Miyakogusa Predicted Gene
- Lj5g3v1552110.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1552110.1 tr|D7LSX2|D7LSX2_ARALL Pentatricopeptide
repeat-containing protein OS=Arabidopsis lyrata subsp.
lyra,26.59,1e-16,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; SUBFAMILY NOT NAMED,NULL; FAMILY NOT N,CUFF.55524.1
(501 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 633 0.0
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 9e-55
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 4e-54
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 6e-53
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 8e-50
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 4e-48
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 181 1e-45
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 3e-44
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 4e-44
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 6e-44
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 168 9e-42
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 168 1e-41
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 2e-40
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 2e-39
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 2e-39
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 3e-39
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 2e-37
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 4e-37
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 149 6e-36
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 8e-36
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 8e-36
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 1e-35
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 1e-35
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 3e-35
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 145 4e-35
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 8e-35
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 8e-35
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 2e-34
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 142 6e-34
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 142 6e-34
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 7e-34
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 141 9e-34
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 1e-33
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 140 2e-33
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 140 2e-33
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 140 2e-33
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 5e-33
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 137 1e-32
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 3e-32
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 5e-32
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 6e-32
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 8e-32
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 5e-31
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 5e-31
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 131 1e-30
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 3e-30
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 129 7e-30
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 7e-30
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 128 9e-30
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 126 3e-29
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 126 4e-29
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 126 4e-29
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 6e-29
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 125 6e-29
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 7e-29
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 123 4e-28
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 4e-28
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 5e-28
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 5e-28
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 5e-28
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 5e-28
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 6e-28
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 7e-28
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 8e-28
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 1e-27
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 1e-27
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 119 4e-27
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 119 7e-27
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 7e-27
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 118 1e-26
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 3e-26
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 4e-26
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 4e-26
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 4e-26
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 116 4e-26
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 5e-26
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 6e-26
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 6e-26
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 7e-26
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 9e-26
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 9e-26
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 114 2e-25
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 113 3e-25
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 5e-25
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 112 5e-25
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 6e-25
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 7e-25
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 7e-25
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 7e-25
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 7e-25
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 9e-25
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 111 1e-24
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 5e-24
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 5e-24
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 5e-24
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 5e-24
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 6e-24
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 6e-24
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 9e-24
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 1e-23
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 1e-23
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 1e-23
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 107 2e-23
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 4e-23
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 5e-23
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 5e-23
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 7e-23
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 8e-23
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 103 2e-22
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 4e-22
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 7e-22
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 9e-22
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 4e-21
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 5e-21
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 6e-21
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 6e-21
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 8e-21
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 99 9e-21
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 2e-20
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 97 4e-20
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 95 1e-19
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 6e-19
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 8e-19
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 92 1e-18
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 90 4e-18
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 90 4e-18
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 5e-18
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 5e-18
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 86 5e-17
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 86 5e-17
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 86 7e-17
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 85 1e-16
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 8e-16
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 3e-15
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 80 4e-15
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 5e-15
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 79 9e-15
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 75 8e-14
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 75 9e-14
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 74 2e-13
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 74 2e-13
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 74 2e-13
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 69 9e-12
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-11
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 9e-11
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 64 2e-10
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 63 6e-10
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-09
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-09
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 60 3e-09
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 60 3e-09
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 59 8e-09
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 59 8e-09
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 59 8e-09
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 59 1e-08
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 59 1e-08
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 58 2e-08
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 58 2e-08
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 57 3e-08
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 57 4e-08
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 57 4e-08
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 5e-08
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 56 7e-08
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 55 1e-07
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 55 2e-07
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 55 2e-07
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 54 2e-07
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 9e-07
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 52 1e-06
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 50 3e-06
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 50 4e-06
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 633 bits (1632), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/491 (65%), Positives = 395/491 (80%), Gaps = 14/491 (2%)
Query: 1 MLLKRCTFQSQSTFLPAPNLILSRLLSSTLNDG---------DVHRVMTIITTTSSPENL 51
M+LK + S F L +S L S L+D D V +I ++ L
Sbjct: 3 MILKPLSSHHVSNF----RLSVSFLHSVALSDAKVPVEEEGDDAETVFRMINGSNLQVEL 58
Query: 52 RQSLKSSGVFLSNELIDQVLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYIL 111
++SL SSG+ LS +LID+VLKRVRFSH NP QTLEFYRY +GF+H++FSLDTMLYIL
Sbjct: 59 KESLSSSGIHLSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLYIL 118
Query: 112 GRSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDF- 170
GR+R F+ IW+LLIE + KD++LI+PRT+ VVL R AK+CSVRQTVE F +FK+LVPDF
Sbjct: 119 GRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKRLVPDFF 178
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKTPEDAEVFFKKMR 230
DT CFNALLRTLCQEKSMTDARNVYHSLKHQF+P+LQTFNILLSGWK+ E+AE FF++M+
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSSEEAEAFFEEMK 238
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
G+ PDVVTYNSL+DVYCK RE+EKAYK++D+MRE + +PDVITYT++IGGLGL+GQPD
Sbjct: 239 GKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPD 298
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
KAR+VLKEMKEYGCYPDV AYNAAIRNFCIA+RL +A LVDEM KGL+PNATTYNLFF
Sbjct: 299 KAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFF 358
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG 410
R+ +NDL SW +Y RM+G C PNTQSCMFLI++FK+ EKV+MA++LW DMV KGFG
Sbjct: 359 RVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFG 418
Query: 411 SYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEALQNL 470
SY+LVSDVL DLLCD+ K+ EAEKC LEM+EKG +PSNVSF+RIK+LMELAN+H+ + NL
Sbjct: 419 SYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKHDEVNNL 478
Query: 471 TQKMAVFGRPV 481
QKMA+F +
Sbjct: 479 IQKMAIFSTEI 489
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 211 bits (537), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 132/454 (29%), Positives = 240/454 (52%), Gaps = 19/454 (4%)
Query: 29 TLNDG--DVHRVMTIIT--TTSSPENLRQSLKSSGVFLSNELIDQVLKRVRFSHANPSQT 84
+ ND D R+ I+T T S E L L + V LS LI++VLK++ S+A
Sbjct: 58 SANDASQDAERICKILTKFTDSKVETL---LNEASVKLSPALIEEVLKKL--SNAG-VLA 111
Query: 85 LEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVL 144
L +++ +KGF HT + + ++ LG+ + F IW L+ + + K L++ T ++
Sbjct: 112 LSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAK--KLLSKETFALIS 169
Query: 145 ARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FR 203
R A+ V++ + F + ++ +++ FN +L TL + +++ DA+ V+ +K + F
Sbjct: 170 RRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFE 229
Query: 204 PNLQTFNILLSGWKTPED---AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKV 260
P+++++ ILL GW + + ++M++ G PDVV Y +++ +CK ++ E+A +
Sbjct: 230 PDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRF 289
Query: 261 LDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCI 320
+EM +R+ P + S+I GLG + + A + + K G + P YNA + +C
Sbjct: 290 FNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCW 349
Query: 321 AKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQS 380
++R+ +AY VDEM KG+ PNA TY++ I + +Q S Y + C P +
Sbjct: 350 SQRMEDAYKTVDEMRLKGVGPNARTYDI---ILHHLIRMQRSKEAYEVYQTMSCEPTVST 406
Query: 381 CMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMI 440
++R+F +E+++MA+++W +M KG + L LC KL EA + F EM+
Sbjct: 407 YEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEML 466
Query: 441 EKGQKPSNVSFRRIKVLMELANRHEALQNLTQKM 474
+ G +P F R+K + R + + +L KM
Sbjct: 467 DVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKM 500
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 209 bits (531), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 128/429 (29%), Positives = 226/429 (52%), Gaps = 14/429 (3%)
Query: 26 LSSTLNDGDVHRVMTIITTTSSP-ENLRQSLKSSGVFLSNELIDQVLKRVRFSHANPSQT 84
+S L DV ++ ++ S + LR L+ V SNEL+ ++L RVR N +T
Sbjct: 88 ISDELVSEDVGKISKLVKDCGSDRKELRNKLEECDVKPSNELVVEILSRVR----NDWET 143
Query: 85 -LEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVV 143
F+ + G+++G+ + +M+ ILG+ R F+ W L+ E R +L+ +T++++
Sbjct: 144 AFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIM 203
Query: 144 LARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFR 203
+ + V V + + F +K+ + + F +LL LC+ K+++DA ++ K ++
Sbjct: 204 IRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYP 263
Query: 204 PNLQTFNILLSGW----KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYK 259
+ ++FNI+L+GW +P +AE + +M +GV DVV+Y+S++ Y KG L K K
Sbjct: 264 FDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLK 323
Query: 260 VLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEM-KEYGCYPDVPAYNAAIRNF 318
+ D M++ + PD Y +++ L +AR+++K M +E G P+V YN+ I+
Sbjct: 324 LFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPL 383
Query: 319 CIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNT 378
C A++ EA + DEM KGL P TY+ F RI ++ + + +M +GC P
Sbjct: 384 CKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEV---FELLAKMRKMGCEPTV 440
Query: 379 QSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLE 438
++ + LIR + + L LW +M EK G V+ L GK+ EA + E
Sbjct: 441 ETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKE 500
Query: 439 MIEKGQKPS 447
M +KG +P+
Sbjct: 501 MKDKGMRPN 509
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 205 bits (521), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 133/473 (28%), Positives = 246/473 (52%), Gaps = 13/473 (2%)
Query: 11 QSTFLPAPNLILSRLLSSTLNDGDVHRVMTIITTT--SSPE-NLRQSLKSSGVFLSNELI 67
QS F + + +RL SS+ DV V I+ SSP+ L +L SG+ +S E++
Sbjct: 45 QSRFC-CKSFLSARLYSSSEQVRDVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVV 103
Query: 68 DQVLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEA 127
+ VL R R + T F++++ +++ + H+ + M+ + R + +WDL+
Sbjct: 104 EDVLNRFRNAGL---LTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAM 160
Query: 128 RWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKS 187
R K ++ T +V+ + A+ V + + F +K + FN LL LC+ K+
Sbjct: 161 RKK--KMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKN 218
Query: 188 MTDARNVYHSLKHQFRPNLQTFNILLSGW-KTPE--DAEVFFKKMREMGVTPDVVTYNSL 244
+ A+ V+ +++ +F P+ +T++ILL GW K P A F++M + G PD+VTY+ +
Sbjct: 219 VRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIM 278
Query: 245 VDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGC 304
VD+ CK +++A ++ M P Y+ ++ G + ++A D EM+ G
Sbjct: 279 VDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGM 338
Query: 305 YPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWN 364
DV +N+ I FC A R++ Y ++ EM SKG+ PN+ + N+ R + +++
Sbjct: 339 KADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFD 398
Query: 365 MYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLC 424
++ +M+ + C P+ + +I++F +++++E A ++W M +KG VL + LC
Sbjct: 399 VFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLC 457
Query: 425 DMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEALQNLTQKMAVF 477
+ +A EMIE G +PS V+F R++ L+ R + L+ L +KM V
Sbjct: 458 EERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNEKMNVL 510
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 120/408 (29%), Positives = 211/408 (51%), Gaps = 7/408 (1%)
Query: 62 LSNELIDQVLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIW 121
LS E + +VL R+ +H+N + LEF++Y+ + T+ S + L+IL R R F+ W
Sbjct: 64 LSPEFVSEVLGRLFAAHSNGLKALEFFKYSLKSSKSSPTSDSFEKTLHILARMRYFDQAW 123
Query: 122 DLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLV--PDFDTNCFNALL 179
L+ E R L++ +++ ++L + AK S +T+E F + +K + F + FN LL
Sbjct: 124 ALMAEVRKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILL 183
Query: 180 RTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKTPEDA---EVFFKKMREMGVTP 236
R C E+ M +AR+++ L +F P+++T NILL G+K D E+F+ +M + G P
Sbjct: 184 RAFCTEREMKEARSIFEKLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKP 243
Query: 237 DVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVL 296
+ VTY +D +CK R +A ++ ++M D V T++I G G+ KAR +
Sbjct: 244 NSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLF 303
Query: 297 KEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWS 356
E+ + G PD AYNA + + + A ++ EM KG+ P++ T++ F S
Sbjct: 304 DEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKS 363
Query: 357 ND--LQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTL 414
+ Y +M P T + + L++LF +V + L LW M+EKG+ +
Sbjct: 364 KEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGH 423
Query: 415 VSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELAN 462
++L LC + +A +C + +E+G+ S +R ++ + N
Sbjct: 424 ALELLTTALCARRRANDAFECSWQTVERGRCVSEPVYRMLETSLSSNN 471
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 200/417 (47%), Gaps = 10/417 (2%)
Query: 33 GDVHRVMTIITTTSS-PENLRQSLKSSGVFLSNELIDQVLKRVRFSHANPSQTLEFYRYT 91
G+V ++ I+ S L +L SG+ L LI +VL R + + F+ +
Sbjct: 65 GEVEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDA---GNLGYRFFLWA 121
Query: 92 GRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVC 151
++ G+FH+ +M+ IL + R F +W L+ E R + LI P +V++ R A
Sbjct: 122 TKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASAN 181
Query: 152 SVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNI 211
V++ VE K + D F LL LC+ S+ +A V+ ++ +F PNL+ F
Sbjct: 182 MVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTS 241
Query: 212 LLSGW----KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRER 267
LL GW K E EV +M+E G+ PD+V + +L+ Y ++ AY ++++MR+R
Sbjct: 242 LLYGWCREGKLMEAKEVLV-QMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKR 300
Query: 268 DLSPDVITYTSIIGGLGLVGQP-DKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLRE 326
P+V YT +I L + D+A V EM+ YGC D+ Y A I FC + +
Sbjct: 301 GFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDK 360
Query: 327 AYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIR 386
Y ++D+M KG+ P+ TY + + +M GCHP+ +IR
Sbjct: 361 GYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIR 420
Query: 387 LFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKG 443
L K +V+ A++LW +M G ++ + G L EA F EM+ +G
Sbjct: 421 LACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRG 477
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 186/368 (50%), Gaps = 14/368 (3%)
Query: 46 SSPENLRQS----LKSSGVFLSNELIDQVLKRVRFSHANPSQTLEFYRY-TGRRKGFFHT 100
SSP Q L + + L++ VLKR+ ++H + L+F+ + + + H
Sbjct: 34 SSPNTTHQDDQFLLSTKTTPWTPNLVNSVLKRL-WNHG--PKALQFFHFLDNHHREYVHD 90
Query: 101 AFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFF 160
A S D + I R + +W L+ R + +P+T +V R A + V+ F
Sbjct: 91 ASSFDLAIDIAARLHLHPTVWSLIHRMR-SLRIGPSPKTFAIVAERYASAGKPDKAVKLF 149
Query: 161 RRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGW---- 216
+ D FN +L LC+ K + A ++ +L+ +F + T+N++L+GW
Sbjct: 150 LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIK 209
Query: 217 KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITY 276
+TP+ EV K+M E G+ P++ TYN+++ + + ++ A++ EM++RD DV+TY
Sbjct: 210 RTPKALEVL-KEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTY 268
Query: 277 TSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTS 336
T+++ G G+ G+ +AR+V EM G P V YNA I+ C + A + +EM
Sbjct: 269 TTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVR 328
Query: 337 KGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEM 396
+G PN TTYN+ R + + + + RM GC PN Q+ +IR + + +VE
Sbjct: 329 RGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEK 388
Query: 397 ALQLWGDM 404
AL L+ M
Sbjct: 389 ALGLFEKM 396
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 134/259 (51%), Gaps = 9/259 (3%)
Query: 197 SLKHQFR-----PNLQTFNILLSGWKT---PEDAEVFFKKMREMGVTPDVVTYNSLVDVY 248
SL H+ R P+ +TF I+ + + P+ A F M E G D+ ++N+++DV
Sbjct: 112 SLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVL 171
Query: 249 CKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDV 308
CK + +EKAY++ +R R S D +TY I+ G L+ + KA +VLKEM E G P++
Sbjct: 172 CKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNL 230
Query: 309 PAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHR 368
YN ++ F A ++R A++ EM + + TY F + +++ + N++
Sbjct: 231 TTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDE 290
Query: 369 MMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGK 428
M+ G P+ + +I++ K++ VE A+ ++ +MV +G+ +VL L G+
Sbjct: 291 MIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGE 350
Query: 429 LGEAEKCFLEMIEKGQKPS 447
E+ M +G +P+
Sbjct: 351 FSRGEELMQRMENEGCEPN 369
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/442 (25%), Positives = 227/442 (51%), Gaps = 18/442 (4%)
Query: 28 STLNDGDVHRVMTIITTTS--SPENLRQSLKSSGVFLSNELIDQVLKRVRFSHANPSQTL 85
+T++ D+ + ++ T +L +L +G+ S EL+ + R+ ++P
Sbjct: 63 NTVSKTDLSTISNLLENTDVVPGSSLESALDETGIEPSVELVHALFDRL---SSSPMLLH 119
Query: 86 EFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQ--TLITPRTVMVV 143
+++ + GF + D+++ L ++R F W L+ + D+ L++ T +V+
Sbjct: 120 SVFKWAEMKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVL 179
Query: 144 LARTAKVCSVRQTV---EFFRRFKKLVPDF-DTNCFNALLRTLCQEKSMTDA----RNVY 195
+ R A+ V+Q + EF R ++ + + LL LC+E + +A +
Sbjct: 180 IRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIG 239
Query: 196 HSLKHQFRPNLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGR 252
++ + P+++ FNILL+GW + + AE +++M+ M V P VVTY +L++ YC+ R
Sbjct: 240 GTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMR 299
Query: 253 ELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYN 312
++ A +VL+EM+ ++ + + + II GLG G+ +A +++ P + YN
Sbjct: 300 RVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYN 359
Query: 313 AAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGL 372
+ ++NFC A L A ++ M ++G++P TTYN FF+ F N + N+Y +++
Sbjct: 360 SLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEA 419
Query: 373 GCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEA 432
G P+ + ++++ + K+ +A+Q+ +M +G L + +L LLC + L EA
Sbjct: 420 GHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEA 479
Query: 433 EKCFLEMIEKGQKPSNVSFRRI 454
+ F + +G P ++F+ I
Sbjct: 480 FEEFDNAVRRGIIPQYITFKMI 501
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 186/396 (46%), Gaps = 6/396 (1%)
Query: 51 LRQSLKSSGVFLSNELIDQVLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYI 110
L +L SGV L LI++VL R + F+ + ++ + H+ +M+ I
Sbjct: 100 LELALNESGVELRPGLIERVLNRC---GDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKI 156
Query: 111 LGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDF 170
L + R F +W L+ E R ++ LI P +V++ R A V++ +E K +
Sbjct: 157 LSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEP 216
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGW---KTPEDAEVFFK 227
D F LL LC+ S+ DA ++ ++ +F NL+ F LL GW +A+
Sbjct: 217 DEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLV 276
Query: 228 KMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVG 287
+M E G PD+V Y +L+ Y ++ AY +L +MR R P+ YT +I L V
Sbjct: 277 QMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVD 336
Query: 288 QPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYN 347
+ ++A V EM+ Y C DV Y A + FC ++ + Y ++D+M KGL P+ TY
Sbjct: 337 RMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYM 396
Query: 348 LFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEK 407
+ + +M + HP+ +IRL K +V+ A++LW +M E
Sbjct: 397 HIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEEN 456
Query: 408 GFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKG 443
G ++ + L G L EA F EM+ +G
Sbjct: 457 GLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRG 492
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 112/250 (44%), Gaps = 42/250 (16%)
Query: 228 KMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVG 287
+M + G PD + L+D CK ++ A K+ ++MR R ++ +TS++ G VG
Sbjct: 208 EMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWCRVG 266
Query: 288 QPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYN 347
+ +A+ VL +M E G PD+ Y + + A ++ +AYDL+ +M +G PNA Y
Sbjct: 267 KMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYT 326
Query: 348 LFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEK 407
+ LI+ K +++E A++++ +M
Sbjct: 327 V-----------------------------------LIQALCKVDRMEEAMKVFVEMERY 351
Query: 408 GFGSYTLVSDVLFDLLCDMGKLGEAEKCFL---EMIEKGQKPSNVSFRRIKVLMELANRH 464
+ + L C GK+ +KC++ +MI+KG PS +++ I V E
Sbjct: 352 ECEADVVTYTALVSGFCKWGKI---DKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESF 408
Query: 465 EALQNLTQKM 474
E L +KM
Sbjct: 409 EECLELMEKM 418
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 118/280 (42%), Gaps = 48/280 (17%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGW------------- 216
+ NC+ L++ LC+ M +A V+ + +++ ++ T+ L+SG+
Sbjct: 321 NANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVL 380
Query: 217 -------------------------KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKG 251
++ E+ +KMR++ PD+ YN ++ + CK
Sbjct: 381 DDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKL 440
Query: 252 RELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAY 311
E+++A ++ +EM E LSP V T+ +I GL G +A D KEM G + V Y
Sbjct: 441 GEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLF-SVSQY 499
Query: 312 NA---AIRNFCIAKRLREAYDLVDEMTSKG-LNPNATTYNLFFRIFYWSNDLQSSWNMYH 367
+ K+L A D+ +TSKG N ++ ++ + + + +
Sbjct: 500 GTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCI 559
Query: 368 RMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEK 407
M+ + P + L++ KK E A G++ EK
Sbjct: 560 EMIEMDFMPQPDTFAKLMKGLKKLYNREFA----GEITEK 595
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 223/438 (50%), Gaps = 14/438 (3%)
Query: 46 SSPENLRQSLKSSGVFLSNELIDQVLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLD 105
+S E++ + L V ++ L+ QVL+R FS+ +Q F+ + + G+ H+ + +
Sbjct: 114 TSHEDVVKELSKCDVVVTESLVLQVLRR--FSNG-WNQAYGFFIWANSQTGYVHSGHTYN 170
Query: 106 TMLYILGRSRMFNHIWDLLIEARWKDQT-LITPRTVMVVLARTAKVCSVRQTVEFFRRFK 164
M+ +LG+ R F+ +W+L+ E +++ L+T T+ V+ R AK + V+ F +
Sbjct: 171 AMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEME 230
Query: 165 KLVP-DFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGW---KTPE 220
K DT N+L+ L +E S+ A V+ L +P+ +TFNIL+ G+ + +
Sbjct: 231 KSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFD 290
Query: 221 DAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSII 280
DA M+ TPDVVTY S V+ YCK + + ++L+EMRE +P+V+TYT ++
Sbjct: 291 DARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVM 350
Query: 281 GGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLN 340
LG Q +A V ++MKE GC PD Y++ I R ++A ++ ++MT++G+
Sbjct: 351 HSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVR 410
Query: 341 PNATTYNLFFRIFYWSNDLQSSWNMYHRM---MGLGCHPNTQSCMFLIRLFKKQEKVEMA 397
+ YN + + + + RM G C PN ++ L+++ ++K+++
Sbjct: 411 RDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLL 470
Query: 398 LQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVL 457
L MV+ +L LC GK+ EA F E + KG P + + + +
Sbjct: 471 GILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDE 530
Query: 458 MELANRHEA---LQNLTQ 472
+E N EA +Q+L Q
Sbjct: 531 LEKKNMAEAKLKIQSLVQ 548
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 168 bits (425), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 130/470 (27%), Positives = 218/470 (46%), Gaps = 44/470 (9%)
Query: 4 KRCTFQSQSTFL---PAPNLI--LSRLLSSTLNDGDVHRVMTIITTTSSPENLRQSLKSS 58
K +F+ ST L P+P+L+ +SR+LS N D +L +L +
Sbjct: 18 KSQSFRIFSTLLHDPPSPDLVNEISRVLSDHRNPKD---------------DLEHTLVAY 62
Query: 59 GVFLSNELIDQVLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFN 118
+S+ L++QVLKR + + P+ F+ + R F H+ S ++ ILG S+ F
Sbjct: 63 SPRVSSNLVEQVLKRCK-NLGFPAH--RFFLWARRIPDFAHSLESYHILVEILGSSKQFA 119
Query: 119 HIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRR-----FKKLVPDFDTN 173
+WD LIEAR + I+ + +V ++ + F R K V D D
Sbjct: 120 LLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQ- 178
Query: 174 CFNALLRTLCQEKSMTDARNVYHSLK-HQFRPNLQTFNILLSGWKTPEDAE---VFFKKM 229
LL +LC +K + A+ + K P+ +T++IL+ GW DA F +M
Sbjct: 179 ----LLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEM 234
