Miyakogusa Predicted Gene
- Lj5g3v1573150.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1573150.1 tr|B9RA17|B9RA17_RICCO Pectinesterase OS=Ricinus
communis GN=RCOM_1502810 PE=3
SV=1,43.8,2e-19,Pectinesterase,Pectinesterase, catalytic; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; Pectin ly,CUFF.55530.1
(172 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G47500.1 | Symbols: | Pectin lyase-like superfamily protein ... 96 8e-21
AT5G07430.1 | Symbols: | Pectin lyase-like superfamily protein ... 92 2e-19
AT5G55590.1 | Symbols: QRT1 | Pectin lyase-like superfamily prot... 91 3e-19
AT5G61680.1 | Symbols: | Pectin lyase-like superfamily protein ... 91 4e-19
AT5G07420.1 | Symbols: | Pectin lyase-like superfamily protein ... 88 3e-18
AT1G69940.1 | Symbols: ATPPME1, PPME1 | Pectin lyase-like superf... 85 2e-17
AT3G29090.1 | Symbols: PME31, ATPME31 | pectin methylesterase 31... 83 1e-16
AT5G19730.1 | Symbols: | Pectin lyase-like superfamily protein ... 81 3e-16
AT5G07410.1 | Symbols: | Pectin lyase-like superfamily protein ... 81 4e-16
AT3G05610.1 | Symbols: | Plant invertase/pectin methylesterase ... 80 1e-15
AT3G06830.1 | Symbols: | Plant invertase/pectin methylesterase ... 78 3e-15
AT4G15980.1 | Symbols: | Plant invertase/pectin methylesterase ... 77 4e-15
AT5G27870.1 | Symbols: | Plant invertase/pectin methylesterase ... 76 9e-15
AT5G49180.1 | Symbols: | Plant invertase/pectin methylesterase ... 75 2e-14
AT1G23200.1 | Symbols: | Plant invertase/pectin methylesterase ... 73 9e-14
AT1G53830.1 | Symbols: ATPME2, PME2 | pectin methylesterase 2 | ... 73 9e-14
AT3G14310.1 | Symbols: ATPME3, PME3 | pectin methylesterase 3 | ... 70 6e-13
AT1G05310.1 | Symbols: | Pectin lyase-like superfamily protein ... 69 1e-12
AT1G11580.1 | Symbols: ATPMEPCRA, PMEPCRA | methylesterase PCR A... 69 2e-12
AT3G05620.1 | Symbols: | Plant invertase/pectin methylesterase ... 68 3e-12
AT4G02330.1 | Symbols: ATPMEPCRB | Plant invertase/pectin methyl... 67 5e-12
AT3G27980.1 | Symbols: | Plant invertase/pectin methylesterase ... 66 1e-11
AT5G09760.1 | Symbols: | Plant invertase/pectin methylesterase ... 65 2e-11
AT1G11370.1 | Symbols: | Pectin lyase-like superfamily protein ... 65 2e-11
AT2G47040.1 | Symbols: VGD1 | Plant invertase/pectin methylester... 65 2e-11
AT3G43270.1 | Symbols: | Plant invertase/pectin methylesterase ... 65 3e-11
AT4G03930.1 | Symbols: | Plant invertase/pectin methylesterase ... 65 3e-11
AT4G02320.1 | Symbols: | Plant invertase/pectin methylesterase ... 65 3e-11
AT1G11590.1 | Symbols: | Plant invertase/pectin methylesterase ... 64 5e-11
AT2G26440.1 | Symbols: | Plant invertase/pectin methylesterase ... 64 5e-11
AT2G47030.1 | Symbols: VGDH1 | Plant invertase/pectin methyleste... 63 8e-11
AT2G21610.1 | Symbols: PE11, ATPE11 | pectinesterase 11 | chr2:9... 63 1e-10
AT4G33220.1 | Symbols: PME44, ATPME44 | pectin methylesterase 44... 63 1e-10
AT5G53370.1 | Symbols: ATPMEPCRF, PMEPCRF | pectin methylesteras... 62 1e-10
AT4G33230.1 | Symbols: | Plant invertase/pectin methylesterase ... 61 5e-10
AT1G02810.1 | Symbols: | Plant invertase/pectin methylesterase ... 60 5e-10
AT5G18990.1 | Symbols: | Pectin lyase-like superfamily protein ... 60 7e-10
AT3G62170.1 | Symbols: VGDH2 | VANGUARD 1 homolog 2 | chr3:23016... 60 8e-10
AT2G26450.1 | Symbols: | Plant invertase/pectin methylesterase ... 60 8e-10
AT4G00190.1 | Symbols: PME38, ATPME38 | pectin methylesterase 38... 59 2e-09
AT3G17060.1 | Symbols: | Pectin lyase-like superfamily protein ... 58 2e-09
AT2G45220.1 | Symbols: | Plant invertase/pectin methylesterase ... 57 6e-09
AT3G49220.1 | Symbols: | Plant invertase/pectin methylesterase ... 57 6e-09
AT5G64640.1 | Symbols: | Plant invertase/pectin methylesterase ... 56 1e-08
AT4G02300.1 | Symbols: | Plant invertase/pectin methylesterase ... 56 2e-08
AT3G10710.1 | Symbols: RHS12 | root hair specific 12 | chr3:3352... 55 2e-08
AT5G04960.1 | Symbols: | Plant invertase/pectin methylesterase ... 54 4e-08
AT2G47550.1 | Symbols: | Plant invertase/pectin methylesterase ... 54 4e-08
AT5G51500.1 | Symbols: | Plant invertase/pectin methylesterase ... 54 4e-08
AT2G47280.1 | Symbols: | Pectin lyase-like superfamily protein ... 54 5e-08
AT3G24130.1 | Symbols: | Pectin lyase-like superfamily protein ... 54 6e-08
AT1G53840.1 | Symbols: ATPME1, PME1 | pectin methylesterase 1 | ... 53 1e-07
AT2G36710.1 | Symbols: | Pectin lyase-like superfamily protein ... 53 1e-07
AT3G60730.1 | Symbols: | Plant invertase/pectin methylesterase ... 52 2e-07
AT3G59010.1 | Symbols: PME61 | pectin methylesterase 61 | chr3:2... 52 3e-07
AT5G51490.1 | Symbols: | Plant invertase/pectin methylesterase ... 48 3e-06
AT3G14300.1 | Symbols: ATPMEPCRC, ATPME26, PME26 | pectinesteras... 48 4e-06
>AT5G47500.1 | Symbols: | Pectin lyase-like superfamily protein |
