Miyakogusa Predicted Gene
- Lj5g3v1598320.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1598320.1 Non Chatacterized Hit- tr|I1L7N5|I1L7N5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26438
PE,59.45,0,PPR,Pentatricopeptide repeat; PPR_3,Pentatricopeptide
repeat; TPR_7,Tetratricopeptide repeat; PPR: p,gene.g61970.t1.1
(516 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 351 8e-97
AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 319 3e-87
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 2e-70
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 3e-63
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 2e-52
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 6e-49
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 2e-46
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 6e-42
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 7e-40
AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 1e-33
AT1G28020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT3G15590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 92 9e-19
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 92 9e-19
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 92 9e-19
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 79 8e-15
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 5e-14
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 75 9e-14
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT1G43010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 4e-12
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 70 4e-12
AT3G11380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT1G28000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 69 7e-12
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 1e-11
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 68 1e-11
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-11
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 65 1e-10
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 64 3e-10
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 62 1e-09
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 61 2e-09
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 61 2e-09
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 3e-09
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 60 4e-09
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 8e-09
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 58 2e-08
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 6e-08
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 56 7e-08
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 7e-08
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-07
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-07
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 55 1e-07
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 3e-07
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 54 3e-07
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 53 6e-07
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 52 8e-07
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 8e-07
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 52 1e-06
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 3e-06
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 4e-06
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 50 4e-06
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 4e-06
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 50 4e-06
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 50 5e-06
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-06
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 1e-05
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 1e-05
>AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:474516-476383 FORWARD
LENGTH=537
Length = 537
Score = 351 bits (900), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 212/546 (38%), Positives = 297/546 (54%), Gaps = 84/546 (15%)
Query: 1 MNLVRLISGRGRLLRQLC---------TGATEAN---------------RPAKKQG---- 32
MN LI+ RL ++ C TG EA+ PA + G
Sbjct: 1 MNFRNLIASGSRLGKRFCATVFAPASATGIVEASVSSPAAANVVEASVSSPAAENGVRTS 60
Query: 33 ------------LYQRLSEKEKTGLSASETLNQYMTEGRVAGKSELMRIVKELRKYRRFQ 80
LY++LS TG + +ETLNQ++ EG K +L R K LRK+RR Q
Sbjct: 61 VAAPTVASRQRELYKKLSMLSVTGGTVAETLNQFIMEGITVRKDDLFRCAKTLRKFRRPQ 120
Query: 81 DALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAMD-MYTYGTLL 139
A E+ +WMEKR F + +HA+ LDL+ KTKG+ AAE+YFN+L P A + TYG L+
Sbjct: 121 HAFEIFDWMEKRKMTFSVS-DHAICLDLIGKTKGLEAAENYFNNLDPSAKNHQSTYGALM 179
Query: 140 NCYCQELMADKALDLFDKMNELGYVT-SLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIP 198
NCYC EL +KA F+ M+EL +V SL FNN+M+++M+L QP KV LVD MKQR I
Sbjct: 180 NCYCVELEEEKAKAHFEIMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGIS 239
Query: 199 MSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAES 258
TY WM S +LNDLD +E+I ++M + E K W T+SNLA IY KA +EKA+S
Sbjct: 240 PCGVTYSIWMQSCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIYTKAGLYEKADS 299
Query: 259 MLRKLERKVKPRPREAYLAAIYVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKT 318
L+ +E K + P R+++H L+SLYA
Sbjct: 300 ALKSMEEK---------------------------------MNPNNRDSHHFLMSLYAGI 326
Query: 319 GNLEKVYKLWYFLKSVSPGINE-SYLIMICALKRLNDMKGLIKCFKEWESRCERYDLRLV 377
+VY++W LK P +N SYL+M+ A+ +L D+ G+ K F EWES+C YD+RL
Sbjct: 327 SKGPEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKIFTEWESKCWAYDMRLA 386
Query: 378 STVISAYLSEDMGEEAALVFKEAMKKSKGPFFKIRERFMVFFLEKRQLDGAVSHLEAALS 437
+ I+ YL +M EEA + AMKKSKGPF K R+ M+ LE + D A+ HLEAA+S
Sbjct: 387 NIAINTYLKGNMYEEAEKILDGAMKKSKGPFSKARQLLMIHLLENDKADLAMKHLEAAVS 446
Query: 438 EVV--GDEWRPFPHVVRAFVKYYKEETDLDGVDELSKILKTHNFDDS-----WLQSSIAA 490
+ DEW +V F ++++ D+DG ++ KIL DS +++ AA
Sbjct: 447 DSAENKDEWGWSSELVSLFFLHFEKAKDVDGAEDFCKILSNWKPLDSETMTFLIKTYAAA 506
Query: 491 SESSPE 496
++SP+
Sbjct: 507 EKTSPD 512
>AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:871268-872885 REVERSE
LENGTH=502
Length = 502
Score = 319 bits (818), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 186/479 (38%), Positives = 266/479 (55%), Gaps = 51/479 (10%)
Query: 12 RLLRQLC----------TGATEANRPAKKQ---GLYQRLSE-KEKTGLSASETLNQYMTE 57
RL R+ C +G A+ P K + +Y++LS + G ETLNQ++ E
Sbjct: 7 RLARRFCATLATATAEISGEAAASVPTKAKKHRSIYKKLSSLGTRGGGKMEETLNQFVME 66
Query: 58 GRVAGKSELMRIVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVA 117
G K +L+R K+LRK+R+ Q ALE+ EWME++ F + +HA+ L+L+ K+KG+ A
Sbjct: 67 GVPVKKHDLIRYAKDLRKFRQPQRALEIFEWMERKEIAFTGS-DHAIRLNLIAKSKGLEA 125
Query: 118 AESYFNSLPPPAMDMYTYGTLLNCYCQELMADKALDLFDKMNELGYVT-SLNFNNLMTLF 176
AE+YFNSL + TYG+LLNCYC E KA F+ M +L +V+ SL FNNLM ++
Sbjct: 126 AETYFNSLDDSIKNQSTYGSLLNCYCVEKEEVKAKAHFENMVDLNHVSNSLPFNNLMAMY 185
Query: 177 MKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIE 236
M LGQP KV LV MK+++I TY W+ S +L DLD VE++ ++MK E E
Sbjct: 186 MGLGQPEKVPALVVAMKEKSITPCDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIFS 245
Query: 237 WQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPREAYLAAIYVKDNKFKKAGEMFQKL 296
W T++NLA IY+K + KAE L+ LE
Sbjct: 246 WNTFANLAAIYIKVGLYGKAEEALKSLE-------------------------------- 273
Query: 297 EQKVRPRPREAYHCLISLYAKTGNLEKVYKLWYFLKSVSPGI-NESYLIMICALKRLNDM 355
+ P R+ YH LI+LY N +VY++W LK P + N SYL M+ AL +L+D+
Sbjct: 274 -NNMNPDVRDCYHFLINLYTGIANASEVYRVWDLLKKRYPNVNNSSYLTMLRALSKLDDI 332
Query: 356 KGLIKCFKEWESRCERYDLRLVSTVISAYLSEDMGEEAALVFKEAMKKSKGPFFKIRERF 415
G+ K F EWES C YD+R+ + IS+YL ++M EEA VF AMKK KG F K R+
Sbjct: 333 DGVKKVFAEWESTCWTYDMRMANVAISSYLKQNMYEEAEAVFNGAMKKCKGQFSKARQLL 392
Query: 416 MVFFLEKRQLDGAVSHLEAALSEVVGDEWRPFPHVVRAFVKYYKEETDLDGVDELSKIL 474
M+ L+ Q D A+ H EAA+ + W ++ +F +++E D+DG +E K L
Sbjct: 393 MMHLLKNDQADLALKHFEAAVLD-QDKNWTWSSELISSFFLHFEEAKDVDGAEEFCKTL 450
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 173/519 (33%), Positives = 272/519 (52%), Gaps = 53/519 (10%)
Query: 14 LRQLCTGATEANRPAKK---QGLYQRLSEKEKTGLSASETLNQYMTEGRVAGKSELMRIV 70
+R L R KK + LY RL + T + + LNQ++ + K E+ +
Sbjct: 3 MRHLSRSRDVTKRSTKKYIEEPLYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTI 62
Query: 71 KELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAM 130
K+LR + AL++ E ME+R + A+HLDLV K + + A E+YF LP +
Sbjct: 63 KKLRNRGLYYPALKLSEVMEERGMN-KTVSDQAIHLDLVAKAREITAGENYFVDLPETSK 121
Query: 131 DMYTYGTLLNCYCQELMADKALDLFDKMNELGYV-TSLNFNNLMTLFMKLGQPLKVHQLV 189
TYG+LLNCYC+EL+ +KA L +KM EL +S+++N+LMTL+ K G+ KV ++
Sbjct: 122 TELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMI 181
Query: 190 DEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVK 249
E+K N+ ++TY+ WM + AA ND+ VER+ E+M + +W TYSN+A IYV
Sbjct: 182 QELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVD 241
Query: 250 AEQFEKAESMLRKLERKVKPRPREAYLAAIYVKDNKFKKAGEMFQKLEQKVRPRPREAYH 309
A +KAE L Q+LE K R AY
Sbjct: 242 AGLSQKAEKAL---------------------------------QELEMKNTQRDFTAYQ 268
Query: 310 CLISLYAKTGNLEKVYKLWYFLKSVSPGI-NESYLIMICALKRLNDMKGLIKCFKEWESR 368
LI+LY + G L +VY++W L+ P N +YL MI L +LND+ G FKEW++
Sbjct: 269 FLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQAN 328
Query: 369 CERYDLRLVSTVISAYLSEDMGEEAALVFKEAMKKSKGPFFKIRERFMVFFLEKRQLDGA 428
C YD+R+V+ +I AY E + ++A + ++A ++ K E FM ++++ + A
Sbjct: 329 CSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMARA 388
Query: 429 VSHLEAALSEVVGD--EWRPFPHVVRAFVKYYKEETDLDGVDELSKILK--THNFD---- 480
+ + A+S GD +W P P VRA + Y++++ D++G + L +ILK T N
Sbjct: 389 LECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGAENLLEILKNGTDNIGAEIF 448
Query: 481 DSWLQSSIAASESSP------ENEDSIVNGALQNLQDDV 513
+ +++ AA +S P + E+ VN A + L D+V
Sbjct: 449 EPLIRTYAAAGKSHPAMRRRLKMENVEVNEATKKLLDEV 487
>AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:408779-410433 FORWARD
LENGTH=524
Length = 524
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 155/491 (31%), Positives = 251/491 (51%), Gaps = 41/491 (8%)
Query: 31 QGLYQRLSEKEKTGLSASETLNQYMTEGRVAGKSELMRIVKELRKYRRFQDALEVMEWME 90
+Y+++S EK L A+ LNQ+ GR K EL R+VKELRKY+R ALEV +WM
Sbjct: 67 NAIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMN 126
Query: 91 KRNSKFP-RTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAMDMYTYGTLLNCYCQELMAD 149
R +F + A+ LDL+ K +G+ AE +F LP D YG+LLN Y + +
Sbjct: 127 NRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSRE 186
Query: 150 KALDLFDKMNELGY-VTSLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWM 208
KA L + M + GY + L FN +MTL+M L + KV +V EMKQ++I + ++Y+ W+
Sbjct: 187 KAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWL 246
Query: 209 NSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVK 268
+S +L ++++E ++++MK + W T+S +A +Y+K + EKAE LRK
Sbjct: 247 SSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRK------ 300
Query: 269 PRPREAYLAAIYVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLW 328
+E ++ R R YH L+SLY GN +++Y++W
Sbjct: 301 ---------------------------VEARITGRNRIPYHYLLSLYGSLGNKKELYRVW 333
Query: 329 YFLKSVSPGI-NESYLIMICALKRLNDMKGLIKCFKEWESRCERYDLRLVSTVISAYLSE 387
+ KSV P I N Y ++ +L R+ D++G K ++EW YD R+ + +++AY+
Sbjct: 334 HVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKN 393
Query: 388 DMGEEAALVFKEAMKKSKGPFFKIRERFMVFFLEKRQLDGAVSHLEAALSEVVGDEWRPF 447
D E A +F ++ P E V KR + A++ L A S WRP
Sbjct: 394 DQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRCISEALTCLRNAFSAEGSSNWRPK 453
Query: 448 PHVVRAFVKYYKEETDLDGVDELSKILK-THNFDDSWLQSSIAASESSPENEDSI----V 502
++ F K +EE+D+ + + ++L+ + + +D + I E+ N I
Sbjct: 454 VLMLSGFFKLCEEESDVTSKEAVLELLRQSGDLEDKSYLALIDVDENRTVNNSEIDAHET 513
Query: 503 NGALQNLQDDV 513
+ L LQDD+
Sbjct: 514 DALLTQLQDDL 524
>AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11533257-11534817 REVERSE
LENGTH=492
Length = 492
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 134/451 (29%), Positives = 226/451 (50%), Gaps = 36/451 (7%)
Query: 28 AKKQGLYQRLSEKEKTGLSASETLNQYMTEGRVAGKSELMRIVKELRKYRRFQDALEVME 87
KK LY ++S S L ++ G+ +EL+RIV +LR+ +RF ALEV +
Sbjct: 22 VKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHALEVSK 81
Query: 88 WMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAMDMYTYGTLLNCYCQELM 147
WM + HAVHLDL+ + G V AE YF +L + TYG LLNCY ++
Sbjct: 82 WMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCYVRQQN 141
Query: 148 ADKALDLFDKMNELGYVT-SLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHA 206
+K+L F+KM E+G+VT SL +NN+M L+ +GQ KV ++++EMK+ N+ ++Y
Sbjct: 142 VEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYRI 201
Query: 207 WMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERK 266
+N++ A+ DL+ + M+ + ++W TY+ A Y+ ++A +L+ E +
Sbjct: 202 CINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLKMSENR 261
Query: 267 VKPRPREAYLAAIYVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYK 326
++ KK G E Y+ LI+LYA+ G +V +
Sbjct: 262 LE------------------KKDG---------------EGYNHLITLYARLGKKIEVLR 288
Query: 327 LWYFLKSVSP-GINESYLIMICALKRLNDMKGLIKCFKEWESRCERYDLRLVSTVISAYL 385
LW K V IN+ YL ++ +L +++ + + EW+S YD R+ +TVI Y+
Sbjct: 289 LWDLEKDVCKRRINQDYLTVLQSLVKIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYI 348
Query: 386 SEDMGEEAALVFKEAMKKSKGPFFKIRERFMVFFLEKRQLDGAVSHLEAALSEVVGD-EW 444
+ M E+A + ++ ++ K + E + EK L+ A ++ AL VG +W
Sbjct: 349 GKSMEEKAEAMLEDLARRGKATTPESWELVATAYAEKGTLENAFKCMKTALGVEVGSRKW 408
Query: 445 RPFPHVVRAFVKYYKEETDLDGVDELSKILK 475
RP +V + + + +E L V+ L+
Sbjct: 409 RPGLTLVTSVLSWVGDEGSLKEVESFVASLR 439
>AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8926110-8927722 FORWARD
LENGTH=490
Length = 490
Score = 192 bits (487), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 226/443 (51%), Gaps = 34/443 (7%)
Query: 33 LYQRLSEKEKTGLSASETLNQYMTEGRVAGKSELMRIVKELRKYRRFQDALEVMEWMEKR 92
L +R++ S + L+ ++ +G + SEL I+K LRK+ RF AL++ +WM +
Sbjct: 40 LQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMSEH 99
Query: 93 NSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAMDMYTYGTLLNCYCQELMADKAL 152
+ A+ LDL+ K G+ AE +F ++P + + YG LLNCY + + KA
Sbjct: 100 RVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAE 159
Query: 153 DLFDKMNELGYVTS-LNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSY 211
+F +M ELG++ L +N ++ L+++ G+ V +L+ EM+ + FT + +++Y
Sbjct: 160 QVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAY 219
Query: 212 AALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRP 271
+ ++D++ +E+ + + + ++W+TY++ A Y+KA EKA MLRK E+ V +
Sbjct: 220 SVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQK 279
Query: 272 REAYLAAIYVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLWYFL 331
R + AY L+S Y G E+VY+LW
Sbjct: 280 R--------------------------------KHAYEVLMSFYGAAGKKEEVYRLWSLY 307
Query: 332 KSVSPGINESYLIMICALKRLNDMKGLIKCFKEWESRCERYDLRLVSTVISAYLSEDMGE 391
K + N Y+ +I AL +++D++ + K +EWE+ +D+R+ +I+ Y + M E
Sbjct: 308 KELDGFYNTGYISVISALLKMDDIEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMME 367
Query: 392 EAALVFKEAMKKSKGPFFKIRERFMVFFLEKRQLDGAVSHLEAALSEVVGDEWRPFPHVV 451
+A V ++K + ER + + +++ AV + A+ EV WRP V+
Sbjct: 368 KAEEVVNILVQKWRVEDTSTWERLALGYKMAGKMEKAVEKWKRAI-EVSKPGWRPHQVVL 426
Query: 452 RAFVKYYKEETDLDGVDELSKIL 474
+ V Y + + D++G+ ++ ++L
Sbjct: 427 MSCVDYLEGQRDMEGLRKILRLL 449
>AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:1258581-1260265 FORWARD
LENGTH=532
Length = 532
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 139/495 (28%), Positives = 249/495 (50%), Gaps = 56/495 (11%)
Query: 3 LVRLISGRGRLLRQLCTGATEANRPAKKQG----LYQRLSEKEKTGLSASETLNQYMTEG 58
+V+ SG G+ G AN+ G L RL T SA T+ ++ EG
Sbjct: 36 VVKPRSGGGK-------GGESANKKETVVGGRDTLGGRLLSLVYTKRSAVVTIRKWKEEG 88
Query: 59 RVAGKSELMRIVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAA 118
K EL RIV+ELRK +R++ ALE+ EWM + + ++AVHLDL+ K +G+ +A
Sbjct: 89 HSVRKYELNRIVRELRKIKRYKHALEICEWMVVQEDIKLQAGDYAVHLDLISKIRGLNSA 148
Query: 119 ESYFNSLPPPAMDMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTS-LNFNNLMTLFM 177
E +F +P +LL+ Y Q ++DKA LF+KM E G++ S L +N+++++++
Sbjct: 149 EKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLPYNHMLSMYI 208
Query: 178 KLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEW 237
GQ KV L+ E+K R P TY+ W+ ++A+ ND++ E+++ K K E++ +W
Sbjct: 209 SRGQFEKVPVLIKELKIRTSP-DIVTYNLWLTAFASGNDVEGAEKVYLKAK-EEKLNPDW 266
Query: 238 QTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPREAYLAAIYVKDNKFKKAGEMFQKLE 297
TYS L +Y K + EKA L+++E+ V + R AY +
Sbjct: 267 VTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVAYAS-------------------- 306
Query: 298 QKVRPRPREAYHCLISLYAKTGNLEKVYKLWYFLKSVSPGINES-YLIMICALKRLNDMK 356
LISL+A G+ + V W +KS +N++ YL MI A+ +L + +
Sbjct: 307 -------------LISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFE 353
Query: 357 GLIKCFKEWESRCERYDLRLVSTVISAYLSED---MGEEAALVFKEAMKKSKGPFFKIRE 413
+ EWES D R+ + +++ Y++ D +GE+ ++ ++K P + E
Sbjct: 354 QAKGLYDEWESVSGTGDARIPNLILAEYMNRDEVLLGEK---FYERIVEKGINPSYSTWE 410
Query: 414 RFMVFFLEKRQLDGAVSHLEAALSEVVGDEWRPFPHVVRAFVKYYKEETDLDGVDELSKI 473
+L+++ ++ + A+ V +W +V+ K +E+ ++ G ++L +
Sbjct: 411 ILTWAYLKRKDMEKVLDCFGKAIDSV--KKWTVNVRLVKGACKELEEQGNVKGAEKLMTL 468
Query: 474 LKTHNFDDSWLQSSI 488
L+ + ++ L +S+
Sbjct: 469 LQKAGYVNTQLYNSL 483
>AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9693262-9694815 REVERSE
LENGTH=491
Length = 491
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 220/463 (47%), Gaps = 47/463 (10%)
Query: 12 RLLRQLCTGA---TEANRPAKKQGLYQRLSEKEKTGLSASETLNQYMTEGRVAGKSELMR 68
RL+ L G+ + ANR + K+ L + + T L L + + G SEL
Sbjct: 21 RLVSSLADGSDTSSVANRNSLKEILRKNGPRRSVTSL-----LQERIDSGHAVSLSELRL 75
Query: 69 IVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPP 128
I K L + R+ AL++MEWME + Y+ A+ LDL+ KT G+ E YF L
Sbjct: 76 ISKRLIRSNRYDLALQMMEWMENQKDIEFSVYDIALRLDLIIKTHGLKQGEEYFEKLLHS 135
Query: 129 AMDMYT----YGTLLNCYCQELMADKALDLFDKMNELGY-VTSLNFNNLMTLFMKLGQPL 183
++ M Y LL Y + M +A L +K+N LG+ VT FN +M L+ GQ
Sbjct: 136 SVSMRVAKSAYLPLLRAYVKNKMVKEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYE 195
Query: 184 KVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNL 243
KV +V MK IP + +Y+ WMN+ ++ + VE ++++M + ++ W + L
Sbjct: 196 KVVMVVSMMKGNKIPRNVLSYNLWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTL 255
Query: 244 AVIYVKAEQFEKAESMLRKLERKVKPRPREAYLAAIYVKDNKFKKAGEMFQKLEQKVRPR 303
A +Y+K+ EKA +L E+ + N+ + G F
Sbjct: 256 ANVYIKSGFDEKARLVLEDAEKML----------------NRSNRLGYFF---------- 289
Query: 304 PREAYHCLISLYAKTGNLEKVYKLWYFLKSVSPGIN-ESYLIMICALKRLNDMKGLIKCF 362
LI+LYA GN E V +LW KSV I+ +Y+ ++ +L + D++ + F
Sbjct: 290 -------LITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAERVF 342
Query: 363 KEWESRCERYDLRLVSTVISAYLSEDMGEEAALVFKEAMKKSKGPFFKIRERFMVFFLEK 422
EWE++C YD+R+ + ++ AY+ +A + +++ P +K E M +++
Sbjct: 343 SEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGWVKC 402
Query: 423 RQLDGAVSHLEAALSEVVGDEWRPFPHVVRAFVKYYKEETDLD 465
++ A+ + + WRP ++V A +Y+++E ++
Sbjct: 403 ENMEKAIDAMHQVFVLMRRCHWRPSHNIVMAIAEYFEKEEKIE 445
>AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8926535-8927722 FORWARD
LENGTH=395
Length = 395
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 191/373 (51%), Gaps = 34/373 (9%)
Query: 103 AVHLDLVCKTKGVVAAESYFNSLPPPAMDMYTYGTLLNCYCQELMADKALDLFDKMNELG 162
A+ LDL+ K G+ AE +F ++P + + YG LLNCY + + KA +F +M ELG
Sbjct: 15 AIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAEQVFQEMKELG 74
Query: 163 YVTS-LNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVE 221
++ L +N ++ L+++ G+ V +L+ EM+ + FT + +++Y+ ++D++ +E
Sbjct: 75 FLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVVSDVEGME 134
Query: 222 RIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPREAYLAAIYV 281
+ + + + ++W+TY++ A Y+KA EKA MLRK E+ V + R
Sbjct: 135 KFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKR--------- 185
Query: 282 KDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLWYFLKSVSPGINES 341
+ AY L+S Y G E+VY+LW K + N
Sbjct: 186 -----------------------KHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTG 222
Query: 342 YLIMICALKRLNDMKGLIKCFKEWESRCERYDLRLVSTVISAYLSEDMGEEAALVFKEAM 401
Y+ +I AL +++D++ + K +EWE+ +D+R+ +I+ Y + M E+A V +
Sbjct: 223 YISVISALLKMDDIEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILV 282
Query: 402 KKSKGPFFKIRERFMVFFLEKRQLDGAVSHLEAALSEVVGDEWRPFPHVVRAFVKYYKEE 461
+K + ER + + +++ AV + A+ EV WRP V+ + V Y + +
Sbjct: 283 QKWRVEDTSTWERLALGYKMAGKMEKAVEKWKRAI-EVSKPGWRPHQVVLMSCVDYLEGQ 341
Query: 462 TDLDGVDELSKIL 474
D++G+ ++ ++L
Sbjct: 342 RDMEGLRKILRLL 354
>AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2941864-2943324 FORWARD
LENGTH=409
Length = 409
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 173/352 (49%), Gaps = 38/352 (10%)
Query: 46 SASETLNQYMTEGRVAGKSELMRIVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVH 105
SA+ L +++ EG +EL I KELR+ RR++ ALEV EWM + ++A
Sbjct: 70 SATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEWMVQHEESKISDADYASR 129
Query: 106 LDLVCKTKGVVAAESYFNSLPPPAMDMYTYGTLLNCYCQELMADKALDLFDKMNELGYVT 165
+DL+ K G+ AAE YF L + TY +LL+ Y ++A LF ++ E +T
Sbjct: 130 IDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTERAEALFKRIIESDSLT 189
Query: 166 --SLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERI 223
++ +N +MTL+M +GQ KV ++++ +KQ+ + FTY+ W++S AA ++DE+ +I
Sbjct: 190 FGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLSSCAATFNIDELRKI 249
Query: 224 FEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPREAYLAAIYVKD 283
E+M+ + W Y +L IY+ + + AES L P EA
Sbjct: 250 LEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTL----------PVEA--------- 290
Query: 284 NKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLWYFLKSVSPGINE-SY 342
E+ + R Y L+ L+ GN + ++W L++ + ++ SY
Sbjct: 291 -------------EKSISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSY 337
Query: 343 LIMICALKRLNDMKGLIKCFKEW-ESRCERYDLRLVSTVISAYLSEDMGEEA 393
+ ++ + L ++ + +W ES+ +D +++A+ D+G E
Sbjct: 338 ICVLSSYLMLGHLREAEEIIHQWKESKTTEFDASACLRILNAF--RDVGLEG 387
>AT1G28020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:9768395-9771157 REVERSE
LENGTH=612
Length = 612
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 164/352 (46%), Gaps = 45/352 (12%)
Query: 50 TLNQYMTEGRVAGKSELMRIVKELRKYRRFQDALEVMEWM--EKRNSKFPRTYNHAVHLD 107
L Q+ +G S + I+K+LR + AL+V EWM EK + P + A L
Sbjct: 55 VLEQWRQQGNQVNPSHVRVIIKKLRDSDQSLQALQVSEWMSKEKICNLIPEDF--AARLH 112
Query: 108 LVCKTKGVVAAESYFNSLPPPAMDMYTYGTLLNCYCQELMADKAL----DLFDKMNELGY 163
L+ G+ AE +F S+P A Y +LLN Y + +DK L F KM +LG
Sbjct: 113 LIENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYAR---SDKTLCKAEATFQKMRDLGL 169
Query: 164 VT-SLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVER 222
+ + +N +M+L+ L KV +L+ EMK ++ T + + Y+A+ D+ E+E+
Sbjct: 170 LLRPVPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCDVTEMEK 229
Query: 223 IFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPREAYLAAIYVK 282
K + K+EW T ++A Y++A KA MLR E+ V
Sbjct: 230 FLNKWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLV--------------- 274
Query: 283 DNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLWYFLKS-VSPGINES 341
D K K+ AY L+ LY + GN E+V ++W KS + N
Sbjct: 275 DQKSLKS-----------------AYDHLMKLYGEAGNREEVLRVWKLYKSKIGERDNNG 317
Query: 342 YLIMICALKRLNDMKGLIKCFKEWESRCERYDLRLVSTVISAYLSEDMGEEA 393
Y +I +L +++D+ G + +K WES +D R+ + + S Y M E+A
Sbjct: 318 YRTVIRSLLKVDDIVGAEEIYKVWESLPLEFDHRIPTMLASGYRDRGMTEKA 369
>AT3G15590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5275568-5277658 REVERSE
LENGTH=610
Length = 610
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 132/251 (52%), Gaps = 12/251 (4%)
Query: 21 ATEANRPAKKQG---LYQRLSEKEKTGLSASETLNQYMTEGRVAGKSELMRIVKELRKYR 77
+ + +P KK+G LY+ + + S L +++ EG+ ++E+ + LRK +
Sbjct: 132 SKDGGKPTKKRGQSELYESIVAYK----SVKHVLEKWVKEGKDLSQAEVTLAIHNLRKRK 187
Query: 78 RFQDALEVMEWMEKRNSKFPRT-YNHAVHLDLVCKTKGVVAAESYFNSLPPPAMDMYTYG 136
+ L++ EW+ N++F T N+A LDLV K + AE + +P + Y
Sbjct: 188 SYAMCLQLWEWLGA-NTQFEFTEANYASQLDLVAKVHSLQKAEIFLKDIPESSRGEVVYR 246
Query: 137 TLL-NCYCQELMADKALDLFDKMNELGYVTSLNFNNLMTLFMKLGQPLKVHQLVDEMKQR 195
TLL NC + +KA D+F+KM EL + TS+ N + L + K+ ++ M++
Sbjct: 247 TLLANCVLKH-HVNKAEDIFNKMKELKFPTSVFACNQLLLLYSMHDRKKISDVLLLMERE 305
Query: 196 NIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEK 255
NI S TYH +NS D+ +E+I E +K E+ +++ + S LA Y++A E+
Sbjct: 306 NIKPSRATYHFLINSKGLAGDITGMEKIVETIK-EEGIELDPELQSILAKYYIRAGLKER 364
Query: 256 AESMLRKLERK 266
A+ +++++E K
Sbjct: 365 AQDLMKEIEGK 375
>AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 144/312 (46%), Gaps = 40/312 (12%)
Query: 44 GLSASETLNQYMTEGRVAGKSELMRIVKELRKYRRFQDALEVMEWMEKRNSKFPRT-YNH 102
GLS L++++ EG + E+ + + +LR+ R + AL++ EW+E N K T ++
Sbjct: 141 GLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEA-NKKIEMTERDY 199
Query: 103 AVHLDLVCKTKGVVAAESYFNSLPPPAMDMYTYGTLL-NCYCQELMADKALDLFDKMNEL 161
A LDL K +G+ E+ +P Y TLL NC + L +F+KM +L
Sbjct: 200 ASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSEL-VFNKMKDL 258
Query: 162 GYVTSLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVE 221
G+ S + M L K K+ ++ M++ NI S TY ++ A ND+ +E
Sbjct: 259 GFPLSGFTCDQMLLLHKRIDRKKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGME 318
Query: 222 RIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPREAYLAAIYV 281
+I E MK E + +++QT + A Y A +KAE +L+++E
Sbjct: 319 QILETMKDEGVE-LDFQTQALTARHYSGAGLKDKAEKVLKEME----------------- 360
Query: 282 KDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLWYFLKSVSPGINES 341
GE + R A+ L+S+YA G ++V ++W +S P ES
Sbjct: 361 --------GESLEA--------NRRAFKDLLSIYASLGREDEVKRIWKICES-KPYFEES 403
Query: 342 YLIMICALKRLN 353
L I A +LN
Sbjct: 404 -LAAIQAFGKLN 414
>AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 144/312 (46%), Gaps = 40/312 (12%)
Query: 44 GLSASETLNQYMTEGRVAGKSELMRIVKELRKYRRFQDALEVMEWMEKRNSKFPRT-YNH 102
GLS L++++ EG + E+ + + +LR+ R + AL++ EW+E N K T ++
Sbjct: 141 GLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEA-NKKIEMTERDY 199
Query: 103 AVHLDLVCKTKGVVAAESYFNSLPPPAMDMYTYGTLL-NCYCQELMADKALDLFDKMNEL 161
A LDL K +G+ E+ +P Y TLL NC + L +F+KM +L
Sbjct: 200 ASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSEL-VFNKMKDL 258
Query: 162 GYVTSLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVE 221
G+ S + M L K K+ ++ M++ NI S TY ++ A ND+ +E
Sbjct: 259 GFPLSGFTCDQMLLLHKRIDRKKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGME 318
Query: 222 RIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPREAYLAAIYV 281
+I E MK E + +++QT + A Y A +KAE +L+++E
Sbjct: 319 QILETMKDEGVE-LDFQTQALTARHYSGAGLKDKAEKVLKEME----------------- 360
Query: 282 KDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLWYFLKSVSPGINES 341
GE + R A+ L+S+YA G ++V ++W +S P ES
Sbjct: 361 --------GESLEA--------NRRAFKDLLSIYASLGREDEVKRIWKICES-KPYFEES 403
Query: 342 YLIMICALKRLN 353
L I A +LN
Sbjct: 404 -LAAIQAFGKLN 414
>AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 144/312 (46%), Gaps = 40/312 (12%)
Query: 44 GLSASETLNQYMTEGRVAGKSELMRIVKELRKYRRFQDALEVMEWMEKRNSKFPRT-YNH 102
GLS L++++ EG + E+ + + +LR+ R + AL++ EW+E N K T ++
Sbjct: 141 GLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEA-NKKIEMTERDY 199
Query: 103 AVHLDLVCKTKGVVAAESYFNSLPPPAMDMYTYGTLL-NCYCQELMADKALDLFDKMNEL 161
A LDL K +G+ E+ +P Y TLL NC + L +F+KM +L
Sbjct: 200 ASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSEL-VFNKMKDL 258
Query: 162 GYVTSLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVE 221
G+ S + M L K K+ ++ M++ NI S TY ++ A ND+ +E
Sbjct: 259 GFPLSGFTCDQMLLLHKRIDRKKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGME 318
Query: 222 RIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPREAYLAAIYV 281
+I E MK E + +++QT + A Y A +KAE +L+++E
Sbjct: 319 QILETMKDEGVE-LDFQTQALTARHYSGAGLKDKAEKVLKEME----------------- 360
Query: 282 KDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLWYFLKSVSPGINES 341
GE + R A+ L+S+YA G ++V ++W +S P ES
Sbjct: 361 --------GESLEA--------NRRAFKDLLSIYASLGREDEVKRIWKICES-KPYFEES 403
Query: 342 YLIMICALKRLN 353
L I A +LN
Sbjct: 404 -LAAIQAFGKLN 414
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 169/369 (45%), Gaps = 29/369 (7%)
Query: 64 SELMRIVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNH--AVHLDLVCKTKGVVAAESY 121
SEL+ +K L +++F AL +W K+ N A+ + ++ K V +A +
Sbjct: 136 SELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANM 195
Query: 122 FNSLPPP--AMDMYTYGTLLNCYCQELMADKALDLFDKMNELGY-VTSLNFNNLMTLFMK 178
