Miyakogusa Predicted Gene
- Lj5g3v1598340.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1598340.1 Non Chatacterized Hit- tr|I1L7N5|I1L7N5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26438
PE,62.84,0,PPR,Pentatricopeptide repeat; seg,NULL; PREDICTED: SIMILAR
TO LEUCINE-RICH PPR-MOTIF CONTAINING,NULL,CUFF.55548.1
(483 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 354 7e-98
AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 324 7e-89
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 6e-70
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 3e-60
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 2e-57
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 2e-54
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 7e-52
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 9e-47
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 1e-46
AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 5e-38
AT1G28020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 3e-28
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 103 2e-22
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 103 2e-22
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 103 2e-22
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT3G15590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT3G11380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 8e-16
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 72 7e-13
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT1G28000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT1G43010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 60 4e-09
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 60 5e-09
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 5e-09
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 57 2e-08
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT2G20720.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 5e-08
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 5e-08
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 56 5e-08
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 7e-08
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 55 1e-07
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 55 1e-07
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 4e-07
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 4e-07
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 5e-07
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 7e-07
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 52 9e-07
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 52 1e-06
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 1e-06
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 2e-06
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 2e-06
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 2e-06
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 50 3e-06
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 50 4e-06
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-06
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 1e-05
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 1e-05
>AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:474516-476383 FORWARD
LENGTH=537
Length = 537
Score = 354 bits (909), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 191/427 (44%), Positives = 269/427 (62%), Gaps = 5/427 (1%)
Query: 19 TAVTEADRPAKGRSLYQRLSELEKTGMSASQTLDQYISEGKVAGKKELMSIVKELRKYRR 78
T+V ++ R LY++LS L TG + ++TL+Q+I EG K +L K LRK+RR
Sbjct: 59 TSVAAPTVASRQRELYKKLSMLSVTGGTVAETLNQFIMEGITVRKDDLFRCAKTLRKFRR 118
Query: 79 FQDALQIMKWMESRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSLPPLAMN-KYTYGAL 137
Q A +I WME R + ++A+ LDL+ K +G+ AAENYFN+L P A N + TYGAL
Sbjct: 119 PQHAFEIFDWMEKRKMTFSVSDHAICLDLIGKTKGLEAAENYFNNLDPSAKNHQSTYGAL 178
Query: 138 LNCYCKELMVNKALAHFDKMNELGYVT-FLSFNNLIGMYMRLGQPLKVHELVHDMKERNI 196
+NCYC EL KA AHF+ M+EL +V L FNN++ MYMRL QP KV LV MK+R I
Sbjct: 179 MNCYCVELEEEKAKAHFEIMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGI 238
Query: 197 PMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAE 256
Y WM S +LNDL G+EKI + M + E K W T+SNLAAIY KA +EKA+
Sbjct: 239 SPCGVTYSIWMQSCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIYTKAGLYEKAD 298
Query: 257 LMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKSVTP-VLNVSYLCMISAL 315
L+ +E+ + P R+++H L+SLYAG +VY +W+SLK P V N+SYL M+ A+
Sbjct: 299 SALKSMEEKMNPNNRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVMLQAM 358
Query: 316 KRLNDMEGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALVFKDAIKKSKGPFF 375
+L D++G+ + F EWES+ D+RL + I+ YL +M EEA + A+KKSKGPF
Sbjct: 359 SKLGDLDGIKKIFTEWESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMKKSKGPFS 418
Query: 376 KIREMFMIFFLEKCQLDGAVSHLEAALSEVV--GDEWRPTPRVLRAFVKYYKEETDLDGV 433
K R++ MI LE + D A+ HLEAA+S+ DEW + ++ F ++++ D+DG
Sbjct: 419 KARQLLMIHLLENDKADLAMKHLEAAVSDSAENKDEWGWSSELVSLFFLHFEKAKDVDGA 478
Query: 434 DELSKIL 440
++ KIL
Sbjct: 479 EDFCKIL 485
>AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:871268-872885 REVERSE
LENGTH=502
Length = 502
Score = 324 bits (831), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 186/443 (41%), Positives = 264/443 (59%), Gaps = 13/443 (2%)
Query: 10 GRRLLRHLCTAVTE------ADRPAKG---RSLYQRLSEL-EKTGMSASQTLDQYISEGK 59
RR L TA E A P K RS+Y++LS L + G +TL+Q++ EG
Sbjct: 9 ARRFCATLATATAEISGEAAASVPTKAKKHRSIYKKLSSLGTRGGGKMEETLNQFVMEGV 68
Query: 60 VAGKKELMSIVKELRKYRRFQDALQIMKWMESRVESPLDYNYAVHLDLVCKNEGVVAAEN 119
K +L+ K+LRK+R+ Q AL+I +WME + + ++A+ L+L+ K++G+ AAE
Sbjct: 69 PVKKHDLIRYAKDLRKFRQPQRALEIFEWMERKEIAFTGSDHAIRLNLIAKSKGLEAAET 128
Query: 120 YFNSLPPLAMNKYTYGALLNCYCKELMVNKALAHFDKMNELGYVT-FLSFNNLIGMYMRL 178
YFNSL N+ TYG+LLNCYC E KA AHF+ M +L +V+ L FNNL+ MYM L
Sbjct: 129 YFNSLDDSIKNQSTYGSLLNCYCVEKEEVKAKAHFENMVDLNHVSNSLPFNNLMAMYMGL 188
Query: 179 GQPLKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLT 238
GQP KV LV MKE++I Y W+ S +L DL GVEK+ + MK E E W T
Sbjct: 189 GQPEKVPALVVAMKEKSITPCDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSWNT 248
Query: 239 YSNLAAIYVKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLK 298
++NLAAIY+K + KAE L+ LE + P R+ YH L++LY G N +VY +WD LK
Sbjct: 249 FANLAAIYIKVGLYGKAEEALKSLENNMNPDVRDCYHFLINLYTGIANASEVYRVWDLLK 308
Query: 299 SVTP-VLNVSYLCMISALKRLNDMEGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSE 357
P V N SYL M+ AL +L+D++G+ + F EWES D+R+ + IS+YL +M E
Sbjct: 309 KRYPNVNNSSYLTMLRALSKLDDIDGVKKVFAEWESTCWTYDMRMANVAISSYLKQNMYE 368
Query: 358 EAALVFKDAIKKSKGPFFKIREMFMIFFLEKCQLDGAVSHLEAALSEVVGDEWRPTPRVL 417
EA VF A+KK KG F K R++ M+ L+ Q D A+ H EAA+ + W + ++
Sbjct: 369 EAEAVFNGAMKKCKGQFSKARQLLMMHLLKNDQADLALKHFEAAVLD-QDKNWTWSSELI 427
Query: 418 RAFVKYYKEETDLDGVDELSKIL 440
+F +++E D+DG +E K L
Sbjct: 428 SSFFLHFEEAKDVDGAEEFCKTL 450
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 261 bits (668), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 150/434 (34%), Positives = 242/434 (55%), Gaps = 7/434 (1%)
Query: 14 LRHLCTAVTEADRPAKG---RSLYQRLSELEKTGMSASQTLDQYISEGKVAGKKELMSIV 70
+RHL + R K LY RL + T + Q L+Q++ K K E+ +
Sbjct: 3 MRHLSRSRDVTKRSTKKYIEEPLYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTI 62
Query: 71 KELRKYRRFQDALQIMKWMESRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSLPPLAMN 130
K+LR + AL++ + ME R + + A+HLDLV K + A ENYF LP +
Sbjct: 63 KKLRNRGLYYPALKLSEVMEERGMNKTVSDQAIHLDLVAKAREITAGENYFVDLPETSKT 122
Query: 131 KYTYGALLNCYCKELMVNKALAHFDKMNELGYV-TFLSFNNLIGMYMRLGQPLKVHELVH 189
+ TYG+LLNCYCKEL+ KA +KM EL + +S+N+L+ +Y + G+ KV ++
Sbjct: 123 ELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQ 182
Query: 190 DMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKA 249
++K N+ ++ Y+ WM + AA ND+ GVE++ E M + DW TYSN+A+IYV A
Sbjct: 183 ELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDA 242
Query: 250 KQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKSVTP-VLNVSY 308
+KAE L++LE R AY L++LY G L +VY +W SL+ P NV+Y
Sbjct: 243 GLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAY 302
Query: 309 LCMISALKRLNDMEGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALVFKDAIK 368
L MI L +LND+ G FKEW++ D+R+++ +I AY + ++A + + A +
Sbjct: 303 LNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPR 362
Query: 369 KSKGPFFKIREMFMIFFLEKCQLDGAVSHLEAALSEVVGD--EWRPTPRVLRAFVKYYKE 426
+ K E+FM ++++ + A+ + A+S GD +W P+P +RA + Y+++
Sbjct: 363 RGGKLNAKTWEIFMDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQ 422
Query: 427 ETDLDGVDELSKIL 440
+ D++G + L +IL
Sbjct: 423 KKDVNGAENLLEIL 436
>AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:408779-410433 FORWARD
LENGTH=524
Length = 524
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 137/415 (33%), Positives = 229/415 (55%), Gaps = 8/415 (1%)
Query: 32 SLYQRLSELEKTGMSASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWMES 91
++Y+++S +EK + A+ L+Q+ G+ K EL +VKELRKY+R AL++ WM +
Sbjct: 68 AIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNN 127
Query: 92 RVE----SPLDYNYAVHLDLVCKNEGVVAAENYFNSLPPLAMNKYTYGALLNCYCKELMV 147
R E S D A+ LDL+ K G+ AE +F LP ++ YG+LLN Y +
Sbjct: 128 RGERFRLSASDA--AIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSR 185
Query: 148 NKALAHFDKMNELGYVTF-LSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAW 206
KA A + M + GY L FN ++ +YM L + KV +V +MK+++I + ++Y+ W
Sbjct: 186 EKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIW 245
Query: 207 MNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQAV 266
++S +L + +E +Y+ MK +V +W T+S +A +Y+K + EKAE LRK+E +
Sbjct: 246 LSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARI 305
Query: 267 KPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKSVTP-VLNVSYLCMISALKRLNDMEGLI 325
R R YH LLSLY GN +++Y +W KSV P + N+ Y ++S+L R+ D+EG
Sbjct: 306 TGRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAE 365
Query: 326 RCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALVFKDAIKKSKGPFFKIREMFMIFF 385
+ ++EW D R+ + +++AY+ +D E A +F ++ P E+ +
Sbjct: 366 KVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGH 425
Query: 386 LEKCQLDGAVSHLEAALSEVVGDEWRPTPRVLRAFVKYYKEETDLDGVDELSKIL 440
K + A++ L A S WRP +L F K +EE+D+ + + ++L
Sbjct: 426 TRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELL 480
>AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8926110-8927722 FORWARD
LENGTH=490
Length = 490
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 136/414 (32%), Positives = 231/414 (55%), Gaps = 8/414 (1%)
Query: 32 SLYQRLSELEKTGMSASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWM-E 90
+L +R++ S + LD ++ +G + EL SI+K LRK+ RF ALQI WM E
Sbjct: 39 TLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMSE 98
Query: 91 SRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSLPPLAMNKYTYGALLNCYCKELMVNKA 150
RV + + A+ LDL+ K G+ AE +F ++P N + YGALLNCY + +++KA
Sbjct: 99 HRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKA 158
Query: 151 LAHFDKMNELGYVTF-LSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNS 209
F +M ELG++ L +N ++ +Y+R G+ V +L+ +M++ + F + +++
Sbjct: 159 EQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHA 218
Query: 210 YAALNDLVGVEKIYELMKLEVET--KIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQAVK 267
Y+ ++D+ G+EK LM+ E + +DW TY++ A Y+KA EKA MLRK EQ V
Sbjct: 219 YSVVSDVEGMEKF--LMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVN 276
Query: 268 PRKRE-AYHCLLSLYAGTGNLEKVYSLWDSLKSVTPVLNVSYLCMISALKRLNDMEGLIR 326
+KR+ AY L+S Y G E+VY LW K + N Y+ +ISAL +++D+E + +
Sbjct: 277 AQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEVEK 336
Query: 327 CFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALVFKDAIKKSKGPFFKIREMFMIFFL 386
+EWE+ + D+R+ +I+ Y M E+A V ++K + E + +
Sbjct: 337 IMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYK 396
Query: 387 EKCQLDGAVSHLEAALSEVVGDEWRPTPRVLRAFVKYYKEETDLDGVDELSKIL 440
+++ AV + A+ EV WRP VL + V Y + + D++G+ ++ ++L
Sbjct: 397 MAGKMEKAVEKWKRAI-EVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLL 449
>AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11533257-11534817 REVERSE
LENGTH=492
Length = 492
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 136/431 (31%), Positives = 227/431 (52%), Gaps = 10/431 (2%)
Query: 11 RRLLRHLCTAVTEADRPAKGRSLYQRLSELEKTGMSASQTLDQYISEGKVAGKKELMSIV 70
RR+ +L + K +LY ++S L S L ++ GK EL+ IV
Sbjct: 5 RRIPANLIASRYYYTNRVKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIV 64
Query: 71 KELRKYRRFQDALQIMKWMESR---VESPLDYNYAVHLDLVCKNEGVVAAENYFNSLPPL 127
+LR+ +RF AL++ KWM V SP ++ AVHLDL+ + G V AE YF +L
Sbjct: 65 HDLRRRKRFLHALEVSKWMNETGVCVFSPTEH--AVHLDLIGRVYGFVTAEEYFENLKEQ 122
Query: 128 AMNKYTYGALLNCYCKELMVNKALAHFDKMNELGYVTF-LSFNNLIGMYMRLGQPLKVHE 186
N TYGALLNCY ++ V K+L HF+KM E+G+VT L++NN++ +Y +GQ KV +
Sbjct: 123 YKNDKTYGALLNCYVRQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPK 182
Query: 187 LVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIY 246
++ +MKE N+ ++Y +N++ A+ DL + M+ + +DW TY+ A Y
Sbjct: 183 VLEEMKEENVAPDNYSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFY 242
Query: 247 VKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKSVTP-VLN 305
+ ++A +L+ E ++ + E Y+ L++LYA G +V LWD K V +N
Sbjct: 243 IDGGDCDRAVELLKMSENRLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRIN 302
Query: 306 VSYLCMISALKRLNDMEGLIRCFKEWESRYGHC-DLRLISAVISAYLSHDMSEEAALVFK 364
YL ++ +L +++ + EW+S G+C D R+ + VI Y+ M E+A + +
Sbjct: 303 QDYLTVLQSLVKIDALVEAEEVLTEWKSS-GNCYDFRVPNTVIRGYIGKSMEEKAEAMLE 361
Query: 365 DAIKKSKGPFFKIREMFMIFFLEKCQLDGAVSHLEAALSEVVGD-EWRPTPRVLRAFVKY 423
D ++ K + E+ + EK L+ A ++ AL VG +WRP ++ + + +
Sbjct: 362 DLARRGKATTPESWELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSW 421
Query: 424 YKEETDLDGVD 434
+E L V+
Sbjct: 422 VGDEGSLKEVE 432
>AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:1258581-1260265 FORWARD
LENGTH=532
Length = 532
Score = 201 bits (512), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 134/425 (31%), Positives = 228/425 (53%), Gaps = 8/425 (1%)
Query: 30 GR-SLYQRLSELEKTGMSASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKW 88
GR +L RL L T SA T+ ++ EG K EL IV+ELRK +R++ AL+I +W
Sbjct: 59 GRDTLGGRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEW 118
Query: 89 MESRVESPLDY-NYAVHLDLVCKNEGVVAAENYFNSLPPLAMNKYTYGALLNCYCKELMV 147
M + + L +YAVHLDL+ K G+ +AE +F +P +LL+ Y + +
Sbjct: 119 MVVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLS 178
Query: 148 NKALAHFDKMNELGYV-TFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAW 206
+KA A F+KM E G++ + L +N+++ MY+ GQ KV L+ ++K R P Y+ W
Sbjct: 179 DKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIRTSP-DIVTYNLW 237
Query: 207 MNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQAV 266
+ ++A+ ND+ G EK+Y L E + DW+TYS L +Y K EKA L L+++E+ V
Sbjct: 238 LTAFASGNDVEGAEKVY-LKAKEEKLNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLV 296
Query: 267 KPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKSVTPVLN-VSYLCMISALKRLNDMEGLI 325
+ R AY L+SL+A G+ + V W +KS +N YL MISA+ +L + E
Sbjct: 297 SKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAK 356
Query: 326 RCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALVFKDAIKKSKGPFFKIREMFMIFF 385
+ EWES G D R+ + +++ Y++ D ++ ++K P + E+ +
Sbjct: 357 GLYDEWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAY 416
Query: 386 LEKCQLDGAVSHLEAALSEVVGDEWRPTPRVLRAFVKYYKEETDLDGVDELSKILMTHNF 445
L++ ++ + A+ V +W R+++ K +E+ ++ G ++L +L +
Sbjct: 417 LKRKDMEKVLDCFGKAIDSV--KKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGY 474
Query: 446 DDSWL 450
++ L
Sbjct: 475 VNTQL 479
>AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8926535-8927722 FORWARD
LENGTH=395
Length = 395
Score = 184 bits (468), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 198/355 (55%), Gaps = 7/355 (1%)
Query: 90 ESRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSLPPLAMNKYTYGALLNCYCKELMVNK 149
E RV + + A+ LDL+ K G+ AE +F ++P N + YGALLNCY + +++K
Sbjct: 3 EHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHK 62
Query: 150 ALAHFDKMNELGYVTF-LSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMN 208