chr5:19271262-19272845 REVERSE LENGTH=362
Length = 362
Score = 96.3 bits (238), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 67/101 (66%)
Query: 68 ITVSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYREKVMIPRTLPFITFLGDALDP 127
ITVS +G F+++ +A++SIP N + + + IAPG YREKV++P T P+ITF G D
Sbjct: 61 ITVSLNGHAQFRSVQDAVDSIPKNNNKSITIKIAPGFYREKVVVPATKPYITFKGAGRDV 120
Query: 128 PTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINIKF 168
I +D AS G+NG L T+++A+V V A+YF A NI F
Sbjct: 121 TAIEWHDRASDLGANGQQLRTYQTASVTVYANYFTARNISF 161
>AT5G07430.1 | Symbols: | Pectin lyase-like superfamily protein |
chr5:2352549-2354069 FORWARD LENGTH=361
Length = 361
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 73/138 (52%), Gaps = 16/138 (11%)
Query: 29 KWISWNVKSYHQKKTVLGTKWNLAAPDLKLRQAESDKVRITVSQDGAGDFKTITEAINSI 88
+W NVK Y Q+K L D L AE+ + ITV+Q G +FKT+ EAI SI
Sbjct: 37 QWFKTNVKPYSQRKGTL---------DPALEAAEAARQIITVNQKGGANFKTLNEAIKSI 87
Query: 89 PPRNTRRVIVMIAPGVYREKVMIPRTLPFITFLGDALDPPTITGNDTASVTGSNGAPLGT 148
P N RVI+ +APGVY EKV I PFIT LG +T + TA A GT
Sbjct: 88 PTGNKNRVIIKLAPGVYNEKVTIDIARPFITLLGQPGAETVLTYHGTA-------AQYGT 140
Query: 149 FRSATVAVDASYFIAINI 166
SAT+ V A YF A ++
Sbjct: 141 VESATLIVWAEYFQAAHL 158
>AT5G55590.1 | Symbols: QRT1 | Pectin lyase-like superfamily protein
| chr5:22519911-22521699 FORWARD LENGTH=380
Length = 380
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 70/104 (67%), Gaps = 2/104 (1%)
Query: 68 ITVSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYREKVMIPRTLPFITFLGDA--L 125
I V ++G GD T+ A++ +P N++RV + I PG+YREKV++P++ P+I+F+G+
Sbjct: 82 IVVDKNGGGDSVTVQGAVDMVPDSNSQRVKIFILPGIYREKVIVPKSKPYISFIGNESYA 141
Query: 126 DPPTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINIKFE 169
I+ +D AS G +G LGT+R+A+V++++ +F A I FE
Sbjct: 142 GDTVISWSDKASDLGCDGKELGTYRTASVSIESDFFCATAITFE 185
>AT5G61680.1 | Symbols: | Pectin lyase-like superfamily protein |
chr5:24786416-24788015 REVERSE LENGTH=338
Length = 338
Score = 90.5 bits (223), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 62/97 (63%), Gaps = 7/97 (7%)
Query: 70 VSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYREKVMIPRTLPFITFLGDALDPPT 129
V Q+G G FKTITEAINS+ NTRRVI+ I PGVY+EKV I R+ PFIT G P
Sbjct: 45 VKQNGRGHFKTITEAINSVRAGNTRRVIIKIGPGVYKEKVTIDRSKPFITLYGHPNAMPV 104
Query: 130 ITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINI 166
+T + TA A GT SAT+ V + YF+A+NI
Sbjct: 105 LTFDGTA-------AQYGTVDSATLIVLSDYFMAVNI 134
>AT5G07420.1 | Symbols: | Pectin lyase-like superfamily protein |
chr5:2349547-2351366 FORWARD LENGTH=361
Length = 361
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 73/138 (52%), Gaps = 16/138 (11%)
Query: 29 KWISWNVKSYHQKKTVLGTKWNLAAPDLKLRQAESDKVRITVSQDGAGDFKTITEAINSI 88
+W NVK + Q++ L D +L AE+ + I V+Q+G GDFKTI AI SI
Sbjct: 37 QWFMANVKPFSQRRGTL---------DPELEAAEASRRVIIVNQNGGGDFKTINAAIKSI 87
Query: 89 PPRNTRRVIVMIAPGVYREKVMIPRTLPFITFLGDALDPPTITGNDTASVTGSNGAPLGT 148
P N RVI+ +APG+Y EKV + P++T LG G +T A GT
Sbjct: 88 PLANKNRVIIKLAPGIYHEKVTVDVGRPYVTLLGKP-------GAETNLTYAGTAAKYGT 140
Query: 149 FRSATVAVDASYFIAINI 166
SAT+ V A+ F+A N+
Sbjct: 141 VESATLIVWATNFLAANL 158
>AT1G69940.1 | Symbols: ATPPME1, PPME1 | Pectin lyase-like
superfamily protein | chr1:26343549-26344971 REVERSE
LENGTH=361
Length = 361
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 77/138 (55%), Gaps = 18/138 (13%)
Query: 29 KWISWNVKSYHQKKTVLGTKWNLAAPDLKLRQAESDKVRITVSQDGAGDFKTITEAINSI 88
+W + NV Q+K + D L AE+ I V+ G G+FKT+T+AI S+
Sbjct: 38 QWFNANVGPLAQRKGL----------DPALVAAEAAPRIINVNPKG-GEFKTLTDAIKSV 86
Query: 89 PPRNTRRVIVMIAPGVYREKVMIPRTLPFITFLGDALDPPTITGNDTASVTGSNGAPLGT 148
P NT+RVI+ +APG Y+EKV I R PFIT +G P IT + TA A GT
Sbjct: 87 PAGNTKRVIIKMAPGEYKEKVTIDRNKPFITLMGQPNAMPVITYDGTA-------AKYGT 139
Query: 149 FRSATVAVDASYFIAINI 166
SA++ + + YF+A+NI
Sbjct: 140 VDSASLIILSDYFMAVNI 157
>AT3G29090.1 | Symbols: PME31, ATPME31 | pectin methylesterase 31 |
chr3:11073804-11075335 FORWARD LENGTH=317
Length = 317
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 66/106 (62%), Gaps = 4/106 (3%)
Query: 68 ITVSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYREKVMIPRTLPFITFLGDALDP 127
+ VSQDG+GD+ ++ +AI+S+P NT R ++ ++PG+YR+ V +P+ FITF G + +
Sbjct: 7 VRVSQDGSGDYCSVQDAIDSVPLGNTCRTVIRLSPGIYRQPVYVPKRKNFITFAGISPEI 66
Query: 128 PTITGNDTASVTGSNGAP----LGTFRSATVAVDASYFIAINIKFE 169
+T N+TAS + A GTF +V V+ FIA NI FE
Sbjct: 67 TVLTWNNTASKIEHHQASRVIGTGTFGCGSVIVEGEDFIAENITFE 112
>AT5G19730.1 | Symbols: | Pectin lyase-like superfamily protein |
chr5:6670562-6673202 FORWARD LENGTH=383
Length = 383
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 58/94 (61%)
Query: 76 GDFKTITEAINSIPPRNTRRVIVMIAPGVYREKVMIPRTLPFITFLGDALDPPTITGNDT 135
GDF I +AI+S+P N RV++ + GVY+EKV IP FIT G+ + T+ DT
Sbjct: 94 GDFTKIQDAIDSLPLINFVRVVIKVHAGVYKEKVSIPPLKAFITIEGEGAEKTTVEWGDT 153
