Miyakogusa Predicted Gene
- Lj5g3v1598300.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1598300.1 Non Chatacterized Hit- tr|I1L7N5|I1L7N5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26438
PE,66.74,0,PREDICTED: SIMILAR TO LEUCINE-RICH PPR-MOTIF
CONTAINING,NULL; FAMILY NOT NAMED,NULL; PPR: pentatrico,CUFF.55545.1
(485 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 410 e-114
AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 367 e-102
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 5e-76
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 1e-56
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 1e-53
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 2e-49
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 4e-43
AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 1e-41
AT1G28020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 2e-32
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 105 5e-23
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 105 5e-23
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 105 5e-23
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT3G15590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT3G11380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 7e-14
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT1G43010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 61 1e-09
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 61 2e-09
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 60 2e-09
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 60 4e-09
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 60 4e-09
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 59 7e-09
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 59 8e-09
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 59 1e-08
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G28000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 5e-08
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 56 6e-08
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 55 1e-07
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-07
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-07
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 55 1e-07
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 54 4e-07
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 6e-07
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 52 8e-07
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 52 1e-06
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 52 1e-06
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 52 1e-06
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 50 3e-06
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 4e-06
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 4e-06
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 6e-06
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 49 7e-06
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 7e-06
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 49 1e-05
>AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:474516-476383 FORWARD
LENGTH=537
Length = 537
Score = 410 bits (1054), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/441 (47%), Positives = 292/441 (66%), Gaps = 13/441 (2%)
Query: 41 LYRQLSALEKTGGSVSQILNQYVMQGKAIRKSVLENCIRELRKYRKFQHALEIMEWMEMR 100
LY++LS L TGG+V++ LNQ++M+G +RK L C + LRK+R+ QHA EI +WME R
Sbjct: 73 LYKKLSMLSVTGGTVAETLNQFIMEGITVRKDDLFRCAKTLRKFRRPQHAFEIFDWMEKR 132
Query: 101 KVNFSWDNYAVYLDLVCKTKGVVAAESFFEGLLPCAKN-KYTYGALLNCYCKELMADKAL 159
K+ FS ++A+ LDL+ KTKG+ AAE++F L P AKN + TYGAL+NCYC EL +KA
Sbjct: 133 KMTFSVSDHAICLDLIGKTKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEEKAK 192
Query: 160 ALFDKMDEFRFVT-SLAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSC 218
A F+ MDE FV SL FNN+MSMYMRL +PEKVP LV M+QR I TY +WM SC
Sbjct: 193 AHFEIMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQSC 252
Query: 219 AASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKPHE 278
+ NDL+ E+I EM + W T+SNLAAIY KA +EKA+ L+ MEE++ P+
Sbjct: 253 GSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIYTKAGLYEKADSALKSMEEKMNPNN 312
Query: 279 REAYHCLLSLYAGTRNRGEVYRVWDHLKSFSPVINT-SYLVMLSTLRRLNDIEGITKCLE 337
R+++H L+SLYAG EVYRVW+ LK P +N SYLVML + +L D++GI K
Sbjct: 313 RDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKIFT 372
Query: 338 EWESQCVTYDIRMVSVAVNAYLRHDMDEEAESVLKRATMRCKGPFFKIREMFMMFYLKKD 397
EWES+C YD+R+ ++A+N YL+ +M EEAE +L A + KGPF K R++ M+ L+ D
Sbjct: 373 EWESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMKKSKGPFSKARQLLMIHLLEND 432
Query: 398 QLDGALSHLQAAHSEAT----IWRPSPEVVGAFLKYYDEKTDLDGVDELCKI------LD 447
+ D A+ HL+AA S++ W S E+V F ++++ D+DG ++ CKI LD
Sbjct: 433 KADLAMKHLEAAVSDSAENKDEWGWSSELVSLFFLHFEKAKDVDGAEDFCKILSNWKPLD 492
Query: 448 TNDDDSCLKTCDAASESSPEI 468
+ +KT AA ++SP++
Sbjct: 493 SETMTFLIKTYAAAEKTSPDM 513
>AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:871268-872885 REVERSE
LENGTH=502
Length = 502
Score = 367 bits (943), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/445 (43%), Positives = 282/445 (63%), Gaps = 10/445 (2%)
Query: 40 NLYRQLSAL-EKTGGSVSQILNQYVMQGKAIRKSVLENCIRELRKYRKFQHALEIMEWME 98
++Y++LS+L + GG + + LNQ+VM+G ++K L ++LRK+R+ Q ALEI EWME
Sbjct: 40 SIYKKLSSLGTRGGGKMEETLNQFVMEGVPVKKHDLIRYAKDLRKFRQPQRALEIFEWME 99
Query: 99 MRKVNFSWDNYAVYLDLVCKTKGVVAAESFFEGLLPCAKNKYTYGALLNCYCKELMADKA 158
+++ F+ ++A+ L+L+ K+KG+ AAE++F L KN+ TYG+LLNCYC E KA
Sbjct: 100 RKEIAFTGSDHAIRLNLIAKSKGLEAAETYFNSLDDSIKNQSTYGSLLNCYCVEKEEVKA 159
Query: 159 LALFDKMDEFRFVT-SLAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNS 217
A F+ M + V+ SL FNNLM+MYM LG+PEKVP LV M+++ I TY +W+ S
Sbjct: 160 KAHFENMVDLNHVSNSLPFNNLMAMYMGLGQPEKVPALVVAMKEKSITPCDITYSMWIQS 219
Query: 218 CAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKPH 277
C + DL+ E++ EM+ + W T++NLAAIY+K + KAE L+ +E + P
Sbjct: 220 CGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLAAIYIKVGLYGKAEEALKSLENNMNPD 279
Query: 278 EREAYHCLLSLYAGTRNRGEVYRVWDHLKSFSP-VINTSYLVMLSTLRRLNDIEGITKCL 336
R+ YH L++LY G N EVYRVWD LK P V N+SYL ML L +L+DI+G+ K
Sbjct: 280 VRDCYHFLINLYTGIANASEVYRVWDLLKKRYPNVNNSSYLTMLRALSKLDDIDGVKKVF 339
Query: 337 EEWESQCVTYDIRMVSVAVNAYLRHDMDEEAESVLKRATMRCKGPFFKIREMFMMFYLKK 396
EWES C TYD+RM +VA+++YL+ +M EEAE+V A +CKG F K R++ MM LK
Sbjct: 340 AEWESTCWTYDMRMANVAISSYLKQNMYEEAEAVFNGAMKKCKGQFSKARQLLMMHLLKN 399
Query: 397 DQLDGALSHLQAA-HSEATIWRPSPEVVGAFLKYYDEKTDLDGVDELCKILDTNDDDSC- 454
DQ D AL H +AA + W S E++ +F +++E D+DG +E CK L S
Sbjct: 400 DQADLALKHFEAAVLDQDKNWTWSSELISSFFLHFEEAKDVDGAEEFCKTLTKWSPLSSE 459
Query: 455 -----LKTCDAASESSPEIDPILKE 474
+KT AA ++ P++ L+E
Sbjct: 460 TYTLLMKTYLAAGKACPDMKKRLEE 484
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 281 bits (720), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 165/456 (36%), Positives = 262/456 (57%), Gaps = 19/456 (4%)
Query: 48 LEKTGGS---VSQILNQYVMQGKAIRKSVLENCIRELRKYRKFQHALEIMEWMEMRKVNF 104
L K GG+ V Q LNQ++ K + K + + I++LR + AL++ E ME R +N
Sbjct: 29 LFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALKLSEVMEERGMNK 88
Query: 105 SWDNYAVYLDLVCKTKGVVAAESFFEGLLPCAKNKYTYGALLNCYCKELMADKALALFDK 164
+ + A++LDLV K + + A E++F L +K + TYG+LLNCYCKEL+ +KA L +K
Sbjct: 89 TVSDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKAEGLLNK 148
Query: 165 MDEFRFV-TSLAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASND 223
M E +S+++N+LM++Y + G EKVP ++ +++ + ++TY+VWM + AA+ND
Sbjct: 149 MKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRALAATND 208
Query: 224 LNEAERIYGEMRRVDGNMI-DWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAY 282
++ ER+ EM R DG + DW TYSN+A+IYV A +KAE L+ +E + + AY
Sbjct: 209 ISGVERVIEEMNR-DGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRDFTAY 267
Query: 283 HCLLSLYAGTRNRGEVYRVWDHLKSFSP-VINTSYLVMLSTLRRLNDIEGITKCLEEWES 341
L++LY EVYR+W L+ P N +YL M+ L +LND+ G +EW++
Sbjct: 268 QFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQA 327
Query: 342 QCVTYDIRMVSVAVNAYLRHDMDEEAESVLKRATMRCKGPFFKIREMFMMFYLKKDQLDG 401
C TYDIR+V+V + AY + + ++A + ++A R K E+FM +Y+K +
Sbjct: 328 NCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMAR 387
Query: 402 ALSHLQAAHS----EATIWRPSPEVVGAFLKYYDEKTDLDGVDELCKILDTNDDD----- 452
AL + A S + W PSPE V A + Y+++K D++G + L +IL D+
Sbjct: 388 ALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGAENLLEILKNGTDNIGAEI 447
Query: 453 --SCLKTCDAASESSPEIDPILK-EDSYVNHAQGNL 485
++T AA +S P + LK E+ VN A L
Sbjct: 448 FEPLIRTYAAAGKSHPAMRRRLKMENVEVNEATKKL 483
>AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:408779-410433 FORWARD
LENGTH=524
Length = 524
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 142/425 (33%), Positives = 235/425 (55%), Gaps = 7/425 (1%)
Query: 34 RPAEKPN-LYRQLSALEKTGGSVSQILNQYVMQGKAIRKSVLENCIRELRKYRKFQHALE 92
RP + N +Y+++S +EK + +LNQ+ G+ + K L ++ELRKY++ ALE
Sbjct: 61 RPIVQWNAIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALE 120
Query: 93 IMEWMEMRKVNF--SWDNYAVYLDLVCKTKGVVAAESFFEGLLPCAKNKYTYGALLNCYC 150
+ +WM R F S + A+ LDL+ K +G+ AE FF L K++ YG+LLN Y
Sbjct: 121 VYDWMNNRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYV 180
Query: 151 KELMADKALALFDKM-DEFRFVTSLAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAF 209
+ +KA AL + M D+ + L FN +M++YM L +KV +V +M+Q+ I + +
Sbjct: 181 RAKSREKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIY 240
Query: 210 TYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRM 269
+Y++W++SC + + + E +Y +M+ +W T+S +A +Y+K + EKAE LR
Sbjct: 241 SYNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRK 300
Query: 270 MEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHLKSFSPVI-NTSYLVMLSTLRRLND 328
+E I R YH LLSLY N+ E+YRVW KS P I N Y ++S+L R+ D
Sbjct: 301 VEARITGRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGD 360
Query: 329 IEGITKCLEEWESQCVTYDIRMVSVAVNAYLRHDMDEEAESVLKRATMRCKGPFFKIREM 388
IEG K EEW +YD R+ ++ +NAY+++D E AE + P E+
Sbjct: 361 IEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEI 420
Query: 389 FMMFYLKKDQLDGALSHLQAAHSE--ATIWRPSPEVVGAFLKYYDEKTDLDGVDELCKIL 446
+ + +K + AL+ L+ A S ++ WRP ++ F K +E++D+ + + ++L
Sbjct: 421 LAVGHTRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELL 480
Query: 447 DTNDD 451
+ D
Sbjct: 481 RQSGD 485
>AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11533257-11534817 REVERSE
LENGTH=492
Length = 492
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 139/425 (32%), Positives = 224/425 (52%), Gaps = 14/425 (3%)
Query: 32 YERPAEKPNLYRQLSALEKTGGSVSQILNQYVMQGKAIRKSVLENCIRELRKYRKFQHAL 91
Y +K LY ++S L SV L +V GK + + L + +LR+ ++F HAL
Sbjct: 18 YTNRVKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHAL 77
Query: 92 EIMEWMEMRKV-NFSWDNYAVYLDLVCKTKGVVAAESFFEGLLPCAKNKYTYGALLNCYC 150
E+ +WM V FS +AV+LDL+ + G V AE +FE L KN TYGALLNCY
Sbjct: 78 EVSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCYV 137
Query: 151 KELMADKALALFDKMDEFRFVTS-LAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAF 209
++ +K+L F+KM E FVTS L +NN+M +Y +G+ EKVP+++ +M++ + +
Sbjct: 138 RQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNY 197
Query: 210 TYHVWMNSCAASNDLNEAERIYGEM----RRVDGNMIDWRTYSNLAAIYVKAEQFEKAEV 265
+Y + +N+ A DL ERI G + RR D M DW TY+ A Y+ ++A
Sbjct: 198 SYRICINAFGAMYDL---ERIGGTLRDMERRQDITM-DWNTYAVAAKFYIDGGDCDRAVE 253
Query: 266 MLRMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHLKSFSP-VINTSYLVMLSTLR 324
+L+M E ++ + E Y+ L++LYA + EV R+WD K IN YL +L +L
Sbjct: 254 LLKMSENRLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLV 313
Query: 325 RLNDIEGITKCLEEWESQCVTYDIRMVSVAVNAYLRHDMDEEAESVLKRATMRCKGPFFK 384
+++ + + L EW+S YD R+ + + Y+ M+E+AE++L+ R K +
Sbjct: 314 KIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPE 373
Query: 385 IREMFMMFYLKKDQLDGALSHLQAA---HSEATIWRPSPEVVGAFLKYYDEKTDLDGVDE 441
E+ Y +K L+ A ++ A + WRP +V + L + ++ L V+
Sbjct: 374 SWELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEVES 433
Query: 442 LCKIL 446
L
Sbjct: 434 FVASL 438
>AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:1258581-1260265 FORWARD
LENGTH=532
Length = 532
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/448 (30%), Positives = 237/448 (52%), Gaps = 11/448 (2%)
Query: 38 KPNLYRQLSALEKTGGSVSQILNQYVMQGKAIRKSVLENCIRELRKYRKFQHALEIMEWM 97
+ L +L +L T S + ++ +G ++RK L +RELRK ++++HALEI EWM
Sbjct: 60 RDTLGGRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWM 119
Query: 98 EMRK-VNFSWDNYAVYLDLVCKTKGVVAAESFFEGLLPCAKNKYTYGALLNCYCKELMAD 156
+++ + +YAV+LDL+ K +G+ +AE FFE + + +LL+ Y + ++D
Sbjct: 120 VVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSD 179
Query: 157 KALALFDKMDEFRFVTS-LAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWM 215
KA ALF+KM E F+ S L +N+++SMY+ G+ EKVP L+ +++ R P TY++W+
Sbjct: 180 KAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIRTSP-DIVTYNLWL 238
Query: 216 NSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIK 275
+ A+ ND+ AE++Y + + N DW TYS L +Y K + EKA + L+ ME+ +
Sbjct: 239 TAFASGNDVEGAEKVYLKAKEEKLNP-DWVTYSVLTNLYAKTDNVEKARLALKEMEKLVS 297
Query: 276 PHEREAYHCLLSLYAGTRNRGEVYRVWDHLK-SFSPVINTSYLVMLSTLRRLNDIEGITK 334
R AY L+SL+A ++ V W +K SF + + YL M+S + +L + E
Sbjct: 298 KKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKG 357
Query: 335 CLEEWESQCVTYDIRMVSVAVNAYLRHDMDEEAESVLKRATMRCKGPFFKIREMFMMFYL 394
+EWES T D R+ ++ + Y+ D E +R + P + E+ YL
Sbjct: 358 LYDEWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYL 417
Query: 395 KKDQLDGALSHLQAAHSEATIWRPSPEVVGAFLKYYDEKTDLDGVDELCKIL------DT 448
K+ ++ L A W + +V K +E+ ++ G ++L +L +T
Sbjct: 418 KRKDMEKVLDCFGKAIDSVKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNT 477
Query: 449 NDDDSCLKTCDAASESSPEIDPILKEDS 476
+S L+T A E + ++ + +D+
Sbjct: 478 QLYNSLLRTYAKAGEMALIVEERMAKDN 505
>AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8926110-8927722 FORWARD
LENGTH=490
Length = 490
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 128/441 (29%), Positives = 228/441 (51%), Gaps = 7/441 (1%)
Query: 40 NLYRQLSALEKTGGSVSQILNQYVMQGKAIRKSVLENCIRELRKYRKFQHALEIMEWMEM 99
L R+++ S+ ++L+ ++ QG ++ S L + I+ LRK+ +F HAL+I +WM
Sbjct: 39 TLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMSE 98
Query: 100 RKVN-FSWDNYAVYLDLVCKTKGVVAAESFFEGLLPCAKNKYTYGALLNCYCKELMADKA 158
+V+ S + A+ LDL+ K G+ AE FFE + +N + YGALLNCY + + KA
Sbjct: 99 HRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKA 158
Query: 159 LALFDKMDEFRFVTS-LAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNS 217
+F +M E F+ L +N ++++Y+R G+ V +L+ +M + FT + +++
Sbjct: 159 EQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHA 218
Query: 218 CAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKPH 277
+ +D+ E+ G +DWRTY++ A Y+KA EKA MLR E+ +
Sbjct: 219 YSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQ 278
Query: 278 ERE-AYHCLLSLYAGTRNRGEVYRVWDHLKSFSPVINTSYLVMLSTLRRLNDIEGITKCL 336
+R+ AY L+S Y + EVYR+W K NT Y+ ++S L +++DIE + K +
Sbjct: 279 KRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEVEKIM 338
Query: 337 EEWESQCVTYDIRMVSVAVNAYLRHDMDEEAESVLKRATMRCKGPFFKIREMFMMFYLKK 396
EEWE+ +DIR+ + + Y + M E+AE V+ + + E + Y
Sbjct: 339 EEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKMA 398
Query: 397 DQLDGALSHLQ-AAHSEATIWRPSPEVVGAFLKYYDEKTDLDGVDELCKILDTNDD---D 452
+++ A+ + A WRP V+ + + Y + + D++G+ ++ ++L D
Sbjct: 399 GKMEKAVEKWKRAIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLLSERGHISYD 458
Query: 453 SCLKTCDAASESSPEIDPILK 473
L + A S +D + K
Sbjct: 459 QLLYDMNGAGLSWKIVDAMGK 479
>AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9693262-9694815 REVERSE
LENGTH=491
Length = 491
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/396 (31%), Positives = 211/396 (53%), Gaps = 15/396 (3%)
Query: 54 SVSQILNQYVMQGKAIRKSVLENCIRELRKYRKFQHALEIMEWMEMRK-VNFSWDNYAVY 112
SV+ +L + + G A+ S L + L + ++ AL++MEWME +K + FS + A+
Sbjct: 53 SVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWMENQKDIEFSVYDIALR 112
Query: 113 LDLVCKTKGVVAAESFFEGLLPCAKN----KYTYGALLNCYCKELMADKALALFDKMDEF 168
LDL+ KT G+ E +FE LL + + K Y LL Y K M +A AL +K++
Sbjct: 113 LDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNKMVKEAEALMEKLNGL 172
Query: 169 RF-VTSLAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEA 227
F VT FN +M +Y G+ EKV +V M+ +IP + +Y++WMN+C + +
Sbjct: 173 GFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWMNACCEVSGVAAV 232
Query: 228 ERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLLS 287
E +Y EM + W + LA +Y+K+ EKA ++L E+ + R Y L++
Sbjct: 233 ETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKMLNRSNRLGYFFLIT 292
Query: 288 LYAGTRNRGEVYRVWDHLKSFSPVIN-TSYLVMLSTLRRLNDIEGITKCLEEWESQCVTY 346
LYA N+ V R+W+ KS I+ +Y+ +LS+L + D+E + EWE+QC Y
Sbjct: 293 LYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAERVFSEWEAQCFNY 352
Query: 347 DIRMVSVAVNAYLRHDMDEEAESVLKRATMRCKGPFFKIREMFMMFYLKKDQLDGALSHL 406
D+R+ +V + AY+R+ +AES+ R P +K E+ M ++K + ++ A +
Sbjct: 353 DVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGWVKCENMEKA---I 409
Query: 407 QAAHSEATI-----WRPSPEVVGAFLKYYDEKTDLD 437
A H + WRPS +V A +Y++++ ++
Sbjct: 410 DAMHQVFVLMRRCHWRPSHNIVMAIAEYFEKEEKIE 445
>AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8926535-8927722 FORWARD
LENGTH=395
Length = 395
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 191/382 (50%), Gaps = 6/382 (1%)
Query: 98 EMRKVNFSWDNYAVYLDLVCKTKGVVAAESFFEGLLPCAKNKYTYGALLNCYCKELMADK 157
E R S + A+ LDL+ K G+ AE FFE + +N + YGALLNCY + + K
Sbjct: 3 EHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHK 62
Query: 158 ALALFDKMDEFRFVTS-LAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMN 216
A +F +M E F+ L +N ++++Y+R G+ V +L+ +M + FT + ++
Sbjct: 63 AEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLH 122
Query: 217 SCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKP 276
+ + +D+ E+ G +DWRTY++ A Y+KA EKA MLR E+ +
Sbjct: 123 AYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNA 182
Query: 277 HERE-AYHCLLSLYAGTRNRGEVYRVWDHLKSFSPVINTSYLVMLSTLRRLNDIEGITKC 335
+R+ AY L+S Y + EVYR+W K NT Y+ ++S L +++DIE + K
Sbjct: 183 QKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEVEKI 242
Query: 336 LEEWESQCVTYDIRMVSVAVNAYLRHDMDEEAESVLKRATMRCKGPFFKIREMFMMFYLK 395
+EEWE+ +DIR+ + + Y + M E+AE V+ + + E + Y
Sbjct: 243 MEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKM 302
Query: 396 KDQLDGALSHLQ-AAHSEATIWRPSPEVVGAFLKYYDEKTDLDGVDELCKILDTNDD--- 451
+++ A+ + A WRP V+ + + Y + + D++G+ ++ ++L
Sbjct: 303 AGKMEKAVEKWKRAIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLLSERGHISY 362
Query: 452 DSCLKTCDAASESSPEIDPILK 473
D L + A S +D + K
Sbjct: 363 DQLLYDMNGAGLSWKIVDAMGK 384
>AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2941864-2943324 FORWARD
LENGTH=409
Length = 409
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 187/332 (56%), Gaps = 6/332 (1%)
Query: 33 ERPAEKPNLYRQLSALEKTGGSVSQILNQYVMQGKAIRKSVLENCIRELRKYRKFQHALE 92
E EK +L ++ L S + +L +++ +G + + L +ELR+ R+++HALE
Sbjct: 49 EESEEKDDLKSRIFRLRLPKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALE 108
Query: 93 IMEWM-EMRKVNFSWDNYAVYLDLVCKTKGVVAAESFFEGLLPCAKNKYTYGALLNCYCK 151
+ EWM + + S +YA +DL+ K G+ AAE +FEGL +K TY +LL+ Y
Sbjct: 109 VTEWMVQHEESKISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAA 168
Query: 152 ELMADKALALFDKMDEFRFVT--SLAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAF 209
++A ALF ++ E +T ++ +N +M++YM +G+ EKVP+++ ++Q+++ F
Sbjct: 169 SKQTERAEALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIF 228
Query: 210 TYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRM 269
TY++W++SCAA+ +++E +I EMR + W Y +L +IY+ + + AE L +
Sbjct: 229 TYNLWLSSCAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPV 288
Query: 270 -MEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHLKSFSPVINT-SYLVMLSTLRRLN 327