A F +M ELG++ L +N ++ +Y+R G+ V +L+ +M++ + F + ++
Sbjct: 63 AEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLH 122
Query: 209 SYAALNDLVGVEKIYELMKLEVET--KIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQAV 266
+Y+ ++D+ G+EK LM+ E + +DW TY++ A Y+KA EKA MLRK EQ V
Sbjct: 123 AYSVVSDVEGMEKF--LMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMV 180
Query: 267 KPRKRE-AYHCLLSLYAGTGNLEKVYSLWDSLKSVTPVLNVSYLCMISALKRLNDMEGLI 325
+KR+ AY L+S Y G E+VY LW K + N Y+ +ISAL +++D+E +
Sbjct: 181 NAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEVE 240
Query: 326 RCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALVFKDAIKKSKGPFFKIREMFMIFF 385
+ +EWE+ + D+R+ +I+ Y M E+A V ++K + E + +
Sbjct: 241 KIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGY 300
Query: 386 LEKCQLDGAVSHLEAALSEVVGDEWRPTPRVLRAFVKYYKEETDLDGVDELSKIL 440
+++ AV + A+ EV WRP VL + V Y + + D++G+ ++ ++L
Sbjct: 301 KMAGKMEKAVEKWKRAI-EVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLL 354
>AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9693262-9694815 REVERSE
LENGTH=491
Length = 491
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/401 (30%), Positives = 209/401 (52%), Gaps = 9/401 (2%)
Query: 40 LEKTG--MSASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWMESRVESPL 97
L K G S + L + I G EL I K L + R+ ALQ+M+WME++ +
Sbjct: 45 LRKNGPRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWMENQKDIEF 104
Query: 98 D-YNYAVHLDLVCKNEGVVAAENYFNSL----PPLAMNKYTYGALLNCYCKELMVNKALA 152
Y+ A+ LDL+ K G+ E YF L + + K Y LL Y K MV +A A
Sbjct: 105 SVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNKMVKEAEA 164
Query: 153 HFDKMNELGY-VTFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNSYA 211
+K+N LG+ VT FN ++ +Y GQ KV +V MK IP + +Y+ WMN+
Sbjct: 165 LMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWMNACC 224
Query: 212 ALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQAVKPRKR 271
++ + VE +Y+ M + ++ W + LA +Y+K+ EKA L+L E+ + R
Sbjct: 225 EVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKMLNRSNR 284
Query: 272 EAYHCLLSLYAGTGNLEKVYSLWDSLKSVTPVLN-VSYLCMISALKRLNDMEGLIRCFKE 330
Y L++LYA GN E V LW+ KSV ++ V+Y+C++S+L + D+E R F E
Sbjct: 285 LGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAERVFSE 344
Query: 331 WESRYGHCDLRLISAVISAYLSHDMSEEAALVFKDAIKKSKGPFFKIREMFMIFFLEKCQ 390
WE++ + D+R+ + ++ AY+ + +A + +++ P +K E+ M +++
Sbjct: 345 WEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGWVKCEN 404
Query: 391 LDGAVSHLEAALSEVVGDEWRPTPRVLRAFVKYYKEETDLD 431
++ A+ + + WRP+ ++ A +Y+++E ++
Sbjct: 405 MEKAIDAMHQVFVLMRRCHWRPSHNIVMAIAEYFEKEEKIE 445
>AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2941864-2943324 FORWARD
LENGTH=409
Length = 409
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 168/306 (54%), Gaps = 8/306 (2%)
Query: 33 LYQRLSELEKTGMSASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWMESR 92
L R+ L SA+ L+++I EG EL I KELR+ RR++ AL++ +WM
Sbjct: 57 LKSRIFRLRLPKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEWMVQH 116
Query: 93 VESPL-DYNYAVHLDLVCKNEGVVAAENYFNSLPPLAMNKYTYGALLNCYCKELMVNKAL 151
ES + D +YA +DL+ K G+ AAE YF L + TY +LL+ Y +A
Sbjct: 117 EESKISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTERAE 176
Query: 152 AHFDKMNELGYVTF--LSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNS 209
A F ++ E +TF +++N ++ +YM +GQ KV E++ +K++ + F Y+ W++S
Sbjct: 177 ALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLSS 236
Query: 210 YAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLR-KLEQAVKP 268
AA ++ + KI E M+ + + W+ Y +L +IY+ + + AE L + E+++
Sbjct: 237 CAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSISQ 296
Query: 269 RKREAYHCLLSLYAGTGNLEKVYSLWDSLKSVTPVLNV-SYLCMISA---LKRLNDMEGL 324
R+ Y L+ L+ G GN + +W SL++ +L+ SY+C++S+ L L + E +
Sbjct: 297 REWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLREAEEI 356
Query: 325 IRCFKE 330
I +KE
Sbjct: 357 IHQWKE 362
>AT1G28020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:9768395-9771157 REVERSE
LENGTH=612
Length = 612
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 160/315 (50%), Gaps = 5/315 (1%)
Query: 50 TLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWM-ESRVESPLDYNYAVHLDLV 108
L+Q+ +G + I+K+LR + ALQ+ +WM + ++ + + ++A L L+
Sbjct: 55 VLEQWRQQGNQVNPSHVRVIIKKLRDSDQSLQALQVSEWMSKEKICNLIPEDFAARLHLI 114
Query: 109 CKNEGVVAAENYFNSLPPLAMNKYTYGALLNCYCK-ELMVNKALAHFDKMNELGYV-TFL 166
G+ AE +F S+P A Y +LLN Y + + + KA A F KM +LG + +
Sbjct: 115 ENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEATFQKMRDLGLLLRPV 174
Query: 167 SFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELM 226
+N ++ +Y L KV EL+ +MK+ ++ + + Y+A+ D+ +EK
Sbjct: 175 PYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCDVTEMEKFLNKW 234
Query: 227 KLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQAVKPRK-REAYHCLLSLYAGTG 285
+ K++W T ++A Y++A+ KA MLR EQ V + + AY L+ LY G
Sbjct: 235 EGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLVDQKSLKSAYDHLMKLYGEAG 294
Query: 286 NLEKVYSLWDSLKS-VTPVLNVSYLCMISALKRLNDMEGLIRCFKEWESRYGHCDLRLIS 344
N E+V +W KS + N Y +I +L +++D+ G +K WES D R+ +
Sbjct: 295 NREEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYKVWESLPLEFDHRIPT 354
Query: 345 AVISAYLSHDMSEEA 359
+ S Y M+E+A
Sbjct: 355 MLASGYRDRGMTEKA 369
>AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 165/333 (49%), Gaps = 13/333 (3%)
Query: 31 RSLYQRLSELEKT-----GMSASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQI 85
+++ ++ SEL KT G+S LD+++ EG + E+ + +LR+ R + ALQ+
Sbjct: 123 KTVEKKQSELFKTIVSAPGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQM 182
Query: 86 MKWMESRVESPL-DYNYAVHLDLVCKNEGVVAAENYFNSLPPLAMNKYTYGALL-NCYCK 143
+W+E+ + + + +YA LDL K G+ E +P + Y LL NC
Sbjct: 183 SEWLEANKKIEMTERDYASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAA 242
Query: 144 ELMVNKALAHFDKMNELGY-VTFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFA 202
V K+ F+KM +LG+ ++ + + ++ ++ R+ + K+ +++ M++ NI S
Sbjct: 243 G-NVKKSELVFNKMKDLGFPLSGFTCDQMLLLHKRIDRK-KIADVLLLMEKENIKPSLLT 300
Query: 203 YHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKL 262
Y ++ A ND+ G+E+I E MK E ++D+ T + A Y A +KAE +L+++
Sbjct: 301 YKILIDVKGATNDISGMEQILETMKDE-GVELDFQTQALTARHYSGAGLKDKAEKVLKEM 359
Query: 263 EQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKSVTPVLNVSYLCMISALKRLNDME 322
E R A+ LLS+YA G ++V +W +S P S L I A +LN ++
Sbjct: 360 EGESLEANRRAFKDLLSIYASLGREDEVKRIWKICES-KPYFEES-LAAIQAFGKLNKVQ 417
Query: 323 GLIRCFKEWESRYGHCDLRLISAVISAYLSHDM 355
F++ S ++ Y+ H M
Sbjct: 418 EAEAIFEKIVKMDRRASSSTYSVLLRVYVDHKM 450
>AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 165/333 (49%), Gaps = 13/333 (3%)
Query: 31 RSLYQRLSELEKT-----GMSASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQI 85
+++ ++ SEL KT G+S LD+++ EG + E+ + +LR+ R + ALQ+
Sbjct: 123 KTVEKKQSELFKTIVSAPGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQM 182
Query: 86 MKWMESRVESPL-DYNYAVHLDLVCKNEGVVAAENYFNSLPPLAMNKYTYGALL-NCYCK 143
+W+E+ + + + +YA LDL K G+ E +P + Y LL NC
Sbjct: 183 SEWLEANKKIEMTERDYASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAA 242
Query: 144 ELMVNKALAHFDKMNELGY-VTFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFA 202
V K+ F+KM +LG+ ++ + + ++ ++ R+ + K+ +++ M++ NI S
Sbjct: 243 G-NVKKSELVFNKMKDLGFPLSGFTCDQMLLLHKRIDRK-KIADVLLLMEKENIKPSLLT 300
Query: 203 YHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKL 262
Y ++ A ND+ G+E+I E MK E ++D+ T + A Y A +KAE +L+++
Sbjct: 301 YKILIDVKGATNDISGMEQILETMKDE-GVELDFQTQALTARHYSGAGLKDKAEKVLKEM 359
Query: 263 EQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKSVTPVLNVSYLCMISALKRLNDME 322
E R A+ LLS+YA G ++V +W +S P S L I A +LN ++
Sbjct: 360 EGESLEANRRAFKDLLSIYASLGREDEVKRIWKICES-KPYFEES-LAAIQAFGKLNKVQ 417
Query: 323 GLIRCFKEWESRYGHCDLRLISAVISAYLSHDM 355
F++ S ++ Y+ H M
Sbjct: 418 EAEAIFEKIVKMDRRASSSTYSVLLRVYVDHKM 450
>AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 165/333 (49%), Gaps = 13/333 (3%)
Query: 31 RSLYQRLSELEKT-----GMSASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQI 85
+++ ++ SEL KT G+S LD+++ EG + E+ + +LR+ R + ALQ+
Sbjct: 123 KTVEKKQSELFKTIVSAPGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQM 182
Query: 86 MKWMESRVESPL-DYNYAVHLDLVCKNEGVVAAENYFNSLPPLAMNKYTYGALL-NCYCK 143
+W+E+ + + + +YA LDL K G+ E +P + Y LL NC
Sbjct: 183 SEWLEANKKIEMTERDYASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAA 242
Query: 144 ELMVNKALAHFDKMNELGY-VTFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFA 202
V K+ F+KM +LG+ ++ + + ++ ++ R+ + K+ +++ M++ NI S
Sbjct: 243 G-NVKKSELVFNKMKDLGFPLSGFTCDQMLLLHKRIDRK-KIADVLLLMEKENIKPSLLT 300
Query: 203 YHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKL 262
Y ++ A ND+ G+E+I E MK E ++D+ T + A Y A +KAE +L+++
Sbjct: 301 YKILIDVKGATNDISGMEQILETMKDE-GVELDFQTQALTARHYSGAGLKDKAEKVLKEM 359
Query: 263 EQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKSVTPVLNVSYLCMISALKRLNDME 322
E R A+ LLS+YA G ++V +W +S P S L I A +LN ++
Sbjct: 360 EGESLEANRRAFKDLLSIYASLGREDEVKRIWKICES-KPYFEES-LAAIQAFGKLNKVQ 417
Query: 323 GLIRCFKEWESRYGHCDLRLISAVISAYLSHDM 355
F++ S ++ Y+ H M
Sbjct: 418 EAEAIFEKIVKMDRRASSSTYSVLLRVYVDHKM 450
>AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5318307-5320422 FORWARD
LENGTH=594
Length = 594
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 172/351 (49%), Gaps = 15/351 (4%)
Query: 21 VTEADRPAKGRSLYQRLSELEKTGMSASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQ 80
V E+ RP++ +++ + + +G+S LD+++ +GK +KE S + +LRK R F
Sbjct: 121 VPESKRPSE---MFKAIVSV--SGLSVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFG 175
Query: 81 DALQIMKWMESRVESPL-DYNYAVHLDLVCKNEGVVAAENYFNSLPPLAMNKYTYGALLN 139
ALQ+ +W++ + + + +YA LDL+ K G E Y ++P + Y LL
Sbjct: 176 RALQMTEWLDENKQFEMEERDYACRLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLA 235
Query: 140 CYCKELMVNKALAHFDKMNELGY-VTFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPM 198
+ V A A F+KM +LG+ ++ + N ++ +Y R+ + K+ +++ +++ N+
Sbjct: 236 NHVATSNVRTAEAVFNKMKDLGFPLSTFTCNQMLILYKRVDKK-KIADVLLLLEKENLKP 294
Query: 199 SAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELM 258
+ Y +++ + ND+ G+E+I E MK E ++D + +A Y A EKAE +
Sbjct: 295 NLNTYKILIDTKGSSNDITGMEQIVETMKSE-GVELDLRARALIARHYASAGLKEKAEKV 353
Query: 259 LRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKSVTPVLNVSYLCMISALKRL 318
L+++E R LLS+Y ++V +W + P N L I A ++
Sbjct: 354 LKEMEGESLEENRHMCKDLLSVYGYLQREDEVRRVW-KICEENPRYN-EVLAAILAFGKI 411
Query: 319 NDMEGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALVFKDAIKK 369
+ ++ F++ + S ++ Y+ H M E KD +K+
Sbjct: 412 DKVKDAEAVFEKVLKMSHRVSSNVYSVLLRVYVDHKMVSEG----KDLVKQ 458
>AT3G15590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5275568-5277658 REVERSE
LENGTH=610
Length = 610
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 137/278 (49%), Gaps = 15/278 (5%)
Query: 23 EADRPAKGRS---LYQRLSELEKTGMSASQTLDQYISEGKVAGKKELMSIVKELRKYRRF 79
+ +P K R LY+ + + S L++++ EGK + E+ + LRK + +
Sbjct: 134 DGGKPTKKRGQSELYESIVAYK----SVKHVLEKWVKEGKDLSQAEVTLAIHNLRKRKSY 189
Query: 80 QDALQIMKWMESRVESPL-DYNYAVHLDLVCKNEGVVAAENYFNSLPPLAMNKYTYGALL 138
LQ+ +W+ + + + NYA LDLV K + AE + +P + + Y LL
Sbjct: 190 AMCLQLWEWLGANTQFEFTEANYASQLDLVAKVHSLQKAEIFLKDIPESSRGEVVYRTLL 249
Query: 139 -NCYCKELMVNKALAHFDKMNELGYVTFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIP 197
NC K VNKA F+KM EL + T + N + + + K+ +++ M+ NI
Sbjct: 250 ANCVLKH-HVNKAEDIFNKMKELKFPTSVFACNQLLLLYSMHDRKKISDVLLLMERENIK 308
Query: 198 MSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAEL 257
S YH +NS D+ G+EKI E +K E ++D S LA Y++A E+A+
Sbjct: 309 PSRATYHFLINSKGLAGDITGMEKIVETIK-EEGIELDPELQSILAKYYIRAGLKERAQD 367
Query: 258 MLRKLEQAVKPRKREAYHC--LLSLYAGTGNLEKVYSL 293
+++++E K ++ + C LL LYA G+ + V L
Sbjct: 368 LMKEIEG--KGLQQTPWVCRSLLPLYADIGDSDNVRRL 403
>AT3G11380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3564079-3565779 FORWARD
LENGTH=541
Length = 541
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 134/295 (45%), Gaps = 36/295 (12%)
Query: 66 LMSIVKELRKYRRFQDALQIMKWMESRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSLP 125
L IV++LR R + AL++ WM + L +++ L K + AE +F S+P
Sbjct: 78 LRGIVEKLRSSNRPRQALEVSDWMVEQKMYNLPEDFSARFHLTEKVLNLEEAEKFFESIP 137
Query: 126 PLAMNKYTYGALLNCYCK---ELMVNKALAHFDKMNELGYVTFLS-FNNLIGMYMRLGQP 181
+ Y +LL Y + E + KA + F KM +LG + S +N++ +Y LG
Sbjct: 138 ENMRFESMYNSLLRSYARQSGEKALKKAESVFKKMKKLGLLLRPSPYNSMTSLYSSLGNR 197
Query: 182 LKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSN 241
KV E++ +MKE N+ + + + YAA++D+ ++K L + T++D LT
Sbjct: 198 DKVDEILREMKENNVELDNVTVNNALRVYAAVSDVATMDKF--LADRKEITRLDGLT--- 252
Query: 242 LAAIYVKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKSVT 301
+ AK +E L+SLY G +E V+ +WD K+
Sbjct: 253 ---MLAMAKAYE-----------------------LMSLYGEAGEIEDVHRVWDKYKATR 286
Query: 302 PVLNVSYLCMISALKRLNDMEGLIRC-FKEWESRYGHCDLRLISAVISAYLSHDM 355
N + +I +L +L D +G + + EWE D R+ ++S Y M
Sbjct: 287 QKDNEEFRTLIGSLLKLGDTKGAEKIYYNEWECSGLEFDNRIPDMLVSGYREKGM 341
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 79/150 (52%), Gaps = 4/150 (2%)
Query: 51 LDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWM-ESRVESPLDYNYAVHLDLVC 109
L++ +G L ++K LR + AL+ WM + +V + +YA L L
Sbjct: 366 LEEMDKKGNKVSPPGLRDLIKNLRDSNQLSKALEASTWMCQKKVFNLFSEDYATRLHLTE 425
Query: 110 KNEGVVAAENYFNSLPPLAMNKYT-YGALLNCYCKELMV-NKALAHFDKMNELGYVTFLS 167
K G+ AEN+F S P M Y+ Y LL+CY + +KA A F+KM ELG + LS
Sbjct: 426 KVLGLEEAENFFESSIPENMKDYSVYDTLLSCYARSSNTQSKAEAVFEKMRELGLQSKLS 485
Query: 168 -FNNLIGMYMRLGQPLKVHELVHDMKERNI 196
FN+LI +Y G+ V+ L+ DMK +NI
Sbjct: 486 PFNSLISLYSGQGKLSVVNILLCDMKHKNI 515
>AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2336649-2338481 REVERSE
LENGTH=534
Length = 534
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 157/348 (45%), Gaps = 20/348 (5%)
Query: 27 PAKGRSLYQRLSELEKTGMSASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIM 86
P K SL R+ +L K G++ L ++ +G ++ + LRK R + AL++M
Sbjct: 64 PNKCLSL--RIEKLPK-GVTVGSALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALELM 120
Query: 87 KWMESRVESP-----LDYNYAVHLDLVCKNEGVVAAENYFNSLPPLAMNKYTYGALLNCY 141
+W+ E P L+Y+Y L+ K GV E F +P N+ Y L+
Sbjct: 121 EWIIR--ERPYRLGELEYSYL--LEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIAC 176
Query: 142 CKELMVNKALAHFDKMNELGYVT-FLSFNNLIGMYMRLGQPLKVHELVHD---MKERNIP 197
+ ++ AL + KM ELGY T L +N LI +R P + + D MK
Sbjct: 177 LDQGVIRLALEYMKKMRELGYRTSHLVYNRLI---IRNSAPGRRKLIAKDLALMKADKAT 233
Query: 198 MSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAEL 257
YH M A +++ GV K ++ MK + + + ++Y LA + A+ + AE
Sbjct: 234 PHVSTYHILMKLEANEHNIDGVLKAFDGMK-KAGVEPNEVSYCILAMAHAVARLYTVAEA 292
Query: 258 MLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKSVTPVLNVSYLCMISALKR 317
++E+++ L+ LY G +++ W+ ++ V + SYL A R
Sbjct: 293 YTEEIEKSITGDNWSTLDILMILYGRLGKEKELARTWNVIRGFHHVRSKSYLLATEAFAR 352
Query: 318 LNDMEGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALVFKD 365
+ +++ + E ++ G + ++++S Y + E+A VF++
Sbjct: 353 VGNLDRAEELWLEMKNVKGLKETEQFNSLLSVYCKDGLIEKAIGVFRE 400
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 122/257 (47%), Gaps = 4/257 (1%)
Query: 47 ASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWMESRVESPLDYNYAVHLD 106
ASQ L++ +S G +++ F++AL++ ME++ +P + +Y V LD
Sbjct: 357 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLD 416
Query: 107 LVCKNEGVVAAENYFNSLP--PLAMNKYTYGALLNCYCKELMVNKALAHFDKMNELGY-V 163
+CKN A ++ + + + + TY +++ CK +++A+ ++M++ G
Sbjct: 417 GLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDP 476
Query: 164 TFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIY 223
++++ LI + ++G+ E+V + + + Y + + + L +IY
Sbjct: 477 DIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIY 536
Query: 224 ELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAG 283
E M LE T+ D T++ L KA + +AE +R + ++ CL++ Y
Sbjct: 537 EAMILEGHTR-DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGN 595
Query: 284 TGNLEKVYSLWDSLKSV 300
+G K +S++D + V
Sbjct: 596 SGEGLKAFSVFDEMTKV 612
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 126/269 (46%), Gaps = 29/269 (10%)
Query: 77 RRFQDALQIMKWMESRVESP--LDYN-----YAVHLDLVCKNEGVVAAENYFNSLPPLAM 129