FN L ++D+Y+Y +L++ + +A+++F KM E G T + +N ++ +F K
Sbjct: 196 FNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGK 255
Query: 179 LGQPL-KVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVE--DEDKI 235
+G P K+ LV++MK I A+TY+ + + E ++FE+MK DK+
Sbjct: 256 MGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKV 315
Query: 236 EWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPREAY--LAAIYVKDNKFKKAGEMF 293
TY+ L +Y K+ + ++A +L ++ Y L + Y +D +A E+
Sbjct: 316 ---TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELK 372
Query: 294 QKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLWYFLKSVSPGINESYLIMICALKRLN 353
++ +K Y L+S + + G +E ++ +++ N IC
Sbjct: 373 NQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN------ICTFNAFI 426
Query: 354 DMKG-------LIKCFKEWESRCERYDLRLVSTVISAYLSEDMGEEAALVFKEAMKKSKG 406
M G ++K F E D+ +T+++ + M E + VFKE MK++
Sbjct: 427 KMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKE-MKRAG- 484
Query: 407 PFFKIRERF 415
F RE F
Sbjct: 485 -FVPERETF 492
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 160/374 (42%), Gaps = 23/374 (6%)
Query: 40 KEKTGLSASETLNQYMTEGRVAGKSELMRIVKELRKYRRFQDALEVMEWMEKRNSKFPRT 99
KE SA+ N +G ++ R+++A+ V + ME+ K P
Sbjct: 185 KEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCK-PTL 243
Query: 100 YNHAVHLDLVCK--------TKGVVAAESYFNSLPPPAMDMYTYGTLLNCYCQELMADKA 151
+ V L++ K T V +S + + P D YTY TL+ C + + +A
Sbjct: 244 ITYNVILNVFGKMGTPWNKITSLVEKMKS--DGIAP---DAYTYNTLITCCKRGSLHQEA 298
Query: 152 LDLFDKMNELGY-VTSLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNS 210
+F++M G+ + +N L+ ++ K +P + ++++EM S TY++ +++
Sbjct: 299 AQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 358
Query: 211 YAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPR 270
YA LDE + +M E K + TY+ L + +A + E A S+ ++ R +
Sbjct: 359 YARDGMLDEAMELKNQM-AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM-RNAGCK 416
Query: 271 PREAYLAA---IYVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKL 327
P A +Y KF + ++F ++ ++ L++++ + G +V +
Sbjct: 417 PNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGV 476
Query: 328 WYFLKSVS--PGINESYLIMICALKRLNDMKGLIKCFKEWESRCERYDLRLVSTVISAYL 385
+ +K P E++ +I A R + + ++ DL +TV++A
Sbjct: 477 FKEMKRAGFVPE-RETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALA 535
Query: 386 SEDMGEEAALVFKE 399
M E++ V E
Sbjct: 536 RGGMWEQSEKVLAE 549
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 168/370 (45%), Gaps = 19/370 (5%)
Query: 65 ELMRIVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNS 124
+L I+++ R+QD +++ EWM++ TY+ + K V A + S
Sbjct: 100 DLNVILRDFGISGRWQDLIQLFEWMQQHGKISVSTYSSCIKF---VGAKNVSKALEIYQS 156
Query: 125 LPPPA--MDMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTS-LNFNNLMTLFMKL-- 179
+P + +++Y ++L+C + D + LFD+M G + +N L+ +K+
Sbjct: 157 IPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKN 216
Query: 180 GQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQT 239
G P K +L+ E+ I M + Y + A+ +E E ++MKVE +
Sbjct: 217 GYP-KAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYH- 274
Query: 240 YSNLAVIYVKAEQFEKAESMLRKLERKVKPRPREAYLAA---IYVKDNKFKKAGEMFQKL 296
YS+L Y ++KA+ ++ ++ + + P + + +Y+K F ++ E+ +L
Sbjct: 275 YSSLLNSYSWKGDYKKADELMTEM-KSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSEL 333
Query: 297 EQKVRPRPREAYHCLISLYAKTGNLEKVYKLWYFLKSV---SPGINESYLIMICALKRLN 353
E Y L+ +K G LE+ ++ +K S G S IMI AL R
Sbjct: 334 ESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANS--IMISALCRSK 391
Query: 354 DMKGLIKCFKEWESRCERYDLRLVSTVISAYLSEDMGEEAALVFKEAMKKSKGPFFKIRE 413
K + ++ E+ E+ DL +++T++ AY E + K+ +++ P +
Sbjct: 392 RFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFH 451
Query: 414 RFMVFFLEKR 423
+ +F++++
Sbjct: 452 ILIKYFIKEK 461
>AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5318307-5320422 FORWARD
LENGTH=594
Length = 594
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 112/222 (50%), Gaps = 1/222 (0%)
Query: 43 TGLSASETLNQYMTEGRVAGKSELMRIVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNH 102
+GLS L++++ +G+ + E + +LRK R F AL++ EW+++ ++
Sbjct: 138 SGLSVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQMTEWLDENKQFEMEERDY 197
Query: 103 AVHLDLVCKTKGVVAAESYFNSLPPPAMDMYTYGTLLNCYCQELMADKALDLFDKMNELG 162
A LDL+ K +G E+Y ++P Y TLL + A +F+KM +LG
Sbjct: 198 ACRLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVATSNVRTAEAVFNKMKDLG 257
Query: 163 YVTSLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVER 222
+ S N M + K K+ ++ +++ N+ + TY +++ + ND+ +E+
Sbjct: 258 FPLSTFTCNQMLILYKRVDKKKIADVLLLLEKENLKPNLNTYKILIDTKGSSNDITGMEQ 317
Query: 223 IFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLE 264
I E MK E + ++ + + +A Y A EKAE +L+++E
Sbjct: 318 IVETMKSEGVE-LDLRARALIARHYASAGLKEKAEKVLKEME 358
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 150/338 (44%), Gaps = 11/338 (3%)
Query: 79 FQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCK-TKGVVAAESYFNSLPPPAMDMYTYGT 137
+Q ALEV EW+ R+ P A L ++ + + +A E + + P + Y
Sbjct: 171 WQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYNA 230
Query: 138 LLNCYCQELMADKALDLFDKMNELGYVTSL-NFNNLMTLFMKLG--QPLKVHQLVDEMKQ 194
++ Y + KA +L D M + G V L +FN L+ +K G P +L+D ++
Sbjct: 231 MMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRN 290
Query: 195 RNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFE 254
+ A TY+ +++ + ++LD ++FE M+ W TY+ + +Y +
Sbjct: 291 SGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLW-TYNAMISVYGRCGLAA 349
Query: 255 KAESMLRKLERKVKPRPREAYLAAIY--VKDNKFKKAGEMFQKLEQKVRPRPREAYHCLI 312
+AE + +LE K Y + +Y ++ +K E++Q++++ + Y+ +I
Sbjct: 350 EAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTII 409
Query: 313 SLYAKTGNLEKVYKLWYFLKSVSPGINE---SYLIMICALKRLNDMKGLIKCFKEWESRC 369
+Y K G L+ +L+ +K +S G N +Y ++I +L + N E
Sbjct: 410 HMYGKQGQLDLALQLYKDMKGLS-GRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVG 468
Query: 370 ERYDLRLVSTVISAYLSEDMGEEAALVFKEAMKKSKGP 407
+ L+ S +I Y EEA F ++ P
Sbjct: 469 IKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKP 506
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 114/258 (44%), Gaps = 10/258 (3%)
Query: 131 DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVT-SLNFNNLMTLFMKLGQPLKVHQLV 189
D++TY +++ Y + +A +A LF ++ G+ ++ +N+L+ F + KV ++
Sbjct: 331 DLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVY 390
Query: 190 DEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVK 249
+M++ TY+ ++ Y LD ++++ MK + TY+ L K
Sbjct: 391 QQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGK 450
Query: 250 AEQ-FEKAESMLRKLERKVKPRPREAYLAAI--YVKDNKFKKAGEMFQKLEQKVRPRPRE 306
A + E A M L+ +KP + Y A I Y K K ++A + F + +
Sbjct: 451 ANRTVEAAALMSEMLDVGIKP-TLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNL 509
Query: 307 AYHCLISLYAKTGNLEKVYKLWYFLKSVSPGINESYL---IMICALKRLNDMKGLIKCFK 363
AY ++ + + K + L+ + +S G SY +MI L + N + K +
Sbjct: 510 AYSVMLDVLLRGNETRKAWGLYRDM--ISDGHTPSYTLYELMILGLMKENRSDDIQKTIR 567
Query: 364 EWESRCERYDLRLVSTVI 381
+ E C L + S ++
Sbjct: 568 DMEELCGMNPLEISSVLV 585
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 100/199 (50%), Gaps = 8/199 (4%)
Query: 154 LFDKMNELGYVTSLNFNNLMTLFMKLGQPLK-VHQLVDEMKQRNIPMSAFTYHAWMNSYA 212
++ M GY+ ++ +M + G+ ++ +V EM++ N + +++ + Y
Sbjct: 879 IYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYT 938
Query: 213 ALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPR 272
A+ D + ++++++K + E TY+ L ++Y + + E+ +++++ R + P+
Sbjct: 939 AIEDYKKTVQVYQRIKETGLEPDE-TTYNTLIIMYCRDRRPEEGYLLMQQM-RNLGLDPK 996
Query: 273 -EAY--LAAIYVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLWY 329
+ Y L + + K ++A ++F++L K R YH ++ + +G+ K KL
Sbjct: 997 LDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQ 1056
Query: 330 FLKS--VSPGINESYLIMI 346
+K+ + P + +L+M+
Sbjct: 1057 MMKNAGIEPTLATMHLLMV 1075
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 136/279 (48%), Gaps = 10/279 (3%)
Query: 63 KSELMRIVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAV---HLDLVCKTKGVVAAE 119
+++L+ +VK L ++ A+ + EW+ ++ +H V + ++ + A
Sbjct: 136 RTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAA 195
Query: 120 SYFNSLPPPA--MDMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTSL-NFNNLMTLF 176
+ +P +D+ Y T+L+ Y + +KA+DLF++M E+G +L +N ++ +F
Sbjct: 196 KLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVF 255
Query: 177 MKLGQPL-KVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKI 235
K+G+ K+ ++DEM+ + + FT +++ A L E + F ++K +
Sbjct: 256 GKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEP- 314
Query: 236 EWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPREAY--LAAIYVKDNKFKKAGEMF 293
TY+ L ++ KA + +A S+L+++E P Y L A YV+ K+A +
Sbjct: 315 GTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVI 374
Query: 294 QKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLWYFLK 332
+ + +K Y +I Y K G ++ KL+Y +K
Sbjct: 375 EMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMK 413
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 175/421 (41%), Gaps = 38/421 (9%)
Query: 17 LCTGATEANRPAKKQGLYQRLSE-KEKTGLSASETL-NQYMTEGRVAGKSELMRIVKELR 74
L G R ++ L R+ E K++ L TL N +GRV SE + ++ +
Sbjct: 146 LVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRV---SEALVLIDRMV 202
Query: 75 KYRRFQD-------------------ALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGV 115
+Y D AL++ ME+RN K +++ +D +CK
Sbjct: 203 EYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIK-ASVVQYSIVIDSLCKDGSF 261
Query: 116 VAAESYFNSLPPPAM--DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTSL-NFNNL 172
A S FN + + D+ TY +L+ C + D + +M + + F+ L
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321
Query: 173 MTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDE 232
+ +F+K G+ L+ +L +EM R I TY++ ++ + N L E ++F+ M V
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM-VSKG 380
Query: 233 DKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPREAY--LAAIYVKDNKFKKAG 290
+ + TYS L Y KA++ + + R++ K Y L + + K A
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 440
Query: 291 EMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLWYFLK----SVSPGINESYLIMI 346
E+FQ++ + P Y L+ G L K +++ ++ ++ GI + +
Sbjct: 441 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM 500
Query: 347 CALKRLNDMKGLIKCFKEWESRCERYDLRLVSTVISAYLSEDMGEEAALVFKEAMKKSKG 406
C +++D L F + + D+ + +I + EA ++F++ +
Sbjct: 501 CNASKVDDAWSL---FCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCT 557
Query: 407 P 407
P
Sbjct: 558 P 558
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 154/338 (45%), Gaps = 20/338 (5%)
Query: 82 ALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAM--DMYTYGTLL 139
AL ++ MEK + V +D +CK + V A + F + + D++TY +L+
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTV-IDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
Query: 140 NCYCQ-ELMADKALDLFDKMNELGYVTSLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIP 198
+C C +D + L D + + FN+L+ F K G+ ++ +L DEM QR+I
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342
Query: 199 MSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAES 258
+ TY++ +N + + LDE ++IF M V + + TY+ L + KA++
Sbjct: 343 PNIVTYNSLINGFCMHDRLDEAQQIFTLM-VSKDCLPDVVTYNTLINGFCKAKKVVDGME 401
Query: 259 MLRKLERKVKPRPREAYLAAI--YVKDNKFKKAGEMF-QKLEQKVRPRPREAYHCLISLY 315
+ R + R+ Y I + + + A +F Q + V P Y+ L+
Sbjct: 402 LFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIM-TYNTLLDGL 460
Query: 316 AKTGNLEKVYKLWYFLK--SVSPGINESYLIM---ICALKRLNDMKGLIKCFKEWESRCE 370
K G LEK ++ +L+ + P I +Y IM +C ++ D L F +
Sbjct: 461 CKNGKLEKAMVVFEYLQKSKMEPDI-YTYNIMSEGMCKAGKVEDGWDL---FCSLSLKGV 516
Query: 371 RYDLRLVSTVISAYLSEDMGEEAALVFKEAMKKSKGPF 408
+ D+ +T+IS + + + EEA +F + K GP
Sbjct: 517 KPDVIAYNTMISGFCKKGLKEEAYTLFIKM--KEDGPL 552
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 10/209 (4%)
Query: 109 VCKTKGVVAAESYFNSLPPPAMDMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTSL- 167
C + ++ N + P ++ T GT++N YC+E ++AL F +M ELG +L
Sbjct: 511 TCTAEDMIIPRMLHNKVKP---NVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLF 567
Query: 168 NFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKM 227
FN+L+ F+ + V ++VD M++ + T+ MN+++++ D+ E I+ M
Sbjct: 568 VFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDM 627
Query: 228 KVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPREAYLAAI---YVKDN 284
+E + +S LA Y +A + EKAE +L ++ RK RP I +
Sbjct: 628 -LEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQM-RKFGVRPNVVIYTQIISGWCSAG 685
Query: 285 KFKKAGEMFQKLEQKVRPRPR-EAYHCLI 312
+ KKA ++++K+ V P Y LI
Sbjct: 686 EMKKAMQVYKKMCGIVGLSPNLTTYETLI 714
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 127/279 (45%), Gaps = 13/279 (4%)
Query: 118 AESYFNSLPPPAM--DMYTYGTLLNCYCQELMADKALDLFDKMNELGY-VTSLNFNNLMT 174
A S FN+L + TY TL+ ++ L L K+ + G ++ FN ++
Sbjct: 338 AHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIIN 397
Query: 175 LFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDK 234
+ G + ++ ++MK+ +A T++ + Y + L+E R+ + M ++ +
Sbjct: 398 ASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQ 457
Query: 235 IEWQTYSNLAVIYVKAEQFEKAESMLRKLER-KVKPRPRE-AYLAAIYVKDNKFKKAGEM 292
+T + L + + E+A +++ K++ VKP LA Y + A +M
Sbjct: 458 PNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDM 517
Query: 293 F--QKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLWYFLKSVSPGINESYLI---MIC 347
+ L KV+P R +++ Y + G +E+ + +Y +K + G++ + + +I
Sbjct: 518 IIPRMLHNKVKPNVRTC-GTIVNGYCEEGKMEEALRFFYRMKEL--GVHPNLFVFNSLIK 574
Query: 348 ALKRLNDMKGLIKCFKEWESRCERYDLRLVSTVISAYLS 386
+NDM G+ + E + D+ ST+++A+ S
Sbjct: 575 GFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSS 613
>AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2336649-2338481 REVERSE
LENGTH=534
Length = 534
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/448 (20%), Positives = 186/448 (41%), Gaps = 42/448 (9%)
Query: 39 EKEKTGLSASETLNQYMTEGRVAGKSELMRIVKELRKYRRFQDALEVMEWMEKRNSKFPR 98
EK G++ L +M +G ++ + LRK R + ALE+MEW+ +
Sbjct: 73 EKLPKGVTVGSALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALELMEWIIRERPYRLG 132
Query: 99 TYNHAVHLDLVCKTKGVVAAESYFNSLPPPAMDMYTYGTLLNCYCQELMADKALDLFDKM 158
++ L+ K GV E F +P + Y L+ + + AL+ KM
Sbjct: 133 ELEYSYLLEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKM 192
Query: 159 NELGYVTS-LNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDL 217
ELGY TS L +N L+ G+ + + + MK TYH M A +++
Sbjct: 193 RELGYRTSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNI 252
Query: 218 DEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPREAYLA 277
D V + F+ MK + E +Y LA+ + A + AE+ ++E+ +
Sbjct: 253 DGVLKAFDGMKKAGVEPNE-VSYCILAMAHAVARLYTVAEAYTEEIEKSI---------- 301
Query: 278 AIYVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLWYFLKSVSPG 337
G+ + L+ L+ LY + G +++ + W ++
Sbjct: 302 -----------TGDNWSTLD------------ILMILYGRLGKEKELARTWNVIRGFHHV 338
Query: 338 INESYLIMICALKRLNDMKGLIKCFKEWESRCERYDLRLVSTVISAYLSEDMGEEAALVF 397
++SYL+ A R+ ++ + + E ++ + ++++S Y + + E+A VF
Sbjct: 339 RSKSYLLATEAFARVGNLDRAEELWLEMKNVKGLKETEQFNSLLSVYCKDGLIEKAIGVF 398
Query: 398 KEAMKKSKGPFFKIRERFMVFFLEKRQL-DGAVSHLEAAL----SEVVGDEWRPFPHVVR 452
+E P I R + K +L A+ ++E L S+ +G P+
Sbjct: 399 REMTGNGFKP-NSITYRHLALGCAKAKLMKEALKNIEMGLNLKTSKSIGSS-TPWLETTL 456
Query: 453 AFVKYYKEETDLDGVDELSKILKTHNFD 480
+ ++ + E+ D++ ++L + +K ++
Sbjct: 457 SIIECFAEKGDVENSEKLFEEVKNAKYN 484
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 156/345 (45%), Gaps = 34/345 (9%)
Query: 82 ALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAM--DMYTYGTLL 139
A+E++ ME+RN K +++ +D +CK + A + FN + D+ TY TL+
Sbjct: 247 AMELLRKMEERNIKLD-AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305
Query: 140 NCYCQELMADKALDLF-DKMNELGYVTSLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIP 198
+C D L D + + F+ L+ F+K G+ + QL+ EM QR I
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Query: 199 MSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAES 258
+ TY++ ++ + N L+E ++ + M + D + T++ L Y KA + +
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDP-DIMTFNILINGYCKANRIDDGLE 424
Query: 259 MLRKLERKVKPRPREAY--LAAIYVKDNKFKKAGEMFQKL-EQKVRPRPREAYHCLISLY 315
+ R++ + Y L + + K + A ++FQ++ ++VRP +Y L+
Sbjct: 425 LFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDI-VSYKILLDGL 483
Query: 316 AKTGNLEKVYKLWYFLKS----VSPGINESYLIMI---CALKRLNDMKGLIKCFKEWESR 368
G LEK +++ ++ + GI Y+I+I C +++D W+
Sbjct: 484 CDNGELEKALEIFGKIEKSKMELDIGI---YMIIIHGMCNASKVDD---------AWDLF 531
Query: 369 CE------RYDLRLVSTVISAYLSEDMGEEAALVFKEAMKKSKGP 407
C + D R + +IS +D +A ++F++ ++ P
Sbjct: 532 CSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAP 576
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/354 (19%), Positives = 138/354 (38%), Gaps = 77/354 (21%)
Query: 129 AMDMYTYGTLLNCYCQ-----------------------------------ELMADKALD 153
A +YT ++NC+C+ E +AL+
Sbjct: 120 AHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALE 179
Query: 154 LFDKMNELGY----------VTSLNFNN--------------------------LMTLFM 177
L D+M E+G+ V L N ++ +
Sbjct: 180 LVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMC 239
Query: 178 KLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEW 237
K GQ +L+ +M++RNI + A Y ++ LD +F +M+++ K +
Sbjct: 240 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF-KADI 298
Query: 238 QTYSNLAVIYVKAEQFEKAESMLRK-LERKVKPRPRE-AYLAAIYVKDNKFKKAGEMFQK 295
TY+ L + A +++ +LR ++RK+ P + L +VK+ K ++A ++ ++
Sbjct: 299 ITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKE 358
Query: 296 LEQKVRPRPREAYHCLISLYAKTGNLEKVYKLWYFL--KSVSPGINESYLIMICALKRLN 353
+ Q+ Y+ LI + K LE+ ++ + K P I ++ I+I + N
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDI-MTFNILINGYCKAN 417
Query: 354 DMKGLIKCFKEWESRCERYDLRLVSTVISAYLSEDMGEEAALVFKEAMKKSKGP 407
+ ++ F+E R + +T++ + E A +F+E + + P
Sbjct: 418 RIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRP 471
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 121/265 (45%), Gaps = 14/265 (5%)
Query: 143 CQEL-MADKALDLFDKMNELGYVTSLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSA 201
C +L + +A +F+ + E G ++F +M L+ +G + ++ +EM++ +
Sbjct: 700 CADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDC 759
Query: 202 FTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLR 261
+++ M YAA L E +F +M VE + ++W T+ L + K +A S L+
Sbjct: 760 TSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQ 819
Query: 262 KLERKVKPRPREAYLAAIYVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNL 321
+ KP A A ++ + A E Q+L PR AY+ +I Y+ +G++
Sbjct: 820 TAYNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDI 879
Query: 322 EKVYKLWYFL--KSVSPGI-NESYLIMICALKRLNDMKGLIKCFKEWESRCERYDLR--- 375
+ K + + K + P I ++YL+ I G+++ K SR +L
Sbjct: 880 DMALKAYMRMQEKGLEPDIVTQAYLVGIYG------KAGMVEGVKRVHSRLTFGELEPSQ 933
Query: 376 -LVSTVISAYLSEDMGEEAALVFKE 399
L V AY+S + + A +V KE
Sbjct: 934 SLFKAVRDAYVSANRQDLADVVKKE 958
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 154/346 (44%), Gaps = 10/346 (2%)
Query: 69 IVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPP 128
+V L K AL +++ MEK + + +D +C K V A + F +
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIE-ADVVIYTTIIDALCNYKNVNDALNLFTEMDNK 284
Query: 129 AM--DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTSL-NFNNLMTLFMKLGQPLKV 185
+ ++ TY +L+ C C A L M E ++ F+ L+ F+K G+ ++
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 344
Query: 186 HQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAV 245
+L DEM +R+I FTY + +N + + LDE + +FE M +D TY+ L
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP-NVVTYNTLIK 403
Query: 246 IYVKAEQFEKAESMLRKLERKVKPRPREAYLAAI--YVKDNKFKKAGEMFQKLEQKVRPR 303
+ KA++ E+ + R++ ++ Y I + A ++F+K+ P
Sbjct: 404 GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP 463
Query: 304 PREAYHCLISLYAKTGNLEKVYKLWYFLK--SVSPGINESYLIMICALKRLNDMKGLIKC 361
Y L+ K G LEK ++ +L+ + P I +Y IMI + + ++
Sbjct: 464 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI-YTYNIMIEGMCKAGKVEDGWDL 522
Query: 362 FKEWESRCERYDLRLVSTVISAYLSEDMGEEAALVFKEAMKKSKGP 407
F + + ++ + +T+IS + + + EEA +F+E + P
Sbjct: 523 FCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP 568
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 147/315 (46%), Gaps = 13/315 (4%)
Query: 102 HAVHLDLVCKTKGVVAAESYFNSLPPPAM--DMYTYGTLLNCYCQ-ELMADKALDLFDKM 158
++ +D +CK + A + F + + ++ TY +L++C C E +D + L D +
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 159 NELGYVTSLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLD 218
+ FN L+ F+K G+ ++ +L DEM +R+I FTY + +N + + LD
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 219 EVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPREAYLAA 278
E + +FE M +D TY+ L + KA++ ++ + R++ ++ Y
Sbjct: 383 EAKHMFELMISKDCFP-NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441
Query: 279 I--YVKDNKFKKAGEMF-QKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLWYFLK--S 333
I + + A +F Q + V P Y+ L+ K G LEK ++ +L+
Sbjct: 442 IHGFFQARDCDNAQMVFKQMVSDGVHPNIM-TYNTLLDGLCKNGKLEKAMVVFEYLQRSK 500
Query: 334 VSPGINESYLIMICALKRLNDMKGLIKCFKEWESRCERYDLRLVSTVISAYLSEDMGEEA 393
+ P I +Y IMI + + ++ F + + D+ + +T+IS + + + EEA
Sbjct: 501 MEPTI-YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEA 559
Query: 394 ALVFKEAMKKSKGPF 408
+F++ + GP
Sbjct: 560 DALFRKM--REDGPL 572
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 81/394 (20%), Positives = 159/394 (40%), Gaps = 24/394 (6%)
Query: 65 ELMRIVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNS 124
E +++ + K ++F + + E M++ Y + + ++ C+ + A +
Sbjct: 87 EFNKLLSAIAKMKKFDLVISLGEKMQRLGISH-NLYTYNILINCFCRRSQISLALALLGK 145
Query: 125 LPPPAMD--MYTYGTLLNCYCQELMADKALDLFDKMNELGY-VTSLNFNNLMTLFMKLGQ 181
+ + + T +LLN YC A+ L D+M E+GY ++ F L+ +
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 182 PLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQT-- 239
+ LVD M QR + TY +N D+D + KM+ KIE
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA---KIEANVVI 262
Query: 240 YSNLAVIYVKAEQFEKAESMLRKLERK-VKPRPRE-AYLAAIYVKDNKFKKAGEMFQK-L 296
YS + K + A ++ ++E K V+P + L + ++ A + +
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 297 EQKVRPRPREAYHCLISLYAKTGNLEKVYKLW--YFLKSVSPGI--NESYLIMICALKRL 352
E+K+ P ++ LI + K G L + KL+ +S+ P I S + C RL
Sbjct: 323 ERKINPNV-VTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 381
Query: 353 NDMKGLIKCFKEWESRCERYDLRLVSTVISAYLSEDMGEEAALVFKEAMKKSKGPFFKIR 412
++ K + F+ S+ ++ +T+I+ + +E +F+E ++
Sbjct: 382 DEAKHM---FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTY 438
Query: 413 ERFMVFFLEKRQLDGAVSHLEAALSEVVGDEWRP 446
+ F + R D A + ++V D P
Sbjct: 439 TTLIHGFFQARDCDNA----QMVFKQMVSDGVHP 468
>AT1G43010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:16153609-16154468 FORWARD
LENGTH=257
Length = 257
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 107/234 (45%), Gaps = 13/234 (5%)
Query: 27 PAKKQGLYQRLSEKEKTGLSASETLNQYMTEGRVAGKSELMRIVKELRKYRRFQDALEVM 86
PA Q L R+ S L Q+ +G S L ++K L + F ALE
Sbjct: 32 PAANQTLPSRIKTDINQKASIIPLLEQWRKQGYEVNPSHLRGLIKNLSDCKNFTTALEAS 91
Query: 87 EWMEKRN--SKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAMDMYTYGTLLNCYCQ 144
+WM K + FP + A L LV G+ AE F ++P D Y LL+ Y +
Sbjct: 92 KWMFKHSVFDNFPE--DCAAQLHLVNTVLGLEEAEKMFKNIPEKMRD---YSVLLSSYTK 146
Query: 145 EL-MADKALDLFDKMNELGY-VTSLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAF 202
+ DKA F KM ELG+ + FN+++ L+ +L + V +L+ ++K+ N+ + +
Sbjct: 147 PVRTVDKAEATFKKMRELGFLLKPYLFNSMICLYGQLQRLDMVEKLLYKLKKNNMEVGSL 206
Query: 203 TYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKA 256
+ YA +N +++ + K +E +E T +A Y +A EKA
Sbjct: 207 KVNNVSRVYANINAMEKFKTWVSKEGIE----LERDTIVAMAKAYHRAGSIEKA 256
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 158/358 (44%), Gaps = 34/358 (9%)
Query: 69 IVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPP 128
+V L K AL +++ MEK + + + +D +CK K + A + F +
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTI-IDGLCKYKHMDDALNLFTEMDNK 287
Query: 129 AM--DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTSL-NFNNLMTLFMKLGQPLKV 185
+ D++TY +L++C C A L M E ++ F+ L+ F+K G+ ++
Sbjct: 288 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 347
Query: 186 HQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAV 245
+L DEM +R+I FTY + +N + + LDE + +FE M +D TYS L
Sbjct: 348 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP-NVVTYSTLIK 406
Query: 246 IYVKAEQFEKAESMLRKLERKVKPRPREAYLAAI--YVKDNKFKKAGEMF-QKLEQKVRP 302
+ KA++ E+ + R++ ++ Y I + + A +F Q + V P
Sbjct: 407 GFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP 466
Query: 303 RPREAYHCLISLYAKTGNLEKVYKLWYFLK--SVSPGINESYLIMI---CALKRLNDMKG 357
Y+ L+ K G L K ++ +L+ ++ P I +Y IMI C ++ D
Sbjct: 467 NIL-TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDI-YTYNIMIEGMCKAGKVED--- 521
Query: 358 LIKCFKEWESRCERYDLRLVS-------TVISAYLSEDMGEEAALVFKEAMKKSKGPF 408
WE C L+ VS T+IS + + EEA + K+ K GP
Sbjct: 522 ------GWELFCN-LSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKM--KEDGPL 570
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 117/283 (41%), Gaps = 9/283 (3%)
Query: 131 DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTSL-NFNNLMTLFMKLGQPLKVHQLV 189
D+YTY +NC+C+ AL + KM +LGY + ++L+ + + LV
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 190 DEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVK 249
D+M + FT+ ++ N E + ++M V+ + + TY + K
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQM-VQRGCQPDLVTYGTVVNGLCK 235
Query: 250 AEQFEKAESMLRKLERKVKPRPREAYLAAI--YVKDNKFKKAGEMFQKLEQK-VRPRPRE 306
+ A S+L+K+E+ Y I K A +F +++ K +RP
Sbjct: 236 RGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF- 294
Query: 307 AYHCLISLYAKTGNLEKVYKLWYFL--KSVSPGINESYLIMICALKRLNDMKGLIKCFKE 364
Y LIS G +L + + ++P + ++ +I A + + K + E
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNV-VTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 365 WESRCERYDLRLVSTVISAYLSEDMGEEAALVFKEAMKKSKGP 407
R D+ S++I+ + D +EA +F+ + K P
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 396
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 124/275 (45%), Gaps = 6/275 (2%)
Query: 128 PAMDMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTSLN-FNNLMTLFMKLGQPLKVH 186
PA YT TL+ + +D L LF +M ELGY +++ F L+ F K G+
Sbjct: 166 PAFSAYT--TLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSAL 223
Query: 187 QLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVI 246
L+DEMK ++ Y+ ++S+ + +D + F +++ K + TY+++ +
Sbjct: 224 SLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGL-KPDEVTYTSMIGV 282
Query: 247 YVKAEQFEKAESMLRKLERKVKPRPREAYLAAI--YVKDNKFKKAGEMFQKLEQKVRPRP 304
KA + ++A M LE+ + AY I Y KF +A + ++ K
Sbjct: 283 LCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPS 342
Query: 305 REAYHCLISLYAKTGNLEKVYKLWYFLKSVSPGINESYLIMICALKRLNDMKGLIKCFKE 364
AY+C+++ K G +++ K++ +K + +Y I+I L R + +
Sbjct: 343 VIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDS 402
Query: 365 WESRCERYDLRLVSTVISAYLSEDMGEEAALVFKE 399
+ ++R V+ ++ +EA +F+E
Sbjct: 403 MQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEE 437
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/346 (19%), Positives = 163/346 (47%), Gaps = 11/346 (3%)
Query: 69 IVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPP 128
I+ LRK + +AL+V E M+K + TYN + +D++C+ + A +S+
Sbjct: 349 ILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYN--ILIDMLCRAGKLDTAFELRDSMQKA 406
Query: 129 AM--DMYTYGTLLNCYCQELMADKALDLFDKMN-ELGYVTSLNFNNLMTLFMKLGQPLKV 185
+ ++ T +++ C+ D+A +F++M+ ++ + F +L+ K+G+
Sbjct: 407 GLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDA 466
Query: 186 HQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAV 245
+++ ++M + ++ Y + + ++ ++ +I++ M + + Q +
Sbjct: 467 YKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM-INQNCSPDLQLLNTYMD 525
Query: 246 IYVKAEQFEKAESMLRKLE-RKVKPRPRE-AYLAAIYVKDNKFKKAGEMFQKLEQKVRPR 303
KA + EK +M +++ R+ P R + L +K + E+F ++++
Sbjct: 526 CMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVL 585
Query: 304 PREAYHCLISLYAKTGNLEKVYKLWYFLKS--VSPGINESYLIMICALKRLNDMKGLIKC 361
AY+ +I + K G + K Y+L +K+ P + +Y +I L +++ +
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV-VTYGSVIDGLAKIDRLDEAYML 644
Query: 362 FKEWESRCERYDLRLVSTVISAYLSEDMGEEAALVFKEAMKKSKGP 407
F+E +S+ ++ + S++I + +EA L+ +E M+K P
Sbjct: 645 FEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTP 690
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 128/283 (45%), Gaps = 15/283 (5%)
