQRMQNIKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGDIT 290
V+ + ++ GHR F G ++ SGS D +KIW + C+ + +GH I+
Sbjct: 87 VEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGIS 146
Query: 291 DMXXXXXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSS 350
+ D V++VW L G + + H G + ++ F P + L + S
Sbjct: 147 TIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHP---LEFLLATGS 203
Query: 351 DDGTCRIWD 359
D T + WD
Sbjct: 204 ADRTVKFWD 212
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 69/196 (35%), Gaps = 28/196 (14%)
Query: 230 MVQRMQNIKKLRGHRVAVYC-AIFDVSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGD 288
M +R +++ H V C +I + R I+G DD V +W++ L S GH
Sbjct: 1 MAKRGYKLQEFLAHSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKPTSLMSLCGHTSA 60
Query: 289 ITDMXXXXXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLS 348
+ + VI++W + + + GH + + F P L S
Sbjct: 61 VDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEF---LAS 117
Query: 349 SSDDGTCRIWDARNSHNPRIYVPRPSDSVTGKGNAPPANLPSSSNGQHSYQILCCAYNAN 408
S D +IWD R + Y KG HS I + +
Sbjct: 118 GSSDANLKIWDIRKKGCIQTY----------KG--------------HSRGISTIRFTPD 153
Query: 409 GTVFVTGSADTFARVW 424
G V+G D +VW
Sbjct: 154 GRWVVSGGLDNVVKVW 169
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Query: 222 YAIAKPSTMVQRMQNIKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLAS 281
+AI KP++++ L GH AV FD + V++G+ ++K+W +E A + +
Sbjct: 43 WAIGKPTSLMS-------LCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRA 95
Query: 282 CRGHEGDITDMXXXXXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPT 341
GH + + + D +++W + I +GH+ ++TI F+P
Sbjct: 96 FTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGR 155
Query: 342 AVYQLLSSSDDGTCRIWD 359
V +S D ++WD
Sbjct: 156 WV---VSGGLDNVVKVWD 170
>AT1G61210.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:22564785-22571555 FORWARD LENGTH=1181
Length = 1181
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 3/129 (2%)
Query: 231 VQRMQNIKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGDIT 290
V+ + ++ GHR F G ++ SGS D +KIW + C+ + +GH I+
Sbjct: 87 VEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGIS 146
Query: 291 DMXXXXXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSS 350
+ D V++VW L G + + H G + ++ F P + L + S
Sbjct: 147 TIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHP---LEFLLATGS 203
Query: 351 DDGTCRIWD 359
D T + WD
Sbjct: 204 ADRTVKFWD 212
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 69/196 (35%), Gaps = 28/196 (14%)
Query: 230 MVQRMQNIKKLRGHRVAVYC-AIFDVSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGD 288
M +R +++ H V C +I + R I+G DD V +W++ L S GH
Sbjct: 1 MAKRGYKLQEFLAHSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKPTSLMSLCGHTSA 60
Query: 289 ITDMXXXXXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLS 348
+ + VI++W + + + GH + + F P L S
Sbjct: 61 VDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEF---LAS 117
Query: 349 SSDDGTCRIWDARNSHNPRIYVPRPSDSVTGKGNAPPANLPSSSNGQHSYQILCCAYNAN 408
S D +IWD R + Y KG HS I + +
Sbjct: 118 GSSDANLKIWDIRKKGCIQTY----------KG--------------HSRGISTIRFTPD 153
Query: 409 GTVFVTGSADTFARVW 424
G V+G D +VW
Sbjct: 154 GRWVVSGGLDNVVKVW 169
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Query: 222 YAIAKPSTMVQRMQNIKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLAS 281
+AI KP++++ L GH AV FD + V++G+ ++K+W +E A + +
Sbjct: 43 WAIGKPTSLMS-------LCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRA 95
Query: 282 CRGHEGDITDMXXXXXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPT 341
GH + + + D +++W + I +GH+ ++TI F+P
Sbjct: 96 FTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGR 155
Query: 342 AVYQLLSSSDDGTCRIWD 359
V +S D ++WD
Sbjct: 156 WV---VSGGLDNVVKVWD 170
>AT4G34460.4 | Symbols: AGB1, ELK4, ATAGB1 | GTP binding protein
beta 1 | chr4:16477393-16479266 REVERSE LENGTH=372
Length = 372
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 86/229 (37%), Gaps = 50/229 (21%)
Query: 238 KKLRGHRVAVYCAIF-DVSGRYVISGSDDRLVKIWSMETA-----FCLASCRGHEGDITD 291
+ L GHR V C + ++I+ S D+ +W + T F GH D+
Sbjct: 145 RMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLS 204