R+ ++A I+ M+S P + +N YA + C E ++ N + P
Sbjct: 474 RKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYA-RIGSTCTAEDMIIPRMLHNKVKP--- 529
Query: 130 NKYTYGALLNCYCKELMVNKALAHFDKMNELG-YVTFLSFNNLIGMYMRLGQPLKVHELV 188
N T G ++N YC+E + +AL F +M ELG + FN+LI ++ + V E+V
Sbjct: 530 NVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVV 589
Query: 189 HDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVK 248
M+E + + MN+++++ D+ E+IY M LE D +S LA Y +
Sbjct: 590 DLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDM-LEGGIDPDIHAFSILAKGYAR 648
Query: 249 AKQFEKAELMLRKLEQ-AVKPRKREAYHCLLSLYAGTGNLEK---VYSLWDSLKSVTPVL 304
A + EKAE +L ++ + V+P Y ++S + G ++K VY + ++P L
Sbjct: 649 AGEPEKAEQILNQMRKFGVRPNVV-IYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNL 707
Query: 305 NVSYLCMI----------SALKRLNDMEG 323
+Y +I A + L DMEG
Sbjct: 708 -TTYETLIWGFGEAKQPWKAEELLKDMEG 735
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 147/315 (46%), Gaps = 21/315 (6%)
Query: 65 ELMSIVKELRKYRRFQDALQIMKWM--ESRVESPLDYNY-AVHLDLVCKNEGVVAAENYF 121
EL++ +K L +++F AL+ W + +S LD + A+ + ++ K V +A N F
Sbjct: 137 ELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMF 196
Query: 122 NSLPP--LAMNKYTYGALLNCYCKELMVNKALAHFDKMNELG-YVTFLSFNNLIGMYMRL 178
N L +++ Y+Y +L++ + +A+ F KM E G T +++N ++ ++ ++
Sbjct: 197 NGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKM 256
Query: 179 GQPL-KVHELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWL 237
G P K+ LV MK I A+ Y+ + + +++E MK D +
Sbjct: 257 GTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMK-AAGFSYDKV 315
Query: 238 TYSNLAAIYVKAKQFEKA-----ELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYS 292
TY+ L +Y K+ + ++A E++L ++ Y+ L+S YA G L++
Sbjct: 316 TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIV-----TYNSLISAYARDGMLDEAME 370
Query: 293 LWDSL--KSVTPVLNVSYLCMISALKRLNDMEGLIRCFKEWESRYGHCDLRLISAVISAY 350
L + + K P + +Y ++S +R +E + F+E + ++ +A I Y
Sbjct: 371 LKNQMAEKGTKPDV-FTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMY 429
Query: 351 LSHDMSEEAALVFKD 365
+ E +F +
Sbjct: 430 GNRGKFTEMMKIFDE 444
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 143/318 (44%), Gaps = 20/318 (6%)
Query: 68 SIVKELRKYRRFQDALQIMKWMESRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSL--- 124
S++ R+++A+ + K ME P Y V L++ K + N SL
Sbjct: 213 SLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGK---MGTPWNKITSLVEK 269
Query: 125 ---PPLAMNKYTYGALLNCYCKELMVNKALAH-FDKMNELGYV-TFLSFNNLIGMYMRLG 179
+A + YTY L+ C CK +++ A F++M G+ +++N L+ +Y +
Sbjct: 270 MKSDGIAPDAYTYNTLITC-CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSH 328
Query: 180 QPLKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTY 239
+P + +++++M S Y++ +++YA L ++ M E TK D TY
Sbjct: 329 RPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMA-EKGTKPDVFTY 387
Query: 240 SNLAAIYVKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLK- 298
+ L + + +A + E A + ++ A ++ + +Y G ++ ++D +
Sbjct: 388 TTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINV 447
Query: 299 -SVTPVLNVSYLCMISALKRLNDMEGLIR-CFKEWESRYGHCDLR-LISAVISAYLSHDM 355
++P + V++ +++ + N M+ + FKE + R G R + +ISAY
Sbjct: 448 CGLSPDI-VTWNTLLAVFGQ-NGMDSEVSGVFKEMK-RAGFVPERETFNTLISAYSRCGS 504
Query: 356 SEEAALVFKDAIKKSKGP 373
E+A V++ + P
Sbjct: 505 FEQAMTVYRRMLDAGVTP 522
>AT1G28000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9756674-9757947 REVERSE
LENGTH=388
Length = 388
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 24/274 (8%)
Query: 27 PAKGRSLYQRLSELEKTGMSASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIM 86
P + + R+ L + + LD+++ GK L ++ L + +RF ALQ+
Sbjct: 29 PKLNETSHSRIMALGREQKKVTPPLDEWLKRGKDLNPAVLRGLINSLCESQRFNHALQVS 88
Query: 87 KWMESRVESPLDY-NYAVHLDLVCKNEGVVAAENYFNSLPPLAMNKYTYGALLNCYCKEL 145
+W+ R L ++A L LV + G+ AE +F S+P + + LL+ Y
Sbjct: 89 EWITKRGIFDLSTEDFASRLCLVEISTGLKEAEKFFKSIPENMRDDSVHTTLLSLYT--- 145
Query: 146 MVNKALAHFDKMNELGYVTFLSFN---------NLIGMYMRLGQPLKVHELVHDMKERNI 196
++K H E Y T N ++I +Y LG+ + E++ MKE +
Sbjct: 146 -ISKKTRH---EAEATYQTMRVQNMLLKPYPYYSMIYLYALLGEKNMIDEILRQMKENGV 201
Query: 197 PMSA-FAYHAWMNSYAALNDLVGVEKIYELMKLEVET---KIDWLTYSNLAAIYVKAKQF 252
+ + +YA+L D+ +E LM LEVE + W T ++A Y+K
Sbjct: 202 EHDKNLTANNVLKAYASLPDVEAMEMF--LMGLEVEEPRFSLAWQTGISIAKAYLKGGSS 259
Query: 253 EKAELMLRKLEQAVKPRKRE-AYHCLLSLYAGTG 285
KA MLR+ E V + ++ A L+ +Y G
Sbjct: 260 RKAVEMLRRTELVVDTKSKDSANKVLMMMYWDAG 293
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 111/248 (44%), Gaps = 5/248 (2%)
Query: 130 NKYTYGALLNCYCKELMVNKALAHFDKMNELGYVT-FLSFNNLIGMYMRLGQPLKVHELV 188
+K TY L+ M +K + +KM E GYV+ + + +I +++LGQ E+
Sbjct: 539 DKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVY 598
Query: 189 HDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVK 248
+M E NI Y +N++A ++ E MK E + + Y++L +Y K
Sbjct: 599 KEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMK-EAGIPGNSVIYNSLIKLYTK 657
Query: 249 AKQFEKAELMLRKLEQAV-KPRKREAY--HCLLSLYAGTGNLEKVYSLWDSLKSVTPVLN 305
++AE + RKL Q+ K + + Y +C+++LY+ + K +++DS+K
Sbjct: 658 VGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANE 717
Query: 306 VSYLCMISALKRLNDMEGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALVFKD 365
++ M+ K+ E + K+ D ++V+ + +EA FK+
Sbjct: 718 FTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKE 777
Query: 366 AIKKSKGP 373
+ P
Sbjct: 778 MVSSGIQP 785
>AT1G43010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:16153609-16154468 FORWARD
LENGTH=257
Length = 257
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 110/234 (47%), Gaps = 14/234 (5%)
Query: 27 PAKGRSLYQRLSELEKTGMSASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIM 86
PA ++L R+ S L+Q+ +G L ++K L + F AL+
Sbjct: 32 PAANQTLPSRIKTDINQKASIIPLLEQWRKQGYEVNPSHLRGLIKNLSDCKNFTTALEAS 91
Query: 87 KWM-ESRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSLPPLAMNKYTYGALLNCYCKEL 145
KWM + V + A L LV G+ AE F ++P + Y LL+ Y K +
Sbjct: 92 KWMFKHSVFDNFPEDCAAQLHLVNTVLGLEEAEKMFKNIPEKMRD---YSVLLSSYTKPV 148
Query: 146 -MVNKALAHFDKMNELGYV--TFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFA 202
V+KA A F KM ELG++ +L FN++I +Y +L + V +L++ +K+ N+ + +
Sbjct: 149 RTVDKAEATFKKMRELGFLLKPYL-FNSMICLYGQLQRLDMVEKLLYKLKKNNMEVGSLK 207
Query: 203 YHAWMNSYAALNDLVGVEKIYELMKLE-VETKIDWLTYSNLAAIYVKAKQFEKA 255
+ YA +N +EK + E +E + D T +A Y +A EKA
Sbjct: 208 VNNVSRVYANIN---AMEKFKTWVSKEGIELERD--TIVAMAKAYHRAGSIEKA 256
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 115/255 (45%), Gaps = 7/255 (2%)
Query: 68 SIVKELRKYRRFQDALQIMKWMESRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSL--P 125
+++ L R+ DA ++++ M R P + +D K ++ A N + +
Sbjct: 224 TLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRR 283
Query: 126 PLAMNKYTYGALLNCYCKELMVNKALAHFDKMNELG-YVTFLSFNNLIGMYMRLGQPLKV 184
+ N +TY +L+N +C + A FD M G + +++N LI + + +
Sbjct: 284 SVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDG 343
Query: 185 HELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAA 244
+L +M + + AF Y+ ++ Y L +K++ M ++ D +TY+ L
Sbjct: 344 MKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRM-VDCGVSPDIVTYNILLD 402
Query: 245 IYVKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSL--KSVTP 302
+ EKA +M+ L+++ Y+ ++ T L++ + L+ SL K V P
Sbjct: 403 CLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKP 462
Query: 303 VLNVSYLCMISALKR 317
++Y+ MIS L R
Sbjct: 463 DA-IAYITMISGLCR 476
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 83/412 (20%), Positives = 170/412 (41%), Gaps = 67/412 (16%)
Query: 19 TAVTEADRPAKGRSLYQRLSELEKTGMSASQTLDQYISEGKVAGKKELMSIVKELRKYRR 78
+A++E R + S QRL+ + K Q L+ + + ++G R
Sbjct: 74 SAISEVQRSSDFLSSLQRLATVLKV-----QDLNVILRDFGISG---------------R 113
Query: 79 FQDALQIMKWMESRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSLP--PLAMNKYTYGA 136
+QD +Q+ +WM+ + + Y+ + V + V A + S+P +N Y +
Sbjct: 114 WQDLIQLFEWMQQHGKISVS-TYSSCIKFV-GAKNVSKALEIYQSIPDESTKINVYICNS 171
Query: 137 LLNCYCKELMVNKALAHFDKMNELGY-VTFLSFNNLIGMYMRL--GQPLKVHELVHDMKE 193
+L+C K ++ + FD+M G +++N L+ +++ G P K EL+ ++
Sbjct: 172 ILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYP-KAIELIGELPH 230
Query: 194 RNIPMSA-----------------------------------FAYHAWMNSYAALNDLVG 218
I M + + Y + +NSY+ D
Sbjct: 231 NGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKK 290
Query: 219 VEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQAVKPRKREAYHCLL 278
+++ MK + + + + L +Y+K F+++ +L +LE A Y L+
Sbjct: 291 ADELMTEMK-SIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLM 349
Query: 279 SLYAGTGNLEKVYSLWDSLKSVTPVLNVSYL--CMISALKRLNDMEGLIRCFKEWESRYG 336
+ G LE+ S++D +K V + Y MISAL R + ++ E+ Y
Sbjct: 350 DGLSKAGKLEEARSIFDDMKG-KGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYE 408
Query: 337 HCDLRLISAVISAYLSHDMSEEAALVFKDAIKKSKGPFFKIREMFMIFFLEK 388
CDL +++ ++ AY E + K +++ P + + + +F+++
Sbjct: 409 KCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKE 460
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 114/253 (45%), Gaps = 7/253 (2%)
Query: 68 SIVKELRKYRRFQDALQIMKWMESRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSLPPL 127
++V L R+ DA +++ M + +P Y+ LD KN V+ A+ F + +
Sbjct: 230 ALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM 289
Query: 128 AMNK--YTYGALLNCYCKELMVNKALAHFDKMNELGYVT-FLSFNNLIGMYMRLGQPLKV 184
+++ TY +L+N C +++A FD M G + +S+N LI + + +
Sbjct: 290 SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDG 349
Query: 185 HELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAA 244
+L +M +R + + Y+ + + D+ ++ + M + W TY+ L
Sbjct: 350 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIW-TYNILLG 408
Query: 245 IYVKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWD--SLKSVTP 302
+ EKA ++ +++ Y ++ TG +E+ +SL+ SLK + P
Sbjct: 409 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468
Query: 303 VLNVSYLCMISAL 315
+ V+Y M+S L
Sbjct: 469 DI-VTYTTMMSGL 480
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 107/236 (45%), Gaps = 8/236 (3%)
Query: 92 RVESPLDYNYAVHLDLVCKNEGVVAAENYFNSLP--PLAMNKYTYGALLNCYCKELMVNK 149
R+E + ++Y LD +CK + A +P + N +Y +++ + K ++
Sbjct: 369 RIEQDV-FSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDE 427
Query: 150 ALAHFDKMNELGY-VTFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMN 208
AL F +M LG + +S+N L+ +Y ++G+ + +++ +M I Y+A +
Sbjct: 428 ALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLG 487
Query: 209 SYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQAVKP 268
Y V+K++ MK E + LTYS L Y K +++A + R+ + A
Sbjct: 488 GYGKQGKYDEVKKVFTEMKRE-HVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLR 546
Query: 269 RKREAYHCLLSLYAGTGNLEKVYSLWDSL--KSVTPVLNVSYLCMISALKRLNDME 322
Y L+ G + SL D + + ++P + V+Y +I A R M+
Sbjct: 547 ADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNV-VTYNSIIDAFGRSATMD 601
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 152/378 (40%), Gaps = 58/378 (15%)
Query: 117 AENYFNSLPPLAM--NKYTYGALLNCYCKELMVNKALAHF-DKMNELGYVT-FLSFNNLI 172
A + FNS+ + N TY A+++ K M K +A F D+M G ++FN+L+
Sbjct: 287 AISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLL 346
Query: 173 GMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMN------------------------ 208
+ R G L +M R I F+Y+ ++
Sbjct: 347 AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIM 406
Query: 209 ----SYAALND-LVGVEKIYELMKLEVETK-----IDWLTYSNLAAIYVKAKQFEKAELM 258
SY+ + D + E + L E + +D ++Y+ L +IY K + E+A +
Sbjct: 407 PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDI 466
Query: 259 LRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKS--VTPVLNVSYLCMISALK 316
LR++ + Y+ LL Y G ++V ++ +K V P L ++Y +I
Sbjct: 467 LREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNL-LTYSTLIDGYS 525
Query: 317 RLNDMEGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALVFKDAIKKSKGPFFK 376
+ + + F+E++S D+ L SA+I A + + A + + K+ P
Sbjct: 526 KGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVV 585
Query: 377 IREMFMIFFLEKCQLD--------GAVSHLEAALSEVVGDEWRPTPRVLRAFVKYYKEET 428
+ F +D G++ +ALS + E RV++ F + E
Sbjct: 586 TYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGN---RVIQLFGQLTTESN 642
Query: 429 DL------DGVDELSKIL 440
+ +G+ ELS IL
Sbjct: 643 NRTTKDCEEGMQELSCIL 660
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/305 (20%), Positives = 128/305 (41%), Gaps = 47/305 (15%)
Query: 69 IVKELRKYRRFQDALQIMKWMESRVE---SPLDYNYAVHLDLVCKNE-------GVVAAE 118
++ LR+ + A++ +W E R E P YN + + C+N G ++
Sbjct: 68 VIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVA 127
Query: 119 NYFNSLPPLA---------------------MNKYTYGALLNCYCKELMVNKALAH---- 153
+ S+ M K+ + + Y + A+ H
Sbjct: 128 GFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMM 187
Query: 154 ---FDKMNELGY-VTFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNS 209
F +M ELGY T F LI + + G+ L+ +MK ++ Y+ ++S
Sbjct: 188 LTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDS 247
Query: 210 YAALNDLVGVEKIYELMKLEVET---KIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQAV 266
+ + + K + E+E K D +TY+++ + KA + ++A M LE+
Sbjct: 248 FGKVGKVDMAWKFFH----EIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNR 303
Query: 267 KPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKSVTPVLNV-SYLCMISALKRLNDMEGLI 325
+ AY+ ++ Y G ++ YSL + ++ + +V +Y C+++ L+++ ++ +
Sbjct: 304 RVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEAL 363
Query: 326 RCFKE 330
+ F+E
Sbjct: 364 KVFEE 368
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 124/282 (43%), Gaps = 6/282 (2%)
Query: 75 KYRRFQDALQIMKWMESRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSL--PPLAMNKY 132
K + A +K ME + P Y + C+ + + A + F+ + L N +
Sbjct: 461 KQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNF 520
Query: 133 TYGALLNCYCKELMVNKALAHFDKMNELGY-VTFLSFNNLIGMYMRLGQPLKVHELVHDM 191
TY L++ + K A ++MN + + +N +I ++GQ K E++ ++
Sbjct: 521 TYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNL 580
Query: 192 -KERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAK 250
KE+ MS +Y++ ++ + + D + Y M E + +T+++L + K+
Sbjct: 581 IKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMS-ENGKSPNVVTFTSLINGFCKSN 639
Query: 251 QFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKSVTPVLNVS-YL 309
+ + A M +++ AY L+ + +++ Y+L+ L + + NVS Y
Sbjct: 640 RMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYN 699
Query: 310 CMISALKRLNDMEGLIRCFKEWESRYGHCDLRLISAVISAYL 351
+IS + L M+ I +K+ + CDL + +I L
Sbjct: 700 SLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLL 741
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 105/221 (47%), Gaps = 5/221 (2%)
Query: 52 DQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWMESRVESPLDYNYAVHLDLVCKN 111
+ I +G V K ++ L K +R +DA ++ M+S S ++ Y++ +D + K
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325
Query: 112 EGVVAAENYFNSLPPLAMN--KYTYGALLNCYCKELMVNKALAHFDKMNELGYV-TFLSF 168
AA+ + + +N Y Y + KE ++ KA A FD M G + ++
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385
Query: 169 NNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKL 228
+LI Y R + +EL+ +MK+RNI +S + Y + + DL G I + M +
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEM-I 444
Query: 229 EVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKL-EQAVKP 268
+ + + Y+ L +++ +F A +L+++ EQ + P
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAP 485
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 118/268 (44%), Gaps = 11/268 (4%)
Query: 68 SIVKELRKYRRFQDALQIMKWMESRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSLPPL 127
S++ L K +R +A + M P + Y + + +A+ Y +
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551
Query: 128 AM--NKYTYGALLNCYCKELMVNKALAHFDKMNELGYVTFL-SFNNLIGMYMRLGQPLKV 184
+ NK L+N YCK+ V +A + + M + G + ++ L+ + +
Sbjct: 552 GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611
Query: 185 HELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAA 244
E+ +M+ + I F+Y +N ++ L ++ I++ M E T + + Y+ L
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP-NVIIYNMLLG 670
Query: 245 IYVKAKQFEKAELMLRKLEQAVKPRKREA--YHCLLSLYAGTGNLEKVYSLWD--SLKSV 300
+ ++ + EKA+ +L E +VK A Y ++ Y +G+L + + L+D LK +
Sbjct: 671 GFCRSGEIEKAKELLD--EMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728