Query: 136 ASVTGSNGAPLGTFRSATVAVDASYFIAINIKFE 169
A S G P+GT+ SA+ AV++ +F+A NI F
Sbjct: 154 AQTPDSKGNPMGTYNSASFAVNSPFFVAKNITFR 187
>AT5G07410.1 | Symbols: | Pectin lyase-like superfamily protein |
chr5:2345852-2347276 FORWARD LENGTH=361
Length = 361
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 76/138 (55%), Gaps = 18/138 (13%)
Query: 29 KWISWNVKSYHQKKTVLGTKWNLAAPDLKLRQAESDKVRITVSQDGAGDFKTITEAINSI 88
+W + +V Q+K + D L AE+ I V+ G G+FKT+T+AI S+
Sbjct: 38 QWFNTHVGPLAQRKGL----------DPALVAAEAAPRIINVNPKG-GEFKTLTDAIKSV 86
Query: 89 PPRNTRRVIVMIAPGVYREKVMIPRTLPFITFLGDALDPPTITGNDTASVTGSNGAPLGT 148
P NT+RVI+ +A G YREKV I R PFIT +G P IT + TA A GT
Sbjct: 87 PAGNTKRVIIKMAHGEYREKVTIDRNKPFITLMGQPNAMPVITYDGTA-------AKYGT 139
Query: 149 FRSATVAVDASYFIAINI 166
SA++ + + YF+A+NI
Sbjct: 140 VDSASLIILSDYFMAVNI 157
>AT3G05610.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr3:1625876-1627976 REVERSE
LENGTH=669
Length = 669
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 68/115 (59%), Gaps = 7/115 (6%)
Query: 56 LKLRQAESD-KVRITVSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYREKVMIPRT 114
L+ A SD K I V+QDG+G +KTI EA+ +P + +V I G+Y+E V + +T
Sbjct: 243 LQAAAAYSDVKPDIVVAQDGSGQYKTINEALQFVPKKRNTTFVVHIKAGLYKEYVQVNKT 302
Query: 115 LPFITFLGDALDPPTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINIKFE 169
+ + F+GD D I+GN +G + T+R+ATVA+ +YFIA NI FE
Sbjct: 303 MSHLVFIGDGPDKTIISGNKNY----KDG--ITTYRTATVAIVGNYFIAKNIGFE 351
>AT3G06830.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr3:2154193-2156062 FORWARD
LENGTH=568
Length = 568
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 5/105 (4%)
Query: 65 KVRITVSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYREKVMIPRTLPFITFLGDA 124
K V+QDG G FKTIT+A+N++P N I+ I G+Y+EKV + + +P +TF+GD
Sbjct: 255 KANAVVAQDGTGQFKTITDALNAVPKGNKVPFIIHIKEGIYKEKVTVTKKMPHVTFIGDG 314
Query: 125 LDPPTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINIKFE 169
+ ITG+ + + TF +AT+ ++ +F A NI E
Sbjct: 315 PNKTLITGSLNFGI-----GKVKTFLTATITIEGDHFTAKNIGIE 354
>AT4G15980.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr4:9057466-9059983 REVERSE
LENGTH=701
Length = 701
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 66/105 (62%), Gaps = 5/105 (4%)
Query: 65 KVRITVSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYREKVMIPRTLPFITFLGDA 124
K + V++DG+G KTI +A+ +P +NT++ ++ I GVY+EKV + + + + F+GD
Sbjct: 389 KANVVVAKDGSGKCKTIAQALAMVPMKNTKKFVIHIKEGVYKEKVEVTKKMLHVMFVGDG 448
Query: 125 LDPPTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINIKFE 169
ITG D A + +GT+R+A+VAV+ YF+A +I FE
Sbjct: 449 PTKTVITG-DIAFLPDQ----VGTYRTASVAVNGDYFMAKDIGFE 488
>AT5G27870.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr5:9878991-9881806 REVERSE
LENGTH=732
Length = 732
Score = 76.3 bits (186), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 64/105 (60%), Gaps = 6/105 (5%)
Query: 65 KVRITVSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYREKVMIPRTLPFITFLGDA 124
K I V+QDG+G +KTI EA+N +P + +V I G+Y+E V + R++ + F+GD
Sbjct: 250 KPDIVVAQDGSGQYKTINEALNFVPKKKNTTFVVHIKEGIYKEYVQVNRSMTHLVFIGDG 309
Query: 125 LDPPTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINIKFE 169
D I+G S + +G + T+++ATVA+ +FIA NI FE
Sbjct: 310 PDKTVISG----SKSYKDG--ITTYKTATVAIVGDHFIAKNIAFE 348
>AT5G49180.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr5:19940783-19942876 REVERSE
LENGTH=571
Length = 571
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 63/108 (58%), Gaps = 11/108 (10%)
Query: 65 KVRITVSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYREKVMIPRTLPFITFLGDA 124
K + V+ DG+G +KTI EA+N++P N + ++ I GVY EKV + + + +TF+GD
Sbjct: 257 KANVVVAHDGSGQYKTINEALNAVPKANQKPFVIYIKQGVYNEKVDVTKKMTHVTFIGDG 316
Query: 125 LDPPTITGNDTASVTGSNGAPLG---TFRSATVAVDASYFIAINIKFE 169
PT T +TGS +G T+ +ATVA++ F A NI FE
Sbjct: 317 ---PTKT-----KITGSLNYYIGKVKTYLTATVAINGDNFTAKNIGFE 356
>AT1G23200.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr1:8227236-8229400 FORWARD
LENGTH=554
Length = 554
Score = 73.2 bits (178), Expect = 9e-14, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 63/107 (58%), Gaps = 8/107 (7%)
Query: 65 KVRITVSQDGAGDFKTITEAINSIP--PRNTRRVIVMIAPGVYREKVMIPRTLPFITFLG 122
K + V++DG+G + +I +A+N+ PR +R+++ + GVYRE V+I +++ + +G
Sbjct: 248 KADLVVAKDGSGHYTSIQQAVNAAAKLPRRNQRLVIYVKAGVYRENVVIKKSIKNVMVIG 307
Query: 123 DALDPPTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINIKFE 169
D +D +TGN G+ TFRSAT AV + FIA I FE
Sbjct: 308 DGIDSTIVTGNRNVQ-DGTT-----TFRSATFAVSGNGFIAQGITFE 348
>AT1G53830.1 | Symbols: ATPME2, PME2 | pectin methylesterase 2 |
chr1:20098562-20100745 FORWARD LENGTH=587
Length = 587
Score = 73.2 bits (178), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 7/122 (5%)
Query: 48 KWNLAAPDLKLRQAESDKVRITVSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYRE 107