Query: 131 DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTSLN-FNNLMTLFMKLGQPLKVHQLV 189
D +Y L++ + A++ +LF M E G V +N ++ F K G+ K +QL+
Sbjct: 551 DARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLL 610
Query: 190 DEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQT--YSNLAVIY 247
+EMK + + TY + ++ A ++ LDE +FE+ K + +IE YS+L +
Sbjct: 611 EEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK---RIELNVVIYSSLIDGF 667
Query: 248 VKAEQFEKAESMLRKLERK-VKPR--PREAYLAAIYVKDNKFKKAGEMFQKL-EQKVRPR 303
K + ++A +L +L +K + P + L A+ VK + +A FQ + E K P
Sbjct: 668 GKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDAL-VKAEEINEALVCFQSMKELKCTPN 726
Query: 304 PREAYHCLISLYAKTGNLEKVYKLWYFL--KSVSPGINESYLIMICALKRLNDMKGLIKC 361
+ Y LI+ K K + W + + + P SY MI L + ++
Sbjct: 727 -QVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPS-TISYTTMISGLAKAGNIAEAGAL 784
Query: 362 FKEWESRCERYDLRLVSTVISAYLSEDMGEEAALVFKEAMKKS 404
F +++ D + +I + + +A +F+E ++
Sbjct: 785 FDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRG 827
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 120/266 (45%), Gaps = 10/266 (3%)
Query: 69 IVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPP 128
+++ K R AL +++ M K +S + V +D K V A +F+ +
Sbjct: 209 LIRGFAKEGRVDSALSLLDEM-KSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEAN 267
Query: 129 AM--DMYTYGTLLNCYCQELMADKALDLFDKMNELGYV-TSLNFNNLMTLFMKLGQPLKV 185
+ D TY +++ C+ D+A+++F+ + + V + +N ++ + G+ +
Sbjct: 268 GLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEA 327
Query: 186 HQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAV 245
+ L++ + + S Y+ + + +DE ++FE+MK + + TY+ L
Sbjct: 328 YSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNL--STYNILID 385
Query: 246 IYVKAEQFEKAESMLRKLERK-VKPRPREA-YLAAIYVKDNKFKKAGEMFQKLEQKVRPR 303
+ +A + + A + +++ + P R + K K +A MF++++ KV
Sbjct: 386 MLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV-CT 444
Query: 304 PREAYHC-LISLYAKTGNLEKVYKLW 328
P E C LI K G ++ YK++
Sbjct: 445 PDEITFCSLIDGLGKVGRVDDAYKVY 470
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 141/321 (43%), Gaps = 15/321 (4%)
Query: 97 PRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAM--DMYTYGTLLNCYCQELMADKALDL 154
P + +D CK + A+ F + + + TY L+N + + + ++
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEM 255
Query: 155 FDKMNELGYVTSL-NFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAA 213
++KM E G +L +N +M K G+ Q+ DEM++R + + TY+ +
Sbjct: 256 YEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCR 315
Query: 214 LNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPRE 273
L+E ++ ++MK D TY+ L + + KA S+ R L+ +
Sbjct: 316 EMKLNEANKVVDQMK-SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLV 374
Query: 274 AY--LAAIYVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLWYFL 331
Y L + + + A +M +++E++ + Y LI +A++ N+EK +L +
Sbjct: 375 TYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSM 434
Query: 332 KSVS--PGINESYLIMI---CALKRLNDMKGLIKCFKEWESRCERYDLRLVSTVISAYLS 386
+ + P ++ +Y ++I C ++N+ L K E CE ++ + +T+I Y
Sbjct: 435 EELGLVPDVH-TYSVLIHGFCIKGQMNEASRLFKSM--VEKNCEPNEV-IYNTMILGYCK 490
Query: 387 EDMGEEAALVFKEAMKKSKGP 407
E A + KE +K P
Sbjct: 491 EGSSYRALKLLKEMEEKELAP 511
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 142/318 (44%), Gaps = 9/318 (2%)
Query: 97 PRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAM--DMYTYGTLLNCYCQELMADKALDL 154
P + +D +CK K + A + F + + ++ TY +L++C C A L
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 155 FDKMNELGYVTSL-NFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAA 213
M E + F+ L+ F+K G+ ++ +L DEM +R+I S TY + +N +
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 214 LNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPRE 273
+ LDE +++FE M V + TY+ L + K ++ E+ + R++ ++
Sbjct: 374 HDRLDEAKQMFEFM-VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 432
Query: 274 AY--LAAIYVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLWYFL 331
Y L + A E+F+++ P Y+ L+ K G LEK ++ +L
Sbjct: 433 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 332 K--SVSPGINESYLIMICALKRLNDMKGLIKCFKEWESRCERYDLRLVSTVISAYLSEDM 389
+ + P I +Y IMI + + ++ F + + D+ +T+IS + +
Sbjct: 493 QRSKMEPTI-YTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 551
Query: 390 GEEAALVFKEAMKKSKGP 407
EEA +FKE + P
Sbjct: 552 KEEADALFKEMKEDGTLP 569
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 146/353 (41%), Gaps = 22/353 (6%)
Query: 65 ELMRIVKELRKYRRFQDALEVMEWMEKRNSKFPRT-YNHAVHLDLVCKTKGVVAAESYFN 123
E +++ + K +F + + E M+ N P Y +++ ++ C+ + A +
Sbjct: 83 EFSKLLSAIAKMNKFDVVISLGEQMQ--NLGIPHNHYTYSILINCFCRRSQLPLALAVLG 140
Query: 124 SLPPPAM--DMYTYGTLLNCYCQELMADKALDLFDKMNELGY-VTSLNFNNLMTLFMKLG 180
+ ++ T +LLN YC +A+ L D+M GY ++ FN L+
Sbjct: 141 KMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHN 200
Query: 181 QPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQT- 239
+ + L+D M + TY +N D D + KM ++ K+E
Sbjct: 201 KASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM---EQGKLEPGVL 257
Query: 240 -YSNLAVIYVKAEQFEKAESMLRKLERK-VKPRPRE-AYLAAIYVKDNKFKKAGEMFQK- 295
Y+ + K + + A ++ +++E K ++P + L + ++ A +
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 296 LEQKVRPRPREAYHCLISLYAKTGNLEKVYKLW--YFLKSVSPGI--NESYLIMICALKR 351
+E+K+ P + LI + K G L + KL+ +S+ P I S + C R
Sbjct: 318 IERKINPDVF-TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376
Query: 352 LNDMKGLIKCFKEWESRCERYDLRLVSTVISAYLSEDMGEEAALVFKEAMKKS 404
L++ K + F+ S+ D+ +T+I + EE VF+E ++
Sbjct: 377 LDEAKQM---FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 426
>AT3G11380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3564079-3565779 FORWARD
LENGTH=541
Length = 541
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 86/161 (53%), Gaps = 3/161 (1%)
Query: 66 LMRIVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSL 125
L ++K LR + ALE WM ++ + ++A L L K G+ AE++F S
Sbjct: 381 LRDLIKNLRDSNQLSKALEASTWMCQKKVFNLFSEDYATRLHLTEKVLGLEEAENFFESS 440
Query: 126 PPPAMDMYT-YGTLLNCYCQEL-MADKALDLFDKMNELGYVTSLN-FNNLMTLFMKLGQP 182
P M Y+ Y TLL+CY + KA +F+KM ELG + L+ FN+L++L+ G+
Sbjct: 441 IPENMKDYSVYDTLLSCYARSSNTQSKAEAVFEKMRELGLQSKLSPFNSLISLYSGQGKL 500
Query: 183 LKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERI 223
V+ L+ +MK +NI T + + + A + +D +E++
Sbjct: 501 SVVNILLCDMKHKNIEPDIVTRNNVLRANAYILAIDSMEKV 541
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 135/328 (41%), Gaps = 64/328 (19%)
Query: 64 SELMRIVKELRKYRRFQDALEVMEWM-EKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYF 122
S L IV++LR R + ALEV +WM E++ P ++ HL K + AE +F
Sbjct: 76 SLLRGIVEKLRSSNRPRQALEVSDWMVEQKMYNLPEDFSARFHL--TEKVLNLEEAEKFF 133
Query: 123 NSLPPPAMDMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTSLNFNNLMTLFMKLGQP 182
S+P Y +LL Y ++ +KAL K +
Sbjct: 134 ESIPENMRFESMYNSLLRSYARQ-SGEKAL-------------------------KKAES 167
Query: 183 LKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSN 242
+ + R P Y++ + Y++L + D+V+ I +MK E+ +++ T +N
Sbjct: 168 VFKKMKKLGLLLRPSP-----YNSMTSLYSSLGNRDKVDEILREMK-ENNVELDNVTVNN 221
Query: 243 LAVIYVKAEQFEKAESMLRKLERKVKPRPREAYLAAIYVKDNKFKKAGEMFQKLEQKVRP 302
+Y A ++ + D KF + +L+
Sbjct: 222 ALRVY--------------------------AAVSDVATMD-KFLADRKEITRLDGLTML 254
Query: 303 RPREAYHCLISLYAKTGNLEKVYKLWYFLKSVSPGINESYLIMICALKRLNDMKGLIKC- 361
+AY L+SLY + G +E V+++W K+ NE + +I +L +L D KG K
Sbjct: 255 AMAKAYE-LMSLYGEAGEIEDVHRVWDKYKATRQKDNEEFRTLIGSLLKLGDTKGAEKIY 313
Query: 362 FKEWESRCERYDLRLVSTVISAYLSEDM 389
+ EWE +D R+ ++S Y + M
Sbjct: 314 YNEWECSGLEFDNRIPDMLVSGYREKGM 341
>AT1G28000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9756674-9757947 REVERSE
LENGTH=388
Length = 388
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 111/230 (48%), Gaps = 8/230 (3%)
Query: 51 LNQYMTEGRVAGKSELMRIVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVC 110
L++++ G+ + L ++ L + +RF AL+V EW+ KR T + A L LV
Sbjct: 53 LDEWLKRGKDLNPAVLRGLINSLCESQRFNHALQVSEWITKRGIFDLSTEDFASRLCLVE 112
Query: 111 KTKGVVAAESYFNSLPPPAMDMYTYGTLLNCYC----QELMADKALDLFDKMNELGYVTS 166
+ G+ AE +F S+P D + TLL+ Y A+ N L +
Sbjct: 113 ISTGLKEAEKFFKSIPENMRDDSVHTTLLSLYTISKKTRHEAEATYQTMRVQNML--LKP 170
Query: 167 LNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSA-FTYHAWMNSYAALNDLDEVERIFE 225
+ +++ L+ LG+ + +++ +MK+ + T + + +YA+L D++ +E
Sbjct: 171 YPYYSMIYLYALLGEKNMIDEILRQMKENGVEHDKNLTANNVLKAYASLPDVEAMEMFLM 230
Query: 226 KMKVEDED-KIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPREA 274
++VE+ + WQT ++A Y+K KA MLR+ E V + +++
Sbjct: 231 GLEVEEPRFSLAWQTGISIAKAYLKGGSSRKAVEMLRRTELVVDTKSKDS 280
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 117/253 (46%), Gaps = 9/253 (3%)
Query: 82 ALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAM--DMYTYGTLL 139
AL+++ ME+RN K + ++ +D +C+ + AA S F + + + TY +L+
Sbjct: 212 ALDLLRKMEERNVK-ADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 140 NCYCQELM-ADKALDLFDKMNELGYVTSLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIP 198
C+ D AL L D ++ + FN L+ +F+K G+ + ++L EM R I
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
Query: 199 MSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAES 258
+ TY+ M+ Y N L E + + M V ++ + T+++L Y ++ +
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLM-VRNKCSPDIVTFTSLIKGYCMVKRVDDGMK 389
Query: 259 MLRKLERK--VKPRPREAYLAAIYVKDNKFKKAGEMFQKL-EQKVRPRPREAYHCLISLY 315
+ R + ++ V + L + + K K A E+FQ++ V P Y L+
Sbjct: 390 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM-TYGILLDGL 448
Query: 316 AKTGNLEKVYKLW 328
G LEK +++
Sbjct: 449 CDNGKLEKALEIF 461
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 145/340 (42%), Gaps = 16/340 (4%)
Query: 82 ALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAM--DMYTYGTLL 139
LE+ M K + +P + + V +D +CK K + AE F+ + + + TY TL+
Sbjct: 198 GLELFNRM-KHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLI 256
Query: 140 NCYCQELMADKALDLFDKMNELGYVTSL-NFNNLMTLFMKLGQPLKVHQLVDEMKQRNIP 198
+ YC+ +K+ + ++M SL FN L+ K G ++ EMK
Sbjct: 257 DGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFV 316
Query: 199 MSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAES 258
AFT+ + Y++ + ++E V+ K+ T S L K + EKAE
Sbjct: 317 PDAFTFSILFDGYSSNEKAEAALGVYET-AVDSGVKMNAYTCSILLNALCKEGKIEKAEE 375
Query: 259 ML-RKLERKVKPRPREAYLAAI--YVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLY 315
+L R++ + + P Y I Y + A + +E++ AY+CLI +
Sbjct: 376 ILGREMAKGLVPN-EVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRF 434
Query: 316 AKTGNLE----KVYKLWYFLKSVSPGINESYLIMICALKRLNDMKGLIKCFKEWESRCER 371
+ G +E +V K+ LK VSP + E+Y I+I R + KE E
Sbjct: 435 CELGEMENAEKEVNKMK--LKGVSPSV-ETYNILIGGYGRKYEFDKCFDILKEMEDNGTM 491
Query: 372 YDLRLVSTVISAYLSEDMGEEAALVFKEAMKKSKGPFFKI 411
++ T+I+ EA +V ++ + P +I
Sbjct: 492 PNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRI 531
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 117/258 (45%), Gaps = 9/258 (3%)
Query: 106 LDLVCKTKGVVAAESYFNSLPPP-AMDMYTYGTLLNCYCQELMADKALDLFDKMNELGYV 164
LD++CK+K V A F +L ++D TY +LN +C KAL++ +M E G
Sbjct: 168 LDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGIN 227
Query: 165 TSL-NFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERI 223
+L +N ++ F + GQ + EMK+R+ + TY ++ + ++ +
Sbjct: 228 PNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNV 287
Query: 224 FEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPREAYLAAI--YV 281
F++M + + TY+ + + K + E A M ++ R+ Y I
Sbjct: 288 FDEM-IREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLF 346
Query: 282 KDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLWYFLKSVSPGIN-E 340
+F + E+ Q++E + + Y+ +I Y++ +EK L+ + S N +
Sbjct: 347 HAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLD 406
Query: 341 SYLIMICAL---KRLNDM 355
+Y I+I + KR DM
Sbjct: 407 TYNILISGMFVRKRSEDM 424
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 141/312 (45%), Gaps = 15/312 (4%)
Query: 106 LDLVCKTKGVVAAESYFNSLPPPAM--DMYTYGTLLNCYCQELMADKALDLFDKMNELGY 163
+D +CK + V A + F + + ++ TY +L++C C A L M E
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Query: 164 VTSL-NFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVER 222
+L FN L+ F+K G+ ++ +L D+M +R+I FTY++ +N + + LD+ ++
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 311
Query: 223 IFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPREAYLAAI--Y 280
+FE M V + + TY+ L + K+++ E + R++ + Y I
Sbjct: 312 MFEFM-VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 370
Query: 281 VKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLWYFLKSVSPGIN- 339
D A ++F+++ P Y L+ G LEK +++ +++ ++
Sbjct: 371 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 430
Query: 340 ESYLIMI---CALKRLNDMKGLIKCFKEWESRCERYDLRLVSTVISAYLSEDMGEEAALV 396
Y MI C +++D L F + + ++ +T+IS S+ + +EA +
Sbjct: 431 YIYTTMIEGMCKAGKVDDGWDL---FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 487
Query: 397 FKEAMKKSKGPF 408
K+ K GP
Sbjct: 488 LKKM--KEDGPL 497
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 81/388 (20%), Positives = 152/388 (39%), Gaps = 51/388 (13%)
Query: 65 ELMRIVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNS 124
E +++ + K ++F + + E M++ Y + + ++ C+ + A +
Sbjct: 12 EFNKLLSAIAKMKKFDLVISLGEKMQRLGISH-NLYTYNILINCFCRRSQISLALALLGK 70
Query: 125 LPPPAMD--MYTYGTLLNCYCQELMADKALDLFDKMNELGY-VTSLNFNNLMTLFMKLGQ 181
+ + + T +LLN YC A+ L D+M E+GY ++ F L+ +
Sbjct: 71 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 130
Query: 182 PLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKM---KVEDEDKI--- 235
+ LVD M QR + TY +N D+D + KM K+E + I
Sbjct: 131 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNT 190
Query: 236 ----------------------------EWQTYSNLAVIYVKAEQFEKAESMLRK-LERK 266
TYS+L ++ A +L +E+K
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 250
Query: 267 VKPR--PREAYLAAIYVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKV 324
+ P A + A +VK+ KF +A ++ + ++ Y+ LI+ + L+K
Sbjct: 251 INPNLVTFNALIDA-FVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA 309
Query: 325 YKLWYFL--KSVSPGINESYLIMI---CALKRLNDMKGLIKCFKEWESRCERYDLRLVST 379
+++ F+ K P + ++Y +I C KR+ D L F+E R D +T
Sbjct: 310 KQMFEFMVSKDCFPDL-DTYNTLIKGFCKSKRVEDGTEL---FREMSHRGLVGDTVTYTT 365
Query: 380 VISAYLSEDMGEEAALVFKEAMKKSKGP 407
+I + + A VFK+ + P
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPP 393
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 147/351 (41%), Gaps = 23/351 (6%)
Query: 69 IVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPP 128
+V L K AL ++ ME K + + +D +CK + V A F +
Sbjct: 229 VVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTI-IDSLCKYRHVEVAVDLFTEMETK 287
Query: 129 AM--DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTSL-NFNNLMTLFMKLGQPLKV 185
+ ++ TY +L+NC C A L M E ++ FN L+ F K G+ ++
Sbjct: 288 GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEA 347
Query: 186 HQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAV 245
+L +EM QR+I TY+ +N + N LDE +++F K V + QTY+ L
Sbjct: 348 EKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMF-KFMVSKDCLPNIQTYNTLIN 406
Query: 246 IYVKAEQFEKAESMLRKLERKVKPRPREAYLAAI--YVKDNKFKKAGEMFQKLEQKVRPR 303
+ K ++ E + R++ ++ Y I + + A +F+++ P
Sbjct: 407 GFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPT 466
Query: 304 PREAYHCLISLYAKTGNLEKVYKLWYFLKSVSPGINE-SYLIMICALKRLNDMKGLIKCF 362
Y L+ G L+ ++ +L+ +N Y MI +G+ K
Sbjct: 467 DIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMI---------EGMCKAG 517
Query: 363 K---EWESRCE---RYDLRLVSTVISAYLSEDMGEEAALVFKEAMKKSKGP 407
K W+ C + D+ +T+IS S+ + +EA +F++ + P
Sbjct: 518 KVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLP 568
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 141/312 (45%), Gaps = 15/312 (4%)
Query: 106 LDLVCKTKGVVAAESYFNSLPPPAM--DMYTYGTLLNCYCQELMADKALDLFDKMNELGY 163
+D +CK + V A + F + + ++ TY +L++C C A L M E
Sbjct: 267 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326
Query: 164 VTSL-NFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVER 222
+L FN L+ F+K G+ ++ +L D+M +R+I FTY++ +N + + LD+ ++
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 386
Query: 223 IFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPREAYLAAI--Y 280
+FE M V + + TY+ L + K+++ E + R++ + Y I
Sbjct: 387 MFEFM-VSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445
Query: 281 VKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLWYFLKSVSPGIN- 339
D A ++F+++ P Y L+ G LEK +++ +++ ++
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505
Query: 340 ESYLIMI---CALKRLNDMKGLIKCFKEWESRCERYDLRLVSTVISAYLSEDMGEEAALV 396
Y MI C +++D L F + + ++ +T+IS S+ + +EA +
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDL---FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 562
Query: 397 FKEAMKKSKGPF 408
K+ K GP
Sbjct: 563 LKKM--KEDGPL 572
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/388 (20%), Positives = 151/388 (38%), Gaps = 51/388 (13%)
Query: 65 ELMRIVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNS 124
E +++ + K ++F + + E M+ R Y + + ++ C+ + A +
Sbjct: 87 EFNKLLSAIAKMKKFDVVISLGEKMQ-RLEIVHGLYTYNILINCFCRRSQISLALALLGK 145
Query: 125 LPPPAMD--MYTYGTLLNCYCQELMADKALDLFDKMNELGY-VTSLNFNNLMTLFMKLGQ 181
+ + + T +LLN YC A+ L D+M E+GY ++ F L+ +
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 182 PLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKM---KVEDEDKI--- 235
+ LVD M QR + TY +N D D + KM K+E + I
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 265
Query: 236 ----------------------------EWQTYSNLAVIYVKAEQFEKAESMLRK-LERK 266
TYS+L ++ A +L +E+K
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325
Query: 267 VKPR--PREAYLAAIYVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKV 324
+ P A + A +VK+ KF +A +++ + ++ Y+ L++ + L+K
Sbjct: 326 INPNLVTFNALIDA-FVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 384
Query: 325 YKLWYFL--KSVSPGINESYLIMI---CALKRLNDMKGLIKCFKEWESRCERYDLRLVST 379
+++ F+ K P + +Y +I C KR+ D L F+E R D +T
Sbjct: 385 KQMFEFMVSKDCFPDV-VTYNTLIKGFCKSKRVEDGTEL---FREMSHRGLVGDTVTYTT 440
Query: 380 VISAYLSEDMGEEAALVFKEAMKKSKGP 407
+I + + A VFK+ + P
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPP 468
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 154/347 (44%), Gaps = 12/347 (3%)
Query: 69 IVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPP 128
+V L K AL +++ ME+ + P + +D +C K V A + F +
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEQGKIE-PGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285
Query: 129 AM--DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTSL-NFNNLMTLFMKLGQPLKV 185
+ ++ TY +L+ C C A L M E ++ F+ L+ F+K G+ ++
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 345
Query: 186 HQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAV 245
+L DEM +R+I FTY + +N + + LDE + +FE M +D TY+ L
Sbjct: 346 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP-NVVTYNTLIK 404
Query: 246 IYVKAEQFEKAESMLRKLERKVKPRPREAYLAAI--YVKDNKFKKAGEMFQKLEQKVRPR 303
+ KA++ ++ + R++ ++ Y I + + + A +F+++
Sbjct: 405 GFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLP 464
Query: 304 PREAYHCLISLYAKTGNLEKVYKLWYFLK--SVSPGINESYLIMICALKRLNDMKGLIKC 361
Y L+ G +E ++ +L+ + P I +Y IMI + + ++
Sbjct: 465 DIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDI-YTYNIMIEGMCKAGKVEDGWDL 523
Query: 362 FKEWESRCERYDLRLVSTVISAYLSEDMGEEAALVFKEAMKKSKGPF 408
F + + ++ +T++S + + + EEA +F+E K +GP
Sbjct: 524 FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREM--KEEGPL 568
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 127/303 (41%), Gaps = 11/303 (3%)
Query: 131 DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTSL-NFNNLMTLFMKLGQPLKVHQLV 189
++YTY L+NC+C+ AL + KM +LGY + N+L+ F + LV
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 190 DEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVK 249
+M + +FT++ ++ N E + ++M V+ + TY + K
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQP-DLVTYGIVVNGLCK 233
Query: 250 AEQFEKAESMLRKLERKVKPRPREAYLAAIYVKDNKFKKAGE---MFQKLEQK-VRPRPR 305
+ A S+L+K+E+ K P I +K + +F +++ K +RP
Sbjct: 234 RGDIDLALSLLKKMEQG-KIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNV- 291
Query: 306 EAYHCLISLYAKTGNLEKVYKLWYFL--KSVSPGINESYLIMICALKRLNDMKGLIKCFK 363
Y+ LI G +L + + ++P + ++ +I A + + K +
Sbjct: 292 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV-VTFSALIDAFVKEGKLVEAEKLYD 350
Query: 364 EWESRCERYDLRLVSTVISAYLSEDMGEEAALVFKEAMKKSKGPFFKIRERFMVFFLEKR 423
E R D+ S++I+ + D +EA +F+ + K P + F + +
Sbjct: 351 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 410
Query: 424 QLD 426
++D
Sbjct: 411 RVD 413
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 149/345 (43%), Gaps = 57/345 (16%)
Query: 66 LMRIVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSL 125
++ I + L+ + AL + W +K+ P + V D + + + V +S F +
Sbjct: 172 MVHITQSLKIVKEVDAALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEM 231
Query: 126 PPPAMDMYTYGTL-LNCYCQELM----ADK---ALDLFDKMNELGY-VTSLNFNNLMTLF 176
D ++G L N Y Q + A+K A F K E G + + +NNLM LF
Sbjct: 232 ---VQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLF 288
Query: 177 MKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIE 236
+ G P K ++ + M++ + + TY + S A LD ++F++MK E + +
Sbjct: 289 LNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMK-ERKLRPS 347
Query: 237 WQTYSNLA-------------VIYVKAEQF-------------------EKAESMLRKLE 264
+ +S+L +Y++ + F K ++ LR +
Sbjct: 348 FSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWD 407
Query: 265 --RKVKPRPREAYLAAI---YVKDNKFKKAGEMFQKLEQK-VRPRPREAYHCLISLYAKT 318
+K RP I + K K + A +F+ +E+ P P Y CL+ ++A +
Sbjct: 408 EMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTP-STYSCLLEMHAGS 466
Query: 319 GNLEKVYKLWYFLKSVS--PGINESY--LIMICALKRLNDMKGLI 359
G ++ K++ + + PG++ SY L+ + A KRL D+ G I
Sbjct: 467 GQVDSAMKIYNSMTNAGLRPGLS-SYISLLTLLANKRLVDVAGKI 510
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 133/285 (46%), Gaps = 12/285 (4%)
Query: 129 AMDMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTS-LNFNNLMTLFMKLGQPLKVHQ 187
A D+++YG L+N + + KA +FD+M E G + + +N L+ F + G+ K +
Sbjct: 624 APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKE 683
Query: 188 LVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIY 247
L+DEM + + +A TY ++ Y DL E R+F++MK++ + Y+ L
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSF-VYTTLVDGC 742
Query: 248 VKAEQFEKAESMLRKLERKVKPR--PREAYLAAIYVKDNKFKKAGEMFQKLEQKVRPR-- 303
+ E+A ++ ++ P A + ++ K K + E+ +L R
Sbjct: 743 CRLNDVERAITIFGTNKKGCASSTAPFNALINWVF-KFGKTELKTEVLNRLMDGSFDRFG 801
Query: 304 -PRE-AYHCLISLYAKTGNLEKVYKLWYFLKSVS--PGINESYLIMICALKRLNDMKGLI 359
P + Y+ +I K GNLE +L++ +++ + P + +Y ++ ++ +
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTV-ITYTSLLNGYDKMGRRAEMF 860
Query: 360 KCFKEWESRCERYDLRLVSTVISAYLSEDMGEEAALVFKEAMKKS 404
F E + D + S +I+A+L E M +A ++ + K+
Sbjct: 861 PVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKN 905
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/412 (20%), Positives = 163/412 (39%), Gaps = 79/412 (19%)
Query: 69 IVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPP 128
+V L + +Q +L +++W+ + P + + V L V + K A F+ +
Sbjct: 125 MVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQR 184
Query: 129 AM--DMYTYGTLLNCYCQELMAD-----------------------------------KA 151
A+ D YTY TL+ + +E M D KA
Sbjct: 185 ALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKA 244
Query: 152 LDLFDKMNELGYVTSL-NFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNS 210
+ +F ++ G L +N+++ ++ K + L+ EM + + + +Y ++
Sbjct: 245 ISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSV 304
Query: 211 YAALNDLDEVERIFEKMK-----------------------VEDEDKIEWQ--------- 238
Y + E +F +MK V++ D++ W
Sbjct: 305 YVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPN 364
Query: 239 --TYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPREAY--LAAIYVKDNKFKKAGEMFQ 294
+Y+ + +Y +AE F +A + R ++RK + Y + IY K + +KA + Q
Sbjct: 365 VVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQ 424
Query: 295 KLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLWYFLKSVSPGINES-YLIMICALKRLN 353
+++ + Y +IS++ K G L++ L+ L+S I++ Y MI A +R+
Sbjct: 425 EMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERV- 483
Query: 354 DMKGLIKCFKEWESRCERYDLRLVSTVISAYLSEDMGEEAALVFKEAMKKSK 405
GL+ K + D T I+ EEA VF++A + +
Sbjct: 484 ---GLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGE 532
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 114/246 (46%), Gaps = 13/246 (5%)
Query: 78 RFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAM--DMYTY 135
+F +AL V M++ N T + + +D+ + V A+ F SL + ++ +Y
Sbjct: 310 KFLEALSVFAEMKEVNCALDLTTCN-IMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSY 368
Query: 136 GTLLNCYCQELMADKALDLFDKMN----ELGYVTSLNFNNLMTLFMKLGQPLKVHQLVDE 191
T+L Y + + +A+ LF M E VT +N ++ ++ K + K LV E
Sbjct: 369 NTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVT---YNTMIKIYGKTMEHEKATNLVQE 425
Query: 192 MKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAE 251
M+ R I +A TY ++ + LD +F+K++ + I+ Y + V Y +
Sbjct: 426 MQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVE-IDQVLYQTMIVAYERVG 484
Query: 252 QFEKAESMLRKLERKVKPRPREAYLAAIYVKDNKFKKAGEMFQKLEQKVRPRPREAYHCL 311
A+ +L +L+ PRE + I K + ++A +F++ + + + C+
Sbjct: 485 LMGHAKRLLHELKLP-DNIPRETAI-TILAKAGRTEEATWVFRQAFESGEVKDISVFGCM 542
Query: 312 ISLYAK 317
I+LY++
Sbjct: 543 INLYSR 548
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 110/238 (46%), Gaps = 8/238 (3%)
Query: 97 PRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAMDM--YTYGTLLNCYCQELMADKALDL 154
P +Y + +D VCK + AAE N + +++ + TL++ YC++ M D+A +
Sbjct: 362 PSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMI 421
Query: 155 FDKMNELGYVTSL-NFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAA 213
+D M + G+ + N + + F +L + + Q + M + + +S +Y ++ Y
Sbjct: 422 YDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCK 481
Query: 214 LNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPRE 273
+++E +R+F +M + TY+ + Y K + ++A + +E
Sbjct: 482 EGNVEEAKRLFVEMSSKGVQP-NAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSY 540
Query: 274 AYLAAIY---VKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLW 328
Y + I+ + DN +A +F ++ K + Y +IS +K G ++ + L+
Sbjct: 541 TYTSLIHGECIADN-VDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLY 597
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 128/265 (48%), Gaps = 9/265 (3%)
Query: 69 IVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPP 128
I+ K R F V++ M+K + + + + ++L K + AE F+ +
Sbjct: 265 IINAYVKQRDFSGVEGVLKVMKKDGVVYNKV-TYTLLMELSVKNGKMSDAEKLFDEMRER 323
Query: 129 AM--DMYTYGTLLNCYCQELMADKALDLFDKMNELGYV-TSLNFNNLMTLFMKLGQPLKV 185
+ D++ Y +L++ C++ +A LFD++ E G +S + L+ K+G+
Sbjct: 324 GIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAA 383
Query: 186 HQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAV 245
L++EM+ + + ++ ++ ++ Y +DE I++ M+ + + + T + +A
Sbjct: 384 EILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVME-QKGFQADVFTCNTIAS 442
Query: 246 IYVKAEQFEKAES-MLRKLERKVKPRPRE-AYLAAIYVKDNKFKKAGEMFQKLEQK-VRP 302
+ + +++++A+ + R +E VK L +Y K+ ++A +F ++ K V+P
Sbjct: 443 CFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQP 502
Query: 303 RPREAYHCLISLYAKTGNLEKVYKL 327
Y+ +I Y K G +++ KL
Sbjct: 503 NAI-TYNVMIYAYCKQGKIKEARKL 526
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 127/282 (45%), Gaps = 7/282 (2%)
Query: 131 DMYTYGTLLNCYCQELMADKALDLFDKMNELGY-VTSLNFNNLMTLFMKLGQPLKVHQLV 189
D+ T TL+N C +A+ L DKM E G ++ + ++ + K GQ +L+
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251
Query: 190 DEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVK 249
+M++RNI + A Y ++ LD +F +M+++ TY+ L +
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGI-TTNIITYNILIGGFCN 310
Query: 250 AEQFEKAESMLRK-LERKVKPRPRE-AYLAAIYVKDNKFKKAGEMFQKLEQKVRPRPREA 307
A +++ +LR ++RK+ P + L +VK+ K ++A E+ +++ +
Sbjct: 311 AGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTIT 370
Query: 308 YHCLISLYAKTGNLEKVYKLWYFL--KSVSPGINESYLIMICALKRLNDMKGLIKCFKEW 365
Y LI + K +L+K ++ + K P I ++ I+I + N + ++ F++
Sbjct: 371 YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNI-RTFNILINGYCKANRIDDGLELFRKM 429
Query: 366 ESRCERYDLRLVSTVISAYLSEDMGEEAALVFKEAMKKSKGP 407
R D +T+I + A +F+E + + P
Sbjct: 430 SLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPP 471
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 123/283 (43%), Gaps = 7/283 (2%)