Query: 292 MXXXXXX-XXXXXXXXDFVIRVWRL-PDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSS 349
+ D R+W + GH G VNT+ F P Y+ +
Sbjct: 205 VSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDG---YRFGTG 261
Query: 350 SDDGTCRIWDARNSHNPRIYVPRPSDSVTGKG-NAPPANLPSSSNGQ------------- 395
SDDGTCR++D R H ++Y P G G N P ++ S +G+
Sbjct: 262 SDDGTCRLYDIRTGHQLQVYQPH------GDGENGPVTSIAFSVSGRLLFAGYASNNTCY 315
Query: 396 -------------------HSYQILCCAYNANGTVFVTGSADTFARVWS 425
H +I C +A+G+ TGS D+ ++W+
Sbjct: 316 VWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTGSWDSNLKIWA 364
>AT4G34460.1 | Symbols: AGB1, ELK4, ATAGB1 | GTP binding protein
beta 1 | chr4:16477393-16479266 REVERSE LENGTH=377
Length = 377
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 86/229 (37%), Gaps = 50/229 (21%)
Query: 238 KKLRGHRVAVYCAIF-DVSGRYVISGSDDRLVKIWSMETA-----FCLASCRGHEGDITD 291
+ L GHR V C + ++I+ S D+ +W + T F GH D+
Sbjct: 150 RMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLS 209
Query: 292 MXXXXXX-XXXXXXXXDFVIRVWRL-PDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSS 349
+ D R+W + GH G VNT+ F P Y+ +
Sbjct: 210 VSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDG---YRFGTG 266
Query: 350 SDDGTCRIWDARNSHNPRIYVPRPSDSVTGKG-NAPPANLPSSSNGQ------------- 395
SDDGTCR++D R H ++Y P G G N P ++ S +G+
Sbjct: 267 SDDGTCRLYDIRTGHQLQVYQPH------GDGENGPVTSIAFSVSGRLLFAGYASNNTCY 320
Query: 396 -------------------HSYQILCCAYNANGTVFVTGSADTFARVWS 425
H +I C +A+G+ TGS D+ ++W+
Sbjct: 321 VWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTGSWDSNLKIWA 369
>AT4G34460.2 | Symbols: AGB1, ELK4, ATAGB1 | GTP binding protein
beta 1 | chr4:16477393-16478769 REVERSE LENGTH=315
Length = 315
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 86/229 (37%), Gaps = 50/229 (21%)
Query: 238 KKLRGHRVAVYCAIF-DVSGRYVISGSDDRLVKIWSMETA-----FCLASCRGHEGDITD 291
+ L GHR V C + ++I+ S D+ +W + T F GH D+
Sbjct: 88 RMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLS 147
Query: 292 MXXXXXX-XXXXXXXXDFVIRVWRL-PDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSS 349
+ D R+W + GH G VNT+ F P Y+ +
Sbjct: 148 VSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDG---YRFGTG 204
Query: 350 SDDGTCRIWDARNSHNPRIYVPRPSDSVTGKG-NAPPANLPSSSNGQ------------- 395
SDDGTCR++D R H ++Y P G G N P ++ S +G+
Sbjct: 205 SDDGTCRLYDIRTGHQLQVYQPH------GDGENGPVTSIAFSVSGRLLFAGYASNNTCY 258
Query: 396 -------------------HSYQILCCAYNANGTVFVTGSADTFARVWS 425
H +I C +A+G+ TGS D+ ++W+
Sbjct: 259 VWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTGSWDSNLKIWA 307
>AT4G34460.3 | Symbols: AGB1, ELK4, ATAGB1 | GTP binding protein
beta 1 | chr4:16477586-16479266 REVERSE LENGTH=347
Length = 347
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 76/185 (41%), Gaps = 22/185 (11%)
Query: 238 KKLRGHRVAVYCAIF-DVSGRYVISGSDDRLVKIWSMETA-----FCLASCRGHEGDITD 291
+ L GHR V C + ++I+ S D+ +W + T F GH D+
Sbjct: 150 RMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLS 209
Query: 292 MXXXXXX-XXXXXXXXDFVIRVWRL-PDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSS 349
+ D R+W + GH G VNT+ F P Y+ +
Sbjct: 210 VSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDG---YRFGTG 266
Query: 350 SDDGTCRIWDARNSHNPRIYVPRPSDSVTGKG-NAPPANLPSSSNGQHSYQILCCAYNAN 408
SDDGTCR++D R H ++Y P G G N P ++ S +G ++L Y +N
Sbjct: 267 SDDGTCRLYDIRTGHQLQVYQPH------GDGENGPVTSIAFSVSG----RLLFAGYASN 316
Query: 409 GTVFV 413
T +V
Sbjct: 317 NTCYV 321
>AT1G79990.3 | Symbols: | structural molecules |
chr1:30085910-30091949 FORWARD LENGTH=920
Length = 920
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 73/195 (37%), Gaps = 27/195 (13%)
Query: 234 MQNIKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAF-CLASCRGHEGDITDM 292
M IK H + C + YV+S SDD L+K+W E + C GH + +
Sbjct: 89 MDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYVMQV 148
Query: 293 XXX-XXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSD 351
D I++W L P L H VN + + Y L++ SD
Sbjct: 149 TFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPY-LITGSD 207
Query: 352 DGTCRIWDARNSHNPRIYVPRPSDSVTGKGNAPPANLPSSSNGQHSYQILCCAYNANGTV 411
D T ++WD + S T +G H++ + +++ +
Sbjct: 208 DHTAKVWDYQTK----------SCVQTLEG--------------HTHNVSAVSFHPELPI 243
Query: 412 FVTGSADTFARVWSA 426
+TGS D R+W A
Sbjct: 244 IITGSEDGTVRIWHA 258