KW L+ D +L Q + K TV+ DG+GDF T+ A+ + P ++ +R ++ I GVYRE
Sbjct: 258 KW-LSVGDRRLLQGSTIKADATVADDGSGDFTTVAAAVAAAPEKSNKRFVIHIKAGVYRE 316
Query: 108 KVMIPRTLPFITFLGDALDPPTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINIK 167
V + + I FLGD ITG+ V GS TF SATVA F+A +I
Sbjct: 317 NVEVTKKKTNIMFLGDGRGKTIITGSRNV-VDGST-----TFHSATVAAVGERFLARDIT 370
Query: 168 FE 169
F+
Sbjct: 371 FQ 372
>AT3G14310.1 | Symbols: ATPME3, PME3 | pectin methylesterase 3 |
chr3:4772214-4775095 REVERSE LENGTH=592
Length = 592
Score = 70.1 bits (170), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 63/119 (52%), Gaps = 6/119 (5%)
Query: 51 LAAPDLKLRQAESDKVRITVSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYREKVM 110
L+A D +L Q K TV+ DG+G FKT+ A+ + P + +R ++ I GVYRE V
Sbjct: 265 LSAGDRRLLQGSGVKADATVAADGSGTFKTVAAAVAAAPENSNKRYVIHIKAGVYRENVE 324
Query: 111 IPRTLPFITFLGDALDPPTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINIKFE 169
+ + I F+GD ITG+ V GS TF SATVA F+A +I F+
Sbjct: 325 VAKKKKNIMFMGDGRTRTIITGSRNV-VDGST-----TFHSATVAAVGERFLARDITFQ 377
>AT1G05310.1 | Symbols: | Pectin lyase-like superfamily protein |
chr1:1550615-1552434 REVERSE LENGTH=393
Length = 393
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 56/101 (55%), Gaps = 6/101 (5%)
Query: 68 ITVSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYREKVMIPRTLPFITFLGDALDP 127
+ V ++G +F T+ A++++ + RR ++ I G+Y EKV+IP+T P IT G D
Sbjct: 91 LCVDKNGCCNFTTVQSAVDAVGNFSQRRNVIWINSGMYYEKVVIPKTKPNITLQGQGFDI 150
Query: 128 PTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINIKF 168
I NDTA + GTF ATV V S F+A NI F
Sbjct: 151 TAIAWNDTAY------SANGTFYCATVQVFGSQFVAKNISF 185
>AT1G11580.1 | Symbols: ATPMEPCRA, PMEPCRA | methylesterase PCR A |
chr1:3888730-3890649 FORWARD LENGTH=557
Length = 557
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 51 LAAPDLKLRQAESDKVRIT----VSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYR 106
L A D KL ++ +++T V++DG G FKT+ EA+ + P + R ++ + GVY+
Sbjct: 226 LTALDRKLLESSPKTLKVTANVVVAKDGTGKFKTVNEAVAAAPENSNTRYVIYVKKGVYK 285
Query: 107 EKVMIPRTLPFITFLGDALDPPTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINI 166
E + I + + +GD D ITG+ + GS TFRSATVA + F+A +I
Sbjct: 286 ETIDIGKKKKNLMLVGDGKDATIITGSLNV-IDGST-----TFRSATVAANGDGFMAQDI 339
Query: 167 KFE 169
F+
Sbjct: 340 WFQ 342
>AT3G05620.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr3:1629658-1631766 REVERSE
LENGTH=543
Length = 543
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 56/99 (56%), Gaps = 6/99 (6%)
Query: 70 VSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYREKVMIPRTLPFITFLGDALDPPT 129
V+ DG G ++TI EAIN P +T+R ++ + GVY+E + + + I +GD +
Sbjct: 243 VAIDGKGKYRTINEAINEAPNHSTKRYVIYVKKGVYKENIDLKKKKTNIMLVGDGIGQTI 302
Query: 130 ITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINIKF 168
ITG D + G L TFR+ATVAV FIA +I F
Sbjct: 303 ITG-DRNFMQG-----LTTFRTATVAVSGRGFIAKDITF 335
>AT4G02330.1 | Symbols: ATPMEPCRB | Plant invertase/pectin
methylesterase inhibitor superfamily |
chr4:1032479-1034928 FORWARD LENGTH=573
Length = 573
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 9/105 (8%)
Query: 68 ITVSQDGAGDFKTITEAINSIPPR---NTRRVIVMIAPGVYREKVMIPRTLPFITFLGDA 124
+TV+Q+G G+F TITEA+NS P + ++ + GVY E V+I + ++ +GD
Sbjct: 259 VTVNQNGTGNFTTITEAVNSAPNKTDGTAGYFVIYVTSGVYEENVVIAKNKRYLMMIGDG 318
Query: 125 LDPPTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINIKFE 169
++ +TGN V G TF SAT AV + F+A+N+ F
Sbjct: 319 INRTVVTGNRNV-VDG-----WTTFNSATFAVTSPNFVAVNMTFR 357
>AT3G27980.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr3:10393904-10395861 FORWARD
LENGTH=497
Length = 497
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 9/114 (7%)
Query: 55 DLKLRQAESDKVRITVSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYREKVMIPRT 114
DL L +D + V++DG G + T+ AI + P + +R ++ I G+Y E V+I T
Sbjct: 179 DLYLNAEIAD---VVVAKDGTGKYSTVNAAIAAAPQHSQKRFVIYIKTGIYDEIVVIENT 235
Query: 115 LPFITFLGDALDPPTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINIKF 168
P +T +GD D ITGN +AS T+ +ATVA + + FI +++ F
Sbjct: 236 KPNLTLIGDGQDLTIITGNLSASNVRR------TYNTATVASNGNGFIGVDMCF 283
>AT5G09760.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr5:3032446-3034364 FORWARD
LENGTH=551
Length = 551
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 6/106 (5%)
Query: 65 KVRITVSQDGAGDFKTITEAINSIPPRN-TRRVIVMIAPGVYREKVMIPRTLPFITFLGD 123
K +TV +DG +KT+ +A+N+ P N R+ ++ I+ GVY E V++P + F+GD
Sbjct: 238 KEDVTVCKDGKCGYKTVQDAVNAAPEDNGMRKFVIKISEGVYEENVIVPFEKKNVVFIGD 297
Query: 124 ALDPPTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINIKFE 169
+ ITG+ A + G + T+ +ATV V F+A ++ F+
Sbjct: 298 GMGKTVITGSLNAGMPG-----ITTYNTATVGVVGDGFMARDLTFQ 338
>AT1G11370.1 | Symbols: | Pectin lyase-like superfamily protein |
chr1:3828098-3830945 REVERSE LENGTH=288
Length = 288