Query: 301 TPVLNVSYLCMISALKRLNDMEGLIRCF 328
P V Y ++ RLND+E I F
Sbjct: 729 VPDSFV-YTTLVDGCCRLNDVERAITIF 755
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 109/242 (45%), Gaps = 10/242 (4%)
Query: 68 SIVKELRKYRRFQDALQIMKWMESRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSLPPL 127
S+V+ LRK + ++AL ++K + SP + Y +D +CK AE F+ + +
Sbjct: 337 SLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKI 396
Query: 128 AM--NKYTYGALLNCYCKELMVNKALAHFDKMNELGY-VTFLSFNNLIGMYMRLGQPLKV 184
+ N TY L++ +C+ ++ AL+ +M + G ++ +N+LI + + G
Sbjct: 397 GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA 456
Query: 185 HELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIY-ELMKLEVETKIDWLTYSNLA 243
+ +M + + + Y + M Y + + ++Y E+ + I T++ L
Sbjct: 457 EGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSI--YTFTTLL 514
Query: 244 AIYVKAKQFEKAELMLRKL-EQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSL--KSV 300
+ +A A + ++ E VKP R Y+ ++ Y G++ K + + K +
Sbjct: 515 SGLFRAGLIRDAVKLFNEMAEWNVKP-NRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGI 573
Query: 301 TP 302
P
Sbjct: 574 VP 575
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 104/224 (46%), Gaps = 5/224 (2%)
Query: 143 KELMVNKALAHFDKMNELGY-VTFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAF 201
K ++ L F +M + G +T S ++ R G+ K +L+ + + I A+
Sbjct: 201 KRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAY 260
Query: 202 AYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRK 261
Y+ +N+Y D GVE + ++MK + + +TY+ L + VK + AE + +
Sbjct: 261 TYNTIINAYVKQRDFSGVEGVLKVMKKD-GVVYNKVTYTLLMELSVKNGKMSDAEKLFDE 319
Query: 262 LEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSL--KSVTPVLNVSYLCMISALKRLN 319
+ + Y L+S GN+++ + L+D L K ++P + +Y +I + ++
Sbjct: 320 MRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPS-SYTYGALIDGVCKVG 378
Query: 320 DMEGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALVF 363
+M E +S+ + + + +I Y M +EA++++
Sbjct: 379 EMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIY 422
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 107/244 (43%), Gaps = 6/244 (2%)
Query: 58 GKVAGKKELMSIVKELRKYRRFQDALQIMKWMESRVESPLDYNYAVHLDLVCKNEGVVAA 117
G VA ++ ++ L K + ++ + M+ P Y Y ++ +CK+ A
Sbjct: 228 GLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDA 287
Query: 118 ENYFNSLPP--LAMNKYTYGALLNCYCKELMVNKALAHFDKMNELGY-VTFLSFNNLIGM 174
F+ + ++ N TY L+ C+E+ +N+A D+M G +++N LI
Sbjct: 288 FQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDG 347
Query: 175 YMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKI 234
+ +G+ K L D+K R + S Y+ ++ + D G K+ + M+ E K
Sbjct: 348 FCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEME-ERGIKP 406
Query: 235 DWLTYSNLAAIYVKAKQFEKA-ELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSL 293
+TY+ L + ++ EKA +L L E + P Y L+ + G + + L
Sbjct: 407 SKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVP-DVHTYSVLIHGFCIKGQMNEASRL 465
Query: 294 WDSL 297
+ S+
Sbjct: 466 FKSM 469
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 110/252 (43%), Gaps = 15/252 (5%)
Query: 130 NKYTYGALLNCYCKELMVNKALAHFDKMNELGY-VTFLSFNNLIGMYMRLGQPLKVHELV 188
N YTY ++N CK+ A FD+M E G +++N LIG R + + +++V
Sbjct: 267 NLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVV 326
Query: 189 HDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWL-----TYSNLA 243
MK I + Y+ ++ + GV K+ + + L + K L TY+ L
Sbjct: 327 DQMKSDGINPNLITYNTLIDGFC------GVGKLGKALSLCRDLKSRGLSPSLVTYNILV 380
Query: 244 AIYVKAKQFEKAELMLRKLEQ-AVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKSVTP 302
+ + + A M++++E+ +KP K Y L+ +A + N+EK L S++ +
Sbjct: 381 SGFCRKGDTSGAAKMVKEMEERGIKPSKV-TYTILIDTFARSDNMEKAIQLRLSMEELGL 439
Query: 303 VLNV-SYLCMISALKRLNDMEGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAAL 361
V +V +Y +I M R FK + + + + +I Y S A
Sbjct: 440 VPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALK 499
Query: 362 VFKDAIKKSKGP 373
+ K+ +K P
Sbjct: 500 LLKEMEEKELAP 511
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 5/208 (2%)
Query: 130 NKYTYGALLNCYCKELMVNKALAHFDKMNELGYVTF-LSFNNLIGMYMRLGQPLKVHELV 188
N Y L++ CK+ + KA F +M +LG V ++ LI + G + E+
Sbjct: 197 NVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMY 256
Query: 189 HDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVK 248
M+E + + + Y+ MN ++++ M+ E + +TY+ L +
Sbjct: 257 EKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMR-ERGVSCNIVTYNTLIGGLCR 315
Query: 249 AKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKS--VTPVLNV 306
+ +A ++ +++ Y+ L+ + G G L K SL LKS ++P L V
Sbjct: 316 EMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSL-V 374
Query: 307 SYLCMISALKRLNDMEGLIRCFKEWESR 334
+Y ++S R D G + KE E R
Sbjct: 375 TYNILVSGFCRKGDTSGAAKMVKEMEER 402
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/322 (19%), Positives = 134/322 (41%), Gaps = 5/322 (1%)
Query: 47 ASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWMESRVESPLDYNYAVHLD 106
A +DQ + G +++ L + + +A+ ++ M R P Y ++
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 107 LVCKNEGVVAAENYFNSLPP--LAMNKYTYGALLNCYCKELMVNKALAHFDKMNELGY-V 163
+CK + A N N + + N + +++ CK V A+ F +M G
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP 291
Query: 164 TFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIY 223
+++N+LI G+ L+ +M E+ I + ++A ++++ LV EK++
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLH 351
Query: 224 ELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAG 283
E M ++ D +TY+ L + + ++A+ M + + + Y+ L++ +
Sbjct: 352 EEM-IQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCK 410
Query: 284 TGNLEKVYSLWDSLKSVTPVLN-VSYLCMISALKRLNDMEGLIRCFKEWESRYGHCDLRL 342
+E L+ + V N V+Y +I + D + FK+ S D+
Sbjct: 411 CKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMT 470
Query: 343 ISAVISAYLSHDMSEEAALVFK 364
S ++ S+ + A ++FK
Sbjct: 471 YSILLHGLCSYGKLDTALVIFK 492
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 136/323 (42%), Gaps = 7/323 (2%)
Query: 47 ASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWMESRVESPLDYNYAVHLD 106
A +DQ + G +++ L + + +A+ ++ M R P Y V ++
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 233
Query: 107 LVCKNEGVVAAENYFNSL--PPLAMNKYTYGALLNCYCKELMVNKALAHFDKMNELGY-V 163
+CK + A N N + + N Y +++ CK + AL F +M G
Sbjct: 234 GLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 293
Query: 164 TFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIY 223
+++++LI + L+ DM ER I + ++A ++++ LV EK+Y
Sbjct: 294 NVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLY 353
Query: 224 -ELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYA 282
E++K ++ D TYS+L + + ++A+ M + Y+ L++ +
Sbjct: 354 DEMIKRSIDP--DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFC 411
Query: 283 GTGNLEKVYSLWDSLKSVTPVLN-VSYLCMISALKRLNDMEGLIRCFKEWESRYGHCDLR 341
+++ L+ + V N V+Y +I + D + FK+ S H ++
Sbjct: 412 KAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIM 471
Query: 342 LISAVISAYLSHDMSEEAALVFK 364
+ ++ + E+A +VF+
Sbjct: 472 TYNTLLDGLCKNGKLEKAMVVFE 494
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 137/317 (43%), Gaps = 19/317 (5%)
Query: 68 SIVKELRKYRRFQDALQIMKWMESRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSLPPL 127
+++ L KYR DAL + ME++ P Y+ + +C E A + +
Sbjct: 265 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER 324
Query: 128 AMNK--YTYGALLNCYCKELMVNKALAHFDKMNELG----YVTFLSFNNLIGMYMRLGQP 181
+N T+ AL++ + KE + +A +D+M + T+ S N M+ RL +
Sbjct: 325 KINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 384
Query: 182 LKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDL-VGVEKIYELMKLEVETKIDWLTYS 240
+ EL M ++ + Y+ +N + + GVE E+ + + + +TY+
Sbjct: 385 KHMFEL---MISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVG--NTVTYT 439
Query: 241 NLAAIYVKAKQFEKAELMLRKL-EQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLK- 298
L + +A+ + A+++ +++ V P Y+ LL G LEK +++ L+
Sbjct: 440 TLIHGFFQARDCDNAQMVFKQMVSDGVHPNIM-TYNTLLDGLCKNGKLEKAMVVFEYLQR 498
Query: 299 -SVTPVLNVSYLCMISALKRLNDMEGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSE 357
+ P + +Y MI + + +E F + D+ + + +IS + + E
Sbjct: 499 SKMEPTI-YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKE 557
Query: 358 EAALVFKDAIKKSKGPF 374
EA +F+ + GP
Sbjct: 558 EADALFRKM--REDGPL 572
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 125/271 (46%), Gaps = 9/271 (3%)
Query: 68 SIVKELRKYRRFQDALQIMKWMESRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSLPPL 127
S++ L Y R+ DA +++ M R +P + ++ +D K +V AE ++ +
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 128 AMNK--YTYGALLNCYCKELMVNKALAHFDKM-NELGYVTFLSFNNLIGMYMRLGQPLKV 184
+++ TY +L+N +C +++A F+ M ++ + +++N LI + + + +
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Query: 185 HELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIY-ELMKLEVETKIDWLTYSNLA 243
E+ +M +R + + Y+ + D ++I+ E++ V I +TY+ L
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNI--MTYNTLL 473
Query: 244 AIYVKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWD--SLKSVT 301
K + EKA ++ L+++ Y+ ++ G +E + L+ SLK V
Sbjct: 474 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK 533
Query: 302 PVLNVSYLCMISALKRLNDMEGLIRCFKEWE 332
P + V+Y MIS R E FKE +
Sbjct: 534 PDV-VAYNTMISGFCRKGSKEEADALFKEMK 563
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/422 (19%), Positives = 165/422 (39%), Gaps = 32/422 (7%)
Query: 26 RPAKGRSLYQRLSELEKTGMSASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQI 85
R G++ Y +L + G+S + D +++ E+ K R F ++
Sbjct: 38 RAFSGKTSYDYREKLSRNGLSELKLDDA-------------VALFGEMVKSRPFPSIIEF 84
Query: 86 MKWMESRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSLPPLAMNKYTYGALLNCYCKEL 145
K + S + ++ + L +N G+ N YTY L+NC+C+
Sbjct: 85 SKLL-SAIAKMNKFDVVISLGEQMQNLGI-------------PHNHYTYSILINCFCRRS 130
Query: 146 MVNKALAHFDKMNELGY-VTFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYH 204
+ ALA KM +LGY ++ ++L+ Y + + LV M + ++
Sbjct: 131 QLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFN 190
Query: 205 AWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQ 264
++ N + + M + + D +TY + K + A +L K+EQ
Sbjct: 191 TLIHGLFLHNKASEAMALIDRM-VAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQ 249
Query: 265 AVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSL--KSVTPVLNVSYLCMISALKRLNDME 322
Y+ ++ +++ +L+ + K + P + V+Y +IS L
Sbjct: 250 GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNV-VTYSSLISCLCNYGRWS 308
Query: 323 GLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALVFKDAIKKSKGPFFKIREMFM 382
R + R + D+ SA+I A++ EA ++ + +K+S P +
Sbjct: 309 DASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI 368
Query: 383 IFFLEKCQLDGAVSHLEAALSEVVGDEWRPTPRVLRAFVKYYKEETDLDGVDELSKILMT 442
F +LD A E +S+ + +++ F KY + E ++ E+S+ +
Sbjct: 369 NGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 428
Query: 443 HN 444
N
Sbjct: 429 GN 430
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 93/207 (44%), Gaps = 6/207 (2%)
Query: 123 SLPPLAMNKYTYGALLNCYCKELMVNKALAHFDKMNELGY-VTFLSFNNLIGMYMRLGQP 181
+L ++ N++TY ++ Y KA +F ++ G V ++ L+ + G+
Sbjct: 651 TLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRM 710
Query: 182 LKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSN 241
+ +M RNIP ++F Y+ ++ +A D+ + + MK E K D TY++
Sbjct: 711 QSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKE-GVKPDIHTYTS 769
Query: 242 LAAIYVKAKQFEKAELMLRKLEQ-AVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKS- 299
+ KA +A + ++E VKP + Y L+ +A EK S ++ +K+
Sbjct: 770 FISACSKAGDMNRATQTIEEMEALGVKPNIK-TYTTLIKGWARASLPEKALSCYEEMKAM 828
Query: 300 -VTPVLNVSYLCMISALKRLNDMEGLI 325
+ P V + + S L R + E I
Sbjct: 829 GIKPDKAVYHCLLTSLLSRASIAEAYI 855
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 103/232 (44%), Gaps = 9/232 (3%)
Query: 133 TYGALLNCYCKELMVNKALAHFDKMNELGYV-TFLSFNNLIGMYMRLGQPLKVHELVHDM 191
T+ +++ Y K + ++L FD M G V T +FN LI + Q K E++ +M
Sbjct: 591 TFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEM 650
Query: 192 KERNIPMSAFAYHAWMNSYAALNDLVGVEKIYE-LMKLEVET-KIDWLTYSNLAAIYVKA 249
+ + Y M YA++ D K +E +L+ E +D TY L K+
Sbjct: 651 TLAGVSANEHTYTKIMQGYASVGD---TGKAFEYFTRLQNEGLDVDIFTYEALLKACCKS 707
Query: 250 KQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLK--SVTPVLNVS 307
+ + A + +++ PR Y+ L+ +A G++ + L +K V P ++ +
Sbjct: 708 GRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIH-T 766
Query: 308 YLCMISALKRLNDMEGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSEEA 359
Y ISA + DM + +E E+ +++ + +I + + E+A
Sbjct: 767 YTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKA 818
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 93/207 (44%), Gaps = 7/207 (3%)
Query: 126 PLAMNKYTYGALLNCYCKELMVNKALAHFDKMNELGYV-TFLSFNNLIGMYMRLGQPLKV 184
P+A+ Y +++ Y K L F ++ E G+ T +++ LI +Y ++G+ K
Sbjct: 448 PIAI----YHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKA 503
Query: 185 HELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAA 244
E+ MKE + + Y +N + L D ++E M E K D + Y+N+ +
Sbjct: 504 LEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKE-GMKPDVILYNNIIS 562
Query: 245 IYVKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKSVTPVL 304
+ ++A ++++++ + ++ YA +G++ + ++D ++ V
Sbjct: 563 AFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVP 622
Query: 305 NV-SYLCMISALKRLNDMEGLIRCFKE 330
V ++ +I+ L ME + E
Sbjct: 623 TVHTFNGLINGLVEKRQMEKAVEILDE 649
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/308 (19%), Positives = 129/308 (41%), Gaps = 17/308 (5%)
Query: 130 NKYTYGALLNCYCKELMVNKALAHFDKMNELGYV-TFLSFNNLIGMYMRLGQPL-KVHEL 187
++ +G ++ Y + +++A F++M G T + +LI Y +G+ + +
Sbjct: 308 SRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYA-VGRDMDEALSC 366
Query: 188 VHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYV 247
V MKE I MS Y + ++ + ++ K + ++ Y + +
Sbjct: 367 VRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAK-RIHKTLNASIYGKIIYAHC 425
Query: 248 KAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLK--SVTPVLN 305
+ E+AE ++R++E+ YH ++ Y + +K ++ LK TP +
Sbjct: 426 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTV- 484
Query: 306 VSYLCMISALKRLNDMEGLI---RCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALV 362
V+Y C+I+ ++ + + R KE ++ +L+ S +I+ ++ A V
Sbjct: 485 VTYGCLINLYTKVGKISKALEVSRVMKEEGVKH---NLKTYSMMINGFVKLKDWANAFAV 541
Query: 363 FKDAIKKSKGPFFKIREMFMIFFLEKCQLDGAVSHLEAALSEVVGDEWRPTPRVLRAFVK 422
F+D +K+ P + + F +D A+ + E+ RPT R +
Sbjct: 542 FEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQ----TVKEMQKLRHRPTTRTFMPIIH 597
Query: 423 YYKEETDL 430
Y + D+
Sbjct: 598 GYAKSGDM 605
>AT2G20720.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8928009-8928908 REVERSE
LENGTH=299
Length = 299
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 9/152 (5%)
Query: 184 VHELVHDMKERNIPMSAFAYHAWMNSY--AALNDLVGVEKIYELMKLEVETKIDWLTYSN 241
V +L+ +M E+ + + + SY A++ D+ GVEK L K EV + W T+
Sbjct: 14 VVKLLGEMDEKKMQPQGLCFVKLLTSYSMASVVDVQGVEKF--LSKWEVMIQDKWTTFYF 71
Query: 242 LAAIYVKAKQFEKAELMLRKLEQAVKPRKRE-AYHCLLSLYAGTGNLEKVYSLWDSLKSV 300
+Y++A EK +LR+ E V RE Y CL+++Y E VY LW+ K
Sbjct: 72 PGLVYIRAGFMEKGLALLRRSETFVDDGCREIIYGCLMTVYCNENLTEDVYRLWNLAKDY 131
Query: 301 TPVLNVSYLC-MISALKRLNDMEGLIRCFKEW 331
+ S ++ A + D++G++ +EW
Sbjct: 132 GISFDSSRCSDIVKAFTKKGDLDGVM---EEW 160
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 108/239 (45%), Gaps = 7/239 (2%)
Query: 82 ALQIMKWMESRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSL--PPLAMNKYTYGALLN 139
AL + + ME R Y++ +D +CK+ A + FN + + + TY +L+
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 140 CYCKELMVNKALAHFDKMNELGYVT-FLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPM 198
C + + +M + ++F+ LI ++++ G+ L+ EL ++M R I
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348
Query: 199 SAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELM 258
Y++ ++ + N L ++++LM + + D +TYS L Y KAK+ + +
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLM-VSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 259 LRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSL--KSVTPVLNVSYLCMISAL 315
R++ Y+ L+ + +G L L+ + + V P + V+Y ++ L
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV-VTYGILLDGL 465