>AT1G79990.5 | Symbols: | structural molecules |
chr1:30085910-30091949 FORWARD LENGTH=912
Length = 912
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 73/195 (37%), Gaps = 27/195 (13%)
Query: 234 MQNIKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAF-CLASCRGHEGDITDM 292
M IK H + C + YV+S SDD L+K+W E + C GH + +
Sbjct: 89 MDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYVMQV 148
Query: 293 XXX-XXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSD 351
D I++W L P L H VN + + Y L++ SD
Sbjct: 149 TFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPY-LITGSD 207
Query: 352 DGTCRIWDARNSHNPRIYVPRPSDSVTGKGNAPPANLPSSSNGQHSYQILCCAYNANGTV 411
D T ++WD + S T +G H++ + +++ +
Sbjct: 208 DHTAKVWDYQTK----------SCVQTLEG--------------HTHNVSAVSFHPELPI 243
Query: 412 FVTGSADTFARVWSA 426
+TGS D R+W A
Sbjct: 244 IITGSEDGTVRIWHA 258
>AT1G79990.1 | Symbols: | structural molecules |
chr1:30084522-30091949 FORWARD LENGTH=1135
Length = 1135
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 73/195 (37%), Gaps = 27/195 (13%)
Query: 234 MQNIKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAF-CLASCRGHEGDITDM 292
M IK H + C + YV+S SDD L+K+W E + C GH + +
Sbjct: 304 MDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYVMQV 363
Query: 293 XXX-XXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSD 351
D I++W L P L H VN + + Y L++ SD
Sbjct: 364 TFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPY-LITGSD 422
Query: 352 DGTCRIWDARNSHNPRIYVPRPSDSVTGKGNAPPANLPSSSNGQHSYQILCCAYNANGTV 411
D T ++WD + S T +G H++ + +++ +
Sbjct: 423 DHTAKVWDYQTK----------SCVQTLEG--------------HTHNVSAVSFHPELPI 458
Query: 412 FVTGSADTFARVWSA 426
+TGS D R+W A
Sbjct: 459 IITGSEDGTVRIWHA 473
>AT1G49040.1 | Symbols: SCD1 | stomatal cytokinesis defective / SCD1
protein (SCD1) | chr1:18139419-18148826 REVERSE
LENGTH=1187
Length = 1187
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 73/193 (37%), Gaps = 30/193 (15%)
Query: 232 QRMQNIKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGDITD 291
Q Q +++L+GH V C +SG V++ + D VK+W + T C+A+ I
Sbjct: 927 QTTQLLEELKGHDSQVSCVKM-LSGERVLTAAHDGTVKMWDVRTDMCVATVGRCSSAILS 985
Query: 292 MXXXXXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSD 351
+ D V +W + G + L+GHT + +I L++ SD
Sbjct: 986 LEYDDSTGILAAAGRDTVANIWDIRSGKQMHKLKGHTKWIRSIRMVED-----TLITGSD 1040
Query: 352 DGTCRIWDARNSHNPRIYVPRPSDSVTGKGNAPPANLPSSSNGQHSYQILCCAYNANGTV 411
D T R+W V R S +A P + Y+
Sbjct: 1041 DWTARVWS----------VSRGSCDAVLACHAGP--------------VQSVEYSPFDKG 1076
Query: 412 FVTGSADTFARVW 424
+TGSAD R W
Sbjct: 1077 IITGSADGLLRFW 1089
>AT1G11160.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:3733406-3739363 FORWARD LENGTH=1021
Length = 1021
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 55/129 (42%), Gaps = 3/129 (2%)
Query: 231 VQRMQNIKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGDIT 290
++ + ++ GHR F G ++ SGS D +++W C+ + +GH I+
Sbjct: 87 LEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGIS 146
Query: 291 DMXXXXXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSS 350
+ D V++VW L G + + H G + ++ F P + L + S
Sbjct: 147 TIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHP---LEFLLATGS 203
Query: 351 DDGTCRIWD 359
D T + WD
Sbjct: 204 ADRTVKFWD 212
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 70/196 (35%), Gaps = 28/196 (14%)
Query: 230 MVQRMQNIKKLRGHRVAVYC-AIFDVSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGD 288
M +R +++ H V C +I + R +++G DD V +WS+ S GH
Sbjct: 1 MAKRGYKLQEFVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSP 60
Query: 289 ITDMXXXXXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLS 348
+ + VI++W L + + GH + + F P L S
Sbjct: 61 VDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEF---LAS 117
Query: 349 SSDDGTCRIWDARNSHNPRIYVPRPSDSVTGKGNAPPANLPSSSNGQHSYQILCCAYNAN 408
S D R+WD R + Y KG H+ I ++ +
Sbjct: 118 GSSDTNLRVWDTRKKGCIQTY----------KG--------------HTRGISTIEFSPD 153
Query: 409 GTVFVTGSADTFARVW 424
G V+G D +VW
Sbjct: 154 GRWVVSGGLDNVVKVW 169
>AT3G15980.1 | Symbols: | Coatomer, beta' subunit |
chr3:5411699-5418313 REVERSE LENGTH=909
Length = 909
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 72/195 (36%), Gaps = 27/195 (13%)