E+ I E Y L+ L+ G N+ + ++W L++ + ++++ SY+ +LS+ L
Sbjct: 289 EAEKSISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLG 348
Query: 328 DIEGITKCLEEW-ESQCVTYDIRMVSVAVNAY 358
+ + + +W ES+ +D +NA+
Sbjct: 349 HLREAEEIIHQWKESKTTEFDASACLRILNAF 380
>AT1G28020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:9768395-9771157 REVERSE
LENGTH=612
Length = 612
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 169/344 (49%), Gaps = 12/344 (3%)
Query: 42 YRQLSALEKTGGSVSQILNQYVMQGKAIRKSVLENCIRELRKYRKFQHALEIMEWMEMRK 101
+R AL + + +L Q+ QG + S + I++LR + AL++ EWM K
Sbjct: 40 HRITDALHRNA-QIIPVLEQWRQQGNQVNPSHVRVIIKKLRDSDQSLQALQVSEWMSKEK 98
Query: 102 V-NFSWDNYAVYLDLVCKTKGVVAAESFFEGLLPCAKNKYTYGALLNCYCKELMADKAL- 159
+ N +++A L L+ G+ AE FFE + A+ Y +LLN Y + +DK L
Sbjct: 99 ICNLIPEDFAARLHLIENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYAR---SDKTLC 155
Query: 160 ---ALFDKMDEFRFVT-SLAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWM 215
A F KM + + + +N +MS+Y L EKV +L+ +M+ + T + +
Sbjct: 156 KAEATFQKMRDLGLLLRPVPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVL 215
Query: 216 NSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIK 275
+A D+ E E+ + + G ++W T ++A Y++A KA MLR+ E+ +
Sbjct: 216 KLYSAVCDVTEMEKFLNKWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLVD 275
Query: 276 PHE-REAYHCLLSLYAGTRNRGEVYRVWDHLKS-FSPVINTSYLVMLSTLRRLNDIEGIT 333
+ AY L+ LY NR EV RVW KS N Y ++ +L +++DI G
Sbjct: 276 QKSLKSAYDHLMKLYGEAGNREEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAE 335
Query: 334 KCLEEWESQCVTYDIRMVSVAVNAYLRHDMDEEAESVLKRATMR 377
+ + WES + +D R+ ++ + Y M E+AE ++ T++
Sbjct: 336 EIYKVWESLPLEFDHRIPTMLASGYRDRGMTEKAEKLMNSKTIK 379
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 55 VSQILNQYVMQGKAIRKSVLENCIRELRKYRKFQHALEIMEWMEMRKV-NFSWDNYAVYL 113
V+ +L Q+ G ++ S L+ I+ LR ++F AL++ EWM ++V N ++YA L
Sbjct: 387 VTPLLEQW---GDQMKPSDLKCLIKNLRDSKQFSKALQVSEWMGEKQVCNLYLEDYAARL 443
Query: 114 DLVCKTKGVVAAESFFEGLLPCAKNKYTYGALLNCYCKELMADKALA 160
L G+ AE +FE + K+ Y ALL+ Y K +DK L
Sbjct: 444 YLTENVLGLEEAEKYFENIPENMKDYSVYVALLSSYAK---SDKNLG 487
>AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 161/329 (48%), Gaps = 16/329 (4%)
Query: 52 GGSVSQILNQYVMQGKAIRKSVLENCIRELRKYRKFQHALEIMEWMEM-RKVNFSWDNYA 110
G S+ L+++V +G I + + + +LR+ R + AL++ EW+E +K+ + +YA
Sbjct: 141 GLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDYA 200
Query: 111 VYLDLVCKTKGVVAAESFFEGLLPCAKNKYTYGALL-NCYCKELMADKALALFDKMDEFR 169
LDL K +G+ E+ + + K + Y LL NC + L +F+KM +
Sbjct: 201 SRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSEL-VFNKMKDLG 259
Query: 170 F-VTSLAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAE 228
F ++ + ++ ++ R+ R +K+ ++ M + I S TY + ++ A+ND++ E
Sbjct: 260 FPLSGFTCDQMLLLHKRIDR-KKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGME 318
Query: 229 RIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLLSL 288
+I M+ +G +D++T + A Y A +KAE +L+ ME E R A+ LLS+
Sbjct: 319 QILETMKD-EGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLSI 377
Query: 289 YAGTRNRGEVYRVWDHLKSFSPVINTSYLVMLSTLRRLNDIEGITKCLEEWESQCVTYDI 348
YA EV R+W +S P S L + +LN ++ E + V D
Sbjct: 378 YASLGREDEVKRIWKICES-KPYFEES-LAAIQAFGKLNKVQEAEAIFE----KIVKMDR 431
Query: 349 RMV----SVAVNAYLRHDMDEEAESVLKR 373
R SV + Y+ H M + + ++KR
Sbjct: 432 RASSSTYSVLLRVYVDHKMLSKGKDLVKR 460
>AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 161/329 (48%), Gaps = 16/329 (4%)
Query: 52 GGSVSQILNQYVMQGKAIRKSVLENCIRELRKYRKFQHALEIMEWMEM-RKVNFSWDNYA 110
G S+ L+++V +G I + + + +LR+ R + AL++ EW+E +K+ + +YA
Sbjct: 141 GLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDYA 200
Query: 111 VYLDLVCKTKGVVAAESFFEGLLPCAKNKYTYGALL-NCYCKELMADKALALFDKMDEFR 169
LDL K +G+ E+ + + K + Y LL NC + L +F+KM +
Sbjct: 201 SRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSEL-VFNKMKDLG 259
Query: 170 F-VTSLAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAE 228
F ++ + ++ ++ R+ R +K+ ++ M + I S TY + ++ A+ND++ E
Sbjct: 260 FPLSGFTCDQMLLLHKRIDR-KKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGME 318
Query: 229 RIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLLSL 288
+I M+ +G +D++T + A Y A +KAE +L+ ME E R A+ LLS+
Sbjct: 319 QILETMKD-EGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLSI 377
Query: 289 YAGTRNRGEVYRVWDHLKSFSPVINTSYLVMLSTLRRLNDIEGITKCLEEWESQCVTYDI 348
YA EV R+W +S P S L + +LN ++ E + V D
Sbjct: 378 YASLGREDEVKRIWKICES-KPYFEES-LAAIQAFGKLNKVQEAEAIFE----KIVKMDR 431
Query: 349 RMV----SVAVNAYLRHDMDEEAESVLKR 373
R SV + Y+ H M + + ++KR
Sbjct: 432 RASSSTYSVLLRVYVDHKMLSKGKDLVKR 460
>AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 161/329 (48%), Gaps = 16/329 (4%)
Query: 52 GGSVSQILNQYVMQGKAIRKSVLENCIRELRKYRKFQHALEIMEWMEM-RKVNFSWDNYA 110
G S+ L+++V +G I + + + +LR+ R + AL++ EW+E +K+ + +YA
Sbjct: 141 GLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDYA 200
Query: 111 VYLDLVCKTKGVVAAESFFEGLLPCAKNKYTYGALL-NCYCKELMADKALALFDKMDEFR 169
LDL K +G+ E+ + + K + Y LL NC + L +F+KM +
Sbjct: 201 SRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSEL-VFNKMKDLG 259
Query: 170 F-VTSLAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAE 228
F ++ + ++ ++ R+ R +K+ ++ M + I S TY + ++ A+ND++ E
Sbjct: 260 FPLSGFTCDQMLLLHKRIDR-KKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGME 318
Query: 229 RIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLLSL 288
+I M+ +G +D++T + A Y A +KAE +L+ ME E R A+ LLS+
Sbjct: 319 QILETMKD-EGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLSI 377
Query: 289 YAGTRNRGEVYRVWDHLKSFSPVINTSYLVMLSTLRRLNDIEGITKCLEEWESQCVTYDI 348
YA EV R+W +S P S L + +LN ++ E + V D
Sbjct: 378 YASLGREDEVKRIWKICES-KPYFEES-LAAIQAFGKLNKVQEAEAIFE----KIVKMDR 431
Query: 349 RMV----SVAVNAYLRHDMDEEAESVLKR 373
R SV + Y+ H M + + ++KR
Sbjct: 432 RASSSTYSVLLRVYVDHKMLSKGKDLVKR 460
>AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5318307-5320422 FORWARD
LENGTH=594
Length = 594
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 176/348 (50%), Gaps = 17/348 (4%)
Query: 33 ERPAEKPNLYRQLSALEKTGGSVSQILNQYVMQGKAIRKSVLENCIRELRKYRKFQHALE 92
+RP+E +++ + ++ +G SV L+++V QGK + E+ + +LRK R F AL+
Sbjct: 125 KRPSE---MFKAIVSV--SGLSVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQ 179
Query: 93 IMEWM-EMRKVNFSWDNYAVYLDLVCKTKGVVAAESFFEGLLPCAKNKYTYGALLNCYCK 151
+ EW+ E ++ +YA LDL+ K +G E++ + + + + Y LL +
Sbjct: 180 MTEWLDENKQFEMEERDYACRLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVA 239
Query: 152 ELMADKALALFDKMDEFRF-VTSLAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFT 210
A A+F+KM + F +++ N ++ +Y R+ + +K+ ++ + + + + T
Sbjct: 240 TSNVRTAEAVFNKMKDLGFPLSTFTCNQMLILYKRVDK-KKIADVLLLLEKENLKPNLNT 298
Query: 211 YHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMM 270
Y + +++ +SND+ E+I M+ +G +D R + +A Y A EKAE +L+ M
Sbjct: 299 YKILIDTKGSSNDITGMEQIVETMKS-EGVELDLRARALIARHYASAGLKEKAEKVLKEM 357
Query: 271 EEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHLKSFSPVINTSYLVMLS--TLRRLND 328
E E R LLS+Y + EV RVW + +P N +L+ + ++ D
Sbjct: 358 EGESLEENRHMCKDLLSVYGYLQREDEVRRVWKICEE-NPRYNEVLAAILAFGKIDKVKD 416
Query: 329 IEGI-TKCLEEWESQCVTYDIRMVSVAVNAYLRHDMDEEAESVLKRAT 375
E + K L+ S V+ ++ SV + Y+ H M E + ++K+ +
Sbjct: 417 AEAVFEKVLK--MSHRVSSNV--YSVLLRVYVDHKMVSEGKDLVKQMS 460
>AT3G15590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5275568-5277658 REVERSE
LENGTH=610
Length = 610
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 130/253 (51%), Gaps = 10/253 (3%)
Query: 54 SVSQILNQYVMQGKAIRKSVLENCIRELRKYRKFQHALEIMEWMEMR-KVNFSWDNYAVY 112
SV +L ++V +GK + ++ + I LRK + + L++ EW+ + F+ NYA
Sbjct: 156 SVKHVLEKWVKEGKDLSQAEVTLAIHNLRKRKSYAMCLQLWEWLGANTQFEFTEANYASQ 215
Query: 113 LDLVCKTKGVVAAESFFEGLLPCAKNKYTYGALL-NCYCKELMADKALALFDKMDEFRFV 171
LDLV K + AE F + + ++ + Y LL NC K +KA +F+KM E +F
Sbjct: 216 LDLVAKVHSLQKAEIFLKDIPESSRGEVVYRTLLANCVLKH-HVNKAEDIFNKMKELKFP 274
Query: 172 TSL-AFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERI 230
TS+ A N L+ +Y R +K+ ++ M + I S TYH +NS + D+ E+I
Sbjct: 275 TSVFACNQLLLLYSMHDR-KKISDVLLLMERENIKPSRATYHFLINSKGLAGDITGMEKI 333
Query: 231 YGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAYHC--LLSL 288
E + +G +D S LA Y++A E+A+ +++ E E K ++ + C LL L
Sbjct: 334 V-ETIKEEGIELDPELQSILAKYYIRAGLKERAQDLMK--EIEGKGLQQTPWVCRSLLPL 390
Query: 289 YAGTRNRGEVYRV 301
YA + V R+
Sbjct: 391 YADIGDSDNVRRL 403
>AT3G11380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3564079-3565779 FORWARD
LENGTH=541
Length = 541
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 139/311 (44%), Gaps = 42/311 (13%)
Query: 72 SVLENCIRELRKYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLVCKTKGVVAAESFFEG 131
S+L + +LR + + ALE+ +WM +K+ ++++ L K + AE FFE
Sbjct: 76 SLLRGIVEKLRSSNRPRQALEVSDWMVEQKMYNLPEDFSARFHLTEKVLNLEEAEKFFES 135
Query: 132 LLPCAKNKYTYGALLNCYCK---ELMADKALALFDKMDEFRFVTSLA-FNNLMSMYMRLG 187
+ + + Y +LL Y + E KA ++F KM + + + +N++ S+Y LG
Sbjct: 136 IPENMRFESMYNSLLRSYARQSGEKALKKAESVFKKMKKLGLLLRPSPYNSMTSLYSSLG 195
Query: 188 RPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYG---EMRRVDGNMIDW 244
+KV +++ +M++ + + T + + AA +D+ ++ E+ R+DG
Sbjct: 196 NRDKVDEILREMKENNVELDNVTVNNALRVYAAVSDVATMDKFLADRKEITRLDG----- 250
Query: 245 RTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDH 304
ML M + AY L+SLY +V+RVWD
Sbjct: 251 -------------------LTMLAMAK---------AYE-LMSLYGEAGEIEDVHRVWDK 281
Query: 305 LKSFSPVINTSYLVMLSTLRRLNDIEGITKC-LEEWESQCVTYDIRMVSVAVNAYLRHDM 363
K+ N + ++ +L +L D +G K EWE + +D R+ + V+ Y M
Sbjct: 282 YKATRQKDNEEFRTLIGSLLKLGDTKGAEKIYYNEWECSGLEFDNRIPDMLVSGYREKGM 341
Query: 364 DEEAESVLKRA 374
+A+ ++ +
Sbjct: 342 VMKADKLVNKT 352
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 80/154 (51%), Gaps = 4/154 (2%)
Query: 55 VSQILNQYVMQGKAIRKSVLENCIRELRKYRKFQHALEIMEWMEMRKV-NFSWDNYAVYL 113
++ +L + +G + L + I+ LR + ALE WM +KV N ++YA L
Sbjct: 362 ITLLLEEMDKKGNKVSPPGLRDLIKNLRDSNQLSKALEASTWMCQKKVFNLFSEDYATRL 421
Query: 114 DLVCKTKGVVAAESFFEGLLPCAKNKYT-YGALLNCYCKEL-MADKALALFDKMDEFRFV 171
L K G+ AE+FFE +P Y+ Y LL+CY + KA A+F+KM E
Sbjct: 422 HLTEKVLGLEEAENFFESSIPENMKDYSVYDTLLSCYARSSNTQSKAEAVFEKMRELGLQ 481
Query: 172 TSLA-FNNLMSMYMRLGRPEKVPQLVHDMRQRRI 204
+ L+ FN+L+S+Y G+ V L+ DM+ + I
Sbjct: 482 SKLSPFNSLISLYSGQGKLSVVNILLCDMKHKNI 515
>AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2336649-2338481 REVERSE
LENGTH=534
Length = 534
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 164/400 (41%), Gaps = 12/400 (3%)
Query: 52 GGSVSQILNQYVMQGKAIRKSVLENCIRELRKYRKFQHALEIMEWM-EMRKVNFSWDNYA 110
G +V L ++ G + + + I LRK + + ALE+MEW+ R Y+
Sbjct: 78 GVTVGSALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALELMEWIIRERPYRLGELEYS 137
Query: 111 VYLDLVCKTKGVVAAESFFEGLLPCAKNKYTYGALLNCYCKELMADKALALFDKMDEFRF 170
L+ K GV E F + +N+ Y L+ + + AL KM E +
Sbjct: 138 YLLEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKMRELGY 197
Query: 171 VTS-LAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAER 229
TS L +N L+ GR + + + + M+ + TYH+ M A ++++ +
Sbjct: 198 RTSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGVLK 257
Query: 230 IYGEMRR--VDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLLS 287
+ M++ V+ N + +Y LA + A + AE +E+ I L+
Sbjct: 258 AFDGMKKAGVEPNEV---SYCILAMAHAVARLYTVAEAYTEEIEKSITGDNWSTLDILMI 314
Query: 288 LYAGTRNRGEVYRVWDHLKSFSPVINTSYLVMLSTLRRLNDIEGITKCLEEWESQCVTYD 347
LY E+ R W+ ++ F V + SYL+ R+ +++ + E ++ +
Sbjct: 315 LYGRLGKEKELARTWNVIRGFHHVRSKSYLLATEAFARVGNLDRAEELWLEMKNVKGLKE 374
Query: 348 IRMVSVAVNAYLRHDMDEEAESVLKRATMRCKGPFFKIREMFMMFYLKKDQLDGALSHLQ 407
+ ++ Y + + E+A V + T P + K + AL +++
Sbjct: 375 TEQFNSLLSVYCKDGLIEKAIGVFREMTGNGFKPNSITYRHLALGCAKAKLMKEALKNIE 434
Query: 408 AA---HSEATIWRPSP--EVVGAFLKYYDEKTDLDGVDEL 442
+ +I +P E + ++ + EK D++ ++L
Sbjct: 435 MGLNLKTSKSIGSSTPWLETTLSIIECFAEKGDVENSEKL 474
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 128/271 (47%), Gaps = 13/271 (4%)
Query: 78 IRELRKYRKFQHALEIMEW-MEMRKVNFSWDN--YAVYLDLVCKTKGVVAAESFFEGLL- 133
++ L ++KF AL +W M+ + DN A+ + ++ K V +A + F GL
Sbjct: 142 LKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQE 201
Query: 134 -PCAKNKYTYGALLNCYCKELMADKALALFDKMDEFRFVTSL-AFNNLMSMYMRLGRP-E 190
+ + Y+Y +L++ + +A+ +F KM+E +L +N +++++ ++G P
Sbjct: 202 DGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWN 261
Query: 191 KVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNL 250
K+ LV M+ I A+TY+ + C + EA +++ EM+ G D TY+ L
Sbjct: 262 KITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAA-GFSYDKVTYNAL 320
Query: 251 AAIYVKAEQFEKA-EVMLRMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHL--KS 307
+Y K+ + ++A +V+ M+ P Y+ L+S YA E + + + K
Sbjct: 321 LDVYGKSHRPKEAMKVLNEMVLNGFSP-SIVTYNSLISAYARDGMLDEAMELKNQMAEKG 379
Query: 308 FSPVINTSYLVMLSTLRRLNDIEGITKCLEE 338
P + T Y +LS R +E EE
Sbjct: 380 TKPDVFT-YTTLLSGFERAGKVESAMSIFEE 409
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 126/294 (42%), Gaps = 18/294 (6%)
Query: 98 EMRKVNFSWDNYAVYLDLVCKTKGVVAAES--FFEGLLPC--AKNKYTYGALLNCYCKEL 153
+M+ + D Y + C +G + E+ FE + + +K TY ALL+ Y K
Sbjct: 269 KMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSH 328
Query: 154 MADKALALFDKMDEFRFVTSL-AFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYH 212
+A+ + ++M F S+ +N+L+S Y R G ++ +L + M ++ FTY
Sbjct: 329 RPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYT 388
Query: 213 VWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEE 272
++ + + A I+ EMR G + T++ +Y +F + M+++ +E
Sbjct: 389 TLLSGFERAGKVESAMSIFEEMRNA-GCKPNICTFNAFIKMYGNRGKFTE---MMKIFDE 444
Query: 273 ----EIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHLK--SFSPVINTSYLVMLSTLRRL 326
+ P + ++ LL+++ EV V+ +K F P T + ++S R
Sbjct: 445 INVCGLSP-DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERET-FNTLISAYSRC 502
Query: 327 NDIEGITKCLEEWESQCVTYDIRMVSVAVNAYLRHDMDEEAESVLKR-ATMRCK 379
E VT D+ + + A R M E++E VL RCK
Sbjct: 503 GSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCK 556
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 82/172 (47%), Gaps = 4/172 (2%)
Query: 141 TYGALLNCYCKELMADKALALFDKMDEFRFVTSLA-FNNLMSMYMRLGRPEKVPQLVHDM 199
T ++++ Y + M KA + D M E F S+A +N+LM M+ R K +++ ++
Sbjct: 631 TLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREI 690
Query: 200 RQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQ 259
+ I +Y+ + + + + +A RI+ EMR G + D TY+ Y
Sbjct: 691 LAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRN-SGIVPDVITYNTFIGSYAADSM 749
Query: 260 FEKAEVMLR-MMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHLKSFSP 310
FE+A ++R M++ +P++ Y+ ++ Y + E + L++ P
Sbjct: 750 FEEAIGVVRYMIKHGCRPNQ-NTYNSIVDGYCKLNRKDEAKLFVEDLRNLDP 800
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 136/323 (42%), Gaps = 13/323 (4%)
Query: 57 QILNQYVMQGKAIRKSVLENCIRELRKYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLV 116
++LN+ V+ G + + I + A+E+ M + Y L
Sbjct: 335 KVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGF 394
Query: 117 CKTKGVVAAESFFEGL--LPCAKNKYTYGALLNCYCKELMADKALALFDKMDEFRFVTSL 174
+ V +A S FE + C N T+ A + Y + + +FD+++ +
Sbjct: 395 ERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDI 454
Query: 175 -AFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGE 233
+N L++++ + G +V + +M++ T++ +++ + +A +Y
Sbjct: 455 VTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRR 514
Query: 234 MRRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEE-EIKPHEREAYHCLLSLYAGT 292
M G D TY+ + A + +E++E +L ME+ KP+E Y LL YA
Sbjct: 515 MLDA-GVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNEL-TYCSLLHAYANG 572
Query: 293 RNRGEVYRVWDHLKSFSPVINTSYLVMLSTL----RRLNDIEGITKCLEEWESQCVTYDI 348
+ G ++ + + + +S VI V+L TL + + + + E + + + DI
Sbjct: 573 KEIGLMHSLAEEV--YSGVIEPR-AVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDI 629
Query: 349 RMVSVAVNAYLRHDMDEEAESVL 371
++ V+ Y R M +A VL
Sbjct: 630 TTLNSMVSIYGRRQMVAKANGVL 652
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 113/253 (44%), Gaps = 4/253 (1%)
Query: 56 SQILNQYVMQGKAIRKSVLENCIRELRKYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDL 115
SQ+LN+ + G + I F+ AL++ ME + + S +Y V LD
Sbjct: 358 SQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDG 417
Query: 116 VCKTKGVVAAESFFEGLL--PCAKNKYTYGALLNCYCKELMADKALALFDKMDEFRFVTS 173
+CK A F+ + + TY +++ CK D+A+ L ++M +
Sbjct: 418 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 477
Query: 174 L-AFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYG 232
+ ++ L++ + ++GR + ++V + + + + Y + +C L EA RIY
Sbjct: 478 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIY- 536
Query: 233 EMRRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLLSLYAGT 292
E ++G+ D T++ L KA + +AE +R M + ++ CL++ Y +
Sbjct: 537 EAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNS 596
Query: 293 RNRGEVYRVWDHL 305
+ + V+D +
Sbjct: 597 GEGLKAFSVFDEM 609
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 123/284 (43%), Gaps = 11/284 (3%)
Query: 97 MEMRKVNFSWDNYAVYLDLV--CKTKGVV--AAESFFE-GLLPCAKNKYTYGALLNCYCK 151
+E+ + FS N +Y L+ C KG + A + FFE G L N+ TY L+N K
Sbjct: 187 IELTEFGFS-PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFK 245
Query: 152 ELMADKALALFDKMDEFRFVTSL-AFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFT 210
+ + +++KM E +L +N +M+ + GR + Q+ +MR+R + + T
Sbjct: 246 NGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVT 305
Query: 211 YHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMM 270
Y+ + LNEA ++ +M+ DG + TY+ L + + KA + R +
Sbjct: 306 YNTLIGGLCREMKLNEANKVVDQMKS-DGINPNLITYNTLIDGFCGVGKLGKALSLCRDL 364
Query: 271 EEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHL--KSFSPVINTSYLVMLSTLRRLND 328
+ Y+ L+S + + ++ + + P +Y +++ T R ++
Sbjct: 365 KSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPS-KVTYTILIDTFARSDN 423
Query: 329 IEGITKCLEEWESQCVTYDIRMVSVAVNAYLRHDMDEEAESVLK 372
+E + E + D+ SV ++ + EA + K
Sbjct: 424 MEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFK 467
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 84/169 (49%), Gaps = 15/169 (8%)
Query: 73 VLENCIRELRKYRKFQHALEIMEWM--EMRKVNFSWDNYAVYLDL--VCKTKGVVAAESF 128
+LE+CI+E R +E + W+ +M + Y L + +C + V AA
Sbjct: 118 LLESCIKERR--------VEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 129 FEGLL--PCAKNKYTYGALLNCYCKELMADKALALFDKMDEFRFVTS-LAFNNLMSMYMR 185
F+ + C N++T+G L+ YCK + DK L L + M+ F + + + +N ++S + R
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 186 LGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEM 234
GR + ++V MR+ + T++ +++ + +A RI+ +M
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDM 278
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 14/184 (7%)
Query: 116 VCKTKGVVAAESFFEGL-------LPCAKNKYTYGALLNCYCKELMADKALALFDKMDEF 168
+CK V+ A F + LP N TY +L +CK + + A LF+ + E
Sbjct: 262 LCKEGKVLDASRIFSDMELDEYLGLP-RPNSITYNLMLKGFCKVGLLEDAKTLFESIREN 320
Query: 169 RFVTSL-AFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEA 227
+ SL ++N + +R G+ + ++ M + I S ++Y++ M+ L++A
Sbjct: 321 DDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDA 380
Query: 228 ERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLR-MMEEEIKPHEREAYHCLL 286
+ I G M+R +G D TY L Y + + A+ +L+ MM P+ AY C +
Sbjct: 381 KTIVGLMKR-NGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPN---AYTCNI 436
Query: 287 SLYA 290
L++
Sbjct: 437 LLHS 440
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 124/290 (42%), Gaps = 12/290 (4%)
Query: 108 NYAVYLDLVCKTKGVVAAESFFEGLL--PCAKNKYTYGALLNCYCKELMADKALALFDKM 165
Y +D +CK + +AE +L N TY +++N Y K+ M ++A++L KM
Sbjct: 366 TYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM 425
Query: 166 DEFRFV-TSLAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDL 224
++ V + ++ + G+ E +L +MR + + + +N +
Sbjct: 426 EDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRI 485
Query: 225 NEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAYHC 284
E + + +M G +D Y++L ++ K E A M+E P + +Y+