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/314 (19%), Positives = 126/314 (40%), Gaps = 7/314 (2%)
Query: 127 LAMNKYTYGALLNCYCKELMVNKALAHFDKMNELGYVT-FLSFNNLIGMYMRLGQPLKVH 185
L N Y YG+++ C+ + +A F +M G + + + LI + + G
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371
Query: 186 ELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAI 245
+ ++M R+I Y A ++ + + D+V K++ M + + D +T++ L
Sbjct: 372 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK-GLEPDSVTFTELING 430
Query: 246 YVKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKSVTPVLN 305
Y KA + A + + QA Y L+ G+L+ L + + N
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 306 V-SYLCMISALKRLNDMEGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALVFK 364
+ +Y +++ L + ++E ++ E+E+ + D + ++ AY ++A + K
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Query: 365 DAIKKSKGPFFKIREMFMIFFLEKCQLDGAVSHLEAALSEVVGDEWRPTPRVLRAFVKYY 424
+ + K P + M F L G + E L+ ++ P + VK Y
Sbjct: 551 EMLGKGLQPTIVTFNVLMNGFC----LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 425 KEETDLDGVDELSK 438
+L + K
Sbjct: 607 CIRNNLKAATAIYK 620
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/335 (20%), Positives = 141/335 (42%), Gaps = 17/335 (5%)
Query: 47 ASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWMESRVESPLDYNYAVHLD 106
A + + I +G + +++ K + A + M SR +P Y +
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Query: 107 LVCKNEGVVAAENYFNSL--PPLAMNKYTYGALLNCYCKELMVNKALAHFDKMNELGYV- 163
C+ +V A F+ + L + T+ L+N YCK + A + M + G
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 164 TFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKI- 222
+++ LI + G +EL+H+M + + + F Y++ +N ++ K+
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 223 --YELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRK-LEQAVKPRKREAYHCLLS 279
+E L +T +TY+ L Y K+ + +KA+ +L++ L + ++P ++ L++
Sbjct: 515 GEFEAAGLNADT----VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP-TIVTFNVLMN 569
Query: 280 LYAGTGNLEKVYSL--WDSLKSVTPVLNVSYLCMISALKRLNDMEGLIRCFKEWESRYGH 337
+ G LE L W K + P ++ ++ N+++ +K+ SR
Sbjct: 570 GFCLHGMLEDGEKLLNWMLAKGIAPNAT-TFNSLVKQYCIRNNLKAATAIYKDMCSRGVG 628
Query: 338 CDLRLISAVISAYLSHDMSEEAALVFKDAIKKSKG 372
D + ++ + +EA +F++ K KG
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEM--KGKG 661
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/314 (19%), Positives = 126/314 (40%), Gaps = 7/314 (2%)
Query: 127 LAMNKYTYGALLNCYCKELMVNKALAHFDKMNELGYVT-FLSFNNLIGMYMRLGQPLKVH 185
L N Y YG+++ C+ + +A F +M G + + + LI + + G
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371
Query: 186 ELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAI 245
+ ++M R+I Y A ++ + + D+V K++ M + + D +T++ L
Sbjct: 372 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK-GLEPDSVTFTELING 430
Query: 246 YVKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKSVTPVLN 305
Y KA + A + + QA Y L+ G+L+ L + + N
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 306 V-SYLCMISALKRLNDMEGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALVFK 364
+ +Y +++ L + ++E ++ E+E+ + D + ++ AY ++A + K
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Query: 365 DAIKKSKGPFFKIREMFMIFFLEKCQLDGAVSHLEAALSEVVGDEWRPTPRVLRAFVKYY 424
+ + K P + M F L G + E L+ ++ P + VK Y
Sbjct: 551 EMLGKGLQPTIVTFNVLMNGFC----LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 425 KEETDLDGVDELSK 438
+L + K
Sbjct: 607 CIRNNLKAATAIYK 620
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/335 (20%), Positives = 141/335 (42%), Gaps = 17/335 (5%)
Query: 47 ASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWMESRVESPLDYNYAVHLD 106
A + + I +G + +++ K + A + M SR +P Y +
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Query: 107 LVCKNEGVVAAENYFNSL--PPLAMNKYTYGALLNCYCKELMVNKALAHFDKMNELGYV- 163
C+ +V A F+ + L + T+ L+N YCK + A + M + G
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 164 TFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKI- 222
+++ LI + G +EL+H+M + + + F Y++ +N ++ K+
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 223 --YELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRK-LEQAVKPRKREAYHCLLS 279
+E L +T +TY+ L Y K+ + +KA+ +L++ L + ++P ++ L++
Sbjct: 515 GEFEAAGLNADT----VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP-TIVTFNVLMN 569
Query: 280 LYAGTGNLEKVYSL--WDSLKSVTPVLNVSYLCMISALKRLNDMEGLIRCFKEWESRYGH 337
+ G LE L W K + P ++ ++ N+++ +K+ SR
Sbjct: 570 GFCLHGMLEDGEKLLNWMLAKGIAPNAT-TFNSLVKQYCIRNNLKAATAIYKDMCSRGVG 628
Query: 338 CDLRLISAVISAYLSHDMSEEAALVFKDAIKKSKG 372
D + ++ + +EA +F++ K KG
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEM--KGKG 661
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 145/326 (44%), Gaps = 22/326 (6%)
Query: 68 SIVKELRKYRRFQDALQIMKWMESRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSLP-- 125
+++K K F AL + M +P Y + +CK + A + + +
Sbjct: 315 TLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR 374
Query: 126 PLAMNKYTYGALLNCYCKELMVNKALAHFDKMNELGYV-TFLSFNNLIGMYMRLGQPLKV 184
L N+ TY L++ + ++ +N+A +MN+ G+ + +++N LI + G+
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDA 434
Query: 185 HELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAA 244
++ DMKE+ + +Y ++ + D+ ++ M +E K D +TYS+L
Sbjct: 435 IAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM-VEKGIKPDTITYSSLIQ 493
Query: 245 IYVKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSL--KSVTP 302
+ + ++ ++A + ++ + P Y L++ Y G+LEK L + + K V P
Sbjct: 494 GFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLP 553
Query: 303 VLNVSYLCMISALKRLNDMEG----LIRCFKE--------WESRYGHC---DLRLISAVI 347
+ V+Y +I+ L + + L++ F E + + +C + + + ++I
Sbjct: 554 DV-VTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLI 612
Query: 348 SAYLSHDMSEEAALVFKDAIKKSKGP 373
+ M EA VF+ + K+ P
Sbjct: 613 KGFCMKGMMTEADQVFESMLGKNHKP 638
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 125/311 (40%), Gaps = 8/311 (2%)
Query: 69 IVKELRKYRRFQDALQIMKWMESRVESPLDYNYAVHLDLVCKNEGVVA-AENYFNSL--P 125
+VK + AL I+ ++ P +Y LD +++ ++ AEN F +
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199
Query: 126 PLAMNKYTYGALLNCYCKELMVNKALAHFDKMNELGYV-TFLSFNNLIGMYMRLGQPLKV 184
++ N +TY L+ +C ++ AL FDKM G + +++N LI Y +L +
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 185 HELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAA 244
+L+ M + + + +Y+ +N + V + M + +D +TY+ L
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYS-LDEVTYNTLIK 318
Query: 245 IYVKAKQFEKAELM-LRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKSVTPV 303
Y K F +A +M L + P Y L+ GN+ + D ++
Sbjct: 319 GYCKEGNFHQALVMHAEMLRHGLTPSVI-TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLC 377
Query: 304 LN-VSYLCMISALKRLNDMEGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALV 362
N +Y ++ + M R +E + +A+I+ + E+A V
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAV 437
Query: 363 FKDAIKKSKGP 373
+D +K P
Sbjct: 438 LEDMKEKGLSP 448
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/329 (20%), Positives = 141/329 (42%), Gaps = 6/329 (1%)
Query: 47 ASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWMESRVESPLDYNYAVHLD 106
A +DQ + G +++ L + + +A+ ++ M R P Y V ++
Sbjct: 99 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 158
Query: 107 LVCKNEGVVAAENYFNSL--PPLAMNKYTYGALLNCYCKELMVNKALAHFDKMNELGY-V 163
+CK + A N N + + + + +++ CK V+ AL F +M G
Sbjct: 159 GLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 218
Query: 164 TFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIY 223
+++++LI G+ +L+ DM E+ I + ++A ++++ V EK++
Sbjct: 219 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLH 278
Query: 224 ELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAG 283
+ M ++ D TY++L + + +KA+ M + + Y+ L+ +
Sbjct: 279 DDM-IKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 337
Query: 284 TGNLEKVYSLWDSLKSVTPVLN-VSYLCMISALKRLNDMEGLIRCFKEWESRYGHCDLRL 342
+ +E L+ + V + V+Y +I L D + + FK+ S D+
Sbjct: 338 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 397
Query: 343 ISAVISAYLSHDMSEEAALVFKDAIKKSK 371
S ++ ++ E+A VF D ++KS+
Sbjct: 398 YSILLDGLCNNGKLEKALEVF-DYMQKSE 425
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 139/329 (42%), Gaps = 6/329 (1%)
Query: 47 ASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWMESRVESPLDYNYAVHLD 106
A +DQ + G +++ L + + +A+ ++ M R P Y V ++
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 233
Query: 107 LVCKNEGVVAAENYFNSL--PPLAMNKYTYGALLNCYCKELMVNKALAHFDKMNELGY-V 163
+CK A N N + + + + +++ CK V+ AL F +M G
Sbjct: 234 GLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 293
Query: 164 TFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIY 223
+++++LI G+ +L+ DM E+ I + ++A ++++ V EK+Y
Sbjct: 294 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLY 353
Query: 224 ELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAG 283
+ M ++ D TY++L + + +KA+ M + Y+ L+ +
Sbjct: 354 DDM-IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412
Query: 284 TGNLEKVYSLWDSLKSVTPVLN-VSYLCMISALKRLNDMEGLIRCFKEWESRYGHCDLRL 342
+ +E L+ + V + V+Y +I L D + + FK+ S D+
Sbjct: 413 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 472
Query: 343 ISAVISAYLSHDMSEEAALVFKDAIKKSK 371
S ++ ++ E+A VF D ++KS+
Sbjct: 473 YSILLDGLCNNGKLEKALEVF-DYMQKSE 500
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 147/348 (42%), Gaps = 17/348 (4%)
Query: 30 GRSLYQRLSELEKTGMSASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWM 89
G L R+SE A + +D+ + G L ++V L + DA+ ++ M
Sbjct: 151 GLCLEGRVSE-------ALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM 203
Query: 90 ESRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSLP--PLAMNKYTYGALLNCYCKELMV 147
P + Y L ++CK+ A + + ++ Y +++ CK+ +
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL 263
Query: 148 NKALAHFDKMNELGY-VTFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAW 206
+ A F++M G+ + + LI + G+ +L+ DM +R I A+ A
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL 323
Query: 207 MNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLR-KLEQA 265
++ + L E++++ M ++ D +TY++L + K Q +KA ML + +
Sbjct: 324 IDCFVKEGKLREAEELHKEM-IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 266 VKPRKREAYHCLLSLYAGTGNLEKVYSLWD--SLKSVTPVLNVSYLCMISALKRLNDMEG 323
P R ++ L++ Y ++ L+ SL+ V V+Y +I L +E
Sbjct: 383 CGPNIR-TFNILINGYCKANLIDDGLELFRKMSLRGVVAD-TVTYNTLIQGFCELGKLEV 440
Query: 324 LIRCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALVFKDAIKKSK 371
F+E SR D+ ++ + E+A +F + I+KSK
Sbjct: 441 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIF-EKIEKSK 487
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 79/377 (20%), Positives = 158/377 (41%), Gaps = 21/377 (5%)
Query: 56 SEGKVAGKKELMSIVKELRKYRRFQDALQIMKWMESRVESP--LDYNYAVHLDLVCKNEG 113
+GKV+ ++ L S + ++++ DA+ + + M P +D++ + K
Sbjct: 34 GKGKVSYRERLRSGIVDIKE----DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYD 89
Query: 114 VVAAENYFNSLPPLAMNKYTYGALLNCYCKELMVNKALAHFDKMNELGY----VTFLSFN 169
+V L +A N YT ++NC C+ ++ A + K+ +LGY VTF +
Sbjct: 90 LVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLI 149
Query: 170 NLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLE 229
N + + R+ + L ELV M E + +A +N LN V + +E
Sbjct: 150 NGLCLEGRVSEAL---ELVDRMVEMGHKPTLITLNALVNGL-CLNGKVSDAVLLIDRMVE 205
Query: 230 VETKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEK 289
+ + +TY + + K+ Q A +LRK+E+ Y ++ G+L+
Sbjct: 206 TGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDN 265
Query: 290 VYSLWDSLK----SVTPVLNVSYLCMISALKRLNDMEGLIRCFKEWESRYGHCDLRLISA 345
++L++ ++ ++ + + R +D L+R + R D+ SA
Sbjct: 266 AFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLR---DMIKRKITPDVVAFSA 322
Query: 346 VISAYLSHDMSEEAALVFKDAIKKSKGPFFKIREMFMIFFLEKCQLDGAVSHLEAALSEV 405
+I ++ EA + K+ I++ P + F ++ QLD A L+ +S+
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 406 VGDEWRPTPRVLRAFVK 422
G R ++ + K
Sbjct: 383 CGPNIRTFNILINGYCK 399
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 129/289 (44%), Gaps = 9/289 (3%)
Query: 47 ASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWME-SRVESPLDYNYAVHL 105
A +D+ ++ G ++V L K AL ++K ME ++E+ + Y +
Sbjct: 204 AVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADV-VIYTTII 262
Query: 106 DLVCKNEGVVAAENYFNSLPPLAM--NKYTYGALLNCYCKELMVNKALAHFDKMNELGY- 162
D +C + V A N F + + N TY +L+ C C + A M E
Sbjct: 263 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 322
Query: 163 VTFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKI 222
++F+ LI +++ G+ ++ +L +M +R+I F Y + +N + + L + +
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Query: 223 YELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYA 282
+ELM + + + +TY+ L + KAK+ E+ + R++ Q Y+ L+
Sbjct: 383 FELM-ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 441
Query: 283 GTGNLEKVYSLWDSLKS--VTPVLNVSYLCMISALKRLNDMEGLIRCFK 329
G+ + ++ + S V P + ++Y ++ L + +E + F+
Sbjct: 442 QAGDCDMAQKIFKKMVSDGVPPDI-ITYSILLDGLCKYGKLEKALVVFE 489
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 16/213 (7%)
Query: 85 IMKWMESRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSL------PPLAMNKYTYGALL 138
++ M S P + V +D K + E F SL P L T+ +++
Sbjct: 265 VLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLP----TFNSMI 320
Query: 139 NCYCKELMVNKALAHFDKMNELGYV-TFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIP 197
Y K M++KA F KMN++ Y+ +F+++ +I MY G + E+ ++ E +
Sbjct: 321 INYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRV 380
Query: 198 MSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAEL 257
+ A +A + Y + +K++ D TY L Y KA E+ ++
Sbjct: 381 LKASTLNAMLEVYCRNGLYIEADKLFHNASA-FRVHPDASTYKFLYKAYTKADMKEQVQI 439
Query: 258 MLRKLEQ-AVKPRKR---EAYHCLLSLYAGTGN 286
+++K+E+ + P KR EA S G+G+
Sbjct: 440 LMKKMEKDGIVPNKRFFLEALEVFGSRLPGSGS 472
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 16/213 (7%)
Query: 85 IMKWMESRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSL------PPLAMNKYTYGALL 138
++ M S P + V +D K + E F SL P L T+ +++
Sbjct: 265 VLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLP----TFNSMI 320
Query: 139 NCYCKELMVNKALAHFDKMNELGYV-TFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIP 197
Y K M++KA F KMN++ Y+ +F+++ +I MY G + E+ ++ E +
Sbjct: 321 INYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRV 380
Query: 198 MSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAEL 257
+ A +A + Y + +K++ D TY L Y KA E+ ++
Sbjct: 381 LKASTLNAMLEVYCRNGLYIEADKLFHNAS-AFRVHPDASTYKFLYKAYTKADMKEQVQI 439
Query: 258 MLRKLEQ-AVKPRKR---EAYHCLLSLYAGTGN 286
+++K+E+ + P KR EA S G+G+
Sbjct: 440 LMKKMEKDGIVPNKRFFLEALEVFGSRLPGSGS 472
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 125/292 (42%), Gaps = 15/292 (5%)
Query: 78 RFQDALQIMKWMESRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSL--PPLAMNKYTYG 135
R+ D ++++ M R SP ++V +D K + A+ + +A N TY
Sbjct: 313 RWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYN 372
Query: 136 ALLNCYCKELMVNKALAHFDKMNELGY-VTFLSFNNLIGMYMRLGQPLKVHELVHDMKER 194
+L++ +CKE + +A+ D M G ++FN LI Y + + EL +M R
Sbjct: 373 SLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLR 432
Query: 195 NIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEK 254
+ + Y+ + + L +K+++ M + + D ++Y L + EK
Sbjct: 433 GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM-VSRRVRPDIVSYKILLDGLCDNGELEK 491
Query: 255 AELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKSVTPVLNV-----SYL 309
A + K+E++ Y ++ G N KV WD S+ P+ V +Y
Sbjct: 492 ALEIFGKIEKSKMELDIGIYMIIIH---GMCNASKVDDAWDLFCSL-PLKGVKLDARAYN 547
Query: 310 CMISALKRLNDMEGLIRCFKEWESRYGHCDLRLI-SAVISAYLSHDMSEEAA 360
MIS L R + + F++ + GH L + +I A+L D + AA
Sbjct: 548 IMISELCRKDSLSKADILFRKM-TEEGHAPDELTYNILIRAHLGDDDATTAA 598
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/333 (18%), Positives = 132/333 (39%), Gaps = 42/333 (12%)
Query: 73 LRKYRRFQDALQIMKWMESRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSLPPLAMNKY 132
+ K ++++ L + K MES+ + Y ++ ++ C+ + A + + L
Sbjct: 98 IAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPD 157
Query: 133 T--YGALLNCYCKELMVNKALAHFDKMNELGY-VTFLSFNNLIG---------------- 173
T + LLN C E V++AL D+M E+G+ T ++ N L+