Query: 69 IVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPP 128
++ K + ++A E+ + M R P T + +D CK + A + +
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIA-PDTITYTSLIDGFCKENHLDKANQMVDLMVSK 397
Query: 129 AMD--MYTYGTLLNCYCQELMADKALDLFDKMNELGYVT-SLNFNNLMTLFMKLGQPLKV 185
D + T+ L+N YC+ D L+LF KM+ G V ++ +N L+ F +LG+
Sbjct: 398 GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVA 457
Query: 186 HQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAV 245
+L EM R +P + TY ++ + ++ IFEK++ + + +++ Y+ +
Sbjct: 458 KELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIE-KSKMELDIGIYNIIIH 516
Query: 246 IYVKAEQFEKAESMLRKLERK-VKPRPRE-AYLAAIYVKDNKFKKAGEMFQKLEQKVRPR 303
A + + A + L K VKP + + K +A +F+K+E+
Sbjct: 517 GMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAP 576
Query: 304 PREAYHCLISLYAKTGNLEKVYKLWYFLKSVSPGINESYLIMI 346
Y+ LI + G+ K KL LK ++ S + M+
Sbjct: 577 DGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMV 619
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 109/252 (43%), Gaps = 7/252 (2%)
Query: 82 ALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAM--DMYTYGTLL 139
A+E++ ME+RN K +++ +D +CK + A + FN + + ++ TY L+
Sbjct: 247 AMELLRKMEERNIKLD-AVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305
Query: 140 NCYCQELMADKALDLF-DKMNELGYVTSLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIP 198
+C D L D + + F+ L+ F+K G+ + +L EM R I
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365
Query: 199 MSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAES 258
TY + ++ + N LD+ ++ + M + D +T++ L Y KA + +
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDP-NIRTFNILINGYCKANRIDDGLE 424
Query: 259 MLRKLERKVKPRPREAYLAAI--YVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYA 316
+ RK+ + Y I + + K A E+FQ++ + P Y L+
Sbjct: 425 LFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLC 484
Query: 317 KTGNLEKVYKLW 328
G EK +++
Sbjct: 485 DNGESEKALEIF 496
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 122/280 (43%), Gaps = 14/280 (5%)
Query: 134 TYGTLLNCYCQELMADKALDLFDKMNELGY-VTSLNFNNLMTLFMKLGQPLKVHQLVDEM 192
TYG +LN C+ A++L KM E + ++ ++ ++ K G L +EM
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289
Query: 193 KQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQ 252
+ + I + TY+ + + D+ ++ M ++ + T+S L +VK +
Sbjct: 290 EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM-IKRKINPNVVTFSVLIDSFVKEGK 348
Query: 253 FEKAESMLRK-LERKVKPRPREAYLAAI--YVKDNKFKKAGEMFQKLEQKVRPRPREAYH 309
+AE + ++ + R + P Y + I + K+N KA +M + K ++
Sbjct: 349 LREAEELHKEMIHRGIAPDTI-TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFN 407
Query: 310 CLISLYAKTGNLEKVYKLWYFLK---SVSPGINESYLIM-ICALKRLNDMKGLIKCFKEW 365
LI+ Y K ++ +L+ + V+ + + LI C L +LN K L F+E
Sbjct: 408 ILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL---FQEM 464
Query: 366 ESRCERYDLRLVSTVISAYLSEDMGEEAALVFKEAMKKSK 405
SR ++ ++ E+A +F E ++KSK
Sbjct: 465 VSRKVPPNIVTYKILLDGLCDNGESEKALEIF-EKIEKSK 503
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 138/318 (43%), Gaps = 22/318 (6%)
Query: 99 TYNHAV-------HLDLVCKTKGVVAAESYFNSLPPPAMDMYTYGTLLNCYCQELMADKA 151
TY+H V L+ VC G +A+ SLP D+ +Y LL Y + +A
Sbjct: 284 TYSHLVETFGKLRRLEKVCDLLGEMASGG---SLP----DITSYNVLLEAYAKSGSIKEA 336
Query: 152 LDLFDKMNELGYVTSLN-FNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNS 210
+ +F +M G + N ++ L+ LF + G+ V QL EMK N A TY+ +
Sbjct: 337 MGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEV 396
Query: 211 YAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPR 270
+ EV +F M VE+ + + +TY + K E A +L+ +
Sbjct: 397 FGEGGYFKEVVTLFHDM-VEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVP 455
Query: 271 PREAYLAAI--YVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNL-EKVYKL 327
+AY I + + +++A F + + E +H L+ +A+ G + E L
Sbjct: 456 SSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAIL 515
Query: 328 WYFLKSVSPGINESYLIMICALKRLNDMKGLIKCFKEWE-SRCERYDLRLVSTVISAYLS 386
+ S P +++ I A K+ + +K + + E SRC+ D R + V+S Y
Sbjct: 516 SRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDP-DERTLEAVLSVYSF 574
Query: 387 EDMGEEAALVFKEAMKKS 404
+ +E F+E MK S
Sbjct: 575 ARLVDECREQFEE-MKAS 591
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 122/272 (44%), Gaps = 9/272 (3%)
Query: 69 IVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPP 128
+ KE +Q +L + ++M+++ P + + + + L+ + + F+ +P
Sbjct: 111 VFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQ 170
Query: 129 AMD--MYTYGTLLNCYCQELMADKALDLFDKM-NELGYVTSLNFNNLMTLFMKLGQPLK- 184
+ +++Y L+N Y + + +L+L D+M NE + L +N ++ + G +
Sbjct: 171 GVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEG 230
Query: 185 VHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKI-EWQTYSNL 243
+ L EM+ I TY+ +++ A DE E +F M D + + TYS+L
Sbjct: 231 LLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMN--DGGIVPDLTTYSHL 288
Query: 244 AVIYVKAEQFEKAESMLRKLERKVKPRPREAY--LAAIYVKDNKFKKAGEMFQKLEQKVR 301
+ K + EK +L ++ +Y L Y K K+A +F +++
Sbjct: 289 VETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGC 348
Query: 302 PRPREAYHCLISLYAKTGNLEKVYKLWYFLKS 333
Y L++L+ ++G + V +L+ +KS
Sbjct: 349 TPNANTYSVLLNLFGQSGRYDDVRQLFLEMKS 380
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 118/268 (44%), Gaps = 20/268 (7%)
Query: 78 RFQDALEVMEWME-KRNSKFPRTYNHAVHLDLVCKTKGV-------VAAESYFNSLPPPA 129
R++ +LE+++ M+ ++ S TYN ++ C G+ + AE + P
Sbjct: 191 RYETSLELLDRMKNEKISPSILTYNTVIN---ACARGGLDWEGLLGLFAEMRHEGIQP-- 245
Query: 130 MDMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTSL-NFNNLMTLFMKLGQPLKVHQL 188
D+ TY TLL+ + D+A +F MN+ G V L +++L+ F KL + KV L
Sbjct: 246 -DIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDL 304
Query: 189 VDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYV 248
+ EM +Y+ + +YA + E +F +M+ TYS L ++
Sbjct: 305 LGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTP-NANTYSVLLNLFG 363
Query: 249 KAEQFEKAESMLRKLERKVKPRPREAY--LAAIYVKDNKFKKAGEMFQKL-EQKVRPRPR 305
++ +++ + +++ Y L ++ + FK+ +F + E+ + P
Sbjct: 364 QSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEP-DM 422
Query: 306 EAYHCLISLYAKTGNLEKVYKLWYFLKS 333
E Y +I K G E K+ ++ +
Sbjct: 423 ETYEGIIFACGKGGLHEDARKILQYMTA 450
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 139/330 (42%), Gaps = 8/330 (2%)
Query: 76 YRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAM--DMY 133
+ R +DA+ + + + K P + + +CK + + A FN + ++
Sbjct: 166 WNRIEDAIALFDQILGMGFK-PNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVV 224
Query: 134 TYGTLLNCYCQ-ELMADKALDLFDKMNELGYVTSLNFNNLMTLFMKLGQPLKVHQLVDEM 192
TY L+ C+ D A L D M + F L+ F+K+G+ ++ +L + M
Sbjct: 225 TYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVM 284
Query: 193 KQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQ 252
Q ++ FTY + +N LDE ++F M+ E Y+ L + K+++
Sbjct: 285 IQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNE-VIYTTLIHGFCKSKR 343
Query: 253 FEKAESMLRKLERKVKPRPREAYLAAI--YVKDNKFKKAGEMFQKLEQKVRPRPREAYHC 310
E + ++ +K Y I Y + A E+F ++ + P Y+
Sbjct: 344 VEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNV 403
Query: 311 LISLYAKTGNLEKVYKLWYFLKSVSPGIN-ESYLIMICALKRLNDMKGLIKCFKEWESRC 369
L+ G +EK ++ +++ IN +Y I+I + +L ++ F S+
Sbjct: 404 LLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKG 463
Query: 370 ERYDLRLVSTVISAYLSEDMGEEAALVFKE 399
+ ++ +T+IS + + EA +FK+
Sbjct: 464 MKPNVITYTTMISGFCRRGLIHEADSLFKK 493
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 106/480 (22%), Positives = 186/480 (38%), Gaps = 85/480 (17%)
Query: 86 MEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAMD--MYTYGTLLNCYC 143
ME +E + TYN V + CK V A Y + + +D +TY +L+ YC
Sbjct: 207 MEMLEDKVCPNIYTYNKMV--NGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYC 264
Query: 144 QELMADKALDLFDKM-------NELGYVTSLN-------FNNLMTLFMKL---------- 179
Q D A +F++M NE+ Y ++ + M LF+K+
Sbjct: 265 QRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVR 324
Query: 180 ----------GQPLKVH--QLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKM 227
G K LV EM++ I + TY ++S + ++ + +M
Sbjct: 325 TYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQM 384
Query: 228 KVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLE-RKVKPRPRE-AYLAAIYVKDNK 285
+E TY+ L Y K E A ++ +E RK+ P R L Y K N
Sbjct: 385 -LEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNV 443
Query: 286 FKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLWYFL--KSVSPGINESYL 343
K G + + LE+KV P Y+ LI ++GN + Y+L + + + P +Y
Sbjct: 444 HKAMGVLNKMLERKVLPDVV-TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPD-QWTYT 501
Query: 344 IMI---CALKRLNDMKGLIKCFKEWESRCERYDLRLVSTVISAYLSEDMGEEAALVFKEA 400
MI C KR+ + L F E + ++ + + +I Y +EA L+ ++
Sbjct: 502 SMIDSLCKSKRVEEACDL---FDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 401 MKKSKGPFF--------------KIRERFMV-----------------FFLEKRQLDGAV 429
+ K+ P K++E ++ + + DG
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDF 618
Query: 430 SHLEAALSEVVGDEWRPFPHVVRAFVKYY-KEETDLDGVDELSKILKTHNFDDSWLQSSI 488
H + +++ +P H F++ Y +E LD D ++K+ + D + SS+
Sbjct: 619 DHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSL 678
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 122/315 (38%), Gaps = 47/315 (14%)
Query: 47 ASETLNQYMTEGRVAGKSELMRIVKELRKYRRFQDALEVMEWMEKRN-SKFPRTYNHAVH 105
A E L Q + +G + ++ K +DA++V+E ME R S RTYN +
Sbjct: 377 ARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIK 436
Query: 106 --------------------------------LDLVCKTKGVVAAESYFNSLPPPAM--D 131
+D C++ +A + + + D
Sbjct: 437 GYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPD 496
Query: 132 MYTYGTLLNCYCQELMADKALDLFDKMNELGYVTS-LNFNNLMTLFMKLGQPLKVHQLVD 190
+TY ++++ C+ ++A DLFD + + G + + + L+ + K G+ + H +++
Sbjct: 497 QWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLE 556
Query: 191 EMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYV-- 248
+M +N ++ T++A ++ A L E + EKM KI Q + I +
Sbjct: 557 KMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMV-----KIGLQPTVSTDTILIHR 611
Query: 249 --KAEQFEKAESMLRK-LERKVKPRPRE-AYLAAIYVKDNKFKKAGEMFQKLEQKVRPRP 304
K F+ A S ++ L KP Y ++ + A +M K+ +
Sbjct: 612 LLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPD 671
Query: 305 REAYHCLISLYAKTG 319
Y LI Y G
Sbjct: 672 LFTYSSLIKGYGDLG 686
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/347 (20%), Positives = 152/347 (43%), Gaps = 25/347 (7%)
Query: 3 LVRLISGRGRLLRQLCTGATEANRPAKKQGLY-----------QRLSEKEKTGLSASETL 51
L+R +S G LL L +G + + +K L+ R S GL + L
Sbjct: 462 LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL 521
Query: 52 NQ-YMTEGRVAGKSELM------RIVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAV 104
++ + + + G+ +M ++ ++ +A ++ M KR K P Y +++
Sbjct: 522 DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK-PDNYTYSI 580
Query: 105 HLDLVCKTKGVVAAESYFNSLPPPAM--DMYTYGTLLNCYCQELMADKALDLFDKMNELG 162
+ + V A +++ M D+YTY +++ C+ ++ + FD+M
Sbjct: 581 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 163 Y-VTSLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVE 221
++ +N+L+ + + G+ +L ++MK + I ++ TY + + + ++ ++E +
Sbjct: 641 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 700
Query: 222 RIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPREAYLAAI-- 279
+FE+M++E + + Y+ L Y K Q K E +LR++ K + Y I
Sbjct: 701 LLFEEMRMEGLEPNVFH-YTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGG 759
Query: 280 YVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYK 326
Y +D +A + ++ +K Y I Y K G + + +K
Sbjct: 760 YARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/347 (20%), Positives = 152/347 (43%), Gaps = 25/347 (7%)
Query: 3 LVRLISGRGRLLRQLCTGATEANRPAKKQGLY-----------QRLSEKEKTGLSASETL 51
L+R +S G LL L +G + + +K L+ R S GL + L
Sbjct: 462 LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL 521
Query: 52 NQ-YMTEGRVAGKSELM------RIVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAV 104
++ + + + G+ +M ++ ++ +A ++ M KR K P Y +++
Sbjct: 522 DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK-PDNYTYSI 580
Query: 105 HLDLVCKTKGVVAAESYFNSLPPPAM--DMYTYGTLLNCYCQELMADKALDLFDKMNELG 162
+ + V A +++ M D+YTY +++ C+ ++ + FD+M
Sbjct: 581 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 163 Y-VTSLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVE 221
++ +N+L+ + + G+ +L ++MK + I ++ TY + + + ++ ++E +
Sbjct: 641 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 700
Query: 222 RIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPREAYLAAI-- 279
+FE+M++E + + Y+ L Y K Q K E +LR++ K + Y I
Sbjct: 701 LLFEEMRMEGLEPNVFH-YTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGG 759
Query: 280 YVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYK 326
Y +D +A + ++ +K Y I Y K G + + +K
Sbjct: 760 YARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 85/168 (50%), Gaps = 4/168 (2%)
Query: 100 YNHAVHLDLVCKTKGVVAAESYFNSLPPPAM--DMYTYGTLLNCYCQELMADKALDLFDK 157
+++ LD +CK + A +P + ++ +Y T+++ + + D+AL+LF +
Sbjct: 375 FSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGE 434
Query: 158 MNELGY-VTSLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALND 216
M LG + +++N L++++ K+G+ + ++ EM I TY+A + Y
Sbjct: 435 MRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGK 494
Query: 217 LDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLE 264
DEV+++F +MK E TYS L Y K +++A + R+ +
Sbjct: 495 YDEVKKVFTEMKREHVLP-NLLTYSTLIDGYSKGGLYKEAMEIFREFK 541
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 162/380 (42%), Gaps = 27/380 (7%)
Query: 118 AESYFNSLPPPAM--DMYTYGTLLNCYCQELMADKAL-DLFDKMNELGYVTS-LNFNNLM 173
A S FNS+ + ++ TY +++ + M K + FD+M G + FN+L+
Sbjct: 287 AISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLL 346
Query: 174 TLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDED 233
+ + G L DEM R I F+Y+ +++ +D I +M V+
Sbjct: 347 AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVK-RI 405
Query: 234 KIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPREAY--LAAIYVKDNKFKKAGE 291
+YS + + KA +F++A ++ ++ R +Y L +IY K + ++A +
Sbjct: 406 MPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALD 465
Query: 292 MFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLWYFLK--SVSPGINESYLIMICAL 349
+ +++ + Y+ L+ Y K G ++V K++ +K V P + +Y +I
Sbjct: 466 ILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNL-LTYSTLIDGY 524
Query: 350 KRLNDMKGLIKCFKEWESRCERYDLRLVSTVISAYLSEDMGEEAALVFKEAMKKSKGPFF 409
+ K ++ F+E++S R D+ L S +I A + A + E K+ P
Sbjct: 525 SKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNV 584
Query: 410 KIRERFMVFFLEKRQLD--------GAVSHLEAALSEVVGDEWRPFPHVVRAFVKYYKEE 461
+ F +D G++ +ALS + E V++ F + E
Sbjct: 585 VTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGN---RVIQLFGQLTTES 641
Query: 462 TDL------DGVDELSKILK 475
+ +G+ ELS IL+
Sbjct: 642 NNRTTKDCEEGMQELSCILE 661
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 148/315 (46%), Gaps = 17/315 (5%)
Query: 98 RTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAM--DMYTYGTLLNCYCQELMADKALDLF 155
+TYN V + + CK K A + + + D+++Y T++N + D AL+LF
Sbjct: 150 QTYN--VLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELF 207
Query: 156 DKMNELGYVTSLN-FNNLMTLFMKLGQPLKVHQLVDE-MKQRNIPMSAFTYHAWMNSYAA 213
D+M+E G + +N L+ F+K +L D ++ ++ + T++ ++ +
Sbjct: 208 DEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSK 267
Query: 214 LNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPRE 273
+D+ +I+E+MK + +K + TYS+L A +KAES+ +L+ +
Sbjct: 268 CGRVDDCLKIWERMKQNEREK-DLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVV 326
Query: 274 AY--LAAIYVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLWYFL 331
Y + + + K K++ E+++ +E K +Y+ LI + G +++ +W +
Sbjct: 327 TYNTMLGGFCRCGKIKESLELWRIMEHK-NSVNIVSYNILIKGLLENGKIDEATMIWRLM 385
Query: 332 KSVSPGINE-SYLIMI---CALKRLNDMKGLIKCFKEWESRCERYDLRLVSTVISAYLSE 387
+ ++ +Y I I C +N G++ +E ES D+ +++I +
Sbjct: 386 PAKGYAADKTTYGIFIHGLCVNGYVNKALGVM---QEVESSGGHLDVYAYASIIDCLCKK 442
Query: 388 DMGEEAALVFKEAMK 402
EEA+ + KE K
Sbjct: 443 KRLEEASNLVKEMSK 457
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 144/330 (43%), Gaps = 32/330 (9%)
Query: 40 KEKTGLSASETLNQYMTEGRVAGKSELMRI-VKELRKYRRFQDALEVMEWMEKRNSKFPR 98
KEK +A E ++ + + V + I + L K R D L++ E M K+N +
Sbjct: 231 KEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERM-KQNEREKD 289
Query: 99 TYNHAVHLDLVCKTKGVVAAESYFNSLP--PPAMDMYTYGTLLNCYCQELMADKALDLFD 156
Y ++ + +C V AES FN L ++D+ TY T+L +C+ ++L+L+
Sbjct: 290 LYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWR 349
Query: 157 KMNELGYVTSLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWM-----NSY 211
M V +++N L+ ++ G+ + + M + TY ++ N Y
Sbjct: 350 IMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGY 409
Query: 212 A--ALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLER---K 266
AL + EVE + V Y+++ K ++ E+A ++++++ + +
Sbjct: 410 VNKALGVMQEVESSGGHLDV--------YAYASIIDCLCKKKRLEEASNLVKEMSKHGVE 461
Query: 267 VKPRPREAYLAAIYVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYK 326
+ A + + ++D++ +A +++ + +Y+ LI K G +
Sbjct: 462 LNSHVCNALIGGL-IRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASA 520
Query: 327 LWYFLKSV-----SPGINESYLIMICALKR 351
F+K + P + ++Y I++C L R
Sbjct: 521 ---FVKEMLENGWKPDL-KTYSILLCGLCR 546
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 134/308 (43%), Gaps = 18/308 (5%)
Query: 31 QGLYQRLSEKEKTGLSASETLNQYMTEGRVAGKSELMRIVKELRKYRRFQDALEVMEWME 90
+ L R+S++E +TL++Y+ +V + +EL K ++ LEV WM+
Sbjct: 72 RSLMSRISDRE----PLVKTLDKYV---KVVRCDHCFLLFEELGKSDKWLQCLEVFRWMQ 124
Query: 91 KRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAM--DMYTYGTLLNCYCQELMA 148
K+ P ++ + ++ K A F+ + D Y L+ +
Sbjct: 125 KQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDK 184
Query: 149 DKALD----LFDKMN--ELGYVTSLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAF 202
KAL+ DKM E + +N L+ F + G+ +V+ L ++ + +
Sbjct: 185 AKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVY 244
Query: 203 TYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRK 262
T++ M++Y + E+E + +M+ +E K + T++ L Y K ++FEK E +
Sbjct: 245 TFNGVMDAYGKNGMIKEMEAVLTRMR-SNECKPDIITFNVLIDSYGKKQEFEKMEQTFKS 303
Query: 263 LER-KVKPR-PREAYLAAIYVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGN 320
L R K KP P + Y K KA +F+K+ Y C+I +Y G+
Sbjct: 304 LMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGS 363
Query: 321 LEKVYKLW 328
+ + +++
Sbjct: 364 VSRAREIF 371
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 133/306 (43%), Gaps = 12/306 (3%)
Query: 69 IVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPP 128
I++ L + + A+EV++ M +R+ +P + + ++ C+ GV A + +
Sbjct: 210 ILRSLCDSGKLKQAMEVLDRMLQRDC-YPDVITYTILIEATCRDSGVGHAMKLLDEMRDR 268
Query: 129 AM--DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTSLNFNNLMTLFM-KLGQPLKV 185
D+ TY L+N C+E D+A+ + M G ++ +N++ M G+ +
Sbjct: 269 GCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDA 328
Query: 186 HQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAV 245
+L+ +M ++ S T++ +N L I EKM + + +Y+ L
Sbjct: 329 EKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP-QHGCQPNSLSYNPLLH 387
Query: 246 IYVKAEQFEKA-ESMLRKLERKVKPR--PREAYLAAIYVKDNKFKKAGEMFQKLEQKVRP 302
+ K ++ ++A E + R + R P L A+ KD K + A E+ +L K
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTAL-CKDGKVEDAVEILNQLSSKGCS 446
Query: 303 RPREAYHCLISLYAKTGNLEKVYKLWYFL--KSVSPGINESYLIMICALKRLNDMKGLIK 360
Y+ +I AK G K KL + K + P +Y ++ L R + IK
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPD-TITYSSLVGGLSREGKVDEAIK 505
Query: 361 CFKEWE 366
F E+E
Sbjct: 506 FFHEFE 511
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 94/195 (48%), Gaps = 12/195 (6%)
Query: 82 ALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAM--DMYTYGTLL 139
A++++E M + + P + ++ L CK K + A Y + D+ TY T+L
Sbjct: 363 AIDILEKMPQHGCQ-PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTML 421
Query: 140 NCYCQELMADKALDLFDKMNELGYVTSL-NFNNLMTLFMKLGQPLKVHQLVDEMKQRNIP 198
C++ + A+++ ++++ G L +N ++ K G+ K +L+DEM+ +++
Sbjct: 422 TALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLK 481
Query: 199 MSAFTYHAWMNSYAALNDLDEVERI---FEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEK 255
TY + + + +DE + FE+M + + T++++ + K+ Q ++
Sbjct: 482 PDTITYSSLVGGLSREGKVDEAIKFFHEFERMGI----RPNAVTFNSIMLGLCKSRQTDR 537
Query: 256 A-ESMLRKLERKVKP 269
A + ++ + R KP
Sbjct: 538 AIDFLVFMINRGCKP 552
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 134/308 (43%), Gaps = 18/308 (5%)
Query: 31 QGLYQRLSEKEKTGLSASETLNQYMTEGRVAGKSELMRIVKELRKYRRFQDALEVMEWME 90
+ L R+S++E +TL++Y+ +V + +EL K ++ LEV WM+
Sbjct: 72 RSLMSRISDRE----PLVKTLDKYV---KVVRCDHCFLLFEELGKSDKWLQCLEVFRWMQ 124
Query: 91 KRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAM--DMYTYGTLLNCYCQELMA 148
K+ P ++ + ++ K A F+ + D Y L+ +
Sbjct: 125 KQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDK 184
Query: 149 DKALD----LFDKMN--ELGYVTSLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAF 202
KAL+ DKM E + +N L+ F + G+ +V+ L ++ + +
Sbjct: 185 AKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVY 244
Query: 203 TYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRK 262
T++ M++Y + E+E + +M+ +E K + T++ L Y K ++FEK E +
Sbjct: 245 TFNGVMDAYGKNGMIKEMEAVLTRMR-SNECKPDIITFNVLIDSYGKKQEFEKMEQTFKS 303
Query: 263 LER-KVKPR-PREAYLAAIYVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGN 320
L R K KP P + Y K KA +F+K+ Y C+I +Y G+
Sbjct: 304 LMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGS 363
Query: 321 LEKVYKLW 328
+ + +++
Sbjct: 364 VSRAREIF 371
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 135/307 (43%), Gaps = 23/307 (7%)
Query: 30 KQGLYQRLSEKEKTGLSASETLNQYMTEGRVAGKSELMRI-VKELRKYRRFQDALEVMEW 88
KQGLY S+KEK L MT + + I + +L + + ++A ++ E
Sbjct: 211 KQGLY---SKKEK--------LLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFEL 259
Query: 89 MEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAM--DMYTYGTLLNCYCQEL 146
M K++ P Y ++ +D CKT V A + + + ++ +GTL++ +C+
Sbjct: 260 M-KKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKAR 318
Query: 147 MADKALDLFDKMNELGYVTSLN-FNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYH 205
A LF M + G +L +N L+ K G L+ L+ EM+ N+ FTY
Sbjct: 319 ELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYT 378
Query: 206 AWMNSYAALNDLDEVERIFEKMKVEDEDKI--EWQTYSNLAVIYVKAEQFEKAESMLRKL 263
+N + + E R+F+KMK E +I TY++L Y K E+A + ++
Sbjct: 379 ILINGLCIEDQVAEANRLFQKMKNE---RIFPSSATYNSLIHGYCKEYNMEQALDLCSEM 435
Query: 264 ERK-VKPRPRE-AYLAAIYVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNL 321
V+P + L Y K A ++ ++ K Y LI + K N+
Sbjct: 436 TASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANM 495
Query: 322 EKVYKLW 328
++ +L+
Sbjct: 496 KEALRLY 502
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 3/161 (1%)
Query: 170 NNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKV 229
N L+ F KLG ++ + +MK+ I + +TY+ MN + +D ER+FE M+
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVME- 249
Query: 230 EDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPREAYLAAIYV--KDNKFK 287
K + TY+ + Y KA Q +KA LR +E + + Y+ I D+ F
Sbjct: 250 SGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFG 309
Query: 288 KAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLW 328
++Q++++K P A+ +I K G L + Y ++
Sbjct: 310 SCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVF 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 88/191 (46%), Gaps = 4/191 (2%)
Query: 69 IVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPP 128
++ L K + + V E M ++ SK P + V +D K+ V A + +
Sbjct: 333 VIGGLCKEGKLNEGYTVFENMIRKGSK-PNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE 391
Query: 129 AM--DMYTYGTLLNCYCQELMADKALDLFDKMNELGY-VTSLNFNNLMTLFMKLGQPLKV 185
D+ TY ++N C+ ++ALD F G + S+ +++L+ K G+ +
Sbjct: 392 GFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEA 451
Query: 186 HQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAV 245
+L +EM ++ ++ Y+A ++++ +DE +F++M+ E+ TY+ L
Sbjct: 452 ERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLS 511
Query: 246 IYVKAEQFEKA 256
K + E+A
Sbjct: 512 GMFKEHRNEEA 522
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 117/264 (44%), Gaps = 6/264 (2%)
Query: 69 IVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPP 128
IV K R +DAL ++ M ++ FP Y ++ +CK V A + +
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324
Query: 129 AM--DMYTYGTLLNCYCQELMADKALDLFDKM-NELGYVTSLNFNNLMTLFMKLGQPLKV 185
D+YTY ++++ C+ +A+++ D+M ++ +N L++ K Q +
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384
Query: 186 HQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAV 245
+L + + I T+++ + + +FE+M+ + + E+ TY+ L
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEF-TYNMLID 443
Query: 246 IYVKAEQFEKAESMLRKLERKVKPRPREAYLAAI--YVKDNKFKKAGEMFQKLEQKVRPR 303
+ ++A +ML+++E R Y I + K NK ++A E+F ++E R
Sbjct: 444 SLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSR 503
Query: 304 PREAYHCLISLYAKTGNLEKVYKL 327
Y+ LI K+ +E +L
Sbjct: 504 NSVTYNTLIDGLCKSRRVEDAAQL 527
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 109/255 (42%), Gaps = 40/255 (15%)
Query: 47 ASETLNQYMTEGRVAGKSELMRIVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHL 106
A E ++ + EG ++ L K ++A+EV++ M R+ P T + +
Sbjct: 314 AIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS-PNTVTYNTLI 372
Query: 107 DLVCK---------------TKGVVAAESYFNSLPPP---------AM------------ 130
+CK +KG++ FNSL AM
Sbjct: 373 STLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCE 432
Query: 131 -DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTS-LNFNNLMTLFMKLGQPLKVHQL 188
D +TY L++ C + D+AL++ +M G S + +N L+ F K + + ++
Sbjct: 433 PDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEI 492
Query: 189 VDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYV 248
DEM+ + ++ TY+ ++ +++ ++ ++M +E + K + TY++L +
Sbjct: 493 FDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ-KPDKYTYNSLLTHFC 551
Query: 249 KAEQFEKAESMLRKL 263
+ +KA +++ +
Sbjct: 552 RGGDIKKAADIVQAM 566
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 124/288 (43%), Gaps = 23/288 (7%)
Query: 131 DMYTYGTLLNCY--CQELMADKALDLFDKMNELGYVTSLNFNNLMTLFMKLGQPLKVHQL 188
D+Y L++CY C L A+ LF+KM+E V+ +N+++ +K G+ +L
Sbjct: 151 DIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVS---WNSMLGGLVKAGELRDARRL 207
Query: 189 VDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYV 248
DEM QR++ +++ ++ YA ++ + +FEKM + + + W T + + Y
Sbjct: 208 FDEMPQRDL----ISWNTMLDGYARCREMSKAFELFEKMP--ERNTVSWST---MVMGYS 258
Query: 249 KAEQFEKAESMLRKLERKVKPRPREAYLAAIYVKDNKFKKAGEMFQKLEQKVRPRPREAY 308
KA E A M K+ K + A Y + K+A + ++ A
Sbjct: 259 KAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAV 318
Query: 309 HCLISLYAKTGNLEKVYKLWYFLKSVSPGINESYL-IMICALKRLNDMKGLIKCFKEWES 367
+++ ++G L ++ LK + G N L ++ + ++K F +
Sbjct: 319 ISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFND--- 375
Query: 368 RCERYDLRLVSTVISAYLSEDMGEEAALVF----KEAMKKSKGPFFKI 411
+ DL +T++ G+EA +F +E ++ K F +
Sbjct: 376 -IPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAV 422
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 160/359 (44%), Gaps = 40/359 (11%)
Query: 66 LMRIVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSL 125
L +I+ + AL V M +N+ T+N ++ + + ++ A F+ +
Sbjct: 64 LNKIIARCVRSGDIDGALRVFHGMRAKNTI---TWN-SLLIGISKDPSRMMEAHQLFDEI 119
Query: 126 PPPAMDMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTSLNFNNLMTLFMKLGQPLKV 185
P P D ++Y +L+CY + + +KA FD+M + + ++N ++T + + G+ K
Sbjct: 120 PEP--DTFSYNIMLSCYVRNVNFEKAQSFFDRM---PFKDAASWNTMITGYARRGEMEKA 174
Query: 186 HQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAV 245
+L M ++N +++A ++ Y DL++ F+ V + W + +
Sbjct: 175 RELFYSMMEKN----EVSWNAMISGYIECGDLEKASHFFKVAPV--RGVVAW---TAMIT 225
Query: 246 IYVKAEQFEKAESMLRKLERKVKPRPREAYLAAIYVKDNKFKKAGEMFQK-LEQKVRPRP 304
Y+KA++ E AE+M + + A ++ YV++++ + ++F+ LE+ +RP
Sbjct: 226 GYMKAKKVELAEAMFKDMTVNKNLVTWNAMISG-YVENSRPEDGLKLFRAMLEEGIRPNS 284
Query: 305 REAYHCLISLYAKTGNLEKVYKLWYFLKSVSPGINE-----SYLIMICALKRLNDMKGLI 359
L+ ++ L+ ++ + + S S N+ S + M C L D L
Sbjct: 285 SGLSSALLGC-SELSALQLGRQI-HQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLF 342
Query: 360 KCFKEWESRCERYDLRLVSTVISAYLSEDMGEEAALVFKEAMKKSKGPFFKIRERFMVF 418
+ K + D+ + +IS Y ++A +F+E + KIR ++ F
Sbjct: 343 EVMK-------KKDVVAWNAMISGYAQHGNADKALCLFREMIDN------KIRPDWITF 388
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 129/292 (44%), Gaps = 17/292 (5%)
Query: 45 LSASETLNQYMTEGRVAGKSELMRIVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAV 104