Sbjct: 486 KEVKGLVKDMVS-KGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNV 544
Query: 285 LLSLYAGTRNRGEVYRVWDHL----KSFSPVINTSYLVMLSTLRRLNDIEGITKCLEEWE 340
L+S G G+V W + K P I T + +M+++ R+ D EGI K ++ +
Sbjct: 545 LIS---GMLKFGKVGADWAYKGMREKGIEPDIAT-FNIMMNSQRKQGDSEGILKLWDKMK 600
Query: 341 SQCVTYDIRMVSVAVNAYLRHDMDEEAESVLKRATMRCKGPFFKIREMFM 390
S + + ++ V + EEA +L + + P +F+
Sbjct: 601 SCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFL 650
>AT1G43010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:16153609-16154468 FORWARD
LENGTH=257
Length = 257
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 106/235 (45%), Gaps = 16/235 (6%)
Query: 35 PAEKPNLYRQLSALEKTGGSVSQILNQYVMQGKAIRKSVLENCIRELRKYRKFQHALEIM 94
PA L ++ S+ +L Q+ QG + S L I+ L + F ALE
Sbjct: 32 PAANQTLPSRIKTDINQKASIIPLLEQWRKQGYEVNPSHLRGLIKNLSDCKNFTTALEAS 91
Query: 95 EWMEMRKVNFSWDNY----AVYLDLVCKTKGVVAAESFFEGLLPCAKNKYTYGALLNCYC 150
+WM V +DN+ A L LV G+ AE F+ + ++ Y LL+ Y
Sbjct: 92 KWMFKHSV---FDNFPEDCAAQLHLVNTVLGLEEAEKMFKNIPEKMRD---YSVLLSSYT 145
Query: 151 KEL-MADKALALFDKMDEFRF-VTSLAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISA 208
K + DKA A F KM E F + FN+++ +Y +L R + V +L++ +++ + + +
Sbjct: 146 KPVRTVDKAEATFKKMRELGFLLKPYLFNSMICLYGQLQRLDMVEKLLYKLKKNNMEVGS 205
Query: 209 FTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKA 263
+ N ++N E+ + + +G ++ T +A Y +A EKA
Sbjct: 206 LKVN---NVSRVYANINAMEKFKTWVSK-EGIELERDTIVAMAKAYHRAGSIEKA 256
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 12/222 (5%)
Query: 73 VLENCIRELRKYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLVCKTKGVVAAESFF--- 129
I L + R+ + A+EI++ M + V+ + Y + A +F
Sbjct: 626 TFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRL 685
Query: 130 --EGLLPCAKNKYTYGALLNCYCKELMADKALALFDKMDEFRFV-TSLAFNNLMSMYMRL 186
EGL + +TY ALL CK ALA+ +M S +N L+ + R
Sbjct: 686 QNEGL---DVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARR 742
Query: 187 GRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRT 246
G + L+ M++ + TY ++++C+ + D+N A + EM + G + +T
Sbjct: 743 GDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEAL-GVKPNIKT 801
Query: 247 YSNLAAIYVKAEQFEKAEVMLRMMEE-EIKPHEREAYHCLLS 287
Y+ L + +A EKA M+ IKP ++ YHCLL+
Sbjct: 802 YTTLIKGWARASLPEKALSCYEEMKAMGIKP-DKAVYHCLLT 842
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 104/235 (44%), Gaps = 11/235 (4%)
Query: 141 TYGALLNCYCKELMADKALALFDKMDEFRFVTSL-AFNNLMSMYMRLGRPEKVPQLVHDM 199
T+ +++ Y K ++L +FD M V ++ FN L++ + + EK +++ +M
Sbjct: 591 TFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEM 650
Query: 200 RQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQ 259
+ + TY M A+ D +A + ++ +G +D TY L K+ +
Sbjct: 651 TLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQN-EGLDVDIFTYEALLKACCKSGR 709
Query: 260 FEKAEVMLRMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHLK-----SFSPVINT 314
+ A + + M P Y+ L+ +A RG+V+ D ++ P I+T
Sbjct: 710 MQSALAVTKEMSARNIPRNSFVYNILIDGWA---RRGDVWEAADLIQQMKKEGVKPDIHT 766
Query: 315 SYLVMLSTLRRLNDIEGITKCLEEWESQCVTYDIRMVSVAVNAYLRHDMDEEAES 369
Y +S + D+ T+ +EE E+ V +I+ + + + R + E+A S
Sbjct: 767 -YTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALS 820
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 130/267 (48%), Gaps = 14/267 (5%)
Query: 73 VLENCIRELRKYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLVCKTKGVVAAESFFEGL 132
V N +R + + A ++ + M++ + + Y++ +D +C+ + A F +
Sbjct: 257 VYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADM 316
Query: 133 L--PCAKNKYTYGALLNCYCKELMADKALALFDKMDEFRF-VTSLAFNNLMSMYMRLGRP 189
L CA N T+ L+ + K +K L ++++M + ++ +N L+ + R
Sbjct: 317 LDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENL 376
Query: 190 EKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEM--RRVDGNMIDWRTY 247
E ++++ M +++ ++A T++ D+N A R+Y +M + + N + TY
Sbjct: 377 ENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTV---TY 433
Query: 248 SNLAAIYVKAEQFEKAEVMLRMMEE-EIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHL- 305
+ L ++V ++ + M + M++ E++P+ Y L++++ G + Y+++ +
Sbjct: 434 NILMRMFVGSKSTDMVLKMKKEMDDKEVEPNV-NTYRLLVTMFCGMGHWNNAYKLFKEMV 492
Query: 306 --KSFSPVINTSYLVMLSTLRRLNDIE 330
K +P ++ Y ++L+ LRR ++
Sbjct: 493 EEKCLTPSLSL-YEMVLAQLRRAGQLK 518
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 117/254 (46%), Gaps = 21/254 (8%)
Query: 111 VYLDLV---CKTKGVVAAESFFE-----GLLPCAKNKYTYGALLNCYCKELMADKALALF 162
VY +LV C+ + AE F+ G+ P N YTY +++ C+ +A +F
Sbjct: 257 VYTNLVRGWCRAGEISEAEKVFKEMKLAGIEP---NVYTYSIVIDALCRCGQISRAHDVF 313
Query: 163 -DKMDEFRFVTSLAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAAS 221
D +D ++ FNNLM ++++ GR EKV Q+ + M++ TY+ + +
Sbjct: 314 ADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRD 373
Query: 222 NDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVML-RMMEEEIKPHERE 280
+L A ++ M + ++ T++ + K A M +MME + +P+
Sbjct: 374 ENLENAVKVLNTMIKKKCE-VNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNT-V 431
Query: 281 AYHCLLSLYAGTRNRGEVYRVWDHL--KSFSPVINTSYLV--MLSTLRRLNDIEGITKCL 336
Y+ L+ ++ G+++ V ++ + K P +NT L+ M + N+ + K
Sbjct: 432 TYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFK-- 489
Query: 337 EEWESQCVTYDIRM 350
E E +C+T + +
Sbjct: 490 EMVEEKCLTPSLSL 503
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/276 (18%), Positives = 121/276 (43%), Gaps = 9/276 (3%)
Query: 83 KYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLVCKTKGVVAAESFFEGL--LPCAKNKY 140
K R+F A +++ M+ R V S + + + + + A F + C +K
Sbjct: 163 KVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKI 222
Query: 141 TYGALLNCYCKELMADKALALFDKMDEFRFVTSLAFNNLMSMYMRLGRPEKVPQLVHDMR 200
+ +++ ++ A +A + FD + + + + NL+ + R G + ++ +M+
Sbjct: 223 AFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMK 282
Query: 201 QRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQF 260
I + +TY + +++ ++ A ++ +M G + T++NL ++VKA +
Sbjct: 283 LAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLD-SGCAPNAITFNNLMRVHVKAGRT 341
Query: 261 EKAEVMLRMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDH-LKSFSPVINTSYLVM 319
EK + M++ + Y+ L+ + N +V + +K V +++ +
Sbjct: 342 EKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTI 401
Query: 320 LSTLRRLNDIEGI----TKCLE-EWESQCVTYDIRM 350
+ + D+ G +K +E + E VTY+I M
Sbjct: 402 FRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILM 437
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 93 IMEWMEMRKVNFSWD------NYAVYLDLV---------------CKTKGVVAAESFFEG 131
+ W RK+ +W+ +Y V D+V C + ++
Sbjct: 467 VQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNK 526
Query: 132 LLPCAKNKYTYGALLNCYCKELMADKALALFDKMDEFRFVTSL-AFNNLMSMYMRLGRPE 190
+ P N T G ++N YC+E ++AL F +M E +L FN+L+ ++ + +
Sbjct: 527 VKP---NVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMD 583
Query: 191 KVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNM-IDWRTYSN 249
V ++V M + + T+ MN+ ++ D+ E IY +M ++G + D +S
Sbjct: 584 GVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDM--LEGGIDPDIHAFSI 641
Query: 250 LAAIYVKAEQFEKAEVMLRMMEE-EIKPH 277
LA Y +A + EKAE +L M + ++P+
Sbjct: 642 LAKGYARAGEPEKAEQILNQMRKFGVRPN 670
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 109/235 (46%), Gaps = 14/235 (5%)
Query: 131 GLLPCAKNKYTYGALLNCYCKELMADKALALFDKMDEFRF-VTSLAFNNLMSMYMRLGRP 189
GL P + + A++N + D+A+ +F+KM E T+ FN L+ Y ++G+
Sbjct: 384 GLKP---DTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKL 440
Query: 190 EKVPQLVHDM-RQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYS 248
E+ +L+ M R + + T ++ + + + EA I +M+ G D T++
Sbjct: 441 EESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSY-GVKPDVVTFN 499
Query: 249 NLAAIYVKAEQFEKAEVML--RMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHLK 306
LA Y + AE M+ RM+ ++KP+ R +++ Y E R + +K
Sbjct: 500 TLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTC-GTIVNGYCEEGKMEEALRFFYRMK 558
Query: 307 SFSPVINTSYLVMLSTLR---RLNDIEGITKCLEEWESQCVTYDIRMVSVAVNAY 358
++ + V S ++ +ND++G+ + ++ E V D+ S +NA+
Sbjct: 559 ELG--VHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAW 611
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 104/235 (44%), Gaps = 8/235 (3%)
Query: 83 KYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLVCKTKGVVAAESFFEGLLP--CAKNKY 140
K Q+A+E+ + M+ +++ Y LD K + A+ + ++
Sbjct: 492 KLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPI 551
Query: 141 TYGALLNCYCKELMADKALALFDKMDEFRF-VTSLAFNNLMSMYMRLGRPEKVPQLVHDM 199
+Y L+N C + +A ++D+M T + N+++ Y R G + M
Sbjct: 552 SYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM 611
Query: 200 RQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMI-DWRTYSNLAAIYVKAE 258
+Y+ + ++++A + +M G ++ D TY+++ + +
Sbjct: 612 ISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQN 671
Query: 259 QFEKAEVMLR-MMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHL--KSFSP 310
Q ++AEV+LR M+E + P +R Y C+++ + N E +R+ D + + FSP
Sbjct: 672 QMKEAEVVLRKMIERGVNP-DRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 131/301 (43%), Gaps = 17/301 (5%)
Query: 93 IMEWMEMRKVNFSWDN--YAVYLDLVCKTKGVVAAESFFEGLL--PCAKNKYTYGALLNC 148
+M + +++ DN Y + + C+ + A + +L CA + TY +L+
Sbjct: 395 LMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHG 454
Query: 149 YCKELMADKALALFDKMDE-FRFVTSLAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPIS 207
CK M +A LF++M E F S L+ + +LG + +L M+++RI +
Sbjct: 455 LCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLD 514
Query: 208 AFTYHVWMNSCAASNDLNEAERIYGEM--RRVDGNMIDWRTYSNLAAIYVKAEQFEKAEV 265
TY+ ++ D++ A+ I+ +M + + I + N A+ K E V
Sbjct: 515 VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVN--ALCSKGHLAEAFRV 572
Query: 266 MLRMMEEEIKPHEREAYHCLLSLY--AGTRNRGEVYRVWDHLKSFSPVINTSYLVMLSTL 323
M+ + IKP + ++ Y +G + GE + + F P SY ++
Sbjct: 573 WDEMISKNIKPTVMIC-NSMIKGYCRSGNASDGESFLEKMISEGFVPDC-ISYNTLIYGF 630
Query: 324 RRLNDIE---GITKCLEEWESQCVTYDIRMVSVAVNAYLRHDMDEEAESVLKRATMRCKG 380
R ++ G+ K +EE + V D+ + ++ + R + +EAE VL++ R
Sbjct: 631 VREENMSKAFGLVKKMEEEQGGLVP-DVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVN 689
Query: 381 P 381
P
Sbjct: 690 P 690
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 102/227 (44%), Gaps = 4/227 (1%)
Query: 135 CAKNKYTYGALLNCYCKELMADKALALFDKMDEFRFVTSL-AFNNLMSMYMRLGRPEKVP 193
C N++ Y +++ +E + DK L +FD+M S+ ++ L++ Y R GR E
Sbjct: 137 CKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSL 196
Query: 194 QLVHDMRQRRIPISAFTYHVWMNSCAASN-DLNEAERIYGEMRRVDGNMIDWRTYSNLAA 252
+L+ M+ +I S TY+ +N+CA D ++ EMR +G D TY+ L +
Sbjct: 197 ELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRH-EGIQPDIVTYNTLLS 255
Query: 253 IYVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHLKSFSPVI 312
++AE++ R M + + Y L+ + R +V + + S +
Sbjct: 256 ACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLP 315
Query: 313 N-TSYLVMLSTLRRLNDIEGITKCLEEWESQCVTYDIRMVSVAVNAY 358
+ TSY V+L + I+ + ++ T + SV +N +
Sbjct: 316 DITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLF 362
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 109/244 (44%), Gaps = 40/244 (16%)
Query: 118 KTKGVVAAESFFEGLLP--CAKNKYTYGALLNCYCKELMADKALALFDKMDEFRF-VTSL 174
K +G A +E + C + TY +N YC+ +KA LFD+M + F +
Sbjct: 365 KQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVV 424
Query: 175 AFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEM 234
A++N+M MY + R +L+ M+QR + + Y+ ++ + DL AE+I+ EM
Sbjct: 425 AYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEM 484
Query: 235 RRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLLSLYAGTR- 293
+R + D +Y+++ + Y ++++ E+ + LY R
Sbjct: 485 KRAK-VLPDKVSYTSMISAYNRSKELERC----------------------VELYQEFRM 521
Query: 294 NRGEVYRVWDHLKSFSPVINTSYLVMLSTLRRLNDIEGITKCLEEWESQCVTYDIRMVSV 353
NRG++ R +M+ + + I+ + + L++ + + D R+ S
Sbjct: 522 NRGKIDRAMAG-------------IMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLYSS 568
Query: 354 AVNA 357
A+NA
Sbjct: 569 ALNA 572
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 135/304 (44%), Gaps = 12/304 (3%)
Query: 74 LENCIRELRKYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLVCKTKGVVA-AESFFEGL 132
L N + L K + + + M M + + +Y + + ++K V+ S+F+ +
Sbjct: 341 LNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKM 400
Query: 133 LP--CAKNKYTYGALLNCYCKELMADKALALFDKMDEFRFVT-SLAFNNLMSMYMRLGRP 189
+ +++TY L++ YCK +KAL L ++MDE F A+ +L++ + R
Sbjct: 401 KADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRY 460
Query: 190 EKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSN 249
E +L ++++ +S+ Y V + L+EA ++ EM+ G+ D Y+
Sbjct: 461 EAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKN-QGSGPDVYAYNA 519
Query: 250 LAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLLSLYAGT---RNRGEVYRVWDHLK 306
L + VKA +A +LR MEE + +++ +L+ +A T R E++ H
Sbjct: 520 LMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKH-S 578
Query: 307 SFSPVINTSYLVMLSTLRRLNDIEGITKCLEEWESQCVTYDIRMVSVAVNAYLRHDMDEE 366
P +Y +L E + + E + + YD S ++A ++D E
Sbjct: 579 GIKP-DGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV--GNVDHE 635
Query: 367 AESV 370
+ V
Sbjct: 636 KDDV 639
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 124/292 (42%), Gaps = 13/292 (4%)
Query: 58 ILNQYVMQGKAIRKSVLENCIRELRKYRKFQHALEIMEWMEMRKVNFSWDNY-AVYLDLV 116
+ N YV ++ +VL ++ L + + AL + + RK + Y +V L L+
Sbjct: 153 VRNTYV----SVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLM 208
Query: 117 CKTKGVVAAESFFE--GLLPCAKNKYTYGALLNCYCKELMADKALALFDKM-DEFRFVTS 173
+ + E + E C + TY AL++ Y K D A+ LFD+M D T
Sbjct: 209 QEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTE 268
Query: 174 LAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGE 233
+ L+ +Y ++G+ EK L +M++ + +TY + + ++EA Y +
Sbjct: 269 KIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKD 328
Query: 234 MRRVDGNMIDWRTYSNLAAIYVKAEQFEK-AEVMLRMMEEEIKPHEREAYHCLLSLYAGT 292
M R DG D +NL I K + E+ V M P + +L+
Sbjct: 329 MLR-DGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESK 387
Query: 293 RNRGEVYRVWDHLK--SFSPVINTSYLVMLSTLRRLNDIEGITKCLEEWESQ 342
+ EV +D +K S SP +Y +++ + N +E LEE + +
Sbjct: 388 AHVSEVSSWFDKMKADSVSPS-EFTYSILIDGYCKTNRVEKALLLLEEMDEK 438
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 115/244 (47%), Gaps = 9/244 (3%)
Query: 83 KYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLVCKTKGVVAAES-FFEGLLPCAK---N 138
K +K + A E+++ ME V Y + V AES E ++ K N
Sbjct: 200 KKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPN 259
Query: 139 KYTYGALLNCYCKELMADKALALFDKMDEFRFVTSLA-FNNLMSMYMRLGRPEKVPQLVH 197
T G ++ YC+E L +M E R +L FN+L++ ++ + + + +++
Sbjct: 260 GRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLT 319
Query: 198 DMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKA 257
M++ + TY MN+ +++ + +A +++ EM + G D YS LA YV+A
Sbjct: 320 LMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKA-GVKPDAHAYSILAKGYVRA 378
Query: 258 EQFEKAEVMLRMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHLKSF--SPVINTS 315
++ +KAE +L + E +P+ + ++S + + + RV++ + F SP I T
Sbjct: 379 KEPKKAEELLETLIVESRPN-VVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTF 437
Query: 316 YLVM 319
+M
Sbjct: 438 ETLM 441
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 4/197 (2%)
Query: 135 CAKNKYTYGALLNCYCKELMADKALALFDKMD-EFRFVTSLAFNNLMSMYMRLGRPEKVP 193
C + +TY A+++ Y + +A +A LF +++ + F ++ +N+L+ + R EKV
Sbjct: 328 CQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVK 387
Query: 194 QLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAI 253
++ M++ TY+ ++ L+ A ++Y +M+ + G D TY+ L
Sbjct: 388 EVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDS 447
Query: 254 YVKAEQ-FEKAEVMLRMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWD-HLKSFSPV 311
KA + E A +M M++ IKP + Y L+ YA R E + L+S +
Sbjct: 448 LGKANRTVEAAALMSEMLDVGIKP-TLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKP 506
Query: 312 INTSYLVMLSTLRRLND 328
N +Y VML L R N+
Sbjct: 507 DNLAYSVMLDVLLRGNE 523
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 106/231 (45%), Gaps = 18/231 (7%)
Query: 87 FQHALEIMEWMEMRKVNFSWDN-----YAVYLDLVCKTKGVVAAESFFEGLLPCAKNKY- 140
+Q ALE+ EW+ +R W + A L ++ + A F P ++
Sbjct: 171 WQRALEVFEWLNLRH----WHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQ 226
Query: 141 TYGALLNCYCKELMADKALALFDKMDEFRFVTSL-AFNNLMSMYMRLG--RPEKVPQLVH 197
Y A++ Y + KA L D M + V L +FN L++ ++ G P +L+
Sbjct: 227 VYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLD 286
Query: 198 DMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKA 257
+R + A TY+ +++C+ ++L+ A +++ +M W TY+ + ++Y +
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLW-TYNAMISVYGRC 345
Query: 258 EQFEKAEVMLRMMEEEIKPHEREA--YHCLLSLYAGTRNRGEVYRVWDHLK 306
+AE + ME E+K +A Y+ LL +A RN +V V+ ++
Sbjct: 346 GLAAEAERLF--MELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQ 394
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 142/330 (43%), Gaps = 16/330 (4%)
Query: 58 ILNQYVMQGKAIRKSVLENCIRELRKYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLVC 117
+++Q + G I L + K A+ +++ M + Y V ++ +C
Sbjct: 173 LVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLC 232
Query: 118 KTKGVVAAESFF----EGLLPCAKNKYTYGALLNCYCKELMADKALALFDKMDEFRFVTS 173
K A + +G L Y +++ CK D AL LF +M+ +
Sbjct: 233 KRGDTDLAFNLLNKMEQGKL--EPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN 290
Query: 174 L-AFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYG 232
+ +++L+S GR +L+ DM +R+I FT+ +++ L EAE++Y
Sbjct: 291 VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 350
Query: 233 EM--RRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLLSLYA 290
EM R +D +++ TYS+L + ++ ++A+ M M + + Y+ L+ +
Sbjct: 351 EMVKRSIDPSIV---TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC 407
Query: 291 GTRNRGEVYRVWDHLKSFSPVINT-SYLVMLSTLRRLNDIEGITKCLEEWESQCVTYDIR 349
+ E V+ + V NT +Y +++ L + D + + +E S V +I
Sbjct: 408 KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 467
Query: 350 MVSVAVNAYLRHDMDEEAESV---LKRATM 376
+ ++ ++ E+A V L+R+ M
Sbjct: 468 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 113/244 (46%), Gaps = 18/244 (7%)
Query: 61 QYVMQGKAIRKSVLENCIRELRKYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLVCKTK 120
++VM + S + C+ L++ R ++ + WM K+ S+ V +V +
Sbjct: 143 RFVMSSFVAKLSFRDMCVV-LKEQRGWRQVRDFFSWM---KLQLSYRPSVVVYTIVLRLY 198
Query: 121 GVV-----AAESFFEGL-LPCAKNKYTYGALLNCYCKELMADKALALFDKMDEFRFVTSL 174
G V A E+F E L + C + G +L Y + L + + E R + S
Sbjct: 199 GQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLST 258
Query: 175 A-FNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGE 233
+ +N ++S + KV L +M + +P + FTY + ++S A EA + +GE
Sbjct: 259 SVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGE 318
Query: 234 MRRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLR-MMEEEIKPHEREAYHC--LLSLYA 290
M+ + G + + TYS++ ++ VKA +EKA + M + I P Y C +LSLY
Sbjct: 319 MKSL-GFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSN---YTCATMLSLYY 374
Query: 291 GTRN 294
T N
Sbjct: 375 KTEN 378
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 97/214 (45%), Gaps = 11/214 (5%)
Query: 68 AIRKSVLENCIRELRKYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLVCKTKGVVAAES 127
A+ S+L N + K+R+ +H I + + Y + + + + A
Sbjct: 739 AVTISILVNALTNRGKHREAEH---ISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASE 795
Query: 128 FFEGL----LPCAKNKYTYGALLNCYCKELMADKALALFDKMDEFR-FVTSLAFNNLMSM 182
+E + +PC+ TY +++ Y + L DKA+ +F ++ + N++
Sbjct: 796 IYERMHTSGVPCSIQ--TYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMH 853
Query: 183 YMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMI 242
Y + G+ + L +M+++ I +Y++ + CA S +E + + M R +G
Sbjct: 854 YGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMER-NGRCT 912
Query: 243 DWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKP 276
D TY L +Y ++ QF +AE + +++E+ P
Sbjct: 913 DLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIP 946