Query: 230 REMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQP 289
E D++ YN+L+D CK +++ YK+ EM L PD ++ I G
Sbjct: 235 LERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDV 294
Query: 290 DKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLF 349
A VL MK Y P+V +N I+ C +++ +AY L+DEM KG NP+ TYN
Sbjct: 295 HSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSI 354
Query: 350 FRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGF 409
++ + + RM C P+ + +++L + + + A ++W M E+ F
Sbjct: 355 MAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKF 414
Query: 410 ----GSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIK 455
+YT+ ++ L+ GKL EA + F MI++G P + + ++
Sbjct: 415 YPTVATYTV---MIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLR 461
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 112/257 (43%)
Query: 219 PEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTS 278
P +A F +M E G+ P V + L+ C + + A + + + + P TY+
Sbjct: 154 PSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSI 213
Query: 279 IIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKG 338
++ G + AR V EM E C D+ AYNA + C + + Y + EM + G
Sbjct: 214 LVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLG 273
Query: 339 LNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMAL 398
L P+A ++ +F + + D+ S++ + RM PN + +I+ K EKV+ A
Sbjct: 274 LKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAY 333
Query: 399 QLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLM 458
L +M++KG T + + CD ++ A K M P ++ + L+
Sbjct: 334 LLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLL 393
Query: 459 ELANRHEALQNLTQKMA 475
R + + + M+
Sbjct: 394 IRIGRFDRATEIWEGMS 410
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 199/417 (47%), Gaps = 18/417 (4%)
Query: 78 HANP-SQTLEFYRYTGRRKGFFH-TAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLI 135
H P Q+L F+ + R + H + + M+ + G+ R F+ W L I+ I
Sbjct: 126 HGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHL-IDLMKSRNVEI 184
Query: 136 TPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVY 195
+ T +++ R + + V F R + D F+ ++ L +++ ++A++ +
Sbjct: 185 SIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFF 244
Query: 196 HSLKHQFRPNLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGR 252
SLK +F P++ + L+ GW +AE FK+M+ G+ P+V TY+ ++D C+
Sbjct: 245 DSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCG 304
Query: 253 ELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYN 312
++ +A+ V +M + +P+ IT+ +++ G+ +K V +MK+ GC PD YN
Sbjct: 305 QISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYN 364
Query: 313 AAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGL 372
I C + L A +++ M K NA+T+N FR D+ + MY +MM
Sbjct: 365 FLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEA 424
Query: 373 GCHPNTQSCMFLIRLFKKQEKVEMALQLWGDM----VEKGFGSYTLVSDVLFDLLCDMGK 428
C PNT + L+R+F + +M L++ +M VE +Y L L + C MG
Sbjct: 425 KCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRL----LVTMFCGMGH 480
Query: 429 LGEAEKCFLEMI-EKGQKPSNVSFRRIKVLMELANRHEALQNLTQKM---AVFGRPV 481
A K F EM+ EK PS + + + A + + + L +KM + RP+
Sbjct: 481 WNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLVARPL 537
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/462 (25%), Positives = 213/462 (46%), Gaps = 17/462 (3%)
Query: 26 LSSTLNDGDVHRVMTIITTTSSPE-NLRQSLKSSGVFLSNELIDQVLKRVRFSHANPSQT 84
+ S+ N +V RV +I + + N+ L + LS++LI +VL+R F HA
Sbjct: 122 VESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLER--FRHARKP-A 178
Query: 85 LEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVL 144
F+ + R+GF H + + ++M+ IL ++R F + +L E K L+T T + +
Sbjct: 179 FRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKG--LLTMETFTIAM 236
Query: 145 ARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRP 204
A ++ V F KK N LL +L + K +A+ ++ LK +F P
Sbjct: 237 KAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTP 296
Query: 205 NLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVL 261
N+ T+ +LL+GW + +A + M + G+ PD+V +N +++ + R+ A K+
Sbjct: 297 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLF 356
Query: 262 DEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIA 321
M+ + P+V +YT +I + A + +M + G PD Y I F
Sbjct: 357 HVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ 416
Query: 322 KRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSC 381
K+L Y+L+ EM KG P+ TYN ++ + + +Y++M+ P+ +
Sbjct: 417 KKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTF 476
Query: 382 MFLIRLFKKQEKVEMALQLWGDMVEKGF----GSYTLVSDVLFDLLCDMGKLGEAEKCFL 437
+++ + EM +W +M++KG SYT VL L GK EA +
Sbjct: 477 NMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYT----VLIRGLIGEGKSREACRYLE 532
Query: 438 EMIEKGQKPSNVSFRRIKVLMELANRHEALQNLTQKMAVFGR 479
EM++KG K + + + + E + L Q+ G+
Sbjct: 533 EMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGK 574
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/462 (25%), Positives = 211/462 (45%), Gaps = 17/462 (3%)
Query: 26 LSSTLNDGDVHRVMTIITTTSSPE-NLRQSLKSSGVFLSNELIDQVLKRVRFSHANPSQT 84
+ S+ N +V RV +I + + N+ L + LS++LI +VL+R F HA
Sbjct: 122 VESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLER--FRHARKP-A 178
Query: 85 LEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVL 144
F+ + R+GF H + + ++M+ IL ++R F + +L E K L+T T + +
Sbjct: 179 FRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKG--LLTMETFTIAM 236
Query: 145 ARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRP 204
A ++ V F KK N LL +L + K +A+ ++ LK +F P
Sbjct: 237 KAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTP 296
Query: 205 NLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVL 261
N+ T+ +LL+GW + +A + M + G+ PD+V +N +++ + + A K+
Sbjct: 297 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLF 356
Query: 262 DEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIA 321
M+ + P+V +YT +I + A + +M + G PD Y I F
Sbjct: 357 HVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ 416
Query: 322 KRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSC 381
K+L Y+L+ EM KG P+ TYN ++ + +Y++M+ P+ +
Sbjct: 417 KKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTF 476
Query: 382 MFLIRLFKKQEKVEMALQLWGDMVEKGF----GSYTLVSDVLFDLLCDMGKLGEAEKCFL 437
+++ + EM +W +M++KG SYT VL L GK EA +
Sbjct: 477 NMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYT----VLIRGLISEGKSREACRYLE 532
Query: 438 EMIEKGQKPSNVSFRRIKVLMELANRHEALQNLTQKMAVFGR 479
EM++KG K + + + + E + L Q+ G+
Sbjct: 533 EMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGK 574
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/458 (25%), Positives = 224/458 (48%), Gaps = 33/458 (7%)
Query: 40 TIITTTSSPENLRQSLKSSGVFLSNELIDQVLKRVRFSHANPSQTLEFYRYTGRRKGFFH 99
I+ ++ +++ ++L S V L+ ++ ++L+R+++ F+ + G ++ + H
Sbjct: 101 AIMANLNAYDDMEKALDESSVDLTTPVVCKILQRLQYEEKT---AFRFFTWAGHQEHYSH 157
Query: 100 TAFSLDTMLYILG----RSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQ 155
+ + M+ IL +++ F + D+L + ++T++ V V+L K C
Sbjct: 158 EPIAYNEMIDILSSTKYKNKQFRIVIDMLDYMKRNNKTVVL---VDVLLEILRKYCERYL 214
Query: 156 T-VEFFRRFKKL--VPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNIL 212
T V+ F + K++ + N FN LL LC+ + + + ++H+ +P+ TFN+L
Sbjct: 215 THVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVL 274
Query: 213 LSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDL 269
GW + P+ A ++M E G P+ TY + +D +C+ +++A + D M +
Sbjct: 275 FFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGS 334
Query: 270 S---PDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLRE 326
+ P T+ +I L + ++ +++ M GC PDV Y I C+A+++ E
Sbjct: 335 AVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDE 394
Query: 327 AYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIR 386
AY +DEM++KG P+ TYN F R+ + + +Y RM+ C P+ Q+ LI
Sbjct: 395 AYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLIS 454
Query: 387 LFKKQEKVEMALQLWGDMVEK----GFGSYTLVSDVLFDLLCDMGKLGEAEKCFL--EMI 440
+F + + + A W +M ++ +Y + + LFD C K E CFL E++
Sbjct: 455 MFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFD--CHRAK----EACFLLEEVV 508
Query: 441 EKGQK-PSNVSFRRIKVLMELANRHEALQNLTQKMAVF 477
KG K P V + L E+ N +A+ +++ M F
Sbjct: 509 NKGLKLPYRVFDSFLMRLSEVGNL-KAIHKVSEHMKKF 545
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 118/462 (25%), Positives = 211/462 (45%), Gaps = 17/462 (3%)
Query: 26 LSSTLNDGDVHRVMTIITTTSSPE-NLRQSLKSSGVFLSNELIDQVLKRVRFSHANPSQT 84
+ S+ N +V RV +I + + N+ L + LS++LI +VL+R F HA
Sbjct: 121 VESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLER--FRHARKP-A 177
Query: 85 LEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVL 144
F+ + R+GF H + + ++M+ IL ++R F + +L E K L+T T + +
Sbjct: 178 FRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKG--LLTMETFTIAM 235
Query: 145 ARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRP 204
A ++ V F KK N LL +L + K +A+ ++ LK +F P
Sbjct: 236 KAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTP 295
Query: 205 NLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVL 261
N+ T+ +LL+GW + +A + M + G+ PD+V +N +++ + + A K+
Sbjct: 296 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLF 355
Query: 262 DEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIA 321
M+ + P+V +YT +I + A + +M + G PD Y I F
Sbjct: 356 HVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ 415
Query: 322 KRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSC 381
K+L Y+L+ EM KG P+ TYN ++ + +Y++M+ P+ +
Sbjct: 416 KKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTF 475
Query: 382 MFLIRLFKKQEKVEMALQLWGDMVEKGF----GSYTLVSDVLFDLLCDMGKLGEAEKCFL 437
+++ + EM +W +M++KG SYT VL L GK EA +
Sbjct: 476 NMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYT----VLIRGLISEGKSREACRYLE 531
Query: 438 EMIEKGQKPSNVSFRRIKVLMELANRHEALQNLTQKMAVFGR 479
EM++KG K + + + + E + L Q+ G+
Sbjct: 532 EMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGK 573
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 201/418 (48%), Gaps = 13/418 (3%)
Query: 34 DVHRVMTIITTTSSPENLRQSLKSSGVFLSNELIDQVLKRVRFSHANPSQTLEFYRYTGR 93
DVH ++ SSPE +++ L G+ L+ EL+ +V+ R R S P+ L + +
Sbjct: 80 DVHNIIKH-HRGSSPEKIKRILDKCGIDLTEELVLEVVNRNR-SDWKPAYILS--QLVVK 135
Query: 94 RKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSV 153
+ ++ + +L +LG+ R F + E +D + +T V+L R A V
Sbjct: 136 QSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRD-GFVNEKTYEVLLNRYAAAHKV 194
Query: 154 RQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILL 213
+ V F R K+ D D F+ LL LC+ K + A ++ S + +F +++ N++L
Sbjct: 195 DEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMIL 254
Query: 214 SGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLS 270
+GW +A+ F+K + PDVV+Y ++++ K +L KA ++ M + +
Sbjct: 255 NGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRN 314
Query: 271 PDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDL 330
PDV ++I L + +A +V +E+ E G P+V YN+ +++ C +R + ++L
Sbjct: 315 PDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWEL 374
Query: 331 VDEMTSKG--LNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLF 388
V+EM KG +PN T++ + S D+ + RM C + + RL+
Sbjct: 375 VEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDI---VLERMAKNKCEMTSDLYNLMFRLY 431
Query: 389 KKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKP 446
+ +K E ++W +M G G + L GK+GEA F EM+ KG P
Sbjct: 432 VQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVP 489
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 103/222 (46%), Gaps = 13/222 (5%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSLKHQFR-PNLQTFNILLSGW----KTPEDAEVF 225
D + ++ L ++ + A +Y ++ R P+++ N ++ + PE EVF
Sbjct: 281 DVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVF 340
Query: 226 FKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRER--DLSPDVITYTSIIGGL 283
+++ E G P+VVTYNSL+ CK R EK +++++EM + SP+ +T++ ++
Sbjct: 341 -REISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLK-- 397
Query: 284 GLVGQPDKARD-VLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPN 342
Q K D VL+ M + C YN R + + + ++ EM GL P+
Sbjct: 398 --YSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPD 455
Query: 343 ATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFL 384
TY + + + + + + MM G P ++ M L
Sbjct: 456 QRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRTEMLL 497
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 106/238 (44%), Gaps = 1/238 (0%)
Query: 241 YNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMK 300
YN ++DV K R E+ ++V DEM +RD + TY ++ + D+A V + K
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205
Query: 301 EYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQ 360
E+G D+ A++ + C K + A L + + N+ + ++
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCS-RRREFGCDIKAMNMILNGWCVLGNVH 264
Query: 361 SSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLF 420
+ + ++ C P+ S +I K+ K+ A++L+ M + + + +
Sbjct: 265 EAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVI 324
Query: 421 DLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEALQNLTQKMAVFG 478
D LC ++ EA + F E+ EKG P+ V++ + + R E + L ++M + G
Sbjct: 325 DALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKG 382
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 3/158 (1%)
Query: 153 VRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ---FRPNLQTF 209
+ + +E FR + PD + +N+LL+ LC+ + + ++ + PN TF
Sbjct: 333 IPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTF 392
Query: 210 NILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDL 269
+ LL + +D ++ ++M + YN + +Y + + EK ++ EM L
Sbjct: 393 SYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGL 452
Query: 270 SPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPD 307
PD TYT I GL G+ +A +EM G P+
Sbjct: 453 GPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPE 490
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 181/374 (48%), Gaps = 17/374 (4%)
Query: 83 QTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMV 142
+ LEF+ + R GF HT + + ++ ILG+ F W L+ +++ T +
Sbjct: 63 KALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRI 122
Query: 143 VLARTAKVCSVRQTVEFFRRFKKLVPDF---DTNCFNALLRTLCQEKSMTDARNV---YH 196
V R V++ ++ + + + DF D F L+ LC+ K + +A + +
Sbjct: 123 VFKRYVTAHLVQEAIDAYDK----LDDFNLRDETSFYNLVDALCEHKHVVEAEELCFGKN 178
Query: 197 SLKHQFR-PNLQTFNILLSGWKTPE---DAEVFFKKMREMGVTPDVVTYNSLVDVYCKGR 252
+ + F N + N++L GW + ++KKM GVT D+ +Y+ +D+ CK
Sbjct: 179 VIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSG 238
Query: 253 ELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYN 312
+ KA K+ EM+ R + DV+ Y ++I +G + V +EM+E GC P+V +N
Sbjct: 239 KPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHN 298
Query: 313 AAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGL 372
I+ C R+R+AY ++DEM +G P++ TY F +++ S ++ RM+
Sbjct: 299 TIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILS---LFGRMIRS 355
Query: 373 GCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEA 432
G P + + L+R F++ ++ L +W M E G + + + D L G L A
Sbjct: 356 GVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMA 415
Query: 433 EKCFLEMIEKGQKP 446
+ EMIE+G P
Sbjct: 416 REYEEEMIERGLSP 429
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 185/389 (47%), Gaps = 20/389 (5%)
Query: 96 GFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQ 155
GF + + +L + S FN W E K + ++ + +++ + + +
Sbjct: 124 GFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN--KSKVVLDVYSFGILIKGCCEAGEIEK 181
Query: 156 TVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLS 214
+ + + + + L+ C++ + A++++ + K N +T+ +L++
Sbjct: 182 SFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLIN 241
Query: 215 G-WKTPEDAEVF--FKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSP 271
G +K + F ++KM+E GV P++ TYN +++ CK + A++V DEMRER +S
Sbjct: 242 GLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSC 301
Query: 272 DVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLV 331
+++TY ++IGGL + ++A V+ +MK G P++ YN I FC +L +A L
Sbjct: 302 NIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLC 361
Query: 332 DEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQ 391
++ S+GL+P+ TYN+ F D + M M G P+ + LI F +
Sbjct: 362 RDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARS 421
Query: 392 EKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNV-- 449
+ +E A+QL M E G VL C G++ EA + F M+EK +P+ V
Sbjct: 422 DNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIY 481
Query: 450 ------------SFRRIKVLMELANRHEA 466
S+R +K+L E+ + A
Sbjct: 482 NTMILGYCKEGSSYRALKLLKEMEEKELA 510
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 172/361 (47%), Gaps = 11/361 (3%)
Query: 121 WDLLIEARWKDQTLITPRTVM--VVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNAL 178
+DLLIE + +P V+ ++ K + + + F KL + + L
Sbjct: 183 FDLLIELT---EFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVL 239
Query: 179 LRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGW---KTPEDAEVFFKKMREMGV 234
+ L + +Y ++ PNL T+N +++ +DA F +MRE GV
Sbjct: 240 INGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGV 299
Query: 235 TPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARD 294
+ ++VTYN+L+ C+ +L +A KV+D+M+ ++P++ITY ++I G VG+ KA
Sbjct: 300 SCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALS 359
Query: 295 VLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFY 354
+ +++K G P + YN + FC A +V EM +G+ P+ TY + F
Sbjct: 360 LCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFA 419
Query: 355 WSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTL 414
S++++ + + M LG P+ + LI F + ++ A +L+ MVEK +
Sbjct: 420 RSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEV 479
Query: 415 VSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFR-RIKVLMELANRHEALQNLTQK 473
+ + + C G A K EM EK P+ S+R I+VL + EA + L +K
Sbjct: 480 IYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEA-ERLVEK 538
Query: 474 M 474
M
Sbjct: 539 M 539
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 147/316 (46%), Gaps = 8/316 (2%)
Query: 138 RTVMVVLARTAKVCSVRQTVEFFRRFKK--LVPDFDTNCFNALLRTLCQEKSMTDARNVY 195
RT V++ K +Q E + + ++ + P+ T +N ++ LC++ DA V+
Sbjct: 234 RTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYT--YNCVMNQLCKDGRTKDAFQVF 291
Query: 196 HSLKHQ-FRPNLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKG 251
++ + N+ T+N L+ G +A +M+ G+ P+++TYN+L+D +C
Sbjct: 292 DEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGV 351
Query: 252 RELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAY 311
+L KA + +++ R LSP ++TY ++ G G A ++KEM+E G P Y
Sbjct: 352 GKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTY 411
Query: 312 NAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMG 371
I F + + +A L M GL P+ TY++ F + + ++ M+
Sbjct: 412 TILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVE 471
Query: 372 LGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGE 431
C PN +I + K+ AL+L +M EK + ++LC K E
Sbjct: 472 KNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKE 531
Query: 432 AEKCFLEMIEKGQKPS 447
AE+ +MI+ G PS
Sbjct: 532 AERLVEKMIDSGIDPS 547
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 147/325 (45%), Gaps = 12/325 (3%)
Query: 61 FLSNELIDQVLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYIL---GRSRMF 117
++NE VL F + Q E Y + G F ++ + ++ L GR++
Sbjct: 229 LVANERTYTVLINGLFKNGVKKQGFEMYEKM-QEDGVFPNLYTYNCVMNQLCKDGRTKDA 287
Query: 118 NHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNA 177
++D + E R ++T T++ L R K+ + V+ + + P+ T +N
Sbjct: 288 FQVFDEMRE-RGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKS-DGINPNLIT--YNT 343
Query: 178 LLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKTPED---AEVFFKKMREMG 233
L+ C + A ++ LK + P+L T+NIL+SG+ D A K+M E G
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG 403
Query: 234 VTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKAR 293
+ P VTY L+D + + +EKA ++ M E L PDV TY+ +I G + GQ ++A
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEAS 463
Query: 294 DVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIF 353
+ K M E C P+ YN I +C A L+ EM K L PN +Y +
Sbjct: 464 RLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVL 523
Query: 354 YWSNDLQSSWNMYHRMMGLGCHPNT 378
+ + + +M+ G P+T
Sbjct: 524 CKERKSKEAERLVEKMIDSGIDPST 548
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 196/428 (45%), Gaps = 25/428 (5%)
Query: 60 VFLSNELIDQVLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNH 119
V LS+ L+ ++L R R + L ++ KG H++ + D + ILG+++
Sbjct: 83 VNLSDGLVHKLLHRFR---DDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKK--- 136
Query: 120 IWDLLIE--ARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNA 177
WD + E R + L+T TV ++ R A + V F R + + +T N
Sbjct: 137 -WDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNL 195
Query: 178 LLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGW---KTPEDAEVFFKKMREMGV 234
LL TLC+EK + AR V LK PN TFNI + GW E+A ++M+ G
Sbjct: 196 LLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGF 255
Query: 235 TPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARD 294
P V++Y +++ YC+ E K Y++L EM P+ ITYT+I+ L + ++A
Sbjct: 256 RPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALR 315
Query: 295 VLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVD-EMTSKGLNPNATTYNLFFRIF 353
V MK GC PD YN I A RL EA + EM G++ N +TYN ++
Sbjct: 316 VATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMY 375
Query: 354 YWSNDLQSSWNMYHRMMGLG-CHPNTQSCMFLIR-LFKKQEKVEMALQLWGDMVEKGF-- 409
++ + + M C+P+ + L+R FK+ + VE+ +L +MV K
Sbjct: 376 CHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVG-KLLKEMVTKHHLS 434
Query: 410 ---GSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEA 466
+YT L LC A F EMI + P + + + ++ N HE+
Sbjct: 435 LDESTYTF----LIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHES 490
Query: 467 LQNLTQKM 474
+ + M
Sbjct: 491 AERIEHIM 498
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 196/428 (45%), Gaps = 25/428 (5%)
Query: 60 VFLSNELIDQVLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNH 119
V LS+ L+ ++L R R + L ++ KG H++ + D + ILG+++
Sbjct: 83 VNLSDGLVHKLLHRFR---DDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKK--- 136
Query: 120 IWDLLIE--ARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNA 177
WD + E R + L+T TV ++ R A + V F R + + +T N
Sbjct: 137 -WDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNL 195
Query: 178 LLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGW---KTPEDAEVFFKKMREMGV 234
LL TLC+EK + AR V LK PN TFNI + GW E+A ++M+ G
Sbjct: 196 LLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGF 255
Query: 235 TPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARD 294
P V++Y +++ YC+ E K Y++L EM P+ ITYT+I+ L + ++A
Sbjct: 256 RPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALR 315
Query: 295 VLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVD-EMTSKGLNPNATTYNLFFRIF 353
V MK GC PD YN I A RL EA + EM G++ N +TYN ++
Sbjct: 316 VATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMY 375
Query: 354 YWSNDLQSSWNMYHRMMGLG-CHPNTQSCMFLIR-LFKKQEKVEMALQLWGDMVEKGF-- 409
++ + + M C+P+ + L+R FK+ + VE+ +L +MV K
Sbjct: 376 CHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVG-KLLKEMVTKHHLS 434
Query: 410 ---GSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEA 466
+YT L LC A F EMI + P + + + ++ N HE+
Sbjct: 435 LDESTYTF----LIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHES 490
Query: 467 LQNLTQKM 474
+ + M
Sbjct: 491 AERIEHIM 498
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 177/399 (44%), Gaps = 28/399 (7%)
Query: 80 NPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRT 139
+P +F++++ R GF H+ S + +IL +RM+ +L E
Sbjct: 121 DPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADC----D 176
Query: 140 VMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLK 199
V VL T VC VP F F+AL L + +A + +K
Sbjct: 177 VFDVLWSTRNVC---------------VPGFGV--FDALFSVLIDLGMLEEAIQCFSKMK 219
Query: 200 HQFR--PNLQTFNILL---SGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGREL 254
+FR P ++ N LL + +D + FFK M G P V TYN ++D CK ++
Sbjct: 220 -RFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDV 278
Query: 255 EKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAA 314
E A + +EM+ R L PD +TY S+I G G VG+ D +EMK+ C PDV YNA
Sbjct: 279 EAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNAL 338
Query: 315 IRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGC 374
I FC +L + EM GL PN +Y+ F +Q + Y M +G
Sbjct: 339 INCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGL 398
Query: 375 HPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEK 434
PN + LI K + A +L +M++ G + L D LCD ++ EAE+
Sbjct: 399 VPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEE 458
Query: 435 CFLEMIEKGQKPSNVSFRR-IKVLMELANRHEALQNLTQ 472
F +M G P+ S+ I ++ N AL+ L +
Sbjct: 459 LFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNE 497
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 157/333 (47%), Gaps = 17/333 (5%)
Query: 153 VRQTVEFFRRFKK--LVPDFDTNCFNALLRTLCQEKSMTDA-RNVYHSLKHQFRPNLQTF 209
++Q ++F+ ++ LVP+ T + +L+ C+ +++DA R L+ N+ T+
Sbjct: 383 MQQAIKFYVDMRRVGLVPNEYT--YTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTY 440
Query: 210 NILLSGWKTPE---DAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRE 266
L+ G E +AE F KM GV P++ +YN+L+ + K + +++A ++L+E++
Sbjct: 441 TALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKG 500
Query: 267 RDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLRE 326
R + PD++ Y + I GL + + + A+ V+ EMKE G + Y + + + E
Sbjct: 501 RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 560
Query: 327 AYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMG-LGCHPNTQSCMFLI 385
L+DEM + T+ + + + + + ++R+ G N +I
Sbjct: 561 GLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMI 620
Query: 386 RLFKKQEKVEMALQLWGDMVEKGF----GSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIE 441
K +VE A L+ MV+KG +YT + D F G + EA +M E
Sbjct: 621 DGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNF----KQGNVLEALALRDKMAE 676
Query: 442 KGQKPSNVSFRRIKVLMELANRHEALQNLTQKM 474
G K +++ + + N+ + ++ ++M
Sbjct: 677 IGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 709
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 113/266 (42%), Gaps = 40/266 (15%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGW---KTPEDAEVFFKKMR 230
+NAL+ + K+M A + + LK + +P+L + + G + E A+V +M+
Sbjct: 475 YNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMK 534
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
E G+ + + Y +L+D Y K + +LDEM+E D+ V+T+ +I GL
Sbjct: 535 ECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVS 594
Query: 291 KARDVLKEM-KEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYN-- 347
KA D + ++G + + A I C ++ A L ++M KGL P+ T Y
Sbjct: 595 KAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSL 654
Query: 348 -----------------------------LFFRIFYWS----NDLQSSWNMYHRMMGLGC 374
L + W N LQ + + M+G G
Sbjct: 655 MDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGI 714
Query: 375 HPNTQSCMFLIRLFKKQEKVEMALQL 400
HP+ C+ +++ + ++ A++L
Sbjct: 715 HPDEVLCISVLKKHYELGCIDEAVEL 740
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 174/345 (50%), Gaps = 7/345 (2%)
Query: 134 LITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARN 193
L+T TV+ L + + + ++ +K + D +N ++ LC+ K M DA N
Sbjct: 223 LVTYGTVVNGLCKRG---DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALN 279
Query: 194 VYHSLKHQ-FRPNLQTFNILLS---GWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYC 249
++ + ++ RP++ T++ L+S + DA M E + P+VVT+++L+D +
Sbjct: 280 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 339
Query: 250 KGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVP 309
K +L +A K+ DEM +R + PD+ TY+S+I G + + D+A+ + + M C+P+V
Sbjct: 340 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 399
Query: 310 AYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRM 369
Y+ I+ FC AKR+ E +L EM+ +GL N TY F+ + D ++ ++ +M
Sbjct: 400 TYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 459
Query: 370 MGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKL 429
+ +G HPN + L+ K K+ A+ ++ + +++ + +C GK+
Sbjct: 460 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKV 519
Query: 430 GEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEALQNLTQKM 474
+ + F + KG P+ +++ + E +L +KM
Sbjct: 520 EDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKM 564
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 132/288 (45%), Gaps = 6/288 (2%)
Query: 168 PDFDTNCFNALLRTLCQEKSMTDARN-VYHSLKHQFRPNLQTFNILLSGW---KTPEDAE 223
PD T ++LL C K ++DA V ++ ++P+ TF L+ G +A
Sbjct: 151 PDIVT--LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 224 VFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGL 283
+M + G PD+VTY ++V+ CK +++ A +L +M + + DV+ Y +II GL
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL 268
Query: 284 GLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNA 343
D A ++ EM G PDV Y++ I C R +A L+ +M + +NPN
Sbjct: 269 CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNV 328
Query: 344 TTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGD 403
T++ F L + +Y M+ P+ + LI F ++++ A ++
Sbjct: 329 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 388
Query: 404 MVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
M+ K + L C ++ E + F EM ++G + V++
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 150/320 (46%), Gaps = 8/320 (2%)
Query: 164 KKLVPDFDTNCFNALLRTLCQEKSMTDA-RNVYHSLKHQFRPNLQTFNILLSGWKTPE-- 220
K + PD T +++L+ LC +DA R + ++ + PN+ TF+ L+ +
Sbjct: 287 KGIRPDVFT--YSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 344
Query: 221 -DAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
+AE + +M + + PD+ TY+SL++ +C L++A + + M +D P+V+TY+++
Sbjct: 345 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTL 404
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
I G + ++ ++ +EM + G + Y I F A+ A + +M S G+
Sbjct: 405 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464
Query: 340 NPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQ 399
+PN TYN+ + L + ++ + P+ + +I K KVE +
Sbjct: 465 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWE 524
Query: 400 LWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRR-IKVLM 458
L+ ++ KG + + + C G EA+ +M E G P++ ++ I+ +
Sbjct: 525 LFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARL 584
Query: 459 ELANRHEALQNLTQKMAVFG 478
+R EA L ++M G
Sbjct: 585 RDGDR-EASAELIKEMRSCG 603
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 135/280 (48%), Gaps = 16/280 (5%)
Query: 169 DFDTNCFNALLRTLCQEKSMTDARNVYH-SLKHQFRPNLQTFNILLSGW---KTPEDAEV 224
D D +++L+ C + +A++++ + PN+ T++ L+ G+ K E+
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419
Query: 225 FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLG 284
F++M + G+ + VTY +L+ + + R+ + A V +M + P+++TY ++ GL
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479
Query: 285 LVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNAT 344
G+ KA V + ++ PD+ YN I C A ++ + ++L ++ KG++PN
Sbjct: 480 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVI 539