L A+ +N+ + +G IV + K + AL ++ ME+ + K P ++
Sbjct: 243 LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIK-PDVVIYSA 301
Query: 105 HLDLVCKTKGVVAAESYFNSLPPPAM--DMYTYGTLLNCYCQELMADKALDLFDKMNELG 162
+D +CK A+ F+ + + +++TY +++ +C A L M E
Sbjct: 302 IIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE 361
Query: 163 YVTS-LNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVE 221
L FN L++ +K G+ + +L DEM R I TY++ + + N D+ +
Sbjct: 362 INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK 421
Query: 222 RIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPREAYLAAI-- 279
+F+ M D T++ + +Y +A++ ++ +LR++ R+ Y I
Sbjct: 422 HMFDLMASPD-----VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476
Query: 280 YVKDNKFKKAGEMFQK-LEQKVRPRPREAYHCLISLYAKTGN--LEKVYKLW 328
+ + + A ++FQ+ + V P + C I LY N LE+ +L+
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCP---DTITCNILLYGFCENEKLEEALELF 525
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 129/292 (44%), Gaps = 17/292 (5%)
Query: 45 LSASETLNQYMTEGRVAGKSELMRIVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAV 104
L A+ +N+ + +G IV + K + AL ++ ME+ + K P ++
Sbjct: 243 LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIK-PDVVIYSA 301
Query: 105 HLDLVCKTKGVVAAESYFNSLPPPAM--DMYTYGTLLNCYCQELMADKALDLFDKMNELG 162
+D +CK A+ F+ + + +++TY +++ +C A L M E
Sbjct: 302 IIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE 361
Query: 163 YVTS-LNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVE 221
L FN L++ +K G+ + +L DEM R I TY++ + + N D+ +
Sbjct: 362 INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK 421
Query: 222 RIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPREAYLAAI-- 279
+F+ M D T++ + +Y +A++ ++ +LR++ R+ Y I
Sbjct: 422 HMFDLMASPD-----VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476
Query: 280 YVKDNKFKKAGEMFQK-LEQKVRPRPREAYHCLISLYAKTGN--LEKVYKLW 328
+ + + A ++FQ+ + V P + C I LY N LE+ +L+
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCP---DTITCNILLYGFCENEKLEEALELF 525
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 144/328 (43%), Gaps = 20/328 (6%)
Query: 42 KTGLS--ASETLNQYMTEGRVAGKSELMRIVKELRKYRRFQDALEVMEWMEKRNSKFPRT 99
+ GL+ A N+ G V K ++ L + RR +A + ++ R
Sbjct: 198 RAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEP---- 253
Query: 100 YNHAVHLDLV---CKTKGVVAAESYFNSLPPPAM--DMYTYGTLLNCYCQELMADKALDL 154
+ V+ +LV C+ + AE F + + ++YTY +++ C+ +A D+
Sbjct: 254 -DVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDV 312
Query: 155 FDKMNELGYV-TSLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAA 213
F M + G ++ FNNLM + +K G+ KV Q+ ++MK+ TY+ + ++
Sbjct: 313 FADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCR 372
Query: 214 LNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRK-LERKVKPRPR 272
+L+ ++ M ++ + ++ T++ + K A M K +E K +P
Sbjct: 373 DENLENAVKVLNTM-IKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTV 431
Query: 273 E-AYLAAIYVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLWYFL 331
L ++V +M ++++ K Y L++++ G+ YKL+ +
Sbjct: 432 TYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEM 491
Query: 332 ---KSVSPGINESYLIMICALKRLNDMK 356
K ++P ++ Y +++ L+R +K
Sbjct: 492 VEEKCLTPSLS-LYEMVLAQLRRAGQLK 518
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/244 (19%), Positives = 112/244 (45%), Gaps = 8/244 (3%)
Query: 97 PRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAM--DMYTYGTLLNCYCQELMADKALDL 154
P+TY + + +C + V AA F+ +P + +T+G L+ YC+ + DK L+L
Sbjct: 145 PQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLEL 204
Query: 155 FDKMNELGYVTS-LNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAA 213
+ M G + + + +N +++ F + G+ ++V++M++ + T+++ +++
Sbjct: 205 LNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCK 264
Query: 214 LNDLDEVERIFEKMKVEDE---DKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPR 270
+ + RIF M++++ + TY+ + + K E A+++ +
Sbjct: 265 EGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLA 324
Query: 271 PREAYLAAI--YVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLW 328
++Y + V+ KF +A + +++ K +Y+ L+ K G L +
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV 384
Query: 329 YFLK 332
+K
Sbjct: 385 GLMK 388
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 130/304 (42%), Gaps = 42/304 (13%)
Query: 70 VKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYF-----NS 124
++ L ++ +F +A V++ M + P Y++ + +D +CK + A++ N
Sbjct: 333 LQGLVRHGKFIEAETVLKQMTDKGIG-PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNG 391
Query: 125 LPPPAMDMYTYGTLLNCYCQELMADKALDLFDKM---NELGYVTSLNFNNLMTLFMKLGQ 181
+ P D TYG LL+ YC D A L +M N L + N L+ K+G+
Sbjct: 392 VCP---DAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNI--LLHSLWKMGR 446
Query: 182 PLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVE----------- 230
+ +L+ +M ++ + T + ++ +LD+ I + M+V
Sbjct: 447 ISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNS 506
Query: 231 -----DEDKIEWQ------TYSNLAVIYVKAEQFEKAESMLRK-LERKVKPRPREAYLAA 278
D+ IE TYS L KA +F +A+++ + + K++P AY
Sbjct: 507 YIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSV-AYNIF 565
Query: 279 I--YVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLWYFL--KSV 334
I + K K A + + +E+K + E Y+ LI + +++ L + K +
Sbjct: 566 IHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGI 625
Query: 335 SPGI 338
SP I
Sbjct: 626 SPNI 629
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 97/197 (49%), Gaps = 8/197 (4%)
Query: 131 DMYTYGTLLNCYCQELMADKALDLFDKMNELGYV-TSLNFNNLMTLFMKLGQPLKVHQLV 189
++ TY L+N +C+ M +ALD+F + G V T+ +N L+ + KLG+ L
Sbjct: 365 NLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALK 424
Query: 190 DEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVK 249
+EM++ I TY+ + +++ +++F+++ + + T+ L Y +
Sbjct: 425 EEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQL--TSKGLPDLVTFHILMEGYCR 482
Query: 250 AEQFEKAESMLRKLERKVKPRPREAYLAAI---YVKDNKFKKAGEMFQKLEQKVRPRPRE 306
+ KA +L+++ K+ +PR + Y K+ K A M ++E++ R R
Sbjct: 483 KGESRKAAMLLKEMS-KMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNV 541
Query: 307 A-YHCLISLYAKTGNLE 322
A Y+ L+ Y++ G LE
Sbjct: 542 ASYNVLLQGYSQKGKLE 558
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 138/287 (48%), Gaps = 15/287 (5%)
Query: 131 DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTSL-NFNNLMTLFMKLGQPLKVHQ-- 187
+++T+ ++N C+ +KA D+ + M G ++ ++N L+ + KLG K+++
Sbjct: 222 NVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKAD 281
Query: 188 -LVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVI 246
++ EM + ++ + T++ ++ + ++L ++F++M ++ + K +Y++L
Sbjct: 282 AVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEM-LDQDVKPNVISYNSLING 340
Query: 247 YVKAEQFEKAESMLRKL-ERKVKPRPREAYLAAI--YVKDNKFKKAGEMFQKLE-QKVRP 302
+ +A SM K+ V+P Y A I + K++ K+A +MF ++ Q P
Sbjct: 341 LCNGGKISEAISMRDKMVSAGVQPN-LITYNALINGFCKNDMLKEALDMFGSVKGQGAVP 399
Query: 303 RPREAYHCLISLYAKTGNLEKVYKLWYFL--KSVSPGINESYLIMICALKRLNDMKGLIK 360
R Y+ LI Y K G ++ + L + + + P + +Y +I L R +++ K
Sbjct: 400 TTR-MYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVG-TYNCLIAGLCRNGNIEAAKK 457
Query: 361 CFKEWESRCERYDLRLVSTVISAYLSEDMGEEAALVFKEAMKKSKGP 407
F + S+ DL ++ Y + +AA++ KE K P
Sbjct: 458 LFDQLTSK-GLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKP 503
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 148/355 (41%), Gaps = 28/355 (7%)
Query: 69 IVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPP 128
++K + K + A+E++ ME+R K +++ +D +CK + A + FN +
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLD-AVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 276
Query: 129 AM--DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTSL-NFNNLMTLFMKLGQPLKV 185
D+ Y TL+ +C D L M + + F+ L+ F+K G+ +
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336
Query: 186 HQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAV 245
+L EM QR I TY + ++ + N LD+ + + M V +T++ L
Sbjct: 337 EELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM-VSKGCGPNIRTFNILIN 395
Query: 246 IYVKAEQFEKAESMLRKLERKVKPRPREAYLAAI--YVKDNKFKKAGEMFQKL-EQKVRP 302
Y KA + + RK+ + Y I + + K + A E+FQ++ ++VRP
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455
Query: 303 RPREAYHCLISLYAKTGNLEKVYKLWYFLKS----VSPGINESYLIMICALKRLNDMKGL 358
+Y L+ G EK +++ ++ + GI + +C +++D
Sbjct: 456 DI-VSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD---- 510
Query: 359 IKCFKEWESRCE------RYDLRLVSTVISAYLSEDMGEEAALVFKEAMKKSKGP 407
W+ C + D++ + +I + EA L+F++ + P
Sbjct: 511 -----AWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSP 560
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/384 (20%), Positives = 149/384 (38%), Gaps = 45/384 (11%)
Query: 80 QDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTK--GVVAAESYFNSLPPPAMDMYTYGT 137
DA+++ + M + + PR + + +V +TK +V L A ++YT
Sbjct: 54 DDAVDLFQEMTRSRPR-PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSI 112
Query: 138 LLNCYCQELMADKALDLFDKMNELGY-VTSLNFNNLMTLFMKLGQPLKVHQLVDEMKQRN 196
++NC C+ A K+ +LGY ++ F+ L+ G+ + +LVD M +
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172
Query: 197 IPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKA 256
+ T +A +N + + + ++M VE + TY + + K+ Q A
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRM-VETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 257 ESMLRKL-ERKVK-PRPREAYLAAIYVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISL 314
+LRK+ ERK+K + + + KD A +F ++E K Y LI
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 315 YAKTGNLEKVYKLWYFL--KSVSPGINESYLIMICALKRLNDMKGLIKCFKEWESRCERY 372
+ G + KL + + ++P
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITP------------------------------------ 315
Query: 373 DLRLVSTVISAYLSEDMGEEAALVFKEAMKKSKGPFFKIRERFMVFFLEKRQLDGAVSHL 432
D+ S +I ++ E EA + KE +++ P + F ++ QLD A L
Sbjct: 316 DVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHML 375
Query: 433 EAALSEVVGDEWRPFPHVVRAFVK 456
+ +S+ G R F ++ + K
Sbjct: 376 DLMVSKGCGPNIRTFNILINGYCK 399
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 105/247 (42%), Gaps = 8/247 (3%)
Query: 91 KRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAMD--MYTYGTLLNCYCQELMA 148
+RNS P +++ + C+ K + A N + + T+G L++ +C+
Sbjct: 169 RRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKM 228
Query: 149 DKALDLFDKMNELGYVTSLN-FNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAW 207
D+A+ +M +G L + +L+ F G+ + L DE+ +R A TY+
Sbjct: 229 DEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTL 288
Query: 208 MNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKV 267
+ + L L E IFE M +E + TY+ L + ++A +L + K
Sbjct: 289 IRGFCKLGQLKEASEIFEFM-IERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347
Query: 268 KPRPREAYLAAI--YVKDNKFKKAGEMFQKLEQKVRPRPRE-AYHCLISLYAKTGNLEKV 324
+ Y I KD A E+ + L +K R RP Y+ L+ G+L++
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVE-LMKKRRTRPDNITYNILLGGLCAKGDLDEA 406
Query: 325 YKLWYFL 331
KL Y +
Sbjct: 407 SKLLYLM 413
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 92/491 (18%), Positives = 190/491 (38%), Gaps = 98/491 (19%)
Query: 69 IVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPP 128
+++ + + + ALE+ M+ + + +D CK + A + +
Sbjct: 183 VIRGFCEGKELEKALELANEMKGSGCSWSLV-TWGILIDAFCKAGKMDEAMGFLKEMKFM 241
Query: 129 AM--DMYTYGTLLNCYCQELMADKALDLFDKMNELG-YVTSLNFNNLMTLFMKLGQPLKV 185
+ D+ Y +L+ +C D+ LFD++ E G ++ +N L+ F KLGQ +
Sbjct: 242 GLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEA 301
Query: 186 HQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAV 245
++ + M +R + + +TY ++ + E ++ M +E +++ TY N+ +
Sbjct: 302 SEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLM-IEKDEEPNAVTY-NIII 359
Query: 246 IYVKAEQFEKAESMLRKLERKVKPRPRE-------------------------------- 273
+ + + +L +K + RP
Sbjct: 360 NKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSY 419
Query: 274 ------AYLAAIY--VKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVY 325
+Y A I+ K+N+ +A +++ L +K+ R + L++ K G++ K
Sbjct: 420 TDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAM 479
Query: 326 KLWYFLKSVSPGI----NESYLIMI---CALKRLNDMKGLIKCFKEWESRCERYDLRLVS 378
+LW K +S +++Y MI C LN KGL+ + E + +D +
Sbjct: 480 ELW---KQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFD---YN 533
Query: 379 TVISAYLSEDMGEEAALVFKEAMKKSKGP----------------FFKIRERFMVF---- 418
++S+ E ++A +F+E + + P K E +V
Sbjct: 534 CLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRA 593
Query: 419 ---------------FLEKRQLDGAVSHLEAALSEVVGDEWRPFPHVVRAFVKYYKEETD 463
FL+ LD A+S + ++V + P H+ + +KY + +
Sbjct: 594 GLSPDLFTYSKLINRFLKLGYLDEAISFFD----KMVDSGFEPDAHICDSVLKYCISQGE 649
Query: 464 LDGVDELSKIL 474
D + EL K L
Sbjct: 650 TDKLTELVKKL 660
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 87/220 (39%), Gaps = 33/220 (15%)
Query: 17 LCTGATEANRPAKKQGLYQRLSEKEKTG--LSASETLNQYMTEGRVAGKSELMRIVKELR 74
L G + NR + +Y L EK G ++ + LN + G V EL
Sbjct: 430 LIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMEL-------- 481
Query: 75 KYRRFQDALEVMEWMEKRNSKFPRTYN-HAVHLDLVCKTKGVVAAESYF-----NSLPPP 128
W + +SK R + + +D CKT + A+ + L P
Sbjct: 482 -------------WKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPS 528
Query: 129 AMDMYTYGTLLNCYCQELMADKALDLFDKMN-ELGYVTSLNFNNLMTLFMKLGQPLKVHQ 187
D Y LL+ C+E D+A LF++M + + ++FN ++ +K G
Sbjct: 529 VFD---YNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAES 585
Query: 188 LVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKM 227
L+ M + + FTY +N + L LDE F+KM
Sbjct: 586 LLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM 625
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 104/245 (42%), Gaps = 26/245 (10%)
Query: 13 LLRQLCTGATEANRPAKKQGLYQRLSEKE--KTGLSASETLNQYMTEGRVAGKSELMR-- 68
++ +LC N Q L+ + EK L+ + ++ + GR + +L+R
Sbjct: 16 IVDRLCKDGNHIN----AQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHM 71
Query: 69 --------------IVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKG 114
++ K R+ +A E+ + M R S FP T + +D CK
Sbjct: 72 IEKQINPDIVTFSALINAFVKERKVSEAEEIYKEM-LRWSIFPTTITYNSMIDGFCKQDR 130
Query: 115 VVAAESYFNSLPPPAM--DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVT-SLNFNN 171
V A+ +S+ D+ T+ TL+N YC+ D +++F +M+ G V ++ +
Sbjct: 131 VDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 190
Query: 172 LMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVED 231
L+ F ++G L++EM + T+H + + +L + I E ++ +
Sbjct: 191 LIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSE 250
Query: 232 EDKIE 236
+ +E
Sbjct: 251 DHHLE 255
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 131/272 (48%), Gaps = 21/272 (7%)
Query: 70 VKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESY--FNSLPP 127
+ L +R+ DA EV E M+K N +P A+ + + K G A E + F +
Sbjct: 280 ISGLSASQRYDDAWEVYEAMDKINV-YPDNVTCAILITTLRKA-GRSAKEVWEIFEKMSE 337
Query: 128 PAM--DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVT-SLNFNNLMTLFMKLGQPLK 184
+ +G L+ +C E + ++AL + +M + G + ++ +N LM + K +
Sbjct: 338 KGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEE 397
Query: 185 VHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVED---EDKIEWQTYS 241
V L EM+ + + SA TY+ M++YA D VE + +M ED E + ++Y+
Sbjct: 398 VEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREM--EDLGLEPNV--KSYT 453
Query: 242 NLAVIYVKAEQFE--KAESMLRKLERKVKPRPREAYLAAI--YVKDNKFKKAGEMFQKL- 296
L Y + ++ A++ LR + +KP +Y A I Y +KA F+++
Sbjct: 454 CLISAYGRTKKMSDMAADAFLRMKKVGLKPS-SHSYTALIHAYSVSGWHEKAYASFEEMC 512
Query: 297 EQKVRPRPREAYHCLISLYAKTGNLEKVYKLW 328
++ ++P E Y ++ + ++G+ K+ ++W
Sbjct: 513 KEGIKPSV-ETYTSVLDAFRRSGDTGKLMEIW 543
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 123/287 (42%), Gaps = 7/287 (2%)
Query: 47 ASETLNQYMTEGRVAGKSELMRIVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHL 106
A L + + G + + +V + R DA+ +++ M + K P + +
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK-PDIVAYNAII 197
Query: 107 DLVCKTKGVVAAESYFNSLPPPAM--DMYTYGTLLNCYCQELM-ADKALDLFDKMNELGY 163
D +CKTK V A +F + + ++ TY L+N C +D A L D + +
Sbjct: 198 DSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKIT 257
Query: 164 VTSLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERI 223
+ ++ L+ F+K G+ L+ +L +EM + +I TY + +N + +DE ++
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQM 317
Query: 224 FEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPREAYLAAI--YV 281
F+ M V + +Y+ L + KA++ E + R++ ++ Y I +
Sbjct: 318 FDLM-VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFF 376
Query: 282 KDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLW 328
+ KA E F +++ Y+ L+ G LEK ++
Sbjct: 377 QAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 116/263 (44%), Gaps = 35/263 (13%)
Query: 17 LCTGATEANRPAKKQGLYQRLSEKEKTG--LSASETLNQYMTEGRVAGKSEL------MR 68
L G ++R + L + +K+ T ++ S L+ ++ G+V EL M
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS 290
Query: 69 IVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPP 128
I ++ Y + L + + +++ N F DL+ +KG +A
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMF----------DLMV-SKGCLA----------- 328
Query: 129 AMDMYTYGTLLNCYCQELMADKALDLFDKMNELGYVT-SLNFNNLMTLFMKLGQPLKVHQ 187
D+ +Y TL+N +C+ + + LF +M++ G V+ ++ +N L+ F + G K +
Sbjct: 329 --DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE 386
Query: 188 LVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIY 247
+M I +TY+ + +L++ IFE M+ + D ++ TY+ +
Sbjct: 387 FFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD-LDIVTYTTVIRGM 445
Query: 248 VKAEQFEKAESMLRKLERK-VKP 269
K + E+A S+ L K +KP
Sbjct: 446 CKTGKVEEAWSLFCSLSLKGLKP 468
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 166/382 (43%), Gaps = 35/382 (9%)
Query: 78 RFQDALEVMEWM-EKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAM--DMYT 134
+F +AL++ M E R P + L+++ K K + + L + D+YT
Sbjct: 52 QFNEALDLFTHMVESR--PLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYT 109
Query: 135 YGTLLNCYCQELMADKALDLFDKMNELGYVTSL-NFNNLMTLFMKLGQPLKVHQLVDEMK 193
L+NC+CQ A KM +LG+ + F +L+ F + + +V++M
Sbjct: 110 CNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV 169
Query: 194 QRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQF 253
+ I Y ++S ++ +F++M+ + + Y++L + ++
Sbjct: 170 EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQME-NYGIRPDVVMYTSLVNGLCNSGRW 228
Query: 254 EKAESMLRKL-ERKVKPR--PREAYLAAIYVKDNKFKKAGEMFQKLEQKVRPRPREAYHC 310
A+S+LR + +RK+KP A + A +VK+ KF A E++ ++ + Y
Sbjct: 229 RDADSLLRGMTKRKIKPDVITFNALIDA-FVKEGKFLDAEELYNEMIRMSIAPNIFTYTS 287
Query: 311 LISLYAKTGNLEKVYKLWYFL--KSVSPGINESYLIMI---CALKRLNDMKGLIKCFKEW 365
LI+ + G +++ +++Y + K P + +Y +I C K+++D +K F E
Sbjct: 288 LINGFCMEGCVDEARQMFYLMETKGCFPDV-VAYTSLINGFCKCKKVDDA---MKIFYEM 343
Query: 366 ESRCERYDLRLVSTVISAYLSEDMGEEAALVFKEAMKKSKGPFF--------------KI 411
+ + +T+I + A VF + + P K+
Sbjct: 344 SQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKV 403
Query: 412 RERFMVF-FLEKRQLDGAVSHL 432
++ M+F ++KR++DG ++
Sbjct: 404 KKALMIFEDMQKREMDGVAPNI 425
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 118/271 (43%), Gaps = 10/271 (3%)
Query: 69 IVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPP 128
++ L K + A E++E M RN P Y H +D +CK A F L
Sbjct: 293 LIDGLCKKGSIKQAFEMLEEM-VRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRS 351
Query: 129 AM---DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTSLN-FNNLMTLFMKLGQPLK 184
+++TY +++ YC+E ++A LF +M E G ++N + L+ K G +
Sbjct: 352 DTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGR 411
Query: 185 VHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLA 244
++L++ M + +TY+A ++S + E + K + + TY+ L
Sbjct: 412 AYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNK-AFSCGLEADGVTYTILI 470
Query: 245 VIYVKAEQFEKAESMLRKLER---KVKPRPREAYLAAIYVKDNKFKKAGEMFQKLEQKVR 301
K +A + ++ + + R +AA + + K K++ +FQ +
Sbjct: 471 QEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAA-FCRQKKMKESERLFQLVVSLGL 529
Query: 302 PRPREAYHCLISLYAKTGNLEKVYKLWYFLK 332
+E Y +IS Y K G+++ K ++ +K
Sbjct: 530 IPTKETYTSMISCYCKEGDIDLALKYFHNMK 560
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 120/274 (43%), Gaps = 8/274 (2%)
Query: 131 DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTSL-NFNNLMTLFMKLGQPLKVHQLV 189
D T +L C+ + ++A+ F KM +LG+ +L NF +L+ K G + +++
Sbjct: 251 DNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEML 310
Query: 190 DEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVK 249
+EM + + +T+ A ++ ++ R+F K+ D K TY+++ Y K
Sbjct: 311 EEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCK 370
Query: 250 AEQFEKAESMLRKLERKVKPRPREAYLAAI--YVKDNKFKKAGEMFQKLEQKVRPRPREA 307
++ +AE + +++ + Y I + K F +A E+ + +
Sbjct: 371 EDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYT 430
Query: 308 YHCLISLYAKTGNLEKVYKLWYFLKSVSPGINE---SYLIMICALKRLNDMKGLIKCFKE 364
Y+ I K + Y+L K+ S G+ +Y I+I + ND+ + F
Sbjct: 431 YNAAIDSLCKKSRAPEAYELLN--KAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCR 488
Query: 365 WESRCERYDLRLVSTVISAYLSEDMGEEAALVFK 398
D+RL + +I+A+ + +E+ +F+
Sbjct: 489 MNKTGFEADMRLNNILIAAFCRQKKMKESERLFQ 522
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 87/188 (46%), Gaps = 5/188 (2%)
Query: 79 FQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPA--MDMYTYG 136
F A +V M R P Y+ + + CKT AA N++ M++ Y
Sbjct: 127 FDQAHKVYMRMRDRGIT-PDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYC 185
Query: 137 TLLNCYCQELMADKALDLFDKMNELGYVTSLN-FNNLMTLFMKLGQPLKVHQLVDEMKQR 195
T++ + +E + +LF KM G L+ FN L+ + K G + +L+D++ +R
Sbjct: 186 TVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKR 245
Query: 196 NIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEK 255
+ + FTY+ ++ +LD R+ + +E K + TY+NL K +F++
Sbjct: 246 GVLPNLFTYNLFIQGLCQRGELDGAVRMVGCL-IEQGPKPDVITYNNLIYGLCKNSKFQE 304
Query: 256 AESMLRKL 263
AE L K+
Sbjct: 305 AEVYLGKM 312
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/303 (19%), Positives = 125/303 (41%), Gaps = 16/303 (5%)
Query: 69 IVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPP 128
++K L +A ++ M ++ P + ++ +CK V A+ +
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEK-GLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISK 455
Query: 129 AM--DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTSL-NFNNLMTLFMKLGQPLKV 185
D++T+ L++ Y +L + AL++ D M + G + +N+L+ K + V
Sbjct: 456 GYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDV 515
Query: 186 HQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAV 245
+ M ++ + FT++ + S LDE + E+MK + + + T+ L
Sbjct: 516 METYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNP-DAVTFGTLID 574
Query: 246 IYVKAEQFEKAESMLRKLERKVK---PRPREAYLAAIYVKDNKFKKAGEMFQKLEQKVRP 302
+ K + A ++ RK+E K P + + + A ++FQ++ +
Sbjct: 575 GFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLG 634
Query: 303 RPREAYHCLISLYAKTGNLEKVYKLWYFLKSVSPGINESYLIM------ICALKRLNDMK 356
Y ++ + KTGN+ YK + L+ + G S + +C R+ +
Sbjct: 635 PDGYTYRLMVDGFCKTGNVNLGYK--FLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAA 692
Query: 357 GLI 359
G+I
Sbjct: 693 GII 695
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 118/253 (46%), Gaps = 11/253 (4%)
Query: 102 HAVHLDLVCKTKGVVAAESYFNSLPPPAM--DMYTYGTLLNCYCQELMADKALDLFDKMN 159
++ +D +CK + A + F + + ++ TY +L++C C A L M
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 160 ELGYVTSL-NFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLD 218
E +L F+ L+ F+K G+ +K +L +EM +R+I + FTY + +N + L+ L
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375
Query: 219 EVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPREAYLAA 278
E +++ E M + + TY+ L + KA++ +K + R++ ++ Y
Sbjct: 376 EAKQMLELM-IRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTL 434
Query: 279 I--YVKDNKFKKAGEMF-QKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLWYFLK--S 333
I + + A +F Q + V P Y+ L+ K G L K ++ +L+ +
Sbjct: 435 IHGFFQARDCDNAQMVFKQMVSVGVHPNIL-TYNILLDGLCKNGKLAKAMVVFEYLQRST 493
Query: 334 VSPGINESYLIMI 346
+ P I +Y IMI
Sbjct: 494 MEPDI-YTYNIMI 505
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 101/240 (42%), Gaps = 14/240 (5%)
Query: 131 DMYTYGTLLNCYCQELMADKALDLFDKMNELGY-VTSLNFNNLMTLFMKLGQPLKVHQLV 189
D+ T +LLN +C A+ L D+M E+GY ++ F L+ + + L+
Sbjct: 147 DIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALI 206
Query: 190 DEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQT--YSNLAVIY 247
D M QR TY A +N D D + KM+ KIE YS +
Sbjct: 207 DRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAA---KIEANVVIYSTVIDSL 263
Query: 248 VKAEQFEKAESMLRKLERK-VKPRPRE-AYLAAIYVKDNKFKKAGEMFQK-LEQKVRPRP 304
K + A ++ ++E K V+P + L + ++ A + +E+K+ P
Sbjct: 264 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPN- 322
Query: 305 REAYHCLISLYAKTGNLEKVYKLW--YFLKSVSPGI--NESYLIMICALKRLNDMKGLIK 360
+ LI + K G L K KL+ +S+ P I S + C L RL + K +++
Sbjct: 323 LVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLE 382
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 85/178 (47%), Gaps = 5/178 (2%)
Query: 96 FPRTYNHAVHLDLVCKTKGVVAAESYFNSLPP--PAMDMYTYGTLLNCYCQELMADKALD 153
FP T +++++ +C+ + A S S +D YTYG++++ Q KALD
Sbjct: 816 FPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALD 875
Query: 154 LFDKMNELGYVTSLN-FNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYA 212
+ M E+G ++ + +L+ F K Q KV + +M+ + S TY A + Y
Sbjct: 876 KVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYM 935
Query: 213 ALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRK-LERKVKP 269
+L ++E F M+ E +++TYS +A + E A +L + L++ + P
Sbjct: 936 SLGKVEEAWNAFRNME-ERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAP 992
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 4/164 (2%)
Query: 110 CKTKGVVAAESYFNSLPPPA--MDMYTYGTLLNCYCQELMADKALDLFDKMNELGY-VTS 166
CK AE+ F+ + +D Y L+ YC++ A+ L+ +M E + +
Sbjct: 248 CKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDP 307
Query: 167 LNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEK 226
FN L+ FMKLG K + +M ++ + + FTYH + SY ++D R+F
Sbjct: 308 CIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVN 367
Query: 227 MKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESML-RKLERKVKP 269
++ Y+NL + K +KA +L R L+ + P
Sbjct: 368 NTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVP 411
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 96/206 (46%), Gaps = 14/206 (6%)
Query: 131 DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVT-SLNFNNLMTLFMKLGQPLKVHQLV 189
D TY TL+ M K +KM E GYV+ + + +++ F+KLGQ ++
Sbjct: 539 DKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVY 598
Query: 190 DEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQT--YSNLAVIY 247
EM + NI Y +N++A ++ + E MK E I + Y++L +Y
Sbjct: 599 KEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMK---EAGIPGNSVIYNSLIKLY 655
Query: 248 VKAEQFEKAESMLRKLERKV-KPRPREAY----LAAIYVKDNKFKKAGEMFQKLEQKVRP 302
K ++AE++ RKL + K + + Y + +Y + + +KA +F ++Q R
Sbjct: 656 TKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQ--RG 713
Query: 303 RPRE-AYHCLISLYAKTGNLEKVYKL 327
E + ++ +Y K G E+ ++
Sbjct: 714 EANEFTFAMMLCMYKKNGRFEEATQI 739
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 143/349 (40%), Gaps = 51/349 (14%)
Query: 129 AMDMYTYGTLLNCYCQELMADKALDLFDKMNELGYV-TSLNFNNLMTLFMKLGQPLKVHQ 187
+ YTY T+++ Y + +A + F +M E G V T++ FN ++ ++ GQ +V
Sbjct: 295 CLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTS 354
Query: 188 LVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVE----------------- 230
L+ MK P TY+ ++ + ND++ F++MK +
Sbjct: 355 LMKTMKLHCAP-DTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFS 413
Query: 231 ---------------DEDKIEWQTYSNLAV--IYVKAEQFEKAESMLRKLERKVKPRPRE 273
D+D +E Y+ A+ +YV+AE EK+ S ++ E
Sbjct: 414 IRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRF-HVAGNMSSE 472
Query: 274 AYLAAI--YVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLWYFL 331
Y A I Y + +A +F Q+V R Y+ +I Y + + EK +L+ +
Sbjct: 473 GYSANIDAYGERGYLSEAERVFICC-QEVNKRTVIEYNVMIKAYGISKSCEKACELFESM 531
Query: 332 KSVSPGINESYLIMICALKRLNDMKGLIKCFKE------WESRCERYDLRLVSTVISAYL 385
S ++ + + DM +C+ E + S C Y VIS+++
Sbjct: 532 MSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPY-----CAVISSFV 586
Query: 386 SEDMGEEAALVFKEAMKKSKGPFFKIRERFMVFFLEKRQLDGAVSHLEA 434
A V+KE ++ + P + + F + + A+S++EA
Sbjct: 587 KLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEA 635
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 114/248 (45%), Gaps = 22/248 (8%)
Query: 73 LRKYRRFQDALEVMEWMEKRNSKFPRTYN-HAVHLDLVCKTKGVVAAESYFNSLPPPAMD 131
