Miyakogusa Predicted Gene

Lj5g3v1598460.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1598460.1 Non Chatacterized Hit- tr|A9P0H0|A9P0H0_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,44.21,0.000000000000007,CP12,Domain of unknown function CP12; no
description,Domain of unknown function CP12,CUFF.55589.1
         (131 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G62410.1 | Symbols: CP12-2, CP12 | CP12 domain-containing pro...   129   6e-31
AT2G47400.1 | Symbols: CP12-1, CP12 | CP12 domain-containing pro...   111   1e-25
AT1G76560.1 | Symbols: CP12-3 | CP12 domain-containing protein 3...    83   5e-17

>AT3G62410.1 | Symbols: CP12-2, CP12 | CP12 domain-containing
           protein 2 | chr3:23091006-23091401 FORWARD LENGTH=131
          Length = 131

 Score =  129 bits (324), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 74/136 (54%), Positives = 94/136 (69%), Gaps = 10/136 (7%)

Query: 1   MATIA-GVSLSSPGVLAKGPDSLQKQKPQAIRFPQLLNQRCPAMVRS-DRMVSFQPVRAA 58
           MATIA G+++++  V         + +P  +  P  LN       R+ +RM+  QP++AA
Sbjct: 1   MATIATGLNIATQRVFVT-----SENRPVCLAGPVHLNNSWNLGSRTTNRMMKLQPIKAA 55

Query: 59  PEG-ISGKVEESIKSAEETCSENATSGECAAAWDEVEELSAAASHARDKLKE--TDPLEN 115
           PEG IS  VE+SIK A+ETC+ +  SGEC AAWDEVEELSAAASHARDK K   +DPLE 
Sbjct: 56  PEGGISDVVEKSIKEAQETCAGDPVSGECVAAWDEVEELSAAASHARDKKKADGSDPLEE 115

Query: 116 YCKENPETDECRTYDN 131
           YCK+NPET+ECRTYDN
Sbjct: 116 YCKDNPETNECRTYDN 131


>AT2G47400.1 | Symbols: CP12-1, CP12 | CP12 domain-containing
           protein 1 | chr2:19446889-19447263 FORWARD LENGTH=124
          Length = 124

 Score =  111 bits (277), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 67/134 (50%), Positives = 80/134 (59%), Gaps = 13/134 (9%)

Query: 1   MATIAGVSLSSPGVLAKGPDSLQKQKPQAIRFPQLLNQRCPAMVRSDRMVSFQPVRAAPE 60
           M TIA   L+            +   P  + +P              RMV    V+A  E
Sbjct: 1   MTTIAAAGLNVATPRVVVRPVARVLGPVRLNYPWKFGSM-------KRMVV---VKATSE 50

Query: 61  G-ISGKVEESIKSAEETCSENATSGECAAAWDEVEELSAAASHARDKLKE--TDPLENYC 117
           G IS KVE+SI+ A+ETC+++  SGEC AAWDEVEELSAAASHARDK K   +DPLE YC
Sbjct: 51  GEISEKVEKSIQEAKETCADDPVSGECVAAWDEVEELSAAASHARDKKKAGGSDPLEEYC 110

Query: 118 KENPETDECRTYDN 131
            +NPETDECRTYDN
Sbjct: 111 NDNPETDECRTYDN 124


>AT1G76560.1 | Symbols: CP12-3 | CP12 domain-containing protein 3 |
           chr1:28728285-28728689 FORWARD LENGTH=134
          Length = 134

 Score = 83.2 bits (204), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 42/104 (40%), Positives = 61/104 (58%), Gaps = 2/104 (1%)

Query: 30  IRFPQLLNQRCPAMVRSDRMVSFQPVRAAPEGISGKVEESIKSAEETCSENATSGECAAA 89
           +RF + + ++   M+ +     +   +   E +S  +EE +K A E C     S EC  A
Sbjct: 31  LRFRETVPRQFSLMMVTKATAKYMGTKMREEKLSEMIEEKVKEATEVCEAEEMSEECRVA 90

Query: 90  WDEVEELSAAASHARDKLK--ETDPLENYCKENPETDECRTYDN 131
           WDEVEE+S A +  R KLK    DPLE++C+ENPETDECR Y++
Sbjct: 91  WDEVEEVSQARADLRIKLKLLNQDPLESFCQENPETDECRIYED 134