Query: 345 TYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDM 404
YN F + + ++ +M G PN+ + LIR + E + +L +M
Sbjct: 540 AYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Query: 405 VEKGFG----SYTLVSDVLFDLLCDMGKLGEAEKCFLEMI 440
GF + LV+++L D G +K FL+M+
Sbjct: 600 RSCGFAGDASTIGLVTNMLHD--------GRLDKSFLDML 631
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 122/288 (42%), Gaps = 15/288 (5%)
Query: 167 VPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKTPEDAEVFF 226
VP F FN L + C E+S A Y + LS +DA F
Sbjct: 27 VPSF----FN-LCGSGCWERSFASASGDYREILRN----------RLSDIIKVDDAVDLF 71
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
M + P +V +N L+ K + E + ++M+ +S D+ TY+ I
Sbjct: 72 GDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRR 131
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
Q A VL +M + G PD+ ++ + +C +KR+ +A LVD+M G P+ T+
Sbjct: 132 SQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTF 191
Query: 347 NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE 406
+ N + + +M+ GC P+ + ++ K+ +++AL L M +
Sbjct: 192 TTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEK 251
Query: 407 KGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
+ ++ + + D LC + +A F EM KG +P ++ +
Sbjct: 252 GKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 188/393 (47%), Gaps = 19/393 (4%)
Query: 95 KGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVM--VVLARTAKVCS 152
KG H+ ++L M+ R R ++ + + + + P TV+ +L C
Sbjct: 117 KGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIM---KLGYEPDTVIFNTLLNGLCLECR 173
Query: 153 VRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTF-- 209
V + +E R ++ N L+ LC ++DA + + + F+PN T+
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 210 --NILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRER 267
N++ +T E+ +KM E + D V Y+ ++D CK L+ A+ + +EM +
Sbjct: 234 VLNVMCKSGQTALAMELL-RKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 292
Query: 268 DLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREA 327
D+ITY ++IGG G+ D +L++M + P+V ++ I +F +LREA
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352
Query: 328 YDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRL 387
L+ EM +G+ PN TYN F N L+ + M M+ GC P+ + LI
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILING 412
Query: 388 FKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPS 447
+ K +++ L+L+ +M +G + T+ + L C GKL A+K F EM+ + +P
Sbjct: 413 YCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPD 472
Query: 448 NVSFRRIKVLME-LANRHEALQNLTQKMAVFGR 479
VS+ K+L++ L + E L + + +FG+
Sbjct: 473 IVSY---KILLDGLCDNGE----LEKALEIFGK 498
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 135/285 (47%), Gaps = 4/285 (1%)
Query: 171 DTNCFNALLRTLCQEKSMTD-ARNVYHSLKHQFRPNLQTFNILLSGWKTP---EDAEVFF 226
D +N L+ C D A+ + +K + PN+ TF++L+ + +A+
Sbjct: 297 DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL 356
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
K+M + G+ P+ +TYNSL+D +CK LE+A +++D M + PD++T+ +I G
Sbjct: 357 KEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA 416
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
+ D ++ +EM G + YN ++ FC + +L A L EM S+ + P+ +Y
Sbjct: 417 NRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476
Query: 347 NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE 406
+ + +L+ + ++ ++ + M +I KV+ A L+ +
Sbjct: 477 KILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 407 KGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
KG +++ LC L +A+ F +M E+G P +++
Sbjct: 537 KGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTY 581
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 155/329 (47%), Gaps = 19/329 (5%)
Query: 127 ARWKD---------QTLITPRTVM--VVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCF 175
RW D + I+P V V++ K +R+ + + + +T +
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITY 371
Query: 176 NALLRTLCQEKSMTDA-RNVYHSLKHQFRPNLQTFNILLSGWKTP---EDAEVFFKKMRE 231
N+L+ C+E + +A + V + P++ TFNIL++G+ +D F++M
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSL 431
Query: 232 MGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDK 291
GV + VTYN+LV +C+ +LE A K+ EM R + PD+++Y ++ GL G+ +K
Sbjct: 432 RGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEK 491
Query: 292 ARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFR 351
A ++ ++++ D+ Y I C A ++ +A+DL + KG+ +A YN+
Sbjct: 492 ALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMIS 551
Query: 352 IFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGS 411
+ L + ++ +M G P+ + LIR + A +L +M GF +
Sbjct: 552 ELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPA 611
Query: 412 YTLVSDVLFDLLCDMGKLGEAEKCFLEMI 440
++ ++L GE +K FL+M+
Sbjct: 612 DVSTVKMVINMLSS----GELDKSFLDML 636
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 110/251 (43%), Gaps = 3/251 (1%)
Query: 204 PNLQTFNILLSGWKTPEDAEVFF---KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKV 260
P + FN L S + E+ K+M G+ + T + +++ +C+ R+L A+
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 261 LDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCI 320
+ ++ + PD + + +++ GL L + +A +++ M E G P + N + C+
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205
Query: 321 AKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQS 380
++ +A L+D M G PN TY + S + + +M +
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 381 CMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMI 440
+I K ++ A L+ +M KGF + + + L C+ G+ + K +MI
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 441 EKGQKPSNVSF 451
++ P+ V+F
Sbjct: 326 KRKISPNVVTF 336
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 148/285 (51%), Gaps = 4/285 (1%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKTPE---DAEVFF 226
D +NA++ +LC+ K + DA + + ++ + RPN+ T+ L++G DA
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
M + +TP+V+TY++L+D + K ++ +A ++ +EM + PD++TY+S+I GL L
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 308
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
+ D+A + M GC DV +YN I FC AKR+ + L EM+ +GL N TY
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368
Query: 347 NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE 406
N + F+ + D+ + + +M G P+ + L+ ++E AL ++ DM +
Sbjct: 369 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK 428
Query: 407 KGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+ + + +C GK+ EA F + KG KP V++
Sbjct: 429 REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 473
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 136/280 (48%), Gaps = 4/280 (1%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHS-LKHQFRPNLQTFNILLSGW---KTPEDAEVFF 226
D FN ++ C ++ A ++ LK + P+ T L++G+ DA
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
KM E+G PD+V YN+++D CK + + A+ E+ + + P+V+TYT+++ GL
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
+ A +L +M + P+V Y+A + F ++ EA +L +EM ++P+ TY
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298
Query: 347 NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE 406
+ + + + M+ M+ GC + S LI F K ++VE ++L+ +M +
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358
Query: 407 KGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKP 446
+G S T+ + L G + +A++ F +M G P
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 130/280 (46%), Gaps = 3/280 (1%)
Query: 202 FRPNLQTFNILLSGWKTPEDAEV---FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAY 258
R +L TFNI+++ + + KM ++G PD VT SLV+ +C+ + A
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175
Query: 259 KVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNF 318
++D+M E PD++ Y +II L + + A D KE++ G P+V Y A +
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235
Query: 319 CIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNT 378
C + R +A L+ +M K + PN TY+ F + + + ++ M+ + P+
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295
Query: 379 QSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLE 438
+ LI ++++ A Q++ MV KG + + + L + C ++ + K F E
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355
Query: 439 MIEKGQKPSNVSFRRIKVLMELANRHEALQNLTQKMAVFG 478
M ++G + V++ + A + Q +M FG
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 395
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 131/278 (47%), Gaps = 4/278 (1%)
Query: 178 LLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTPEDAEVFF---KKMREMG 233
L +T ++ + DA +++ + K + P++ FN LLS + +V KKM +G
Sbjct: 56 LSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG 115
Query: 234 VTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKAR 293
+ D+ T+N +++ +C ++ A +L +M + PD +T S++ G + A
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175
Query: 294 DVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIF 353
++ +M E G PD+ AYNA I + C KR+ +A+D E+ KG+ PN TY
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235
Query: 354 YWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYT 413
S+ + + M+ PN + L+ F K KV A +L+ +MV
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295
Query: 414 LVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+ L + LC ++ EA + F M+ KG VS+
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSY 333
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 12/211 (5%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKTPED---AEVFF 226
D +N L+ C+ K + D ++ + + N T+N L+ G+ D A+ FF
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFF 388
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
+M G++PD+ TYN L+ C ELEKA + ++M++R++ D++TYT++I G+
Sbjct: 389 SQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKT 448
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
G+ ++A + + G PD+ Y + C L E L +M +GL N T
Sbjct: 449 GKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL 508
Query: 347 NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPN 377
+ D+ S + +M+ G P+
Sbjct: 509 S--------DGDITLSAELIKKMLSCGYAPS 531
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 165/329 (50%), Gaps = 7/329 (2%)
Query: 127 ARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEK 186
AR L T TV+ L + + + ++ +K + D + ++ LC K
Sbjct: 213 ARGCQPDLFTYGTVVNGLCKRG---DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYK 269
Query: 187 SMTDARNVYHSLKHQ-FRPNLQTFNIL---LSGWKTPEDAEVFFKKMREMGVTPDVVTYN 242
++ DA N++ + ++ RPN+ T+N L L + DA M E + P+VVT++
Sbjct: 270 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 329
Query: 243 SLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEY 302
+L+D + K +L +A K+ DEM +R + PD+ TY+S+I G + + D+A+ + + M
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389
Query: 303 GCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSS 362
C+P+V YN I+ FC AKR+ E +L EM+ +GL N TYN + + + D +
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 449
Query: 363 WNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDL 422
++ +M+ G P+ + L+ K K+E AL ++ + + +++ +
Sbjct: 450 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG 509
Query: 423 LCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+C GK+ + F + KG KP+ + +
Sbjct: 510 MCKAGKVEDGWDLFCSLSLKGVKPNVIIY 538
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 142/323 (43%), Gaps = 41/323 (12%)
Query: 168 PDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGW---KTPEDAE 223
PD T ++LL C K +++A + + +++PN TFN L+ G +A
Sbjct: 148 PDIVT--LSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAV 205
Query: 224 VFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGL 283
+M G PD+ TY ++V+ CK +++ A +L +M + + DV+ YT+II L
Sbjct: 206 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDAL 265
Query: 284 GLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKR-------------------- 323
+ A ++ EM G P+V YN+ IR C R
Sbjct: 266 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 325
Query: 324 ---------------LREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHR 368
L EA L DEM + ++P+ TY+ F + L + +M+
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 385
Query: 369 MMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGK 428
M+ C PN + LI+ F K ++VE ++L+ +M ++G T+ + L L G
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445
Query: 429 LGEAEKCFLEMIEKGQKPSNVSF 451
A+K F +M+ G P +++
Sbjct: 446 CDMAQKIFKKMVSDGVPPDIITY 468
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 125/249 (50%), Gaps = 6/249 (2%)
Query: 164 KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGW---KTP 219
+K+ P+ T F+AL+ +E + +A +Y + K P++ T++ L++G+
Sbjct: 319 RKINPNVVT--FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
++A+ F+ M P+VVTYN+L+ +CK + +E+ ++ EM +R L + +TY ++
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
I GL G D A+ + K+M G PD+ Y+ + C +L +A + + + +
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Query: 340 NPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQ 399
P+ TYN+ + ++ W+++ + G PN +I F ++ E A
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 556
Query: 400 LWGDMVEKG 408
L+ +M E G
Sbjct: 557 LFREMKEDG 565
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 136/277 (49%), Gaps = 10/277 (3%)
Query: 169 DFDTNCFNALLRTLCQEKSMTDARNVYH-SLKHQFRPNLQTFNILLSGW---KTPEDAEV 224
D D +++L+ C + +A++++ + PN+ T+N L+ G+ K E+
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 225 FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLG 284
F++M + G+ + VTYN+L+ + + + A K+ +M + PD+ITY+ ++ GL
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476
Query: 285 LVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNAT 344
G+ +KA V + +++ PD+ YN I C A ++ + +DL ++ KG+ PN
Sbjct: 477 KYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVI 536
Query: 345 TYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDM 404
Y F + + ++ M G PN+ + LIR + + +L +M
Sbjct: 537 IYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
Query: 405 VEKGF-GSYTLVSDVLFDLLCDMGKLGEAEKCFLEMI 440
GF G + +S V+ ++L D G EK +LEM+
Sbjct: 597 RSCGFVGDASTISMVI-NMLHD----GRLEKSYLEML 628
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 115/246 (46%), Gaps = 5/246 (2%)
Query: 205 NLQTFNILLSGW----KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKV 260
+L ++NIL++ + + P A KM ++G PD+VT +SL++ YC G+ + +A +
Sbjct: 114 DLYSYNILINCFCRRSQLPL-ALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 172
Query: 261 LDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCI 320
+D+M + P+ +T+ ++I GL L + +A ++ M GC PD+ Y + C
Sbjct: 173 VDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK 232
Query: 321 AKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQS 380
+ A L+ +M + + Y ++ + N++ M G PN +
Sbjct: 233 RGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 292
Query: 381 CMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMI 440
LIR + A +L DM+E+ + L D GKL EAEK + EMI
Sbjct: 293 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 441 EKGQKP 446
++ P
Sbjct: 353 KRSIDP 358
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 119/264 (45%), Gaps = 4/264 (1%)
Query: 192 RNVYHSL-KHQFRPNLQTFNILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCK 250
R VY S + +R L N+LL +DA F +M + P +V +N L+ K
Sbjct: 36 RGVYFSAASYDYREKLSR-NVLLD--LKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAK 92
Query: 251 GRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPA 310
+ + + + M+ +S D+ +Y +I Q A VL +M + G PD+
Sbjct: 93 MNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVT 152
Query: 311 YNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMM 370
++ + +C KR+ EA LVD+M PN T+N + N + + RM+
Sbjct: 153 LSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMV 212
Query: 371 GLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLG 430
GC P+ + ++ K+ +++AL L M + + ++ + D LC+ +
Sbjct: 213 ARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVN 272
Query: 431 EAEKCFLEMIEKGQKPSNVSFRRI 454
+A F EM KG +P+ V++ +
Sbjct: 273 DALNLFTEMDNKGIRPNVVTYNSL 296
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 147/281 (52%), Gaps = 4/281 (1%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLS---GWKTPEDAEVFFKKMR 230
+N ++ LC+ K M DA N++ ++ + RPN+ T++ L+S + DA M
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
E + PDV T+++L+D + K +L +A K+ DEM +R + P ++TY+S+I G + + D
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
+A+ + + M C+PDV YN I+ FC KR+ E ++ EM+ +GL N TYN+
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG 410
+ + + D + ++ M+ G PN + L+ K K+E A+ ++ +
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 411 SYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+++ + +C GK+ + F + KG KP V++
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 539
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 146/288 (50%), Gaps = 4/288 (1%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKTPEDAEVFFK-- 227
+T FN L+ L ++A + + + +P+L T+ ++++G D ++ F
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
Query: 228 -KMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
KM + + P V+ YN+++D CK + ++ A + EM + + P+V+TY+S+I L
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
G+ A +L +M E PDV ++A I F +L EA L DEM + ++P+ TY
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 364
Query: 347 NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE 406
+ F + L + M+ M+ C P+ + LI+ F K ++VE ++++ +M +
Sbjct: 365 SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ 424
Query: 407 KGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
+G T+ ++L L G A++ F EM+ G P+ +++ +
Sbjct: 425 RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 472
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 122/258 (47%), Gaps = 8/258 (3%)
Query: 120 IWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALL 179
++D +++ R D +++T +++ ++ +Q EF K PD T +N L+
Sbjct: 348 LYDEMVK-RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS-KHCFPDVVT--YNTLI 403
Query: 180 RTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKTPED---AEVFFKKMREMGVT 235
+ C+ K + + V+ + + N T+NIL+ G D A+ FK+M GV
Sbjct: 404 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP 463
Query: 236 PDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDV 295
P+++TYN+L+D CK +LEKA V + ++ + P + TY +I G+ G+ + D+
Sbjct: 464 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 296 LKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYW 355
+ G PDV AYN I FC EA L EM G PN+ YN R
Sbjct: 524 FCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLR 583
Query: 356 SNDLQSSWNMYHRMMGLG 373
D ++S + M G
Sbjct: 584 DGDREASAELIKEMRSCG 601
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 141/320 (44%), Gaps = 53/320 (16%)
Query: 164 KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGW---KTP 219
+K+ PD T F+AL+ +E + +A +Y + K P++ T++ L++G+
Sbjct: 320 RKINPDVFT--FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
++A+ F+ M PDVVTYN+L+ +CK + +E+ +V EM +R L + +TY +
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNA-------------------------- 313
I GL G D A+++ KEM G P++ YN
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 314 ---------AIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWN 364
I C A ++ + +DL ++ KG+ P+ YN F + +
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 557
Query: 365 MYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG----SYTLVSDVLF 420
++ M G PN+ LIR + E + +L +M GF + LV+++L
Sbjct: 558 LFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLH 617
Query: 421 DLLCDMGKLGEAEKCFLEMI 440
D G +K FL+M+
Sbjct: 618 D--------GRLDKSFLDML 629
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 142/309 (45%), Gaps = 6/309 (1%)
Query: 175 FNALLRTLCQEKSMTDA-RNVYHSLKHQFRPNLQTFNILLSGWKTPE---DAEVFFKKMR 230
+++L+ LC +DA R + ++ + P++ TF+ L+ + +AE + +M
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
+ + P +VTY+SL++ +C L++A ++ + M + PDV+TY ++I G + +
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 413
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
+ +V +EM + G + YN I+ A A ++ EM S G+ PN TYN
Sbjct: 414 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG 410
+ L+ + ++ + P + +I K KVE L+ ++ KG
Sbjct: 474 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK 533
Query: 411 SYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRR-IKVLMELANRHEALQN 469
+ + + C G EA+ F EM E G P++ + I+ + +R EA
Sbjct: 534 PDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDR-EASAE 592
Query: 470 LTQKMAVFG 478
L ++M G
Sbjct: 593 LIKEMRSCG 601
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 106/235 (45%)
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
+DA F +M + P ++ ++ L+ K + + + ++M+ + + TY+ +
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
I Q A VL +M + G P++ ++ + +C +KR+ EA LVD+M G
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182
Query: 340 NPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQ 399
PN T+N + N + + RM+ GC P+ + ++ K+ ++A
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242
Query: 400 LWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
L M + L+ + + D LC + +A F EM KG +P+ V++ +
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 148/281 (52%), Gaps = 4/281 (1%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNIL---LSGWKTPEDAEVFFKKMR 230
+N ++ LC K++ DA N++ + ++ RPN+ T+N L L + DA M
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
E + P+VVT+++L+D + K +L +A K+ DEM +R + PD+ TY+S+I G + + D
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
+A+ + + M C+P+V YN I+ FC AKR+ E +L EM+ +GL N TY
Sbjct: 379 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG 410
F+ + + ++ ++ +M+ G P+ + L+ KVE AL ++ +
Sbjct: 439 HGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME 498
Query: 411 SYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+++ + +C GK+ + F + KG KP+ V++
Sbjct: 499 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTY 539
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 138/285 (48%), Gaps = 4/285 (1%)
Query: 171 DTNCFNALLRTLCQEKSMTDARN-VYHSLKHQFRPNLQTFNILLSGWKTPEDAEV---FF 226
D+ FN L+ L + ++A V + +P+L T+ I+++G D ++
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
KKM + + P VV YN+++D C + + A + EM + + P+V+TY S+I L
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
G+ A +L +M E P+V ++A I F +L EA L DEM + ++P+ TY
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 364
Query: 347 NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE 406
+ F + L + +M+ M+ C PN + LI+ F K ++V+ ++L+ +M +
Sbjct: 365 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQ 424
Query: 407 KGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+G T+ L + A+ F +M+ G P +++
Sbjct: 425 RGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTY 469
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 109/245 (44%), Gaps = 3/245 (1%)
Query: 205 NLQTFNILLSGWKTPED---AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVL 261
NL T++IL++ + A KM ++G PD+VT NSL++ +C G + A ++
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 262 DEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIA 321
+M E PD T+ ++I GL + +A ++ M GC PD+ Y + C
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKR 234
Query: 322 KRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSC 381
+ A L+ +M + P YN ++ + N++ M G PN +
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 382 MFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIE 441
LIR + A +L DM+E+ + L D GKL EAEK + EMI+
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 442 KGQKP 446
+ P
Sbjct: 355 RSIDP 359
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 126/249 (50%), Gaps = 6/249 (2%)
Query: 164 KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGW---KTP 219
+K+ P+ T F+AL+ +E + +A +Y + K P++ T++ L++G+
Sbjct: 320 RKINPNVVT--FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
++A+ F+ M P+VVTYN+L+ +CK + +++ ++ EM +R L + +TYT++
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
I G + D A+ V K+M G PD+ Y+ + C ++ A + + + +
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM 497
Query: 340 NPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQ 399
P+ TYN+ + ++ W+++ + G PN + ++ F ++ E A
Sbjct: 498 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 557
Query: 400 LWGDMVEKG 408
L+ +M E+G
Sbjct: 558 LFREMKEEG 566
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 132/280 (47%), Gaps = 16/280 (5%)
Query: 169 DFDTNCFNALLRTLCQEKSMTDARNVYH-SLKHQFRPNLQTFNILLSGW---KTPEDAEV 224
D D +++L+ C + +A++++ + PN+ T+N L+ G+ K ++
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417
Query: 225 FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLG 284
F++M + G+ + VTY +L+ + + RE + A V +M + PD++TY+ ++ GL
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC 477
Query: 285 LVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNAT 344
G+ + A V + ++ PD+ YN I C A ++ + +DL ++ KG+ PN
Sbjct: 478 NNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVV 537
Query: 345 TYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDM 404
TY F + + ++ M G P++ + LIR + + +L +M
Sbjct: 538 TYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Query: 405 VEKGF----GSYTLVSDVLFDLLCDMGKLGEAEKCFLEMI 440
F + LV+++L D G +K FL+M+
Sbjct: 598 RSCRFVGDASTIGLVTNMLHD--------GRLDKSFLKML 629
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 108/235 (45%)
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
+DA F M + P +V ++ L+ K + + + ++M+ +S ++ TY+ +
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
I Q A VL +M + G PD+ N+ + FC R+ +A LV +M G
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 340 NPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQ 399
P++ T+N + N + + RM+ GC P+ + ++ K+ +++AL
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 400 LWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
L M + ++ + + D LC+ + +A F EM KG +P+ V++ +
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 150/281 (53%), Gaps = 4/281 (1%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLS---GWKTPEDAEVFFKKMR 230
++ ++ +LC+ + DA N++ ++++ RPN+ T++ L+S ++ DA M
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
E + P+VVT+N+L+D + K +L +A K+ DEM +R + PD+ TY+S+I G + + D
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
+A+ + + M C+P+V YN I FC AKR+ E +L EM+ +GL N TY
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG 410
F+ + D ++ ++ +M+ G HPN + L+ K K+E A+ ++ +
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 502
Query: 411 SYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+++ + +C GK+ + F + KG KP + +
Sbjct: 503 PTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIY 543
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 136/285 (47%), Gaps = 4/285 (1%)
Query: 171 DTNCFNALLRTLCQEKSMTDARN-VYHSLKHQFRPNLQTFNILLSGWKTPEDAEVFFK-- 227
DT F L+ L ++A V ++ +PNL T+ ++++G D ++ F
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLL 248
Query: 228 -KMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
KM + +VV Y++++D CK R + A + EM + + P+VITY+S+I L
Sbjct: 249 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 308
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
+ A +L +M E P+V +NA I F +L EA L DEM + ++P+ TY
Sbjct: 309 ERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 368
Query: 347 NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE 406
+ F + L + +M+ M+ C PN + LI F K ++++ ++L+ +M +
Sbjct: 369 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQ 428
Query: 407 KGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+G T+ L A+ F +M+ G P+ +++
Sbjct: 429 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTY 473
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 129/278 (46%), Gaps = 4/278 (1%)
Query: 175 FNALLRTLCQEKSMTDA-RNVYHSLKHQFRPNLQTFNILLSGWKTPE---DAEVFFKKMR 230
+++L+ LC + +DA R + ++ + PN+ TFN L+ + +AE + +M
Sbjct: 298 YSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMI 357
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
+ + PD+ TY+SL++ +C L++A + + M +D P+V+TY ++I G + D
Sbjct: 358 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRID 417
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
+ ++ +EM + G + Y I F A+ A + +M S G++PN TYN
Sbjct: 418 EGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG 410
+ L+ + ++ + P + +I K KVE L+ + KG
Sbjct: 478 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 537
Query: 411 SYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSN 448
++ + + C G EA+ F +M E G P +
Sbjct: 538 PDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 147/317 (46%), Gaps = 12/317 (3%)
Query: 143 VLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQ 201
+L+ AK+ + + ++L + +N L+ C+ ++ A + + K
Sbjct: 91 LLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG 150
Query: 202 FRPNLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAY 258
+ P++ T + LL+G+ K DA +M EMG PD +T+ +L+ + +A
Sbjct: 151 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210
Query: 259 KVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNF 318
++D M +R P+++TY ++ GL G D A ++L +M+ +V Y+ I +
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSL 270
Query: 319 CIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFY----WSNDLQSSWNMYHRMMGLGC 374
C + +A +L EM +KG+ PN TY+ WS+ + +M R +
Sbjct: 271 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKI---- 326
Query: 375 HPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEK 434
+PN + LI F K+ K+ A +L+ +M+++ L + C +L EA+
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 386
Query: 435 CFLEMIEKGQKPSNVSF 451
F MI K P+ V++
Sbjct: 387 MFELMISKDCFPNVVTY 403
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 88/175 (50%), Gaps = 4/175 (2%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGW---KTPEDAEVFFKKMR 230
+N L+ C+ K + + ++ + + N T+ L+ G+ + ++A++ FK+M
Sbjct: 403 YNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 462
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
GV P+++TYN+L+D CK +LEKA V + ++ + P + TY +I G+ G+ +
Sbjct: 463 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 522
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATT 345
D+ + G PDV YN I FC EA L +M G P++ T
Sbjct: 523 DGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 119/284 (41%), Gaps = 39/284 (13%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTPEDAEVFF---KKMR 230
+ +LR + DA ++ + K + P++ FN LLS + ++ +KM+
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
+G++ ++ TYN L++ +C+ ++ A +L +M + P ++T +S++ G
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG-------- 164
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
+C KR+ +A LVD+M G P+ T+
Sbjct: 165 ---------------------------YCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 197
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG 410
+ N + + RM+ GC PN + ++ K+ +++A L M
Sbjct: 198 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 257
Query: 411 SYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
+ ++ + D LC +A F EM KG +P+ +++ +
Sbjct: 258 ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/431 (23%), Positives = 195/431 (45%), Gaps = 15/431 (3%)
Query: 51 LRQSLKSSGVFLSNELIDQVLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYI 110
+++SL S G+ LS +++ VL R S + F+ + R G S +L