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 117/277 (42%), Gaps = 38/277 (13%)
Query: 130 EGLLPCAKNKYTYGALLNCYCKELMADKALALFDKMDEFRFVTS-LAFNNLMSMYMRLGR 188
EG+ P N++TY +++ Y K+ ++AL F +M FV + +++++S+ ++ G
Sbjct: 287 EGVPP---NEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGD 343
Query: 189 PEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRR--------VDGN 240
EK L DMR + I S +T ++ + + +A ++ +M R + G
Sbjct: 344 WEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGL 403
Query: 241 MI--------------------------DWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEI 274
+I D +TY ++ +++ + KA ++ MM+
Sbjct: 404 IIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRD 463
Query: 275 KPHEREAYHCLLSLYAGTRNRGEVYRVWDHLKSFSPVINTSYLVMLSTLRRLNDIEGITK 334
P R AY +L YA +N + L +S ML+ RLN E
Sbjct: 464 IPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGLPDASSCNDMLNLYTRLNLGEKAKG 523
Query: 335 CLEEWESQCVTYDIRMVSVAVNAYLRHDMDEEAESVL 371
+++ V +DI + A+ Y + M EA+ ++
Sbjct: 524 FIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLI 560
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 119/302 (39%), Gaps = 56/302 (18%)
Query: 78 IRELRKYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLVCKTKGVVAAESFFEGLLP--C 135
I K K + A ++++ M R + + Y +D CK + A + ++ C
Sbjct: 340 IDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC 399
Query: 136 AKNKYTYGALLNCYCKELMADKALALFDKMDEFRFV--TSLAFNNLMSMYMRLGRPEKVP 193
+ T+ L+N YCK D L LF +M R V ++ +N L+ + + G+ E
Sbjct: 400 DPDIMTFNILINGYCKANRIDDGLELFREM-SLRGVIANTVTYNTLVQGFCQSGKLEVAK 458
Query: 194 QLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRR----------------- 236
+L +M RR+ +Y + ++ + +L +A I+G++ +
Sbjct: 459 KLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGM 518
Query: 237 -----------------VDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKPHER 279
+ G +D R Y+ + + + + KA+++ R M EE +
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDE 578
Query: 280 EAYHCLLSLYAGTRNRGEVYRVWDHLKS---------FSPVINT--------SYLVMLST 322
Y+ L+ + G + + + +KS VIN S+L MLST
Sbjct: 579 LTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDMLST 638
Query: 323 LR 324
R
Sbjct: 639 TR 640
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 98/211 (46%), Gaps = 7/211 (3%)
Query: 142 YGALLNCYCKELMADKALALFDKMDEFRFVTSL-AFNNLMSMYMRLGRPEKVPQLVHDMR 200
Y +++ CK+ D A LF++M+ F + +N L+ + GR + +L+ DM
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 201 QRRIPISAFTYHVWMNSCAASNDLNEAERIYGEM--RRVDGNMIDWRTYSNLAAIYVKAE 258
+R+I + T+ V ++S L EA+++ EM R + N I TY++L + K
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI---TYNSLIDGFCKEN 382
Query: 259 QFEKAEVMLRMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHLKSFSPVINT-SYL 317
+ E+A M+ +M + + ++ L++ Y + ++ + + NT +Y
Sbjct: 383 RLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYN 442
Query: 318 VMLSTLRRLNDIEGITKCLEEWESQCVTYDI 348
++ + +E K +E S+ V DI
Sbjct: 443 TLVQGFCQSGKLEVAKKLFQEMVSRRVRPDI 473
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/275 (19%), Positives = 109/275 (39%), Gaps = 37/275 (13%)
Query: 83 KYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLVCKTKGVVAAESFFEGLLP--CAKNKY 140
K K + A E+ + M R ++ Y +D CK + A + ++ C N
Sbjct: 329 KEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIR 388
Query: 141 TYGALLNCYCKELMADKALALFDKMDEFRFVT-SLAFNNLMSMYMRLGRPEKVPQLVHDM 199
T+ L+N YCK + D L LF KM V ++ +N L+ + LG+ E +L +M
Sbjct: 389 TFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448
Query: 200 RQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRR----------------------- 236
RR+ +Y + ++ + + +A I+ ++ +
Sbjct: 449 VSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 508
Query: 237 -----------VDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAYHCL 285
+ G D +TY+ + K +A+++ R MEE+ Y+ L
Sbjct: 509 DDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNIL 568
Query: 286 LSLYAGTRNRGEVYRVWDHLKSFSPVINTSYLVML 320
+ + G + + ++ + +K ++ S + M+
Sbjct: 569 IRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMV 603
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/241 (19%), Positives = 107/241 (44%), Gaps = 7/241 (2%)
Query: 141 TYGALLNCYCKELMADKALALFDKMDEFRFVTS-LAFNNLMSMYMRLGRPEKVPQLVHDM 199
T AL+N C A+ L D+M E F + + + ++ + + G+ +L+ M
Sbjct: 179 TLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM 238
Query: 200 RQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQ 259
+R+I + A Y + ++ L+ A ++ EM + G D Y+ L + A +
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM-EIKGFKADIIIYTTLIRGFCYAGR 297
Query: 260 FEKAEVMLR-MMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHL--KSFSPVINTSY 316
++ +LR M++ +I P + A+ L+ + E + + + SP +Y
Sbjct: 298 WDDGAKLLRDMIKRKITP-DVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD-TVTY 355
Query: 317 LVMLSTLRRLNDIEGITKCLEEWESQCVTYDIRMVSVAVNAYLRHDMDEEAESVLKRATM 376
++ + N ++ L+ S+ +IR ++ +N Y + ++ ++ + ++ ++
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 415
Query: 377 R 377
R
Sbjct: 416 R 416
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 101/234 (43%), Gaps = 3/234 (1%)
Query: 142 YGALLNCYCKELMADKALALFDKMDEFRFVTSLA-FNNLMSMYMRLGRPEKVPQLVHDMR 200
Y +++ CK+ D A LF++M+ F + + L+ + GR + +L+ DM
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 201 QRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQF 260
+R+I + ++ L EAE ++ EM + G D TY++L + K Q
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ-RGISPDTVTYTSLIDGFCKENQL 368
Query: 261 EKAEVMLRMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHLKSFSPVINT-SYLVM 319
+KA ML +M + ++ L++ Y + ++ + V +T +Y +
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428
Query: 320 LSTLRRLNDIEGITKCLEEWESQCVTYDIRMVSVAVNAYLRHDMDEEAESVLKR 373
+ L +E + +E S+ V DI + ++ + E+A + ++
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK 482
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 83/402 (20%), Positives = 162/402 (40%), Gaps = 47/402 (11%)
Query: 48 LEKTGGSVSQILNQYVMQG-KAIRKSVLENCIRELRKYRKFQHALEIMEWMEMRKVNFSW 106
+E TG +V +L QY G + + + ++ + ++ +K+ EI+EW+ + +W
Sbjct: 80 IESTGSAVP-VLRQYKTDGDQGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRYQ----NW 134
Query: 107 DNYAVYLDLVCKTKGVVAAESFFEGLLPCAKNKYTYGALLNCYCKELMADKALALFDKMD 166
N++ L+ T YG L N A++ L++ KM
Sbjct: 135 WNFSEIDFLMLIT---------------------AYGKLGNFNG----AERVLSVLSKMG 169
Query: 167 EFRFVTSLAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNE 226
V S + LM Y R G+ + M+ SA TY + + + + E
Sbjct: 170 STPNVIS--YTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKE 227
Query: 227 AERIYGEMRRVDGNMI--DWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAYHC 284
AE ++ + + + D + Y + +Y KA +EKA + M + P Y+
Sbjct: 228 AEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNS 287
Query: 285 LLSLYAGTRNRGEVYRVWDHLK--SFSPVINTSYLVMLSTLRRLNDIEGITKCLEEWESQ 342
L+S + EV +++D ++ P + SY +++ R E EE
Sbjct: 288 LMSFETSYK---EVSKIYDQMQRSDIQPDV-VSYALLIKAYGRARREEEALSVFEEMLDA 343
Query: 343 CVTYDIRMVSVAVNAYLRHDMDEEAESVLKRATMRCKGPFFKIREMFMMF--YLKKDQLD 400
V + ++ ++A+ M E+A++V K +MR F + M Y+ ++
Sbjct: 344 GVRPTHKAYNILLDAFAISGMVEQAKTVFK--SMRRDRIFPDLWSYTTMLSAYVNASDME 401
Query: 401 GALSHLQAAHSEATIWRPSPEVVGAFLKYYDEKTDLDGVDEL 442
GA + + + P+ G +K Y + D++ + E+
Sbjct: 402 GAEKFFKRIKVDG--FEPNIVTYGTLIKGYAKANDVEKMMEV 441
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 5/194 (2%)
Query: 108 NYAVYLDLVCKTKGVVAAESFFEGLLP-CAKNKYTYGALLNCYCKELMADKALALFDKMD 166
++ LD++CK+K V A F L + + TY +LN +C KAL + +M
Sbjct: 163 SFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMV 222
Query: 167 EFRFVTSL-AFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLN 225
E +L +N ++ + R G+ + +M++R I TY ++ + ++
Sbjct: 223 ERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIK 282
Query: 226 EAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAYHCL 285
A ++ EM R +G + TY+ + + K + E A VM M Y+ L
Sbjct: 283 RARNVFDEMIR-EGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVL 341
Query: 286 LS--LYAGTRNRGE 297
+ +AG +RGE
Sbjct: 342 IRGLFHAGEFSRGE 355
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 83/402 (20%), Positives = 162/402 (40%), Gaps = 47/402 (11%)
Query: 48 LEKTGGSVSQILNQYVMQG-KAIRKSVLENCIRELRKYRKFQHALEIMEWMEMRKVNFSW 106
+E TG +V +L QY G + + + ++ + ++ +K+ EI+EW+ + +W
Sbjct: 87 IESTGSAVP-VLRQYKTDGDQGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRYQ----NW 141
Query: 107 DNYAVYLDLVCKTKGVVAAESFFEGLLPCAKNKYTYGALLNCYCKELMADKALALFDKMD 166
N++ L+ T YG L N A++ L++ KM
Sbjct: 142 WNFSEIDFLMLIT---------------------AYGKLGNFNG----AERVLSVLSKMG 176
Query: 167 EFRFVTSLAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNE 226
V S + LM Y R G+ + M+ SA TY + + + + E
Sbjct: 177 STPNVIS--YTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKE 234
Query: 227 AERIYGEMRRVDGNMI--DWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAYHC 284
AE ++ + + + D + Y + +Y KA +EKA + M + P Y+
Sbjct: 235 AEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNS 294
Query: 285 LLSLYAGTRNRGEVYRVWDHLK--SFSPVINTSYLVMLSTLRRLNDIEGITKCLEEWESQ 342
L+S + EV +++D ++ P + SY +++ R E EE
Sbjct: 295 LMSFETSYK---EVSKIYDQMQRSDIQPDV-VSYALLIKAYGRARREEEALSVFEEMLDA 350
Query: 343 CVTYDIRMVSVAVNAYLRHDMDEEAESVLKRATMRCKGPFFKIREMFMMF--YLKKDQLD 400
V + ++ ++A+ M E+A++V K +MR F + M Y+ ++
Sbjct: 351 GVRPTHKAYNILLDAFAISGMVEQAKTVFK--SMRRDRIFPDLWSYTTMLSAYVNASDME 408
Query: 401 GALSHLQAAHSEATIWRPSPEVVGAFLKYYDEKTDLDGVDEL 442
GA + + + P+ G +K Y + D++ + E+
Sbjct: 409 GAEKFFKRIKVDG--FEPNIVTYGTLIKGYAKANDVEKMMEV 448
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 140/337 (41%), Gaps = 46/337 (13%)
Query: 72 SVLENCIRELRKYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLVCKTK-GVVAAESFFE 130
SV + ++ + AL I+ + +Y LD ++K + AE+ F+
Sbjct: 135 SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFK 194
Query: 131 GLL--PCAKNKYTYGALLNCYCKELMADKALALFDKM----------------------- 165
+L + N +TY L+ +C D AL LFDKM
Sbjct: 195 EMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLR 254
Query: 166 ---DEFRFVTSLA----------FNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYH 212
D F+ + S+A +N +++ R GR ++V ++ +M +R + TY+
Sbjct: 255 KIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYN 314
Query: 213 VWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKA-EVMLRMME 271
+ + ++A ++ EM R G TY++L KA +A E + +M
Sbjct: 315 TLIKGYCKEGNFHQALVMHAEMLR-HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373
Query: 272 EEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHL--KSFSPVINTSYLVMLSTLRRLNDI 329
+ P+ER Y L+ ++ E YRV + FSP + T Y +++ +
Sbjct: 374 RGLCPNER-TYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVT-YNALINGHCVTGKM 431
Query: 330 EGITKCLEEWESQCVTYDIRMVSVAVNAYLR-HDMDE 365
E LE+ + + ++ D+ S ++ + R +D+DE
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDE 468
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 100/227 (44%), Gaps = 6/227 (2%)
Query: 65 QGKAIRKSVLENCIRELRKYRKFQHALEIMEWMEMRKVNFSWDNYAV--YLDLVCKTKGV 122
+ K + + +R L K K+ A++ ME + D A+ +D + K +
Sbjct: 197 ESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEME-KSYGVKTDTIAMNSLMDALVKENSI 255
Query: 123 VAAESFFEGLLPCAK-NKYTYGALLNCYCKELMADKALALFDKMDEFRFVTSL-AFNNLM 180
A F L K + T+ L++ +CK D A A+ D M F + + + +
Sbjct: 256 EHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFV 315
Query: 181 SMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGN 240
Y + G +V +++ +MR+ + TY + M+S S + EA +Y +M+ DG
Sbjct: 316 EAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKE-DGC 374
Query: 241 MIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLLS 287
+ D + YS+L I K +F+ A + M + + Y+ ++S
Sbjct: 375 VPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMIS 421
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 14/218 (6%)
Query: 98 EMRKVNFSWDNYAVYLDLVCKTKGVVAAESFFE--------GLLPCAKNKYTYGALLNCY 149
EM K DNY Y L+C + E + G+LP + YTY +++
Sbjct: 565 EMVKRGLKPDNYT-YSILICGLFNMNKVEEAIQFWDDCKRNGMLP---DVYTYSVMIDGC 620
Query: 150 CKELMADKALALFDKMDEFRF-VTSLAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISA 208
CK ++ FD+M ++ +N+L+ Y R GR +L DM+ + I ++
Sbjct: 621 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNS 680
Query: 209 FTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLR 268
TY + + + + EA+ ++ EM R++G + Y+ L Y K Q K E +LR
Sbjct: 681 ATYTSLIKGMSIISRVEEAKLLFEEM-RMEGLEPNVFHYTALIDGYGKLGQMVKVECLLR 739
Query: 269 MMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHLK 306
M + + Y ++ YA N E R+ + ++
Sbjct: 740 EMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMR 777
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 14/218 (6%)
Query: 98 EMRKVNFSWDNYAVYLDLVCKTKGVVAAESFFE--------GLLPCAKNKYTYGALLNCY 149
EM K DNY Y L+C + E + G+LP + YTY +++
Sbjct: 565 EMVKRGLKPDNYT-YSILICGLFNMNKVEEAIQFWDDCKRNGMLP---DVYTYSVMIDGC 620
Query: 150 CKELMADKALALFDKMDEFRF-VTSLAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISA 208
CK ++ FD+M ++ +N+L+ Y R GR +L DM+ + I ++
Sbjct: 621 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNS 680
Query: 209 FTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLR 268
TY + + + + EA+ ++ EM R++G + Y+ L Y K Q K E +LR
Sbjct: 681 ATYTSLIKGMSIISRVEEAKLLFEEM-RMEGLEPNVFHYTALIDGYGKLGQMVKVECLLR 739
Query: 269 MMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHLK 306
M + + Y ++ YA N E R+ + ++
Sbjct: 740 EMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMR 777
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 3/157 (1%)
Query: 83 KYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLVCKTKGVVAAESFFEGLLP--CAKNKY 140
K K A E+ M R + Y +D CK + A F+ ++ C +
Sbjct: 327 KEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIV 386
Query: 141 TYGALLNCYCKELMADKALALFDKMDEFRFV-TSLAFNNLMSMYMRLGRPEKVPQLVHDM 199
TY L+N YCK D + LF ++ + ++ +N L+ + + G+ +L +M
Sbjct: 387 TYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM 446
Query: 200 RQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRR 236
R +P S TY + ++ + +LN+A I+ +M++
Sbjct: 447 VSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQK 483
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 82/182 (45%), Gaps = 4/182 (2%)
Query: 90 ALEIMEWMEMRKVNFSWDNYAVYLDLVCKTKGVVAAESFFE--GLLPCAKNKYTYGALLN 147
AL++ ME R + S Y++ +D +CK A S F + + TY +L+
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 148 CYCKELMADKALALFDKMDEFRFVTS-LAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPI 206
C + D + +M + + F+ L+ ++++ G+ + +L ++M R I
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348
Query: 207 SAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVM 266
TY+ ++ N L+EA +++ ++ G D TYS L Y KA++ + +
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMF-DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 267 LR 268
R
Sbjct: 408 FR 409
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 98/221 (44%), Gaps = 10/221 (4%)
Query: 58 ILNQYVMQGKAIRKSVLENCIRELRKYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLVC 117
+++Q V +G + L K AL ++ ME ++ + + +D +C
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLC 269
Query: 118 KTKGVVAAESFF-----EGLLPCAKNKYTYGALLNCYCKELMADKALALFDKMDEFRFVT 172
K + V A F +G+ P N TY +L+NC C A L M E +
Sbjct: 270 KYRHVEVAVDLFTEMETKGIRP---NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINP 326
Query: 173 SL-AFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIY 231
++ FN L+ + + G+ + +L +M QR I TY++ +N N L+EA++++
Sbjct: 327 NVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMF 386
Query: 232 GEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEE 272
M D + + +TY+ L + K ++ E + R M +
Sbjct: 387 KFMVSKDC-LPNIQTYNTLINGFCKCKRVEDGVELFREMSQ 426
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/297 (19%), Positives = 121/297 (40%), Gaps = 11/297 (3%)
Query: 83 KYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLVCKTKGVVAAESFFEGLLPCA--KNKY 140
K KF+ + + E M+ ++ Y+++++ C+ + A + ++ +
Sbjct: 95 KMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIV 154
Query: 141 TYGALLNCYCKELMADKALALFDKMDEFRF-VTSLAFNNLMSMYMRLGRPEKVPQLVHDM 199
T +LLN YC A+AL D+M E + + F L+ + + LV M
Sbjct: 155 TLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQM 214
Query: 200 RQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMR--RVDGNMIDWRTYSNLAAIYVKA 257
QR TY +N D++ A + +M R+ N++ + T + Y
Sbjct: 215 VQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHV 274
Query: 258 EQFEKAEVMLRMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHL--KSFSPVINTS 315
E ++ M + I+P+ Y+ L++ + R+ ++ K +P + T
Sbjct: 275 EV--AVDLFTEMETKGIRPNV-VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTF 331
Query: 316 YLVMLSTLRRLNDIEGITKCLEEWESQCVTYDIRMVSVAVNAYLRHDMDEEAESVLK 372
++ + + +E K EE + + D ++ +N + H+ +EA+ + K
Sbjct: 332 NALIDAFFKEGKLVEA-EKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFK 387
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 127/274 (46%), Gaps = 18/274 (6%)
Query: 77 CIRELRKYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLVCKTKGVVAAESFFEGLLPCA 136
I L +++ A E+ E M+ K+N DN + + K +A+ +E +
Sbjct: 279 AISGLSASQRYDDAWEVYEAMD--KINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMS 336
Query: 137 K-----NKYTYGALLNCYCKELMADKALALFDKMDEFRFVT-SLAFNNLMSMYMRLGRPE 190
+ ++ +G L+ +C E + ++AL + +M++ + ++ +N LM Y + E
Sbjct: 337 EKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIE 396
Query: 191 KVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNL 250
+V L +MR + + SA TY++ M++ A + E + EM + G + ++Y+ L
Sbjct: 397 EVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDL-GLEPNVKSYTCL 455
Query: 251 AAIYVKAEQFE--KAEVMLRMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHL--K 306
+ Y + ++ A+ LRM + +KP +Y L+ Y+ + + Y ++ + +
Sbjct: 456 ISAYGRTKKMSDMAADAFLRMKKVGLKPSS-HSYTALIHAYSVSGWHEKAYASFEEMCKE 514
Query: 307 SFSPVINTSYLVMLSTLRRLNDIEGITKCLEEWE 340
P + T Y +L RR D K +E W+
Sbjct: 515 GIKPSVET-YTSVLDAFRRSGD---TGKLMEIWK 544
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 78/150 (52%), Gaps = 3/150 (2%)
Query: 142 YGALLNCYCKELMADKALALFDKMDEFRFVTSL-AFNNLMSMYMRLGRP-EKVPQLVHDM 199
Y +L+ Y + +KA+ LF++M E +L +N ++ ++ ++GR K+ ++ +M
Sbjct: 213 YTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEM 272
Query: 200 RQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQ 259
R + + FT +++CA L EA+ + E++ G TY+ L ++ KA
Sbjct: 273 RSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSC-GYEPGTVTYNALLQVFGKAGV 331
Query: 260 FEKAEVMLRMMEEEIKPHEREAYHCLLSLY 289
+ +A +L+ MEE P + Y+ L++ Y
Sbjct: 332 YTEALSVLKEMEENSCPADSVTYNELVAAY 361
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 133/306 (43%), Gaps = 16/306 (5%)
Query: 82 RKYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDL-VCKTKGVV-AAESFFEGLLPCA--K 137
R +RK L+ EMR +D + L C +G++ A+ FF L C
Sbjct: 260 RSWRKILGVLD-----EMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEP 314
Query: 138 NKYTYGALLNCYCKELMADKALALFDKMDEFRF-VTSLAFNNLMSMYMRLGRPEKVPQLV 196
TY ALL + K + +AL++ +M+E S+ +N L++ Y+R G ++ ++
Sbjct: 315 GTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVI 374
Query: 197 HDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVK 256
M ++ + +A TY +++ + +EA +++ M+ G + + TY+ + ++ K
Sbjct: 375 EMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEA-GCVPNTCTYNAVLSLLGK 433
Query: 257 AEQFEKAEVMLRMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHLKS--FSPVINT 314
+ + ML M+ R ++ +L+L V RV+ +KS F P +T
Sbjct: 434 KSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDT 493
Query: 315 SYLVMLSTLRRLNDIEGITKCLEEWESQCVTYDIRMVSVAVNAYLRHDMDEEAESVLKRA 374
+ ++S R +K E + + +NA R E+V+ +
Sbjct: 494 -FNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVI--S 550
Query: 375 TMRCKG 380
M+ KG
Sbjct: 551 DMKSKG 556
>AT1G28000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9756674-9757947 REVERSE
LENGTH=388
Length = 388
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 119/250 (47%), Gaps = 5/250 (2%)