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 67/116 (57%), Gaps = 10/116 (8%)
Query: 51 LAAPDLKLRQAESDKVRITVSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYREKVM 110
++ PD QA DK + V++DG+G+F T+ EA+ + P + ++ I G+Y+E +
Sbjct: 33 ISTPD----QALKDKADLIVAKDGSGNFTTVNEAVAAAPENGVKPFVIYIKEGLYKEVIR 88
Query: 111 IPRTLPFITFLGDALDPPTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINI 166
I + +T +GD D ++G+ + G +G + TF SAT+AVD S F+A ++
Sbjct: 89 IGKKKTNLTLVGDGRDLTVLSGD----LNGVDG--IKTFDSATLAVDESGFMAQDL 138
>AT2G47040.1 | Symbols: VGD1 | Plant invertase/pectin methylesterase
inhibitor superfamily | chr2:19328186-19330060 REVERSE
LENGTH=595
Length = 595
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 65 KVRIT--VSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYREKVMIPRTLPFITFLG 122
++R T V++DG+G FKT+ +A+N+ P +N R I+ I G+YRE+V+IP+ I G
Sbjct: 279 RIRATFVVAKDGSGQFKTVQQAVNACPEKNPGRCIIHIKAGIYREQVIIPKKKNNIFMFG 338
Query: 123 DALDPPTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINIKFE 169
D I+ N + ++ L S TV V++ F+A I F+
Sbjct: 339 DGARKTVISYNRSVKLSPGTTTSL----SGTVQVESEGFMAKWIGFK 381
>AT3G43270.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr3:15222402-15225124 REVERSE
LENGTH=527
Length = 527
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 64/116 (55%), Gaps = 7/116 (6%)
Query: 55 DLKLRQAESDKVR-ITVSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYREKVMIPR 113
D KL Q ++ V V+ DG G+F TI++A+ + P +T+R ++ + GVY E V I +
Sbjct: 201 DRKLLQTDNITVADAVVAADGTGNFTTISDAVLAAPDYSTKRYVIHVKRGVYVENVEIKK 260
Query: 114 TLPFITFLGDALDPPTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINIKFE 169
I +GD +D ITGN + + G TFRSAT AV FIA +I F+
Sbjct: 261 KKWNIMMVGDGIDATVITGNRSF-IDG-----WTTFRSATFAVSGRGFIARDITFQ 310
>AT4G03930.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr4:1870422-1872387 FORWARD
LENGTH=524
Length = 524
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 6/101 (5%)
Query: 68 ITVSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYREKVMIPRTLPFITFLGDALDP 127
+ V++DG G + T+ AI + P + +R I+ I G+Y E V I T P +T +GD D
Sbjct: 216 VVVAKDGTGKYNTVNAAIAAAPQHSHKRFIIYIKTGIYDEIVAIENTKPNLTLIGDGQDS 275
Query: 128 PTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINIKF 168
ITGN +AS TF +AT A + FI +++ F
Sbjct: 276 TIITGNLSASNVRR------TFYTATFASNGKGFIGVDMCF 310
>AT4G02320.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr4:1022725-1026118 REVERSE
LENGTH=518
Length = 518
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 51 LAAPDLKLRQAESD--KVRITVSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYREK 108
++ D L Q D KV + V+Q+G G++ TI EAI++ P + R ++ I G Y E
Sbjct: 189 VSGSDRNLLQDPVDETKVNLVVAQNGTGNYTTIGEAISAAPNSSETRFVIYIKCGEYFEN 248
Query: 109 VMIPRTLPFITFLGDALDPPTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINIKF 168
+ IPR I F+GD + I N S F SATV V S FIA ++ F
Sbjct: 249 IEIPREKTMIMFIGDGIGRTVIKANR------SYADGWTAFHSATVGVRGSGFIAKDLSF 302
>AT1G11590.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr1:3892634-3894620 FORWARD
LENGTH=524
Length = 524
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 6/101 (5%)
Query: 68 ITVSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYREKVMIPRTLPFITFLGDALDP 127
+ V++DG G + T+ AI + P + +R ++ I G+Y E V+I T P +T +GD D
Sbjct: 216 VVVAKDGTGKYSTVNAAIAAAPQHSQKRFVIYIKTGIYDEIVVIENTKPNLTLIGDGQDL 275
Query: 128 PTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINIKF 168
IT N +AS TF +ATVA + + FI +++ F
Sbjct: 276 TIITSNLSASNVRR------TFNTATVASNGNGFIGVDMCF 310
>AT2G26440.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr2:11247407-11249407 FORWARD
LENGTH=547
Length = 547
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 68 ITVSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYREKVMIPRTLPFITFLGDALDP 127
+ V+ DG G+F TI EAI+ P + RV++ + GVY E + IP I +GD D
Sbjct: 238 LVVAADGTGNFSTINEAISFAPNMSNDRVLIYVKEGVYDENIDIPIYKTNIVLIGDGSDV 297
Query: 128 PTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINI 166
ITGN + G TFRSAT+AV F+A +I
Sbjct: 298 TFITGNRSV------GDGWTTFRSATLAVSGEGFLARDI 330
>AT2G47030.1 | Symbols: VGDH1 | Plant invertase/pectin
methylesterase inhibitor superfamily |
chr2:19324415-19326268 REVERSE LENGTH=588
Length = 588
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 65 KVRITVSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYREKVMIPRTLPFITFLGDA 124
+ V++DG+G FKT+ +A+++ P N R I+ I G+YRE+V+IP+ I GD
Sbjct: 274 RTNFVVAKDGSGQFKTVQQAVDACPENNRGRCIIYIKAGLYREQVIIPKKKNNIFMFGDG 333
Query: 125 LDPPTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIA 163
I+ N + +++ L SATV V++ F+A
Sbjct: 334 ARKTVISYNRSVALSRGTTTSL----SATVQVESEGFMA 368
>AT2G21610.1 | Symbols: PE11, ATPE11 | pectinesterase 11 |
chr2:9245161-9247025 REVERSE LENGTH=352
Length = 352
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 16/82 (19%)