Sbjct: 104 IQKSLSSLGIGLSIDIVADVLNRGNLS---GEAMVTFFDWAVREPGVTKDVGSYSVILRA 160
Query: 111 LGRSRMFNHIWDLL----IEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKL 166
LGR ++F+ + D+L E D +T + + +V VR+ +E F +
Sbjct: 161 LGRRKLFSFMMDVLKGMVCEGVNPDLECLT-----IAMDSFVRVHYVRRAIELFEESESF 215
Query: 167 VPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKT---PEDAE 223
T FNALLR LC+ ++ A++V+++ K + ++NI++SGW E+ E
Sbjct: 216 GVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEME 275
Query: 224 VFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGL 283
K+M E G PD ++Y+ L++ + + + ++ D ++ + PD Y ++I
Sbjct: 276 KVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNF 335
Query: 284 GLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNA 343
D++ + M + C P++ Y+ + +++ +A ++ +EM S+G+ P
Sbjct: 336 ISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTT 395
Query: 344 TTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGD 403
F + ++ +Y + GC + + L++ + K M L +W +
Sbjct: 396 GLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDE 455
Query: 404 MVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANR 463
M E G+ S V + + D LC +G L A E + KG P+ + R+ + +N+
Sbjct: 456 MQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNK 515
Query: 464 HEALQNLTQKM 474
E L K+
Sbjct: 516 TELAYKLFLKI 526
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 136/317 (42%), Gaps = 5/317 (1%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGW---KTPEDAEVFF 226
D ++ +LR L + K + +V + + P+L+ I + + A F
Sbjct: 150 DVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELF 209
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
++ GV ++N+L+ C+ + A V + ++ ++ D +Y +I G +
Sbjct: 210 EESESFGVKCSTESFNALLRCLCERSHVSAAKSVFN-AKKGNIPFDSCSYNIMISGWSKL 268
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
G+ ++ VLKEM E G PD +Y+ I R+ ++ ++ D + KG P+A Y
Sbjct: 269 GEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVY 328
Query: 347 NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE 406
N F + D S Y RM+ C PN ++ L+ K KV AL+++ +M+
Sbjct: 329 NAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLS 388
Query: 407 KGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEA 466
+G T + LC G A + + + G + S +++ + + +
Sbjct: 389 RGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGM 448
Query: 467 LQNLTQKMAVFGRPVQV 483
L N+ +M G P V
Sbjct: 449 LLNVWDEMQESGYPSDV 465
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 95/241 (39%), Gaps = 7/241 (2%)
Query: 144 LARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHS-LKHQF 202
L RT ++ +VE F K D N +NA++ + ++ Y L +
Sbjct: 300 LGRTGRI---NDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEEC 356
Query: 203 RPNLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYK 259
PNL+T++ L+SG + DA F++M GV P S + C A
Sbjct: 357 EPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMV 416
Query: 260 VLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFC 319
+ + R+ Y ++ L G+ +V EM+E G DV Y + C
Sbjct: 417 IYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLC 476
Query: 320 IAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQ 379
I L A +++E KG PN Y+ SN + ++ ++ ++ N +
Sbjct: 477 IIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKKARATENAR 536
Query: 380 S 380
S
Sbjct: 537 S 537
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 149/285 (52%), Gaps = 4/285 (1%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLS---GWKTPEDAEVFF 226
D FN ++ +LC+ + + DA N++ ++ + RPN+ T++ L+S + DA
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 318
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
M E + P++VT+N+L+D + K + +A K+ D+M +R + PD+ TY S++ G +
Sbjct: 319 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
+ DKA+ + + M C+PDV YN I+ FC +KR+ + +L EM+ +GL + TY
Sbjct: 379 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 438
Query: 347 NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE 406
+ + D ++ ++ +M+ G P+ + L+ K+E AL+++ M +
Sbjct: 439 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 498
Query: 407 KGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+ + + +C GK+ + F + KG KP+ V++
Sbjct: 499 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 543
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 136/285 (47%), Gaps = 4/285 (1%)
Query: 171 DTNCFNALLRTLCQEKSMTDARN-VYHSLKHQFRPNLQTFNILLSGWKTPEDAEV---FF 226
DT F L+ L ++A V ++ +PNL T+ ++++G D ++
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLL 248
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
KM + DVV +N+++D CK R ++ A + EM + + P+V+TY+S+I L
Sbjct: 249 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 308
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
G+ A +L +M E P++ +NA I F + EA L D+M + ++P+ TY
Sbjct: 309 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTY 368
Query: 347 NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE 406
N F + L + M+ M+ C P+ + LI+ F K ++VE +L+ +M
Sbjct: 369 NSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSH 428
Query: 407 KGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+G T+ L L G A+K F +M+ G P +++
Sbjct: 429 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 473
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 124/254 (48%), Gaps = 8/254 (3%)
Query: 120 IWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALL 179
++D +I+ R D + T +++ ++ +Q EF K PD T +N L+
Sbjct: 352 LYDDMIK-RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS-KDCFPDVVT--YNTLI 407
Query: 180 RTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGW---KTPEDAEVFFKKMREMGVT 235
+ C+ K + D ++ + H+ + T+ L+ G ++A+ FK+M GV
Sbjct: 408 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 467
Query: 236 PDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDV 295
PD++TY+ L+D C +LEKA +V D M++ ++ D+ YT++I G+ G+ D D+
Sbjct: 468 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 527
Query: 296 LKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYW 355
+ G P+V YN I C + L+EAY L+ +M G PN+ TYN R
Sbjct: 528 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLR 587
Query: 356 SNDLQSSWNMYHRM 369
D +S + M
Sbjct: 588 DGDKAASAELIREM 601
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 128/284 (45%), Gaps = 4/284 (1%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKH-QFRPNLQTFNILLSGW---KTPEDAEVFFKKMR 230
FN LL + + K ++ ++ + L T+NIL++ + A KM
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
++G P +VT +SL++ YC G+ + A ++D+M E PD IT+T++I GL L +
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
+A ++ M + GC P++ Y + C A +L+++M + + + +N
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG 410
+ + N++ M G PN + LI + A QL DM+EK
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 327
Query: 411 SYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
+ + L D GK EAEK + +MI++ P ++ +
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSL 371
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 137/288 (47%), Gaps = 12/288 (4%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGW---KTPEDAEVFFKKMR 230
+N L+ C+ ++ A + + K + P++ T + LL+G+ K DA +M
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
EMG PD +T+ +L+ + +A ++D M +R P+++TY ++ GL G D
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
A ++L +M+ DV +N I + C + + +A +L EM +KG+ PN TY+
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
Query: 351 RIFY----WSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE 406
WS+ Q +M + + +PN + LI F K+ K A +L+ DM++
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKKI----NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358
Query: 407 KGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
+ + L + C +L +A++ F M+ K P V++ +
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTL 406
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 139/320 (43%), Gaps = 53/320 (16%)
Query: 164 KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGW---KTP 219
KK+ P+ T FNAL+ +E +A +Y + K P++ T+N L++G+
Sbjct: 324 KKINPNLVT--FNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 381
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
+ A+ F+ M PDVVTYN+L+ +CK + +E ++ EM R L D +TYT++
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYN--------------------------- 312
I GL G D A+ V K+M G PD+ Y+
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 313 --------AAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWN 364
I C A ++ + +DL ++ KG+ PN TYN LQ ++
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 561
Query: 365 MYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGF----GSYTLVSDVLF 420
+ +M G PN+ + LIR + + +L +M F + LV+++L
Sbjct: 562 LLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLH 621
Query: 421 DLLCDMGKLGEAEKCFLEMI 440
D G +K FL+M+
Sbjct: 622 D--------GRLDKSFLDML 633
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 119/284 (41%), Gaps = 39/284 (13%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTPEDAEVFF---KKMR 230
+ +LR + + DA ++ + K + P++ FN LLS + +V +KM+
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
+ + + TYN L++ +C+ ++ A +L +M + P ++T +S++ G
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG-------- 164
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
+C KR+ +A LVD+M G P+ T+
Sbjct: 165 ---------------------------YCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 197
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG 410
+ N + + RM+ GC PN + ++ K+ ++AL L M
Sbjct: 198 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE 257
Query: 411 SYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
+ ++ + + D LC + +A F EM KG +P+ V++ +
Sbjct: 258 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 73/147 (49%), Gaps = 7/147 (4%)
Query: 161 RRFKKLVPDF---DTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGW 216
+ FK++V D D ++ LL LC + A V+ + K + + ++ + ++ G
Sbjct: 456 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 515
Query: 217 ---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDV 273
+D F + GV P+VVTYN+++ C R L++AY +L +M+E P+
Sbjct: 516 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNS 575
Query: 274 ITYTSIIGGLGLVGQPDKARDVLKEMK 300
TY ++I G + ++++EM+
Sbjct: 576 GTYNTLIRAHLRDGDKAASAELIREMR 602
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 143/284 (50%), Gaps = 5/284 (1%)
Query: 176 NALLRTLCQEKSMTDARNVYHSLKHQ--FRPNLQTFNILLSGWKTP---EDAEVFFKKMR 230
N ++ C+E + DA N + +Q F P+ TFN L++G + A M
Sbjct: 263 NVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVML 322
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
+ G PDV TYNS++ CK E+++A +VLD+M RD SP+ +TY ++I L Q +
Sbjct: 323 QEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVE 382
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
+A ++ + + G PDV +N+ I+ C+ + R A +L +EM SKG P+ TYN+
Sbjct: 383 EATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLI 442
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG 410
L + NM +M GC + + LI F K K A +++ +M G
Sbjct: 443 DSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVS 502
Query: 411 SYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
++ + L D LC ++ +A + +MI +GQKP ++ +
Sbjct: 503 RNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSL 546
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 133/276 (48%), Gaps = 4/276 (1%)
Query: 208 TFNILLSGWKTP---EDAEVFFKKMREM-GVTPDVVTYNSLVDVYCKGRELEKAYKVLDE 263
+ N+++ G+ EDA F ++M G PD T+N+LV+ CK ++ A +++D
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 264 MRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKR 323
M + PDV TY S+I GL +G+ +A +VL +M C P+ YN I C +
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 324 LREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMF 383
+ EA +L +TSKG+ P+ T+N + + + + + ++ M GC P+ +
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 384 LIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKG 443
LI + K++ AL + M G + + L D C K EAE+ F EM G
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500
Query: 444 QKPSNVSFRRIKVLMELANRHEALQNLTQKMAVFGR 479
++V++ + + + R E L +M + G+
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ 536
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 134/299 (44%), Gaps = 4/299 (1%)
Query: 149 KVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQ 207
K V+ +E + D D +N+++ LC+ + +A V + PN
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTV 366
Query: 208 TFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEM 264
T+N L+S E+A + + G+ PDV T+NSL+ C R A ++ +EM
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426
Query: 265 RERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRL 324
R + PD TY +I L G+ D+A ++LK+M+ GC V YN I FC A +
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKT 486
Query: 325 REAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFL 384
REA ++ DEM G++ N+ TYN S ++ + + +M+ G P+ + L
Sbjct: 487 REAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSL 546
Query: 385 IRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKG 443
+ F + ++ A + M G + L LC G++ A K + KG
Sbjct: 547 LTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKG 605
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 145/324 (44%), Gaps = 6/324 (1%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHS-LKHQFRPNLQTFNILLSGW----KTPEDAEVF 225
D FN L+ LC+ + A + L+ + P++ T+N ++SG + E EV
Sbjct: 294 DQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVL 353
Query: 226 FKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGL 285
+M +P+ VTYN+L+ CK ++E+A ++ + + + PDV T+ S+I GL L
Sbjct: 354 -DQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 286 VGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATT 345
A ++ +EM+ GC PD YN I + C +L EA +++ +M G + T
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472
Query: 346 YNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMV 405
YN F +N + + ++ M G N+ + LI K +VE A QL M+
Sbjct: 473 YNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI 532
Query: 406 EKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHE 465
+G + L C G + +A M G +P V++ + + A R E
Sbjct: 533 MEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592
Query: 466 ALQNLTQKMAVFGRPVQVRESRPV 489
L + + + G + PV
Sbjct: 593 VASKLLRSIQMKGINLTPHAYNPV 616
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 123/263 (46%), Gaps = 8/263 (3%)
Query: 154 RQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLK-HQFRPNLQTFNIL 212
R +E F + + D +N L+ +LC + + +A N+ ++ ++ T+N L
Sbjct: 417 RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 476
Query: 213 LSGW----KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERD 268
+ G+ KT E AE F +M GV+ + VTYN+L+D CK R +E A +++D+M
Sbjct: 477 IDGFCKANKTRE-AEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 535
Query: 269 LSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAY 328
PD TY S++ G KA D+++ M GC PD+ Y I C A R+ A
Sbjct: 536 QKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVAS 595
Query: 329 DLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLG-CHPNTQSCMFLIR- 386
L+ + KG+N YN + + + N++ M+ P+ S + R
Sbjct: 596 KLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRG 655
Query: 387 LFKKQEKVEMALQLWGDMVEKGF 409
L + A+ +++EKGF
Sbjct: 656 LCNGGGPIREAVDFLVELLEKGF 678
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 129/307 (42%), Gaps = 39/307 (12%)
Query: 209 FNILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERD 268
N+L+ G + + E+ KM G+ PDV T+N L+ C+ +L A +L++M
Sbjct: 161 LNLLVDG-NSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYG 219
Query: 269 LSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGC------------------------ 304
L PD T+T+++ G G D A + ++M E+GC
Sbjct: 220 LVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDAL 279
Query: 305 ------------YPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRI 352
+PD +N + C A ++ A +++D M +G +P+ TYN
Sbjct: 280 NFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISG 339
Query: 353 FYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSY 412
+++ + + +M+ C PNT + LI K+ +VE A +L + KG
Sbjct: 340 LCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 399
Query: 413 TLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRR-IKVLMELANRHEALQNLT 471
+ L LC A + F EM KG +P ++ I L EAL N+
Sbjct: 400 VCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEAL-NML 458
Query: 472 QKMAVFG 478
++M + G
Sbjct: 459 KQMELSG 465
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 88/217 (40%), Gaps = 11/217 (5%)
Query: 265 RERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRL 324
++ + SP+ Y I+ LG G D + +L++MK C + I ++ +
Sbjct: 75 KKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQ 134
Query: 325 REAYDLVDEMTSK-GLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMF 383
E +VD M + GL P+ YN + N L+ + +M G P+ +
Sbjct: 135 DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNV 194
Query: 384 LIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSD-----VLFDLLCDMGKLGEAEKCFLE 438
LI+ + ++ A+ + DM SY LV D + + G L A + +
Sbjct: 195 LIKALCRAHQLRPAILMLEDM-----PSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQ 249
Query: 439 MIEKGQKPSNVSFRRIKVLMELANRHEALQNLTQKMA 475
M+E G SNVS I R E N Q+M+
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMS 286
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 149/285 (52%), Gaps = 4/285 (1%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLS---GWKTPEDAEVFF 226
D FN ++ +LC+ + + DA N++ ++ + RPN+ T++ L+S + DA
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
M E + P++VT+N+L+D + K + +A K+ D+M +R + PD+ TY S+I G +
Sbjct: 244 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 303
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
+ DKA+ + + M C+PD+ YN I+ FC +KR+ + +L EM+ +GL + TY
Sbjct: 304 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 363
Query: 347 NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE 406
+ + D ++ ++ +M+ G P+ + L+ K+E AL+++ M +
Sbjct: 364 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 423
Query: 407 KGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+ + + +C GK+ + F + KG KP+ V++
Sbjct: 424 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 468
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 137/285 (48%), Gaps = 4/285 (1%)
Query: 171 DTNCFNALLRTLCQEKSMTDARN-VYHSLKHQFRPNLQTFNILLSGWKTPEDAEVFFK-- 227
DT F L+ L ++A V ++ +PNL T+ ++++G D ++ F
Sbjct: 114 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLL 173
Query: 228 -KMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
KM + DVV +N+++D CK R ++ A + EM + + P+V+TY+S+I L
Sbjct: 174 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 233
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
G+ A +L +M E P++ +NA I F + EA L D+M + ++P+ TY
Sbjct: 234 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTY 293
Query: 347 NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE 406
N F + L + M+ M+ C P+ + LI+ F K ++VE +L+ +M
Sbjct: 294 NSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH 353
Query: 407 KGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+G T+ L L G A+K F +M+ G P +++
Sbjct: 354 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 398
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 110/221 (49%), Gaps = 7/221 (3%)
Query: 153 VRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNI 211
+Q EF K PD DT +N L++ C+ K + D ++ + H+ + T+
Sbjct: 309 AKQMFEFMVS-KDCFPDLDT--YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 212 LLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERD 268
L+ G ++A+ FK+M GV PD++TY+ L+D C +LEKA +V D M++ +
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425
Query: 269 LSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAY 328
+ D+ YT++I G+ G+ D D+ + G P+V YN I C + L+EAY
Sbjct: 426 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 485
Query: 329 DLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRM 369
L+ +M G P++ TYN R D +S + M
Sbjct: 486 ALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 129/284 (45%), Gaps = 4/284 (1%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKH-QFRPNLQTFNILLSGW---KTPEDAEVFFKKMR 230
FN LL + + K ++ ++ NL T+NIL++ + A KM
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
++G P +VT +SL++ YC G+ + A ++D+M E PD IT+T++I GL L +
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
+A ++ M + GC P++ Y + C + A++L+++M + + + +N
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG 410
+ + N++ M G PN + LI + A QL DM+EK
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 411 SYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
+ + L D GK EAEK +MI++ P ++ +
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 296
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 115/249 (46%), Gaps = 6/249 (2%)
Query: 164 KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGW---KTP 219
KK+ P+ T FNAL+ +E +A ++ + K P++ T+N L++G+
Sbjct: 249 KKINPNLVT--FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
+ A+ F+ M PD+ TYN+L+ +CK + +E ++ EM R L D +TYT++
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
I GL G D A+ V K+M G PD+ Y+ + C +L +A ++ D M +
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 340 NPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQ 399
+ Y + + W+++ + G PN + +I + ++ A
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 486
Query: 400 LWGDMVEKG 408
L M E G
Sbjct: 487 LLKKMKEDG 495
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 109/254 (42%), Gaps = 38/254 (14%)
Query: 204 PNLQTFNILLSGWKTPEDAEVFF---KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKV 260
P++ FN LLS + ++ +KM+ +G++ ++ TYN L++ +C+ ++ A +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 261 LDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCI 320
L +M + P ++T +S++ G +C
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNG-----------------------------------YCH 92
Query: 321 AKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQS 380
KR+ +A LVD+M G P+ T+ + N + + RM+ GC PN +
Sbjct: 93 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 152
Query: 381 CMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMI 440
++ K+ +++A L M + ++ + + D LC + +A F EM
Sbjct: 153 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 212
Query: 441 EKGQKPSNVSFRRI 454
KG +P+ V++ +
Sbjct: 213 TKGIRPNVVTYSSL 226
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 7/147 (4%)
Query: 161 RRFKKLVPDF---DTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGW 216
+ FK++V D D ++ LL LC + A V+ + K + + ++ + ++ G
Sbjct: 381 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 440
Query: 217 ---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDV 273
+D F + GV P+VVTYN+++ C R L++AY +L +M+E PD
Sbjct: 441 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDS 500
Query: 274 ITYTSIIGGLGLVGQPDKARDVLKEMK 300
TY ++I G + ++++EM+
Sbjct: 501 GTYNTLIRAHLRDGDKAASAELIREMR 527
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 167/378 (44%), Gaps = 41/378 (10%)
Query: 80 NPSQTLEFYRYTGR-RKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPR 138
N L+ + Y G+ GF H + ++L+ L R+R F+ + L+ + R +
Sbjct: 61 NIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGE 120
Query: 139 TVMVVLARTAKVCS-VRQTVEFFRRFKKLVPDFDTN----CFNALLRTLCQEKSMTDARN 193
+ + L R + ++ F R +PDF N LL L Q
Sbjct: 121 NLFIDLLRNYGLAGRYESSMRIFLR----IPDFGVKRSVRSLNTLLNVLIQN-------- 168
Query: 194 VYHSLKHQFRPNLQTFNILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRE 253
Q F+++ + +K +++ G+TP++ T N LV CK +
Sbjct: 169 -------------QRFDLVHAMFKNSKES---------FGITPNIFTCNLLVKALCKKND 206
Query: 254 LEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNA 313
+E AYKVLDE+ L P+++TYT+I+GG G + A+ VL+EM + G YPD Y
Sbjct: 207 IESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTV 266
Query: 314 AIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLG 373
+ +C R EA ++D+M + PN TY + R + NM+ M+
Sbjct: 267 LMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERS 326
Query: 374 CHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAE 433
P++ C +I + KV+ A LW M++ + L LC G++ EA
Sbjct: 327 FMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEAR 386
Query: 434 KCFLEMIEKGQKPSNVSF 451
K F E EKG PS +++
Sbjct: 387 KLFDE-FEKGSIPSLLTY 403
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 107/242 (44%), Gaps = 5/242 (2%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGW---KTPEDAEVFF 226
D + L+ C+ ++A V + K++ PN T+ +++ K +A F
Sbjct: 260 DATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMF 319
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
+M E PD ++D C+ ++++A + +M + + PD +++I L
Sbjct: 320 DEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKE 379
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
G+ +AR + E E G P + YN I C L EA L D+M + PNA TY
Sbjct: 380 GRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTY 438
Query: 347 NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE 406
N+ + +++ + M+ +GC PN + + L +K K E A+++ V
Sbjct: 439 NVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVM 498
Query: 407 KG 408
G
Sbjct: 499 NG 500
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 164 KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHS-LKHQFRPNLQTFNILLSGWKTPE-- 220
+ +PD C ++ LC++ + +A ++ LK+ P+ + L+ W E
Sbjct: 325 RSFMPDSSLCC--KVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIH-WLCKEGR 381
Query: 221 --DAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTS 278
+A F + E G P ++TYN+L+ C+ EL +A ++ D+M ER P+ TY
Sbjct: 382 VTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNV 440
Query: 279 IIGGLGLVGQPDKARDVLKEMKEYGCYPD 307
+I GL G + VL+EM E GC+P+
Sbjct: 441 LIEGLSKNGNVKEGVRVLEEMLEIGCFPN 469
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 151/285 (52%), Gaps = 4/285 (1%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLS---GWKTPEDAEVFF 226
D ++ ++ +LC+ + + DA N++ + ++ RP++ T++ L+S + DA
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 298
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
M E + P+VVT+NSL+D + K +L +A K+ DEM +R + P+++TY S+I G +
Sbjct: 299 SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 358
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
+ D+A+ + M C PDV YN I FC AK++ + +L +M+ +GL N TY
Sbjct: 359 DRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTY 418
Query: 347 NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE 406
F+ ++D ++ ++ +M+ G HPN + L+ K K+E A+ ++ + +
Sbjct: 419 TTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQK 478
Query: 407 KGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+++ + +C GK+ + F + KG KP +++
Sbjct: 479 SKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAY 523
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 134/288 (46%), Gaps = 4/288 (1%)
Query: 171 DTNCFNALLRTLCQEKSMTDARN-VYHSLKHQFRPNLQTFNILLSGW---KTPEDAEVFF 226
DT F L+ L Q ++A V + +P+L T+ +++G P+ A
Sbjct: 169 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 228
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
KM + + DVV Y++++D CK R ++ A + EM + + PDV TY+S+I L
Sbjct: 229 NKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 288
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
G+ A +L +M E P+V +N+ I F +L EA L DEM + ++PN TY
Sbjct: 289 GRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTY 348
Query: 347 NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE 406
N F + L + ++ M+ C P+ + LI F K +KV ++L+ DM
Sbjct: 349 NSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSR 408
Query: 407 KGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
+G T+ L A+ F +M+ G P+ +++ +
Sbjct: 409 RGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTL 456
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 125/281 (44%), Gaps = 45/281 (16%)
Query: 164 KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTPED- 221
K +PD T +N L+ C+ K + D ++ + + N T+ L+ G+ D
Sbjct: 374 KDCLPDVVT--YNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDC 431
Query: 222 --AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
A++ FK+M GV P+++TYN+L+D CK +LEKA V + +++ + PD+ TY +
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM 491
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
G+ G+ + D+ + G PDV AYN I FC EAY L +M G
Sbjct: 492 SEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGP 551
Query: 340 NPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQ 399
P++ TYN R D +S + M +SC F
Sbjct: 552 LPDSGTYNTLIRAHLRDGDKAASAELIKEM---------RSCRF---------------- 586
Query: 400 LWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMI 440
GD +Y LV+D+L D G +K FLE++
Sbjct: 587 -AGDA-----STYGLVTDMLHD--------GRLDKGFLEVL 613
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 123/249 (49%), Gaps = 6/249 (2%)
Query: 164 KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGW---KTP 219
+K+ P+ T FN+L+ +E + +A ++ + + PN+ T+N L++G+
Sbjct: 304 RKINPNVVT--FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
++A+ F M PDVVTYN+L++ +CK +++ ++ +M R L + +TYT++
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
I G D A+ V K+M G +P++ YN + C +L +A + + + +
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481
Query: 340 NPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQ 399
P+ TYN+ + ++ W+++ + G P+ + +I F K+ E A
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYT 541
Query: 400 LWGDMVEKG 408
L+ M E G
Sbjct: 542 LFIKMKEDG 550
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 118/253 (46%), Gaps = 3/253 (1%)
Query: 205 NLQTFNILLSGWKTPED---AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVL 261
NL T+NI+++ A KM ++G P +VT NSL++ +C G + +A ++
Sbjct: 99 NLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 158
Query: 262 DEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIA 321
D+M E PD +T+T+++ GL + +A +++ M GC PD+ Y A I C
Sbjct: 159 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 218
Query: 322 KRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSC 381
A +L+++M + + Y+ + + N++ M G P+ +
Sbjct: 219 GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTY 278
Query: 382 MFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIE 441
LI + A +L DM+E+ + + L D GKL EAEK F EMI+
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338
Query: 442 KGQKPSNVSFRRI 454
+ P+ V++ +
Sbjct: 339 RSIDPNIVTYNSL 351
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 103/235 (43%)
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
++A F +M + P +V ++ L+ K ++ + ++M +S ++ TY +
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
I L Q A +L +M + G P + N+ + FC R+ EA LVD+M G
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 340 NPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQ 399
P+ T+ + N + + RM+ GC P+ + +I K+ + ++AL
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226
Query: 400 LWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
L M + + ++ + D LC + +A F EM KG +P ++ +
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 155/310 (50%), Gaps = 11/310 (3%)
Query: 151 CSVRQTVEFFR-----RFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRP 204
C +R+ + F+ K L P+ + +N ++ LC+E M + V + + +