Query: 42 YRQLSALEKTGGSVSQILNQYVMQGKAIRKSVLENCIRELRKYRKFQHALEIMEWMEMRK 101
+ ++ AL + V+ L++++ +GK + +VL I L + ++F HAL++ EW+ R
Sbjct: 36 HSRIMALGREQKKVTPPLDEWLKRGKDLNPAVLRGLINSLCESQRFNHALQVSEWITKRG 95
Query: 102 V-NFSWDNYAVYLDLVCKTKGVVAAESFFEGLLPCAKNKYTYGALLNCYC-KELMADKAL 159
+ + S +++A L LV + G+ AE FF+ + ++ + LL+ Y + +A
Sbjct: 96 IFDLSTEDFASRLCLVEISTGLKEAEKFFKSIPENMRDDSVHTTLLSLYTISKKTRHEAE 155
Query: 160 ALFDKMD-EFRFVTSLAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISA-FTYHVWMNS 217
A + M + + + +++ +Y LG + +++ M++ + T + + +
Sbjct: 156 ATYQTMRVQNMLLKPYPYYSMIYLYALLGEKNMIDEILRQMKENGVEHDKNLTANNVLKA 215
Query: 218 CAASNDLNEAERIYGEMRRVDGNM-IDWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKP 276
A+ D+ E + + + W+T ++A Y+K KA MLR E +
Sbjct: 216 YASLPDVEAMEMFLMGLEVEEPRFSLAWQTGISIAKAYLKGGSSRKAVEMLRRTELVVDT 275
Query: 277 HEREAYHCLL 286
+++ + +L
Sbjct: 276 KSKDSANKVL 285
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 112/280 (40%), Gaps = 37/280 (13%)
Query: 78 IRELRKYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLVCKTKGVVAAESFFEGLLP--C 135
I K K + A E+ + M R + Y +D CK + A + ++ C
Sbjct: 340 IDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC 399
Query: 136 AKNKYTYGALLNCYCKELMADKALALFDKMDEFRFVT-SLAFNNLMSMYMRLGRPEKVPQ 194
N T+ L+N YCK D L LF KM V ++ +N L+ + LG+ +
Sbjct: 400 DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKE 459
Query: 195 LVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRR-----------------V 237
L +M R++P + TY + ++ + + +A I+ ++ +
Sbjct: 460 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMC 519
Query: 238 DGNMID--W---------------RTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKPHERE 280
+ + +D W +TY+ + K +AE++ R MEE+ +
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGW 579
Query: 281 AYHCLLSLYAGTRNRGEVYRVWDHLKSFSPVINTSYLVML 320
Y+ L+ + G + + ++ + LK ++ S + M+
Sbjct: 580 TYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMV 619
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Query: 142 YGALLNCYCKELMADKALALFDKMDEFRFVTS--LAFNNLMSMYMRLGRPEKVPQLVHDM 199
Y +++ CK D A LF++M E + +T+ + +N L+ + GR + +L+ DM
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEM-EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM 324
Query: 200 RQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQ 259
+R+I + T+ V ++S L EAE ++ EM G D TY++L + K
Sbjct: 325 IKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIH-RGIAPDTITYTSLIDGFCKENH 383
Query: 260 FEKAEVMLRMM 270
+KA M+ +M
Sbjct: 384 LDKANQMVDLM 394
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 8/205 (3%)
Query: 88 QHALEIMEWMEMRKVNFSWDNY--AVYLDLVCKTKGVVAAESFFEGL-LPCAKNKYTYGA 144
+ A+E+++ EM K F D Y LD +CK V A FE + + N + +
Sbjct: 200 KKAIEVLD--EMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTS 257
Query: 145 LLNCYCKELMADKALALFDKMDEFRFVTSLA-FNNLMSMYMRLGRPEKVPQLVHDMRQRR 203
LL +C+ +A + +M+E F + + NL+S Y G+ L+ DMR+R
Sbjct: 258 LLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRG 317
Query: 204 IPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKA 263
+A Y V + + + + EA +++ EM R + D TY+ L + + K + +K
Sbjct: 318 FEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECE-ADVVTYTALVSGFCKWGKIDKC 376
Query: 264 EVML-RMMEEEIKPHEREAYHCLLS 287
++L M+++ + P E H +++
Sbjct: 377 YIVLDDMIKKGLMPSELTYMHIMVA 401
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/295 (18%), Positives = 129/295 (43%), Gaps = 3/295 (1%)
Query: 135 CAKNKYTYGALLNCYCKELMADKALALFDKMDEFRFVTSL-AFNNLMSMYMRLGRPEKVP 193
C N TY AL+N + +E + +KA +F+++ E + +N LM Y R G P
Sbjct: 295 CKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAA 354
Query: 194 QLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAI 253
++ M+ +Y++ +++ + ++AE ++ EM+R+ G +++ L +
Sbjct: 355 EIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRL-GIAPTMKSHMLLLSA 413
Query: 254 YVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHLKSFSPVIN 313
Y KA K E +++ M E + + +L+LY ++ ++ +++ +
Sbjct: 414 YSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTAD 473
Query: 314 TS-YLVMLSTLRRLNDIEGITKCLEEWESQCVTYDIRMVSVAVNAYLRHDMDEEAESVLK 372
S Y ++++ + +E I + E + + D+ + + AY R + + V +
Sbjct: 474 ISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFE 533
Query: 373 RATMRCKGPFFKIREMFMMFYLKKDQLDGALSHLQAAHSEATIWRPSPEVVGAFL 427
P ++ + ++Q++ S L+ H T+ P+++ L
Sbjct: 534 EMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGVTVSSLVPKLMAKSL 588
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 137/323 (42%), Gaps = 15/323 (4%)
Query: 58 ILNQYVMQGKAIRKSVLENCIRELRKYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLVC 117
+++Q V G I L + K A+ +++ M R + Y V ++ +C
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 118 KTKGVVAAESFFEGLLPCAK---NKYTYGALLNCYCKELMADKALALFDKMDEFRFVTSL 174
K A + + AK + + +++ CK D AL LF +M+ ++
Sbjct: 237 KRGDTDLALNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 295
Query: 175 -AFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGE 233
+++L+S GR QL+ DM +++I + T++ +++ EAE++Y +
Sbjct: 296 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDD 355
Query: 234 M--RRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLLSLYAG 291
M R +D ++ TY++L + ++ +KA+ M M + + Y+ L+ +
Sbjct: 356 MIKRSIDPDIF---TYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412
Query: 292 TR---NRGEVYRVWDHLKSFSPVINTSYLVMLSTLRRLNDIEGITKCLEEWESQCVTYDI 348
++ + E++R H + +Y ++ L D + K ++ S V DI
Sbjct: 413 SKRVEDGTELFREMSHRGLVGDTV--TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 470
Query: 349 RMVSVAVNAYLRHDMDEEAESVL 371
S+ ++ + E+A V
Sbjct: 471 MTYSILLDGLCNNGKLEKALEVF 493
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 141/342 (41%), Gaps = 27/342 (7%)
Query: 54 SVSQILNQYVMQGKAIRKSV-----------------LENCIRELRKYRKFQHALEIMEW 96
++S +LN Y GK I ++V I L + K A+ +++
Sbjct: 152 TLSSLLNGYC-HGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDR 210
Query: 97 MEMRKVNFSWDNYAVYLDLVCKTKGVVAAESFFEGL--LPCAKNKYTYGALLNCYCKELM 154
M R Y ++ +CK + A S + + + Y +++ C
Sbjct: 211 MVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKN 270
Query: 155 ADKALALFDKMDEFRFVTSL-AFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHV 213
+ AL LF +MD ++ +N+L+ GR +L+ DM +R+I + T+
Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330
Query: 214 WMNSCAASNDLNEAERIYGEM--RRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMME 271
+++ L EAE++Y EM R +D D TYS+L + ++ ++A+ M +M
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDP---DIFTYSSLINGFCMHDRLDEAKHMFELMI 387
Query: 272 EEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHLKSFSPVINT-SYLVMLSTLRRLNDIE 330
+ Y+ L+ + + E ++ + V NT +Y ++ L + D +
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 447
Query: 331 GITKCLEEWESQCVTYDIRMVSVAVNAYLRHDMDEEAESVLK 372
K ++ S V DI S+ ++ ++ E+A V +
Sbjct: 448 MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE 489
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 9/190 (4%)
Query: 88 QHALEIMEWMEMRKVNFSWDNYAVYLDLVCKTKGVVAAESFFEGLL-PCAKNKY----TY 142
Q A+ +E M+ + + Y + L K + AE+ + LL C K +Y T
Sbjct: 627 QQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTS 686
Query: 143 GALLNCYCKELMADKALALFDKMDEFRFVTSLAFNNLMSMYMRLGRPEKVPQLVHDMRQR 202
++N Y + M KA A+FD M + F ++ MY + GR E+ Q+ MR+
Sbjct: 687 NCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREM 746
Query: 203 RIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEK 262
+I +Y+ + A EA + EM G D T+ +L I +K +K
Sbjct: 747 KILTDPLSYNSVLGLFALDGRFKEAVETFKEMVS-SGIQPDDSTFKSLGTILMKLGMSKK 805
Query: 263 AEVMLRMMEE 272
A +R +EE
Sbjct: 806 A---VRKIEE 812
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/295 (18%), Positives = 129/295 (43%), Gaps = 3/295 (1%)
Query: 135 CAKNKYTYGALLNCYCKELMADKALALFDKMDEFRFVTSL-AFNNLMSMYMRLGRPEKVP 193
C N TY AL+N + +E + +KA +F+++ E + +N LM Y R G P
Sbjct: 317 CKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAA 376
Query: 194 QLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAI 253
++ M+ +Y++ +++ + ++AE ++ EM+R+ G +++ L +
Sbjct: 377 EIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRL-GIAPTMKSHMLLLSA 435
Query: 254 YVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHLKSFSPVIN 313
Y KA K E +++ M E + + +L+LY ++ ++ +++ +
Sbjct: 436 YSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTAD 495
Query: 314 TS-YLVMLSTLRRLNDIEGITKCLEEWESQCVTYDIRMVSVAVNAYLRHDMDEEAESVLK 372
S Y ++++ + +E I + E + + D+ + + AY R + + V +
Sbjct: 496 ISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFE 555
Query: 373 RATMRCKGPFFKIREMFMMFYLKKDQLDGALSHLQAAHSEATIWRPSPEVVGAFL 427
P ++ + ++Q++ S L+ H T+ P+++ L
Sbjct: 556 EMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGVTVSSLVPKLMAKSL 610
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 101/214 (47%), Gaps = 8/214 (3%)
Query: 78 IRELRKYRKFQHALEIMEWMEMRKVNFSWDN--YAVYLDLVCKTKGVVAAESFFEGLLPC 135
I L K ++ + A ++ +EM + S DN Y++ +D + K + AA+ ++
Sbjct: 284 IDGLCKIKRLEDAKSLL--VEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSH 341
Query: 136 AKN--KYTYGALLNCYCKELMADKALALFDKMDEFRFV-TSLAFNNLMSMYMRLGRPEKV 192
N Y Y + KE + +KA ALFD M + + A+ +L+ Y R +
Sbjct: 342 GINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQG 401
Query: 193 PQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAA 252
+L+ +M++R I IS +TY + +S DL+ A I EM G + Y+ L
Sbjct: 402 YELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEM-IASGCRPNVVIYTTLIK 460
Query: 253 IYVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLL 286
+++ +F A +L+ M+E+ + Y+ L+
Sbjct: 461 TFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLI 494
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 79/162 (48%), Gaps = 10/162 (6%)
Query: 108 NYAVYLDLVCKTKGVVAAESFF-----EGLLPCAKNKYTYGALLNCYCKELMADKALALF 162
Y V ++ + K V AE F +G+ P + ++YG L+N + K KA ++F
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP---DVFSYGVLINGFSKLGNMQKASSIF 650
Query: 163 DKMDEFRFVTS-LAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAAS 221
D+M E + + +N L+ + R G EK +L+ +M + + +A TY ++ S
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKS 710
Query: 222 NDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKA 263
DL EA R++ EM ++ G + D Y+ L + E+A
Sbjct: 711 GDLAEAFRLFDEM-KLKGLVPDSFVYTTLVDGCCRLNDVERA 751
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 140/341 (41%), Gaps = 36/341 (10%)
Query: 56 SQILNQYVMQGKAI------RKSVLENCIRELRKYRKFQHAL----------EIMEWMEM 99
+ ++N+Y +GK I R V + + + + Y + L EI M
Sbjct: 561 TGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRG 620
Query: 100 RKVNFSWDNYAVYLDLVCKTKGVVAAESFF-----EGLLPCAKNKYTYGALLNCYCKELM 154
+ + +Y V ++ K + A S F EGL P N Y LL +C+
Sbjct: 621 KGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP---NVIIYNMLLGGFCRSGE 677
Query: 155 ADKALALFDKMD-EFRFVTSLAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHV 213
+KA L D+M + ++ + ++ Y + G + +L +M+ + + +F Y
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTT 737
Query: 214 WMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQFE-KAEVMLRMMEE 272
++ C ND+ A I+G ++ G ++ L K + E K EV+ R+M+
Sbjct: 738 LVDGCCRLNDVERAITIFGTNKK--GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDG 795
Query: 273 EI----KPHEREAYHCLLSLYAGTRNRGEVYRVWDHLK--SFSPVINTSYLVMLSTLRRL 326
KP++ Y+ ++ N ++ ++ + P + T Y +L+ ++
Sbjct: 796 SFDRFGKPNDV-TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVIT-YTSLLNGYDKM 853
Query: 327 NDIEGITKCLEEWESQCVTYDIRMVSVAVNAYLRHDMDEEA 367
+ +E + + D M SV +NA+L+ M +A
Sbjct: 854 GRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKA 894
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 116/270 (42%), Gaps = 15/270 (5%)
Query: 64 MQGKAIRKSVLE--NCIRELRKYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLVCKTKG 121
++ K IR +V+ + L ++ A ++ M +K+ + Y+ LD K
Sbjct: 216 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 275
Query: 122 VVAAESFFEGL--LPCAKNKYTYGALLNCYCKELMADKALALFDKM-DEFRFVTSLAFNN 178
V+ A+ FE + + + TY +L+N C D+A +FD M + +++N
Sbjct: 276 VLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNT 335
Query: 179 LMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVD 238
L++ + + R E +L +M QR + + TY+ + + D+++A+ + +M
Sbjct: 336 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFF- 394
Query: 239 GNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLLSLYAGTRNRGEV 298
G D TY+ L + EKA V+ M++ + Y ++ G G+V
Sbjct: 395 GISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYT---TVIRGMCKTGKV 451
Query: 299 YRVWD-----HLKSFSPVINTSYLVMLSTL 323
W LK P I T Y M+S L
Sbjct: 452 EEAWSLFCSLSLKGLKPDIVT-YTTMMSGL 480
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 89/200 (44%), Gaps = 9/200 (4%)
Query: 83 KYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLVCKTKGVVAAESFFEGLLPCA--KNKY 140
K +K+ + + + ME+ + + + ++ C V A S +L ++
Sbjct: 97 KLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRV 156
Query: 141 TYGALLNCYCKELMADKALALFDKMDEFRFVTSL-AFNNLMSMYMRLGRPEKVPQLVHDM 199
T G+L+N +C+ A++L DKM E + + A+N ++ + R ++
Sbjct: 157 TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI 216
Query: 200 RQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEM--RRVDGNMIDWRTYSNLAAIYVK- 256
++ I + TY +N S+ ++A R+ +M +++ N+I TYS L +VK
Sbjct: 217 ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVI---TYSALLDAFVKN 273
Query: 257 AEQFEKAEVMLRMMEEEIKP 276
+ E E+ M+ I P
Sbjct: 274 GKVLEAKELFEEMVRMSIDP 293
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 137/328 (41%), Gaps = 12/328 (3%)
Query: 58 ILNQYVMQGKAIRKSVLENCIRELRKYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLVC 117
+++Q V G I L + K A+ +++ M R Y ++ +C
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 118 KTKGVVAAESFFEGL--LPCAKNKYTYGALLNCYCKELMADKALALFDKMDEFRFVTSL- 174
K + A S + + + Y +++ CK D AL LF +MD +
Sbjct: 235 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF 294
Query: 175 AFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEM 234
+++L+S GR +L+ DM +R+I + T+ +++ L EAE++Y EM
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 354
Query: 235 --RRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLLSLYAGT 292
R +D ++ TYS+L + ++ ++A+ M +M + Y L+ +
Sbjct: 355 IKRSIDPDIF---TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA 411
Query: 293 RNRGEVYRVWDHLKSFSPVINT-SYLVMLSTLRRLNDIEGITKCLEEWESQCVTYDIRMV 351
+ E ++ + V NT +Y ++ + D + ++ S V +I
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 471
Query: 352 SVAVNAYLRHDMDEEAESV---LKRATM 376
++ ++ ++ +A V L+R+TM
Sbjct: 472 NILLDGLCKNGKLAKAMVVFEYLQRSTM 499
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 113/266 (42%), Gaps = 39/266 (14%)
Query: 130 EGLLPCAKNKYTYGALLNCYCKELMADKALALFDKMDEFRFV-TSLAFNNLMSMYMRLGR 188
+G LP +N +L M +KA A+++ M E + T + FN ++ + G
Sbjct: 197 KGFLPSVRN---CNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGD 253
Query: 189 PEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYS 248
E+V ++ +M++R I S TY++ +N + + + EA R +G+MRR G + +++
Sbjct: 254 LERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRR-SGFAVTPYSFN 312
Query: 249 NLAAIYVKAEQFEKA-EVMLRMMEEEIKP-------------------HERE-------- 280
L Y K F+ A V M+ I P RE
Sbjct: 313 PLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAP 372
Query: 281 ---AYHCLLSLYAGTRNRGEVYRVWDHLKS--FSPVINTSYLVMLSTLRRLNDIEGITKC 335
+Y+ L+ Y E ++D L++ P I T Y ++ L ++EG +
Sbjct: 373 DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVT-YNTLIDGLCESGNLEGAQRL 431
Query: 336 LEEWESQCVTYDIRMVSVAVNAYLRH 361
EE +Q + D+ + V ++++
Sbjct: 432 KEEMTTQLIFPDVITYTTLVKGFVKN 457
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 5/196 (2%)
Query: 81 LRKYRKFQHALEIMEWM-EMRKVNFSWDNYAVYLDLVCKTKGVVAAESFFEGLL--PCAK 137
L + +Q +L +++W+ E K S Y V L V + K A F+ + A
Sbjct: 129 LSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAP 188
Query: 138 NKYTYGALLNCYCKELMADKALALFDKMDEFRFVTSLA-FNNLMSMYMRLGRPEKVPQLV 196
++YTY L+ + KE M D AL+ KM++ R L ++NL+ + RL K +
Sbjct: 189 DRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIF 248
Query: 197 HDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVK 256
+++ I Y+ +N + EA + EM G + + +YS L ++YV+
Sbjct: 249 SRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEA-GVLPNTVSYSTLLSVYVE 307
Query: 257 AEQFEKAEVMLRMMEE 272
+F +A + M+E
Sbjct: 308 NHKFLEALSVFAEMKE 323
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 88/191 (46%), Gaps = 3/191 (1%)
Query: 142 YGALLNCYCKELMADKALALFDKM-DEFRFVTSLAFNNLMSMYMRLGRPEKVPQLVHDMR 200
Y A+++ CK+ A LF +M D+ F + ++ ++ + R GR QL+ DM
Sbjct: 79 YNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMI 138
Query: 201 QRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQF 260
+R+I T+ +N+ ++EAE IYG+M R G TY+++ + K ++
Sbjct: 139 ERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLR-RGIFPTTITYNSMIDGFCKQDRL 197
Query: 261 EKAEVMLRMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHLKSFSPVINT-SYLVM 319
A+ ML M + + + L++ Y + ++ + V NT +Y +
Sbjct: 198 NDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTL 257
Query: 320 LSTLRRLNDIE 330
+ ++ D++
Sbjct: 258 IHGFCQVGDLD 268
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 118/292 (40%), Gaps = 19/292 (6%)
Query: 140 YTYGALLNCYCKELMADKALALFDKMDEFRFVTSL-AFNNLMSMYMRLGRPEKVPQLVHD 198
+ Y L++ CK + A LFD+M R + SL +N L+ Y + G PEK ++
Sbjct: 215 FIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRER 274
Query: 199 MRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAE 258
M+ I S T++ + + + +AE + EM+ + G + D T+S L Y
Sbjct: 275 MKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDL-GFVPDAFTFSILFDGY---S 330
Query: 259 QFEKAEVMLRMMEEEIKPHER-EAYHCLLSLYA----GTRNRGEVYRVWDHLKSFSP--V 311
EKAE L + E + + AY C + L A G + E + K P V
Sbjct: 331 SNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEV 390
Query: 312 INTSYLVMLSTLRRLNDIEGITKCLEEWESQCVTYDIRMVSVAVNAYLRHDMDEEAESVL 371
I Y M+ R D+ G +E E Q + D + + + E AE +
Sbjct: 391 I---YNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEV 447
Query: 372 KRATMRCKGPFFKIREMFMMFYLKKDQLDGALSHLQAAHSEATIWRPSPEVV 423
+ ++ P + + + Y +K + D L+ T+ P VV
Sbjct: 448 NKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTM----PNVV 495
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 96/219 (43%), Gaps = 14/219 (6%)
Query: 64 MQGKAIRKSVLENCIRELRKYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLVCKTKGVV 123
M GKAI+ +V K LE+ M+ ++ S Y V +D +CK K +
Sbjct: 181 MYGKAIQAAV---------KLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMN 231
Query: 124 AAESFFEGLLP--CAKNKYTYGALLNCYCKELMADKALALFDKMDEFRFVTSL-AFNNLM 180
AE F+ +L + TY L++ YCK +K+ + ++M SL FN L+
Sbjct: 232 DAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLL 291
Query: 181 SMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGN 240
+ G E ++ +M+ AFT+ + + +++ A +Y E G
Sbjct: 292 KGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVY-ETAVDSGV 350
Query: 241 MIDWRTYSNLAAIYVKAEQFEKAEVML-RMMEEEIKPHE 278
++ T S L K + EKAE +L R M + + P+E
Sbjct: 351 KMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNE 389
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 120/272 (44%), Gaps = 11/272 (4%)
Query: 62 YVMQGKAIRKSVL--ENCIRELRKYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLVCKT 119
Y M+ K IR + I L ++ A ++ M RK++ + + +D K
Sbjct: 208 YCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKE 267
Query: 120 KGVVAAESFFEGLL--PCAKNKYTYGALLNCYCKELMADKALALFDKM-DEFRFVTSLAF 176
++ A + ++ ++ N +TY +L+N +C A +FD M + F + +
Sbjct: 268 GNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTY 327
Query: 177 NNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRR 236
N L++ + + R E +L +M + + AFTY+ ++ + LN A++++ M
Sbjct: 328 NTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRM-- 385
Query: 237 VD-GNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLLSLYAGTRNR 295
VD G D TY+ L + EKA VM+ +++ + Y+ ++ T
Sbjct: 386 VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKL 445
Query: 296 GEVYRVWDHL--KSFSPVINTSYLVMLSTLRR 325
E + ++ L K P +Y+ M+S L R