Query: 234 MQNIKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAF-CLASCRGHEGDITDM 292
M +K H + C + YV+S SDD L+K+W E + C GH + +
Sbjct: 89 MDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQV 148
Query: 293 XXX-XXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSD 351
D I++W L P L H VN + + Y L++ SD
Sbjct: 149 VFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPY-LITGSD 207
Query: 352 DGTCRIWDARNSHNPRIYVPRPSDSVTGKGNAPPANLPSSSNGQHSYQILCCAYNANGTV 411
D T ++WD + + + +G H++ + ++ +
Sbjct: 208 DHTAKVWDYQTK-----------------------SCVQTLDG-HTHNVSAVCFHPELPI 243
Query: 412 FVTGSADTFARVWSA 426
+TGS D R+W A
Sbjct: 244 IITGSEDGTVRIWHA 258
>AT3G15980.4 | Symbols: | Coatomer, beta' subunit |
chr3:5411699-5418313 REVERSE LENGTH=914
Length = 914
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 72/195 (36%), Gaps = 27/195 (13%)
Query: 234 MQNIKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAF-CLASCRGHEGDITDM 292
M +K H + C + YV+S SDD L+K+W E + C GH + +
Sbjct: 89 MDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQV 148
Query: 293 XXX-XXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSD 351
D I++W L P L H VN + + Y L++ SD
Sbjct: 149 VFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPY-LITGSD 207
Query: 352 DGTCRIWDARNSHNPRIYVPRPSDSVTGKGNAPPANLPSSSNGQHSYQILCCAYNANGTV 411
D T ++WD + + + +G H++ + ++ +
Sbjct: 208 DHTAKVWDYQTK-----------------------SCVQTLDG-HTHNVSAVCFHPELPI 243
Query: 412 FVTGSADTFARVWSA 426
+TGS D R+W A
Sbjct: 244 IITGSEDGTVRIWHA 258
>AT1G52360.1 | Symbols: | Coatomer, beta' subunit |
chr1:19499282-19505397 FORWARD LENGTH=926
Length = 926
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 72/195 (36%), Gaps = 27/195 (13%)
Query: 234 MQNIKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAF-CLASCRGHEGDITDM 292
M +K H + C + YV+S SDD L+K+W E + C GH + +
Sbjct: 89 MDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQV 148
Query: 293 XXX-XXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSD 351
D I++W L P L H VN + + Y L++ SD
Sbjct: 149 TFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPY-LITGSD 207
Query: 352 DGTCRIWDARNSHNPRIYVPRPSDSVTGKGNAPPANLPSSSNGQHSYQILCCAYNANGTV 411
D T ++WD + + T +G H++ + ++ +
Sbjct: 208 DHTAKVWDYQTKSCVQ----------TLEG--------------HTHNVSAVCFHPELPI 243
Query: 412 FVTGSADTFARVWSA 426
+TGS D R+W A
Sbjct: 244 IITGSEDGTVRIWHA 258
>AT3G15980.5 | Symbols: | Coatomer, beta' subunit |
chr3:5412015-5418313 REVERSE LENGTH=930
Length = 930
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 72/195 (36%), Gaps = 27/195 (13%)
Query: 234 MQNIKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAF-CLASCRGHEGDITDM 292
M +K H + C + YV+S SDD L+K+W E + C GH + +
Sbjct: 89 MDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQV 148
Query: 293 XXX-XXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSD 351
D I++W L P L H VN + + Y L++ SD
Sbjct: 149 VFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPY-LITGSD 207
Query: 352 DGTCRIWDARNSHNPRIYVPRPSDSVTGKGNAPPANLPSSSNGQHSYQILCCAYNANGTV 411
D T ++WD + + + +G H++ + ++ +
Sbjct: 208 DHTAKVWDYQTK-----------------------SCVQTLDG-HTHNVSAVCFHPELPI 243
Query: 412 FVTGSADTFARVWSA 426
+TGS D R+W A
Sbjct: 244 IITGSEDGTVRIWHA 258
>AT3G15980.3 | Symbols: | Coatomer, beta' subunit |
chr3:5412015-5418313 REVERSE LENGTH=918
Length = 918
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 72/195 (36%), Gaps = 27/195 (13%)
Query: 234 MQNIKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAF-CLASCRGHEGDITDM 292
M +K H + C + YV+S SDD L+K+W E + C GH + +
Sbjct: 89 MDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQV 148
Query: 293 XXX-XXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSD 351
D I++W L P L H VN + + Y L++ SD
Sbjct: 149 VFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPY-LITGSD 207
Query: 352 DGTCRIWDARNSHNPRIYVPRPSDSVTGKGNAPPANLPSSSNGQHSYQILCCAYNANGTV 411
D T ++WD + + + +G H++ + ++ +
Sbjct: 208 DHTAKVWDYQTK-----------------------SCVQTLDG-HTHNVSAVCFHPELPI 243
Query: 412 FVTGSADTFARVWSA 426
+TGS D R+W A
Sbjct: 244 IITGSEDGTVRIWHA 258
>AT3G15980.2 | Symbols: | Coatomer, beta' subunit |
chr3:5412015-5418313 REVERSE LENGTH=918
Length = 918
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 72/195 (36%), Gaps = 27/195 (13%)
