Miyakogusa Predicted Gene

Lj5g3v1598490.2
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1598490.2 tr|G7IDQ7|G7IDQ7_MEDTR Fat-free-like protein
OS=Medicago truncatula GN=MTR_1g087100 PE=4 SV=1,90.67,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; UNCHARACTERIZED,NULL,CUFF.55559.2
         (210 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G02030.1 | Symbols:  | Vps51/Vps67 family (components of vesi...   251   3e-67
AT4G02030.2 | Symbols:  | Vps51/Vps67 family (components of vesi...   251   3e-67

>AT4G02030.1 | Symbols:  | Vps51/Vps67 family (components of
           vesicular transport) protein | chr4:892262-897175
           FORWARD LENGTH=780
          Length = 780

 Score =  251 bits (640), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 127/197 (64%), Positives = 148/197 (75%), Gaps = 5/197 (2%)

Query: 19  QHKEPREVHMFVDLFLQELEVIGNEVKQILPQSA-RKHRRTDX--XXXXXXXXXNPLREE 75
           +HKEPREVHM+VD+FL ELE +G EVKQ+LPQ   RKH+RTD            N L  +
Sbjct: 584 KHKEPREVHMYVDMFLHELEEVGKEVKQVLPQGTFRKHKRTDSNGSNTTTSSRSNTLHND 643

Query: 76  KLGRSNTQKARSQLLETHLAKLFKQKVEIFTKVEYTQESVVTAIVKFCLKSLQEFVRLHT 135
           K+ RSN+Q+ARSQL ETHLAKLFKQKVEIFTKVE+TQESVVT  VK CLKSLQE+VRL T
Sbjct: 644 KMARSNSQRARSQLFETHLAKLFKQKVEIFTKVEFTQESVVTTTVKLCLKSLQEYVRLQT 703

Query: 136 YNRSGFQQIQLDIQFLRIPIREIVEDEAAIDFLLDEIIIGTAERCXXXXXXXXXXXXXXX 195
           +NRSGFQQIQLDIQFL+ P++E VEDEAAIDFLLDE+I+  +ERC               
Sbjct: 704 FNRSGFQQIQLDIQFLKAPLKEAVEDEAAIDFLLDEVIVAASERCLDVIPLEPPILDKLI 763

Query: 196 QAKLAKTKE--QNTISS 210
           QAKLAK+KE   NT+SS
Sbjct: 764 QAKLAKSKEHNNNTVSS 780


>AT4G02030.2 | Symbols:  | Vps51/Vps67 family (components of
           vesicular transport) protein | chr4:892262-897175
           FORWARD LENGTH=805
          Length = 805

 Score =  251 bits (640), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 127/197 (64%), Positives = 148/197 (75%), Gaps = 5/197 (2%)

Query: 19  QHKEPREVHMFVDLFLQELEVIGNEVKQILPQSA-RKHRRTDX--XXXXXXXXXNPLREE 75
           +HKEPREVHM+VD+FL ELE +G EVKQ+LPQ   RKH+RTD            N L  +
Sbjct: 609 KHKEPREVHMYVDMFLHELEEVGKEVKQVLPQGTFRKHKRTDSNGSNTTTSSRSNTLHND 668

Query: 76  KLGRSNTQKARSQLLETHLAKLFKQKVEIFTKVEYTQESVVTAIVKFCLKSLQEFVRLHT 135
           K+ RSN+Q+ARSQL ETHLAKLFKQKVEIFTKVE+TQESVVT  VK CLKSLQE+VRL T
Sbjct: 669 KMARSNSQRARSQLFETHLAKLFKQKVEIFTKVEFTQESVVTTTVKLCLKSLQEYVRLQT 728

Query: 136 YNRSGFQQIQLDIQFLRIPIREIVEDEAAIDFLLDEIIIGTAERCXXXXXXXXXXXXXXX 195
           +NRSGFQQIQLDIQFL+ P++E VEDEAAIDFLLDE+I+  +ERC               
Sbjct: 729 FNRSGFQQIQLDIQFLKAPLKEAVEDEAAIDFLLDEVIVAASERCLDVIPLEPPILDKLI 788

Query: 196 QAKLAKTKE--QNTISS 210
           QAKLAK+KE   NT+SS
Sbjct: 789 QAKLAKSKEHNNNTVSS 805