Sbjct: 158 TVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLID 217
Query: 174 -------------------MYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNSYAALN 214
+ + GQ EL+ M+ERNI + A Y ++
Sbjct: 218 RMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDG 277
Query: 215 DLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQAVKPRKREAY 274
L ++ M+++ K D +TY+ L + A +++ +LR + + +
Sbjct: 278 SLDNAFNLFNEMEIK-GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTF 336
Query: 275 HCLLSLYAGTGNLEKVYSLWDSL--KSVTPVLNVSYLCMISALKRLNDMEGLIRCFKEWE 332
L+ + G L + L + + + P ++Y +I + N +E I+
Sbjct: 337 SVLIDSFVKEGKLREADQLLKEMMQRGIAPN-TITYNSLIDGFCKENRLEEAIQMVDLMI 395
Query: 333 SRYGHCDLRLISAVISAYLSHDMSEEAALVFKD 365
S+ D+ + +I+ Y + ++ +F++
Sbjct: 396 SKGCDPDIMTFNILINGYCKANRIDDGLELFRE 428
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/347 (19%), Positives = 147/347 (42%), Gaps = 15/347 (4%)
Query: 30 GRSLYQRLSELEKTGMSASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWM 89
G L R+SE A + +D+ + G L ++V L + DA+ ++ M
Sbjct: 167 GLCLECRVSE-------ALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRM 219
Query: 90 ESRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSLPP--LAMNKYTYGALLNCYCKELMV 147
P + Y L+++CK+ A + + ++ Y +++ CK+ +
Sbjct: 220 VETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSL 279
Query: 148 NKALAHFDKMNELGY-VTFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAW 206
+ A F++M G+ +++N LIG + G+ +L+ DM +R I + +
Sbjct: 280 DNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVL 339
Query: 207 MNSYAALNDLVGVEKIY-ELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQA 265
++S+ L +++ E+M+ + + +TY++L + K + E+A M+ +
Sbjct: 340 IDSFVKEGKLREADQLLKEMMQRGIAP--NTITYNSLIDGFCKENRLEEAIQMVDLMISK 397
Query: 266 VKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKSVTPVLN-VSYLCMISALKRLNDMEGL 324
++ L++ Y ++ L+ + + N V+Y ++ + +E
Sbjct: 398 GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVA 457
Query: 325 IRCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALVFKDAIKKSK 371
+ F+E SR D+ ++ + E+A +F I+KSK
Sbjct: 458 KKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFG-KIEKSK 503
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 6/200 (3%)
Query: 68 SIVKELRKYRRFQDALQIMKWMESRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSL--P 125
+++K L K +DA ++K M+ P + +++ D NE AA + +
Sbjct: 289 TLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDS 348
Query: 126 PLAMNKYTYGALLNCYCKELMVNKALAHFDKMNELGYV-TFLSFNNLIGMYMRLGQPLKV 184
+ MN YT LLN CKE + KA + G V + +N +I Y R G +
Sbjct: 349 GVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGA 408
Query: 185 HELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLE-VETKIDWLTYSNLA 243
+ M+++ + AY+ + + L ++ EK MKL+ V ++ TY+ L
Sbjct: 409 RMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVE--TYNILI 466
Query: 244 AIYVKAKQFEKAELMLRKLE 263
Y + +F+K +L+++E
Sbjct: 467 GGYGRKYEFDKCFDILKEME 486
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 116/250 (46%), Gaps = 8/250 (3%)
Query: 79 FQDALQIMKWMESRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSL--PPLAMNKYTYGA 136
+A ++ K M+ P Y Y++ +D +C+ + A + F + A N T+
Sbjct: 271 ISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNN 330
Query: 137 LLNCYCKELMVNKALAHFDKMNELGY-VTFLSFNNLIGMYMRLGQPLKVHELVHDMKERN 195
L+ + K K L +++M +LG +++N LI + R ++++ M ++
Sbjct: 331 LMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKK 390
Query: 196 IPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKA 255
++A ++ D+ G ++Y M +E + + + +TY+ L ++V +K +
Sbjct: 391 CEVNASTFNTIFRYIEKKRDVNGAHRMYSKM-MEAKCEPNTVTYNILMRMFVGSKSTDMV 449
Query: 256 ELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSL---KSVTPVLNVSYLCMI 312
M ++++ Y L++++ G G+ Y L+ + K +TP L++ Y ++
Sbjct: 450 LKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSL-YEMVL 508
Query: 313 SALKRLNDME 322
+ L+R ++
Sbjct: 509 AQLRRAGQLK 518
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/418 (19%), Positives = 173/418 (41%), Gaps = 15/418 (3%)
Query: 34 YQRLSELEKTGMSASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWMESRV 93
Y R ++++ ++ + +D Y E V +MS+ L F A ++ M R
Sbjct: 86 YGRKGKVQEA-VNVFERMDFYDCEPTVFSYNAIMSV---LVDSGYFDQAHKVYMRMRDRG 141
Query: 94 ESPLDYNYAVHLDLVCKNEGVVAAENYFNSLPPLA--MNKYTYGALLNCYCKELMVNKAL 151
+P Y++ + + CK AA N++ MN Y ++ + +E +
Sbjct: 142 ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGY 201
Query: 152 AHFDKMNELGYVTFLS-FNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNSY 210
F KM G LS FN L+ + + G + +L+ + +R + + F Y+ ++
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 211 AALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKL-EQAVKPR 269
+L G ++ + +E K D +TY+NL K +F++AE+ L K+ + ++P
Sbjct: 262 CQRGELDGAVRMVGCL-IEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPD 320
Query: 270 KREAYHCLLSLYAGTGNLEKVYSL-WDSLKSVTPVLNVSYLCMISALKRLNDMEGLIRCF 328
Y+ L++ Y G ++ + D++ + +Y +I L + + F
Sbjct: 321 SY-TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALF 379
Query: 329 KEWESRYGHCDLRLISAVISAYLSHDMSEEAALVFKDAIKKSKGPFFKIREMFMIFFLEK 388
E + ++ L + +I + M EAA + + +K P + F I
Sbjct: 380 NEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEV---QTFNILVNGL 436
Query: 389 CQLDGAVSHLEAALSEVVGDEWRPTPRVLRAFVKYYKEETDLDGVDELSKILMTHNFD 446
C++ G VS + + ++ + P + Y + ++ E+ +++ + D
Sbjct: 437 CKM-GCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVD 493
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 137/324 (42%), Gaps = 26/324 (8%)
Query: 3 LVRIISGGRRLLRHLCTAVTEADRPAKGRSLY-----------QRLSELEKTGMSASQTL 51
L+R +S G LL L + + + + +K L+ R S G+ + L
Sbjct: 462 LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL 521
Query: 52 DQ-------YISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWMESRVESPLDYNYAVH 104
D+ + G V + +++ ++ +A + M R P +Y Y++
Sbjct: 522 DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL 581
Query: 105 LDLVCKNEGVVAAENYFNSLPPLAM--NKYTYGALLNCYCKELMVNKALAHFDKM-NELG 161
+ + V A +++ M + YTY +++ CK + FD+M ++
Sbjct: 582 ICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNV 641
Query: 162 YVTFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEK 221
+ +N+LI Y R G+ EL DMK + I ++ Y + + + ++ + +
Sbjct: 642 QPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKL 701
Query: 222 IYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKL-EQAVKPRKREAYHCLLSL 280
++E M++E + + Y+ L Y K Q K E +LR++ + V P K Y ++
Sbjct: 702 LFEEMRME-GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI-TYTVMIGG 759
Query: 281 YAGTGNLEKVYSLWDSL--KSVTP 302
YA GN+ + L + + K + P
Sbjct: 760 YARDGNVTEASRLLNEMREKGIVP 783
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 137/324 (42%), Gaps = 26/324 (8%)
Query: 3 LVRIISGGRRLLRHLCTAVTEADRPAKGRSLY-----------QRLSELEKTGMSASQTL 51
L+R +S G LL L + + + + +K L+ R S G+ + L
Sbjct: 462 LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL 521
Query: 52 DQ-------YISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWMESRVESPLDYNYAVH 104
D+ + G V + +++ ++ +A + M R P +Y Y++
Sbjct: 522 DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL 581
Query: 105 LDLVCKNEGVVAAENYFNSLPPLAM--NKYTYGALLNCYCKELMVNKALAHFDKM-NELG 161
+ + V A +++ M + YTY +++ CK + FD+M ++
Sbjct: 582 ICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNV 641
Query: 162 YVTFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEK 221
+ +N+LI Y R G+ EL DMK + I ++ Y + + + ++ + +
Sbjct: 642 QPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKL 701
Query: 222 IYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKL-EQAVKPRKREAYHCLLSL 280
++E M++E + + Y+ L Y K Q K E +LR++ + V P K Y ++
Sbjct: 702 LFEEMRME-GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI-TYTVMIGG 759
Query: 281 YAGTGNLEKVYSLWDSL--KSVTP 302
YA GN+ + L + + K + P
Sbjct: 760 YARDGNVTEASRLLNEMREKGIVP 783
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 91/199 (45%), Gaps = 4/199 (2%)
Query: 69 IVKELRKYRRFQDALQIMKWMESRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSLPPLA 128
+V L K AL ++K ME P Y +D +C + V A N F +
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286
Query: 129 M--NKYTYGALLNCYCKELMVNKALAHFDKMNELGY-VTFLSFNNLIGMYMRLGQPLKVH 185
+ N TY +L+ C C + A M E ++F+ LI +++ G+ ++
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 346
Query: 186 ELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAI 245
+L +M +R+I F Y + +N + + L + ++ELM + + + +TY+ L
Sbjct: 347 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM-ISKDCFPNVVTYNTLIKG 405
Query: 246 YVKAKQFEKAELMLRKLEQ 264
+ KAK+ ++ + R++ Q
Sbjct: 406 FCKAKRVDEGMELFREMSQ 424
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 107/250 (42%), Gaps = 5/250 (2%)
Query: 127 LAMNKYTYGALLNCYCKELMVNKALAHFDKMNELGY-VTFLSFNNLIGMYMRLGQPLKVH 185
++ N YTY L+NC+C+ ++ ALA KM +LGY ++ N+L+ + +
Sbjct: 112 ISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV 171
Query: 186 ELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAI 245
LV M E +F ++ ++ N + + M ++ + D +TY +
Sbjct: 172 SLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVK-GCQPDLVTYGIVVNG 230
Query: 246 YVKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSL--KSVTPV 303
K + A +L+K+EQ Y+ ++ N+ +L+ + K + P
Sbjct: 231 LCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPN 290
Query: 304 LNVSYLCMISALKRLNDMEGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALVF 363
+ V+Y +I L R + R + ++ SA+I A++ EA ++
Sbjct: 291 V-VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 349
Query: 364 KDAIKKSKGP 373
+ IK+S P
Sbjct: 350 DEMIKRSIDP 359
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 105/222 (47%), Gaps = 6/222 (2%)
Query: 47 ASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWMES-RVESPLDYNYAVHL 105
A +D+ + G ++V L K AL ++ ME+ ++E+ + Y+ +
Sbjct: 202 AVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI-YSTVI 260
Query: 106 DLVCKNEGVVAAENYFNSLPPLAM--NKYTYGALLNCYCKELMVNKALAHFDKMNELGY- 162
D +CK A N F + + N TY +L++C C + A M E
Sbjct: 261 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN 320
Query: 163 VTFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKI 222
++F+ LI +++ G+ +K +L +M +R+I + F Y + +N + L+ L +++
Sbjct: 321 PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQM 380
Query: 223 YELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQ 264
ELM + + + +TY+ L + KAK+ +K + R++ Q
Sbjct: 381 LELM-IRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQ 421
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 94/221 (42%), Gaps = 3/221 (1%)
Query: 47 ASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWMESRVESPLDYNYAVHLD 106
A +DQ + G ++V L ++ + +A+ +++ M + P Y ++
Sbjct: 164 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 223
Query: 107 LVCKNEGVVAAENYFNSL--PPLAMNKYTYGALLNCYCKELMVNKALAHFDKMNELGY-V 163
+CK A N N + + + Y +++ CK ++ A F+KM G
Sbjct: 224 GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 283
Query: 164 TFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIY 223
++N LI G+ L+ DM E+NI ++A ++++ LV EK+Y
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLY 343
Query: 224 ELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQ 264
+ M D + Y+ L + K K+ E+ + R++ Q
Sbjct: 344 DEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQ 384
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 112/263 (42%), Gaps = 8/263 (3%)
Query: 40 LEKTGMSASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWMESRVESPLDY 99
LE + A+ +++ + +G +IV + K + AL ++ ME P
Sbjct: 238 LEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVV 297
Query: 100 NYAVHLDLVCKNEGVVAAENYFNSL--PPLAMNKYTYGALLNCYCKELMVNKALAHFDKM 157
Y+ +D +CK+ A+ F+ + +A N +TY +++ +C + A M
Sbjct: 298 IYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM 357
Query: 158 NELGY-VTFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDL 216
E L+FN LI ++ G+ + +L +M R I Y++ + + N
Sbjct: 358 IEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRF 417
Query: 217 VGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQAVKPRKREAYHC 276
+ +++LM D +T++ + +Y +AK+ ++ +LR++ + Y+
Sbjct: 418 DDAKHMFDLM-----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 472
Query: 277 LLSLYAGTGNLEKVYSLWDSLKS 299
L+ + NL L+ + S
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMIS 495
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 120/285 (42%), Gaps = 9/285 (3%)
Query: 96 PLDYNYAVHLDLVCKNEGVVAAENYFNSL--PPLAMNKYTYGALLNCYCKELMVNKALAH 153
P + Y + + C+ + A N N + AM+ TY +L+ CK M+ +A
Sbjct: 408 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 467
Query: 154 FDKMNELG-YVTFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNSYAA 212
F++M E + + LI + +LG EL MKE+ I + Y+ ++ +
Sbjct: 468 FNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGK 527
Query: 213 LNDLVGVEKIYELMKLEVETKIDWLTYSNLA-AIYVKAKQFEKAELMLRKLEQAVKPRKR 271
+ D+ ++I+ M + E ++YS L A+ K E + + + +KP
Sbjct: 528 VGDIDTAKEIWADM-VSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVM 586
Query: 272 EAYHCLLSLYAGTGNLEKVYSLWDSLKSVTPVLN-VSYLCMISALKRLNDMEGLIRCFKE 330
+ ++ Y +GN S + + S V + +SY +I R +M K+
Sbjct: 587 -ICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKK 645
Query: 331 WESRYGHC--DLRLISAVISAYLSHDMSEEAALVFKDAIKKSKGP 373
E G D+ ++++ + + +EA +V + I++ P
Sbjct: 646 MEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNP 690
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 112/263 (42%), Gaps = 8/263 (3%)
Query: 40 LEKTGMSASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWMESRVESPLDY 99
LE + A+ +++ + +G +IV + K + AL ++ ME P
Sbjct: 238 LEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVV 297
Query: 100 NYAVHLDLVCKNEGVVAAENYFNSL--PPLAMNKYTYGALLNCYCKELMVNKALAHFDKM 157
Y+ +D +CK+ A+ F+ + +A N +TY +++ +C + A M
Sbjct: 298 IYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM 357
Query: 158 NELGY-VTFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDL 216
E L+FN LI ++ G+ + +L +M R I Y++ + + N
Sbjct: 358 IEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRF 417
Query: 217 VGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQAVKPRKREAYHC 276
+ +++LM D +T++ + +Y +AK+ ++ +LR++ + Y+
Sbjct: 418 DDAKHMFDLM-----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 472
Query: 277 LLSLYAGTGNLEKVYSLWDSLKS 299
L+ + NL L+ + S
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMIS 495
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/330 (19%), Positives = 144/330 (43%), Gaps = 8/330 (2%)
Query: 47 ASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWMESRVESPLDYNYAVHLD 106
A +DQ + G ++V L ++ + +A+ +++ M + P Y ++
Sbjct: 154 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 213
Query: 107 LVCKNEGVVAAENYFNSL--PPLAMNKYTYGALLNCYCKELMVNKALAHFDKMNELGY-V 163
+CK A N N + + + Y +++ CK V+ AL F +M+ G
Sbjct: 214 GLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP 273
Query: 164 TFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIY 223
++++LI G+ L+ DM ER I + +++ ++++A L+ EK++
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 333
Query: 224 -ELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYA 282
E+++ ++ I +TY++L + + ++A+ + + Y+ L++ +
Sbjct: 334 DEMIQRSIDPNI--VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC 391
Query: 283 GTGNLEKVYSLWDSLKSVTPVLN-VSYLCMISALKRLNDMEGLIRCFKEWESRYGHCDLR 341
+ L+ + V N V+Y +I + +D + FK+ S H ++
Sbjct: 392 KAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIM 451
Query: 342 LISAVISAYLSHDMSEEAALVFKDAIKKSK 371
+ ++ + E+A +VF + ++KSK
Sbjct: 452 TYNTLLDGLCKNGKLEKAMVVF-EYLQKSK 480
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 85/170 (50%), Gaps = 2/170 (1%)
Query: 130 NKYTYGALLNCYCKELMVNKALAHFDKMNELGY-VTFLSFNNLIGMYMRLGQPLKVHELV 188
+ TY +N YC+ NKA FD+M + G+ ++++N++ MY + + L+
Sbjct: 387 GQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLM 446
Query: 189 HDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVK 248
MK+R + + Y++ ++ + DL EKI++ MK + D ++Y+++ + Y +
Sbjct: 447 AKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMK-RAKVLPDKVSYTSMISAYNR 505
Query: 249 AKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLK 298
+K+ E+ + ++ R ++ +++ T ++++ L +K
Sbjct: 506 SKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMK 555