Sbjct: 251 CKLRKIDDGFKLLRSMALKGLEPNLIS--YNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 205 NLQTFNILLSGWKTPED---AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVL 261
+ T+N L+ G+ + A V +M G+TP V+TY SL+ CK + +A + L
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Query: 262 DEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIA 321
D+MR R L P+ TYT+++ G G ++A VL+EM + G P V YNA I C+
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428
Query: 322 KRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSC 381
++ +A ++++M KGL+P+ +Y+ F S D+ + + M+ G P+T +
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITY 488
Query: 382 MFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIE 441
LI+ F +Q + + A L+ +M+ G L + C G L +A + EM+E
Sbjct: 489 SSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE 548
Query: 442 KGQKPSNVSF 451
KG P V++
Sbjct: 549 KGVLPDVVTY 558
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 150/290 (51%), Gaps = 6/290 (2%)
Query: 170 FDTNCFNALLRTLCQEKSMTDARNVYHS--LKHQFRPNLQTFNILLSGWKTPED---AEV 224
D +N L++ C+E + A V H+ L+H P++ T+ L+ + A
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQAL-VMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAME 366
Query: 225 FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLG 284
F +MR G+ P+ TY +LVD + + + +AY+VL EM + SP V+TY ++I G
Sbjct: 367 FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHC 426
Query: 285 LVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNAT 344
+ G+ + A VL++MKE G PDV +Y+ + FC + + EA + EM KG+ P+
Sbjct: 427 VTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTI 486
Query: 345 TYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDM 404
TY+ + F + + ++Y M+ +G P+ + LI + + +E ALQL +M
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546
Query: 405 VEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
VEKG + VL + L + EA++ L++ + PS+V++ +
Sbjct: 547 VEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL 596
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 147/296 (49%), Gaps = 19/296 (6%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLK-HQFRPNLQTFNILLSGWKTPEDAEVFFKKMREM- 232
+ +L+ ++C+ +M A ++ PN +T+ L+ G+ ++ +REM
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN 407
Query: 233 --GVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
G +P VVTYN+L++ +C ++E A VL++M+E+ LSPDV++Y++++ G D
Sbjct: 408 DNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVD 467
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
+A V +EM E G PD Y++ I+ FC +R +EA DL +EM GL P+ TY
Sbjct: 468 EALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALI 527
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQL-----WGDMV 405
+ DL+ + +++ M+ G P+ + LI KQ + A +L + + V
Sbjct: 528 NAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV 587
Query: 406 EKGFGSYTLVSDV----------LFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+TL+ + L C G + EA++ F M+ K KP ++
Sbjct: 588 PSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAY 643
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 143/285 (50%), Gaps = 5/285 (1%)
Query: 175 FNALL-RTLCQEKSMTDARNVYHS-LKHQFRPNLQTFNILLSGWKTPEDAEV---FFKKM 229
+NA+L T+ +++++ A NV+ L+ Q PN+ T+NIL+ G+ + +V F KM
Sbjct: 172 YNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKM 231
Query: 230 REMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQP 289
G P+VVTYN+L+D YCK R+++ +K+L M + L P++I+Y +I GL G+
Sbjct: 232 ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRM 291
Query: 290 DKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLF 349
+ VL EM G D YN I+ +C +A + EM GL P+ TY
Sbjct: 292 KEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSL 351
Query: 350 FRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGF 409
+ ++ + +M G PN ++ L+ F ++ + A ++ +M + GF
Sbjct: 352 IHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGF 411
Query: 410 GSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
+ + L + C GK+ +A +M EKG P VS+ +
Sbjct: 412 SPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTV 456
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 123/250 (49%), Gaps = 21/250 (8%)
Query: 164 KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGW---KTP 219
K L PD + ++ +L C+ + +A V + + +P+ T++ L+ G+ +
Sbjct: 444 KGLSPDVVS--YSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 501
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
++A +++M +G+ PD TY +L++ YC +LEKA ++ +EM E+ + PDV+TY+ +
Sbjct: 502 KEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVL 561
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRN---------------FCIAKRL 324
I GL + +A+ +L ++ P Y+ I N FC+ +
Sbjct: 562 INGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMM 621
Query: 325 REAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFL 384
EA + + M K P+ T YN+ + D++ ++ +Y M+ G +T + + L
Sbjct: 622 TEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIAL 681
Query: 385 IRLFKKQEKV 394
++ K+ KV
Sbjct: 682 VKALHKEGKV 691
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 112/260 (43%), Gaps = 10/260 (3%)
Query: 220 EDAEVFFKKMREMGVTPDVV-----TYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVI 274
E A + FK ++E T D+ ++ +V Y + ++KA ++ + P V+
Sbjct: 114 EYASLVFKSLQE---TYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVL 170
Query: 275 TYTSIIGG-LGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDE 333
+Y +++ + A +V KEM E P+V YN IR FC A + A L D+
Sbjct: 171 SYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDK 230
Query: 334 MTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEK 393
M +KG PN TYN + + + + M G PN S +I ++ +
Sbjct: 231 METKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGR 290
Query: 394 VEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRR 453
++ + +M +G+ + + L C G +A EM+ G PS +++
Sbjct: 291 MKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTS 350
Query: 454 -IKVLMELANRHEALQNLTQ 472
I + + N + A++ L Q
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQ 370
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 168/368 (45%), Gaps = 43/368 (11%)
Query: 142 VVLARTAKVCSVRQT-VEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKH 200
V L R +K C T + FR F ++ ++ +N ++ +CQ + +A ++ ++
Sbjct: 215 VYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMEL 274
Query: 201 Q-FRPNLQTFNILLSG----------WKTPE----------------------------D 221
+ + P++ +++ +++G WK E +
Sbjct: 275 KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAE 334
Query: 222 AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIG 281
AE F +M G+ PD V Y +L+D +CK ++ A K EM RD++PDV+TYT+II
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Query: 282 GLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNP 341
G +G +A + EM G PD + I +C A +++A+ + + M G +P
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 342 NATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLW 401
N TY DL S+ + H M +G PN + ++ K +E A++L
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 402 GDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELA 461
G+ G + T+ L D C G++ +A++ EM+ KG +P+ V+F VLM
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF---NVLMNGF 571
Query: 462 NRHEALQN 469
H L++
Sbjct: 572 CLHGMLED 579
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 156/318 (49%), Gaps = 12/318 (3%)
Query: 135 ITPRTVMVVLARTAKVCSVRQTVEFFRRF-----KKLVPDFDTNCFNALLRTLCQEKSMT 189
ITP V+ A + C + VE + F K L PD T F L+ C+ M
Sbjct: 382 ITP-DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT--FTELINGYCKAGHMK 438
Query: 190 DARNVY-HSLKHQFRPNLQTFNILLSGWKTPED---AEVFFKKMREMGVTPDVVTYNSLV 245
DA V+ H ++ PN+ T+ L+ G D A +M ++G+ P++ TYNS+V
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 246 DVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCY 305
+ CK +E+A K++ E L+ D +TYT+++ G+ DKA+++LKEM G
Sbjct: 499 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Query: 306 PDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNM 365
P + +N + FC+ L + L++ M +KG+ PNATT+N + + N+L+++ +
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 618
Query: 366 YHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCD 425
Y M G P+ ++ L++ K ++ A L+ +M KGF VL
Sbjct: 619 YKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK 678
Query: 426 MGKLGEAEKCFLEMIEKG 443
K EA + F +M +G
Sbjct: 679 RKKFLEAREVFDQMRREG 696
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 164/368 (44%), Gaps = 13/368 (3%)
Query: 95 KGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMV--VLARTAKVCS 152
KG+ S T++ R + +W L+ + K + P + + ++ ++C
Sbjct: 275 KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG---LKPNSYIYGSIIGLLCRICK 331
Query: 153 VRQTVEFFRRF--KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTF 209
+ + E F + ++PD T + L+ C+ + A ++ + + P++ T+
Sbjct: 332 LAEAEEAFSEMIRQGILPD--TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTY 389
Query: 210 NILLSGWKTPED---AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRE 266
++SG+ D A F +M G+ PD VT+ L++ YCK ++ A++V + M +
Sbjct: 390 TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 449
Query: 267 RDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLRE 326
SP+V+TYT++I GL G D A ++L EM + G P++ YN+ + C + + E
Sbjct: 450 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 509
Query: 327 AYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIR 386
A LV E + GLN + TY + S ++ + + M+G G P + L+
Sbjct: 510 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 569
Query: 387 LFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKP 446
F +E +L M+ KG + L C L A + +M +G P
Sbjct: 570 GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGP 629
Query: 447 SNVSFRRI 454
++ +
Sbjct: 630 DGKTYENL 637
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 125/251 (49%), Gaps = 4/251 (1%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGW---KTPEDAEVFFKKMR 230
+ L+ LC+E + A + H + K +PN+ T+N +++G E+A +
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
G+ D VTY +L+D YCK E++KA ++L EM + L P ++T+ ++ G L G +
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
+L M G P+ +N+ ++ +CI L+ A + +M S+G+ P+ TY
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG 410
+ + +++ +W ++ M G G + + LI+ F K++K A +++ M +G
Sbjct: 639 KGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLA 698
Query: 411 SYTLVSDVLFD 421
+ + D D
Sbjct: 699 ADKEIFDFFSD 709
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 115/530 (21%), Positives = 208/530 (39%), Gaps = 87/530 (16%)
Query: 1 MLLKRCTFQSQSTFLPAPNLILSRLLSSTLNDGDVHRVMTIITTTSSPENLRQSLKSSGV 60
+L+KR T S F+ +L L STL D T P+ S K + V
Sbjct: 8 LLMKRGTLSSFRNFIQLFSLQSRGLSFSTLTD-----------TRPFPD---YSPKKASV 53
Query: 61 FLSNELIDQVLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRM-FNH 119
E + Q+ ++ A P + R + F D ++++L + + +
Sbjct: 54 -RDTEFVHQITNVIKLRRAEPLR---------RSLKPYECKFKTDHLIWVLMKIKCDYRL 103
Query: 120 IWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQT-----------------VEFFRR 162
+ D AR + + + +++ LA +K V Q+ V+FF
Sbjct: 104 VLDFFDWARSRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDL 163
Query: 163 FKKLVPDF--DTNCFNALLRTLCQEKSMTDARNVYHS-LKHQFRPNLQTFNILLS----- 214
D+ D F+ + L + +AR V+ L + ++ + N+ L+
Sbjct: 164 LVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKD 223
Query: 215 GWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVI 274
+KT A + F++ E+GV +V +YN ++ C+ +++A+ +L M + +PDVI
Sbjct: 224 CYKTAT-AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVI 282
Query: 275 TYTSIIGGLGLVGQPDK-----------------------------------ARDVLKEM 299
+Y++++ G G+ DK A + EM
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 342
Query: 300 KEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDL 359
G PD Y I FC +R A EM S+ + P+ TY F D+
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 360 QSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVL 419
+ ++H M G P++ + LI + K ++ A ++ M++ G + L
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 420 FDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI-KVLMELANRHEALQ 468
D LC G L A + EM + G +P+ ++ I L + N EA++
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 512
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 168/368 (45%), Gaps = 43/368 (11%)
Query: 142 VVLARTAKVCSVRQT-VEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKH 200
V L R +K C T + FR F ++ ++ +N ++ +CQ + +A ++ ++
Sbjct: 215 VYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMEL 274
Query: 201 Q-FRPNLQTFNILLSG----------WKTPE----------------------------D 221
+ + P++ +++ +++G WK E +
Sbjct: 275 KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAE 334
Query: 222 AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIG 281
AE F +M G+ PD V Y +L+D +CK ++ A K EM RD++PDV+TYT+II
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Query: 282 GLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNP 341
G +G +A + EM G PD + I +C A +++A+ + + M G +P
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 342 NATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLW 401
N TY DL S+ + H M +G PN + ++ K +E A++L
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 402 GDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELA 461
G+ G + T+ L D C G++ +A++ EM+ KG +P+ V+F VLM
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF---NVLMNGF 571
Query: 462 NRHEALQN 469
H L++
Sbjct: 572 CLHGMLED 579
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 156/318 (49%), Gaps = 12/318 (3%)
Query: 135 ITPRTVMVVLARTAKVCSVRQTVEFFRRF-----KKLVPDFDTNCFNALLRTLCQEKSMT 189
ITP V+ A + C + VE + F K L PD T F L+ C+ M
Sbjct: 382 ITP-DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT--FTELINGYCKAGHMK 438
Query: 190 DARNVY-HSLKHQFRPNLQTFNILLSGWKTPED---AEVFFKKMREMGVTPDVVTYNSLV 245
DA V+ H ++ PN+ T+ L+ G D A +M ++G+ P++ TYNS+V
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 246 DVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCY 305
+ CK +E+A K++ E L+ D +TYT+++ G+ DKA+++LKEM G
Sbjct: 499 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Query: 306 PDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNM 365
P + +N + FC+ L + L++ M +KG+ PNATT+N + + N+L+++ +
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 618
Query: 366 YHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCD 425
Y M G P+ ++ L++ K ++ A L+ +M KGF VL
Sbjct: 619 YKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK 678
Query: 426 MGKLGEAEKCFLEMIEKG 443
K EA + F +M +G
Sbjct: 679 RKKFLEAREVFDQMRREG 696
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 164/368 (44%), Gaps = 13/368 (3%)
Query: 95 KGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMV--VLARTAKVCS 152
KG+ S T++ R + +W L+ + K + P + + ++ ++C
Sbjct: 275 KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG---LKPNSYIYGSIIGLLCRICK 331
Query: 153 VRQTVEFFRRF--KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTF 209
+ + E F + ++PD T + L+ C+ + A ++ + + P++ T+
Sbjct: 332 LAEAEEAFSEMIRQGILPD--TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTY 389
Query: 210 NILLSGWKTPED---AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRE 266
++SG+ D A F +M G+ PD VT+ L++ YCK ++ A++V + M +
Sbjct: 390 TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 449
Query: 267 RDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLRE 326
SP+V+TYT++I GL G D A ++L EM + G P++ YN+ + C + + E
Sbjct: 450 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 509
Query: 327 AYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIR 386
A LV E + GLN + TY + S ++ + + M+G G P + L+
Sbjct: 510 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 569
Query: 387 LFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKP 446
F +E +L M+ KG + L C L A + +M +G P
Sbjct: 570 GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGP 629
Query: 447 SNVSFRRI 454
++ +
Sbjct: 630 DGKTYENL 637
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 125/251 (49%), Gaps = 4/251 (1%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGW---KTPEDAEVFFKKMR 230
+ L+ LC+E + A + H + K +PN+ T+N +++G E+A +
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
G+ D VTY +L+D YCK E++KA ++L EM + L P ++T+ ++ G L G +
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
+L M G P+ +N+ ++ +CI L+ A + +M S+G+ P+ TY
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG 410
+ + +++ +W ++ M G G + + LI+ F K++K A +++ M +G
Sbjct: 639 KGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLA 698
Query: 411 SYTLVSDVLFD 421
+ + D D
Sbjct: 699 ADKEIFDFFSD 709
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 115/530 (21%), Positives = 208/530 (39%), Gaps = 87/530 (16%)
Query: 1 MLLKRCTFQSQSTFLPAPNLILSRLLSSTLNDGDVHRVMTIITTTSSPENLRQSLKSSGV 60
+L+KR T S F+ +L L STL D T P+ S K + V
Sbjct: 8 LLMKRGTLSSFRNFIQLFSLQSRGLSFSTLTD-----------TRPFPD---YSPKKASV 53
Query: 61 FLSNELIDQVLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRM-FNH 119
E + Q+ ++ A P + R + F D ++++L + + +
Sbjct: 54 -RDTEFVHQITNVIKLRRAEPLR---------RSLKPYECKFKTDHLIWVLMKIKCDYRL 103
Query: 120 IWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQT-----------------VEFFRR 162
+ D AR + + + +++ LA +K V Q+ V+FF
Sbjct: 104 VLDFFDWARSRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDL 163
Query: 163 FKKLVPDF--DTNCFNALLRTLCQEKSMTDARNVYHS-LKHQFRPNLQTFNILLS----- 214
D+ D F+ + L + +AR V+ L + ++ + N+ L+
Sbjct: 164 LVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKD 223
Query: 215 GWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVI 274
+KT A + F++ E+GV +V +YN ++ C+ +++A+ +L M + +PDVI
Sbjct: 224 CYKTAT-AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVI 282
Query: 275 TYTSIIGGLGLVGQPDK-----------------------------------ARDVLKEM 299
+Y++++ G G+ DK A + EM
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 342
Query: 300 KEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDL 359
G PD Y I FC +R A EM S+ + P+ TY F D+
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 360 QSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVL 419
+ ++H M G P++ + LI + K ++ A ++ M++ G + L
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 420 FDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI-KVLMELANRHEALQ 468
D LC G L A + EM + G +P+ ++ I L + N EA++
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 512
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 144/280 (51%), Gaps = 4/280 (1%)
Query: 176 NALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTPE---DAEVFFKKMRE 231
N LL C+ ++ A + + K P++ TF LL+G+ + DA F +M
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179
Query: 232 MGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDK 291
MG P+VV YN+++D CK ++++ A +L+ M + + PDV+TY S+I GL G+
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSD 239
Query: 292 ARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFR 351
A ++ M + YPDV +NA I R+ EA + +EM + L+P+ TY+L
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIY 299
Query: 352 IFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGS 411
+ L + M+ M+ GC P+ + LI + K +KVE ++L+ +M ++G
Sbjct: 300 GLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR 359
Query: 412 YTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
T+ +L C GKL AE+ F M+ G P+ +++
Sbjct: 360 NTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITY 399
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 141/276 (51%), Gaps = 4/276 (1%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTP---EDAEVFFKKMR 230
+N ++ LC+ K + +A ++ + + K P++ T+N L+SG + DA M
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT 248
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
+ + PDV T+N+L+D K + +A + +EM R L PD++TY+ +I GL + + D
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD 308
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
+A ++ M GC+PDV Y+ I +C +K++ L EM+ +G+ N TY +
Sbjct: 309 EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILI 368
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG 410
+ + + L + ++ RM+ G HPN + L+ K+E AL + DM + G
Sbjct: 369 QGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMD 428
Query: 411 SYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKP 446
+ + +++ +C G++ +A + + +G P
Sbjct: 429 ADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMP 464
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 159/313 (50%), Gaps = 13/313 (4%)
Query: 105 DTMLYILGRSRMFNHIWDLL--IEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRR 162
+T++ L +S+ ++ DLL +E ++T +++ L + + + V +
Sbjct: 190 NTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTK 249
Query: 163 FKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSG---WKT 218
+++ PD T FNAL+ +E +++A Y + + P++ T+++L+ G +
Sbjct: 250 -REIYPDVFT--FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR 306
Query: 219 PEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTS 278
++AE F M G PDVVTY+ L++ YCK +++E K+ EM +R + + +TYT
Sbjct: 307 LDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTI 366
Query: 279 IIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKG 338
+I G G+ + A ++ + M G +P++ YN + C ++ +A ++ +M G
Sbjct: 367 LIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNG 426
Query: 339 LNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPN--TQSCMFLIRLFKKQEKVEM 396
++ + TYN+ R + ++ +W++Y + G P+ T + M L L+KK + E
Sbjct: 427 MDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMML-GLYKKGLRRE- 484
Query: 397 ALQLWGDMVEKGF 409
A L+ M E G
Sbjct: 485 ADALFRKMKEDGI 497
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 17/274 (6%)
Query: 120 IWDLLIEARWKDQT----LITPR-------TVMVVLARTAKVCSVRQTVEFFRRFKKLVP 168
I L RW D T +T R T ++ K V + EF+ +
Sbjct: 228 ISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL 287
Query: 169 DFDTNCFNALLRTLCQEKSMTDARNVYHSL--KHQFRPNLQTFNILLSGW---KTPEDAE 223
D D ++ L+ LC + +A ++ + K F P++ T++IL++G+ K E
Sbjct: 288 DPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCF-PDVVTYSILINGYCKSKKVEHGM 346
Query: 224 VFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGL 283
F +M + GV + VTY L+ YC+ +L A ++ M + P++ITY ++ GL
Sbjct: 347 KLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGL 406
Query: 284 GLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNA 343
G+ +KA +L +M++ G D+ YN IR C A + +A+D+ + +GL P+
Sbjct: 407 CDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDI 466
Query: 344 TTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPN 377
TY Y + + ++ +M G PN
Sbjct: 467 WTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/260 (19%), Positives = 105/260 (40%), Gaps = 38/260 (14%)
Query: 195 YHSLKHQFRPNLQTFNILLSGWKTPEDAEV---FFKKMREMGVTPDVVTYNSLVDVYCKG 251
+H ++ + P++ F+ LLS + +V +++M+ +G+ ++ T N L++ +C+
Sbjct: 70 FHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRC 129
Query: 252 RELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAY 311
+L A L +M + P ++T+ S+
Sbjct: 130 SQLSLALSFLGKMIKLGHEPSIVTFGSL-------------------------------- 157
Query: 312 NAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMG 371
+ FC R+ +A + D+M G PN YN S + ++ ++ +RM
Sbjct: 158 ---LNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEK 214
Query: 372 LGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGE 431
G P+ + LI + A ++ M ++ + L D G++ E
Sbjct: 215 DGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSE 274
Query: 432 AEKCFLEMIEKGQKPSNVSF 451
AE+ + EMI + P V++
Sbjct: 275 AEEFYEEMIRRSLDPDIVTY 294
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 179/375 (47%), Gaps = 19/375 (5%)
Query: 135 ITPRTVMVV----LARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTD 190
I P T ++ L +T K + + +E VPD T +N ++ C+ + +
Sbjct: 137 IIPCTTLIRGFCRLGKTRKAAKILEILEG----SGAVPDVIT--YNVMISGYCKAGEINN 190
Query: 191 ARNVYHSLKHQFRPNLQTFNILL----SGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVD 246
A +V + P++ T+N +L K + EV +M + PDV+TY L++
Sbjct: 191 ALSVLDRM--SVSPDVVTYNTILRSLCDSGKLKQAMEVL-DRMLQRDCYPDVITYTILIE 247
Query: 247 VYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYP 306
C+ + A K+LDEMR+R +PDV+TY ++ G+ G+ D+A L +M GC P
Sbjct: 248 ATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQP 307
Query: 307 DVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMY 366
+V +N +R+ C R +A L+ +M KG +P+ T+N+ L + ++
Sbjct: 308 NVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDIL 367
Query: 367 HRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDM 426
+M GC PN+ S L+ F K++K++ A++ MV +G + + + LC
Sbjct: 368 EKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKD 427
Query: 427 GKLGEAEKCFLEMIEKGQKPSNVSFRR-IKVLMELANRHEALQNLTQKMAVFGRPVQVRE 485
GK+ +A + ++ KG P +++ I L + +A++ L + A +P +
Sbjct: 428 GKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY 487
Query: 486 SRPVQVHESRESAID 500
S V SRE +D
Sbjct: 488 SSLVG-GLSREGKVD 501
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 168/388 (43%), Gaps = 56/388 (14%)
Query: 111 LGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDF 170
LG++R I ++L E +IT V+++ K + + R + PD
Sbjct: 150 LGKTRKAAKILEIL-EGSGAVPDVITYN---VMISGYCKAGEINNALSVLDRMS-VSPDV 204
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHS-LKHQFRPNLQTFNILLSGWKTPEDAEV----- 224
T +N +LR+LC + A V L+ P++ T+ IL+ T D+ V
Sbjct: 205 VT--YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEA--TCRDSGVGHAMK 260
Query: 225 FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGL- 283
+MR+ G TPDVVTYN LV+ CK L++A K L++M P+VIT+ I+ +
Sbjct: 261 LLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC 320
Query: 284 -------------------------------------GLVGQPDKARDVLKEMKEYGCYP 306
GL+G +A D+L++M ++GC P
Sbjct: 321 STGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLG---RAIDILEKMPQHGCQP 377
Query: 307 DVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMY 366
+ +YN + FC K++ A + ++ M S+G P+ TYN ++ + +
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 367 HRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDM 426
+++ GC P + +I K K A++L +M K T+ L L
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497
Query: 427 GKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
GK+ EA K F E G +P+ V+F I
Sbjct: 498 GKVDEAIKFFHEFERMGIRPNAVTFNSI 525
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 117/239 (48%), Gaps = 4/239 (1%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGW---KTPEDAEVFFKKMR 230
FN L+ LC++ + A ++ + +H +PN ++N LL G+ K + A + ++M
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
G PD+VTYN+++ CK ++E A ++L+++ + SP +ITY ++I GL G+
Sbjct: 407 SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTG 466
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
KA +L EM+ PD Y++ + ++ EA E G+ PNA T+N
Sbjct: 467 KAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIM 526
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGF 409
S + + M+ GC PN S LI + + AL+L ++ KG
Sbjct: 527 LGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 145/337 (43%), Gaps = 9/337 (2%)
Query: 113 RSRMFNHIWDLLIEARWKDQTLITPRTVM--VVLARTAKVCSVRQTVEFFRRFKKLVPDF 170
R H LL E R + TP V V++ K + + ++F
Sbjct: 251 RDSGVGHAMKLLDEMRDRG---CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQP 307
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHS-LKHQFRPNLQTFNIL---LSGWKTPEDAEVFF 226
+ N +LR++C DA + L+ F P++ TFNIL L A
Sbjct: 308 NVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDIL 367
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
+KM + G P+ ++YN L+ +CK +++++A + L+ M R PD++TY +++ L
Sbjct: 368 EKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKD 427
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
G+ + A ++L ++ GC P + YN I A + +A L+DEM +K L P+ TY
Sbjct: 428 GKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY 487
Query: 347 NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE 406
+ + + +H +G PN + ++ K + + A+ M+
Sbjct: 488 SSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMIN 547
Query: 407 KGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKG 443
+G +L + L G EA + E+ KG
Sbjct: 548 RGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 117/248 (47%), Gaps = 5/248 (2%)
Query: 207 QTFNILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRE 266
Q F L SG+ + + + DV + N L + G ELE+ +K L+ M
Sbjct: 73 QKFETLSSGYSN-SNGNGHYSSVNSSFALEDVESNNHLRQMVRTG-ELEEGFKFLENMVY 130
Query: 267 RDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLRE 326
PD+I T++I G +G+ KA +L+ ++ G PDV YN I +C A +
Sbjct: 131 HGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINN 190
Query: 327 AYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIR 386
A ++D M+ ++P+ TYN R S L+ + + RM+ C+P+ + LI
Sbjct: 191 ALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIE 247
Query: 387 LFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKP 446
+ V A++L +M ++G + +VL + +C G+L EA K +M G +P
Sbjct: 248 ATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQP 307
Query: 447 SNVSFRRI 454
+ ++ I
Sbjct: 308 NVITHNII 315
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 118/255 (46%), Gaps = 15/255 (5%)
Query: 94 RKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMV--VLARTAKVC 151
RKGF + + + ++ L R + D+L Q P ++ +L K
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGLLGRAIDIL---EKMPQHGCQPNSLSYNPLLHGFCKEK 393
Query: 152 SVRQTVEFFRRF--KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQT 208
+ + +E+ R + PD T +N +L LC++ + DA + + L + P L T
Sbjct: 394 KMDRAIEYLERMVSRGCYPDIVT--YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 451
Query: 209 FNILLSG----WKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEM 264
+N ++ G KT + A +MR + PD +TY+SLV + ++++A K E
Sbjct: 452 YNTVIDGLAKAGKTGK-AIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEF 510
Query: 265 RERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRL 324
+ P+ +T+ SI+ GL Q D+A D L M GC P+ +Y I
Sbjct: 511 ERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMA 570
Query: 325 REAYDLVDEMTSKGL 339
+EA +L++E+ +KGL
Sbjct: 571 KEALELLNELCNKGL 585
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 176/363 (48%), Gaps = 11/363 (3%)
Query: 96 GFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWK---DQTLITPRTVMVVLARTAKVCS 152
G H +++ M+ R + + +L A WK + IT T++ +V
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRA-WKLGYEPDTITFSTLVNGFCLEGRVSE 158
Query: 153 VRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNI 211
V+ K+ PD T + L+ LC + +++A + + ++ F+P+ T+
Sbjct: 159 AVALVDRMVEMKQR-PDLVT--VSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 215
Query: 212 LLSGWKTPEDAEV---FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERD 268
+L+ ++ + F+KM E + VV Y+ ++D CK + A + +EM +
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275
Query: 269 LSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAY 328
+ DV+TY+S+IGGL G+ D +L+EM PDV ++A I F +L EA
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335
Query: 329 DLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLF 388
+L +EM ++G+ P+ TYN F N L + M+ M+ GC P+ + LI +
Sbjct: 336 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 395
Query: 389 KKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSN 448