Query: 66 VRITVSQDGAGDFKTITEAINSIPPR--NTRRVIVMIAPGVYREKVMIPRTLPFITFLG- 122
+ I V Q G GDF I EAI SIPP N++ + + PG+YREKV+IP P+IT G
Sbjct: 49 ILIRVDQSGKGDFSKIQEAIESIPPNLNNSQLYFIWVKPGIYREKVVIPAEKPYITLSGT 108
Query: 123 -------------DALDPPTIT 131
D L+ PT+T
Sbjct: 109 QASNTFLIWSDGEDILESPTLT 130
>AT4G33220.1 | Symbols: PME44, ATPME44 | pectin methylesterase 44 |
chr4:16022506-16026130 FORWARD LENGTH=525
Length = 525
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 55 DLKLRQAESDKVRITVSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYREKVMIPRT 114
D KL ++ ++V+ DG G+F I +AI P ++ R ++ I G+Y E V I +
Sbjct: 200 DRKLLESNGRTYDVSVALDGTGNFTKIMDAIKKAPDYSSTRFVIYIKKGLYLENVEIKKK 259
Query: 115 LPFITFLGDALDPPTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINIKFE 169
I LGD +D I+GN + + G TFRSAT AV F+A +I F+
Sbjct: 260 KWNIVMLGDGIDVTVISGN-RSFIDG-----WTTFRSATFAVSGRGFLARDITFQ 308
>AT5G53370.1 | Symbols: ATPMEPCRF, PMEPCRF | pectin methylesterase
PCR fragment F | chr5:21649683-21651530 REVERSE
LENGTH=587
Length = 587
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 68 ITVSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYREK-VMIPRTLPFITFLGDALD 126
ITVS+DG+G FKTI EAI P ++RR ++ + G Y E+ + + R + F+GD
Sbjct: 274 ITVSKDGSGTFKTIAEAIKKAPEHSSRRFVIYVKAGRYEEENLKVGRKKTNLMFIGDGKG 333
Query: 127 PPTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINIKFE 169
ITG + + L TF +AT A + FI ++ FE
Sbjct: 334 KTVITGGKSIA------DDLTTFHTATFAATGAGFIVRDMTFE 370
>AT4G33230.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr4:16026591-16028754 REVERSE
LENGTH=609
Length = 609
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 69 TVSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYREKVMIPRTLPFITFLGDALDPP 128
TV++DG+G+F TI A+ ++P + R + I G+Y E V+I + P +T +GD
Sbjct: 298 TVAKDGSGNFTTINAALKAMPAKYQGRYTIYIKHGIYDESVIIDKKKPNVTMVGDGSQKT 357
Query: 129 TITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINIKF 168
+TGN S+ + TF +AT F+A ++ F
Sbjct: 358 IVTGNK------SHAKKIRTFLTATFVAQGEGFMAQSMGF 391
>AT1G02810.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr1:618284-620333 FORWARD
LENGTH=579
Length = 579
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 11/106 (10%)
Query: 68 ITVSQDGAGDFKTITEAINSIPPRNTRR----VIVMIAPGVYREKVMIPRTLPFITFLGD 123
+TVSQDG G+F IT A+ + P NT ++ + G+Y E + I + ++ +GD
Sbjct: 265 VTVSQDGTGNFTNITAAV-AAAPNNTDGSAGFFLIYVTAGIYEEYISIAKNKRYMMMIGD 323
Query: 124 ALDPPTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINIKFE 169
++ +TGN + V G TF SAT AV A F+A+NI F
Sbjct: 324 GINQTVVTGNRSV-VDG-----WTTFNSATFAVTAPNFVAVNITFR 363
>AT5G18990.1 | Symbols: | Pectin lyase-like superfamily protein |
chr5:6340076-6341614 FORWARD LENGTH=330
Length = 330
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%)
Query: 62 ESDKVRITVSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYREKVMIPRTLPFITFL 121
E+ + V Q G G+F TI +AI+S+P NT + + G+YREK+ IP+ PFI +
Sbjct: 23 EAKPFEVIVDQSGHGNFTTIQKAIDSVPINNTHWFFINVKAGLYREKITIPQKKPFIVIV 82
Query: 122 GDALDPPTITGNDTASVTGS 141
G + +D AS+ S
Sbjct: 83 GAGKRSTRVEWDDHASLAQS 102
>AT3G62170.1 | Symbols: VGDH2 | VANGUARD 1 homolog 2 |
chr3:23016495-23018337 REVERSE LENGTH=588
Length = 588
Score = 60.1 bits (144), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 70 VSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYREKVMIPRTLPFITFLGDALDPPT 129
V++DG+G FKTI+EA+ + P +N R I+ I G+Y E+V IP+ I GD
Sbjct: 279 VAKDGSGQFKTISEAVMACPDKNPGRCIIHIKAGIYNEQVRIPKKKNNIFMFGDGATQTI 338
Query: 130 ITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINIKFE 169
IT + + ++ L S TV V++ F+A I F+
Sbjct: 339 ITFDRSVKLSPGTTTSL----SGTVQVESEGFMAKWIGFK 374
>AT2G26450.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr2:11251279-11253446 FORWARD
LENGTH=614
Length = 614
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 69 TVSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYREKVMIPRTLPFITFLGDALDPP 128
TV++DG+GDF TI +A+ ++P + R I+ + G+Y E V + + +T +GD
Sbjct: 303 TVAKDGSGDFTTINDALRAMPEKYEGRYIIYVKQGIYDEYVTVDKKKANLTMVGDGSQKT 362
Query: 129 TITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINIKF 168
+TGN S+ + TF +AT F+A ++ F
Sbjct: 363 IVTGNK------SHAKKIRTFLTATFVAQGEGFMAQSMGF 396
>AT4G00190.1 | Symbols: PME38, ATPME38 | pectin methylesterase 38 |
chr4:80433-82040 REVERSE LENGTH=474
Length = 474
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 64 DKVRITVSQDGAGDFKTITEAINSIPPR--NTRRVIVMIAPGVYREKVMIPRTLPFITFL 121
+KV + V+QDG+GD+KTI EA+N R + R ++ + GVY E V + I
Sbjct: 161 EKVDVVVAQDGSGDYKTIQEAVNGAGERLKGSPRYVIHVKQGVYEEYVNVGIKSNNIMIT 220
Query: 122 GDALDPPTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINI 166
GD + ITG+ S G T++SAT + F+ +I
Sbjct: 221 GDGIGKTIITGDK------SKGRGFSTYKSATFVAEGDGFVGRDI 259
>AT3G17060.1 | Symbols: | Pectin lyase-like superfamily protein |
chr3:5816953-5818458 REVERSE LENGTH=344
Length = 344