L++ ++ A+E+ EW + + Y + +H +++ + G Y SL +
Sbjct: 161 LKEQIHWERAVEIFEWFKSKG-----CYELNVIHYNIMLRILGKACKWRYVQSLWDEMIR 215
Query: 132 M------YTYGTLLNCYCQELMADKALDLFDKMNELGYVTS-LNFNNLMTLFMKLGQPLK 184
TYGTL++ Y + + AL KM+++G + ++ ++ K + K
Sbjct: 216 KGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQK 275
Query: 185 VHQL-----VDEMK-QRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQ 238
+ DE K ++ +S++TY+ +++Y + E F++M +E+
Sbjct: 276 AEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRM-LEEGIVPTTV 334
Query: 239 TYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPRE-AYLAAIYVKDNKFKKAGEMFQKL- 296
T++ + IY Q + S+++ ++ P R L +++ K+N ++AG F+++
Sbjct: 335 TFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMK 394
Query: 297 EQKVRPRP 304
+ ++P P
Sbjct: 395 DDGLKPDP 402
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 70/149 (46%), Gaps = 1/149 (0%)
Query: 131 DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTSLNFNNLMTLFMKLGQPLKVHQLVD 190
D+YT ++N Y + M KA +FD M + G F ++ ++ K G+ + Q+
Sbjct: 682 DVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAK 741
Query: 191 EMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKA 250
+M++ I +Y++ + +A E F++M V + + T+ +L I +K
Sbjct: 742 QMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEM-VSSGIQPDDSTFKSLGTILMKL 800
Query: 251 EQFEKAESMLRKLERKVKPRPREAYLAAI 279
+KA + ++ +K R E +++ +
Sbjct: 801 GMSKKAVRKIEEIRKKEIKRGLELWISTL 829
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 127/265 (47%), Gaps = 21/265 (7%)
Query: 80 QDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAM-------DM 132
++A++V + M KR+ P T + + ++L K A++SY + M ++
Sbjct: 246 EEAIDVFQRM-KRDRCKPTTETYNLMINLYGK-----ASKSYMSWKLYCEMRSHQCKPNI 299
Query: 133 YTYGTLLNCYCQELMADKALDLFDKMNELGYVTSLN-FNNLMTLFMKLGQPLKVHQLVDE 191
TY L+N + +E + +KA ++F+++ E G + +N LM + + G P ++
Sbjct: 300 CTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSL 359
Query: 192 MKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVI--YVK 249
M+ +Y+ +++Y + E +FE+MK I S++ ++ Y K
Sbjct: 360 MQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMK---RLGIAPTMKSHMLLLSAYSK 416
Query: 250 AEQFEKAESMLRKL-ERKVKPRPREA-YLAAIYVKDNKFKKAGEMFQKLEQKVRPRPREA 307
A K E++++++ E V+P + +Y + +F K ++ ++E
Sbjct: 417 ARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIST 476
Query: 308 YHCLISLYAKTGNLEKVYKLWYFLK 332
Y+ LI++Y K G LE++ +L+ LK
Sbjct: 477 YNILINIYGKAGFLERIEELFVELK 501
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 121/266 (45%), Gaps = 12/266 (4%)
Query: 69 IVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPP 128
++K K ALE+M M ++ K T LD +CK + + A + NS
Sbjct: 422 LIKAYLKVGDLSGALEMMREMGQKGIKM-NTITLNTILDALCKERKLDEAHNLLNSAHKR 480
Query: 129 A--MDMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTSLN-FNNLMTLFMKLGQPLKV 185
+D TYGTL+ + +E +KAL+++D+M ++ +++ FN+L+ G+
Sbjct: 481 GFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELA 540
Query: 186 HQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFE--KMKVEDEDKIEWQTYSNL 243
+ DE+ + + T+++ + Y VE+ FE ++ K + T + L
Sbjct: 541 MEKFDELAESGLLPDDSTFNSIILGYCKEG---RVEKAFEFYNESIKHSFKPDNYTCNIL 597
Query: 244 AVIYVKAEQFEKAESMLRKL--ERKVKPRPREAYLAAIYVKDNKFKKAGEMFQKLEQKVR 301
K EKA + L ER+V ++A + KD K K+A ++ ++E+K
Sbjct: 598 LNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISA-FCKDKKLKEAYDLLSEMEEKGL 656
Query: 302 PRPREAYHCLISLYAKTGNLEKVYKL 327
R Y+ ISL + G L + +L
Sbjct: 657 EPDRFTYNSFISLLMEDGKLSETDEL 682
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 63/122 (51%), Gaps = 8/122 (6%)
Query: 110 CKTKGVVAAESYFN-----SLPPPAMDMYTYGTLLNCYCQELMADKALDLFDKMNELGYV 164
CK V A ++N S P D YT LLN C+E M +KAL+ F+ + E V
Sbjct: 567 CKEGRVEKAFEFYNESIKHSFKP---DNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV 623
Query: 165 TSLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIF 224
++ +N +++ F K + + + L+ EM+++ + FTY+++++ L E + +
Sbjct: 624 DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELL 683
Query: 225 EK 226
+K
Sbjct: 684 KK 685
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 125/263 (47%), Gaps = 17/263 (6%)
Query: 80 QDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAM-------DM 132
++A++V + M++ K P T + + ++L K A++SY + M ++
Sbjct: 268 EEAIDVFQRMKRDRCK-PTTETYNLMINLYGK-----ASKSYMSWKLYCEMRSHQCKPNI 321
Query: 133 YTYGTLLNCYCQELMADKALDLFDKMNELGYVTSLN-FNNLMTLFMKLGQPLKVHQLVDE 191
TY L+N + +E + +KA ++F+++ E G + +N LM + + G P ++
Sbjct: 322 CTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSL 381
Query: 192 MKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAE 251
M+ +Y+ +++Y + E +FE+MK +++ L Y KA
Sbjct: 382 MQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMK-RLGIAPTMKSHMLLLSAYSKAR 440
Query: 252 QFEKAESMLRKL-ERKVKPRPREA-YLAAIYVKDNKFKKAGEMFQKLEQKVRPRPREAYH 309
K E++++++ E V+P + +Y + +F K ++ ++E Y+
Sbjct: 441 DVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYN 500
Query: 310 CLISLYAKTGNLEKVYKLWYFLK 332
LI++Y K G LE++ +L+ LK
Sbjct: 501 ILINIYGKAGFLERIEELFVELK 523
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 12/204 (5%)
Query: 129 AMDMYTYGTLLNCYCQELMADKALDLFDKMNELGY----VTSLNFNNLMTLFMKLGQPLK 184
A D+ + TL+ Y Q +D A+D F M GY VT + + +L +
Sbjct: 236 ARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGRE 295
Query: 185 VHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLA 244
VH L++ R I ++ F +A ++ YA DL+ +FE + V S LA
Sbjct: 296 VHSLIN---HRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCN-SMISCLA 351
Query: 245 VIYVKAEQFEKAESMLRKLERKVKPRPREAYLAAIYVKDNKFKKAGEMFQKLE-QKVRPR 303
I+ K ++ + S + L+ K A L A V + ++F +++ Q V+P
Sbjct: 352 -IHGKGKEALEMFSTMESLDLKPDEITFIAVLTAC-VHGGFLMEGLKIFSEMKTQDVKPN 409
Query: 304 PREAYHCLISLYAKTGNLEKVYKL 327
+ + CLI L ++G L++ Y+L
Sbjct: 410 VKH-FGCLIHLLGRSGKLKEAYRL 432
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 100/234 (42%), Gaps = 22/234 (9%)
Query: 106 LDLVCKTKGVVAAESYFNSLPPPAMDMYTYGTLLNCYCQELMADKALDLFDKMNELGYVT 165
+D+ K K V A + F+SL P D+ T+ ++ Y Q A+KAL+L +M E T
Sbjct: 414 IDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQT 473
Query: 166 SLNFNNLMTLF--------MKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDL 217
N + +++G+ + + L ++ Q +P+ F + ++ YA +
Sbjct: 474 RPNAFTISCALVACASLAALRIGKQIHAYALRNQ--QNAVPL--FVSNCLIDMYAKCGSI 529
Query: 218 DEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPREAYLA 277
+ +F+ M ++E T+++L Y E+A + ++ R L
Sbjct: 530 SDARLVFDNMMAKNE-----VTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLV 584
Query: 278 AIYVKDNK--FKKAGEMFQKLEQ--KVRPRPREAYHCLISLYAKTGNLEKVYKL 327
+Y + + E F +++ V P P E Y CL+ L + G L +L
Sbjct: 585 VLYACSHSGMIDQGMEYFNRMKTVFGVSPGP-EHYACLVDLLGRAGRLNAALRL 637
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 175/422 (41%), Gaps = 29/422 (6%)
Query: 69 IVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTK-GVVAAESYFNSLPP 127
+VK + AL ++ + + + P ++ LD ++K + AE+ F +
Sbjct: 140 VVKSYSRLSLIDKALSIVH-LAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLE 198
Query: 128 PAM--DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTS-LNFNNLMTLFMKLGQPLK 184
+ +++TY L+ +C D AL LFDKM G + + + +N L+ + KL +
Sbjct: 199 SQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDD 258
Query: 185 VHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLA 244
+L+ M + + + +Y+ +N + EV + +M ++ TY+ L
Sbjct: 259 GFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGY-SLDEVTYNTLI 317
Query: 245 VIYVKAEQFEKAESMLRKLERKVKPRPREAYLAAIYVKDNKFKKAGEMFQKLE--QKVRP 302
Y K F +A M ++ R Y + I+ KAG M + +E ++R
Sbjct: 318 KGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIH----SMCKAGNMNRAMEFLDQMRV 373
Query: 303 R---PRE-AYHCLISLYAKTGNLEKVYKLWYFL--KSVSPGINESYLIMICALKRLNDMK 356
R P E Y L+ +++ G + + Y++ + SP + +Y +I M+
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSV-VTYNALINGHCVTGKME 432
Query: 357 GLIKCFKEWESRCERYDLRLVSTVISAYLSEDMGEEAALVFKEAMKKSKGPFFKIRERFM 416
I ++ + + D+ STV+S + +EA V +E ++K P +
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 417 VFFLEKRQLDGAVSHLEAALSEVVGDEWRPFPHVVRAFVKYYKEETDLDGVDELSKILKT 476
F E+R+ A E L VG F + A + Y E DL+ K L+
Sbjct: 493 QGFCEQRRTKEACDLYEEMLR--VGLPPDEFTYT--ALINAYCMEGDLE------KALQL 542
Query: 477 HN 478
HN
Sbjct: 543 HN 544
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/347 (19%), Positives = 151/347 (43%), Gaps = 11/347 (3%)
Query: 69 IVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPP 128
+V L ++ + +A+ ++E M + + P + ++ +CK A + N +
Sbjct: 186 LVHGLFQHNKASEAVALVERMVVKGCQ-PDLVTYGAVINGLCKRGEPDLALNLLNKMEKG 244
Query: 129 AM--DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTSL-NFNNLMTLFMKLGQPLKV 185
+ D+ Y T+++ C+ D A DLF+KM G + +N L++ G+
Sbjct: 245 KIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDA 304
Query: 186 HQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAV 245
+L+ +M ++NI ++A ++++ L E E+++++M + Y+ L
Sbjct: 305 SRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIK 364
Query: 246 IYVKAEQFEKAESMLRKLERKVKPRPREAYLAAI--YVKDNKFKKAGEMF-QKLEQKVRP 302
+ K ++ E+ + R++ ++ Y I + + A +F Q + V P
Sbjct: 365 GFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP 424
Query: 303 RPREAYHCLISLYAKTGNLEKVYKLWYFLKSVSPGIN-ESYLIMICALKRLNDMKGLIKC 361
Y+ L+ GN+E ++ +++ ++ +Y MI AL + ++
Sbjct: 425 DIM-TYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDL 483
Query: 362 FKEWESRCERYDLRLVSTVISAYLSEDMGEEAALVFKEAMKKSKGPF 408
F + + ++ +T++S + + + EEA +F E K GP
Sbjct: 484 FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEM--KEDGPL 528
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 128/277 (46%), Gaps = 16/277 (5%)
Query: 129 AMDMYTYGTLLNCYCQELMADKALDLFDKMNELGYVT-SLNFNNLMTLFMKLGQPLKVHQ 187
++D TY T+++ C+ +AD+A +M ++G + ++++N L+ F K+G ++
Sbjct: 158 SIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKA 217
Query: 188 LVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIY 247
LVDE+ + N+ T+ ++SY L+ ++E R M D D + T+S++
Sbjct: 218 LVDEISELNL----ITHTILLSSYYNLHAIEEAYRDM-VMSGFDPDVV---TFSSIINRL 269
Query: 248 VKAEQFEKAESMLRKLERKVKPRPREAYLAAI--YVKDNKFKKAGEMFQKLEQKVRPRPR 305
K + + +LR++E Y + K N ++ A ++ ++ + P
Sbjct: 270 CKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDL 329
Query: 306 EAYHCLISLYAKTGNL---EKVYKLWYFLKSVSPGINESYLIMICALKRLNDMKGLIKCF 362
Y L+ K G+L EK +K+ V P + +Y ++ L + D+
Sbjct: 330 VVYTVLMDGLFKAGDLREAEKTFKMLLEDNQV-PNV-VTYTALVDGLCKAGDLSSAEFII 387
Query: 363 KEWESRCERYDLRLVSTVISAYLSEDMGEEAALVFKE 399
+ + ++ S++I+ Y+ + M EEA + ++
Sbjct: 388 TQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRK 424
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 83/167 (49%), Gaps = 7/167 (4%)
Query: 134 TYGTLLNCYCQELMADKALDLFDKMNELGYVTSLN-FNNLMTLFMKLGQPLKVHQLVDEM 192
T G ++ YC+E L +M E+ +L FN+L+ F+++ + +++ M
Sbjct: 262 TCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLM 321
Query: 193 KQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQ 252
K+ N+ TY MN++++ +++ ++F++M V+ K + YS LA YV+A++
Sbjct: 322 KECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEM-VKAGVKPDAHAYSILAKGYVRAKE 380
Query: 253 FEKAESMLRKLERKVKPRPREAYLAAI---YVKDNKFKKAGEMFQKL 296
+KAE +L L V+ RP + + + A +F K+
Sbjct: 381 PKKAEELLETL--IVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKM 425
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 124/284 (43%), Gaps = 11/284 (3%)
Query: 131 DMYTYGTLLNCYCQELMADKALDLFDKMNELGY-VTSLNFNNLMTLFMKLGQPLKVHQLV 189
D+ T+ T++ E ++AL LF +M ++G +L + L+ F K +P QL
Sbjct: 530 DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLF 589
Query: 190 DEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVK 249
D M++ I + ++ + +++ + F + +E + + + TY+ + Y
Sbjct: 590 DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNL-IEGKMEPDIVTYNTMICGYCS 648
Query: 250 AEQFEKAESMLRKLERKVKP-RPREAYLAA---IYVKDNKFKKAGEMFQKLEQKVRPRPR 305
+ ++AE + L KV P P L + K+N A MF + +K
Sbjct: 649 LRRLDEAERIFELL--KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 706
Query: 306 EAYHCLISLYAKTGNLEKVYKLWYFL--KSVSPGINESYLIMICALKRLNDMKGLIKCFK 363
Y CL+ ++K+ ++E +KL+ + K +SP I SY I+I L + + F
Sbjct: 707 VTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSI-VSYSIIIDGLCKRGRVDEATNIFH 765
Query: 364 EWESRCERYDLRLVSTVISAYLSEDMGEEAALVFKEAMKKSKGP 407
+ D+ + +I Y EAAL+++ ++ P
Sbjct: 766 QAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 809
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 97/217 (44%), Gaps = 6/217 (2%)
Query: 97 PRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAM--DMYTYGTLLNCYCQELMADKALDL 154
P + + ++ +CK+ + A + D TY TL++ YC+ DKA ++
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 155 FDKMNELGY-VTSLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAA 213
+M G T + FN LM F G +L++ M + I +A T+++ + Y
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 214 LNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPRE 273
N+L I++ M + +TY NL + KA ++A + ++++ K
Sbjct: 609 RNNLKAATAIYKDMCSRGVGP-DGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVS 667
Query: 274 AYLAAI--YVKDNKFKKAGEMFQKLEQKVRPRPREAY 308
Y I ++K KF +A E+F ++ ++ +E +
Sbjct: 668 TYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 131/323 (40%), Gaps = 13/323 (4%)
Query: 92 RNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAM--DMYTYGTLLNCYCQELMAD 149
R P T + +D CK + AA +F + + D+ TY +++ +CQ
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 150 KALDLFDKMNELGY-VTSLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWM 208
+A LF +M G S+ F L+ + K G ++ + M Q + TY +
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Query: 209 NSYAALNDLDEVERIFEKM-KVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKV 267
+ DLD + +M K+ + I TY+++ K+ E+A ++ + E
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNI--FTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 268 KPRPREAY--LAAIYVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVY 325
Y L Y K + KA E+ +++ K ++ L++ + G LE
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581
Query: 326 KL--WYFLKSVSPGINESYLIMICALKRLNDMKGLIKCFKEWESRCERYDLRLVSTVISA 383
KL W K ++P ++ ++ N++K +K+ SR D + ++
Sbjct: 582 KLLNWMLAKGIAPNAT-TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 640
Query: 384 YLSEDMGEEAALVFKEAMKKSKG 406
+ +EA +F+E K KG
Sbjct: 641 HCKARNMKEAWFLFQEM--KGKG 661
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 97/217 (44%), Gaps = 6/217 (2%)
Query: 97 PRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAM--DMYTYGTLLNCYCQELMADKALDL 154
P + + ++ +CK+ + A + D TY TL++ YC+ DKA ++
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 155 FDKMNELGY-VTSLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAA 213
+M G T + FN LM F G +L++ M + I +A T+++ + Y
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 214 LNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPRE 273
N+L I++ M + +TY NL + KA ++A + ++++ K
Sbjct: 609 RNNLKAATAIYKDMCSRGVGP-DGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVS 667
Query: 274 AYLAAI--YVKDNKFKKAGEMFQKLEQKVRPRPREAY 308
Y I ++K KF +A E+F ++ ++ +E +
Sbjct: 668 TYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 131/323 (40%), Gaps = 13/323 (4%)
Query: 92 RNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAM--DMYTYGTLLNCYCQELMAD 149
R P T + +D CK + AA +F + + D+ TY +++ +CQ
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 150 KALDLFDKMNELGY-VTSLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWM 208
+A LF +M G S+ F L+ + K G ++ + M Q + TY +
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Query: 209 NSYAALNDLDEVERIFEKM-KVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKV 267
+ DLD + +M K+ + I TY+++ K+ E+A ++ + E
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNI--FTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 268 KPRPREAY--LAAIYVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVY 325
Y L Y K + KA E+ +++ K ++ L++ + G LE
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581
Query: 326 KL--WYFLKSVSPGINESYLIMICALKRLNDMKGLIKCFKEWESRCERYDLRLVSTVISA 383
KL W K ++P ++ ++ N++K +K+ SR D + ++
Sbjct: 582 KLLNWMLAKGIAPNAT-TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 640
Query: 384 YLSEDMGEEAALVFKEAMKKSKG 406
+ +EA +F+E K KG
Sbjct: 641 HCKARNMKEAWFLFQEM--KGKG 661
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 144/328 (43%), Gaps = 47/328 (14%)
Query: 111 KTKGVVAAESYFNSLPPPAMDMYTYGTLLNCYCQELMADKALDLFDKMNELGYVT----- 165
++K + AE F +P ++ ++ T+++ Y Q DKAL+LFD+M E V+
Sbjct: 121 RSKQLSIAEMLFQEMPE--RNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMV 178
Query: 166 -----SLNFNNLMTLFMKL------------------GQPLKVHQLVDEMKQRNIPMSAF 202
+ M LF ++ G+ + +L D M +RNI
Sbjct: 179 KALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNI----I 234
Query: 203 TYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRK 262
+++A + YA N +DE +++F+ M + D W T + +++ + KA + +
Sbjct: 235 SWNAMITGYAQNNRIDEADQLFQVMP--ERDFASWNT---MITGFIRNREMNKACGLFDR 289
Query: 263 LERKVKPRPREAYLAAIYVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLE 322
+ K + YV++ + ++A +F K+ + +P + +S+ + +L
Sbjct: 290 MPE--KNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTY--VSILSACSDLA 345
Query: 323 KVYKLWYFLKSVSPGINESYLIMICALKRLNDMKG-LIKCFKEWESR--CERYDLRLVST 379
+ + + +S +++ I+ AL + G LI K +++ C+R DL ++
Sbjct: 346 GLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQR-DLISWNS 404
Query: 380 VISAYLSEDMGEEAALVFKEAMKKSKGP 407
+I+ Y G+EA ++ + K P
Sbjct: 405 MIAVYAHHGHGKEAIEMYNQMRKHGFKP 432
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 113/266 (42%), Gaps = 13/266 (4%)
Query: 151 ALDLFDKMNELGYVTSLN------FNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTY 204
A L+D + E+G S N L+ LF KLG+ + + ++ +A TY
Sbjct: 210 AYGLWDLVKEIGEKESCGVLNLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTY 269
Query: 205 HAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAES---MLR 261
+ + + + +D + EKM ++ E + N+ + K + E+A S + +
Sbjct: 270 YLTLEALCKRSFMDWACSVCEKM-LKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAK 328
Query: 262 KLERKVKPRPREAYLAAIYVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNL 321
E+ + PR + A+ D A EM L + R R + + +I + N+
Sbjct: 329 TKEKSLPPRFVATLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNV 388
Query: 322 E--KVYKLWYFLKSVSPGINESYLIMICALKRLNDMKGLIKCFKEWESRCERYDLRLVST 379
+ K L K +PG N + +++ A + D+ + K ESR + D+ +
Sbjct: 389 KDAKALLLDMISKGPAPG-NAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTV 447
Query: 380 VISAYLSEDMGEEAALVFKEAMKKSK 405
+IS Y M +EA + EA KK K
Sbjct: 448 IISGYAKGGMMDEAQEILAEAKKKHK 473
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 89/201 (44%), Gaps = 5/201 (2%)
Query: 131 DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTSLNFNNLMTL-FMKLGQPLKVHQLV 189
D+ T L++ Y + ++A + F+ + G M L ++ G+P +L+
Sbjct: 418 DILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLM 477
Query: 190 DEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVK 249
EM+ + + S Y A + +YA + D + I M+ + + ++ YS Y K
Sbjct: 478 KEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYSLFVEAYGK 537
Query: 250 AEQFEKAESMLRKLERKVKPRPRE---AYLAAIYVKDNKFKKAGEMFQKLEQKVRPRPRE 306
A Q +KA+S ++ RK+ +P + A L Y +N KA + +LE+
Sbjct: 538 AGQVDKAKSNFDEM-RKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKDGIEIGVI 596
Query: 307 AYHCLISLYAKTGNLEKVYKL 327
Y L+ A G +E+ +L
Sbjct: 597 TYTVLVDWMANLGLIEEAEQL 617
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 115/268 (42%), Gaps = 12/268 (4%)
Query: 66 LMRIVKELRKYRRFQDALEVMEWMEKRNSKFPR--TYNHAVHLDLVCKT--KGVVAAESY 121
++ + E K R+Q AL++ + K++ PR TY + CK + + E
Sbjct: 111 VLEALDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVM 170
Query: 122 FNSLPPPAMDMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTS--LNFNNLMTLFMKL 179
+ P +D+YT +L++ Y + + DKA + M + F L++ KL
Sbjct: 171 LSEGLKPTIDVYT--SLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKL 228
Query: 180 GQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKI-EWQ 238
G+ V +V EM + S TY+ ++ Y +E+E + M +ED D + +
Sbjct: 229 GRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADM-IEDGDSLPDVC 287
Query: 239 TYSNLAVIYVKAEQFEKAESMLRKLE-RKVKPRPREAYLAAI-YVKDNKFKKAGEMFQKL 296
T +++ Y K ES + + V+P + + + K +KK + +
Sbjct: 288 TLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFM 347
Query: 297 EQKVRPRPREAYHCLISLYAKTGNLEKV 324
E++ Y+ +I + K G +EK+
Sbjct: 348 EKRFFSLTTVTYNIVIETFGKAGRIEKM 375
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 119/288 (41%), Gaps = 13/288 (4%)
Query: 129 AMDMYTYGTLLNCYCQELMADKALDLFDKMNELG-YVTSLNFNNLMTLFMKLGQPLKVHQ 187
AMD+ TY T+L+ C+ M +A LF++M E + S L+ KLG +
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 501
Query: 188 LVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIY 247
L +MK++ I + TY+ ++ + + D+D + I+ M V E +YS L
Sbjct: 502 LFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADM-VSKEILPTPISYSILVNAL 560
Query: 248 VK----AEQFEKAESMLRKLERKVKPRPREA-YLAAIYVKDNKFKKAGEMFQKLEQKVRP 302
AE F + M+ K +KP + Y + +K+ +
Sbjct: 561 CSKGHLAEAFRVWDEMISK---NIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV 617
Query: 303 RPREAYHCLISLYAKTGNLEKVYKLWYFLKSVSPGINE---SYLIMICALKRLNDMKGLI 359
+Y+ LI + + N+ K + L ++ G+ +Y ++ R N MK
Sbjct: 618 PDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAE 677
Query: 360 KCFKEWESRCERYDLRLVSTVISAYLSEDMGEEAALVFKEAMKKSKGP 407
++ R D + +I+ ++S+D EA + E +++ P
Sbjct: 678 VVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 135/315 (42%), Gaps = 29/315 (9%)
Query: 47 ASETLNQYMTEGRVAGKSELMRIVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHL 106
A E +N +G G ++ L K+ +++ A EV M R+ P + + L
Sbjct: 289 AFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEM-LRSGLSPDSTTYRSLL 347
Query: 107 DLVCKTKGVVAAESYFNSLPPPAM--DMYTYGTLLNCYCQELMADKALDLFDKMNELGYV 164
CK VV E F+ + + D+ + ++++ + + DKAL F+ + E G +
Sbjct: 348 MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407
Query: 165 T-SLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERI 223
++ + L+ + + G L +EM Q+ M TY+ ++ L E +++
Sbjct: 408 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 467
Query: 224 FEKMKVEDEDKIEWQTYSNLAVI--YVKAEQFEKAESMLRKLERKVKPRPREAYLAAIYV 281
F +M E + +Y+ +I + K + A + +K++ K R R + +
Sbjct: 468 FNEMT---ERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK---RIRLDVVTYNTL 521
Query: 282 KDNKFKKAGEM-------FQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLW--YFLK 332
D F K G++ + +++ P P +Y L++ G+L + +++W K
Sbjct: 522 LDG-FGKVGDIDTAKEIWADMVSKEILPTPI-SYSILVNALCSKGHLAEAFRVWDEMISK 579
Query: 333 SVSPGINESYLIMIC 347
++ P +MIC
Sbjct: 580 NIKP------TVMIC 588
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 4/162 (2%)
Query: 69 IVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPP 128
+V K + +A V+ M K P T + CK + A F +P
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLK-PNTVGFNCLISAFCKEHRIPEAVEIFREMPRK 488
Query: 129 AM--DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVT-SLNFNNLMTLFMKLGQPLKV 185
D+YT+ +L++ C+ AL L M G V ++ +N L+ F++ G+ +
Sbjct: 489 GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEA 548
Query: 186 HQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKM 227
+LV+EM + P+ TY++ + ++D+ +FEKM
Sbjct: 549 RKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 99/209 (47%), Gaps = 11/209 (5%)
Query: 95 KFPRTYNHAVHLDLV---CKTKGVVAAESYFNSLPPPAMD--MYTYGTLLNCYCQELMAD 149
+ +T N +++ ++ C+T + AE+ + +D + Y T+++ Y
Sbjct: 407 RIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEK 466
Query: 150 KALDLFDKMNELGYV-TSLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWM 208
K L +F ++ E G+ T + + L+ L+ K+G+ K ++ MK+ + + TY +
Sbjct: 467 KGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMI 526
Query: 209 NSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVK 268
N + L D +FE M V++ K + Y+N+ + ++A +++++ K++
Sbjct: 527 NGFVKLKDWANAFAVFEDM-VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQ-KLR 584
Query: 269 PRPREAYLAAIYVKDNKFKKAGEMFQKLE 297
RP I + + K+G+M + LE
Sbjct: 585 HRPTTRTFMPII---HGYAKSGDMRRSLE 610
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 107/276 (38%), Gaps = 37/276 (13%)
Query: 169 FNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMK 228
F ++ + + G + + + M+ R I ++ Y + +++YA D+DE KMK
Sbjct: 312 FGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMK 371
Query: 229 VE-----------------------------DEDK-----IEWQTYSNLAVIYVKAEQFE 254
E DE K + Y + + + E
Sbjct: 372 EEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNME 431
Query: 255 KAESMLRKLERKVKPRPREAYLAAI--YVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLI 312
+AE+++R++E + P Y + Y KK +F++L++ Y CLI
Sbjct: 432 RAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLI 491
Query: 313 SLYAKTGNLEKVYKLWYFLKSVSPGIN-ESYLIMICALKRLNDMKGLIKCFKEWESRCER 371
+LY K G + K ++ +K N ++Y +MI +L D F++ +
Sbjct: 492 NLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMK 551
Query: 372 YDLRLVSTVISAYLSEDMGEEAALVFKEAMKKSKGP 407
D+ L + +ISA+ + A KE K P
Sbjct: 552 PDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRP 587
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 90/205 (43%), Gaps = 4/205 (1%)
Query: 124 SLPPPAMDMYTYGTLLNCYCQELMADKALDLFDKMNELGY-VTSLNFNNLMTLFMKLGQP 182
+L + + +TY ++ Y KA + F ++ G V + L+ K G+
Sbjct: 651 TLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRM 710
Query: 183 LKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSN 242
+ EM RNIP ++F Y+ ++ +A D+ E + ++MK E K + TY++
Sbjct: 711 QSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGV-KPDIHTYTS 769
Query: 243 LAVIYVKAEQFEKAESMLRKLER-KVKPRPRE-AYLAAIYVKDNKFKKAGEMFQKLEQKV 300
KA +A + ++E VKP + L + + + +KA +++++
Sbjct: 770 FISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMG 829
Query: 301 RPRPREAYHCLISLYAKTGNLEKVY 325
+ YHCL++ ++ + Y
Sbjct: 830 IKPDKAVYHCLLTSLLSRASIAEAY 854
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 131/311 (42%), Gaps = 12/311 (3%)
Query: 165 TSLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIF 224
+ ++F L+T + KLG +++ + + + +Y A M SY + E IF
Sbjct: 145 SEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIF 204
Query: 225 EKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKL--ERKVKPRP-REAYLAAIYV 281
+M+ + TY + +V+ ++F++AE + L E+K +P ++ Y IY+
Sbjct: 205 RRMQSSGPEP-SAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYM 263
Query: 282 --KDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLWYFLKSVSPGIN 339
K ++KA ++F + K P+ Y+ L+S + K+Y + P +
Sbjct: 264 YKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQ-RSDIQPDV- 321
Query: 340 ESYLIMICALKRLNDMKGLIKCFKEWESRCERYDLRLVSTVISAYLSEDMGEEAALVFKE 399
SY ++I A R + + F+E R + + ++ A+ M E+A VFK
Sbjct: 322 VSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKS 381
Query: 400 AMKKSKGPFFKIRERFMVFFLEKRQLDGAVSHLEAALSEVVGDEWRPFPHVVRAFVKYYK 459
+ P + ++ ++GA E + D + P +K Y
Sbjct: 382 MRRDRIFPDLWSYTTMLSAYVNASDMEGA----EKFFKRIKVDGFEPNIVTYGTLIKGYA 437
Query: 460 EETDLDGVDEL 470
+ D++ + E+
Sbjct: 438 KANDVEKMMEV 448
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/312 (19%), Positives = 137/312 (43%), Gaps = 15/312 (4%)
Query: 96 FPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAM--DMYTYGTLLNCYCQELMADKALD 153
P + + L + K+K S F+ + + D+Y+Y ++NC C+ AL
Sbjct: 66 LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALS 125
Query: 154 LFDKMNELGYVTS-LNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYA 212
+ KM + GY + ++L+ F + + LV +M++ Y+ ++
Sbjct: 126 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 185
Query: 213 ALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKL-ERKVKPRP 271
+ +++ +F++M+ D + + TY++L + ++ A ++R + R + P
Sbjct: 186 KIGLVNDAVELFDRME-RDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNV 244
Query: 272 RE-AYLAAIYVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLWYF 330
+ ++VK+ KF +A ++++++ ++ Y+ LI+ G +++ ++
Sbjct: 245 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 304
Query: 331 L--KSVSPGINESYLIMI---CALKRLNDMKGLIKCFKEWESRCERYDLRLVSTVISAYL 385
+ K P + +Y +I C KR+++ K F+E R D +T+I Y
Sbjct: 305 MVTKGCLPDV-VTYNTLINGFCKSKRVDEGT---KLFREMAQRGLVGDTITYNTIIQGYF 360
Query: 386 SEDMGEEAALVF 397
+ A +F
Sbjct: 361 QAGRPDAAQEIF 372
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/337 (19%), Positives = 149/337 (44%), Gaps = 11/337 (3%)
Query: 78 RFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAM--DMYTY 135
R DA++++ ME+ + P + +D CK V A F+ + + D TY
Sbjct: 154 RVFDAIDLVSKMEEMGFR-PDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTY 212
Query: 136 GTLLNCYCQELMADKALDLFDKMNELGYVTS-LNFNNLMTLFMKLGQPLKVHQLVDEMKQ 194