Query: 234 MQNIKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAF-CLASCRGHEGDITDM 292
M +K H + C + YV+S SDD L+K+W E + C GH + +
Sbjct: 89 MDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQV 148
Query: 293 XXX-XXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSD 351
D I++W L P L H VN + + Y L++ SD
Sbjct: 149 VFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPY-LITGSD 207
Query: 352 DGTCRIWDARNSHNPRIYVPRPSDSVTGKGNAPPANLPSSSNGQHSYQILCCAYNANGTV 411
D T ++WD + + + +G H++ + ++ +
Sbjct: 208 DHTAKVWDYQTK-----------------------SCVQTLDG-HTHNVSAVCFHPELPI 243
Query: 412 FVTGSADTFARVWSA 426
+TGS D R+W A
Sbjct: 244 IITGSEDGTVRIWHA 258
>AT2G32700.7 | Symbols: LUH | LEUNIG_homolog |
chr2:13867235-13871844 FORWARD LENGTH=806
Length = 806
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 50/121 (41%), Gaps = 3/121 (2%)
Query: 240 LRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGDITDMXXXXXXX 299
+R V C F G+ + S D+ V IW+MET ++ H ITD+
Sbjct: 525 IRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNST 584
Query: 300 XXXXXXXDFVIRVWRLPD-GMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSDDGTCRIW 358
D I++W D G + + GH V +I F P+ T + L S + R W
Sbjct: 585 QLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTEL--LCSCDSNNDIRFW 642
Query: 359 D 359
D
Sbjct: 643 D 643
>AT2G32700.2 | Symbols: LUH | LEUNIG_homolog |
chr2:13867235-13871844 FORWARD LENGTH=787
Length = 787
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 50/121 (41%), Gaps = 3/121 (2%)
Query: 240 LRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGDITDMXXXXXXX 299
+R V C F G+ + S D+ V IW+MET ++ H ITD+
Sbjct: 506 IRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNST 565
Query: 300 XXXXXXXDFVIRVWRLPD-GMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSDDGTCRIW 358
D I++W D G + + GH V +I F P+ T + L S + R W
Sbjct: 566 QLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTEL--LCSCDSNNDIRFW 623
Query: 359 D 359
D
Sbjct: 624 D 624
>AT2G32700.1 | Symbols: LUH | LEUNIG_homolog |
chr2:13867235-13871844 FORWARD LENGTH=787
Length = 787
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 50/121 (41%), Gaps = 3/121 (2%)
Query: 240 LRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGDITDMXXXXXXX 299
+R V C F G+ + S D+ V IW+MET ++ H ITD+
Sbjct: 506 IRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNST 565
Query: 300 XXXXXXXDFVIRVWRLPD-GMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSDDGTCRIW 358
D I++W D G + + GH V +I F P+ T + L S + R W
Sbjct: 566 QLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTEL--LCSCDSNNDIRFW 623
Query: 359 D 359
D
Sbjct: 624 D 624
>AT2G32700.4 | Symbols: LUH | LEUNIG_homolog |
chr2:13867235-13871844 FORWARD LENGTH=787
Length = 787
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 50/121 (41%), Gaps = 3/121 (2%)
Query: 240 LRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGDITDMXXXXXXX 299
+R V C F G+ + S D+ V IW+MET ++ H ITD+
Sbjct: 506 IRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNST 565
Query: 300 XXXXXXXDFVIRVWRLPD-GMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSDDGTCRIW 358
D I++W D G + + GH V +I F P+ T + L S + R W
Sbjct: 566 QLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTEL--LCSCDSNNDIRFW 623
Query: 359 D 359
D
Sbjct: 624 D 624
>AT2G32700.5 | Symbols: LUH | LEUNIG_homolog |
chr2:13867235-13871844 FORWARD LENGTH=787
Length = 787
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 50/121 (41%), Gaps = 3/121 (2%)
Query: 240 LRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGDITDMXXXXXXX 299
+R V C F G+ + S D+ V IW+MET ++ H ITD+
Sbjct: 506 IRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNST 565
Query: 300 XXXXXXXDFVIRVWRLPD-GMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSDDGTCRIW 358
D I++W D G + + GH V +I F P+ T + L S + R W
Sbjct: 566 QLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTEL--LCSCDSNNDIRFW 623
Query: 359 D 359
D
Sbjct: 624 D 624
>AT2G32700.3 | Symbols: LUH | LEUNIG_homolog |
chr2:13867235-13871844 FORWARD LENGTH=787
Length = 787
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 50/121 (41%), Gaps = 3/121 (2%)
Query: 240 LRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGDITDMXXXXXXX 299