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 68 ITVSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYREKVMIPRTLPFITFLGDALDP 127
I V +G GD+ ++ +AI+++P N+ +IV + G+Y+E+V IP PFI G+
Sbjct: 46 IIVDIEGKGDYTSVQKAIDAVPVGNSNWIIVHVRKGIYKERVHIPENKPFIFMRGNGKGK 105
Query: 128 PTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINI 166
I S+ + + SAT V+A++F+A I
Sbjct: 106 TVIE---------SSQSSVDNVASATFKVEANHFVAFGI 135
>AT2G45220.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr2:18644281-18646394 REVERSE
LENGTH=511
Length = 511
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 55 DLKLRQAESDKVRITVSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYREKVMIPRT 114
D KL Q+ + K V++DG+G+FKTI EAI++ + R ++ + GVY E + I +
Sbjct: 194 DRKLLQSSTPKDNAVVAKDGSGNFKTIKEAIDA--ASGSGRFVIYVKQGVYSENLEIRK- 250
Query: 115 LPFITFLGDALDPPTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINIKFE 169
+ GD + ITG+ + G TF SATVA FIA I F
Sbjct: 251 -KNVMLRGDGIGKTIITGSKSV------GGGTTTFNSATVAAVGDGFIARGITFR 298
>AT3G49220.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr3:18249840-18253647 FORWARD
LENGTH=598
Length = 598
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 55 DLKLRQAESDKVRITVSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYRE-KVMIPR 113
++ + Q ++D I VS+DG G KTI+EAI P +TRR+I+ + G Y E + + R
Sbjct: 275 EMPVSQIQAD---IIVSKDGNGTCKTISEAIKKAPQNSTRRIIIYVKAGRYEENNLKVGR 331
Query: 114 TLPFITFLGDALDPPTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINIKFE 169
+ F+GD I+G + + TF +A+ A + FIA +I FE
Sbjct: 332 KKINLMFVGDGKGKTVISGGKSIFDN------ITTFHTASFAATGAGFIARDITFE 381
>AT5G64640.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr5:25836820-25839053 FORWARD
LENGTH=602
Length = 602
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 8/105 (7%)
Query: 68 ITVSQDGAGD--FKTITEAINSIPPRN-TRRVIVMIAPGVYREKVMIPRTLPFITFLGDA 124
+TV ++G D +KT+ EA++S P N T + ++ I GVY E V +P + F+GD
Sbjct: 289 VTVCKNGGKDCKYKTVQEAVDSAPDTNRTVKFVIRIREGVYEETVRVPFEKKNVVFIGDG 348
Query: 125 LDPPTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINIKFE 169
+ ITG+ G + TF SATV V F+A ++ E
Sbjct: 349 MGKTVITGSLNVGQPG-----MTTFESATVGVLGDGFMARDLTIE 388
>AT4G02300.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr4:1009366-1013034 REVERSE
LENGTH=532
Length = 532
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 51 LAAPDLKLRQA--ESDKVRITVSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYREK 108
L+ D +L +A + ++V+ DG G+F TI +A+ + P + R I+ I G Y E
Sbjct: 203 LSENDQRLLEAPVQETNYNLSVAIDGTGNFTTINDAVFAAPNMSETRFIIYIKGGEYFEN 262
Query: 109 VMIPRTLPFITFLGDALDPPTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINIKF 168
V +P+ I F+GD + I N + + G TF++ TV V +IA +I F
Sbjct: 263 VELPKKKTMIMFIGDGIGKTVIKAN-RSRIDG-----WSTFQTPTVGVKGKGYIAKDISF 316
>AT3G10710.1 | Symbols: RHS12 | root hair specific 12 |
chr3:3352289-3354237 FORWARD LENGTH=561
Length = 561
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 6/101 (5%)
Query: 68 ITVSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYREKVMIPRTLPFITFLGDALDP 127
I V++DG+G ++TI A+ +P ++ +R I+ + GVY E V + + + + +GD
Sbjct: 256 IVVAKDGSGKYRTIKRALQDVPEKSEKRTIIYVKKGVYFENVKVEKKMWNVIVVGDGESK 315
Query: 128 PTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINIKF 168
++G + +G P TF++AT AV F+A ++ F
Sbjct: 316 SIVSGR----LNVIDGTP--TFKTATFAVFGKGFMARDMGF 350
>AT5G04960.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr5:1461985-1463809 FORWARD
LENGTH=564
Length = 564
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 12/118 (10%)
Query: 51 LAAPDLKLRQAESDKVRITVSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYREKVM 110
L + DLK K I V++DG+G ++TI EA+ + +N + I+ + GVY E V
Sbjct: 247 LESGDLK------KKATIVVAKDGSGKYRTIGEALAEVEEKNEKPTIIYVKKGVYLENVR 300
Query: 111 IPRTLPFITFLGDALDPPTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINIKF 168
+ +T + +GD + +A + +G P TF +AT AV F+A ++ F
Sbjct: 301 VEKTKWNVVMVGDGQSKTIV----SAGLNFIDGTP--TFETATFAVFGKGFMARDMGF 352
>AT2G47550.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr2:19509024-19511604 FORWARD
LENGTH=560
Length = 560
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 57 KLRQAESDKVRI----TVSQDGAGDFKTITEAINSIPPR---NTRRVIVMIAPGVYREKV 109
KL Q+++D V++ TV Q+G G+F TI AI + P + + ++ + G+Y E V
Sbjct: 231 KLLQSDADAVQVSDIVTVIQNGTGNFTTINAAIAAAPNKTDGSNGYFLIYVTAGLYEEYV 290
Query: 110 MIPRTLPFITFLGDALDPPTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINI 166
+P+ ++ +GD ++ ITGN + V G TF SAT + FI +NI
Sbjct: 291 EVPKNKRYVMMIGDGINQTVITGNRSV-VDG-----WTTFNSATFILSGPNFIGVNI 341
>AT5G51500.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr5:20917929-20919838 REVERSE
LENGTH=540
Length = 540
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 8/117 (6%)
Query: 55 DLKLRQAESDKVRITVSQDGAGDFKTITEAINSIPPRN--TRRVIVMIAPGVYREKVMIP 112
+ +L Q +S + + V++DG+G FKT+ AI+ R + R ++ + G+Y+E + +