K ++V+ ++L+ ++ KG T+ + L C GKL A++ F EM+ +G PS
Sbjct: 396 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 455
Query: 449 VSF 451
V++
Sbjct: 456 VTY 458
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 164/348 (47%), Gaps = 39/348 (11%)
Query: 143 VLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ- 201
VL R K + ++ FR+ ++ ++ ++ +LC++ S DA ++++ ++ +
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275
Query: 202 FRPNLQTFNILLSGWKTPEDAEVFFKKMREM---GVTPDVVTYNSLVDVYCKGRELEKAY 258
+ ++ T++ L+ G + K +REM + PDVVT+++L+DV+ K +L +A
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335
Query: 259 KVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNF 318
++ +EM R ++PD ITY S+I G +A + M GC PD+ Y+ I ++
Sbjct: 336 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 395
Query: 319 CIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNT 378
C AKR+ + L E++SKGL PN TYN F S L ++ ++ M+ G P+
Sbjct: 396 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 455
Query: 379 QSCMFLI-------------RLFKKQEKVEMAL----------------------QLWGD 403
+ L+ +F+K +K M L L+
Sbjct: 456 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS 515
Query: 404 MVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+ +KG + +V+ LC G L EA+ F +M E G P + ++
Sbjct: 516 LSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTY 563
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 140/279 (50%), Gaps = 8/279 (2%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGW---KTPEDAEVFF 226
D + +L LC+ + A +++ ++ + + ++ ++I++ + +DA F
Sbjct: 209 DEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLF 268
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
+M G+ DVVTY+SL+ C + + K+L EM R++ PDV+T++++I
Sbjct: 269 NEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKE 328
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
G+ +A+++ EM G PD YN+ I FC L EA + D M SKG P+ TY
Sbjct: 329 GKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTY 388
Query: 347 NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE 406
++ + + + ++ + G PNT + L+ F + K+ A +L+ +MV
Sbjct: 389 SILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS 448
Query: 407 KGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQK 445
+G + +L D LCD G+L +A LE+ EK QK
Sbjct: 449 RGVPPSVVTYGILLDGLCDNGELNKA----LEIFEKMQK 483
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 140/274 (51%), Gaps = 8/274 (2%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGW---KTPEDAEVFF 226
DT +N+L+ C+E + +A ++ + + P++ T++IL++ + K +D F
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 408
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
+++ G+ P+ +TYN+LV +C+ +L A ++ EM R + P V+TY ++ GL
Sbjct: 409 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN 468
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
G+ +KA ++ ++M++ + YN I C A ++ +A+ L ++ KG+ P+ TY
Sbjct: 469 GELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTY 528
Query: 347 NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE 406
N+ L + ++ +M GC P+ + LIR + +++L +M
Sbjct: 529 NVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKV 588
Query: 407 KGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMI 440
GF + + ++ D+L D +K FL+M+
Sbjct: 589 CGFSADSSTIKMVIDMLSDR----RLDKSFLDML 618
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 121/277 (43%), Gaps = 4/277 (1%)
Query: 179 LRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTPEDAEV---FFKKMREMGV 234
LR + + DA +++ S+ + + P FN L S + ++ F K M G+
Sbjct: 42 LRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGI 101
Query: 235 TPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARD 294
D+ T +++ YC+ ++L A+ VL + PD IT+++++ G L G+ +A
Sbjct: 102 EHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVA 161
Query: 295 VLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFY 354
++ M E PD+ + I C+ R+ EA L+D M G P+ TY
Sbjct: 162 LVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLC 221
Query: 355 WSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTL 414
S + + +++ +M + +I K + AL L+ +M KG + +
Sbjct: 222 KSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVV 281
Query: 415 VSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
L LC+ GK + K EMI + P V+F
Sbjct: 282 TYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTF 318
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 182/400 (45%), Gaps = 17/400 (4%)
Query: 21 ILSRLLSSTLNDGDVHRVMTIITTTSSPENLRQSLKSSGVFLSNELIDQVLKRV--RFSH 78
+ SR L S + RV+ + S N + L V +S L+ +VL + S+
Sbjct: 65 VRSRFLESA--NHSASRVLVTLQLDESGFNSKSVLDELNVRVSGLLVREVLVGILRNLSY 122
Query: 79 ANPSQTLE----FYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTL 134
N ++ + F+ ++G ++ F HT S ++ I + +W L ++ +D
Sbjct: 123 DNKARCAKLAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRL-VDEMVQDGFP 181
Query: 135 ITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNV 194
T RT +++ + +Q V F + K + +NA+L +L K V
Sbjct: 182 TTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWV 241
Query: 195 YHS-LKHQFRPNLQTFNILLSGWKTPEDAEV-----FFKKMREMGVTPDVVTYNSLVDVY 248
Y L+ F P++ T+NILL W ++ F +M G +PD TYN L+ +
Sbjct: 242 YKQMLEDGFSPDVLTYNILL--WTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHIL 299
Query: 249 CKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDV 308
KG + A L+ M+E + P V+ YT++I GL G + + L EM + GC PDV
Sbjct: 300 GKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDV 359
Query: 309 PAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHR 368
Y I + ++ L +A ++ EMT KG PN TYN R + + + + +
Sbjct: 360 VCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKE 419
Query: 369 MMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKG 408
M GC+PN L+ +K K+ A ++ +MV+KG
Sbjct: 420 MESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 103/243 (42%), Gaps = 2/243 (0%)
Query: 238 VVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLK 297
V +Y+ L+ ++ + E + ++++DEM + T+ +I G G +A
Sbjct: 149 VNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFM 208
Query: 298 EMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSN 357
+ K + P +YNA + + K+ + + +M G +P+ TYN+ Y
Sbjct: 209 KSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLG 268
Query: 358 DLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSD 417
+ ++ M G P++ + L+ + K K AL M E G L
Sbjct: 269 KMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYT 328
Query: 418 VLFDLLCDMGKLGEAEKCFL-EMIEKGQKPSNVSFRRIKVLMELANRHEALQNLTQKMAV 476
L D L G L EA K FL EM++ G +P V + + ++ + + + ++M V
Sbjct: 329 TLIDGLSRAGNL-EACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTV 387
Query: 477 FGR 479
G+
Sbjct: 388 KGQ 390
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 176/365 (48%), Gaps = 11/365 (3%)
Query: 95 KGFFHTAFSLDTMLYILGRSRMFNHIWDLL---IEARWKDQTLITPRTVMVVLARTAKVC 151
KG H ++L M+ R R + + + I+ ++ T +T T++ L +V
Sbjct: 101 KGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDT-VTFSTLINGLCLEGRV- 158
Query: 152 SVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFN 210
+ +E R ++ NAL+ LC ++DA + + + F+PN T+
Sbjct: 159 --SEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYG 216
Query: 211 -ILLSGWKTPEDAEV--FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRER 267
+L K+ + A +KM E + D V Y+ ++D CK L+ A+ + +EM +
Sbjct: 217 PVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 276
Query: 268 DLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREA 327
D+I YT++I G G+ D +L++M + PDV A++A I F +LREA
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336
Query: 328 YDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRL 387
+L EM +G++P+ TY F N L + +M M+ GC PN ++ LI
Sbjct: 337 EELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILING 396
Query: 388 FKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPS 447
+ K ++ L+L+ M +G + T+ + L C++GKL A++ F EM+ + +P
Sbjct: 397 YCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPD 456
Query: 448 NVSFR 452
VS++
Sbjct: 457 IVSYK 461
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 139/274 (50%), Gaps = 8/274 (2%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKTP---EDAEVFF 226
DT + +L+ C+E + A ++ + + PN++TFNIL++G+ +D F
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
+KM GV D VTYN+L+ +C+ +LE A ++ EM R + PD+++Y ++ GL
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
G+P+KA ++ +++++ D+ YN I C A ++ +A+DL + KG+ P+ TY
Sbjct: 471 GEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTY 530
Query: 347 NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE 406
N+ L + ++ +M G PN + LIR + + +L ++
Sbjct: 531 NIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKR 590
Query: 407 KGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMI 440
GF ++ D+L D G +K FL+M+
Sbjct: 591 CGFSVDASTVKMVVDMLSD----GRLKKSFLDML 620
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 162/344 (47%), Gaps = 42/344 (12%)
Query: 150 VCSVRQT---VEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPN 205
+C QT +E R+ ++ D ++ ++ LC++ S+ +A N+++ ++ + F+ +
Sbjct: 222 MCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 281
Query: 206 LQTFNILLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLD 262
+ + L+ G+ +D + M + +TPDVV +++L+D + K +L +A ++
Sbjct: 282 IIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHK 341
Query: 263 EMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAK 322
EM +R +SPD +TYTS+I G Q DKA +L M GC P++ +N I +C A
Sbjct: 342 EMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKAN 401
Query: 323 RLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCM 382
+ + +L +M+ +G+ + TYN + F L+ + ++ M+ P+ S
Sbjct: 402 LIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYK 461
Query: 383 FLI-------------RLFKKQEKVEMALQLW-GDMVEKGFGSYTLVSD----------- 417
L+ +F+K EK +M L + +++ G + + V D
Sbjct: 462 ILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 521
Query: 418 ----------VLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
++ LC G L EA+ F +M E G P+ ++
Sbjct: 522 GVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTY 565
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 122/266 (45%), Gaps = 4/266 (1%)
Query: 190 DARNVYHSL-KHQFRPNLQTFNILLSGWKTPEDAEVFF---KKMREMGVTPDVVTYNSLV 245
DA +++ + + + RP L F+ L S + ++ K+M G+ ++ T + ++
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 246 DVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCY 305
+ C+ R+L A+ + ++ + PD +T++++I GL L G+ +A +++ M E G
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 306 PDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNM 365
P + NA + C+ ++ +A L+D M G PN TY ++ S + +
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 366 YHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCD 425
+M + +I K ++ A L+ +M KGF + ++ L C
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 426 MGKLGEAEKCFLEMIEKGQKPSNVSF 451
G+ + K +MI++ P V+F
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAF 320
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 85/190 (44%), Gaps = 6/190 (3%)
Query: 288 QPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLRE---AYDLVDEMTSKGLNPNAT 344
+ D A D+ +EM P + ++ R F + R ++ DL +M KG+ N
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFS---RLFSVVARTKQYDLVLDLCKQMELKGIAHNLY 108
Query: 345 TYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDM 404
T ++ L +++ +++ LG P+T + LI + +V AL+L M
Sbjct: 109 TLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRM 168
Query: 405 VEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRH 464
VE G + + L + LC GK+ +A M+E G +P+ V++ + +M + +
Sbjct: 169 VEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQT 228
Query: 465 EALQNLTQKM 474
L +KM
Sbjct: 229 ALAMELLRKM 238
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 184/387 (47%), Gaps = 24/387 (6%)
Query: 81 PSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLL--IEARWKDQTLITPR 138
P+ L F+ + KGF H S ML LGR+R N + L IE R + R
Sbjct: 81 PADGLRFFDWVSN-KGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDR 139
Query: 139 TVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL 198
++ +++V+ F+ K++ FN+LL L + A +++ +
Sbjct: 140 YFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEM 199
Query: 199 KHQF--RPNLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRE 253
+ + P+ TFN L++G+ ++A FK M PDVVTYN+++D C+ +
Sbjct: 200 RRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGK 259
Query: 254 LEKAYKVLDEMRER--DLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAY 311
++ A+ VL M ++ D+ P+V++YT+++ G + + D+A V +M G P+ Y
Sbjct: 260 VKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTY 319
Query: 312 NAAIRNFCIAKRLREAYDLV----DEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYH 367
N I+ A R E D++ D T+ P+A T+N+ + + L ++ ++
Sbjct: 320 NTLIKGLSEAHRYDEIKDILIGGNDAFTT--FAPDACTFNILIKAHCDAGHLDAAMKVFQ 377
Query: 368 RMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGF-------GSYTLVSDVLF 420
M+ + HP++ S LIR + + + A L+ ++ EK + +F
Sbjct: 378 EMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMF 437
Query: 421 DLLCDMGKLGEAEKCFLEMIEKG-QKP 446
+ LC GK +AEK F +++++G Q P
Sbjct: 438 EYLCANGKTKQAEKVFRQLMKRGVQDP 464
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 89/428 (20%), Positives = 171/428 (39%), Gaps = 56/428 (13%)
Query: 95 KGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVLART-AKVCSV 153
+G A + +T++ L + ++ I D+LI T +L + +
Sbjct: 310 RGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHL 369
Query: 154 RQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL--------KHQFRPN 205
++ F+ + D+ ++ L+RTLC A +++ L K + +P
Sbjct: 370 DAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPL 429
Query: 206 LQTFN----ILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVL 261
+N L + KT + AE F+++ + GV D +Y +L+ +C+ + + AY++L
Sbjct: 430 AAAYNPMFEYLCANGKTKQ-AEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELL 487
Query: 262 DEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIA 321
M R+ PD+ TY +I GL +G+ A D L+ M P +++ +
Sbjct: 488 VLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKR 547
Query: 322 KRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSC 381
K E++ LV M K + N R+ + S + ++
Sbjct: 548 KFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAF------------------ 589
Query: 382 MFLIRLFKKQEKVEMALQLWGDMVE--KGFGSYTLV--------------SDVLFDLLCD 425
++RL + +L G + E K ++TLV + + + LC
Sbjct: 590 -LIVRLLYDNGYLVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCK 648
Query: 426 MGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEALQNLTQKMAVFGRPVQVRE 485
+ EA + E++E G ++ +E A + E LQ ++++MA +RE
Sbjct: 649 HKRHSEAFSLYNELVELGNHQQLSCHVVLRNALEAAGKWEELQFVSKRMAT------LRE 702
Query: 486 SRPVQVHE 493
S V E
Sbjct: 703 SDDCSVLE 710
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 137/281 (48%), Gaps = 4/281 (1%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTP---EDAEVFFKKMR 230
+N ++ LC+ + + +A V++ + K R + T+N L+SG DA + M
Sbjct: 187 YNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMV 246
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
+ + P+V+ + +L+D + K L +A + EM R + P+V TY S+I G + G
Sbjct: 247 KRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLG 306
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
A+ + M GC+PDV YN I FC +KR+ + L EMT +GL +A TYN
Sbjct: 307 DAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLI 366
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG 410
+ + L + +++RM+ G P+ + L+ K+E AL + D+ +
Sbjct: 367 HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD 426
Query: 411 SYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+ +++ LC KL EA F + KG KP +++
Sbjct: 427 VDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAY 467
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 145/313 (46%), Gaps = 4/313 (1%)
Query: 143 VLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQ 201
VL AK+ + + + + L D F L+ C+ ++ A + + K
Sbjct: 85 VLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLG 144
Query: 202 FRPNLQTFNILLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAY 258
FRP++ T LL+G+ ++A M G P+VV YN++++ CK R+L A
Sbjct: 145 FRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNAL 204
Query: 259 KVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNF 318
+V M ++ + D +TY ++I GL G+ A +L++M + P+V + A I F
Sbjct: 205 EVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF 264
Query: 319 CIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNT 378
L EA +L EM + + PN TYN F L + M+ M+ GC P+
Sbjct: 265 VKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDV 324
Query: 379 QSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLE 438
+ LI F K ++VE ++L+ +M +G + L C GKL A+K F
Sbjct: 325 VTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 384
Query: 439 MIEKGQKPSNVSF 451
M++ G P V++
Sbjct: 385 MVDCGVSPDIVTY 397
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 121/239 (50%), Gaps = 4/239 (1%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGW---KTPEDAEVFFKKMR 230
F AL+ T +E ++ +ARN+Y + + PN+ T+N L++G+ DA+ F M
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
G PDVVTYN+L+ +CK + +E K+ EM + L D TY ++I G G+ +
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 376
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
A+ V M + G PD+ YN + C ++ +A +V+++ ++ + TYN+
Sbjct: 377 VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 436
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGF 409
+ ++ L+ +W ++ + G P+ + + +I ++ A +L M E GF
Sbjct: 437 QGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGF 495
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 6/197 (3%)
Query: 164 KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKTPED- 221
K PD T +N L+ C+ K + D ++ + +Q + T+N L+ G+
Sbjct: 318 KGCFPDVVT--YNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 375
Query: 222 --AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
A+ F +M + GV+PD+VTYN L+D C ++EKA +++++++ ++ D+ITY I
Sbjct: 376 NVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNII 435
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
I GL + +A + + + G PD AY I C REA L M G
Sbjct: 436 IQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGF 495
Query: 340 NPNATTYNLFFRIFYWS 356
P+ Y+ R Y S
Sbjct: 496 MPSERIYDETLRDHYTS 512
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 96/235 (40%)
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
+DA F +M + P +V + ++ V K + + + +M +S D+ ++T +
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
I + A +L +M + G P + + + FC R +EA LVD M G
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180
Query: 340 NPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQ 399
PN YN + DL ++ +++ M G + + LI + A +
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 400 LWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
L DMV++ + L D G L EA + EMI + P+ ++ +
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 295
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 98/223 (43%), Gaps = 2/223 (0%)
Query: 253 ELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYN 312
+ + A+ + EM + P ++ +T ++ + + + D + +M+ G D+ ++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 313 AAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGL 372
I FC RL A L+ +M G P+ T F N Q + ++ M G
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 373 GCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEA 432
G PN +I K + AL+++ M +KG + + + L L + G+ +A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 433 EKCFLEMIEKGQKPSNVSFRR-IKVLMELANRHEALQNLTQKM 474
+ +M+++ P+ + F I ++ N EA +NL ++M
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEA-RNLYKEM 280
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 144/285 (50%), Gaps = 5/285 (1%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSG---WKTPEDAEVFFKKMR 230
+N L++ L + + +A + + + + P +QTFNIL++G DA+ K M
Sbjct: 394 YNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI 453
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
G PD+ T+N L+ Y ++E A ++LD M + + PDV TY S++ GL + +
Sbjct: 454 SKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFE 513
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
+ K M E GC P++ +N + + C ++L EA L++EM +K +NP+A T+
Sbjct: 514 DVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLI 573
Query: 351 RIFYWSNDLQSSWNMYHRM-MGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGF 409
F + DL ++ ++ +M +T + +I F ++ V MA +L+ +MV++
Sbjct: 574 DGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCL 633
Query: 410 GSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
G ++ D C G + K LEM+E G PS + R+
Sbjct: 634 GPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRV 678
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 127/289 (43%), Gaps = 6/289 (2%)
Query: 168 PDFDTNCFNALLRTLCQEKSMTDARNVYHS--LKHQFRPNLQTFNILLSGW---KTPEDA 222
P D +N L+ LC+ +A VY + P+ T+N L++G+ + A
Sbjct: 282 PKPDVITYNNLIYGLCKNSKFQEAE-VYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLA 340
Query: 223 EVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGG 282
E G PD TY SL+D C E +A + +E + + P+VI Y ++I G
Sbjct: 341 ERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKG 400
Query: 283 LGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPN 342
L G +A + EM E G P+V +N + C + +A LV M SKG P+
Sbjct: 401 LSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPD 460
Query: 343 ATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWG 402
T+N+ + ++++ + M+ G P+ + L+ K K E ++ +
Sbjct: 461 IFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYK 520
Query: 403 DMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
MVEKG ++L + LC KL EA EM K P V+F
Sbjct: 521 TMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTF 569
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 148/352 (42%), Gaps = 45/352 (12%)
Query: 158 EFFRRFKKLVPDFDTNC---FNALLRTLCQEKSMTDARNVYHS-LKHQFRPNLQTFNILL 213
E + F K++ + C FN LLR LC++ + + + +K PNL T+N+ +
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI 258
Query: 214 SGW--KTPEDAEV-FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLS 270
G + D V + E G PDV+TYN+L+ CK + ++A L +M L
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLE 318
Query: 271 PDVITYTSIIGGL---GLV--------------------------------GQPDKARDV 295
PD TY ++I G G+V G+ ++A +
Sbjct: 319 PDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALAL 378
Query: 296 LKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYW 355
E G P+V YN I+ + EA L +EM+ KGL P T+N+
Sbjct: 379 FNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCK 438
Query: 356 SNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLV 415
+ + + M+ G P+ + LI + Q K+E AL++ M++ G
Sbjct: 439 MGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYT 498
Query: 416 SDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEAL 467
+ L + LC K + + + M+EKG P+ +F +L+E R+ L
Sbjct: 499 YNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFN---ILLESLCRYRKL 547
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 136/305 (44%), Gaps = 48/305 (15%)
Query: 164 KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTP--- 219
K L+P+ T FN L+ LC+ ++DA + + + P++ TFNIL+ G+ T
Sbjct: 420 KGLIPEVQT--FNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKM 477
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKG---------------------------- 251
E+A M + GV PDV TYNSL++ CK
Sbjct: 478 ENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNIL 537
Query: 252 -------RELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKE-YG 303
R+L++A +L+EM+ + ++PD +T+ ++I G G D A + ++M+E Y
Sbjct: 538 LESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYK 597
Query: 304 CYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSW 363
P YN I F + A L EM + L P+ TY L F + ++ +
Sbjct: 598 VSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGY 657
Query: 364 NMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLL 423
MM G P+ + +I +++V A + MV+KG LV + + + +
Sbjct: 658 KFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKG-----LVPEAV-NTI 711
Query: 424 CDMGK 428
CD+ K
Sbjct: 712 CDVDK 716
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 124/275 (45%), Gaps = 4/275 (1%)
Query: 171 DTNCFNALLRTLCQEKSMTDA-RNVYHSLKHQFRPNLQTFNILLSGWKTPED---AEVFF 226
D+ +N L+ C+ + A R V ++ + F P+ T+ L+ G + A F
Sbjct: 320 DSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALF 379
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
+ G+ P+V+ YN+L+ + +A ++ +EM E+ L P+V T+ ++ GL +
Sbjct: 380 NEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKM 439
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
G A ++K M G +PD+ +N I + ++ A +++D M G++P+ TY
Sbjct: 440 GCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTY 499
Query: 347 NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE 406
N ++ + Y M+ GC PN + L+ + K++ AL L +M
Sbjct: 500 NSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKN 559
Query: 407 KGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIE 441
K + L D C G L A F +M E
Sbjct: 560 KSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEE 594
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 158/379 (41%), Gaps = 4/379 (1%)
Query: 80 NPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRT 139
+P + LE + + GF HT + +++ LG F + ++L++ R +
Sbjct: 19 DPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGV 78
Query: 140 VMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLK 199
+ + + V++ V F R + +NA++ L A VY ++
Sbjct: 79 YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMR 138
Query: 200 HQ-FRPNLQTFNILLSGW-KT--PEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELE 255
+ P++ +F I + + KT P A M G +VV Y ++V + +
Sbjct: 139 DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKA 198
Query: 256 KAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAI 315
+ Y++ +M +S + T+ ++ L G + +L ++ + G P++ YN I
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI 258
Query: 316 RNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCH 375
+ C L A +V + +G P+ TYN ++ Q + +M+ G
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLE 318
Query: 376 PNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKC 435
P++ + LI + K V++A ++ GD V GF L D LC G+ A
Sbjct: 319 PDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALAL 378
Query: 436 FLEMIEKGQKPSNVSFRRI 454
F E + KG KP+ + + +
Sbjct: 379 FNEALGKGIKPNVILYNTL 397
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 108/235 (45%), Gaps = 6/235 (2%)
Query: 217 KTPEDAEVFFKKMR-EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVI- 274
K P A F MR E+G + TY S+++ + E +VL +MRE ++ ++
Sbjct: 18 KDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRE-NVGNHMLE 76
Query: 275 -TYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDE 333
Y + G G+ +A +V + M Y C P V +YNA + + +A+ +
Sbjct: 77 GVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMR 136
Query: 334 MTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQS-CMFLIRLFKKQE 392
M +G+ P+ ++ + + F ++ ++ + + M GC N + C + +++
Sbjct: 137 MRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENF 196
Query: 393 KVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPS 447
K E +L+G M+ G + L +LC G + E EK ++I++G P+
Sbjct: 197 KAE-GYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPN 250
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 150/323 (46%), Gaps = 9/323 (2%)
Query: 131 DQTLITP--RTVMVVLARTAKVCSVRQTVEFFRRF--KKLVPDFDTNCFNALLRTLCQEK 186
++T I P T V++ C + E + K L+P+ T +NAL+ C+
Sbjct: 350 EETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT--YNALINGYCKRG 407
Query: 187 SMTDARNVYHSLK-HQFRPNLQTFNILLSGW--KTPEDAEVFFKKMREMGVTPDVVTYNS 243
+ DA +V ++ + PN +T+N L+ G+ A KM E V PDVVTYNS
Sbjct: 408 MIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNS 467
Query: 244 LVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYG 303
L+D C+ + AY++L M +R L PD TYTS+I L + ++A D+ +++ G
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG 527
Query: 304 CYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSW 363
P+V Y A I +C A ++ EA+ ++++M SK PN+ T+N L+ +
Sbjct: 528 VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEAT 587
Query: 364 NMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLL 423
+ +M+ +G P + LI K + A + M+ G
Sbjct: 588 LLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTY 647
Query: 424 CDMGKLGEAEKCFLEMIEKGQKP 446
C G+L +AE +M E G P
Sbjct: 648 CREGRLLDAEDMMAKMRENGVSP 670
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 145/305 (47%), Gaps = 8/305 (2%)
Query: 150 VCSVRQTVEFFRRFKKLVPD--FDT-NCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPN 205
+C R+ E F K+ D F T + L+++LC + ++A N+ ++ +PN
Sbjct: 298 LCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPN 357
Query: 206 LQTFNILLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLD 262
+ T+ +L+ + E A +M E G+ P+V+TYN+L++ YCK +E A V++
Sbjct: 358 IHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVE 417
Query: 263 EMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAK 322
M R LSP+ TY +I G KA VL +M E PDV YN+ I C +
Sbjct: 418 LMESRKLSPNTRTYNELIKGY-CKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSG 476
Query: 323 RLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCM 382
AY L+ M +GL P+ TY S ++ + +++ + G +PN
Sbjct: 477 NFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYT 536
Query: 383 FLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEK 442
LI + K KV+ A + M+ K +L + L LC GKL EA +M++
Sbjct: 537 ALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKI 596
Query: 443 GQKPS 447
G +P+
Sbjct: 597 GLQPT 601
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 142/284 (50%), Gaps = 5/284 (1%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKH-QFRPNLQTFNIL---LSGWKTPEDAEVFFKKMR 230
+ L+ LC + + +A +++ +K + P ++T+ +L L G + +A K+M
Sbjct: 291 YTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEME 350
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
E G+ P++ TY L+D C + EKA ++L +M E+ L P+VITY ++I G G +
Sbjct: 351 ETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIE 410
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
A DV++ M+ P+ YN I+ +C + +A ++++M + + P+ TYN
Sbjct: 411 DAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLI 469
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG 410
S + S++ + M G P+ + +I K ++VE A L+ + +KG
Sbjct: 470 DGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVN 529
Query: 411 SYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
++ L D C GK+ EA +M+ K P++++F +
Sbjct: 530 PNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNAL 573
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 178/412 (43%), Gaps = 53/412 (12%)
Query: 80 NPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDL-LIEARWKDQTLITPR 138
+P L F + + + H+ +S ++L +L + ++ + L+ + D
Sbjct: 102 DPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSV----G 157
Query: 139 TVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVY-HS 197
+ VL +C E F KL+ C+N LL +L + + + + VY
Sbjct: 158 DALYVL----DLCRKMNKDERFELKYKLI----IGCYNTLLNSLARFGLVDEMKQVYMEM 209
Query: 198 LKHQFRPNLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGREL 254