+R V C F G+ + S D+ V IW+MET ++ H ITD+
Sbjct: 506 IRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNST 565
Query: 300 XXXXXXXDFVIRVWRLPD-GMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSDDGTCRIW 358
D I++W D G + + GH V +I F P+ T + L S + R W
Sbjct: 566 QLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTEL--LCSCDSNNDIRFW 623
Query: 359 D 359
D
Sbjct: 624 D 624
>AT2G32700.6 | Symbols: LUH | LEUNIG_homolog |
chr2:13867235-13871844 FORWARD LENGTH=785
Length = 785
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 50/121 (41%), Gaps = 3/121 (2%)
Query: 240 LRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGDITDMXXXXXXX 299
+R V C F G+ + S D+ V IW+MET ++ H ITD+
Sbjct: 504 IRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNST 563
Query: 300 XXXXXXXDFVIRVWRLPD-GMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSDDGTCRIW 358
D I++W D G + + GH V +I F P+ T + L S + R W
Sbjct: 564 QLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTEL--LCSCDSNNDIRFW 621
Query: 359 D 359
D
Sbjct: 622 D 622
>AT1G52360.2 | Symbols: | Coatomer, beta' subunit |
chr1:19499420-19505397 FORWARD LENGTH=970
Length = 970
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 72/195 (36%), Gaps = 27/195 (13%)
Query: 234 MQNIKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAF-CLASCRGHEGDITDM 292
M +K H + C + YV+S SDD L+K+W E + C GH + +
Sbjct: 133 MDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQV 192
Query: 293 XXX-XXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSD 351
D I++W L P L H VN + + Y L++ SD
Sbjct: 193 TFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPY-LITGSD 251
Query: 352 DGTCRIWDARNSHNPRIYVPRPSDSVTGKGNAPPANLPSSSNGQHSYQILCCAYNANGTV 411
D T ++WD + + T +G H++ + ++ +
Sbjct: 252 DHTAKVWDYQTKSCVQ----------TLEG--------------HTHNVSAVCFHPELPI 287
Query: 412 FVTGSADTFARVWSA 426
+TGS D R+W A
Sbjct: 288 IITGSEDGTVRIWHA 302
>AT5G23430.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:7894073-7899862 REVERSE LENGTH=837
Length = 837
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 10/138 (7%)
Query: 222 YAIAKPSTMVQRMQNIKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLAS 281
+AI KP+ ++ L GH + FD S V +G+ +K+W +E A + +
Sbjct: 44 WAIGKPNAILS-------LYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRT 96
Query: 282 CRGHEGDITDMXXXXXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPT 341
GH + + D +++W + I +GHT VN + F+P
Sbjct: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGR 156
Query: 342 AVYQLLSSSDDGTCRIWD 359
V +S +D ++WD
Sbjct: 157 WV---VSGGEDNIVKVWD 171
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 41/102 (40%)
Query: 237 IKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGDITDMXXXX 296
I +GH V F GR+V+SG +D +VK+W + L + HEG I +
Sbjct: 136 IHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHP 195
Query: 297 XXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSP 338
D ++ W L I T V ++F+P
Sbjct: 196 HEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNP 237
>AT5G23430.2 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:7894073-7899862 REVERSE LENGTH=836
Length = 836
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 10/138 (7%)
Query: 222 YAIAKPSTMVQRMQNIKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLAS 281
+AI KP+ ++ L GH + FD S V +G+ +K+W +E A + +
Sbjct: 44 WAIGKPNAILS-------LYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRT 96
Query: 282 CRGHEGDITDMXXXXXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPT 341
GH + + D +++W + I +GHT VN + F+P
Sbjct: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGR 156
Query: 342 AVYQLLSSSDDGTCRIWD 359
V +S +D ++WD
Sbjct: 157 WV---VSGGEDNIVKVWD 171
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 41/102 (40%)
Query: 237 IKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGDITDMXXXX 296
I +GH V F GR+V+SG +D +VK+W + L + HEG I +
Sbjct: 136 IHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHP 195
Query: 297 XXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSP 338
D ++ W L I T V ++F+P
Sbjct: 196 HEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNP 237
>AT3G18950.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:6536900-6538321 FORWARD LENGTH=473