Sbjct: 213 ERRLLQLQSVRANLVVAKDGSGHFKTVQAAIDVAGRRKVTSGRFVIYVKRGIYQENLNVR 272
Query: 113 RTLPFITFLGDALDPPTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINIKFE 169
I +GD + ITG SV G T+ SAT ++ +FIA I F+
Sbjct: 273 LNNDNIMLVGDGMRYTIITGGR--SVKGG----YTTYSSATAGIEGLHFIAKGIAFQ 323
>AT2G47280.1 | Symbols: | Pectin lyase-like superfamily protein |
chr2:19416800-19418252 FORWARD LENGTH=336
Length = 336
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%)
Query: 61 AESDKVRITVSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYREKVMIPRTLPFITF 120
AE ITV +G G+F T+ AI+SI P N + V G+YREKV IP+ FI
Sbjct: 28 AEQIAYTITVDLNGGGNFTTVQSAIDSISPPNHNWIRVFTQNGIYREKVTIPKEKGFIYL 87
Query: 121 LGDALDPPTITGND 134
G ++ I +D
Sbjct: 88 QGKGIEQTVIEYDD 101
>AT3G24130.1 | Symbols: | Pectin lyase-like superfamily protein |
chr3:8711663-8713361 REVERSE LENGTH=335
Length = 335
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%)
Query: 67 RITVSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYREKVMIPRTLPFITFLGDALD 126
++ V Q G G+F TI +AI+S+P N + + G+YREK+ IP PFI +G
Sbjct: 33 QVFVDQSGHGNFTTIQKAIDSVPINNRHWFFINVKAGLYREKIKIPYEKPFIVLVGAGKR 92
Query: 127 PPTITGNDTASVTGS 141
+ +D SV S
Sbjct: 93 LTRVEWDDHYSVAQS 107
>AT1G53840.1 | Symbols: ATPME1, PME1 | pectin methylesterase 1 |
chr1:20101533-20103458 FORWARD LENGTH=586
Length = 586
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 10/130 (7%)
Query: 37 SYHQKKTVLGTKWNLAAPDLKLRQAESDKVRITVSQDGAGDFKTITEAINSIPPRNTRRV 96
S+H +++V KW +L Q K +TV+ DG GD T+ EA+ +P ++ +
Sbjct: 254 SHHHQQSVDFEKW----ARRRLLQTAGLKPDVTVAGDGTGDVLTVNEAVAKVPKKSLKMF 309
Query: 97 IVMIAPGVYREKVMIPRTLPFITFLGDALDPPTITGNDTASVTGSNGAPLGTFRSATVAV 156
++ + G Y E V++ ++ + GD I+G S +G P T+ +AT A+
Sbjct: 310 VIYVKSGTYVENVVMDKSKWNVMIYGDGKGKTIISG----SKNFVDGTP--TYETATFAI 363
Query: 157 DASYFIAINI 166
FI +I
Sbjct: 364 QGKGFIMKDI 373
>AT2G36710.1 | Symbols: | Pectin lyase-like superfamily protein |
chr2:15389614-15391200 REVERSE LENGTH=407
Length = 407
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 6/113 (5%)
Query: 57 KLRQAESDKVRITVSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYREKVMIPRTLP 116
+LR + +TV G G+F + AI+ +P ++ + ++++ G YREKV +
Sbjct: 80 RLRHQYKTSLVLTVDLHGCGNFSNVQSAIDVVPDLSSSKTLIIVNSGSYREKVTVNENKT 139
Query: 117 FITFLGDALDPPTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINIKFE 169
+ G +I NDTA G+ T S + V A+ F A NI F+
Sbjct: 140 NLVIQGRGYQNTSIEWNDTAKSAGN------TADSFSFVVFAANFTAYNISFK 186
>AT3G60730.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr3:22444955-22447226 FORWARD
LENGTH=519
Length = 519
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 13/112 (11%)
Query: 63 SDKVRITVSQDGAGDFKTITEAINSIP---PRNTRRVIVMIAPGVYREKVMIPRTLPFIT 119
S + V++DG+ +TI +A+ ++ RVI+ I GVY EK+ I R + I
Sbjct: 201 SSRADFVVARDGSATHRTINQALAAVSRMGKSRLNRVIIYIKAGVYNEKIEIDRHMKNIM 260
Query: 120 FLGDALDPPTITGNDTASVTGSNGAPLG--TFRSATVAVDASYFIAINIKFE 169
+GD +D +T N P G T+ SAT V F A +I FE
Sbjct: 261 LVGDGMDRTIVTNN--------RNVPDGSTTYGSATFGVSGDGFWARDITFE 304
>AT3G59010.1 | Symbols: PME61 | pectin methylesterase 61 |
chr3:21803015-21805098 REVERSE LENGTH=529
Length = 529
Score = 51.6 bits (122), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 9/120 (7%)
Query: 51 LAAPDLKLRQAESDKVR--ITVSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYREK 108
+++ D KL +A +++R V+ DG+G ++ EA+ S+ + R VI + A G Y+E
Sbjct: 210 VSSSDRKLLEASVEELRPHAVVAADGSGTHMSVAEALASLEKGSGRSVIHLTA-GTYKEN 268
Query: 109 VMIPRTLPFITFLGDALDPPTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINIKF 168
+ IP + +GD I G + SN T++SATVA FIA +I F
Sbjct: 269 LNIPSKQKNVMLVGDGKGKTVIVG------SRSNRGGWNTYQSATVAAMGDGFIARDITF 322
>AT5G51490.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr5:20913680-20915606 REVERSE
LENGTH=536
Length = 536
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 10/121 (8%)
Query: 51 LAAPDLKLRQAESDKVRITVSQDGAGDFKTITEAINSIPPRN--TRRVIVMIAPGVYREK 108
L+ D +L +A + + V++DG+G F T+ AI+ R + R ++ + G+Y+E
Sbjct: 207 LSRKDKRLLRAV--RANLVVAKDGSGHFNTVQAAIDVAGRRKVTSGRFVIYVKRGIYQEN 264
Query: 109 VMIPRTLPFITFLGDALDPPTITGNDTASVTGSNGAPLGTFRSATVAVDASYFIAINIKF 168
+ + I +GD + ITG SV G T+ SAT ++ +FIA I F
Sbjct: 265 INVRLNNDDIMLVGDGMRSTIITGGR--SVQGG----YTTYNSATAGIEGLHFIAKGITF 318
Query: 169 E 169
Sbjct: 319 R 319
>AT3G14300.1 | Symbols: ATPMEPCRC, ATPME26, PME26 | pectinesterase
family protein | chr3:4766905-4769898 REVERSE LENGTH=968
Length = 968
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 57 KLRQAESDKVRITVSQDGAGDFKTITEAINSIPPRNTRRVIVMIAPGVYREKVMIPRTLP 116
+L QA++ +TV+ DG+GD +T+ EA+ +P + ++ + G Y E V++ +
Sbjct: 650 RLLQAKNLTPHVTVAADGSGDVRTVNEAVWRVPKKGKTMFVIYVKAGTYVENVLMKKDKW 709
Query: 117 FITFLGDALDPPTITGNDTASVTGSNGAPLGTFRSATVAVDASYFI 162
+ GD D I+G+ T V G + TF ++T A + F+
Sbjct: 710 NVFIYGDGRDKTIISGS-TNMVDG-----VRTFNTSTFATEGKGFM 749