L+ + PN+ T+N +++G+ E+A + K+ E G+ PD TY SL+ YC+ ++L
Sbjct: 210 LEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDL 269
Query: 255 EKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAA 314
+ A+KV +EM + + + YT +I GL + + D+A D+ +MK+ C+P V Y
Sbjct: 270 DSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVL 329
Query: 315 IRNFCIAKRLREAYDLVDEMTS-----------------------------------KGL 339
I++ C ++R EA +LV EM KGL
Sbjct: 330 IKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGL 389
Query: 340 NPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQ 399
PN TYN + ++ + ++ M PNT++ LI+ + K V A+
Sbjct: 390 MPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMG 448
Query: 400 LWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+ M+E+ + + L D C G A + M ++G P ++
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTY 500
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 124/275 (45%), Gaps = 3/275 (1%)
Query: 201 QFRPNLQTFNILLSG---WKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKA 257
+++ + +N LL+ + ++ + + +M E V P++ TYN +V+ YCK +E+A
Sbjct: 178 KYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEA 237
Query: 258 YKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRN 317
+ + ++ E L PD TYTS+I G D A V EM GC + AY I
Sbjct: 238 NQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHG 297
Query: 318 FCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPN 377
C+A+R+ EA DL +M P TY + + S + N+ M G PN
Sbjct: 298 LCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPN 357
Query: 378 TQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFL 437
+ LI Q K E A +L G M+EKG + + L + C G + +A
Sbjct: 358 IHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVE 417
Query: 438 EMIEKGQKPSNVSFRRIKVLMELANRHEALQNLTQ 472
M + P+ ++ + +N H+A+ L +
Sbjct: 418 LMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNK 452
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 155/347 (44%), Gaps = 25/347 (7%)
Query: 164 KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKTP--- 219
+ LVPD T + +++ +LC+ K + +A +++ SL+ + PN+ + L+ G+
Sbjct: 491 RGLVPDQWT--YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKV 548
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
++A + +KM P+ +T+N+L+ C +L++A + ++M + L P V T T +
Sbjct: 549 DEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTIL 608
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
I L G D A ++M G PD Y I+ +C RL +A D++ +M G+
Sbjct: 609 IHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV 668
Query: 340 NPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIR-----LFKKQEKV 394
+P+ TY+ + + ++++ RM GC P+ + + LI+ + KQ+
Sbjct: 669 SPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGS 728
Query: 395 EMAL-------------QLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMI- 440
E L +L MVE + L +C++G L AEK F M
Sbjct: 729 EPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQR 788
Query: 441 EKGQKPSNVSFRRIKVLMELANRHEALQNLTQKMAVFGRPVQVRESR 487
+G PS + F + +H + M G Q+ +
Sbjct: 789 NEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCK 835
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 144/340 (42%), Gaps = 37/340 (10%)
Query: 111 LGRSRMFNH-IWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVR-----QTVEF---FR 161
L S FN I L + + K+ TL+ + V + L T ++ + +F +
Sbjct: 564 LPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYS 623
Query: 162 RFKKLVPDF---DTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWK 217
RF++++ D + + ++T C+E + DA ++ ++ P+L T++ L+ G+
Sbjct: 624 RFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYG 683
Query: 218 TPEDAEVFF---KKMREMGVTPDVVTYNSLVD-----VYCKGR-------------ELEK 256
F K+MR+ G P T+ SL+ Y K + E +
Sbjct: 684 DLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDT 743
Query: 257 AYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEM-KEYGCYPDVPAYNAAI 315
++L++M E ++P+ +Y +I G+ VG A V M + G P +NA +
Sbjct: 744 VVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALL 803
Query: 316 RNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCH 375
C K+ EA +VD+M G P + + Y + + +++ ++ G +
Sbjct: 804 SCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYY 863
Query: 376 PNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKG--FGSYT 413
+ + +I KQ VE +L+ M + G F S T
Sbjct: 864 EDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQT 903
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 174/366 (47%), Gaps = 13/366 (3%)
Query: 95 KGFFHTAFSLDTMLYILGRSRMFNHIWDLL---IEARWKDQTLITPRTVMVVLARTAKVC 151
KG H ++L M+ R R + + I+ ++ T IT T++ L +V
Sbjct: 117 KGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNT-ITFSTLINGLCLEGRV- 174
Query: 152 SVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTF- 209
+ +E R ++ D N L+ LC +A + + ++ +PN T+
Sbjct: 175 --SEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYG 232
Query: 210 ---NILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRE 266
N++ +T E+ +KM E + D V Y+ ++D CK L+ A+ + +EM
Sbjct: 233 PVLNVMCKSGQTALAMELL-RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEM 291
Query: 267 RDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLRE 326
+ ++ ++ITY +IGG G+ D +L++M + P+V ++ I +F +LRE
Sbjct: 292 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 351
Query: 327 AYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIR 386
A +L EM +G+ P+ TY F N L + M M+ GC PN ++ LI
Sbjct: 352 AEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 411
Query: 387 LFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKP 446
+ K +++ L+L+ M +G + T+ + L C++GKL A++ F EM+ + P
Sbjct: 412 GYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPP 471
Query: 447 SNVSFR 452
+ V+++
Sbjct: 472 NIVTYK 477
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 155/344 (45%), Gaps = 42/344 (12%)
Query: 150 VCSVRQT---VEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPN 205
+C QT +E R+ ++ D ++ ++ LC+ S+ +A N+++ ++ + N
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTN 297
Query: 206 LQTFNILLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLD 262
+ T+NIL+ G+ +D + M + + P+VVT++ L+D + K +L +A ++
Sbjct: 298 IITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHK 357
Query: 263 EMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAK 322
EM R ++PD ITYTS+I G DKA ++ M GC P++ +N I +C A
Sbjct: 358 EMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKAN 417
Query: 323 RLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCM 382
R+ + +L +M+ +G+ + TYN + F L + ++ M+ PN +
Sbjct: 418 RIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYK 477
Query: 383 FLI-------------RLFKKQEKVEMALQ----------------------LWGDMVEK 407
L+ +F+K EK +M L L+ + K
Sbjct: 478 ILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 537
Query: 408 GFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
G +++ LC G L EAE F +M E G P ++
Sbjct: 538 GVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTY 581
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 154/331 (46%), Gaps = 23/331 (6%)
Query: 127 ARWKD---------QTLITPRTVM--VVLARTAKVCSVRQTVEFFRRF--KKLVPDFDTN 173
RW D + I P V V++ K +R+ E + + + PD T
Sbjct: 312 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD--TI 369
Query: 174 CFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKTP---EDAEVFFKKM 229
+ +L+ C+E + A + + + PN++TFNIL++G+ +D F+KM
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 429
Query: 230 REMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQP 289
GV D VTYN+L+ +C+ +L A ++ EM R + P+++TY ++ GL G+
Sbjct: 430 SLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGES 489
Query: 290 DKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLF 349
+KA ++ +++++ D+ YN I C A ++ +A+DL + KG+ P TYN+
Sbjct: 490 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIM 549
Query: 350 FRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGF 409
L + ++ +M G P+ + LIR +++L ++ GF
Sbjct: 550 IGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGF 609
Query: 410 GSYTLVSDVLFDLLCDMGKLGEAEKCFLEMI 440
++ D+L D G +K FL+M+
Sbjct: 610 SVDASTIKMVIDMLSD----GRLKKSFLDML 636
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 142/286 (49%), Gaps = 5/286 (1%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGW---KTPEDAEVFFKKMR 230
+ +L +C+ A + ++ + + + ++I++ G + ++A F +M
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEME 290
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
G+T +++TYN L+ +C + K+L +M +R ++P+V+T++ +I G+
Sbjct: 291 MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLR 350
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
+A ++ KEM G PD Y + I FC L +A +VD M SKG +PN T+N+
Sbjct: 351 EAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILI 410
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG 410
+ +N + ++ +M G +T + LI+ F + K+ +A +L+ +MV +
Sbjct: 411 NGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVP 470
Query: 411 SYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKV 456
+ +L D LCD G+ +A + F E IEK + ++ I +
Sbjct: 471 PNIVTYKILLDGLCDNGESEKALEIF-EKIEKSKMELDIGIYNIII 515
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 125/266 (46%), Gaps = 4/266 (1%)
Query: 190 DARNVYHSLKH-QFRPNLQTFNILLSGWKTPEDAEVFF---KKMREMGVTPDVVTYNSLV 245
DA +++ + H + P + F+ L S + ++ K+M G+ ++ T + ++
Sbjct: 71 DAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMI 130
Query: 246 DVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCY 305
+ +C+ R+L A+ + ++ + P+ IT++++I GL L G+ +A +++ M E G
Sbjct: 131 NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK 190
Query: 306 PDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNM 365
PD+ N + C++ + EA L+D+M G PNA TY + S + +
Sbjct: 191 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 250
Query: 366 YHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCD 425
+M + +I K ++ A L+ +M KG + + ++L C+
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCN 310
Query: 426 MGKLGEAEKCFLEMIEKGQKPSNVSF 451
G+ + K +MI++ P+ V+F
Sbjct: 311 AGRWDDGAKLLRDMIKRKINPNVVTF 336
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 84/192 (43%), Gaps = 1/192 (0%)
Query: 284 GLVG-QPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPN 342
GLV + D A D+ ++M P V ++ K+ L +M KG+ N
Sbjct: 63 GLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHN 122
Query: 343 ATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWG 402
T ++ F L +++ +++ LG PNT + LI + +V AL+L
Sbjct: 123 LYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVD 182
Query: 403 DMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELAN 462
MVE G + + L + LC GK EA +M+E G +P+ V++ + +M +
Sbjct: 183 RMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSG 242
Query: 463 RHEALQNLTQKM 474
+ L +KM
Sbjct: 243 QTALAMELLRKM 254
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 184/418 (44%), Gaps = 39/418 (9%)
Query: 70 VLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARW 129
V+KR+R P L F++ F HT + + M+ L + + LL +
Sbjct: 46 VVKRLRQESCVP-LALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLL--QQM 102
Query: 130 KDQTLITPRTVMV-VLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSM 188
K Q + + V++ +V + VE F R K+ D +N +L TL E +
Sbjct: 103 KLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRI 162
Query: 189 TDARNVYHSLKHQ-FRPNLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVT---- 240
VY +K F PN+ T+N+LL + A+ +M G PD V+
Sbjct: 163 QMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTV 222
Query: 241 --------------------------YNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVI 274
YN+L++ CK + + A++++ EM E+ +SP+VI
Sbjct: 223 ISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVI 282
Query: 275 TYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEM 334
+Y+++I L GQ + A L +M + GC+P++ ++ ++ + +A DL ++M
Sbjct: 283 SYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQM 342
Query: 335 TSK-GLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEK 393
GL PN YN + F ++ + +++ M +GC PN ++ LI F K+
Sbjct: 343 IRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGS 402
Query: 394 VEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
++ A+ +W M+ G +V + + LC K EAE M ++ PS +F
Sbjct: 403 LDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTF 460
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 162/410 (39%), Gaps = 61/410 (14%)
Query: 93 RRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTV--MVVLARTAKV 150
+R GF F+ + +L L ++ + LL+E K P V V++ +V
Sbjct: 173 KRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKG---CCPDAVSYTTVISSMCEV 229
Query: 151 CSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHS------------- 197
V++ E RF+ +V + +NAL+ LC+E A +
Sbjct: 230 GLVKEGRELAERFEPVV-----SVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISY 284
Query: 198 -----------------------LKHQFRPNLQTFNILLSGW---KTPEDAEVFFKKM-R 230
LK PN+ T + L+ G T DA + +M R
Sbjct: 285 STLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIR 344
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
G+ P+VV YN+LV +C + KA V M E SP++ TY S+I G G D
Sbjct: 345 GFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLD 404
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
A + +M GC P+V Y + C + +EA L++ M+ + P+ T+N F
Sbjct: 405 GAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFI 464
Query: 351 RIFY------WSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDM 404
+ W+ + HR C PN + L+ K ++E A L ++
Sbjct: 465 KGLCDAGRLDWAEKVFRQMEQQHR-----CPPNIVTYNELLDGLAKANRIEEAYGLTREI 519
Query: 405 VEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
+G + + L C+ G G A + +M+ G+ P ++ I
Sbjct: 520 FMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMI 569
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 105/254 (41%), Gaps = 11/254 (4%)
Query: 225 FFKKMREMGV---TPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIG 281
FFK + + TP +T+ ++ +++ +L +M+ + + S+I
Sbjct: 62 FFKSIANSNLFKHTP--LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVIS 119
Query: 282 GLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNP 341
VG ++A ++ +KE+GC P V YN + R++ Y + +M G P
Sbjct: 120 VYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEP 179
Query: 342 NATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLW 401
N TYN+ + +N + + + M GC P+ S +I E+ L
Sbjct: 180 NVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVI-----SSMCEVGLVKE 234
Query: 402 GDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRR-IKVLMEL 460
G + + F V + L + LC A + EM+EKG P+ +S+ I VL
Sbjct: 235 GRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNS 294
Query: 461 ANRHEALQNLTQKM 474
A LTQ +
Sbjct: 295 GQIELAFSFLTQML 308
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 95/221 (42%), Gaps = 7/221 (3%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTP---EDAEVFFKKMR 230
+ ++ LC+ +A ++ + K P++ TFN + G + AE F++M
Sbjct: 425 YTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQME 484
Query: 231 EMG-VTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQP 289
+ P++VTYN L+D K +E+AY + E+ R + TY +++ G G P
Sbjct: 485 QQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLP 544
Query: 290 DKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTS--KGLNPNATTYN 347
A ++ +M G PD N I +C + A ++D ++ + P+ +Y
Sbjct: 545 GIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYT 604
Query: 348 LFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLF 388
SN + + RM+ G P+ + LI F
Sbjct: 605 NVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 148/284 (52%), Gaps = 10/284 (3%)
Query: 175 FNALLRTLCQEKSMTDARNVY-HSLKHQFRPNLQTFNILL-----SG-WKTPEDAEVFFK 227
+N ++ +LC++ + A +V H K RP++ T+N L+ SG W A +
Sbjct: 187 YNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS--ARILSD 244
Query: 228 KMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVG 287
MR MG++PDV+T+++L+DVY K +L +A K +EM +R ++P+++TY S+I GL + G
Sbjct: 245 MMR-MGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHG 303
Query: 288 QPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYN 347
D+A+ VL + G +P+ YN I +C AKR+ + ++ M+ G++ + TYN
Sbjct: 304 LLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYN 363
Query: 348 LFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEK 407
++ + + ++ + RM+ G HP+ + L+ K+ AL D+ +
Sbjct: 364 TLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKS 423
Query: 408 GFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+ +++ LC K+ +A F + KG P +++
Sbjct: 424 KTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITY 467
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 149/338 (44%), Gaps = 37/338 (10%)
Query: 138 RTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTD------- 190
R++++V+A TAK R +E N AL +C ++ +
Sbjct: 3 RSIVIVIALTAKGFLHRHLLE------------KGNLVTALSLRICNSRAFSGRSDYRER 50
Query: 191 ARNVYHSLK--------------HQFRPNLQTFNILLSGWKTPEDAEV---FFKKMREMG 233
R+ HS+K H P++ F+ LL E F+ + +G
Sbjct: 51 LRSGLHSIKFNDALTLFCDMAESHPL-PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLG 109
Query: 234 VTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKAR 293
++ D+ ++ +L+D +C+ L A L +M + P ++T+ S++ G V + +A
Sbjct: 110 ISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAM 169
Query: 294 DVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIF 353
++ ++ G P+V YN I + C ++ A D++ M G+ P+ TYN
Sbjct: 170 SLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRL 229
Query: 354 YWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYT 413
+ S S + MM +G P+ + LI ++ K+ ++ A + + +M+++
Sbjct: 230 FHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNI 289
Query: 414 LVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+ + L + LC G L EA+K ++ KG P+ V++
Sbjct: 290 VTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTY 327
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 143/289 (49%), Gaps = 7/289 (2%)
Query: 168 PDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSG---WKTPEDAE 223
PD T + A++ LC+ A N+ + + K + ++ +N ++ G +K +DA
Sbjct: 213 PDLVT--YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAF 270
Query: 224 VFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGL 283
F KM G+ PDV TYN L+ C A ++L +M E++++PD++ + ++I
Sbjct: 271 DLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAF 330
Query: 284 GLVGQPDKARDVLKEM-KEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPN 342
G+ +A + EM K C+PDV AYN I+ FC KR+ E ++ EM+ +GL N
Sbjct: 331 VKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 390
Query: 343 ATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWG 402
TY F+ + D ++ ++ +M+ G HP+ + L+ VE AL ++
Sbjct: 391 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFE 450
Query: 403 DMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
M ++ + + + LC GK+ + F + KG KP+ V++
Sbjct: 451 YMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTY 499
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 147/314 (46%), Gaps = 5/314 (1%)
Query: 143 VLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQ 201
+L+ AK+ + + + L + ++ + C+ ++ A + + K
Sbjct: 81 LLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLG 140
Query: 202 FRPNLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAY 258
+ P++ T N LL+G+ +A +M EMG PD VT+ +LV + + +A
Sbjct: 141 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 200
Query: 259 KVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNF 318
+++ M + PD++TY ++I GL G+PD A ++L +M++ DV YN I
Sbjct: 201 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGL 260
Query: 319 CIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNT 378
C K + +A+DL ++M +KG+ P+ TYN + + M+ +P+
Sbjct: 261 CKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDL 320
Query: 379 QSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVS-DVLFDLLCDMGKLGEAEKCFL 437
LI F K+ K+ A +L+ +MV+ +V+ + L C ++ E + F
Sbjct: 321 VFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFR 380
Query: 438 EMIEKGQKPSNVSF 451
EM ++G + V++
Sbjct: 381 EMSQRGLVGNTVTY 394
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 4/207 (1%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGW---KTPEDAEVFF 226
D +N L++ C+ K + + V+ + + N T+ L+ G+ + ++A++ F
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
K+M GV PD++TYN L+D C +E A V + M++RD+ D++TYT++I L
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
G+ + D+ + G P+V Y + FC EA L EM G PN+ TY
Sbjct: 475 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTY 534
Query: 347 NLFFRIFYWSNDLQSSWNMYHRMMGLG 373
N R D +S + M G
Sbjct: 535 NTLIRARLRDGDEAASAELIKEMRSCG 561
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 130/276 (47%), Gaps = 19/276 (6%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSL---KHQFRPNLQTFNILLSG---WKTPEDAEVFFKK 228
FNAL+ +E + +A +Y + KH F P++ +N L+ G +K E+ F++
Sbjct: 323 FNALIDAFVKEGKLVEAEKLYDEMVKSKHCF-PDVVAYNTLIKGFCKYKRVEEGMEVFRE 381
Query: 229 MREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQ 288
M + G+ + VTY +L+ + + R+ + A V +M + PD++TY ++ GL G
Sbjct: 382 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGN 441
Query: 289 PDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNL 348
+ A V + M++ D+ Y I C A ++ + +DL ++ KG+ PN TY
Sbjct: 442 VETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 501
Query: 349 FFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKG 408
F + + ++ M G PN+ + LIR + + +L +M G
Sbjct: 502 MMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCG 561
Query: 409 FG----SYTLVSDVLFDLLCDMGKLGEAEKCFLEMI 440
F ++ LV+++L D G +K FL+M+
Sbjct: 562 FAGDASTFGLVTNMLHD--------GRLDKSFLDML 589
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 123/269 (45%), Gaps = 12/269 (4%)
Query: 150 VCSVRQTVEFFRRFKKL-----VPDFDTNCFNALLRTLCQEKSMTDA-RNVYHSLKHQFR 203
+C + + F F K+ PD T +N L+ LC +DA R + L+
Sbjct: 260 LCKYKHMDDAFDLFNKMETKGIKPDVFT--YNPLISCLCNYGRWSDASRLLSDMLEKNIN 317
Query: 204 PNLQTFNILLSGW----KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYK 259
P+L FN L+ + K E +++ + ++ PDVV YN+L+ +CK + +E+ +
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377
Query: 260 VLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFC 319
V EM +R L + +TYT++I G D A+ V K+M G +PD+ YN + C
Sbjct: 378 VFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLC 437
Query: 320 IAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQ 379
+ A + + M + + + TY + ++ W+++ + G PN
Sbjct: 438 NNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVV 497
Query: 380 SCMFLIRLFKKQEKVEMALQLWGDMVEKG 408
+ ++ F ++ E A L+ +M E G
Sbjct: 498 TYTTMMSGFCRKGLKEEADALFVEMKEDG 526
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 131/305 (42%), Gaps = 7/305 (2%)
Query: 154 RQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNIL 212
R T+ + R F D +C L R + Q+ + DA ++ + K + P++ F+ L
Sbjct: 25 RTTLCWERSFAGASSD---DCRENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKL 81
Query: 213 LSGWKTPEDAEVFF---KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDL 269
LS ++ ++M+ +G++ ++ TY+ ++ +C+ +L A +L +M +
Sbjct: 82 LSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGY 141
Query: 270 SPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYD 329
P ++T S++ G + +A ++ +M E G PD + + + EA
Sbjct: 142 GPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVA 201
Query: 330 LVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFK 389
LV+ M KG P+ TY + + N+ ++M + +I
Sbjct: 202 LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLC 261
Query: 390 KQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNV 449
K + ++ A L+ M KG + L LC+ G+ +A + +M+EK P V
Sbjct: 262 KYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLV 321
Query: 450 SFRRI 454
F +
Sbjct: 322 FFNAL 326
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 139/276 (50%), Gaps = 9/276 (3%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKTPEDAEV---FFKKMR 230
++ + T C+ + A +HS+K PN+ TF L+ G+ D EV +K+MR
Sbjct: 166 YSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMR 225
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
+ ++ +VVTY +L+D +CK E+++A ++ M E + P+ + YT+II G G D
Sbjct: 226 RVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSD 285
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
A L +M G D+ AY I C +L+EA ++V++M L P+ +
Sbjct: 286 NAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMM 345
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG 410
++ S ++++ NMYH+++ G P+ + +I K ++ A+ + +EK
Sbjct: 346 NAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF--CIEK--- 400
Query: 411 SYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKP 446
+ ++ VL D LC G E E+ F ++ E G P
Sbjct: 401 ANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVP 436
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 149/329 (45%), Gaps = 12/329 (3%)
Query: 150 VCSVRQTVEFFRRFKKLVPDF----DTNCFNALLRTLCQEKSMTDARNVYHSLK--HQF- 202
VC + Q V+F +P F D +N+L+ C+ + A V SL+ H F
Sbjct: 66 VCKLGQ-VKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFI 124
Query: 203 -RPNLQTFNILLSGWKTPEDAEVFFKKMREM--GVTPDVVTYNSLVDVYCKGRELEKAYK 259
+P++ +FN L +G+ + + F M M +P+VVTY++ +D +CK EL+ A K
Sbjct: 125 CKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALK 184
Query: 260 VLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFC 319
M+ LSP+V+T+T +I G G + A + KEM+ +V Y A I FC
Sbjct: 185 SFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFC 244
Query: 320 IAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQ 379
++ A ++ M + PN+ Y F+ D ++ +M+ G +
Sbjct: 245 KKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDIT 304
Query: 380 SCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEM 439
+ +I K++ A ++ DM + ++ + + G++ A + ++
Sbjct: 305 AYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKL 364
Query: 440 IEKGQKPSNVSFRR-IKVLMELANRHEAL 467
IE+G +P V+ I + + HEA+
Sbjct: 365 IERGFEPDVVALSTMIDGIAKNGQLHEAI 393
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 135/307 (43%), Gaps = 8/307 (2%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTPED---AEVFFKKMR 230
FN+++ +C+ + A ++ HS+ + P++ ++N L+ G D A + + +R
Sbjct: 59 FNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLR 118
Query: 231 EMG---VTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVG 287
PD+V++NSL + + K + L++ + + M + SP+V+TY++ I G
Sbjct: 119 ASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVTYSTWIDTFCKSG 177
Query: 288 QPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYN 347
+ A MK P+V + I +C A L A L EM ++ N TY
Sbjct: 178 ELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYT 237
Query: 348 LFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEK 407
F ++Q + MY RM+ PN+ +I F ++ + A++ M+ +
Sbjct: 238 ALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQ 297
Query: 408 GFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEAL 467
G V+ LC GKL EA + +M + P V F + + R +A
Sbjct: 298 GMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAA 357
Query: 468 QNLTQKM 474
N+ K+
Sbjct: 358 VNMYHKL 364
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 117/284 (41%), Gaps = 24/284 (8%)
Query: 90 YTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAK 149
YT GFF S + M ++ ++M N L I A ++ L K
Sbjct: 271 YTTIIDGFFQRGDSDNAMKFL---AKMLNQGMRLDITAYG---------VIISGLCGNGK 318
Query: 150 VCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQT 208
+ + VE + LVPD F ++ + M A N+YH L + F P++
Sbjct: 319 LKEATEIVEDMEK-SDLVPDMVI--FTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVA 375
Query: 209 FNILLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMR 265
+ ++ G +A V+F + + V Y L+D CK + + ++ ++
Sbjct: 376 LSTMIDGIAKNGQLHEAIVYFCIEK-----ANDVMYTVLIDALCKEGDFIEVERLFSKIS 430
Query: 266 ERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLR 325
E L PD YTS I GL G A + M + G D+ AY I +
Sbjct: 431 EAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMV 490
Query: 326 EAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRM 369
EA + DEM + G++P++ ++L R + ++ ++ ++ M
Sbjct: 491 EARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDM 534
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 108/271 (39%), Gaps = 45/271 (16%)
Query: 225 FFKKMREMGVTPDVVTYN----SLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSII 280
F ++R+ PD T N L++ C L K L + R +P ++ S++
Sbjct: 8 FLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSL----KFLAYLVSRGYTPHRSSFNSVV 63
Query: 281 GGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTS---- 336
+ +GQ A D++ M +GC PDV +YN+ I C +R A +++ + +
Sbjct: 64 SFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGF 123
Query: 337 ---------------------------------KGLNPNATTYNLFFRIFYWSNDLQSSW 363
K +PN TY+ + F S +LQ +
Sbjct: 124 ICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLAL 183
Query: 364 NMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLL 423
+H M PN + LI + K +E+A+ L+ +M + L D
Sbjct: 184 KSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGF 243
Query: 424 CDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
C G++ AE+ + M+E +P+++ + I
Sbjct: 244 CKKGEMQRAEEMYSRMVEDRVEPNSLVYTTI 274
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 139/258 (53%), Gaps = 4/258 (1%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLS---GWKTPEDAEVFFKKMR 230
++ ++ +LC+ + DA N++ ++++ RPN+ T++ L+S + DA M
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
E + P++VT+++L+D + K +L KA K+ +EM +R + P++ TY+S+I G ++ +
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
+A+ +L+ M C P+V YN I FC AKR+ + +L EM+ +GL N TY
Sbjct: 376 EAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI 435
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG 410
F+ + D ++ ++ +M+ +G HPN + L+ K K+ A+ ++ +
Sbjct: 436 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 495
Query: 411 SYTLVSDVLFDLLCDMGK 428
+++ + +C GK
Sbjct: 496 PDIYTYNIMIEGMCKAGK 513
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 131/273 (47%), Gaps = 6/273 (2%)
Query: 168 PDFDTNCFNALLRTLCQEKSMTDARNVYHSLKH-QFRPNLQTFNIL---LSGWKTPEDAE 223
PD T + A++ LC+ A N+ + ++ + N+ ++ + L ++ +DA
Sbjct: 216 PDLVT--YGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 273
Query: 224 VFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGL 283
F +M GV P+V+TY+SL+ C A ++L +M ER ++P+++T++++I
Sbjct: 274 NLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAF 333
Query: 284 GLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNA 343
G+ KA + +EM + P++ Y++ I FC+ RL EA +++ M K PN
Sbjct: 334 VKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNV 393
Query: 344 TTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGD 403
TYN F + + ++ M G NT + LI F + + A ++
Sbjct: 394 VTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 453
Query: 404 MVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCF 436
MV G L ++L D LC GKL +A F
Sbjct: 454 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF 486
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 133/285 (46%), Gaps = 4/285 (1%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTPEDAEV---FF 226
DT F L+ L ++A + + + +P+L T+ +++G D ++
Sbjct: 182 DTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLL 241
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