+L+ C A L M V + + F ++ +F+K G+ + +L +EM +
Sbjct: 213 NSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTR 272
Query: 195 RNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFE 254
R + FTY++ +N +DE +++ + M V + TY+ L + K+++ +
Sbjct: 273 RCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM-VTKGCLPDVVTYNTLINGFCKSKRVD 331
Query: 255 KAESMLRKLERKVKPRPREAYLAAI--YVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLI 312
+ + R++ ++ Y I Y + + A E+F +++ RP R Y L+
Sbjct: 332 EGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS--RPNIR-TYSILL 388
Query: 313 SLYAKTGNLEKVYKLWYFLKSVSPGIN-ESYLIMICALKRLNDMKGLIKCFKEWESRCER 371
+EK L+ ++ ++ +Y I+I + ++ +++ F+ + +
Sbjct: 389 YGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLK 448
Query: 372 YDLRLVSTVISAYLSEDMGEEAALVFKEAMKKSKGPF 408
D+ +T+IS + + +++ L++++ + P
Sbjct: 449 PDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLPL 485
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 111/260 (42%), Gaps = 17/260 (6%)
Query: 69 IVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPP 128
++KE R +R+ +D WM+ + S P + + L L + + AE F +
Sbjct: 161 VLKEQRGWRQVRD---FFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEV 217
Query: 129 AM--DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTSLN-FNNLMTLFMKLGQPLKV 185
D GT+L Y + L + + E + S + +N +++ K KV
Sbjct: 218 GCEPDAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKV 277
Query: 186 HQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMK----VEDEDKIEWQTYS 241
L EM + +P + FTY ++SYA +E + F +MK V +E TYS
Sbjct: 278 IDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEE-----VTYS 332
Query: 242 NLAVIYVKAEQFEKAESMLRKLERK--VKPRPREAYLAAIYVKDNKFKKAGEMFQKLEQK 299
++ + VKA +EKA + + + V A + ++Y K + KA +F +E+
Sbjct: 333 SVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERN 392
Query: 300 VRPRPREAYHCLISLYAKTG 319
P +I +Y K G
Sbjct: 393 KIPADEVIRGLIIRIYGKLG 412
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 131/311 (42%), Gaps = 12/311 (3%)
Query: 165 TSLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIF 224
+ ++F L+T + KLG +++ + + + +Y A M SY + E IF
Sbjct: 138 SEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIF 197
Query: 225 EKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKL--ERKVKPRP-REAYLAAIYV 281
+M+ + TY + +V+ ++F++AE + L E+K +P ++ Y IY+
Sbjct: 198 RRMQSSGPEP-SAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYM 256
Query: 282 --KDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLWYFLKSVSPGIN 339
K ++KA ++F + K P+ Y+ L+S + K+Y + P +
Sbjct: 257 YKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQ-RSDIQPDV- 314
Query: 340 ESYLIMICALKRLNDMKGLIKCFKEWESRCERYDLRLVSTVISAYLSEDMGEEAALVFKE 399
SY ++I A R + + F+E R + + ++ A+ M E+A VFK
Sbjct: 315 VSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKS 374
Query: 400 AMKKSKGPFFKIRERFMVFFLEKRQLDGAVSHLEAALSEVVGDEWRPFPHVVRAFVKYYK 459
+ P + ++ ++GA E + D + P +K Y
Sbjct: 375 MRRDRIFPDLWSYTTMLSAYVNASDMEGA----EKFFKRIKVDGFEPNIVTYGTLIKGYA 430
Query: 460 EETDLDGVDEL 470
+ D++ + E+
Sbjct: 431 KANDVEKMMEV 441
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 53.1 bits (126), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 68/148 (45%), Gaps = 3/148 (2%)
Query: 92 RNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAM--DMYTYGTLLNCYCQELMAD 149
R S FP T + +D CK V A+ +S+ D+ T+ TL+N YC+ D
Sbjct: 3 RWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVD 62
Query: 150 KALDLFDKMNELGYV-TSLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWM 208
+++F +M+ G V ++ + L+ F ++G L++EM + T+H +
Sbjct: 63 NGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCML 122
Query: 209 NSYAALNDLDEVERIFEKMKVEDEDKIE 236
+ +L + I E ++ ++ +E
Sbjct: 123 AGLCSKKELRKAFAILEDLQKSEDHHLE 150
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 12/208 (5%)
Query: 69 IVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYF-----N 123
++ K R D + E M+ + P + ++ CK + ++ N
Sbjct: 303 MIDGFGKVGRLDDTVCFFEEMKDMCCE-PDVITYNALINCFCKFGKLPIGLEFYREMKGN 361
Query: 124 SLPPPAMDMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTS-LNFNNLMTLFMKLGQP 182
L P ++ +Y TL++ +C+E M +A+ + M +G V + + +L+ K+G
Sbjct: 362 GLKP---NVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNL 418
Query: 183 LKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSN 242
+L +EM Q + + TY A ++ + E E +F KM +Y+
Sbjct: 419 SDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP-NLASYNA 477
Query: 243 LAVIYVKAEQFEKAESMLRKLE-RKVKP 269
L +VKA+ ++A +L +L+ R +KP
Sbjct: 478 LIHGFVKAKNMDRALELLNELKGRGIKP 505
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 119/270 (44%), Gaps = 25/270 (9%)
Query: 99 TYNHAVHLDLVCKTKGVVAAESYFNSLPPPAMDMYTYGTLLNCYCQELMADKALDLFDKM 158
TY A + K + A F+ +P ++ + +L++ + Q +AD+A+ +F +M
Sbjct: 142 TYVQAALVTFYSKCGDMEGARQVFDRMPEKSI--VAWNSLVSGFEQNGLADEAIQVFYQM 199
Query: 159 NELGY-VTSLNFNNLMTLFMKLGQPLK---VHQ-LVDEMKQRNIPMSAFTYHAWMNSYAA 213
E G+ S F +L++ + G VHQ ++ E N+ + A +N Y+
Sbjct: 200 RESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGT----ALINLYSR 255
Query: 214 LNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPRE 273
D+ + +F+KMK + + W + + Y ++A + K+E P P
Sbjct: 256 CGDVGKAREVFDKMK--ETNVAAW---TAMISAYGTHGYGQQAVELFNKMEDDCGPIPNN 310
Query: 274 AYLAAIY---VKDNKFKKAGEMFQKLEQKVRPRPREAYH-CLISLYAKTGNLEKVYKLWY 329
A+ ++ +++++ + R P +H C++ + + G L++ YK +
Sbjct: 311 VTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIH 370
Query: 330 FL----KSVSPGINESYLIMICALKRLNDM 355
L K+ +P + + ++ C + R D+
Sbjct: 371 QLDATGKATAPALWTA-MLGACKMHRNYDL 399
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 126/279 (45%), Gaps = 8/279 (2%)
Query: 131 DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTSL-NFNNLMTLFMKLGQPLKVHQLV 189
D++TY TL++ YC++ M +AL + D+M G ++ +N+ + F + G+ + +L
Sbjct: 237 DIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLF 296
Query: 190 DEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVK 249
E+K ++ + TY ++ Y +ND+DE R+ E M+ TY+++ +
Sbjct: 297 REIKD-DVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSP-GVVTYNSILRKLCE 354
Query: 250 AEQFEKAESMLRKLE-RKVKPRPREA-YLAAIYVKDNKFKKAGEMFQKLEQKVRPRPREA 307
+ +A +L ++ +K++P L Y K A ++ +K+ + +
Sbjct: 355 DGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYS 414
Query: 308 YHCLISLYAKTGNLEKVYKLWYFL--KSVSPGINESYLIMICALKRLNDMKGLIKCFKEW 365
Y LI + K LE + + + K SPG +Y ++ N + K +E+
Sbjct: 415 YKALIHGFCKVLELENAKEELFSMIEKGFSPGY-ATYSWLVDGFYNQNKQDEITKLLEEF 473
Query: 366 ESRCERYDLRLVSTVISAYLSEDMGEEAALVFKEAMKKS 404
E R D+ L +I + + A ++F+ KK
Sbjct: 474 EKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKG 512
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 121/288 (42%), Gaps = 31/288 (10%)
Query: 23 EANRPAKKQGLYQRLSEK---EKTGLSASETLNQYMTEGRVAGKSELMRIVKELRKYRRF 79
+A+ P K L+ R+ ++ +++ S + LN + EG +
Sbjct: 124 KAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGL-------------------Y 164
Query: 80 QDALEVMEWMEKRNSKF---PRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAM--DMYT 134
LE +++ N P + + + +CK + V A F +P D YT
Sbjct: 165 HRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYT 224
Query: 135 YGTLLNCYCQELMADKALDLFDKMNELGYVTS-LNFNNLMTLFMKLGQPLKVHQLVDEMK 193
Y TL++ C+E D+A+ L D+M G S + +N L+ K G +V +LVD M
Sbjct: 225 YCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMF 284
Query: 194 QRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQF 253
+ + TY+ ++ LD+ + E+M V + TY L VK +
Sbjct: 285 LKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERM-VSSKCIPNDVTYGTLINGLVKQRRA 343
Query: 254 EKAESMLRKLERKVKPRPREAY--LAAIYVKDNKFKKAGEMFQKLEQK 299
A +L +E + + Y L + K+ K ++A +++K+ +K
Sbjct: 344 TDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEK 391
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 135/318 (42%), Gaps = 8/318 (2%)
Query: 97 PRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAMDM--YTYGTLLNCYCQELMADKALDL 154
P Y +++ +D + A N + +++ Y T++N C+ KA +L
Sbjct: 511 PNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAREL 570
Query: 155 FDKMNELG--YVTSLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYA 212
M E V+ +++N+++ F K G+ +EM I + TY + MN
Sbjct: 571 LANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLC 630
Query: 213 ALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRK-LERKVKP-R 270
N +D+ + ++MK + K++ Y L + K E A ++ + LE + P +
Sbjct: 631 KNNRMDQALEMRDEMKNKGV-KLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQ 689
Query: 271 PREAYLAAIYVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLWYF 330
P L + + A ++++K+ + Y LI K GNL +L+
Sbjct: 690 PIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTE 749
Query: 331 LKSVSPGINE-SYLIMICALKRLNDMKGLIKCFKEWESRCERYDLRLVSTVISAYLSEDM 389
+++V +E Y +++ L + ++K F+E + ++ + + VI+ + E
Sbjct: 750 MQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGN 809
Query: 390 GEEAALVFKEAMKKSKGP 407
+EA + E + K P
Sbjct: 810 LDEAFRLHDEMLDKGILP 827
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 89/185 (48%), Gaps = 6/185 (3%)
Query: 150 KALDLFDKMNELGYVTSL--NFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAW 207
+AL++FD + E + + L+ L K GQP + +L DEM + + + Y A
Sbjct: 106 QALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTAL 165
Query: 208 MNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKL-ERK 266
+ +Y N +D+ I +KMK + + + TYS L V A QF+ +S+ +++ ER
Sbjct: 166 LAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERL 225
Query: 267 VKPRP-REAYLAAIYVKDNKFKKAGEMFQKLEQKVRPRPRE-AYHCLISLYAKTGNLEKV 324
+ P + + + Y + +F + ++ + +P + ++S++ G ++ +
Sbjct: 226 ITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKID-M 284
Query: 325 YKLWY 329
+ WY
Sbjct: 285 MESWY 289
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 112/260 (43%), Gaps = 15/260 (5%)
Query: 69 IVKELRKYRRFQDALEVMEWMEKRNSKF---PRTYNHAVHLDLVCKTKGVVAAESYFNSL 125
+V+ LRK + ++AL ++ KR F P + + +D +CK + AE F+ +
Sbjct: 338 LVEGLRKRGKIEEALNLV----KRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRM 393
Query: 126 PPPAM--DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTSL-NFNNLMTLFMKLGQP 182
+ + TY L++ +C+ D AL +M + G S+ +N+L+ K G
Sbjct: 394 GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDI 453
Query: 183 LKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSN 242
+ EM + + + TY + M Y + +++ R++ +M + + T++
Sbjct: 454 SAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIY-TFTT 512
Query: 243 LAVIYVKAEQFEKAESMLRKL-ERKVKPRPREAYLAAI--YVKDNKFKKAGEMFQKLEQK 299
L +A A + ++ E VKP R Y I Y ++ KA E +++ +K
Sbjct: 513 LLSGLFRAGLIRDAVKLFNEMAEWNVKPN-RVTYNVMIEGYCEEGDMSKAFEFLKEMTEK 571
Query: 300 VRPRPREAYHCLISLYAKTG 319
+Y LI TG
Sbjct: 572 GIVPDTYSYRPLIHGLCLTG 591
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 124/291 (42%), Gaps = 17/291 (5%)
Query: 130 MDMYTYGTLLNCYCQELMADKALDLFDKMNELG-------YVTSLNFNNLMTLFMKLGQP 182
+++ + +L++ +C+ D+AL +F M G + T + + + F K +P
Sbjct: 494 LNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKP 553
Query: 183 LKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSN 242
QL D M++ I + ++ + +++ + F + +E + + + TY+
Sbjct: 554 TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNL-IEGKMEPDIVTYNT 612
Query: 243 LAVIYVKAEQFEKAESMLRKLERKVKP-RPREAYLAA---IYVKDNKFKKAGEMFQKLEQ 298
+ Y + ++AE + L KV P P L + K+N A MF + +
Sbjct: 613 MICGYCSLRRLDEAERIFELL--KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAE 670
Query: 299 KVRPRPREAYHCLISLYAKTGNLEKVYKLWYFL--KSVSPGINESYLIMICALKRLNDMK 356
K Y CL+ ++K+ ++E +KL+ + K +SP I SY I+I L + +
Sbjct: 671 KGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSI-VSYSIIIDGLCKRGRVD 729
Query: 357 GLIKCFKEWESRCERYDLRLVSTVISAYLSEDMGEEAALVFKEAMKKSKGP 407
F + D+ + +I Y EAAL+++ ++ P
Sbjct: 730 EATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 780
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 96/203 (47%), Gaps = 6/203 (2%)
Query: 131 DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTSL-NFNNLMTLFMKLGQPLKVHQLV 189
D+ TY +L++ + LM ++ L LFD+M G + ++N LM+ + KLG+ + +++
Sbjct: 82 DVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKIL 141
Query: 190 DE-MKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYV 248
E + + TY+ +++ D +F+ +K K E TY+ L
Sbjct: 142 HEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLK--SRVKPELMTYNILINGLC 199
Query: 249 KAEQFEKAESMLRKLERKVKPRPREAY--LAAIYVKDNKFKKAGEMFQKLEQKVRPRPRE 306
K+ + + M+R+L++ Y + +Y K + +K ++F K++++
Sbjct: 200 KSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGF 259
Query: 307 AYHCLISLYAKTGNLEKVYKLWY 329
A ++S KTG E+ Y+ +
Sbjct: 260 ANCAVVSALIKTGRAEEAYECMH 282
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 155/337 (45%), Gaps = 26/337 (7%)
Query: 78 RFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFN-----SLPPPAMDM 132
+ +DA+ V + M + + T +++ ++ CK+ +V AE F+ SL P D
Sbjct: 346 QIRDAVRVHDNMIEIGVRTNTTICNSL-INGYCKSGQLVEAEQIFSRMNDWSLKP---DH 401
Query: 133 YTYGTLLNCYCQELMADKALDLFDKMNELGYV-TSLNFNNLMTLFMKLGQPLKVHQLVDE 191
+TY TL++ YC+ D+AL L D+M + V T + +N L+ + ++G V L
Sbjct: 402 HTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKM 461
Query: 192 MKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVED--EDKIEWQTYSNLAVIYVK 249
M +R + + + + L D +E +++E + D I T + + K
Sbjct: 462 MLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTI---TLNVMISGLCK 518
Query: 250 AEQFEKAESMLRKLER-KVKPRPRE-AYLAAIYVKDNKFKKAGEMFQKLEQKVRPRPREA 307
E+ +A+ +L + + KP + L+ Y K K+A + + +E+K E
Sbjct: 519 MEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEM 578
Query: 308 YHCLISLYAKTGNLEKVYKLWYFLKS--VSPGINESYLIMI---CALKRLNDMKGLIKCF 362
Y+ LIS K +L KV L L++ ++P + +Y +I C + ++ K CF
Sbjct: 579 YNTLISGAFKYRHLNKVADLVIELRARGLTPTV-ATYGALITGWCNIGMID--KAYATCF 635
Query: 363 KEWESRCERYDLRLVSTVISAYLSEDMGEEAALVFKE 399
+ E ++ + S + ++ D +EA L+ ++
Sbjct: 636 EMIEKGIT-LNVNICSKIANSLFRLDKIDEACLLLQK 671
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 120/280 (42%), Gaps = 19/280 (6%)
Query: 131 DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTSLN---FNNLMTLFMKLGQPLKVHQ 187
D++T ++N YC+ DKA+ +F K E LN +N+L+ + +G + +
Sbjct: 224 DVFTCSIVVNAYCRSGNVDKAM-VFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTR 282
Query: 188 LVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIY 247
++ M +R + + TY + + Y ++E E +FE +K E + + Y L Y
Sbjct: 283 VLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLK-EKKLVADQHMYGVLMDGY 341
Query: 248 VKAEQFEKAESMLRKLERKVKPRPREAYLAAI---YVKDNKFKKAGEMFQKLEQKVRPRP 304
+ Q A + + ++ R ++ Y K + +A ++F ++
Sbjct: 342 CRTGQIRDAVRVHDNM-IEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPD 400
Query: 305 REAYHCLISLYAKTGNLEKVYKLWYFL--KSVSPGINESYLIMICALKRLNDMKGLIKCF 362
Y+ L+ Y + G +++ KL + K V P + +Y I++ R+ ++ +
Sbjct: 401 HHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTV-MTYNILLKGYSRIGAFHDVLSLW 459
Query: 363 KEWESRCERYDLRLVSTVISAYLSEDMGEEAALVFKEAMK 402
K R D ST++ A +G+ F EAMK
Sbjct: 460 KMMLKRGVNADEISCSTLLEALFK--LGD-----FNEAMK 492
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 148/365 (40%), Gaps = 50/365 (13%)
Query: 80 QDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAM--DMYTYGT 137
+ A +V E M+KR+ + Y + + + + + A FN + + ++ Y T
Sbjct: 252 EKACQVFEDMKKRHCRRDE-YTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNT 310
Query: 138 LLNCYCQELMADKALDLFDKMNELG-----YVTSLNFNNLMTLFMKLGQPLKVHQLVDEM 192
L+ + M DKA+ +F +M E G Y SL L+ L + GQ +++ +V E+
Sbjct: 311 LMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSL----LLNLLVAEGQLVRLDGVV-EI 365
Query: 193 KQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQ 252
+R + ++Y + + + L + E R+F M W VK E+
Sbjct: 366 SKRYMTQGIYSY--LVRTLSKLGHVSEAHRLFCDM---------WS-------FPVKGER 407
Query: 253 FEKAESMLRKLERKVKPRPREAYLAAIYVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLI 312
+ SML L K +A EM K+ +K Y+ +
Sbjct: 408 -DSYMSMLESL-----------------CGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVF 449
Query: 313 SLYAKTGNLEKVYKLWYFLKSVSPGINE-SYLIMICALKRLNDMKGLIKCFKEWESRCER 371
S K + ++ L+ +K P + +Y I+I + R+ ++ I F+E E +
Sbjct: 450 SALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCK 509
Query: 372 YDLRLVSTVISAYLSEDMGEEAALVFKEAMKKSKGPFFKIRERFMVFFLEKRQLDGAVSH 431
D+ +++I+ +EA + FKE +K P M F + +++ A S
Sbjct: 510 PDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSL 569
Query: 432 LEAAL 436
E L
Sbjct: 570 FEEML 574
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 94/202 (46%), Gaps = 4/202 (1%)
Query: 134 TYGTLLNCYCQELMADKALDLFDKMNELGYVT-SLNFNNLMTLFMKLGQPLKVHQLVDEM 192
+Y ++L C +A+++ K++E G VT ++ +N + + KL Q +H L ++M
Sbjct: 409 SYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKM 468
Query: 193 KQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQ 252
K+ FTY+ + S+ + ++DE IFE+++ D K + +Y++L K
Sbjct: 469 KKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSD-CKPDIISYNSLINCLGKNGD 527
Query: 253 FEKAESMLRKLERKVKPRPREAY--LAAIYVKDNKFKKAGEMFQKLEQKVRPRPREAYHC 310
++A ++++ K Y L + K + + A +F+++ K Y+
Sbjct: 528 VDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNI 587
Query: 311 LISLYAKTGNLEKVYKLWYFLK 332
L+ K G + L+ +K
Sbjct: 588 LLDCLEKNGRTAEAVDLYSKMK 609
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 79/144 (54%), Gaps = 7/144 (4%)
Query: 129 AMDMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTSLN-FNNLMTLFMKLGQPLKVHQ 187
++D ++GTL++ Y +E ++AL+++D M ++ ++L +N+++ K G
Sbjct: 463 SLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEA 522
Query: 188 LVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDK-IEWQTYSNLAVI 246
+V+ M+ ++I TY+ +N +++E + I KM+ +D +K + T++ +
Sbjct: 523 VVNAMEIKDI----VTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINH 578
Query: 247 YVKAEQFEKAESMLR-KLERKVKP 269
K +EKA+ +L+ +ER V P
Sbjct: 579 LCKFGSYEKAKEVLKFMVERGVVP 602
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 152/370 (41%), Gaps = 30/370 (8%)
Query: 37 LSEKEKTGL--SASETLNQYMTEGRVAGKSELMRIVKELRKYRRFQDALEVMEWM-EKRN 93
LS KTG A NQ +G ++ L K +F AL + + M +KR
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR- 428
Query: 94 SKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPA--MDMYTYGTLLNCYCQELMADKA 151
P + H L +C+ ++ A S +SL +D+ Y +++ Y + ++A
Sbjct: 429 -ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487
Query: 152 LDLFDKMNELGYVTSL-NFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNS 210
L+LF + E G S+ FN+L+ + K + +++D +K + S +Y M++
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547
Query: 211 YAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIY---------------VKAEQFEK 255
YA + ++ + +MK E TYS VI+ ++ FEK
Sbjct: 548 YANCGNTKSIDELRREMKAEGIPPTN-VTYS---VIFKGLCRGWKHENCNHVLRERIFEK 603
Query: 256 AESMLRKLERKVKPRPREAYLAAI-YVKDNKFKKAGEMFQKLEQKVRPRPREA-YHCLIS 313
+ LR +E + P + Y I Y+ K +F ++ + A Y+ LI
Sbjct: 604 CKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILID 663
Query: 314 LYAKTGNLEKVYKLWYFLKSVSPGINE-SYLIMICALKRLNDMKGLIKCFKEWESRCERY 372
G + K Y L+ + +++ +Y +I A D + +K F + R
Sbjct: 664 SLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNV 723
Query: 373 DLRLVSTVIS 382
+R S VI+
Sbjct: 724 SIRDYSAVIN 733
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 152/370 (41%), Gaps = 30/370 (8%)
Query: 37 LSEKEKTGL--SASETLNQYMTEGRVAGKSELMRIVKELRKYRRFQDALEVMEWM-EKRN 93
LS KTG A NQ +G ++ L K +F AL + + M +KR
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR- 428
Query: 94 SKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPA--MDMYTYGTLLNCYCQELMADKA 151
P + H L +C+ ++ A S +SL +D+ Y +++ Y + ++A
Sbjct: 429 -ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487
Query: 152 LDLFDKMNELGYVTSL-NFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNS 210
L+LF + E G S+ FN+L+ + K + +++D +K + S +Y M++
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547
Query: 211 YAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIY---------------VKAEQFEK 255
YA + ++ + +MK E TYS VI+ ++ FEK
Sbjct: 548 YANCGNTKSIDELRREMKAEGIPPTN-VTYS---VIFKGLCRGWKHENCNHVLRERIFEK 603
Query: 256 AESMLRKLERKVKPRPREAYLAAI-YVKDNKFKKAGEMFQKLEQKVRPRPREA-YHCLIS 313
+ LR +E + P + Y I Y+ K +F ++ + A Y+ LI
Sbjct: 604 CKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILID 663
Query: 314 LYAKTGNLEKVYKLWYFLKSVSPGINE-SYLIMICALKRLNDMKGLIKCFKEWESRCERY 372
G + K Y L+ + +++ +Y +I A D + +K F + R
Sbjct: 664 SLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNV 723
Query: 373 DLRLVSTVIS 382
+R S VI+
Sbjct: 724 SIRDYSAVIN 733
>AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:20791259-20792314 FORWARD
LENGTH=351
Length = 351
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 71/136 (52%), Gaps = 5/136 (3%)
Query: 133 YTYGTLLNCYCQELMADKALDLFDKM--NELGYVTSLNFNNLMTLFMKLGQPLKVHQLVD 190
++Y TL+ C+ D AL L + M E G T + F+ ++ K + + ++V+
Sbjct: 126 HSYETLIARLCKLGRIDDALVLINDMAIGEFGLSTCV-FHPILNTLTKKNRIEEAWRVVE 184
Query: 191 EMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKI--EWQTYSNLAVIYV 248
M+ IP+ +Y+ ++ S+ D+ E R+ KM+ E+E + + +TY L +
Sbjct: 185 LMRSHAIPVDVTSYNYFLTSHCYDGDVAEASRVLRKMEEEEEGVMSPDTRTYDALVLGAC 244
Query: 249 KAEQFEKAESMLRKLE 264
K+ + E A ++LR++E
Sbjct: 245 KSGRVEAAMAILRRME 260
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 15/206 (7%)
Query: 131 DMYTYGTLLNCYCQELMADKALDLFDKMNELGY-VTSLNFNNLMTLFMKLGQPLKVHQLV 189
D Y L++ CQ A+ + +K+ E G+ + L +N L+ LF KV++++
Sbjct: 510 DAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEML 569
Query: 190 DEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVK 249
+M++ + TY+ ++ + D + VER+ E+M+ ED TY + Y
Sbjct: 570 TDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR-EDGLDPTVTTYGAVIDAYCS 628
Query: 250 AEQFEKAESMLRKLERKVKPRPREAYLAAIY-VKDNKFKKAGEMFQKLEQK-------VR 301
+ ++A + + + K P IY + N F K G Q L K VR
Sbjct: 629 VGELDEALKLFKDMGLHSKVNPN----TVIYNILINAFSKLGNFGQALSLKEEMKMKMVR 684
Query: 302 PRPREAYHCLISLYAKTGNLEKVYKL 327
P E Y+ L + E + KL
Sbjct: 685 PNV-ETYNALFKCLNEKTQGETLLKL 709
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 133/322 (41%), Gaps = 49/322 (15%)
Query: 131 DMYTYGTLLNCYCQELMADKALDLFDKM----NELGYVT---SLNFNNLMTLFMKLGQPL 183
D+ T G L+N C+ D+AL++F++M + G V S++FN L+ K+G+
Sbjct: 328 DVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLK 387
Query: 184 KVHQLVDEMK--QRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYS 241
+ +L+ MK +R +P +A TY+ ++ Y L+ + + +MK EDE K T +
Sbjct: 388 EAEELLVRMKLEERCVP-NAVTYNCLIDGYCRAGKLETAKEVVSRMK-EDEIKPNVVTVN 445
Query: 242 ------------NLAVIY-----------------------VKAEQFEKAESMLRK-LER 265
N+AV++ EKA K LE
Sbjct: 446 TIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA 505
Query: 266 KVKPRPREAY-LAAIYVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKV 324
P + Y L + + + A + +KL++ AY+ LI L+ N EKV
Sbjct: 506 GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKV 565
Query: 325 YKLWYFLKSVSPGINE-SYLIMICALKRLNDMKGLIKCFKEWESRCERYDLRLVSTVISA 383
Y++ ++ + +Y +I + D + + + ++ + VI A
Sbjct: 566 YEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDA 625
Query: 384 YLSEDMGEEAALVFKEAMKKSK 405
Y S +EA +FK+ SK
Sbjct: 626 YCSVGELDEALKLFKDMGLHSK 647
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 15/206 (7%)
Query: 131 DMYTYGTLLNCYCQELMADKALDLFDKMNELGY-VTSLNFNNLMTLFMKLGQPLKVHQLV 189
D Y L++ CQ A+ + +K+ E G+ + L +N L+ LF KV++++
Sbjct: 510 DAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEML 569
Query: 190 DEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVK 249
+M++ + TY+ ++ + D + VER+ E+M+ ED TY + Y
Sbjct: 570 TDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR-EDGLDPTVTTYGAVIDAYCS 628
Query: 250 AEQFEKAESMLRKLERKVKPRPREAYLAAIY-VKDNKFKKAGEMFQKLEQK-------VR 301
+ ++A + + + K P IY + N F K G Q L K VR
Sbjct: 629 VGELDEALKLFKDMGLHSKVNPN----TVIYNILINAFSKLGNFGQALSLKEEMKMKMVR 684
Query: 302 PRPREAYHCLISLYAKTGNLEKVYKL 327
P E Y+ L + E + KL
Sbjct: 685 PNV-ETYNALFKCLNEKTQGETLLKL 709
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 103/243 (42%), Gaps = 48/243 (19%)
Query: 131 DMYTYGTLLNCYCQELMADKALDLFDKM----NELGYVT---SLNFNNLMTLFMKLGQPL 183
D+ T G L+N C+ D+AL++F+KM + G V S++FN L+ K+G+
Sbjct: 328 DVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLK 387
Query: 184 KVHQLVDEMK--QRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYS 241
+ +L+ MK +R P +A TY+ ++ Y L+ + + +MK EDE K T +
Sbjct: 388 EAEELLVRMKLEERCAP-NAVTYNCLIDGYCRAGKLETAKEVVSRMK-EDEIKPNVVTVN 445
Query: 242 ------------NLAVIY-----------------------VKAEQFEKAESMLRK-LER 265
N+AV++ EKA K LE
Sbjct: 446 TIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA 505
Query: 266 KVKPRPREAY-LAAIYVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKV 324
P + Y L + + + A + +KL++ AY+ LI L+ N EKV
Sbjct: 506 GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKV 565
Query: 325 YKL 327
Y++
Sbjct: 566 YEM 568
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 109/255 (42%), Gaps = 19/255 (7%)
Query: 73 LRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAMDM 132
+ Y F+D + ++ K T+N LD K+ VV+A F+ + D+
Sbjct: 150 IHMYGSFRDQASARKLFDEMPHKNLVTWNSI--LDAYAKSGDVVSARLVFDEMSER--DV 205
Query: 133 YTYGTLLNCYCQELMADKALDLFDKMNELGY-----VTSLNFNNLMTLFMKLGQPLKVHQ 187
T+ ++++ Y + +KAL++FD+M +G VT ++ L + VH+
Sbjct: 206 VTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHR 265
Query: 188 LVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIY 247
+ ++ ++P++ + ++ YA + + +F + V++ D + W N +
Sbjct: 266 YILDV---HLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMW----NAIIGG 318
Query: 248 VKAEQFEKAESMLRKLERKVKPRPREAY---LAAIYVKDNKFKKAGEMFQKLEQKVRPRP 304
+ + F + L R+ K P E L A K+A F+ L++
Sbjct: 319 LASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPK 378
Query: 305 REAYHCLISLYAKTG 319
E Y C++ + ++ G
Sbjct: 379 SEHYACMVDVLSRAG 393
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 150/338 (44%), Gaps = 18/338 (5%)
Query: 82 ALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAM--DMYTYGTLL 139
+L+ + ++ R R+ ++V + VCK V AE +S+P D+ +Y +L+
Sbjct: 40 SLKFLAYLVSRGYTPHRSSFNSV-VSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLI 98
Query: 140 NCYCQELMADKALDLFDKMN-ELGYVTS---LNFNNLMTLFMKLGQPLKVHQLVDEMKQR 195
+ +C+ A + + + G++ ++FN+L F K+ +V + M +
Sbjct: 99 DGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC 158
Query: 196 NIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEK 255
P + TY W++++ +L + F MK D T++ L Y KA E
Sbjct: 159 CSP-NVVTYSTWIDTFCKSGELQLALKSFHSMK-RDALSPNVVTFTCLIDGYCKAGDLEV 216
Query: 256 AESMLRKLERKVKPRPREAYLAAI--YVKDNKFKKAGEMFQKL-EQKVRPRPREAYHCLI 312
A S+ +++ R Y A I + K + ++A EM+ ++ E +V P Y +I
Sbjct: 217 AVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSL-VYTTII 275
Query: 313 SLYAKTGNLEKVYKLWYFLKSVSPGIN---ESYLIMICALKRLNDMKGLIKCFKEWESRC 369
+ + G+ + K + K ++ G+ +Y ++I L +K + ++ E
Sbjct: 276 DGFFQRGDSDNAMK--FLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSD 333
Query: 370 ERYDLRLVSTVISAYLSEDMGEEAALVFKEAMKKSKGP 407
D+ + +T+++AY + A ++ + +++ P
Sbjct: 334 LVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEP 371
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 115/296 (38%), Gaps = 52/296 (17%)
Query: 80 QDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAMDMYTYGTLL 139
++ LE+ E M+ K P ++V ++ +C + V AE +F+SL + + +
Sbjct: 475 EEVLEIYERMKAEGPK-PNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPE--NKASFV 531
Query: 140 NCYCQELMADKA----------------LDLFDKMNELGYVTSLN--------------- 168
YC+ ++ KA + LF + GY+ +
Sbjct: 532 KGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGR 591
Query: 169 --FNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEK 226
++ F KL + L D M +R + FTY +++Y LN+L + E +FE
Sbjct: 592 SMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFED 651
Query: 227 MKVEDEDKIEWQTYSNLAVIYVK--AEQFEKAESMLRKLERKVKPRPREAYLAAIYV--- 281
MK + K + TY+ L Y+K E E +RK RE A I +
Sbjct: 652 MK-QRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVV 710
Query: 282 ----------KDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKL 327
K N ++A E+F ++ AY LIS Y + G ++ L
Sbjct: 711 CYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTL 766
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 15/206 (7%)
Query: 131 DMYTYGTLLNCYCQELMADKALDLFDKMNELGY-VTSLNFNNLMTLFMKLGQPLKVHQLV 189
D Y L++ CQ A+ + +K+ E G+ + L +N L+ LF KV++++
Sbjct: 510 DAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEML 569
Query: 190 DEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVK 249
+M++ + TY+ ++ + D + VER+ E+M+ ED TY + Y
Sbjct: 570 TDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR-EDGLDPTVTTYGAVIDAYCS 628