Length = 473
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 90/227 (39%), Gaps = 38/227 (16%)
Query: 206 GGFTKHHRAPSIRSACYAIAKPSTMVQ--RMQNIKKLRGHRVAVYCAIFDVSGRYVISGS 263
GG+++ P+++ P V+ R +N+ K+R H AV C + + SGS
Sbjct: 210 GGYSRIGSLPTLKEFLTKSVNPKNYVEVRRRKNVLKIR-HYDAVSCLSLNEELGLLYSGS 268
Query: 264 DDRLVKIWSMETAFCLASCRGHEGDITDMXXXXXXXXXXXXXXDFVIRVWRLP------D 317
D+ +K+W + + CL S + H+ D + D ++VW+
Sbjct: 269 WDKTLKVWRLSDSKCLESIQAHD-DAINTVAAGFDDLLFTGSADGTLKVWKRELQGKGTK 327
Query: 318 GMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSDDGTCRIWDARNSHNPRIYVPRPSDSV 377
++VL AV +A + VY S DGT W+ + Y+ S
Sbjct: 328 HFLVNVLMKQENAVTALAVNITAAVVY---CGSSDGTVNFWEGQK------YL---SHGG 375
Query: 378 TGKGNAPPANLPSSSNGQHSYQILCCAYNANGTVFVTGSADTFARVW 424
T +G H +LC A A G++ ++G AD VW
Sbjct: 376 TLRG--------------HRLAVLCLA--AAGSLVLSGGADKNICVW 406
>AT1G15440.2 | Symbols: PWP2 | periodic tryptophan protein 2 |
chr1:5306159-5309460 REVERSE LENGTH=860
Length = 860
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 89/238 (37%), Gaps = 42/238 (17%)
Query: 237 IKKLRGHRVAVYCAIFDVSGRYVISGSDDR-LVKIWSMETAFCLASCRGHEGDITDMXXX 295
I L R + A+F+ G ++ G + +W T + +GH D+ +
Sbjct: 299 IHLLSISRQKLTTAVFNERGNWLTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYS 358
Query: 296 XXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSDDGTC 355
D ++VW + G HT AV + F + LLS+S DGT
Sbjct: 359 PDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADN---HSLLSASLDGTV 415
Query: 356 RIWDARNSHNPRIY-VPRPSDSVTGKGNAPPANLPSSSNGQHSYQILCCAYNANGTVFVT 414
R WD + N + Y P P Q + + +G V
Sbjct: 416 RAWDFKRYKNYKTYTTPTPR------------------------QFVSLTADPSGDVVCA 451
Query: 415 GSADTFA-RVWSALKPNNSDSEQPVHEIDLLSGHENDVNYVQFSGCSVASKLVTSDSW 471
G+ D+F VW S++ D+LSGHE V+ + FS ++L+ S SW
Sbjct: 452 GTLDSFEIFVW---------SKKTGQIKDILSGHEAPVHGLMFSPL---TQLLASSSW 497
>AT1G15440.1 | Symbols: PWP2, ATPWP2 | periodic tryptophan protein 2
| chr1:5306159-5309460 REVERSE LENGTH=900
Length = 900
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 90/238 (37%), Gaps = 42/238 (17%)
Query: 237 IKKLRGHRVAVYCAIFDVSGRYVISG-SDDRLVKIWSMETAFCLASCRGHEGDITDMXXX 295
I L R + A+F+ G ++ G + + +W T + +GH D+ +
Sbjct: 339 IHLLSISRQKLTTAVFNERGNWLTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYS 398
Query: 296 XXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSDDGTC 355
D ++VW + G HT AV + F + LLS+S DGT
Sbjct: 399 PDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADN---HSLLSASLDGTV 455
Query: 356 RIWDARNSHNPRIY-VPRPSDSVTGKGNAPPANLPSSSNGQHSYQILCCAYNANGTVFVT 414
R WD + N + Y P P Q + + +G V
Sbjct: 456 RAWDFKRYKNYKTYTTPTPR------------------------QFVSLTADPSGDVVCA 491
Query: 415 GSADTFA-RVWSALKPNNSDSEQPVHEIDLLSGHENDVNYVQFSGCSVASKLVTSDSW 471
G+ D+F VW S++ D+LSGHE V+ + FS ++L+ S SW
Sbjct: 492 GTLDSFEIFVW---------SKKTGQIKDILSGHEAPVHGLMFSPL---TQLLASSSW 537
>AT4G05410.1 | Symbols: YAO | Transducin/WD40 repeat-like
superfamily protein | chr4:2743229-2745521 REVERSE
LENGTH=504
Length = 504
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 102/236 (43%), Gaps = 29/236 (12%)
Query: 231 VQRMQNIKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGDIT 290
V+ ++++ GHR V C F + SGS DR VK+W++E + GH+G+I
Sbjct: 251 VRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWNVEDKAFITENHGHQGEIL 310
Query: 291 DMXXXXXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSS 350
+ D + ++P+ + + R ++ + F + + LS S
Sbjct: 311 AI-DALRKERALTVGRDRTMLYHKVPESTRM-IYRAPASSLESCCF----ISDNEYLSGS 364
Query: 351 DDGTCRIWDA---------RNSHNPRIYVPR--PSDSVTGKGNAPPANLPSSSNGQHSYQ 399
D+GT +W +N+H +P ++ + G+ P N S+N
Sbjct: 365 DNGTVALWGMLKKKPVFVFKNAHQD---IPDGITTNGILENGDHEPVNNNCSANS----W 417
Query: 400 ILCCAYNANGTVFVTGSADTFARVWSALKPNNSDSEQPVHEIDLLSGHENDVNYVQ 455
+ A + + +G+ + F R+W+ +++ +P++E+ L+G N + + +
Sbjct: 418 VNAVATSRGSDLAASGAGNGFVRLWAV----ETNAIRPLYELP-LTGFVNSLAFAK 468
>AT5G13480.2 | Symbols: FY | Transducin/WD40 repeat-like superfamily
protein | chr5:4326638-4331506 REVERSE LENGTH=653
Length = 653
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 4/164 (2%)
Query: 240 LRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGDITDMXXXXXXX 299
L GH V + + ++SG D+LVK+W + L S GH+ + +