Sbjct: 446 KEAWCLFRSLTRKGVKPDA-IAYITMISGLCR 476
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 122/269 (45%), Gaps = 9/269 (3%)
Query: 138 NKYTYGALLNCYCKELMADKALALFDKMDEFRFVTSL-AFNNLMSMYMRLGRPEKVPQLV 196
N T+ ++ Y + D+A+ F+ M+++ +L AFN L+S + K ++
Sbjct: 167 NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVF 226
Query: 197 HDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVD-GNMIDWRTYSNLAAIYV 255
+MR R P S TY + + +L +A ++ EM +D G D TYS + I
Sbjct: 227 ENMRDRFTPDSK-TYSILLEGWGKEPNLPKAREVFREM--IDAGCHPDIVTYSIMVDILC 283
Query: 256 KAEQFEKAEVMLRMMEEEIKPHEREAYHCLLSLYAGTRNRGE--VYRVWDHLKSFSPVIN 313
KA + ++A ++R M+ I Y L+ Y GT NR E V + +S
Sbjct: 284 KAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTY-GTENRLEEAVDTFLEMERSGMKADV 342
Query: 314 TSYLVMLSTLRRLNDIEGITKCLEEWESQCVTYDIRMVSVAVNAYLRHDMDEEAESVLKR 373
+ ++ + N ++ + + L+E +S+ VT + + ++ + + +EA V ++
Sbjct: 343 AVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRK 402
Query: 374 ATMRCKGPFFKIREMFMMFYLKKDQLDGA 402
C+ P M + + +K +++ A
Sbjct: 403 MIKVCE-PDADTYTMVIKMFCEKKEMETA 430
>AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:20791259-20792314 FORWARD
LENGTH=351
Length = 351
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 3/138 (2%)
Query: 139 KYTYGALLNCYCKELMADKALALFDKMDEFRF-VTSLAFNNLMSMYMRLGRPEKVPQLVH 197
K++Y L+ CK D AL L + M F +++ F+ +++ + R E+ ++V
Sbjct: 125 KHSYETLIARLCKLGRIDDALVLINDMAIGEFGLSTCVFHPILNTLTKKNRIEEAWRVVE 184
Query: 198 DMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMI--DWRTYSNLAAIYV 255
MR IP+ +Y+ ++ S D+ EA R+ +M + ++ D RTY L
Sbjct: 185 LMRSHAIPVDVTSYNYFLTSHCYDGDVAEASRVLRKMEEEEEGVMSPDTRTYDALVLGAC 244
Query: 256 KAEQFEKAEVMLRMMEEE 273
K+ + E A +LR MEEE
Sbjct: 245 KSGRVEAAMAILRRMEEE 262
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 80/389 (20%), Positives = 155/389 (39%), Gaps = 18/389 (4%)
Query: 78 IRELRKYRKFQHALEIMEWMEMRK------VNFSWDNYAVYLDLVCKTKGVVAAESFFEG 131
I L K R+ ALE+ E M ++ + ++ +D +CK + AE
Sbjct: 336 INTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVR 395
Query: 132 LL---PCAKNKYTYGALLNCYCKELMADKALALFDKMDEFRFVTS-LAFNNLMSMYMRLG 187
+ CA N TY L++ YC+ + A + +M E + + N ++ R
Sbjct: 396 MKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHH 455
Query: 188 RPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTY 247
DM + + + TY +++C + +++ +A Y +M G D + Y
Sbjct: 456 GLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA-GCSPDAKIY 514
Query: 248 SNLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVW-DHLK 306
L + + + A ++ ++E + AY+ L+ L+ N +VY + D K
Sbjct: 515 YALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEK 574
Query: 307 SFSPVINTSYLVMLSTLRRLNDIEGITKCLEEWESQCVTYDIRMVSVAVNAYLRHDMDEE 366
+ +Y ++S + D E + + +E+ + + ++AY +E
Sbjct: 575 EGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDE 634
Query: 367 AESVLKRATMRCK-GPFFKIREMFMMFYLKKDQLDGALSHLQAAHSEATIWRPSPEVVGA 425
A + K + K P I + + + K ALS + + + RP+ E A
Sbjct: 635 ALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKE--EMKMKMVRPNVETYNA 692
Query: 426 FLKYYDEKTDLDGVDELCKILDTNDDDSC 454
K +EKT + L K++D + SC
Sbjct: 693 LFKCLNEKTQ---GETLLKLMDEMVEQSC 718
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 117/271 (43%), Gaps = 15/271 (5%)
Query: 91 LEIMEWMEMRKVNFSWDNYAVYLDLV---CKTKGVVAAESFFEGLLP--CAKNKYTYGAL 145
+ ++ +M+M K N Y+ L+ C V A ++E +L C+ + Y AL
Sbjct: 459 MAVVFFMDMEKEGVK-GNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYAL 517
Query: 146 LNCYCKELMADKALALFDKMDEFRF-VTSLAFNNLMSMYMRLGRPEKVPQLVHDMRQRRI 204
++ C+ A+ + +K+ E F + LA+N L+ ++ EKV +++ DM +
Sbjct: 518 ISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGK 577
Query: 205 PISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKAE 264
+ TY+ ++ D ER+ +MR DG TY + Y + ++A
Sbjct: 578 KPDSITYNTLISFFGKHKDFESVERMMEQMRE-DGLDPTVTTYGAVIDAYCSVGELDEAL 636
Query: 265 VMLRMM--EEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDH--LKSFSPVINTSYLVML 320
+ + M ++ P+ Y+ L++ ++ N G+ + + +K P + T Y +
Sbjct: 637 KLFKDMGLHSKVNPNTV-IYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVET-YNALF 694
Query: 321 STLRRLNDIEGITKCLEEW-ESQCVTYDIRM 350
L E + K ++E E C I M
Sbjct: 695 KCLNEKTQGETLLKLMDEMVEQSCEPNQITM 725
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 91/190 (47%), Gaps = 14/190 (7%)
Query: 87 FQHALEIMEWMEMRKVNFSWDNYAVYLDLVCKTKGV-----VAAESFFEGLLPCAKNKYT 141
++ A + + M R++ +Y LD +CK + + A+ + ++P N +
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMP---NVVS 411
Query: 142 YGALLNCYCKELMADKALALFDKMDEFRF-VTSLAFNNLMSMYMRLGRPEKVPQLVHDMR 200
Y +++ + K D+AL LF +M + +++N L+S+Y ++GR E+ ++ +M
Sbjct: 412 YSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMA 471
Query: 201 QRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRR--VDGNMIDWRTYSNLAAIYVKAE 258
I TY+ + +E ++++ EM+R V N++ TYS L Y K
Sbjct: 472 SVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLL---TYSTLIDGYSKGG 528
Query: 259 QFEKAEVMLR 268
+++A + R
Sbjct: 529 LYKEAMEIFR 538
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 109/247 (44%), Gaps = 11/247 (4%)
Query: 131 GLLPCAKNKYTYGALLNCYCKELMADKALA-LFDKMDEFRFVTS-LAFNNLMSMYMRLGR 188
GL P N TY A+++ K M K +A FD+M + FN+L+++ R G
Sbjct: 298 GLRP---NLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGL 354
Query: 189 PEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEM--RRVDGNMIDWRT 246
E L +M RRI F+Y+ +++ ++ A I +M +R+ N++ +
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVV---S 411
Query: 247 YSNLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHLK 306
YS + + KA +F++A + M +R +Y+ LLS+Y E + +
Sbjct: 412 YSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMA 471
Query: 307 SFSPVIN-TSYLVMLSTLRRLNDIEGITKCLEEWESQCVTYDIRMVSVAVNAYLRHDMDE 365
S + +Y +L + + + K E + + V ++ S ++ Y + + +
Sbjct: 472 SVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYK 531
Query: 366 EAESVLK 372
EA + +
Sbjct: 532 EAMEIFR 538
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/329 (19%), Positives = 135/329 (41%), Gaps = 12/329 (3%)
Query: 57 QILNQYVMQGKAIRKSVLENCIRELRKYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLV 116
++ Q V G I L ++ + A+ +++ M ++ Y + ++ +
Sbjct: 172 SLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGL 231
Query: 117 CKTKGVVAAESFFEGL--LPCAKNKYTYGALLNCYCKELMADKALALFDKMDEFRFVTSL 174
CK + A S + + Y +++ C + AL LF +MD ++
Sbjct: 232 CKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 291
Query: 175 -AFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGE 233
+N+L+ GR +L+ DM +R+I + T+ +++ L EAE++Y E
Sbjct: 292 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 234 M--RRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLLSLYAG 291
M R +D D TYS+L + ++ ++A+ M +M + Y+ L+ +
Sbjct: 352 MIKRSIDP---DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 408
Query: 292 TRNRGEVYRVWDHLKSFSPVINT-SYLVMLSTLRRLNDIEGITKCLEEWESQCVTYDIRM 350
+ E ++ + V NT +Y ++ + + + ++ S V DI
Sbjct: 409 AKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMT 468
Query: 351 VSVAVNAYLRHDMDEEAESV---LKRATM 376
S+ ++ + E A V L+R+ M
Sbjct: 469 YSILLDGLCNNGKVETALVVFEYLQRSKM 497
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 145/359 (40%), Gaps = 47/359 (13%)
Query: 75 ENCIRELRKYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLVCKTKGVVA-AESFFEGLL 133
E+ I+EL + +FQ + ++ N +Y C KG V A +F +L
Sbjct: 194 EDLIKELCGFHEFQKSYQVF-------------NTVIY---ACTKKGNVKLASKWFHMML 237
Query: 134 PCA--KNKYTYGALLNCYCKELMADKALALFDKMDEFRFVTSLAFNNLMSMYMRLGRPEK 191
N T G L+ Y K ++A F M +F V A+++++++Y RL +K
Sbjct: 238 EFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESAYSSMITIYTRLRLYDK 297
Query: 192 VPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLA 251
+++ M+Q R+ + + V +N+ + + AE I M G + Y+ L
Sbjct: 298 AEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAA-GFSPNIIAYNTLI 356
Query: 252 AIYVKAEQFEKAEVML-RMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHLKSFSP 310
Y K + E A+ + R+ ++P E +Y ++ + N E + LK
Sbjct: 357 TGYGKIFKMEAAQGLFHRLCNIGLEPDE-TSYRSMIEGWGRADNYEEAKHYYQELKRCGY 415
Query: 311 VINTSYLVMLSTLR-RLNDIEGITKCLEEWESQCVTYDIRMVSVAVNAYLRHDMDEEAES 369
N+ L L L+ + D +G K +E+ Y ++ + + AY E
Sbjct: 416 KPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYS-SILGIILQAY---------EK 465
Query: 370 VLKRATMRC--KGPFFK-IR------EMFMMFYLKKDQLDGALSHLQAAHSEATIWRPS 419
V K + C KG F IR +M Y+K +D L L+ WR S
Sbjct: 466 VGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKK-----WRDS 519
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/321 (18%), Positives = 139/321 (43%), Gaps = 9/321 (2%)
Query: 58 ILNQYVMQGKAIRKSVLENCIRELRKYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLVC 117
+++Q V G + L ++ K A+ ++E M ++ Y ++ +C
Sbjct: 157 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 216
Query: 118 KTKGVVAAESFFEGL--LPCAKNKYTYGALLNCYCKELMADKALALFDKMDEFRFVTSL- 174
K A + + + Y +++ CK D AL LF +MD +
Sbjct: 217 KRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVF 276
Query: 175 AFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEM 234
+++L+S GR +L+ DM +R+I + T++ +++ A L EAE+++ EM
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
Query: 235 --RRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLLSLYAGT 292
R +D N++ TY++L + ++ ++A+ + +M + + Y+ L++ +
Sbjct: 337 IQRSIDPNIV---TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393
Query: 293 RNRGEVYRVWDHLKSFSPVINT-SYLVMLSTLRRLNDIEGITKCLEEWESQCVTYDIRMV 351
+ + ++ + V NT +Y ++ + +D + ++ S V +I
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453
Query: 352 SVAVNAYLRHDMDEEAESVLK 372
+ ++ ++ E+A V +
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFE 474
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 123/305 (40%), Gaps = 7/305 (2%)
Query: 78 IRELRKYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLVCKTKGVVAAESFFEGLLP--C 135
+ L K +HA+EIM+ M + Y + +CK V A + ++ C
Sbjct: 302 VNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDC 361
Query: 136 AKNKYTYGALLNCYCKELMADKALALFDKMDEFRFVTSLAFNNLMSMYMRLGRPEKVP-Q 194
+ N TY L++ CKE ++A L + + + N + + L R +V +
Sbjct: 362 SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAME 421
Query: 195 LVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIY 254
L +MR + FTY++ ++S + L+EA + +M + G TY+ L +
Sbjct: 422 LFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM-ELSGCARSVITYNTLIDGF 480
Query: 255 VKAEQFEKAEVMLRMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDH--LKSFSPVI 312
KA + +AE + ME Y+ L+ +R + ++ D ++ P
Sbjct: 481 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK 540
Query: 313 NTSYLVMLSTLRRLNDIEGITKCLEEWESQCVTYDIRMVSVAVNAYLRHDMDEEAESVLK 372
T Y +L+ R DI+ ++ S DI ++ + E A +L+
Sbjct: 541 YT-YNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLR 599
Query: 373 RATMR 377
M+
Sbjct: 600 SIQMK 604
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 11/224 (4%)
Query: 63 VMQGKAIRKSV--LENCIRELRKYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLVCKTK 120
V+ K I V + I+ L R + A+E+ E M + Y + +D +C
Sbjct: 390 VLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKG 449
Query: 121 GVVAAESFFEG--LLPCAKNKYTYGALLNCYCKELMADKALALFDKMDEFRFVT--SLAF 176
+ A + + L CA++ TY L++ +CK +A +FD+M E V+ S+ +
Sbjct: 450 KLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM-EVHGVSRNSVTY 508
Query: 177 NNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRR 236
N L+ + R E QL+ M +TY+ + D+ +A I M
Sbjct: 509 NTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS 568
Query: 237 VDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEEE---IKPH 277
+G D TY L + KA + E A +LR ++ + + PH
Sbjct: 569 -NGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPH 611
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 96/242 (39%), Gaps = 12/242 (4%)
Query: 86 KFQHALEIMEWMEMRKVNFSWDNYAVYLDLVCKTKGVVAAESFFEGL--LPCAKNKYTYG 143
K AL +++ ME+ S Y +D CK AE F+ + ++N TY
Sbjct: 450 KLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYN 509
Query: 144 ALLNCYCKELMADKALALFDKMD-EFRFVTSLAFNNLMSMYMRLGRPEKVPQLVHDMRQR 202
L++ CK + A L D+M E + +N+L++ + R G +K +V M
Sbjct: 510 TLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSN 569
Query: 203 RIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEK 262
TY ++ + + A ++ ++ N+ + ++ K + E
Sbjct: 570 GCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEA 629
Query: 263 AEVMLRMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYR-VWDHL-----KSFSPVINTSY 316
+ M+E+ P + +Y ++ G N G R D L K F P ++ Y
Sbjct: 630 INLFREMLEQNEAPPDAVSYRI---VFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLY 686
Query: 317 LV 318
++
Sbjct: 687 ML 688
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 129/302 (42%), Gaps = 31/302 (10%)
Query: 33 ERPAEKPNLYR---------QLSALEKTGGSVSQILNQYVMQGKAIRKSVLEN-CIR-EL 81
+R KPN Y ++ L + + S+++ Q ++ + ++++ C R ++
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 82 RKYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLVCKTKGVVAA-----ESFFEGLLPCA 136
R KF + M R + Y + C+ +V A E F +GL P
Sbjct: 368 RAASKFFYE------MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP-- 419
Query: 137 KNKYTYGALLNCYCKELMADKALALFDKMDEFRFVTSL-AFNNLMSMYMRLGRPEKVPQL 195
+ T+ L+N YCK A + + M + ++ + L+ + G + +L
Sbjct: 420 -DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 478
Query: 196 VHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYV 255
+H+M + + + FTY+ +N S ++ EA ++ GE N D TY+ L Y
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA-DTVTYTTLMDAYC 537
Query: 256 KAEQFEKA-EVMLRMMEEEIKPHEREAYHCLLSLYA--GTRNRGEVYRVWDHLKSFSPVI 312
K+ + +KA E++ M+ + ++P ++ L++ + G GE W K +P
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQP-TIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596
Query: 313 NT 314
T
Sbjct: 597 TT 598
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 129/302 (42%), Gaps = 31/302 (10%)
Query: 33 ERPAEKPNLYR---------QLSALEKTGGSVSQILNQYVMQGKAIRKSVLEN-CIR-EL 81
+R KPN Y ++ L + + S+++ Q ++ + ++++ C R ++
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 82 RKYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLVCKTKGVVAA-----ESFFEGLLPCA 136
R KF + M R + Y + C+ +V A E F +GL P
Sbjct: 368 RAASKFFYE------MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP-- 419
Query: 137 KNKYTYGALLNCYCKELMADKALALFDKMDEFRFVTSL-AFNNLMSMYMRLGRPEKVPQL 195
+ T+ L+N YCK A + + M + ++ + L+ + G + +L
Sbjct: 420 -DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 478
Query: 196 VHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYV 255
+H+M + + + FTY+ +N S ++ EA ++ GE N D TY+ L Y
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA-DTVTYTTLMDAYC 537
Query: 256 KAEQFEKA-EVMLRMMEEEIKPHEREAYHCLLSLYA--GTRNRGEVYRVWDHLKSFSPVI 312
K+ + +KA E++ M+ + ++P ++ L++ + G GE W K +P
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQP-TIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596
Query: 313 NT 314
T
Sbjct: 597 TT 598
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 102/238 (42%), Gaps = 16/238 (6%)
Query: 49 EKTGGSVSQILNQYVMQGKAIRKSVLENCIRELRKYRKFQHALEIMEWMEMRKVNFSWDN 108
EK + +++++ + G +R +VL +R K + A ++ +EM ++ F D
Sbjct: 262 EKAVALILELIDRKYLAGDDLR-AVLGMVVRGFCNEMKMKAAESVI--IEMEEIGFGLDV 318
Query: 109 YA--VYLDLVCKTKGVVAAESFFEGLLP--CAKNKYTYGALLNCYCKELMADKALALFDK 164
YA +D CK + A F + +L N +L CYCK D L +K
Sbjct: 319 YACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCK---MDMCLEALEK 375
Query: 165 MDEFR----FVTSLAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAA 220
EFR F+ + +N +LGR E+ +L+ +M+ R I Y ++
Sbjct: 376 FKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCL 435
Query: 221 SNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVK-AEQFEKAEVMLRMMEEEIKPH 277
+ +A + EM +G D TY+ L + + + E E+ RM E KP+
Sbjct: 436 QGKVVDALDLIDEMIG-NGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPN 492
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/389 (20%), Positives = 154/389 (39%), Gaps = 18/389 (4%)
Query: 78 IRELRKYRKFQHALEIMEWMEMRK------VNFSWDNYAVYLDLVCKTKGVVAAESFFEG 131
I L K R+ ALE+ E M ++ + ++ +D +CK + AE
Sbjct: 336 INTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVR 395
Query: 132 LL---PCAKNKYTYGALLNCYCKELMADKALALFDKMDEFRFVTS-LAFNNLMSMYMRLG 187
+ C N TY L++ YC+ + A + +M E + + N ++ R
Sbjct: 396 MKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHH 455
Query: 188 RPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTY 247
DM + + + TY +++C + +++ +A Y +M G D + Y
Sbjct: 456 GLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA-GCSPDAKIY 514
Query: 248 SNLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVW-DHLK 306
L + + + A ++ ++E + AY+ L+ L+ N +VY + D K
Sbjct: 515 YALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEK 574
Query: 307 SFSPVINTSYLVMLSTLRRLNDIEGITKCLEEWESQCVTYDIRMVSVAVNAYLRHDMDEE 366
+ +Y ++S + D E + + +E+ + + ++AY +E
Sbjct: 575 EGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDE 634
Query: 367 AESVLKRATMRCK-GPFFKIREMFMMFYLKKDQLDGALSHLQAAHSEATIWRPSPEVVGA 425
A + K + K P I + + + K ALS + + + RP+ E A
Sbjct: 635 ALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKE--EMKMKMVRPNVETYNA 692
Query: 426 FLKYYDEKTDLDGVDELCKILDTNDDDSC 454
K +EKT + L K++D + SC
Sbjct: 693 LFKCLNEKTQ---GETLLKLMDEMVEQSC 718
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 117/271 (43%), Gaps = 15/271 (5%)
Query: 91 LEIMEWMEMRKVNFSWDNYAVYLDLV---CKTKGVVAAESFFEGLLP--CAKNKYTYGAL 145
+ ++ +M+M K N Y+ L+ C V A ++E +L C+ + Y AL
Sbjct: 459 MAVVFFMDMEKEGVK-GNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYAL 517
Query: 146 LNCYCKELMADKALALFDKMDEFRF-VTSLAFNNLMSMYMRLGRPEKVPQLVHDMRQRRI 204
++ C+ A+ + +K+ E F + LA+N L+ ++ EKV +++ DM +
Sbjct: 518 ISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGK 577
Query: 205 PISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKAE 264
+ TY+ ++ D ER+ +MR DG TY + Y + ++A
Sbjct: 578 KPDSITYNTLISFFGKHKDFESVERMMEQMRE-DGLDPTVTTYGAVIDAYCSVGELDEAL 636
Query: 265 VMLRMM--EEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDH--LKSFSPVINTSYLVML 320
+ + M ++ P+ Y+ L++ ++ N G+ + + +K P + T Y +
Sbjct: 637 KLFKDMGLHSKVNPNTV-IYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVET-YNALF 694
Query: 321 STLRRLNDIEGITKCLEEW-ESQCVTYDIRM 350
L E + K ++E E C I M
Sbjct: 695 KCLNEKTQGETLLKLMDEMVEQSCEPNQITM 725
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 117/256 (45%), Gaps = 9/256 (3%)
Query: 58 ILNQYVMQGKAIRKSVLENC-IRELRKYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLV 116
+LN + K R+ +L N ++ RK + + + ++ + EM + DN +
Sbjct: 161 VLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFD--EMLERGIKPDNATFTTIIS 218
Query: 117 CKTKGVVA--AESFFEGL--LPCAKNKYTYGALLNCYCKELMADKALALFDKMDEFRF-V 171
C + V A +FE + C + T A+++ Y + D AL+L+D+ ++ +
Sbjct: 219 CARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRI 278
Query: 172 TSLAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIY 231
++ F+ L+ +Y G + + +M+ + + Y+ ++S + +A+ IY
Sbjct: 279 DAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIY 338
Query: 232 GEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLLSLYAG 291
++ +G +W TY+ L Y +A + A + R M+E+ Y+ LLS+ A
Sbjct: 339 KDLI-TNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCAD 397
Query: 292 TRNRGEVYRVWDHLKS 307
R E + ++ +K+
Sbjct: 398 NRYVDEAFEIFQDMKN 413
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 90/203 (44%), Gaps = 10/203 (4%)
Query: 90 ALEIMEWMEMRKVNFSWDNYAVYLDLVCKTKGVVAAESFFE-----GLLPCAKNKYTYGA 144
A ++ ME K+ + +D +CK + V A + F+ G+ P N TY +
Sbjct: 169 AFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP---NVVTYSS 225
Query: 145 LLNCYCKELMADKALALFDKMDEFRFVTSL-AFNNLMSMYMRLGRPEKVPQLVHDMRQRR 203
L++C C A L M E + +L FN L+ +++ G+ + +L DM +R
Sbjct: 226 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 285
Query: 204 IPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKA 263
I FTY+ +N + L++A++++ M D D TY+ L + K+++ E
Sbjct: 286 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC-FPDLDTYNTLIKGFCKSKRVEDG 344