Query: 250 AEQFEKAESMLRKLERKVKPRPREAYLAAIY-VKDNKFKKAGEMFQKLEQK-------VR 301
+ ++A + + + K P IY + N F K G Q L K VR
Sbjct: 629 VGELDEALKLFKDMGLHSKVNPN----TVIYNILINAFSKLGNFGQALSLKEEMKMKMVR 684
Query: 302 PRPREAYHCLISLYAKTGNLEKVYKL 327
P E Y+ L + E + KL
Sbjct: 685 PNV-ETYNALFKCLNEKTQGETLLKL 709
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 104/243 (42%), Gaps = 48/243 (19%)
Query: 131 DMYTYGTLLNCYCQELMADKALDLFDKM----NELGYVT---SLNFNNLMTLFMKLGQPL 183
D+ T G L+N C+ D+AL++F++M + G V S++FN L+ K+G+
Sbjct: 328 DVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLK 387
Query: 184 KVHQLVDEMK--QRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYS 241
+ +L+ MK +R +P +A TY+ ++ Y L+ + + +MK EDE K T +
Sbjct: 388 EAEELLVRMKLEERCVP-NAVTYNCLIDGYCRAGKLETAKEVVSRMK-EDEIKPNVVTVN 445
Query: 242 ------------NLAVIY-----------------------VKAEQFEKAESMLRK-LER 265
N+AV++ EKA K LE
Sbjct: 446 TIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA 505
Query: 266 KVKPRPREAY-LAAIYVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKV 324
P + Y L + + + A + +KL++ AY+ LI L+ N EKV
Sbjct: 506 GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKV 565
Query: 325 YKL 327
Y++
Sbjct: 566 YEM 568
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 127/291 (43%), Gaps = 12/291 (4%)
Query: 69 IVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPP 128
+++ L + + ALE++ M + P + + CK+ + A F +
Sbjct: 212 LIRGLCGVGKAEKALELLGVMSGFGCE-PDIVTYNTLIQGFCKSNELNKASEMFKDVKSG 270
Query: 129 AM---DMYTYGTLLNCYCQELMADKALDLFDKMNELG-YVTSLNFNNLMTLFMKLGQPLK 184
++ D+ TY ++++ YC+ +A L D M LG Y T++ FN L+ + K G+ L
Sbjct: 271 SVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLT 330
Query: 185 VHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLA 244
++ +M T+ + ++ Y + + + R++E+M + TYS L
Sbjct: 331 AEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAF-TYSILI 389
Query: 245 VIYVKAEQFEKAESMLRKLERK-VKPRPREAYLAAI--YVKDNKFKKAGEMFQKLEQKVR 301
+ KA +L +L K + P+P Y I + K K +A + +++E+K
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPF-MYNPVIDGFCKAGKVNEANVIVEEMEKKKC 448
Query: 302 PRPREAYHCLISLYAKTGNLEKVYKLWYFLKSV--SPGINESYLIMICALK 350
+ + LI + G + + +++ + ++ SP ++ C LK
Sbjct: 449 KPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLK 499
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 127/291 (43%), Gaps = 12/291 (4%)
Query: 69 IVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPP 128
+++ L + + ALE++ M + P + + CK+ + A F +
Sbjct: 212 LIRGLCGVGKAEKALELLGVMSGFGCE-PDIVTYNTLIQGFCKSNELNKASEMFKDVKSG 270
Query: 129 AM---DMYTYGTLLNCYCQELMADKALDLFDKMNELG-YVTSLNFNNLMTLFMKLGQPLK 184
++ D+ TY ++++ YC+ +A L D M LG Y T++ FN L+ + K G+ L
Sbjct: 271 SVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLT 330
Query: 185 VHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLA 244
++ +M T+ + ++ Y + + + R++E+M + TYS L
Sbjct: 331 AEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAF-TYSILI 389
Query: 245 VIYVKAEQFEKAESMLRKLERK-VKPRPREAYLAAI--YVKDNKFKKAGEMFQKLEQKVR 301
+ KA +L +L K + P+P Y I + K K +A + +++E+K
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPF-MYNPVIDGFCKAGKVNEANVIVEEMEKKKC 448
Query: 302 PRPREAYHCLISLYAKTGNLEKVYKLWYFLKSV--SPGINESYLIMICALK 350
+ + LI + G + + +++ + ++ SP ++ C LK
Sbjct: 449 KPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLK 499
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 89/202 (44%), Gaps = 5/202 (2%)
Query: 131 DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTS-LNFNNLMTLFMKLGQPLKVHQLV 189
+ TY L++ Y + ++A+++F++M E G + + L+ + K G +
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY 457
Query: 190 DEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVK 249
M+ + FTY +N L ++F +M V+ TY+ + ++ K
Sbjct: 458 QRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEM-VDQGCTPNLVTYNIMMDLHAK 516
Query: 250 AEQFEKAESMLRKLERKVKPRPREAYLAAIYVKDN--KFKKAGEMFQKLEQKVRPRPREA 307
A ++ A + R ++ + Y + V + ++A +F +++QK
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV 576
Query: 308 YHCLISLYAKTGNLEKVYKLWY 329
Y L+ L+ K GN+EK ++ WY
Sbjct: 577 YGLLVDLWGKAGNVEKAWQ-WY 597
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 101/226 (44%), Gaps = 12/226 (5%)
Query: 131 DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVT-SLNFNNLMTLFMKLGQPLKVHQLV 189
D TY TL++ + + D A+D++ +M G + ++ ++ K G H+L
Sbjct: 433 DRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLF 492
Query: 190 DEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVE--DEDKIEWQTYSNLAVIY 247
EM + + TY+ M+ +A + +++ M+ + DK+ TYS + +
Sbjct: 493 CEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKV---TYSIVMEVL 549
Query: 248 VKAEQFEKAESMLRKLERK--VKPRPREAYLAAIYVKDNKFKKAGEMFQK-LEQKVRPRP 304
E+AE++ ++++K + P L ++ K +KA + +Q L +RP
Sbjct: 550 GHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPN- 608
Query: 305 REAYHCLISLYAKTGNLEKVYKLWYFLKSVS--PGINESYLIMICA 348
+ L+S + + + + Y+L + ++ P + L++ C
Sbjct: 609 VPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCC 654
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 89/202 (44%), Gaps = 5/202 (2%)
Query: 131 DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTS-LNFNNLMTLFMKLGQPLKVHQLV 189
+ TY L++ Y + ++A+++F++M E G + + L+ + K G +
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY 457
Query: 190 DEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVK 249
M+ + FTY +N L ++F +M V+ TY+ + ++ K
Sbjct: 458 QRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEM-VDQGCTPNLVTYNIMMDLHAK 516
Query: 250 AEQFEKAESMLRKLERKVKPRPREAYLAAIYVKDN--KFKKAGEMFQKLEQKVRPRPREA 307
A ++ A + R ++ + Y + V + ++A +F +++QK
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV 576
Query: 308 YHCLISLYAKTGNLEKVYKLWY 329
Y L+ L+ K GN+EK ++ WY
Sbjct: 577 YGLLVDLWGKAGNVEKAWQ-WY 597
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 101/225 (44%), Gaps = 12/225 (5%)
Query: 131 DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVT-SLNFNNLMTLFMKLGQPLKVHQLV 189
D TY TL++ + + D A+D++ +M G + ++ ++ K G H+L
Sbjct: 433 DRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLF 492
Query: 190 DEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVE--DEDKIEWQTYSNLAVIY 247
EM + + TY+ M+ +A + +++ M+ + DK+ TYS + +
Sbjct: 493 CEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKV---TYSIVMEVL 549
Query: 248 VKAEQFEKAESMLRKLERK--VKPRPREAYLAAIYVKDNKFKKAGEMFQK-LEQKVRPRP 304
E+AE++ ++++K + P L ++ K +KA + +Q L +RP
Sbjct: 550 GHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPN- 608
Query: 305 REAYHCLISLYAKTGNLEKVYKLWYFLKSVS--PGINESYLIMIC 347
+ L+S + + + + Y+L + ++ P + L++ C
Sbjct: 609 VPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSC 653
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 89/202 (44%), Gaps = 5/202 (2%)
Query: 131 DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTS-LNFNNLMTLFMKLGQPLKVHQLV 189
+ TY L++ Y + ++A+++F++M E G + + L+ + K G +
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY 457
Query: 190 DEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVK 249
M+ + FTY +N L ++F +M V+ TY+ + ++ K
Sbjct: 458 QRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEM-VDQGCTPNLVTYNIMMDLHAK 516
Query: 250 AEQFEKAESMLRKLERKVKPRPREAYLAAIYVKDN--KFKKAGEMFQKLEQKVRPRPREA 307
A ++ A + R ++ + Y + V + ++A +F +++QK
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV 576
Query: 308 YHCLISLYAKTGNLEKVYKLWY 329
Y L+ L+ K GN+EK ++ WY
Sbjct: 577 YGLLVDLWGKAGNVEKAWQ-WY 597
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 101/225 (44%), Gaps = 12/225 (5%)
Query: 131 DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVT-SLNFNNLMTLFMKLGQPLKVHQLV 189
D TY TL++ + + D A+D++ +M G + ++ ++ K G H+L
Sbjct: 433 DRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLF 492
Query: 190 DEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVE--DEDKIEWQTYSNLAVIY 247
EM + + TY+ M+ +A + +++ M+ + DK+ TYS + +
Sbjct: 493 CEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKV---TYSIVMEVL 549
Query: 248 VKAEQFEKAESMLRKLERK--VKPRPREAYLAAIYVKDNKFKKAGEMFQK-LEQKVRPRP 304
E+AE++ ++++K + P L ++ K +KA + +Q L +RP
Sbjct: 550 GHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPN- 608
Query: 305 REAYHCLISLYAKTGNLEKVYKLWYFLKSVS--PGINESYLIMIC 347
+ L+S + + + + Y+L + ++ P + L++ C
Sbjct: 609 VPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSC 653
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 89/202 (44%), Gaps = 12/202 (5%)
Query: 133 YTYGTLLNCYCQELMADKALDLFDKMNELGY-VTSLNFNNLMTLFMKLGQPLKVHQLVDE 191
+TY L++ YC+ +KAL L ++M+E G+ + +L+ K + ++L E
Sbjct: 410 FTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKE 469
Query: 192 MKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAE 251
+K+ +S+ Y + + L E +F +MK + + Y+ L VKA
Sbjct: 470 LKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGP-DVYAYNALMSGMVKAG 528
Query: 252 QFEKAESMLRKLERKVKPRPREAYLAAIYVKDNKFKKAG------EMFQKLEQKVRPRPR 305
+A S+LRK+E A + + + N F + G EMF+ ++
Sbjct: 529 MINEANSLLRKMEEN----GCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDG 584
Query: 306 EAYHCLISLYAKTGNLEKVYKL 327
Y+ L+ +A G E+ ++
Sbjct: 585 VTYNTLLGCFAHAGMFEEAARM 606
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 104/252 (41%), Gaps = 9/252 (3%)
Query: 78 RFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAM--DMYTY 135
R DAL + + M K P + +D +CK+K V A N + + D+ TY
Sbjct: 166 RVYDALYMFDQMVGMGYK-PNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTY 224
Query: 136 GTLLNCYCQELMADKALDLFDKMNELG-YVTSLNFNNLMTLFMKLGQPLKVHQLVDEMKQ 194
+L++ C A + M + Y FN L+ +K G+ + + +EM +
Sbjct: 225 NSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIR 284
Query: 195 RNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFE 254
R++ TY + + LDE E +F M V + TYS L Y K+++ E
Sbjct: 285 RSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM-VSKGCFPDVVTYSILINGYCKSKKVE 343
Query: 255 KAESMLRKLERKVKPRPREAYLAAI--YVKDNKFKKAGEMFQKLE-QKVRPRPREAYHCL 311
+ ++ ++ R Y I Y + K A E+F+++ V P Y+ L
Sbjct: 344 HGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNI-ITYNVL 402
Query: 312 ISLYAKTGNLEK 323
+ G +EK
Sbjct: 403 LHGLCDNGKIEK 414
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 101/237 (42%), Gaps = 9/237 (3%)
Query: 97 PRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAMD--MYTYGTLLNCYCQELMADKALDL 154
P Y ++ CK VV A+ Y L D +TY + + +C+ D A +
Sbjct: 153 PDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKV 212
Query: 155 FDKMNELG-YVTSLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAA 213
F +M + G + +++ L+ + + + L+ +MK N + TY +++
Sbjct: 213 FKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCG 272
Query: 214 LNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRK-LERKVKPRPR 272
E +F++M E K + Y+ L + + ++A +L LE + P
Sbjct: 273 SGQKSEAMNLFKQMS-ESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVI 331
Query: 273 EAYLAAI--YVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKL 327
Y A I + K N K G + + LEQ + P Y+ LI+ +GNL+ Y+L
Sbjct: 332 -TYNALIKGFCKKNVHKAMGLLSKMLEQNLVPD-LITYNTLIAGQCSSGNLDSAYRL 386
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 160/382 (41%), Gaps = 38/382 (9%)
Query: 38 SEKEKTGLSAS-ETLNQYMTEGRVAGKSELMRIVKELRKYRRFQDALEVMEWMEKRNSKF 96
S +++GL S E + + R AG L YR FQ W EK+
Sbjct: 89 SALDQSGLRVSQEVVEDVLNRFRNAG----------LLTYRFFQ-------WSEKQ---- 127
Query: 97 PRTYNHAVH-----LDLVCKTKGVVAAESYFNSLPPPAM-DMYTYGTLLNCYCQELMADK 150
R Y H+V ++ K + N++ M ++ T+ ++ Y + D+
Sbjct: 128 -RHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDE 186
Query: 151 ALDLFDKMNELGYVTSL-NFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMN 209
A+ F+ M + +L FN L++ K K ++ + M+ R P S TY +
Sbjct: 187 AIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSK-TYSILLE 245
Query: 210 SYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKV-K 268
+ +L + +F +M ++ + TYS + I KA + ++A ++R ++ + K
Sbjct: 246 GWGKEPNLPKAREVFREM-IDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICK 304
Query: 269 PRP-REAYLAAIYVKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKL 327
P + L Y +N+ ++A + F ++E+ ++ LI + K ++ VY++
Sbjct: 305 PTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRV 364
Query: 328 WYFLKS--VSPGINESYLIMICALKRLNDMKGLIKCFKEWESRCERYDLRLVSTVISAYL 385
+KS V+P +I+ ++R + F++ CE D + VI +
Sbjct: 365 LKEMKSKGVTPNSKSCNIILRHLIER-GEKDEAFDVFRKMIKVCEP-DADTYTMVIKMFC 422
Query: 386 SEDMGEEAALVFKEAMKKSKGP 407
+ E A V+K KK P
Sbjct: 423 EKKEMETADKVWKYMRKKGVFP 444
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 101/206 (49%), Gaps = 11/206 (5%)
Query: 69 IVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPP 128
+++ LR + D L +W+ + + + + L+ + + + + A ++ S+
Sbjct: 71 VLQTLRLIKVPADGLRFFDWVSNKGFSH-KEQSFFLMLEFLGRARNLNVARNFLFSIERR 129
Query: 129 A------MDMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTS-LNFNNLMTLFMKLGQ 181
+ D Y + +L+ Y + +++ LF M ++G S L FN+L+++ +K G+
Sbjct: 130 SNGCVKLQDRY-FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGR 188
Query: 182 PLKVHQLVDEMKQR-NIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTY 240
H L DEM++ + ++T++ +N + + +DE RIF+ M++ + + TY
Sbjct: 189 TGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNP-DVVTY 247
Query: 241 SNLAVIYVKAEQFEKAESMLRKLERK 266
+ + +A + + A ++L + +K
Sbjct: 248 NTIIDGLCRAGKVKIAHNVLSGMLKK 273
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 136/310 (43%), Gaps = 15/310 (4%)
Query: 57 EGRVAGKSELMRIVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVV 116
+G V + M +VK L K R ++ LE+++ M + K P + + + + +
Sbjct: 257 DGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCK-PDVFAYTAMIKTLVSEGNLD 315
Query: 117 AAESYFNSLPPPAM--DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTSLN-FNNLM 173
A+ ++ + + D+ YGTL+ C++ ++ +LF +M + + L+
Sbjct: 316 ASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLI 375
Query: 174 TLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDED 233
F+ G+ L +++ Y+A + ++N +D+ ++F+ + +E+E
Sbjct: 376 EGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQ-VAIEEEL 434
Query: 234 KIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPREAYLAAIY----VKDNKFKKA 289
+ +++T S + V YV + ++L ++ P YL + + K A
Sbjct: 435 EPDFETLSPIMVAYVVMNRLSDFSNVLERIGE--LGYPVSDYLTQFFKLLCADEEKNAMA 492
Query: 290 GEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLWYFLKSVS--PGINESYLIMIC 347
++F L+ K Y+ L+ K G+++K L+Y ++ + P + SY I IC
Sbjct: 493 LDVFYILKTKGHGSV-SVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPD-SSSYSIAIC 550
Query: 348 ALKRLNDMKG 357
D+K
Sbjct: 551 CFVEKGDVKA 560
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 127/291 (43%), Gaps = 19/291 (6%)
Query: 69 IVKELRKYRRFQDALEVMEWMEKRNSKFPRT--YNHAVHLDLVCKTKGVVAAESYFNSLP 126
+V L + ++F + ++++ M + K P T YN +H + + A + FN +
Sbjct: 365 MVGNLGRAKQFGEINKLLDEMVRDGCK-PNTVTYNRLIHS--YGRANYLKEAMNVFNQMQ 421
Query: 127 PPAM--DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVT-SLNFNNLMTLFMKLGQPL 183
D TY TL++ + + D A+D++ +M E G + ++ ++ K G
Sbjct: 422 EAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLP 481
Query: 184 KVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVED--EDKIEWQTYS 241
H+L EM + + T++ + +A + + +++ M+ DK+ TYS
Sbjct: 482 AAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKV---TYS 538
Query: 242 NLAVIYVKAEQFEKAESMLRKLERK--VKPRPREAYLAAIYVKDNKFKKAGEMFQK-LEQ 298
+ + E+AE + +++RK V P L ++ K KA + +Q L+
Sbjct: 539 IVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQA 598
Query: 299 KVRPRPREAYHCLISLYAKTGNLEKVYKLWYFLKSVS--PGINESYLIMIC 347
+RP + L+S + + + + Y L + ++ P + L++ C
Sbjct: 599 GLRPN-VPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSC 648
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 107/259 (41%), Gaps = 10/259 (3%)
Query: 73 LRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPPAM-- 130
L + R DA E++ M + +YN +H + K V A F+ L +
Sbjct: 353 LCDFGRIDDARELLSSMAAPDVV---SYNTLMHGYI--KMGKFVEASLLFDDLRAGDIHP 407
Query: 131 DMYTYGTLLNCYCQELMADKALDLFDKMN-ELGYVTSLNFNNLMTLFMKLGQPLKVHQLV 189
+ TY TL++ C+ + A L ++M +L + + + L+ F+K G ++
Sbjct: 408 SIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVY 467
Query: 190 DEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVK 249
DEM ++ I + Y L D D+ R+ E+M D + Y+ K
Sbjct: 468 DEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCK 527
Query: 250 AEQFEKAESMLRKLERKVKPRPREAYLAAI--YVKDNKFKKAGEMFQKLEQKVRPRPREA 307
KA RK+ R Y I Y+++ +FK A ++ ++ +K
Sbjct: 528 VGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVIT 587
Query: 308 YHCLISLYAKTGNLEKVYK 326
Y LI +AK G LE+ ++
Sbjct: 588 YFVLIYGHAKAGRLEQAFQ 606
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 110/247 (44%), Gaps = 29/247 (11%)
Query: 33 LYQRLSEKEKTGLSASETLNQYMTEGRVAGKSELMRIVKELRKYRRFQDALEVMEWMEKR 92
LYQ L EK L ++ +G V G+ +KE+ K +A+E E
Sbjct: 258 LYQELKEK----------LGGFVDDGVVYGQLMKGYFMKEMEK-----EAMECYEEAVGE 302
Query: 93 NSKF---PRTYNHAVHLDLVCKTKGVVAAESYFNSLP----PP---AMDMYTYGTLLNCY 142
NSK YN+ L+ + + A F+++ PP A+++ T+ ++N Y
Sbjct: 303 NSKVRMSAMAYNYV--LEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGY 360
Query: 143 CQELMADKALDLFDKMNELGYVT-SLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSA 201
C ++A+++F +M + +L+FNNLM + +L EM+++N+
Sbjct: 361 CAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDE 420
Query: 202 FTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLR 261
+TY M++ +DE ++ M VE + Y+ L +KA + + A+S
Sbjct: 421 YTYGLLMDTCFKEGKIDEGAAYYKTM-VESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFD 479
Query: 262 KLERKVK 268
+ K+K
Sbjct: 480 MMVSKLK 486
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 107/233 (45%), Gaps = 30/233 (12%)
Query: 106 LDLVCKTKGVVAAESYFNSLPPPAMDMYTYGTLLNCY--CQELMADKALDLFDKMNELGY 163
+D+ K + A + F+ +P + +T L++ Y C EL D A LFD+M +
Sbjct: 120 VDMYAKFGKMGCARNAFDEMPHRSEVSWT--ALISGYIRCGEL--DLASKLFDQMPHVKD 175
Query: 164 VTSLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERI 223
V + +N +M F+K G +L DEM + + T+ ++ Y + D+D ++
Sbjct: 176 V--VIYNAMMDGFVKSGDMTSARRLFDEMTHKTV----ITWTTMIHGYCNIKDIDAARKL 229
Query: 224 FEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPREAYLAAIY--V 281
F+ M + + + W T + Y + +Q ++ + ++++ P + + ++ +
Sbjct: 230 FDAMP--ERNLVSWNT---MIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAI 284
Query: 282 KDNKFKKAGEMF------QKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKLW 328
D GE +KL++KV+ ++ +Y+K G +EK +++
Sbjct: 285 SDTGALSLGEWCHCFVQRKKLDKKVK-----VCTAILDMYSKCGEIEKAKRIF 332
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 98/227 (43%), Gaps = 12/227 (5%)
Query: 109 VCKTKGVVAAESYF-----NSLPPPAMDMYTYGTLLNCYCQELMADKALDLFDKMNELGY 163
+C +K V + YF NS P ++ TYG LL+ +C+ ++A L D M+ G
Sbjct: 614 MCGSKDVPDVDMYFKQYDDNSERP---NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC 670
Query: 164 -VTSLNFNNLMTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVER 222
+ ++ L+ K+G+ + ++ EM + P + +TY + ++ Y + D +
Sbjct: 671 EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK 730
Query: 223 IFEKMKVEDEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPREAYLAAI--Y 280
+ KM +E+ Y+ + K + ++A +++ +E K Y A I +
Sbjct: 731 VLSKM-LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789
Query: 281 VKDNKFKKAGEMFQKLEQKVRPRPREAYHCLISLYAKTGNLEKVYKL 327
K + E+ +++ K Y LI K G L+ + L
Sbjct: 790 GMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNL 836
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 90/196 (45%), Gaps = 6/196 (3%)
Query: 131 DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVT-SLNFNNLMTLFMKLGQPLKVHQLV 189
D+ TYG L++ D A+++ K+ + G + +N LM+ K G+ L L
Sbjct: 414 DIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLF 473
Query: 190 DEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIYVK 249
EM RNI A+ Y ++ + D DE ++F + VE K++ ++ + + +
Sbjct: 474 SEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFS-LSVEKGVKVDVVHHNAMIKGFCR 532
Query: 250 AEQFEKAESMLRKLERKVKPRPREAYLAAI--YVKDNKFKKAGEMFQKLEQ-KVRPRPRE 306
+ ++A + + ++ + + Y I YVK A ++F+ +E+ K +P
Sbjct: 533 SGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVV- 591
Query: 307 AYHCLISLYAKTGNLE 322
Y LI+ + G+ +
Sbjct: 592 TYTSLINGFCCQGDFK 607
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 28/239 (11%)
Query: 17 LCTGATEANRPAKKQGLYQRLSEKEKTGLSASETLNQYMTEGRVAGKSELMRIV---KEL 73
+CT +R KK + LS + G++ + T G +EL + + + +
Sbjct: 463 VCTLLAACSRSKKKVNVDTVLSAAQSRGINLN-TAAYNSAIGSYINAAELEKAIALYQSM 521
Query: 74 RKYRRFQDALE--VMEWMEKRNSKFPRTYNH-------------AVHLDLVC---KTKGV 115
RK + D++ ++ R SK+P ++ V+ ++C K V
Sbjct: 522 RKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQV 581
Query: 116 VAAESYFNSLPPPAM--DMYTYGTLLNCYCQELMADKALDLFDKMNELGY-VTSLNFNNL 172
AES FN + D+ Y ++L+ Y KA +LF +M G S+ + L
Sbjct: 582 TEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSAL 641
Query: 173 MTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVED 231
M F K GQP V L+D M+++ IP FT + ++A N L E +R + +++ D
Sbjct: 642 MRAFNKGGQPSNVFVLMDLMREKEIP---FTGAVFFEIFSACNTLQEWKRAIDLIQMMD 697
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 76/163 (46%), Gaps = 4/163 (2%)
Query: 69 IVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVVAAESYFNSLPPP 128
++ L K + +A E+ M +R FP T + +D CK + A+ +S+
Sbjct: 152 LINALVKEGKVSEAEEIYGDMLRR-GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASK 210
Query: 129 AM--DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVT-SLNFNNLMTLFMKLGQPLKV 185
+ D+ T+ TL+N YC+ D +++F +M+ G V ++ + L+ F ++G
Sbjct: 211 SCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAA 270
Query: 186 HQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMK 228
L++ M + + T+ + + S + +L + I E ++
Sbjct: 271 QDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQ 313
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 77/164 (46%), Gaps = 4/164 (2%)
Query: 69 IVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLD-LVCKTKGVVAAESYFNSLPP 127
+VK K A V+E M++ +P + ++ +D L ++ A E + + +
Sbjct: 202 LVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISK 261
Query: 128 PAM--DMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTSL-NFNNLMTLFMKLGQPLK 184
+ D T+ ++N +C+ ++A + D M + G ++ N++ LM F K+G+ +
Sbjct: 262 EGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQE 321
Query: 185 VHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMK 228
Q DE+K+ + + Y MN + + DE ++ +MK
Sbjct: 322 AKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMK 365
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 111/246 (45%), Gaps = 15/246 (6%)
Query: 128 PAMDMYTYGTLLNCYCQELMADKALDLFDKMNELGYVT-SLNFNNLMTLFMKLGQPLKVH 186
P YTY L+N C+ A+ L +KM + GY + ++ +N L+ LG +
Sbjct: 139 PDASAYTY--LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSL 196
Query: 187 QLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVI 246
Q V+ + Q+ + +AFTY + + DE ++ +++ V+ + +Y+ L
Sbjct: 197 QFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEP-NLVSYNVLLTG 255
Query: 247 YVKAEQFEKAESMLRKLERKVKPRPREAY--LAAIYVKDNKFKKAGEMFQKLEQKVRPRP 304
+ K + + A ++ R+L K +Y L D ++++A + +++ R
Sbjct: 256 FCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPS 315
Query: 305 REAYHCLISLYAKTGNLEKVYKLWYFLKSVSPGINE------SYLIMICALKRLNDMKGL 358
Y+ LI+ A G E+ ++ LK +S G ++ SY +I L + + +
Sbjct: 316 VVTYNILINSLAFHGRTEQALQV---LKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLV 372
Query: 359 IKCFKE 364
+KC E
Sbjct: 373 VKCLDE 378
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 28/239 (11%)
Query: 17 LCTGATEANRPAKKQGLYQRLSEKEKTGLSASETLNQYMTEGRVAGKSELMRIV---KEL 73
+CT +R KK + LS + G++ + T G +EL + + + +
Sbjct: 331 VCTLLAACSRSKKKVNVDTVLSAAQSRGINLN-TAAYNSAIGSYINAAELEKAIALYQSM 389
Query: 74 RKYRRFQDALE--VMEWMEKRNSKFPRTYNHA-------------VHLDLVC---KTKGV 115
RK + D++ ++ R SK+P ++ V+ ++C K V
Sbjct: 390 RKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQV 449
Query: 116 VAAESYFNSLPPPAM--DMYTYGTLLNCYCQELMADKALDLFDKMNELGY-VTSLNFNNL 172
AES FN + D+ Y ++L+ Y KA +LF +M G S+ + L
Sbjct: 450 TEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSAL 509
Query: 173 MTLFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVED 231
M F K GQP V L+D M+++ IP FT + ++A N L E +R + +++ D
Sbjct: 510 MRAFNKGGQPSNVFVLMDLMREKEIP---FTGAVFFEIFSACNTLQEWKRAIDLIQMMD 565
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 83/435 (19%), Positives = 191/435 (43%), Gaps = 34/435 (7%)
Query: 57 EGRVAGKSELMRIVKELRKYRRFQDALEVMEWMEKRNSKFPRTYNHAVHLDLVCKTKGVV 116
+G V E ++ L K R+F A +++ M K + + + + C V
Sbjct: 155 QGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVG 214
Query: 117 AAESYFNSLPPPAMDMYT--YGTLLNCYCQ-ELMADKALDLFDKMNELGYVTSLNFNNLM 173
A + F++ ++M + +LL+ C+ + ++D +F ++ + + +FN ++
Sbjct: 215 KAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPF-DAKSFNIVL 273
Query: 174 TLFMK-LGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVE-- 230
+ +G P + ++ EM + +Y + ++ Y+ L++V ++F++MK E
Sbjct: 274 NGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECI 333
Query: 231 DEDKIEWQTYSNLAVIYVKAEQFEKAESMLRKLERKVKPRPREAYLAAIY---VKDNKFK 287
+ D+ + Y+ + KA +A ++++ +E + P ++ K K +
Sbjct: 334 EPDR---KVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTE 390
Query: 288 KAGEMFQK-LEQKVRPRPREAYHCLISLYAKTGNLEKVYKLWYFLKSVS--PGINESYLI 344
+A ++F + LE+ + P R YH + + +TG E+V++L ++ + P + E+Y++
Sbjct: 391 EAKQVFDEMLEKGLFPTIR-TYHAFMRIL-RTG--EEVFELLAKMRKMGCEPTV-ETYIM 445
Query: 345 MICALKRLNDMKGLIKCFKEWESRCERYDLRLVSTVISAYLSEDMGEEAALVFKEAMKKS 404
+I L R D ++ + E + + DL +I EEA +KE K
Sbjct: 446 LIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKG 505
Query: 405 KGPFFKIRERFMVFFLEKRQLDGAVSHLEAALSEVVGDEWRPFPHVVRAFVKYYKEETDL 464
P + + +F K+ + ++ + +++ A VK + E +
Sbjct: 506 MRPNENVEDMIQSWFSGKQYAEQRITDSKGEVNK-------------GAIVKKSEREKNF 552
Query: 465 DGVDELSKILKTHNF 479
E+ K+++ H +
Sbjct: 553 LQQPEVRKVVREHGY 567
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 9/179 (5%)
Query: 118 AESYFNSLPPPAMD--MYTYGTLLNCYCQELMADKALDLFDKMNELGYVTS-LNFNNLMT 174
A+ YFN + ++ +TY +L + L + AL F+ M G FN ++
Sbjct: 239 AKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMIN 298
Query: 175 LFMKLGQPLKVHQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDK 234
F + + + +L EMK I S +Y + Y A++ +D+ RIFE+M+ +
Sbjct: 299 GFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEP 358
Query: 235 IEWQTYSNLAVIYVKAEQFEKAESMLRKLERK-VKPRPREAYLAAIYVKDNKFKKAGEM 292
TYS L A + +A+++L+ + K + P+ +L + + KAG+M
Sbjct: 359 -NATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQ----SKAGDM 412
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/214 (19%), Positives = 96/214 (44%), Gaps = 7/214 (3%)
Query: 129 AMDMYTYGTLLNCYCQELMADKALDLFDKMNELGY-VTSLNFNNLMTLFMKLGQPLKVHQ 187
+D+ Y LL+ C+ D +F +M LG + +F + + G ++
Sbjct: 240 VVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYK 299
Query: 188 LVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAVIY 247
++D MK+ ++ + +T++ + + +D+ + ++M + + W TY+++ +
Sbjct: 300 VLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTW-TYNSIMAYH 358
Query: 248 VKAEQFEKAESMLRKLERKVKPRPREAY--LAAIYVKDNKFKKAGEMFQKL-EQKVRPRP 304
+ +A +L +++R R Y + + ++ +F +A E+++ + E+K P
Sbjct: 359 CDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTV 418
Query: 305 REAYHCLISLYAKTGNLEKVYKLWYFLKSVSPGI 338
+ L K G LE+ + YF + GI
Sbjct: 419 ATYTVMIHGLVRKKGKLEEACR--YFEMMIDEGI 450
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 86/169 (50%), Gaps = 8/169 (4%)
Query: 134 TYGTLLNCYCQELMADKALDLFDKMNELGY-VTSLNFNNLMTLFMKLGQPLKVHQLVDEM 192
TY +N YC+ +KA LFD+M + G+ + ++N+M ++ K + +L+ +M
Sbjct: 390 TYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKM 449
Query: 193 KQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVED--EDKIEWQTYSNLAVIYVKA 250
KQR + + Y++ ++ + DL E+I+++MK DK+ +Y+++ Y ++
Sbjct: 450 KQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKV---SYTSMISAYNRS 506
Query: 251 EQFEKAESMLR--KLERKVKPRPREAYLAAIYVKDNKFKKAGEMFQKLE 297
++ E+ + + ++ R R + ++ K ++ + + Q ++
Sbjct: 507 KELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMK 555
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 71/146 (48%), Gaps = 13/146 (8%)
Query: 127 PPAMDMYTYGTLLNCYCQELMADKALDLFDKMNELGYVTSLN-FNNLMTLFMKLGQPLKV 185
PPA TY L+ Q ++ + + + G+V + +N L+ ++ K G +
Sbjct: 83 PPAS---TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDA 139
Query: 186 HQLVDEMKQRNIPMSAFTYHAWMNSYAALNDLDEVERIFEKMKVEDEDKIEWQTYSNLAV 245
++ DEM R++ +++ +N YA + L+E ++F++M ++D W + +
Sbjct: 140 RKVFDEMPNRDL----CSWNVMVNGYAEVGLLEEARKLFDEMT--EKDSYSW---TAMVT 190
Query: 246 IYVKAEQFEKAESMLRKLERKVKPRP 271
YVK +Q E+A + ++R RP
Sbjct: 191 GYVKKDQPEEALVLYSLMQRVPNSRP 216