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 14/146 (9%)
Query: 117 AENYFNSLPPLAMNKYTYGALLNCYCKELMVNKALAHFDKMNELGYVTFLSFNNLIGMYM 176
A F+ +P + ++Y +L+CY + + KA + FD+M + S+N +I Y
Sbjct: 112 AHQLFDEIP--EPDTFSYNIMLSCYVRNVNFEKAQSFFDRM---PFKDAASWNTMITGYA 166
Query: 177 RLGQPLKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDW 236
R G+ K EL + M E+N +++A ++ Y DL EK K+ +
Sbjct: 167 RRGEMEKARELFYSMMEKN----EVSWNAMISGYIECGDL---EKASHFFKVAPVRGV-- 217
Query: 237 LTYSNLAAIYVKAKQFEKAELMLRKL 262
+ ++ + Y+KAK+ E AE M + +
Sbjct: 218 VAWTAMITGYMKAKKVELAEAMFKDM 243
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/301 (20%), Positives = 135/301 (44%), Gaps = 18/301 (5%)
Query: 80 QDALQIMKWMESRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSLP-PLAMNKYTYGALL 138
+ A++++ M P +Y + LD +CK+ V A F + +N + +LL
Sbjct: 200 KKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLL 259
Query: 139 NCYCKELMVNKALAHFDKMNELGY-VTFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIP 197
+C+ + +A +MNE G+ + + NL+ Y G+ ++L+ DM+ R
Sbjct: 260 YGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFE 319
Query: 198 MSAFAYHAWMNSYAALNDLVGVEKIYELMKLEV-----ETKIDWLTYSNLAAIYVKAKQF 252
+A Y + + L V+++ E MK+ V E + D +TY+ L + + K +
Sbjct: 320 PNANCYTVLIQA------LCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKI 373
Query: 253 EKAELMLRKL-EQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKSVT--PVLNVSYL 309
+K ++L + ++ + P + H +++ + + E+ L + ++ + P + + Y
Sbjct: 374 DKCYIVLDDMIKKGLMPSELTYMHIMVA-HEKKESFEECLELMEKMRQIEYHPDIGI-YN 431
Query: 310 CMISALKRLNDMEGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALVFKDAIKK 369
+I +L +++ +R + E E + +I+ S EA+ FK+ + +
Sbjct: 432 VVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTR 491
Query: 370 S 370
Sbjct: 492 G 492
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 111/266 (41%), Gaps = 7/266 (2%)
Query: 127 LAMNKYTYGALLNCYCKELMVNKALAHFDKMNELGY-VTFLSFNNLIGMYMRLGQPLKVH 185
+N Y + L+N +CKE ++ A FD++ + T +SFN LI Y ++G +
Sbjct: 236 FPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGF 295
Query: 186 ELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAI 245
L H M++ F Y A +N+ N + G +++ M D + ++ L
Sbjct: 296 RLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVI-FTTLIHG 354
Query: 246 YVKAKQFE-KAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSL--KSVTP 302
+ + + + E + L + ++P Y+ L++ + G+L ++ D + + + P
Sbjct: 355 HSRNGEIDLMKESYQKMLSKGLQP-DIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRP 413
Query: 303 VLNVSYLCMISALKRLNDMEGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALV 362
++Y +I R D+E + KE + D SA++ +A
Sbjct: 414 D-KITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERA 472
Query: 363 FKDAIKKSKGPFFKIREMFMIFFLEK 388
++ ++ P M M F +K
Sbjct: 473 LREMLRAGIKPDDVTYTMMMDAFCKK 498
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 111/248 (44%), Gaps = 6/248 (2%)
Query: 130 NKYTYGALLNCYCKELMVNKALAHFDKMNELGY-VTFLSFNNLIGMYMRLGQPLKVHELV 188
N TY AL++ Y + +A+ F +M + G +S L+ R + + V ++
Sbjct: 424 NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVL 483
Query: 189 HDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVK 248
+ R I ++ AY++ + SY +L +Y+ M+ + + K D +T++ L + +
Sbjct: 484 SAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMR-KKKVKADSVTFTILISGSCR 542
Query: 249 AKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLK--SVTPVLNV 306
++ +A L+++E P +E Y +L Y+ G + + S+++ +K P + +
Sbjct: 543 MSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDV-I 601
Query: 307 SYLCMISALKRLNDMEGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALVFKDA 366
+Y M+ A F E E+ D SA++ A+ + V D
Sbjct: 602 AYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAF-NKGGQPSNVFVLMDL 660
Query: 367 IKKSKGPF 374
+++ + PF
Sbjct: 661 MREKEIPF 668
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 147/348 (42%), Gaps = 17/348 (4%)
Query: 30 GRSLYQRLSELEKTGMSASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWM 89
G L R+SE A + +D+ + G + ++V L + +A+ ++ M
Sbjct: 167 GLCLEGRVSE-------ALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM 219
Query: 90 ESRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSLPP--LAMNKYTYGALLNCYCKELMV 147
P Y L+++CK+ A + + ++ Y +++ CK +
Sbjct: 220 VEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSL 279
Query: 148 NKALAHFDKMNELGYVT-FLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAW 206
+ A F++M G T +++N LIG + G+ +L+ DM +R I + +
Sbjct: 280 DNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL 339
Query: 207 MNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLR-KLEQA 265
++S+ L E++++ M + D +TY++L + K +KA M+ + +
Sbjct: 340 IDSFVKEGKLREAEELHKEM-IHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 266 VKPRKREAYHCLLSLYAGTGNLEKVYSLWD--SLKSVTPVLNVSYLCMISALKRLNDMEG 323
P R ++ L++ Y ++ L+ SL+ V V+Y +I L +
Sbjct: 399 CDPNIR-TFNILINGYCKANRIDDGLELFRKMSLRGVVAD-TVTYNTLIQGFCELGKLNV 456
Query: 324 LIRCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALVFKDAIKKSK 371
F+E SR ++ ++ + SE+A +F + I+KSK
Sbjct: 457 AKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF-EKIEKSK 503
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 111/248 (44%), Gaps = 6/248 (2%)
Query: 130 NKYTYGALLNCYCKELMVNKALAHFDKMNELGY-VTFLSFNNLIGMYMRLGQPLKVHELV 188
N TY AL++ Y + +A+ F +M + G +S L+ R + + V ++
Sbjct: 292 NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVL 351
Query: 189 HDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVK 248
+ R I ++ AY++ + SY +L +Y+ M+ + + K D +T++ L + +
Sbjct: 352 SAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMR-KKKVKADSVTFTILISGSCR 410
Query: 249 AKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLK--SVTPVLNV 306
++ +A L+++E P +E Y +L Y+ G + + S+++ +K P + +
Sbjct: 411 MSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDV-I 469
Query: 307 SYLCMISALKRLNDMEGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALVFKDA 366
+Y M+ A F E E+ D SA++ A+ + V D
Sbjct: 470 AYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAF-NKGGQPSNVFVLMDL 528
Query: 367 IKKSKGPF 374
+++ + PF
Sbjct: 529 MREKEIPF 536
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 105/234 (44%), Gaps = 14/234 (5%)
Query: 122 NSLPPLAMNKYTYGALLNCYCKELMVNKALAHFDKMNELGY----VTFLSFNNLIGMYMR 177
+S+ P +++TY L++ YCK V KAL ++M+E G+ + S N +G R
Sbjct: 403 DSVSP---SEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKR 459
Query: 178 LGQPLKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWL 237
+EL ++KE +S+ Y + + L ++ MK + + D
Sbjct: 460 YEA---ANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQ-GSGPDVY 515
Query: 238 TYSNLAAIYVKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSL 297
Y+ L + VKA +A +LRK+E+ +++ +L+ +A TG + +++++
Sbjct: 516 AYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETI 575
Query: 298 K--SVTPVLNVSYLCMISALKRLNDMEGLIRCFKEWESRYGHCDLRLISAVISA 349
K + P V+Y ++ E R +E + + D S+++ A
Sbjct: 576 KHSGIKPD-GVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDA 628
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 5/166 (3%)
Query: 130 NKYTYGALLNCYCKELMVNKALAHFDKMNELGYV-TFLSFNNLIGMYMRLGQPLKVHELV 188
N TY AL+N +CK M+ +AL F + G V T +N LI Y +LG+ L
Sbjct: 365 NLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALK 424
Query: 189 HDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVK 248
+M+ I Y+ + ++ +K+++ +L + D +T+ L Y +
Sbjct: 425 EEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFD--QLTSKGLPDLVTFHILMEGYCR 482
Query: 249 AKQFEKAELMLRKLEQ-AVKPRKREAYHCLLSLYAGTGNLEKVYSL 293
+ KA ++L+++ + +KPR Y+ ++ Y GNL+ ++
Sbjct: 483 KGESRKAAMLLKEMSKMGLKPR-HLTYNIVMKGYCKEGNLKAATNM 527
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 117/278 (42%), Gaps = 31/278 (11%)
Query: 51 LDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWMESRVESPLDYNYAVHLDLVCK 110
+D Y GK+ KE++S +KE D ++ P + +C+
Sbjct: 413 IDGYCRAGKLETAKEVVSRMKE--------DEIK-----------PNVVTVNTIVGGMCR 453
Query: 111 NEGVVAAENYFNSLPPLAM--NKYTYGALLNCYCKELMVNKALAHFDKMNELGYVTFLS- 167
+ G+ A +F + + N TY L++ C V KA+ ++KM E G
Sbjct: 454 HHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKI 513
Query: 168 FNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMK 227
+ LI ++ + +V +KE + AY+ + + N+ EK+YE++
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN---AEKVYEMLT 570
Query: 228 -LEVE-TKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTG 285
+E E K D +TY+ L + + K K FE E M+ ++ + Y ++ Y G
Sbjct: 571 DMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVG 630
Query: 286 NLEKVYSLWDSL---KSVTPVLNVSYLCMISALKRLND 320
L++ L+ + V P V Y +I+A +L +
Sbjct: 631 ELDEALKLFKDMGLHSKVNPN-TVIYNILINAFSKLGN 667
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 146/372 (39%), Gaps = 17/372 (4%)
Query: 69 IVKELRKYRRFQDALQIMKWMESR------VESPLDYNYAVHLDLVCKNEGVVAAENYFN 122
++ L K RR +AL++ + M + V ++ +D +CK + AE
Sbjct: 335 LINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLV 394
Query: 123 SLP---PLAMNKYTYGALLNCYCKELMVNKALAHFDKMNELGY-VTFLSFNNLIGMYMRL 178
+ N TY L++ YC+ + A +M E ++ N ++G R
Sbjct: 395 RMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRH 454
Query: 179 GQPLKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLT 238
DM++ + + Y +++ +++++ YE M LE D
Sbjct: 455 HGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKM-LEAGCSPDAKI 513
Query: 239 YSNLAAIYVKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYS-LWDSL 297
Y L + + ++ A ++ KL++ AY+ L+ L+ N EKVY L D
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDME 573
Query: 298 KSVTPVLNVSYLCMISALKRLNDMEGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSE 357
K +++Y +IS + D E + R ++ + AVI AY S +
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELD 633
Query: 358 EAALVFKDAIKKSK-GPFFKIREMFMIFFLEKCQLDGAVSHLEAALSEVVGDEWRPTPRV 416
EA +FKD SK P I + + F + A+S E ++V RP
Sbjct: 634 EALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMV----RPNVET 689
Query: 417 LRAFVKYYKEET 428
A K E+T
Sbjct: 690 YNALFKCLNEKT 701
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 117/278 (42%), Gaps = 31/278 (11%)
Query: 51 LDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWMESRVESPLDYNYAVHLDLVCK 110
+D Y GK+ KE++S +KE D ++ P + +C+
Sbjct: 413 IDGYCRAGKLETAKEVVSRMKE--------DEIK-----------PNVVTVNTIVGGMCR 453
Query: 111 NEGVVAAENYFNSLPPLAM--NKYTYGALLNCYCKELMVNKALAHFDKMNELGYVTFLS- 167
+ G+ A +F + + N TY L++ C V KA+ ++KM E G
Sbjct: 454 HHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKI 513
Query: 168 FNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMK 227
+ LI ++ + +V +KE + AY+ + + N+ EK+YE++
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN---TEKVYEMLT 570
Query: 228 -LEVE-TKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTG 285
+E E K D +TY+ L + + K K FE E M+ ++ + Y ++ Y G
Sbjct: 571 DMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVG 630
Query: 286 NLEKVYSLWDSL---KSVTPVLNVSYLCMISALKRLND 320
L++ L+ + V P V Y +I+A +L +
Sbjct: 631 ELDEALKLFKDMGLHSKVNPN-TVIYNILINAFSKLGN 667
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 147/372 (39%), Gaps = 17/372 (4%)
Query: 69 IVKELRKYRRFQDALQIMKWMESR------VESPLDYNYAVHLDLVCKNEGVVAAENYFN 122
++ L K RR +AL++ + M + V ++ +D +CK + AE
Sbjct: 335 LINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLV 394
Query: 123 SLP---PLAMNKYTYGALLNCYCKELMVNKALAHFDKMNELGY-VTFLSFNNLIGMYMRL 178
+ A N TY L++ YC+ + A +M E ++ N ++G R
Sbjct: 395 RMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRH 454
Query: 179 GQPLKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLT 238
DM++ + + Y +++ +++++ YE M LE D
Sbjct: 455 HGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKM-LEAGCSPDAKI 513
Query: 239 YSNLAAIYVKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYS-LWDSL 297
Y L + + ++ A ++ KL++ AY+ L+ L+ N EKVY L D
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDME 573
Query: 298 KSVTPVLNVSYLCMISALKRLNDMEGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSE 357
K +++Y +IS + D E + R ++ + AVI AY S +
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELD 633
Query: 358 EAALVFKDAIKKSK-GPFFKIREMFMIFFLEKCQLDGAVSHLEAALSEVVGDEWRPTPRV 416
EA +FKD SK P I + + F + A+S E ++V RP
Sbjct: 634 EALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMV----RPNVET 689
Query: 417 LRAFVKYYKEET 428
A K E+T
Sbjct: 690 YNALFKCLNEKT 701
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 116/276 (42%), Gaps = 10/276 (3%)
Query: 47 ASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWMESRVESPLDYNYAVHLD 106
A + D+ +G A S+V L R+ DA ++M+ M R P + +D
Sbjct: 193 AVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVID 252
Query: 107 LVCKNEGVVAAENYFNSLPPLAMNK--YTYGALLNCYCKELMVNKALAHFDKMNELGYVT 164
+ K A + + ++ +TY +L+N C V++A D M G +
Sbjct: 253 VFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP 312
Query: 165 -FLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIY 223
+++N LI + + + + +L +M +R + Y+ + Y ++I+
Sbjct: 313 DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF 372
Query: 224 ELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAG 283
M +++ + TYS L + EKA ++ ++++ Y+ ++
Sbjct: 373 SRM----DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCK 428
Query: 284 TGNLEKVYSLWDSL--KSVTPVLNVSYLCMISALKR 317
GN+E + L+ SL K + P + VSY MIS R
Sbjct: 429 IGNVEDAWDLFRSLSCKGLKPDV-VSYTTMISGFCR 463
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/337 (20%), Positives = 136/337 (40%), Gaps = 9/337 (2%)
Query: 68 SIVKELRKYRRFQDALQIMKWMESRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSLPPL 127
+I++ L + + A++++ M R P Y + ++ C++ GV A + +
Sbjct: 209 TILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDR 268
Query: 128 AMNK--YTYGALLNCYCKELMVNKALAHFDKMNELGYVTFLSFNNLIGMYM-RLGQPLKV 184
TY L+N CKE +++A+ + M G + +N+I M G+ +
Sbjct: 269 GCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDA 328
Query: 185 HELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAA 244
+L+ DM + S ++ +N L I E M + + + L+Y+ L
Sbjct: 329 EKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP-QHGCQPNSLSYNPLLH 387
Query: 245 IYVKAKQFEKA-ELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSL--KSVT 301
+ K K+ ++A E + R + + P Y+ +L+ G +E + + L K +
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCYP-DIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 302 PVLNVSYLCMISALKRLNDMEGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAAL 361
PVL ++Y +I L + I+ E ++ D S+++ +EA
Sbjct: 447 PVL-ITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIK 505
Query: 362 VFKDAIKKSKGPFFKIREMFMIFFLEKCQLDGAVSHL 398
F + + P M+ + Q D A+ L
Sbjct: 506 FFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFL 542
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 98/221 (44%), Gaps = 12/221 (5%)
Query: 108 VCKNEGVVAAENYFNSLPPLAM--NKYTYGALLNCYCKELMVNKALAHFDKMNELGYVTF 165
+C++ G+ A +F + + N TY L++ C V KA+ ++KM E G
Sbjct: 451 MCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPD 510
Query: 166 LS-FNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYE 224
+ LI ++ + +V +KE + AY+ + + N+ EK+YE
Sbjct: 511 AKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN---AEKVYE 567
Query: 225 LMK-LEVE-TKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYA 282
++ +E E K D +TY+ L + + K K FE E M+ ++ + Y ++ Y
Sbjct: 568 MLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYC 627
Query: 283 GTGNLEKVYSLWDSL---KSVTPVLNVSYLCMISALKRLND 320
G L++ L+ + V P V Y +I+A +L +
Sbjct: 628 SVGELDEALKLFKDMGLHSKVNPN-TVIYNILINAFSKLGN 667
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 146/372 (39%), Gaps = 17/372 (4%)
Query: 69 IVKELRKYRRFQDALQIMKWMESR------VESPLDYNYAVHLDLVCKNEGVVAAENYFN 122
++ L K RR +AL++ + M + V ++ +D +CK + AE
Sbjct: 335 LINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLV 394
Query: 123 SLP---PLAMNKYTYGALLNCYCKELMVNKALAHFDKMNELGY-VTFLSFNNLIGMYMRL 178
+ N TY L++ YC+ + A +M E ++ N ++G R
Sbjct: 395 RMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRH 454
Query: 179 GQPLKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLT 238
DM++ + + Y +++ +++++ YE M LE D
Sbjct: 455 HGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKM-LEAGCSPDAKI 513
Query: 239 YSNLAAIYVKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYS-LWDSL 297