Query: 264 EVMLRMMEEEIKPHEREAYHCLL 286
+ R M + Y L+
Sbjct: 345 TELFREMSHRGLVGDTVTYTTLI 367
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 139/328 (42%), Gaps = 12/328 (3%)
Query: 58 ILNQYVMQGKAIRKSVLENCIRELRKYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLVC 117
+++Q V G I L + K A+ +++ M R + Y V ++ +C
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 118 KTKGVVAAESFFEGL--LPCAKNKYTYGALLNCYCKELMADKALALFDKMDEFRFVTS-L 174
K + A + + N Y +++ CK D AL LF +M+ + +
Sbjct: 237 KRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 296
Query: 175 AFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEM 234
+++L+S R +L+ DM +R+I + T++ +++ L EAE++Y EM
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356
Query: 235 --RRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLLSLYAGT 292
R +D D TYS+L + ++ ++A+ M +M + Y+ L++ +
Sbjct: 357 IKRSIDP---DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKA 413
Query: 293 RNRGEVYRVWDHLKSFSPVINT-SYLVMLSTLRRLNDIEGITKCLEEWESQCVTYDIRMV 351
+ E ++ + V NT +Y ++ + D + ++ S V +I
Sbjct: 414 KRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTY 473
Query: 352 SVAVNAYLRHDMDEEAESV---LKRATM 376
+ ++ ++ E+A V L+R+ M
Sbjct: 474 NTLLDGLCKNGKLEKAMVVFEYLQRSKM 501
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 100/223 (44%), Gaps = 9/223 (4%)
Query: 109 YAVYLDLVCKTKGVVAAESFFEGLLPCAKN--KYTYGALLNCYCKELMADKALALFDKMD 166
Y +D VCK + AAE + N + + L++ YC++ M D+A ++D M+
Sbjct: 367 YGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVME 426
Query: 167 EFRFVTSL-AFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLN 225
+ F + N + S + RL R ++ Q + M + + +S +Y ++ ++
Sbjct: 427 QKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVE 486
Query: 226 EAERIYGEM--RRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAYH 283
EA+R++ EM + V N I TY+ + Y K + ++A + ME + Y
Sbjct: 487 EAKRLFVEMSSKGVQPNAI---TYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYT 543
Query: 284 CLLSLYAGTRNRGEVYRVWDHLKSFSPVINT-SYLVMLSTLRR 325
L+ N E R++ + N+ +Y VM+S L +
Sbjct: 544 SLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSK 586
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/255 (19%), Positives = 116/255 (45%), Gaps = 6/255 (2%)
Query: 57 QILNQYVMQGKAIRKSVLENCIRELRKYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLV 116
+++ ++ ++G I K R F +++ M+ V ++ Y + ++L
Sbjct: 245 KLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELS 304
Query: 117 CKTKGVVAAESFFEGLL--PCAKNKYTYGALLNCYCKELMADKALALFDKMDEFRFV-TS 173
K + AE F+ + + + Y +L++ C++ +A LFD++ E +S
Sbjct: 305 VKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSS 364
Query: 174 LAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGE 233
+ L+ ++G L+++M+ + + I+ ++ ++ ++EA IY
Sbjct: 365 YTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDV 424
Query: 234 MRRVDGNMIDWRTYSNLAAIYVKAEQFEKAEV-MLRMMEEEIKPHEREAYHCLLSLYAGT 292
M + G D T + +A+ + + +++++A+ + RMME +K +Y L+ +Y
Sbjct: 425 MEQ-KGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLST-VSYTNLIDVYCKE 482
Query: 293 RNRGEVYRVWDHLKS 307
N E R++ + S
Sbjct: 483 GNVEEAKRLFVEMSS 497
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 123/296 (41%), Gaps = 9/296 (3%)
Query: 78 IRELRKYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLVCKTKGVVAAESFFEGLL--PC 135
+R L K + A+E+++ M R Y + ++ C+ GV A + + C
Sbjct: 211 LRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGC 270
Query: 136 AKNKYTYGALLNCYCKELMADKALALFDKMDEFRFVTSLAFNNLMSMYM-RLGRPEKVPQ 194
+ TY L+N CKE D+A+ + M ++ +N++ M GR +
Sbjct: 271 TPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEK 330
Query: 195 LVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIY 254
L+ DM ++ S T+++ +N L A I +M + G + +Y+ L +
Sbjct: 331 LLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQ-HGCQPNSLSYNPLLHGF 389
Query: 255 VKAEQFEKA-EVMLRMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHL--KSFSPV 311
K ++ ++A E + RM+ P + Y+ +L+ + + + L K SPV
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCYP-DIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPV 448
Query: 312 INTSYLVMLSTLRRLNDIEGITKCLEEWESQCVTYDIRMVSVAVNAYLRHDMDEEA 367
+ T Y ++ L + K L+E ++ + D S V R +EA
Sbjct: 449 LIT-YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 153/362 (42%), Gaps = 25/362 (6%)
Query: 72 SVLENCIRELRKYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLVCKTKGVVAAESFFEG 131
SV I L K ++ A E+M M + ++ + +Y+ ++++C + + A SF
Sbjct: 247 SVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQ 306
Query: 132 LLP--CAKNKYTYGALL-NCYCKELMADKALALFDKMDEFRFVTS--LAFNNLMSMYMRL 186
+L C N YT +L+ C+ + D AL L+++M + +A+N L+ +
Sbjct: 307 MLKRGCHPNIYTLSSLVKGCFLRGTTFD-ALDLWNQMIRGFGLQPNVVAYNTLVQGFCSH 365
Query: 187 GRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRT 246
G K + M + + TY +N A L+ A I+ +M G +
Sbjct: 366 GNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKM-LTSGCCPNVVV 424
Query: 247 YSNLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLLSLY--AGTRNRGE-VYRVWD 303
Y+N+ + +F++AE ++ +M +E ++ + AG + E V+R +
Sbjct: 425 YTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQME 484
Query: 304 HLKSFSPVINTSYLVMLSTLRRLNDIE---GITKCL----EEWESQCVTYDIRMVSVAVN 356
P I T Y +L L + N IE G+T+ + EW S TY+ ++ + N
Sbjct: 485 QQHRCPPNIVT-YNELLDGLAKANRIEEAYGLTREIFMRGVEWSSS--TYN-TLLHGSCN 540
Query: 357 AYLRHDMDEEAESVLKRATMRCKGPFFKIREMFMMFYLKKDQLDGALSHLQAAHSEATIW 416
A + A ++ + + K P M ++ Y K+ + + A L W
Sbjct: 541 A----GLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKW 596
Query: 417 RP 418
RP
Sbjct: 597 RP 598
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/317 (19%), Positives = 137/317 (43%), Gaps = 21/317 (6%)
Query: 57 QILNQYVMQGKAIRKSVLENCIRELRKYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLV 116
+ L V +G +S + + + K + + A +I+ M +Y +D
Sbjct: 42 KFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGH 101
Query: 117 CKTKGVVAAESFFEGL-----LPCAKNKYTYGALLNCYCKELMADKALALFDKMDEFRFV 171
C+ + +A E L C + ++ +L N + K M D+ M +
Sbjct: 102 CRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSP 161
Query: 172 TSLAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIY 231
+ ++ + + + G + + H M++ + + T+ ++ + DL A +Y
Sbjct: 162 NVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLY 221
Query: 232 GEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVML-RMMEEEIKPHEREAYHCLLSLYA 290
EMRRV ++ + TY+ L + K + ++AE M RM+E+ ++P+ Y ++
Sbjct: 222 KEMRRVRMSL-NVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSL-VYTTIID--- 276
Query: 291 GTRNRGEVYRVWDHLKSFSPVIN-------TSYLVMLSTLRRLNDIEGITKCLEEWESQC 343
G RG+ + +K + ++N T+Y V++S L ++ T+ +E+ E
Sbjct: 277 GFFQRGD---SDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSD 333
Query: 344 VTYDIRMVSVAVNAYLR 360
+ D+ + + +NAY +
Sbjct: 334 LVPDMVIFTTMMNAYFK 350
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 120/291 (41%), Gaps = 11/291 (3%)
Query: 78 IRELRKYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLVCKTKGVVAAESFFEGLLPCAK 137
I L K RKF A + + M + + Y++ +D+ C+ + A SF ++
Sbjct: 374 IDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGL 433
Query: 138 --NKYTYGALLNCYCKELMADKALALFDKMDEFRF-VTSLAFNNLMSMYMRLGRPEKVPQ 194
+ Y Y +L+N +CK A +M + T + + +LM Y G+ K +
Sbjct: 434 KLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALR 493
Query: 195 LVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMR--RVDGNMIDWRTYSNLAA 252
L H+M + I S +T+ ++ + + +A +++ EM V N + TY+ +
Sbjct: 494 LYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRV---TYNVMIE 550
Query: 253 IYVKAEQFEKA-EVMLRMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHLKSFSPV 311
Y + KA E + M E+ I P + +Y L+ T E D L +
Sbjct: 551 GYCEEGDMSKAFEFLKEMTEKGIVP-DTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCE 609
Query: 312 IN-TSYLVMLSTLRRLNDIEGITKCLEEWESQCVTYDIRMVSVAVNAYLRH 361
+N Y +L R +E +E + V D+ V ++ L+H
Sbjct: 610 LNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKH 660
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 102/213 (47%), Gaps = 9/213 (4%)
Query: 141 TYGALLNCYCKELMADKALALFDKMDEFRFVTSLA-FNNLMSMYMRLGRPEKVPQLVHDM 199
TY ++ K D A LF +M E + S + F++L+ + GR + ++ +M
Sbjct: 315 TYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEM 374
Query: 200 RQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQ 259
+ SA + ++S A + L+ A R++ EM++ G ++ Y+ + + K+ +
Sbjct: 375 QGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKK-SGFRPNFGLYTMIIESHAKSGK 433
Query: 260 FEKAEVMLRMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHLK--SFSPVINTSYL 317
E A + + ME+ Y CLL ++AG+ ++++ + P + +SY+
Sbjct: 434 LEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGL-SSYI 492
Query: 318 VMLSTL--RRLNDIEGITKCLEEWESQCVTYDI 348
+L+ L +RL D+ G K L E ++ + D+
Sbjct: 493 SLLTLLANKRLVDVAG--KILLEMKAMGYSVDV 523
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 30/197 (15%)
Query: 93 IMEWMEMRKVNFSWD--NYAVYLDLVCKTKGVVAAESFF-----EGLLPCAKNKYTYGAL 145
+M+ EM + + D +Y++ +D + K V A EG+ P N TY A+
Sbjct: 262 LMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEP---NLITYTAI 318
Query: 146 LNCYCKELMADKALALFDKM-------DEFRFVTSLAFNNLMSMYMRLGRPEKVPQLVHD 198
+ CK ++A LF+++ DEF +VT L+ R G + ++ D
Sbjct: 319 IRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVT------LIDGICRKGNLNRAFSMLGD 372
Query: 199 MRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAE 258
M QR I S TY+ +N + ++EA+ + + V G++I TYS L Y+K +
Sbjct: 373 MEQRGIQPSILTYNTVINGLCMAGRVSEADEVS---KGVVGDVI---TYSTLLDSYIKVQ 426
Query: 259 QFEKA-EVMLRMMEEEI 274
+ E+ R +E +I
Sbjct: 427 NIDAVLEIRRRFLEAKI 443
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 86/188 (45%), Gaps = 12/188 (6%)
Query: 90 ALEIMEWMEMRKVNFSWDNYAVYLDLVCKTKGVVAAESFFE-----GLLPCAKNKYTYGA 144
AL + + + R V + Y ++ +C+ +V A F+ GL+P ++ TYG
Sbjct: 674 ALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVP---SEVTYGI 730
Query: 145 LLNCYCKELMADKALALFDKMDEFRFVTSLA-FNNLMSMYMRLGRPEKVPQLVHDMRQRR 203
L++ CKE + A L D M V ++ +N+++ Y +LG+ E ++V R
Sbjct: 731 LIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGR 790
Query: 204 IPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNM-IDWRTYSNLAAIYVKAEQFEK 262
+ AFT + D+ EA ++ E + D N+ D+ + L + + E+
Sbjct: 791 VTPDAFTVSSMIKGYCKKGDMEEALSVFTEFK--DKNISADFFGFLFLIKGFCTKGRMEE 848
Query: 263 AEVMLRMM 270
A +LR M
Sbjct: 849 ARGLLREM 856
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 140/329 (42%), Gaps = 14/329 (4%)
Query: 58 ILNQYVMQGKAIRKSVLENCIRELRKYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLVC 117
+++Q V G I L + K A+ +++ M R Y ++ +C
Sbjct: 170 LVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLC 229
Query: 118 KTKGVVAAESFFEGLLPCAK---NKYTYGALLNCYCKELMADKALALFDKMDEFRFVTS- 173
K A + + AK N Y +++ CK D AL LF +M+ +
Sbjct: 230 KRGDTDLALNLLNKM-EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNV 288
Query: 174 LAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGE 233
+ +++L+S GR +L+ DM +R+I + T+ +++ L +AE++Y E
Sbjct: 289 ITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEE 348
Query: 234 M--RRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLLSLYAG 291
M R +D N+ TYS+L + ++ +A+ ML +M + Y+ L++ +
Sbjct: 349 MIKRSIDPNIF---TYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCK 405
Query: 292 TRNRGEVYRVWDHLKSFSPVINT-SYLVMLSTLRRLNDIEGITKCLEEWESQCVTYDIRM 350
+ + ++ + V NT +Y ++ + D + ++ S V +I
Sbjct: 406 AKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 465
Query: 351 VSVAVNAYLRHDMDEEAESV---LKRATM 376
++ ++ ++ +A V L+R+TM
Sbjct: 466 YNILLDGLCKNGKLAKAMVVFEYLQRSTM 494
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 118/278 (42%), Gaps = 50/278 (17%)
Query: 88 QHALEIMEWMEMRKVNFSWDNY--AVYLDLVCKTKGVVAAESFFEGL---LPCAKNKYTY 142
+ A+E+++ EM K D Y LD +CK V A FE + P N +
Sbjct: 184 KKAVEVLD--EMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFP--PNLRYF 239
Query: 143 GALLNCYCKELMADKALALFDKMDEFRFVTSLA-FNNLMSMYMRLGRPEKVPQLVHDMRQ 201
+LL +C+E +A + +M E + F NL+S Y G+ L++DMR+
Sbjct: 240 TSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRK 299
Query: 202 RRIPISAFTYHVWMNS-CAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQF 260
R + Y V + + C ++EA R++ EM R G D TY+ L + + K
Sbjct: 300 RGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERY-GCEADIVTYTALISGFCKWGMI 358
Query: 261 EKA-EVMLRMMEEEIKP-----------HE-REAYHCLLSLYAGTRNRG----------- 296
+K V+ M ++ + P HE +E + L L + RG
Sbjct: 359 DKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVV 418
Query: 297 -----------EVYRVWDHLKS--FSPVINTSYLVMLS 321
E R+W+ +++ SP ++T +++M++
Sbjct: 419 IRLACKLGEVKEAVRLWNEMEANGLSPGVDT-FVIMIN 455
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 5/176 (2%)
Query: 117 CKTKGVVAAESFFEGLLPCA--KNKYTYGALLNCYCKELMADKALALFDKMDEFRF-VTS 173
CK AE+ F+ + +K Y L+ YCK+ A+ L+ +M E F +
Sbjct: 248 CKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDP 307
Query: 174 LAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGE 233
FN L+ +M+LG +K + M ++ + + FTYH+ + S +++ A R++
Sbjct: 308 CIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVN 367
Query: 234 MRRVDGNMIDWRTYSNLAAIYVKAEQFEKA-EVMLRMMEEEIKPHEREAYHCLLSL 288
+ + Y+NL + K +KA ++++RM++ I P + Y LL +
Sbjct: 368 NTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVP-DHITYFVLLKM 422
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 76/175 (43%), Gaps = 10/175 (5%)
Query: 138 NKYTYGALLNCYCKELMADKALALFDKMDEFRFVTS--LAFNNLMSMYMRLGRPEKVPQL 195
N+ TY LL YCK+L D+A L +M E + +++N ++ + +
Sbjct: 486 NRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAF 545
Query: 196 VHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEM---RRVDGNMIDWRTYSNLAA 252
++MR R I + +Y M + A S A R++ EM RV ++I W L
Sbjct: 546 FNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNM---LVE 602
Query: 253 IYVKAEQFEKAE-VMLRMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHLK 306
Y + E A+ V+ RM E P+ Y L + + R G+ +W +K
Sbjct: 603 GYCRLGLIEDAQRVVSRMKENGFYPNV-ATYGSLANGVSQARKPGDALLLWKEIK 656
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 94/224 (41%), Gaps = 11/224 (4%)
Query: 135 CAKNKYTYGALLNCYCKELMADKALALFDKMDEFRF-VTSLAFNNLMSMYMRLGRPEKVP 193
C N TYG L+N K+ A A+ L M+E + + ++ L+S + G+ E+
Sbjct: 323 CIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAM 382
Query: 194 QLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAI 253
L M ++ + Y V ++ NEA+ I M G + + TYS+L
Sbjct: 383 SLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRM-IASGCLPNAYTYSSLMKG 441
Query: 254 YVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHLKSFSPVIN 313
+ K E+A + + M++ + Y L+ G E VW + + +
Sbjct: 442 FFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPD 501
Query: 314 T-SYLVMLSTLRRLNDIEGITK------CLEEWESQ--CVTYDI 348
T +Y ++ L + ++ K C EE +SQ VTY+I
Sbjct: 502 TVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNI 545
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 83/172 (48%), Gaps = 5/172 (2%)
Query: 136 AKNKYTYGALLNCYCKELMADKALALFDKMDEFRFVT-SLAFNNLMSMYMRLGRPEKVPQ 194
A N T+ ++N YC ++A+ +F +M +F+ +L+FNNLM+ + +
Sbjct: 347 AVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEK 406
Query: 195 LVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNM-IDWRTYSNLAAI 253
L +M ++ + +TY + M++C ++E Y M V+ N+ + Y+ L
Sbjct: 407 LYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTM--VESNLRPNLAVYNRLQDQ 464
Query: 254 YVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHL 305
+KA + + A+ MM ++K + EAY ++ + E+ ++ D +
Sbjct: 465 LIKAGKLDDAKSFFDMMVSKLK-MDDEAYKFIMRALSEAGRLDEMLKIVDEM 515
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/369 (20%), Positives = 145/369 (39%), Gaps = 15/369 (4%)
Query: 78 IRELRKYRKFQHALEIMEWMEMRK------VNFSWDNYAVYLDLVCKTKGVVAAESFFEG 131
I L K R+ ALE+ E M ++ + ++ +D +CK + AE
Sbjct: 336 INTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVR 395
Query: 132 LL---PCAKNKYTYGALLNCYCKELMADKALALFDKMDEFRFVTS-LAFNNLMSMYMRLG 187
+ C N TY L++ YC+ + A + +M E + + N ++ R
Sbjct: 396 MKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHH 455
Query: 188 RPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTY 247
DM + + + TY +++C + +++ +A Y +M G D + Y
Sbjct: 456 GLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA-GCSPDAKIY 514
Query: 248 SNLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVW-DHLK 306
L + + + A ++ ++E + AY+ L+ L+ N +VY + D K
Sbjct: 515 YALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEK 574
Query: 307 SFSPVINTSYLVMLSTLRRLNDIEGITKCLEEWESQCVTYDIRMVSVAVNAYLRHDMDEE 366
+ +Y ++S + D E + + +E+ + + ++AY +E
Sbjct: 575 EGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDE 634
Query: 367 AESVLKRATMRCK-GPFFKIREMFMMFYLKKDQLDGALSHLQAAHSEATIWRPSPEVVGA 425
A + K + K P I + + + K ALS + + + RP+ E A
Sbjct: 635 ALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKE--EMKMKMVRPNVETYNA 692
Query: 426 FLKYYDEKT 434
K +EKT
Sbjct: 693 LFKCLNEKT 701
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 2/165 (1%)
Query: 142 YGALLNCYCKELMADKALALFDKMDEFRFVTSLA-FNNLMSMYMRLGRPEKVPQLVHDMR 200
YGAL++ +CK+ A LF ++ E + +++ +N+L+S + LG+ + L M
Sbjct: 663 YGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMV 722
Query: 201 QRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQF 260
I FTY ++ ++N A +Y E+ + G + D + L K QF
Sbjct: 723 NDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDL-GIVPDEILHMVLVNGLSKKGQF 781
Query: 261 EKAEVMLRMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHL 305
KA ML M+++ Y +++ + N E +R+ D +
Sbjct: 782 LKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEM 826
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 119/279 (42%), Gaps = 19/279 (6%)
Query: 136 AKNKYTYGALLNCYCKELMADKALALFDKMDEFRFVTSL-AFNNLMSMYMRLGRPEKVPQ 194
++N TY +L+ YCK+ + ++A +F+ + E + V + LM Y R G+ +
Sbjct: 293 SRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVR 352
Query: 195 LVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDW------RTYS 248
+ +M + + + + +N S L EAE+I+ M DW TY+
Sbjct: 353 VHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMN-------DWSLKPDHHTYN 405
Query: 249 NLAAIYVKAEQFEKA-EVMLRMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWD-HLK 306
L Y +A ++A ++ +M ++E+ P Y+ LL Y+ +V +W LK
Sbjct: 406 TLVDGYCRAGYVDEALKLCDQMCQKEVVPTVM-TYNILLKGYSRIGAFHDVLSLWKMMLK 464
Query: 307 SFSPVINTSYLVMLSTLRRLNDIEGITKCLEEWESQCVTYDIRMVSVAVNAYLRHDMDEE 366
S +L L +L D K E ++ + D ++V ++ + + E
Sbjct: 465 RGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNE 524
Query: 367 AESVLKRATM-RCKGPFFKIREMFMMFYLKKDQLDGALS 404
A+ +L + RCK P + + Y K L A +
Sbjct: 525 AKEILDNVNIFRCK-PAVQTYQALSHGYYKVGNLKEAFA 562
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 3/156 (1%)
Query: 135 CAKNKYTYGALLNCYCKELMADKALALFDKMDEFRFVTSL-AFNNLMSMYMRLGRPEKVP 193
C N TY L++ +CK M D+ + LF +M F + +N L+ Y ++G+
Sbjct: 312 CFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVAL 371
Query: 194 QLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAI 253
+ M RR+ T+ + ++ + ++ A + +MR + I Y+ +
Sbjct: 372 DIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESE-KYIGIVAYNIMIHG 430
Query: 254 YVKAEQFEKA-EVMLRMMEEEIKPHEREAYHCLLSL 288
KA++ EKA E+ R+ E +KP R +L L
Sbjct: 431 LCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGL 466
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/340 (17%), Positives = 134/340 (39%), Gaps = 42/340 (12%)
Query: 73 VLENCIRELRKYRKFQHALEIMEWMEMRKVNF--SWDNYAVYLDLVCKTKGVVAAESFFE 130
V ++ + +KF++A + +M+M+ F + ++ Y+ + V A F+
Sbjct: 170 VFDSLFKTFAHLKKFRNATDT--FMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYR 227
Query: 131 GLLPC--AKNKYTYGALLNCYCKELMADKALALFDKMDEFRF-VTSLAFNNLMSMYMRLG 187
+ C + N YT +++ YC+ DK + L M+ F T +++N L++ + G
Sbjct: 228 EMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKG 287
Query: 188 RPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRV---------- 237
+L + M + + + T++ ++ + L EA +++GEM+ V
Sbjct: 288 LLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYN 347