Sbjct: 251 LTGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGN 310
Query: 300 XXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSDDGTCRIWD 359
D +I+++ + + RGHT V ++A+ P + +S S DG+ W
Sbjct: 311 WLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYF--VSGSSDGSICHWI 368
Query: 360 ARNSHNPRIYVPRPSD-SVTGKGNAPPANLPSSSNGQHSYQILC 402
+ NP+I +P D SV P L S + H+ + C
Sbjct: 369 VGHE-NPQIEIPNAHDNSVWDLAWHPIGYLLCSGSNDHTTKFWC 411
>AT3G18130.1 | Symbols: RACK1C_AT | receptor for activated C kinase
1C | chr3:6211109-6212371 REVERSE LENGTH=326
Length = 326
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 92/222 (41%), Gaps = 18/222 (8%)
Query: 208 FTKHHRAPSIRSACYAIAKPSTMVQRMQNIKKLRGHRVAVYCAIFDVSGRY--VISGSDD 265
F+ +R S I +T+ + I + GH+ V C F + ++S S D
Sbjct: 113 FSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWD 172
Query: 266 RLVKIWSMETAFCLASCRGHEGDITDMXXXXXXXXXXXXXXDFVIRVWRLPDGMPISVLR 325
+ VK+W+++ S GH G + + D VI +W L +G + L
Sbjct: 173 KTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLE 232
Query: 326 GHTGAVNTIAFSPRPTAVYQLLSSSDDGTCRIWDARN-SHNPRIYVPRPSDSVTGKGNAP 384
+ ++++ FSP Y L +++++ + RIWD + S + V S++ +G
Sbjct: 233 AGS-IIHSLCFSPNR---YWLCAATEN-SIRIWDLESKSVVEDLKVDLKSEAEKNEGGV- 286
Query: 385 PANLPSSSNGQHSYQILCCAYN--ANGTVFVTGSADTFARVW 424
G I C + N A+G+ +G D RVW
Sbjct: 287 -------GTGNQKKVIYCTSLNWSADGSTLFSGYTDGVVRVW 321
>AT1G71840.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr1:27022424-27024380 FORWARD
LENGTH=407
Length = 407
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 7/146 (4%)
Query: 237 IKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLASCRGH----EGDITDM 292
+ GH + V C F G+ + +GSDD + +W+ +T + +GH EG +T +
Sbjct: 190 LNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEG-LTCL 248
Query: 293 XXXXXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSDD 352
D + + + G +S L HT +V + FSP + + D
Sbjct: 249 DINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMD 308
Query: 353 GTCRIWDARNSHNPRIYVPRPSDSVT 378
IWD ++S PR ++ + VT
Sbjct: 309 KKLIIWDLQHS-TPR-FICEHEEGVT 332
>AT5G13480.1 | Symbols: FY | Transducin/WD40 repeat-like superfamily
protein | chr5:4326638-4331557 REVERSE LENGTH=647
Length = 647
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 4/164 (2%)
Query: 240 LRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGDITDMXXXXXXX 299
L GH V + + ++SG D+LVK+W + L S GH+ + +
Sbjct: 245 LTGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGN 304
Query: 300 XXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSSDDGTCRIWD 359
D +I+++ + + RGHT V ++A+ P + +S S DG+ W
Sbjct: 305 WLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYF--VSGSSDGSICHWI 362
Query: 360 ARNSHNPRIYVPRPSD-SVTGKGNAPPANLPSSSNGQHSYQILC 402
+ NP+I +P D SV P L S + H+ + C
Sbjct: 363 VGHE-NPQIEIPNAHDNSVWDLAWHPIGYLLCSGSNDHTTKFWC 405
>AT1G48630.1 | Symbols: RACK1B_AT | receptor for activated C kinase
1B | chr1:17981977-17983268 REVERSE LENGTH=326
Length = 326
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 7/129 (5%)
Query: 235 QNIKKLRGHRVAVYCAIFDVSGRYVISGSDDRLVKIWSM--ETAFCLASCRGHEGDITDM 292
++ ++ GH V F R ++S S DR +K+W+ E + ++ GH+ ++ +
Sbjct: 96 ESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCV 155
Query: 293 XXX--XXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQLLSSS 350
D ++VW L + + L GH+G +NT+A SP + S
Sbjct: 156 RFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLC---ASGG 212
Query: 351 DDGTCRIWD 359
DG +WD
Sbjct: 213 KDGVILLWD 221
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 87/205 (42%), Gaps = 24/205 (11%)
Query: 228 STMVQRMQNIKKLRGHRVAVYCAIFDVSGRY--VISGSDDRLVKIWSMETAFCLASCRGH 285
+T+ + I + GH+ V C F + ++S S D+ VK+W+++ + GH
Sbjct: 133 NTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGH 192
Query: 286 EGDITDMXXXXXXXXXXXXXXDFVIRVWRLPDGMPISVLRGHTGAVNTIAFSPRPTAVYQ 345
G + + D VI +W L +G + L + ++++ FSP Y
Sbjct: 193 SGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGS-IIHSLCFSPNR---YW 248
Query: 346 LLSSSDDGTCRIWDARNS---HNPRIYV---PRPSDSVTGKGNAPPANLPSSSNGQHSYQ 399
L +++++ + RIWD + + ++ + +D TG GN +S N
Sbjct: 249 LCAATEN-SIRIWDLESKSVVEDLKVDLKAEAEKTDGSTGIGNKTKVIYCTSLN------ 301
Query: 400 ILCCAYNANGTVFVTGSADTFARVW 424
++A+G +G D RVW
Sbjct: 302 -----WSADGNTLFSGYTDGVIRVW 321