Y L + + ++ A ++ KL++ AY+ L+ L+ N EKVY L D
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDME 573
Query: 298 KSVTPVLNVSYLCMISALKRLNDMEGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSE 357
K +++Y +IS + D E + R ++ + AVI AY S +
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELD 633
Query: 358 EAALVFKDAIKKSK-GPFFKIREMFMIFFLEKCQLDGAVSHLEAALSEVVGDEWRPTPRV 416
EA +FKD SK P I + + F + A+S E ++V RP
Sbjct: 634 EALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMV----RPNVET 689
Query: 417 LRAFVKYYKEET 428
A K E+T
Sbjct: 690 YNALFKCLNEKT 701
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/237 (19%), Positives = 101/237 (42%), Gaps = 3/237 (1%)
Query: 130 NKYTYGALLNCYCKELMVNKALAHFDKMNELGY-VTFLSFNNLIGMYMRLGQPLKVHELV 188
N TY L+ C CK +N A+ F++M G +++N L+ +G+ L+
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL 246
Query: 189 HDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVK 248
DM +R I + + A ++++ + L+ +++Y +M +++ D TY +L
Sbjct: 247 RDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVM-IQMSVYPDVFTYGSLINGLCM 305
Query: 249 AKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKSVTPVLN-VS 307
++A M +E+ Y L+ + + +E ++ + V N ++
Sbjct: 306 YGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT 365
Query: 308 YLCMISALKRLNDMEGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALVFK 364
Y +I + + F + SR D+R + ++ + E+A ++F+
Sbjct: 366 YTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFE 422
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 117/272 (43%), Gaps = 13/272 (4%)
Query: 129 MNKYTYGALLNCYCKELMVNKALAHFDKMNELGYV-TFLSFNNLIGMYMRLGQPLKVHEL 187
+N T+ ++ Y + V++A+ F+ M + ++FN L+ + K E+
Sbjct: 166 LNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEV 225
Query: 188 VHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYV 247
+M++R P S Y + + +L +++ M ++ D +TYS + I
Sbjct: 226 FENMRDRFTPDSK-TYSILLEGWGKEPNLPKAREVFREM-IDAGCHPDIVTYSIMVDILC 283
Query: 248 KAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLW-----DSLKSVTP 302
KA + ++A ++R ++ ++ Y L+ Y LE+ + +K+
Sbjct: 284 KAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVA 343
Query: 303 VLNVSYLCMISALKRLNDMEGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALV 362
V N +I A + N M+ + R KE +S+ + + + ++ + +EA V
Sbjct: 344 VFN----SLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDV 399
Query: 363 FKDAIKKSKGPFFKIREMFMIFFLEKCQLDGA 394
F+ IK + P M + F EK +++ A
Sbjct: 400 FRKMIKVCE-PDADTYTMVIKMFCEKKEMETA 430
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 99/205 (48%), Gaps = 13/205 (6%)
Query: 129 MNKYTYGALLNCYCKELMVNKALAHFDKMNE----LGYVTFLSFNNLIGMYMRLGQPLKV 184
++ TY ++ K ++ A F +M E + F S + +G RL +KV
Sbjct: 311 LDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKV 370
Query: 185 HELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAA 244
+ + R SA + + ++SYA L ++++ MK + + ++ Y+ +
Sbjct: 371 YMEMQGFGHRP---SATMFVSLIDSYAKAGKLDTALRLWDEMK-KSGFRPNFGLYTMIIE 426
Query: 245 IYVKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKS--VTP 302
+ K+ + E A + + +E+A Y CLL ++AG+G ++ +++S+ + + P
Sbjct: 427 SHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRP 486
Query: 303 VLNVSYLCMISAL--KRLNDMEGLI 325
L+ SY+ +++ L KRL D+ G I
Sbjct: 487 GLS-SYISLLTLLANKRLVDVAGKI 510
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 114/277 (41%), Gaps = 13/277 (4%)
Query: 66 LMSIVKELRKYRRFQDALQIMKWMESRV-ESPLDYNYAVHLDLVCKNEGVVAAENYF--- 121
++ I + L+ + AL + +W + + P D Y V D + + V ++ F
Sbjct: 172 MVHITQSLKIVKEVDAALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEM 231
Query: 122 ----NSLPPLAMNKYTYGALLNCYCKELMVNKALAHFDKMNELG-YVTFLSFNNLIGMYM 176
+S L+ N Y ++ K + A F K E G + ++NNL+ +++
Sbjct: 232 VQDSSSHGDLSFN--AYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFL 289
Query: 177 RLGQPLKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDW 236
G P K E+ M++ + + Y + S A L K+++ MK E + + +
Sbjct: 290 NKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMK-ERKLRPSF 348
Query: 237 LTYSNLAAIYVKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDS 296
+S+L KA + + + + +++ + L+ YA G L+ LWD
Sbjct: 349 SVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDE 408
Query: 297 LKSVTPVLNVS-YLCMISALKRLNDMEGLIRCFKEWE 332
+K N Y +I + + +E + FK+ E
Sbjct: 409 MKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDME 445
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/376 (20%), Positives = 144/376 (38%), Gaps = 46/376 (12%)
Query: 69 IVKELRKYRRFQDALQIMKWMESRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSL--PP 126
++K L R +AL ++K ME P + Y V +D +C A +
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 127 LAMNKYTYGALLNCYCKELMVNKALAHFDKM--NELGYVTFLSFNNLIGMYMRLGQPLKV 184
L N TY AL+N YCK M+ A+ + M +L T ++N LI Y + K
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNT-RTYNELIKGYCK-SNVHKA 446
Query: 185 HELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAA 244
+++ M ER + Y++ ++ + ++ LM W TY+++
Sbjct: 447 MGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQW-TYTSMID 505
Query: 245 IYVKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKSVTPVL 304
K+K+ E+A + LEQ Y L+ Y G +++ + + + +
Sbjct: 506 SLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM------- 558
Query: 305 NVSYLCMISALKRLNDMEGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALVFK 364
+S C+ ++L +A+I + +EA L+ +
Sbjct: 559 -LSKNCLPNSLT--------------------------FNALIHGLCADGKLKEATLLEE 591
Query: 365 DAIKKSKGPFFKIREMFMIFFLEKCQLDGAVSHLEAALSEVVGDEWRPTPRVLRAFVKYY 424
+K P + + L+ DG H + +++ +P F++ Y
Sbjct: 592 KMVKIGLQPTVSTDTILIHRLLK----DGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTY 647
Query: 425 -KEETDLDGVDELSKI 439
+E LD D ++K+
Sbjct: 648 CREGRLLDAEDMMAKM 663
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/176 (18%), Positives = 81/176 (46%), Gaps = 6/176 (3%)
Query: 95 SPLDYNYAVHLDLVCKNEGVVAAENYFNSLPPLAM--NKYTYGALLNCYCKELMVNKALA 152
+P Y + + + +C + V AA F+ +P N++T+G L+ YCK + +K L
Sbjct: 144 APQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLE 203
Query: 153 HFDKMNELGYV-TFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNSYA 211
+ M G + + +N ++ + R G+ ++V M+E + +++ +++
Sbjct: 204 LLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALC 263
Query: 212 ALNDLVGVEKIYELMKLEVE---TKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQ 264
++ +I+ M+L+ + + +TY+ + + K E A+ + + +
Sbjct: 264 KEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRE 319
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 102/238 (42%), Gaps = 21/238 (8%)
Query: 35 QRLSELEKTGMSASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWMESRVE 94
QR SE + L Q +G ++ +++ L K RR ++A + M+ R
Sbjct: 404 QRFSE-------GDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGI 456
Query: 95 SP--LDYN-----YAVHLDLVCKNEGVVAAENYFNSLPPLAMNKYTYGALLNCYCKELMV 147
SP + +N Y+V D V K GV+ P + T+ ++NC C+ +
Sbjct: 457 SPNLVTFNTFLSGYSVRGD-VKKVHGVLEKLLVHGFKPDV----ITFSLIINCLCRAKEI 511
Query: 148 NKALAHFDKMNELGY-VTFLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAW 206
A F +M E G +++N LI G + +L MKE + +AY+A
Sbjct: 512 KDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNAT 571
Query: 207 MNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQ 264
+ S+ + + E++ + M L + K D TYS L ++ + +A M +E+
Sbjct: 572 IQSFCKMRKVKKAEELLKTM-LRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIER 628
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 112/246 (45%), Gaps = 11/246 (4%)
Query: 130 NKYTYGALLNCYCKELMVNKALAHFDKMNELG-YVTFLSFNNLIGMYMRLGQPLKVHELV 188
N +Y LL+ Y + +AL+ F +M E+ + + N +I +Y +L + L
Sbjct: 294 NTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLF 353
Query: 189 HDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELM-KLEVETKIDWLTYSNLAAIYV 247
+++ +I + +Y+ + Y ++ LM + ++E + +TY+ + IY
Sbjct: 354 WSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNV--VTYNTMIKIYG 411
Query: 248 KAKQFEKAELMLRKLE-QAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKSV-TPVLN 305
K + EKA ++++++ + ++P Y ++S++ G L++ +L+ L+S +
Sbjct: 412 KTMEHEKATNLVQEMQSRGIEPNAI-TYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQ 470
Query: 306 VSYLCMISALKRLNDMEGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAALVFKD 365
V Y MI A +R+ M R E + D I+ +EEA VF+
Sbjct: 471 VLYQTMIVAYERVGLMGHAKRLLHELKL----PDNIPRETAITILAKAGRTEEATWVFRQ 526
Query: 366 AIKKSK 371
A + +
Sbjct: 527 AFESGE 532
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/350 (19%), Positives = 137/350 (39%), Gaps = 49/350 (14%)
Query: 68 SIVKELRKYRRFQDALQIMKWMESRVESPLDYNYAVHLDLVCKNEGVVAAENYF-----N 122
S++ K R D + + M+ P Y ++ CK + ++ N
Sbjct: 302 SMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGN 361
Query: 123 SLPPLAMNKYTYGALLNCYCKELMVNKALAHFDKMNELGYV-TFLSFNNLIGMYMRLGQP 181
L P N +Y L++ +CKE M+ +A+ + M +G V ++ +LI ++G
Sbjct: 362 GLKP---NVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNL 418
Query: 182 LKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWL-TYS 240
L ++M + + + Y A ++ + E+++ K++ I L +Y+
Sbjct: 419 SDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFG--KMDTAGVIPNLASYN 476
Query: 241 NLAAIYVKAKQFEKAELMLRKLE-QAVKP---------------RKREA----------- 273
L +VKAK ++A +L +L+ + +KP K EA
Sbjct: 477 ALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKEC 536
Query: 274 --------YHCLLSLYAGTGNLEKVYSLWDSLKSVTPVLNVSYLC-MISALKRLNDMEGL 324
Y L+ Y +GN + L D +K + + V C +I L + +
Sbjct: 537 GIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKA 596
Query: 325 IRCFKEWESRYG-HCDLRLISAVISAYLSHDMSEEAALVFKDAIKKSKGP 373
+ F + +G + + +A+I + E A +F+ ++K P
Sbjct: 597 VDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVP 646
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 134/300 (44%), Gaps = 17/300 (5%)
Query: 31 RSLYQRLSELEKTGMSASQTLDQYISEGKVAGKKELMSIVKELRKYRRFQDALQIMKWME 90
++L LS+ + A Q L++ G V + ++ L K+ R +A +++ M
Sbjct: 256 QTLIHSLSKCNRVN-EALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRML 314
Query: 91 SRVESPLDYNYAVHLDLVCKNEGVVAAENYFNSLPPLAMNKYTYGALLNCYCKELMVNKA 150
R +P D Y ++ +CK V AA++ F +P + + L++ + ++ A
Sbjct: 315 IRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEI--VIFNTLIHGFVTHGRLDDA 372
Query: 151 LAHF-DKMNELGYVT-FLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMN 208
A D + G V ++N+LI Y + G E++HDM+ + + ++Y ++
Sbjct: 373 KAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVD 432
Query: 209 SYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQAVKP 268
+ L + + M + K + + ++ L + + K + +A + R++ P
Sbjct: 433 GFCKLGKIDEAYNVLNEMSAD-GLKPNTVGFNCLISAFCKEHRIPEAVEIFREM-----P 486
Query: 269 RK--REAYHCLLSLYAGTGNLEKV-YSLW---DSLKSVTPVLNVSYLCMISALKRLNDME 322
RK + + SL +G ++++ ++LW D + V+Y +I+A R +++
Sbjct: 487 RKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIK 546
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 102/227 (44%), Gaps = 11/227 (4%)
Query: 127 LAMNKYTYGALLNCYCKELMVNKALAHFDKMNELGYVTFLSFNNLIGMYMRLGQPLKVHE 186
L ++Y +G LL+ CK V +A F+ M E F +L+ + R G+ ++ E
Sbjct: 198 LEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKE 257
Query: 187 LVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELM----KLEVETKIDWLTYSNL 242
++ MKE + + ++ YA + Y+LM K E ++ T +
Sbjct: 258 VLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADA---YDLMNDMRKRGFEPNVNCYTVL-I 313
Query: 243 AAIYVKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSL--KSV 300
A+ K+ ++A + ++E+ Y L+S + G ++K YS+ D + K V
Sbjct: 314 QALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGV 373
Query: 301 TPVLNVSYLCMISALKRLNDMEGLIRCFKEWESRYGHCDLRLISAVI 347
P V+Y+ ++ A ++ E + ++ + R H DL + + VI
Sbjct: 374 MPS-QVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVI 419
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 118/285 (41%), Gaps = 37/285 (12%)
Query: 47 ASQTLDQYISEGKVAGKKELMS---IVKELRKYRRFQDALQIMKWMESRVESPLDYNY-A 102
+S+ LD + EG V + + +V+ K ++ ++A +++K ME P Y
Sbjct: 169 SSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNT 228
Query: 103 VHLDLVCKNEGVVAAENYFNSL---PPLAMNKYTYGALLNCYCKELMVNKALAHFDKMNE 159
+ V K E V A + N T G ++ YC+E V L +M E
Sbjct: 229 IATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKE 288
Query: 160 LGY-VTFLSFNNLIGMYMRL--------------------------GQPLKVHELVHDMK 192
+ + FN+LI ++ + Q +KV L MK
Sbjct: 289 MRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTL-MK 347
Query: 193 ERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMKLEVETKIDWLTYSNLAAIYVKAKQF 252
E N+ Y MN++++ + ++++ M ++ K D YS LA YV+AK+
Sbjct: 348 ECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEM-VKAGVKPDAHAYSILAKGYVRAKEP 406
Query: 253 EKAELMLRKLEQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSL 297
+KAE +L L +P + ++S + G+++ +++ +
Sbjct: 407 KKAEELLETLIVESRPNVV-IFTTVISGWCSNGSMDDAMRVFNKM 450
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 111/252 (44%), Gaps = 15/252 (5%)
Query: 130 NKYTYGALLNCYCKELMVNKALAHFDKMNELG-----YVTFLSFNNLIGMYMRLGQPLKV 184
N TY AL+N + +E + KA F+++ E G YV +N L+ Y R G P
Sbjct: 320 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYV----YNALMESYSRAGYPYGA 375
Query: 185 HELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMK-LEVETKIDWLTYSNLA 243
E+ M+ +Y+ +++Y E ++E MK L + + ++ L
Sbjct: 376 AEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMK--SHMLLL 433
Query: 244 AIYVKAKQFEKAELMLRKL-EQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKSVTP 302
+ Y KA+ K E +++++ E V+P + +L+LY G K+ + +++
Sbjct: 434 SAYSKARDVTKCEAIVKEMSENGVEPDTF-VLNSMLNLYGRLGQFTKMEKILAEMENGPC 492
Query: 303 VLNVS-YLCMISALKRLNDMEGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAAL 361
++S Y +I+ + +E + F E + + D+ ++ I AY + +
Sbjct: 493 TADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLE 552
Query: 362 VFKDAIKKSKGP 373
VF++ I P
Sbjct: 553 VFEEMIDSGCAP 564
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 111/252 (44%), Gaps = 15/252 (5%)
Query: 130 NKYTYGALLNCYCKELMVNKALAHFDKMNELG-----YVTFLSFNNLIGMYMRLGQPLKV 184
N TY AL+N + +E + KA F+++ E G YV +N L+ Y R G P
Sbjct: 298 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYV----YNALMESYSRAGYPYGA 353
Query: 185 HELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYELMK-LEVETKIDWLTYSNLA 243
E+ M+ +Y+ +++Y E ++E MK L + + ++ L
Sbjct: 354 AEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMK--SHMLLL 411
Query: 244 AIYVKAKQFEKAELMLRKL-EQAVKPRKREAYHCLLSLYAGTGNLEKVYSLWDSLKSVTP 302
+ Y KA+ K E +++++ E V+P + +L+LY G K+ + +++
Sbjct: 412 SAYSKARDVTKCEAIVKEMSENGVEPDTF-VLNSMLNLYGRLGQFTKMEKILAEMENGPC 470
Query: 303 VLNVS-YLCMISALKRLNDMEGLIRCFKEWESRYGHCDLRLISAVISAYLSHDMSEEAAL 361
++S Y +I+ + +E + F E + + D+ ++ I AY + +
Sbjct: 471 TADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLE 530
Query: 362 VFKDAIKKSKGP 373
VF++ I P
Sbjct: 531 VFEEMIDSGCAP 542
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 5/189 (2%)
Query: 109 CKNEGVVA-AENYFNSLPP--LAMNKYTYGALLNCYCKELMVNKALAHFDKMNELGYVT- 164
C G ++ AE+ F ++ L ++ TY L++ Y K +NK D+M G
Sbjct: 453 CSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPD 512
Query: 165 FLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYE 224
++N LI + G + +E++ ++ R S A+ + ++ D ++
Sbjct: 513 VATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWF 572
Query: 225 LMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGT 284
M ++ K D +T S L Y KA++ EKA ++ KL A Y+ L+ Y
Sbjct: 573 YMA-DLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSV 631
Query: 285 GNLEKVYSL 293
G++EK L
Sbjct: 632 GDIEKACEL 640
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 5/189 (2%)
Query: 109 CKNEGVVA-AENYFNSLPP--LAMNKYTYGALLNCYCKELMVNKALAHFDKMNELGYVT- 164
C G ++ AE+ F ++ L ++ TY L++ Y K +NK D+M G
Sbjct: 453 CSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPD 512
Query: 165 FLSFNNLIGMYMRLGQPLKVHELVHDMKERNIPMSAFAYHAWMNSYAALNDLVGVEKIYE 224
++N LI + G + +E++ ++ R S A+ + ++ D ++
Sbjct: 513 VATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWF 572
Query: 225 LMKLEVETKIDWLTYSNLAAIYVKAKQFEKAELMLRKLEQAVKPRKREAYHCLLSLYAGT 284
M ++ K D +T S L Y KA++ EKA ++ KL A Y+ L+ Y
Sbjct: 573 YMA-DLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSV 631
Query: 285 GNLEKVYSL 293
G++EK L
Sbjct: 632 GDIEKACEL 640