Query: 238 ------------------------DGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEEE 273
+G D TY+ L K + KA ++ +++E
Sbjct: 348 TLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKE 407
Query: 274 IKPHEREAYHCLLSLYAGTRNRGEVYRVWDH-LKSFSPVINTSYLVMLSTLRRLNDIEGI 332
+ L+ +N + ++ ++S ++ +++S R D +G
Sbjct: 408 NLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGA 467
Query: 333 TKCLEEWESQCVTYDIRMVSVAVNAYLRHDMDEEAESVLK 372
++ L E + + D R V N D+ + +L+
Sbjct: 468 SQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQ 507
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/340 (17%), Positives = 134/340 (39%), Gaps = 42/340 (12%)
Query: 73 VLENCIRELRKYRKFQHALEIMEWMEMRKVNF--SWDNYAVYLDLVCKTKGVVAAESFFE 130
V ++ + +KF++A + +M+M+ F + ++ Y+ + V A F+
Sbjct: 170 VFDSLFKTFAHLKKFRNATDT--FMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYR 227
Query: 131 GLLPC--AKNKYTYGALLNCYCKELMADKALALFDKMDEFRF-VTSLAFNNLMSMYMRLG 187
+ C + N YT +++ YC+ DK + L M+ F T +++N L++ + G
Sbjct: 228 EMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKG 287
Query: 188 RPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRV---------- 237
+L + M + + + T++ ++ + L EA +++GEM+ V
Sbjct: 288 LLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYN 347
Query: 238 ------------------------DGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEEE 273
+G D TY+ L K + KA ++ +++E
Sbjct: 348 TLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKE 407
Query: 274 IKPHEREAYHCLLSLYAGTRNRGEVYRVWDH-LKSFSPVINTSYLVMLSTLRRLNDIEGI 332
+ L+ +N + ++ ++S ++ +++S R D +G
Sbjct: 408 NLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGA 467
Query: 333 TKCLEEWESQCVTYDIRMVSVAVNAYLRHDMDEEAESVLK 372
++ L E + + D R V N D+ + +L+
Sbjct: 468 SQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQ 507
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 85/167 (50%), Gaps = 6/167 (3%)
Query: 141 TYGALLNCYCKELMADKALALFDKMDEFRFVTSLA-FNNLMSMYMRLGRPEKVPQLVHDM 199
++G L++ Y KE ++AL ++D M + ++L +N++++ + G +V+ M
Sbjct: 468 SFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAM 527
Query: 200 RQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDG-NMIDWRTYSNLAAIYVKAE 258
+ I TY+ +N + ++ EA+ I +M++ DG + T++ + K
Sbjct: 528 EIKDI----VTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFG 583
Query: 259 QFEKAEVMLRMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHL 305
+EKA+ +L+ M E + Y L++ ++ R++ +V + D+L
Sbjct: 584 SYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYL 630
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 138 NKYTYGALLNCYCKELMADKALALFDKMDEFRF-VTSLAFNNLMSMYMRLGRPEKVPQLV 196
N Y + L+N +CKE A +FD++ + T ++FN L++ Y ++G ++ +L
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 197 HDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEM 234
H M + R FTY +N+ N ++ A ++ EM
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEM 336
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 118/269 (43%), Gaps = 11/269 (4%)
Query: 109 YAVYLDLVCKTKGVVAAESFFE-----GLLPCAKNKYTYGALLNCYCKELMADKALALFD 163
Y + +D CK V A E G P TYG++++ K D+A LF+
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV---VTYGSVIDGLAKIDRLDEAYMLFE 646
Query: 164 KMDEFRF-VTSLAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASN 222
+ R + + +++L+ + ++GR ++ ++ ++ Q+ + + +T++ +++ +
Sbjct: 647 EAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAE 706
Query: 223 DLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAY 282
++NEA + M+ + + TY L K +F KA V + M+++ +Y
Sbjct: 707 EINEALVCFQSMKELKCT-PNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISY 765
Query: 283 HCLLSLYAGTRNRGEVYRVWDHLKSFSPVINTS-YLVMLSTLRRLNDIEGITKCLEEWES 341
++S A N E ++D K+ V +++ Y M+ L N EE
Sbjct: 766 TTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRR 825
Query: 342 QCVTYDIRMVSVAVNAYLRHDMDEEAESV 370
+ + + V ++ ++D E+A V
Sbjct: 826 RGLPIHNKTCVVLLDTLHKNDCLEQAAIV 854
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 97/219 (44%), Gaps = 9/219 (4%)
Query: 108 NYAVYLDLVCKTKGVVAAESFFEGLLPCA--KNKYTYGALLNCYCKELMADKALALFDKM 165
+ L+ C+ V A F+ ++ N Y +++ CK D AL L ++M
Sbjct: 153 TFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212
Query: 166 DEFRFVTSLA-FNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDL 224
++ + +N+L+S GR ++V M +R I FT++ +++C +
Sbjct: 213 EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRV 272
Query: 225 NEAERIYGEM--RRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAY 282
+EAE Y EM R +D +++ TYS L + ++AE M M + + Y
Sbjct: 273 SEAEEFYEEMIRRSLDPDIV---TYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTY 329
Query: 283 HCLLSLYAGTRNRGEVYRVWDHLKSFSPVINT-SYLVML 320
L++ Y ++ +++ + V NT +Y +++
Sbjct: 330 SILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILI 368
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 97/240 (40%), Gaps = 43/240 (17%)
Query: 108 NYAVYLDLVCKTKGVVAAESFFE-----GLLP---------------------------- 134
Y + +D +CK V AA FE GL+P
Sbjct: 264 TYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 323
Query: 135 ----CAKNKYTYGALLNCYCKELMADKALALFDKMDEFRFVTS-LAFNNLMSMYMRLGRP 189
C + TY AL+NC+CK L + +M + ++++ L+ + + G
Sbjct: 324 KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMM 383
Query: 190 EKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWR--TY 247
++ + DMR+ + + +TY +++ +L++A R+ EM +V ++W TY
Sbjct: 384 QQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG---VEWNVVTY 440
Query: 248 SNLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHLKS 307
+ L AE+ ++AE + M+ +Y+ L+ + +N + + LK
Sbjct: 441 TALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKG 500
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 119/271 (43%), Gaps = 38/271 (14%)
Query: 83 KYRKFQHALEIMEWME---MRKVNFSWDNYAVYLDLVCKTKGVVAAESFFEGLLPCAK-- 137
K +K + A E+++ ME +R +++ A V K + V A E ++ K
Sbjct: 200 KKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCY--VQKGETVRAESEVVEKMVMKEKAK 257
Query: 138 -NKYTYGALLNCYCKELMADKALALFDKMDEFRFVTSLA-FNNLMSMYMRL--------- 186
N T G ++ YC+E L +M E R +L FN+L++ ++ +
Sbjct: 258 PNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEV 317
Query: 187 ----------------GRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERI 230
G + Q++ M++ + TY MN+ +++ + +A ++
Sbjct: 318 TLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQV 377
Query: 231 YGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLLSLYA 290
+ EM + G D YS LA YV+A++ +KAE +L + E +P+ + ++S +
Sbjct: 378 FKEMVKA-GVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPN-VVIFTTVISGWC 435
Query: 291 GTRNRGEVYRVWDHLKSF--SPVINTSYLVM 319
+ + RV++ + F SP I T +M
Sbjct: 436 SNGSMDDAMRVFNKMCKFGVSPNIKTFETLM 466
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 93/200 (46%), Gaps = 8/200 (4%)
Query: 96 WMEMRKVNFSWDNYAVYLDL--VCKTKGVVAAESFFEGLLP--CAKNKYTYGALLNCYCK 151
+M MR + D Y+ + + CKT AA + C N Y ++ + +
Sbjct: 134 YMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYE 193
Query: 152 ELMADKALALFDKMDEFRFVTSLA-FNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISAFT 210
E + LF KM L+ FN L+ + + G ++ +L+ + +R + + FT
Sbjct: 194 ENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFT 253
Query: 211 YHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVML-RM 269
Y++++ +L+ A R+ G + G D TY+NL K +F++AEV L +M
Sbjct: 254 YNLFIQGLCQRGELDGAVRMVGCLIE-QGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKM 312
Query: 270 MEEEIKPHEREAYHCLLSLY 289
+ E ++P + Y+ L++ Y
Sbjct: 313 VNEGLEP-DSYTYNTLIAGY 331
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 11/202 (5%)
Query: 78 IRELRKYRKFQHALEIMEWMEMRKVNFSWDNYAVYLDLVCKTKGVVAAESFF-----EGL 132
I+ L + AL +++ ME + + Y V +D +C A +GL
Sbjct: 330 IKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGL 389
Query: 133 LPCAKNKYTYGALLNCYCKELMADKALALFDKMDEFRFV-TSLAFNNLMSMYMRLGRPEK 191
+P N TY AL+N YCK M + A+ + + M+ + + +N L+ Y + K
Sbjct: 390 MP---NVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHK 445
Query: 192 VPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLA 251
+++ M +R++ TY+ ++ S + + A R+ M G + D TY+++
Sbjct: 446 AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMND-RGLVPDQWTYTSMI 504
Query: 252 AIYVKAEQFEKAEVMLRMMEEE 273
K+++ E+A + +E++
Sbjct: 505 DSLCKSKRVEEACDLFDSLEQK 526
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 4/182 (2%)
Query: 90 ALEIMEWMEMRKVNFSWDNYAVYLDLVCKTKGVVAAESFFEGL--LPCAKNKYTYGALLN 147
AL+++ ME R V Y+ +D +C+ + AA S F+ + + TY +L+
Sbjct: 212 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271
Query: 148 CYCKELM-ADKALALFDKMDEFRFVTSLAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPI 206
CK D AL L D + + FN L+ ++++ G+ ++ +L +M R I
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 207 SAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKAEVM 266
+ TY+ M+ N L+EA + M R + D T+++L Y ++ + +
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVR-NKCSPDIVTFTSLIKGYCMVKRVDDGMKV 390
Query: 267 LR 268
R
Sbjct: 391 FR 392
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 89/201 (44%), Gaps = 14/201 (6%)
Query: 187 GRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRT 246
GR + L ++RQ I Y+ + + L +AE + EM + G D T
Sbjct: 318 GRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEK-RGVSPDEHT 376
Query: 247 YSNLAAIYVKAEQFEKAEVMLRMMEE-EIKPHEREAYHCLLSLYAGTRNRGE---VYRVW 302
YS L YV A ++E A ++L+ ME +++P+ L AG R+RGE ++V
Sbjct: 377 YSLLIDAYVNAGRWESARIVLKEMEAGDVQPNS----FVFSRLLAGFRDRGEWQKTFQVL 432
Query: 303 DHLKSFSPVINTS-YLVMLSTLRRLNDIEGITKCLEEWESQCVTYDIRMVSVAVNAYLRH 361
+KS + Y V++ T + N ++ + S+ + D + ++ + +H
Sbjct: 433 KEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKH 492
Query: 362 D----MDEEAESVLKRATMRC 378
+E E++ +R + C
Sbjct: 493 GRHIVAEEMFEAMERRGCLPC 513
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 101/223 (45%), Gaps = 8/223 (3%)
Query: 78 IRELRKYRKFQHALEIMEWMEMRKVNFSWDNYAV--YLDLVCKTKGVVAAESFFEGLLP- 134
IR L K +K A + + EM + +F D+ +D +C+ V A + +L
Sbjct: 303 IRALCKEKKSGEARNMFD--EMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKN 360
Query: 135 -CAKNKYTYGALLNCYCKELMADKALALFDKMDEFRFVTSLAFNNLMSMYMRLGRPEKVP 193
C + L++ CKE +A LFD+ ++ + L +N L++ G +
Sbjct: 361 NCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEKGELTEAG 420
Query: 194 QLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAI 253
+L DM +R+ +AFTY+V + + + ++ E R+ EM + G + T+ L
Sbjct: 421 RLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEI-GCFPNKTTFLILFEG 479
Query: 254 YVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLLSLYAGTRNRG 296
K + E A ++ M K ++E++ L +AG ++G
Sbjct: 480 LQKLGKEEDAMKIVSMAVMNGK-VDKESWELFLKKFAGELDKG 521
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 56/106 (52%), Gaps = 7/106 (6%)
Query: 138 NKYTYGALLNCYCKELMADKALALFDKMDEFRFVTSLAFNNLMSMYMRLGRPEKVPQLVH 197
+ YT LLN CKE M +KAL F+ + E R V ++ +N ++S + + + ++ L+
Sbjct: 590 DNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLS 649
Query: 198 DMRQRRIPISAFTYHVWMNSCAASNDLNEAERI-------YGEMRR 236
+M ++ + FTY+ +++ L+E + + +G M+R
Sbjct: 650 EMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKR 695
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Query: 135 CAKNKYTYGALLNCYCKELMADKALALFDKMDEFRFVT-SLAFNNLMSMYMRLGRPEKVP 193
C N+ Y L++ +CK + + +F +M + V ++ + L+ Y +GRP+
Sbjct: 324 CYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQ 383
Query: 194 QLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAI 253
++ + M RR P TY+V ++ + + +A I+ MR+ + + I+ TY+ +
Sbjct: 384 EVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMD-INIVTYTIIIQG 442
Query: 254 YVKAEQFEKA-EVMLRMMEEEIKPH 277
K + E A ++ + + +KP+
Sbjct: 443 MCKLGKVEDAFDLFCSLFSKGMKPN 467
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 124/319 (38%), Gaps = 42/319 (13%)
Query: 50 KTGGSVSQILNQYVMQGKAIRKSVLENCIRELRKYRKFQHALEIMEWMEMRKVNFSWD-- 107
K GG V+ + +M + ++E + RK+ + EMR+V + +
Sbjct: 510 KRGGLVADVYTYTIMVDSFCKAGLIE----QARKW-----------FNEMREVGCTPNVV 554
Query: 108 NYAVYLDLVCKTKGVVAAESFFEGLLP--CAKNKYTYGALLNCYCKELMADKALALFDKM 165
Y + K K V A FE +L C N TY AL++ +CK +KA +F++M
Sbjct: 555 TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
Query: 166 -----------------DEFRFVTSLAFNNLMSMYMRLGRPEKVPQLVHDMRQRRIPISA 208
D + + L+ + + R E+ +L+ M +
Sbjct: 615 CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQ 674
Query: 209 FTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEKA-EVML 267
Y ++ L+EA+ + EM G TYS+L Y K ++ + A +V+
Sbjct: 675 IVYDALIDGLCKVGKLDEAQEVKTEMSE-HGFPATLYTYSSLIDRYFKVKRQDLASKVLS 733
Query: 268 RMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHL--KSFSPVINTSYLVMLSTLRR 325
+M+E P+ Y ++ E Y++ + K P + T Y M+
Sbjct: 734 KMLENSCAPN-VVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVT-YTAMIDGFGM 791
Query: 326 LNDIEGITKCLEEWESQCV 344
+ IE + LE S+ V
Sbjct: 792 IGKIETCLELLERMGSKGV 810
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 83/188 (44%), Gaps = 5/188 (2%)
Query: 87 FQHALEIMEWMEMRKVNFSWDNYAVYLDLVCKTKGVVAAESFFEGLLPCAKNKYT---YG 143
F AL++ + M +KV + + + +CK V A +L + T Y
Sbjct: 168 FDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYA 227
Query: 144 ALLNCYCKELMADKALALFDKMDEFRF-VTSLAFNNLMSMYMRLGRPEKVPQLVHDMRQR 202
+L+ C+ A L D+ E + V + ++ L+S ++ GR +V ++ +M ++
Sbjct: 228 SLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEK 287
Query: 203 RIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAAIYVKAEQFEK 262
TY+V +N ND A R+ EM G D +Y+ + ++ + +++E+
Sbjct: 288 GCKPDTVTYNVLINGFCVENDSESANRVLDEMVE-KGLKPDVISYNMILGVFFRIKKWEE 346
Query: 263 AEVMLRMM 270
A + M
Sbjct: 347 ATYLFEDM 354
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 102/240 (42%), Gaps = 6/240 (2%)
Query: 135 CAKNKYTYGALLNCYCKE-LMADKALALFDKMDEFRFVTSL-AFNNLMSMYMRLGRPEKV 192
C + +TY +L +E + A A++++M + +L F LM + GR
Sbjct: 158 CRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDA 217
Query: 193 PQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYSNLAA 252
++ DM R I + TY + ++ ++A +++ EM + GN D ++ L
Sbjct: 218 QKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEM-QTSGNYPDSVAHNALLD 276
Query: 253 IYVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHL--KSFSP 310
+ K + +A +LR+ E++ Y L+ R + + ++ ++ K+ P
Sbjct: 277 GFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKP 336
Query: 311 VINTSYLVMLSTLRRLNDIEGITKCLEEWESQCVTYDIRMVSVAVNAYLRHDMDEEAESV 370
I Y +++ L + IE K L S+ ++ D + + A + EE S+
Sbjct: 337 DI-ILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSL 395
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 21/163 (12%)
Query: 137 KNKYTYGALLNCYCKELMADKALALFDKMDEFRFVTS-----------LAFNNLMSMYMR 185
+ KYT+ L CY + LAL +D RFV+S A N L+ + +
Sbjct: 145 QKKYTHN--LECYVSLV---DVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGK 199
Query: 186 LGRPEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMR--RVDGNMID 243
LG E++ + M++ I + +TY+ MN ++ ++ AER++ M R+ +++
Sbjct: 200 LGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIV- 258
Query: 244 WRTYSNLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLL 286
TY+ + Y KA Q +KA LR ME ++ Y ++
Sbjct: 259 --TYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMI 299
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 97/246 (39%), Gaps = 3/246 (1%)
Query: 130 EGLLPCAKNKYTYGALLNCYCKELMADKALALFDKMDEFRFVTSL-AFNNLMSMYMRLGR 188
+G+ C N TY LL + + D+ ALF +D + FN +M Y + G
Sbjct: 199 KGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGM 258
Query: 189 PEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYS 248
+++ ++ MR T++V ++S + + E+ + + R T++
Sbjct: 259 IKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMR-SKEKPTLPTFN 317
Query: 249 NLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHLKSF 308
++ Y KA +KAE + + M + Y C++ +Y + +++ +
Sbjct: 318 SMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGES 377
Query: 309 SPVINTSYL-VMLSTLRRLNDIEGITKCLEEWESQCVTYDIRMVSVAVNAYLRHDMDEEA 367
V+ S L ML R K + V D AY + DM E+
Sbjct: 378 DRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQV 437
Query: 368 ESVLKR 373
+ ++K+
Sbjct: 438 QILMKK 443
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 120/274 (43%), Gaps = 14/274 (5%)
Query: 141 TYGALLNCYCKELMADKALALFDKMDEFRFVTSL-AFNNLMSMYMRLGRPEKVPQLVH-D 198
TY +L++ K LM ++ L LFD+M + ++N LMS Y +LGR + +++H D
Sbjct: 85 TYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHED 144
Query: 199 MRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMR-RVDGNMIDWRTYSNLAAIYVKA 257
+ + TY++ +++ S + A ++ ++ RV ++ TY+ L K+
Sbjct: 145 IHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKPELM---TYNILINGLCKS 201
Query: 258 EQFEKAEVMLRMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHLK----SFSPVIN 313
+ + M+R +++ Y +L +Y T+ + +++ +K +F N
Sbjct: 202 RRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFAN 261
Query: 314 TSYLVMLSTLRRLNDIEGITKCLEEW-ESQCVTYDIRMVSVAVNAYLRHDMDEEAESVLK 372
+ ++S L + E +C+ E S + DI + +N Y + + + +L+
Sbjct: 262 CA---VVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLE 318
Query: 373 RATMRCKGPFFKIREMFMMFYLKKDQLDGALSHL 406
M+ P + + L GA HL
Sbjct: 319 EIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHL 352
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 105/249 (42%), Gaps = 17/249 (6%)
Query: 131 GLLPCAKNKYTYGALLNCYCKELMADKALALFDKMD-EFRFVTSLAFNNLMSMYMRLGRP 189
G PC +Y ++ CYC++ K + +M+ S+ + +MS
Sbjct: 254 GFRPCV---ISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEF 310
Query: 190 EKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYG-EMRRVDGNMIDWRTYS 248
E+ ++ M++ + Y+ +++ A + L EAER++ EM + G I+ TY+
Sbjct: 311 EEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPEL-GVSINTSTYN 369
Query: 249 NLAAIYVKAEQFEKAEVMLRMMEEE--IKPHEREAYHCLLSLYAGTRNRGEVYRVWDHLK 306
++ A+Y ++ +KA +L+ ME P H L RG+V V LK
Sbjct: 370 SMIAMYCHHDEEDKAIELLKEMESSNLCNPD----VHTYQPLLRSCFKRGDVVEVGKLLK 425
Query: 307 SFS-----PVINTSYLVMLSTLRRLNDIEGITKCLEEWESQCVTYDIRMVSVAVNAYLRH 361
+ ++Y ++ L R N E EE SQ +T R + + +
Sbjct: 426 EMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKK 485
Query: 362 DMDEEAESV 370
+M E AE +
Sbjct: 486 NMHESAERI 494
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 105/249 (42%), Gaps = 17/249 (6%)
Query: 131 GLLPCAKNKYTYGALLNCYCKELMADKALALFDKMD-EFRFVTSLAFNNLMSMYMRLGRP 189
G PC +Y ++ CYC++ K + +M+ S+ + +MS
Sbjct: 254 GFRPCV---ISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEF 310
Query: 190 EKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYG-EMRRVDGNMIDWRTYS 248
E+ ++ M++ + Y+ +++ A + L EAER++ EM + G I+ TY+
Sbjct: 311 EEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPEL-GVSINTSTYN 369
Query: 249 NLAAIYVKAEQFEKAEVMLRMMEEE--IKPHEREAYHCLLSLYAGTRNRGEVYRVWDHLK 306
++ A+Y ++ +KA +L+ ME P H L RG+V V LK
Sbjct: 370 SMIAMYCHHDEEDKAIELLKEMESSNLCNPD----VHTYQPLLRSCFKRGDVVEVGKLLK 425
Query: 307 SFS-----PVINTSYLVMLSTLRRLNDIEGITKCLEEWESQCVTYDIRMVSVAVNAYLRH 361
+ ++Y ++ L R N E EE SQ +T R + + +
Sbjct: 426 EMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKK 485
Query: 362 DMDEEAESV 370
+M E AE +
Sbjct: 486 NMHESAERI 494
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 97/246 (39%), Gaps = 3/246 (1%)
Query: 130 EGLLPCAKNKYTYGALLNCYCKELMADKALALFDKMDEFRFVTSL-AFNNLMSMYMRLGR 188
+G+ C N TY LL + + D+ ALF +D + FN +M Y + G
Sbjct: 199 KGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGM 258
Query: 189 PEKVPQLVHDMRQRRIPISAFTYHVWMNSCAASNDLNEAERIYGEMRRVDGNMIDWRTYS 248
+++ ++ MR T++V ++S + + E+ + + R T++
Sbjct: 259 IKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMR-SKEKPTLPTFN 317
Query: 249 NLAAIYVKAEQFEKAEVMLRMMEEEIKPHEREAYHCLLSLYAGTRNRGEVYRVWDHLKSF 308
++ Y KA +KAE + + M + Y C++ +Y + +++ +
Sbjct: 318 SMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGES 377
Query: 309 SPVINTSYL-VMLSTLRRLNDIEGITKCLEEWESQCVTYDIRMVSVAVNAYLRHDMDEEA 367
V+ S L ML R K + V D AY + DM E+
Sbjct: 378 DRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQV 437
Query: 368 ESVLKR 373
+ ++K+
Sbjct: 438 QILMKK 443