KM + +VV Y++++D CK R + A + EM + + P+VITY+S+I L
Sbjct: 242 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 301
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
G+ A +L +M E P++ ++A I F +L +A L +EM + ++PN TY
Sbjct: 302 GRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTY 361
Query: 347 NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE 406
+ F + L + M M+ C PN + LI F K ++V+ ++L+ +M +
Sbjct: 362 SSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQ 421
Query: 407 KGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+G T+ L A+ F +M+ G P+ +++
Sbjct: 422 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 466
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 143/350 (40%), Gaps = 54/350 (15%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKHQFRP--NLQTFNILLSGWKTPEDAEV---FFKKM 229
+ +LRT + + DA ++ + Q RP ++ F+ LLS ++ F +KM
Sbjct: 46 YREVLRTGLSDIELDDAIGLFGVMA-QSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKM 104
Query: 230 REMGVTPDVVTYNSLVDVYCK-----------------------------------GREL 254
+G++ ++ TYN L++ +C+ G +
Sbjct: 105 EILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRI 164
Query: 255 EKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAA 314
A ++D+M E PD +T+T++I GL L + +A ++ M + GC PD+ Y A
Sbjct: 165 SDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAV 224
Query: 315 IRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGC 374
+ C A +L+++M + + N Y+ + N++ M G
Sbjct: 225 VNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 284
Query: 375 HPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEK 434
PN + LI + A +L DM+E+ + L D GKL +AEK
Sbjct: 285 RPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEK 344
Query: 435 CFLEMIEKGQKPSNVSFRRI-------------KVLMELANRHEALQNLT 471
+ EMI++ P+ ++ + K ++EL R + L N+
Sbjct: 345 LYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVV 394
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 141/285 (49%), Gaps = 7/285 (2%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKTP---EDAEVFF 226
D +N ++ C+ + DA ++ ++ R + T+N L++G DA
Sbjct: 173 DVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLM 232
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
+ M + P+V+T+ +++DV+ K + +A K+ +EM R + PDV TY S+I GL +
Sbjct: 233 RDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMH 292
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
G+ D+A+ +L M GC PDV YN I FC +KR+ E L EM +GL + TY
Sbjct: 293 GRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITY 352
Query: 347 NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE 406
N + ++ + ++ ++ RM PN ++ L+ +VE AL L+ +M +
Sbjct: 353 NTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQK 409
Query: 407 KGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+++ +C +G + +A F + KG KP VS+
Sbjct: 410 SEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSY 454
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 137/301 (45%), Gaps = 4/301 (1%)
Query: 143 VLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQ 201
VL++ AK + + F + D +N ++ LC+ A +V + K
Sbjct: 75 VLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFG 134
Query: 202 FRPNLQTFNILLSGWKTPE---DAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAY 258
+ P++ T + L++G+ DA KM EMG PDVV YN+++D CK + A
Sbjct: 135 YEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAV 194
Query: 259 KVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNF 318
++ D M + D +TY S++ GL G+ A ++++M P+V + A I F
Sbjct: 195 ELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVF 254
Query: 319 CIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNT 378
+ EA L +EMT + ++P+ TYN + + M M+ GC P+
Sbjct: 255 VKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDV 314
Query: 379 QSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLE 438
+ LI F K ++V+ +L+ +M ++G T+ + + G+ A++ F
Sbjct: 315 VTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSR 374
Query: 439 M 439
M
Sbjct: 375 M 375
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 125/250 (50%), Gaps = 9/250 (3%)
Query: 164 KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGW---KTP 219
+ +VP+ T F A++ +E ++A +Y + + P++ T+N L++G
Sbjct: 238 RDIVPNVIT--FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRV 295
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
++A+ M G PDVVTYN+L++ +CK + +++ K+ EM +R L D ITY +I
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 355
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
I G G+PD A+++ M P++ Y+ + C+ R+ +A L + M +
Sbjct: 356 IQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEI 412
Query: 340 NPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQ 399
+ TTYN+ +++ +W+++ + G P+ S +I F ++ + + +
Sbjct: 413 ELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDL 472
Query: 400 LWGDMVEKGF 409
L+ M E G
Sbjct: 473 LYRKMQEDGL 482
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 111/247 (44%)
Query: 228 KMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVG 287
KM + G PDVVT +SL++ +C+G + A ++ +M E PDV+ Y +II G +G
Sbjct: 129 KMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIG 188
Query: 288 QPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYN 347
+ A ++ M+ G D YN+ + C + R +A L+ +M + + PN T+
Sbjct: 189 LVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFT 248
Query: 348 LFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEK 407
+F + +Y M P+ + LI +V+ A Q+ MV K
Sbjct: 249 AVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK 308
Query: 408 GFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEAL 467
G + + L + C ++ E K F EM ++G +++ I A R +A
Sbjct: 309 GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAA 368
Query: 468 QNLTQKM 474
Q + +M
Sbjct: 369 QEIFSRM 375
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 102/218 (46%), Gaps = 10/218 (4%)
Query: 128 RWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKS 187
R D + T +++ L +V +Q ++ K +PD T +N L+ C+ K
Sbjct: 273 RCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVT-KGCLPDVVT--YNTLINGFCKSKR 329
Query: 188 MTDARNVYHSLKHQ-FRPNLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNS 243
+ + ++ + + + T+N ++ G+ P+ A+ F +M P++ TY+
Sbjct: 330 VDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSI 386
Query: 244 LVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYG 303
L+ C +EKA + + M++ ++ D+ TY +I G+ +G + A D+ + + G
Sbjct: 387 LLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKG 446
Query: 304 CYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNP 341
PDV +Y I FC ++ ++ L +M GL P
Sbjct: 447 LKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 141/279 (50%), Gaps = 13/279 (4%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSLK-HQFRPNLQTFNILLSG------WKTPEDAE 223
D + ++ +LC+ + A +++ ++ + RP++ + L++G W+ DA+
Sbjct: 176 DVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR---DAD 232
Query: 224 VFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGL 283
+ M + + PDV+T+N+L+D + K + A ++ +EM ++P++ TYTS+I G
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 284 GLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNA 343
+ G D+AR + M+ GC+PDV AY + I FC K++ +A + EM+ KGL N
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352
Query: 344 TTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGD 403
TY + F + ++ M+ G PN ++ L+ KV+ AL ++ D
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFED 412
Query: 404 MVEK---GFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEM 439
M ++ G +VL LC GKL +A F +M
Sbjct: 413 MQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM 451
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 135/283 (47%), Gaps = 3/283 (1%)
Query: 205 NLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVL 261
+L T N+L++ + P A F KM ++G PD+VT+ SL++ +C G +E+A ++
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV 165
Query: 262 DEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIA 321
++M E + PDV+ YT+II L G + A + +M+ YG PDV Y + + C +
Sbjct: 166 NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNS 225
Query: 322 KRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSC 381
R R+A L+ MT + + P+ T+N F + +Y+ M+ + PN +
Sbjct: 226 GRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTY 285
Query: 382 MFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIE 441
LI F + V+ A Q++ M KG + L + C K+ +A K F EM +
Sbjct: 286 TSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQ 345
Query: 442 KGQKPSNVSFRRIKVLMELANRHEALQNLTQKMAVFGRPVQVR 484
KG + +++ + + Q + M G P +R
Sbjct: 346 KGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIR 388
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 133/288 (46%), Gaps = 46/288 (15%)
Query: 164 KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGW---KTP 219
+K+ PD T FNAL+ +E DA +Y+ + + PN+ T+ L++G+
Sbjct: 241 RKIKPDVIT--FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCV 298
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
++A F M G PDVV Y SL++ +CK ++++ A K+ EM ++ L+ + ITYT++
Sbjct: 299 DEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTL 358
Query: 280 IGGLGLVGQPDKARDVLKEMKEYG---------------CY------------------- 305
I G G VG+P+ A++V M G CY
Sbjct: 359 IQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREM 418
Query: 306 ----PDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQS 361
P++ YN + C +L +A + ++M + ++ TY + + + +++
Sbjct: 419 DGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKN 478
Query: 362 SWNMYHRMMGLGCHPNTQSCMFLIR-LFKKQEKVEMALQLWGDMVEKG 408
+ N++ + G PN + +I LF++ K E A L+ M E G
Sbjct: 479 AVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHE-AHVLFRKMKEDG 525
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 92/223 (41%)
Query: 225 FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLG 284
F M E P ++ + L++V K ++ + + D ++ +S D+ T ++
Sbjct: 59 LFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFC 118
Query: 285 LVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNAT 344
QP A L +M + G PD+ + + I FC+ R+ EA +V++M G+ P+
Sbjct: 119 QSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVV 178
Query: 345 TYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDM 404
Y + + + +++ +M G P+ L+ + A L M
Sbjct: 179 MYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM 238
Query: 405 VEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPS 447
++ + + L D GK +AE+ + EMI P+
Sbjct: 239 TKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 7/177 (3%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGW---KTPEDAEVFF 226
+T + L++ Q A+ V+ + + PN++T+N+LL + A + F
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410
Query: 227 KKM--REM-GVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGL 283
+ M REM GV P++ TYN L+ C +LEKA V ++MR+R++ +ITYT II G+
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGM 470
Query: 284 GLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLN 340
G+ A ++ + G P+V Y I EA+ L +M G++
Sbjct: 471 CKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 85/202 (42%)
Query: 253 ELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYN 312
+ +A + M E P +I +T ++ + + + D ++ ++ G D+ N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 313 AAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGL 372
+ FC + + A + +M G P+ T+ F N ++ + +M ++M+ +
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 373 GCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEA 432
G P+ +I K V AL L+ M G ++ L + LC+ G+ +A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 433 EKCFLEMIEKGQKPSNVSFRRI 454
+ M ++ KP ++F +
Sbjct: 232 DSLLRGMTKRKIKPDVITFNAL 253
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 179/401 (44%), Gaps = 16/401 (3%)
Query: 14 FLPAPNLILSRLLSSTLNDGDVHRVMTIITTTSSPENLRQSLKSSGVFLSNELIDQVLKR 73
F+ + L SR+L + D T S+ + L S+ SG+ L E++ +L+
Sbjct: 72 FMESTKLSASRVLDTLQQD------CPGFNTKSALDELNVSI--SGL-LVREVLVGILRT 122
Query: 74 VRFSHANPSQTL--EFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKD 131
+ F + L +F+ + G ++ F HTA ++ I + + L I+ KD
Sbjct: 123 LSFDNKTRCAKLAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRL-IDEMIKD 181
Query: 132 QTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDA 191
T T +++ + R VE F + K + +NA+L +L K
Sbjct: 182 GYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLI 241
Query: 192 RNVYHS-LKHQFRPNLQTFNILLSGWKTPEDAEVFFKKMREM---GVTPDVVTYNSLVDV 247
VY L+ F P++ T+NI++ + ++ + EM G +PD+ TYN L+
Sbjct: 242 DWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHH 301
Query: 248 YCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPD 307
G + A +L+ MRE + P VI +T++I GL G+ + + + E + GC PD
Sbjct: 302 LATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPD 361
Query: 308 VPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYH 367
V Y I + L +A ++ EMT KG PN TYN R F + + + +
Sbjct: 362 VVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLK 421
Query: 368 RMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKG 408
M GC+PN L+ K KV A ++ DMVEKG
Sbjct: 422 EMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 63/105 (60%), Gaps = 3/105 (2%)
Query: 204 PNLQTFNILLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKV 260
P++ + ++++G+ + E AE FK+M E G P+V TYNS++ +C + ++A +
Sbjct: 360 PDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACAL 419
Query: 261 LDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCY 305
L EM R +P+ + Y++++ L G+ +A +V+K+M E G Y
Sbjct: 420 LKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHY 464
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 121/290 (41%), Gaps = 16/290 (5%)
Query: 177 ALLRTLCQEKSMTDARNVYHSL-----KHQFRPNLQTFNILLSGWKTPEDAEVFFKKMRE 231
+LRTL + A+ Y + FR +++L+ + + + + + E
Sbjct: 118 GILRTLSFDNKTRCAKLAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDE 177
Query: 232 M---GVTPDVVTYNSLVDVYCKGRELEKAYKVLDEM---RERDLSPDVITYTSIIGGLGL 285
M G T+N L+ C E A V+++ + + P +Y +I+ L
Sbjct: 178 MIKDGYPTTACTFNLLI---CTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLG 234
Query: 286 VGQPDKARDVLKEMKEYGCYPDVPAYNAAI-RNFCIAKRLREAYDLVDEMTSKGLNPNAT 344
V Q V ++M E G PDV YN + NF + K R Y L+DEM G +P+
Sbjct: 235 VKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDR-LYRLLDEMVKDGFSPDLY 293
Query: 345 TYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDM 404
TYN+ N ++ N+ + M +G P LI + K+E +
Sbjct: 294 TYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDET 353
Query: 405 VEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
V+ G + V+ G+L +AE+ F EM EKGQ P+ ++ +
Sbjct: 354 VKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSM 403
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 144/284 (50%), Gaps = 10/284 (3%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSG------WKTPEDAEVFFK 227
+ L+R LC+ + + A +++ + + RPN+ T+N L++G W DA +
Sbjct: 191 YTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWG---DAAWLLR 247
Query: 228 KMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVG 287
M + + P+V+T+ +L+D + K +L +A ++ + M + + PDV TY S+I GL + G
Sbjct: 248 DMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYG 307
Query: 288 QPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYN 347
D+AR + M+ GCYP+ Y I FC +KR+ + + EM+ KG+ N TY
Sbjct: 308 LLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYT 367
Query: 348 LFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEK 407
+ + + + ++++M P+ ++ L+ KVE AL ++ M ++
Sbjct: 368 VLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKR 427
Query: 408 GFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+ ++ +C +GK+ +A F + KG KP+ +++
Sbjct: 428 EMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITY 471
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 146/309 (47%), Gaps = 6/309 (1%)
Query: 143 VLARTAKVCSVRQTVEFFRRFKKL-VPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KH 200
+L+ AK+ + F + + L +P C N ++ +C A + K
Sbjct: 89 LLSVIAKMNRYDVVISLFEQMQILGIPPLLCTC-NIVMHCVCLSSQPCRASCFLGKMMKL 147
Query: 201 QFRPNLQTFNILLSG---WKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKA 257
F P+L TF LL+G W EDA F ++ MG P+VVTY +L+ CK R L A
Sbjct: 148 GFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHA 207
Query: 258 YKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRN 317
++ ++M P+V+TY +++ GL +G+ A +L++M + P+V + A I
Sbjct: 208 VELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDA 267
Query: 318 FCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPN 377
F +L EA +L + M + P+ TY L + M++ M GC+PN
Sbjct: 268 FVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPN 327
Query: 378 TQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFL 437
LI F K ++VE ++++ +M +KG + T+ VL C +G+ A++ F
Sbjct: 328 EVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFN 387
Query: 438 EMIEKGQKP 446
+M + P
Sbjct: 388 QMSSRRAPP 396
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 123/250 (49%), Gaps = 6/250 (2%)
Query: 164 KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSG---WKTP 219
+++ P+ T F AL+ + + +A+ +Y+ + + P++ T+ L++G +
Sbjct: 252 RRIEPNVIT--FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLL 309
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
++A F M G P+ V Y +L+ +CK + +E K+ EM ++ + + ITYT +
Sbjct: 310 DEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVL 369
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
I G LVG+PD A++V +M PD+ YN + C ++ +A + + M + +
Sbjct: 370 IQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREM 429
Query: 340 NPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQ 399
+ N TY + + ++ +++++ + G PN + +I F ++ + A
Sbjct: 430 DINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADS 489
Query: 400 LWGDMVEKGF 409
L+ M E GF
Sbjct: 490 LFKKMKEDGF 499
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 88/176 (50%), Gaps = 4/176 (2%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGW---KTPEDAEVFFKKMR 230
+ L+ C+ K + D +++ + + N T+ +L+ G+ P+ A+ F +M
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
PD+ TYN L+D C ++EKA + + MR+R++ +++TYT II G+ +G+ +
Sbjct: 391 SRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVE 450
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
A D+ + G P+V Y I FC + EA L +M G PN + Y
Sbjct: 451 DAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 99/232 (42%)
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
DA F +M P ++ + L+ V K + + ++M+ + P + T +
Sbjct: 65 NDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIV 124
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
+ + L QP +A L +M + G PD+ + + + +C R+ +A L D++ G
Sbjct: 125 MHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGF 184
Query: 340 NPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQ 399
PN TY R + L + ++++M G PN + L+ + + A
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAW 244
Query: 400 LWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
L DM+++ + L D +GKL EA++ + MI+ P ++
Sbjct: 245 LLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTY 296
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 99/210 (47%), Gaps = 3/210 (1%)
Query: 271 PDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDL 330
P +I +T ++ + + + D + ++M+ G P + N + C++ + A
Sbjct: 81 PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCF 140
Query: 331 VDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKK 390
+ +M G P+ T+ + N ++ + ++ +++G+G PN + LIR K
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200
Query: 391 QEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVS 450
+ A++L+ M G + + L LC++G+ G+A +M+++ +P+ ++
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260
Query: 451 FRR-IKVLMELANRHEA--LQNLTQKMAVF 477
F I +++ EA L N+ +M+V+
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVY 290
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 139/285 (48%), Gaps = 12/285 (4%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTP---EDAEVFFKKMR 230
+N+L+R LC+ D + + + PN+ TFN+LL + ++A +K+M
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
G++P+++TYN+L+D YC L +A +LD M SPD++T+TS+I G +V + D
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
V + + + G + Y+ ++ FC + +++ A +L EM S G+ P+ TY +
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445
Query: 351 RIFYWSNDLQSSWNMYHRM----MGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE 406
+ L+ + ++ + M LG T +I K KVE A L+ +
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT----IIEGMCKGGKVEDAWNLFCSLPC 501
Query: 407 KGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
KG + V+ LC G L EA +M E G P++ ++
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 135/292 (46%), Gaps = 38/292 (13%)
Query: 198 LKHQFRPNLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGREL 254
+K + P+ TFN L+ G +A V +M E G PDVVTYNS+V+ C+ +
Sbjct: 150 MKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDT 209
Query: 255 EKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAA 314
A +L +M ER++ DV TY++II L G D A + KEM+ G V YN+
Sbjct: 210 SLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSL 269
Query: 315 IRNFCIA-----------------------------------KRLREAYDLVDEMTSKGL 339
+R C A +L+EA +L EM ++G+
Sbjct: 270 VRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 329
Query: 340 NPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQ 399
+PN TYN + N L + NM M+ C P+ + LI+ + ++V+ ++
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMK 389
Query: 400 LWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
++ ++ ++G + + +L C GK+ AE+ F EM+ G P +++
Sbjct: 390 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 156/300 (52%), Gaps = 4/300 (1%)
Query: 156 TVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLS 214
++ R+ ++ D ++ ++ +LC++ + A +++ ++ + + ++ T+N L+
Sbjct: 212 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271
Query: 215 GWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSP 271
G D + K M + P+V+T+N L+DV+ K +L++A ++ EM R +SP
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 272 DVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLV 331
++ITY +++ G + + +A ++L M C PD+ + + I+ +C+ KR+ + +
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 391
Query: 332 DEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQ 391
++ +GL NA TY++ + F S ++ + ++ M+ G P+ + L+
Sbjct: 392 RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 451
Query: 392 EKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
K+E AL+++ D+ + ++ + + +C GK+ +A F + KG KP+ +++
Sbjct: 452 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 511
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 127/281 (45%), Gaps = 8/281 (2%)
Query: 112 GRSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFD 171
G+ + N ++ +I R +IT T+M ++ ++ R K PD
Sbjct: 312 GKLQEANELYKEMI-TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR-NKCSPDIV 369
Query: 172 TNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTPED---AEVFFK 227
T F +L++ C K + D V+ ++ K N T++IL+ G+ AE F+
Sbjct: 370 T--FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427
Query: 228 KMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVG 287
+M GV PDV+TY L+D C +LEKA ++ +++++ + ++ YT+II G+ G
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 487
Query: 288 QPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYN 347
+ + A ++ + G P+V Y I C L EA L+ +M G PN TYN
Sbjct: 488 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYN 547
Query: 348 LFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLF 388
R DL +S + M G + S +I +
Sbjct: 548 TLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 152/357 (42%), Gaps = 9/357 (2%)
Query: 125 IEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTN--CFNALLRTL 182
I K LI P + RT +C++ FF ++ CF LR+
Sbjct: 7 ITTNMKALRLIQPHLLKTGSLRTDLLCTISS---FFSSCERDFSSISNGNVCFRERLRSG 63
Query: 183 CQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTPEDAEV---FFKKMREMGVTPDV 238
+ DA ++ + + + P+L F+ S + + F K++ G+ ++
Sbjct: 64 IVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNI 123
Query: 239 VTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKE 298
T N +++ +C+ + AY VL ++ + PD T+ ++I GL L G+ +A ++
Sbjct: 124 YTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDR 183
Query: 299 MKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSND 358
M E GC PDV YN+ + C + A DL+ +M + + + TY+
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 243
Query: 359 LQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDV 418
+ ++ +++ M G + + L+R K K L DMV + + +V
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 419 LFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEALQNLTQKMA 475
L D+ GKL EA + + EMI +G P+ +++ + + NR N+ M
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 144/314 (45%), Gaps = 19/314 (6%)
Query: 127 ARWKDQTL---------ITPRTVM--VVLARTAKVCSVRQTVEFFRRF--KKLVPDFDTN 173
+W D L I P + V+L K +++ E ++ + + P+ T
Sbjct: 277 GKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT- 335
Query: 174 CFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGW---KTPEDAEVFFKKM 229
+N L+ C + +++A N+ + +++ P++ TF L+ G+ K +D F+ +
Sbjct: 336 -YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Query: 230 REMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQP 289
+ G+ + VTY+ LV +C+ +++ A ++ EM + PDV+TY ++ GL G+
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454
Query: 290 DKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLF 349
+KA ++ +++++ + Y I C ++ +A++L + KG+ PN TY +
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 514
Query: 350 FRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGF 409
L + + +M G PN + LIR + + + +L +M GF
Sbjct: 515 ISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574
Query: 410 GSYTLVSDVLFDLL 423
+ ++ D+L
Sbjct: 575 SADASSIKMVIDML 588
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 147/311 (47%), Gaps = 8/311 (2%)
Query: 153 VRQTVEFFRRF--KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHS-LKHQFRPNLQTF 209
++T +F R+ + +PD T FNA + L + + + ++ + +P +
Sbjct: 336 AKETGQFLRKIGERGYIPDSST--FNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGY 393
Query: 210 NILLSGWKTPE---DAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRE 266
+L+ + + + + K+M G+ V +YN+++D CK R +E A L EM++
Sbjct: 394 LVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQD 453
Query: 267 RDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLRE 326
R +SP+++T+ + + G + G K VL+++ +G PDV ++ I C AK +++
Sbjct: 454 RGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKD 513
Query: 327 AYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIR 386
A+D EM G+ PN TYN+ R + D S ++ +M G P+ + I+
Sbjct: 514 AFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQ 573
Query: 387 LFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKP 446
F K KV+ A +L M+ G L L + G+ EA + F + G P
Sbjct: 574 SFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVP 633
Query: 447 SNVSFRRIKVL 457
+ + R ++ L
Sbjct: 634 DSYTKRLVEEL 644
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 113/290 (38%), Gaps = 36/290 (12%)
Query: 213 LSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPD 272
LS ++ F +K+ E G PD T+N+ + KG +L + ++ D R + P
Sbjct: 330 LSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPG 389
Query: 273 VITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVD 332
Y ++ L + + LK+M G V +YNA I C A+R+ A +
Sbjct: 390 FNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLT 449
Query: 333 EMTSKGLNPN-----------------------------------ATTYNLFFRIFYWSN 357
EM +G++PN T++L +
Sbjct: 450 EMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAK 509
Query: 358 DLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSD 417
+++ +++ + M+ G PN + LIR + +++L+ M E G +
Sbjct: 510 EIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYN 569
Query: 418 VLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRR-IKVLMELANRHEA 466
C M K+ +AE+ M+ G KP N ++ IK L E EA
Sbjct: 570 ATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEA 619
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/435 (20%), Positives = 179/435 (41%), Gaps = 14/435 (3%)
Query: 51 LRQSLKSSGVFLSNELIDQVLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTML-Y 109
L Q + + L+ + VL+ + NP +L FY + + SL ++L
Sbjct: 63 LNQEFTTHRIGLNTRFVISVLQ----NQDNPLHSLRFYLWVSNFDPVYAKDQSLKSVLGN 118
Query: 110 ILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPD 169
L R +LL E R I+ + V++ ++ + + F + L
Sbjct: 119 ALFRKGPLLLSMELLKEIR-DSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMK 177
Query: 170 FDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGW---KTPEDAEVF 225
T +NA++ L + S+ A + ++ +P+ T+NIL+ G ++A
Sbjct: 178 PSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRL 237
Query: 226 FKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGL 285
K+M + G P+V TY L+D + +++A K L+ MR R L+P+ T + + G+
Sbjct: 238 VKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFR 297
Query: 286 VGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKR--LREAYDLVDEMTSKGLNPNA 343
P KA +VL E Y+A + +C++ +E + ++ +G P++
Sbjct: 298 CLPPCKAFEVLVGFMEKDSNLQRVGYDAVL--YCLSNNSMAKETGQFLRKIGERGYIPDS 355
Query: 344 TTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGD 403
+T+N +DL + ++ + G P + L++ ++ +
Sbjct: 356 STFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQ 415
Query: 404 MVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANR 463
M G S + + D LC ++ A EM ++G P+ V+F +
Sbjct: 416 MGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGD 475
Query: 464 HEALQNLTQKMAVFG 478
+ + + +K+ V G
Sbjct: 476 VKKVHGVLEKLLVHG 490
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 152/360 (42%), Gaps = 39/360 (10%)
Query: 77 SHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLIT 136
S ++P E + Y ++ F H+ S ++ LGR R FN I D+L + R L
Sbjct: 60 SQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPL-- 117
Query: 137 PRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYH 196
T E F K+ + EK ++ Y
Sbjct: 118 -------------------TGEIFTYLIKVYAE-----------AKLPEKVLS---TFYK 144
Query: 197 SLKHQFRPNLQTFN----ILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGR 252
L+ F P + N +L+S + A FK R GV P+ +YN L+ +C
Sbjct: 145 MLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLND 204
Query: 253 ELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYN 312
+L AY++ +M ERD+ PDV +Y +I G GQ + A ++L +M G PD +Y
Sbjct: 205 DLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYT 264
Query: 313 AAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGL 372
+ + C +LREAY L+ M KG NP+ YN F + + + M+
Sbjct: 265 TLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSN 324
Query: 373 GCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEA 432
GC PN+ S LI Q + + +M+ KGF + VS+ L C GK+ EA
Sbjct: 325 GCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEA 384
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 5/185 (2%)
Query: 269 LSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKR--LRE 326
L+ ++ TY +I P+K +M E+ P P + I + ++ R L++
Sbjct: 117 LTGEIFTY--LIKVYAEAKLPEKVLSTFYKMLEFNFTPQ-PKHLNRILDVLVSHRGYLQK 173
Query: 327 AYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIR 386
A++L G+ PN +YNL + F ++DL ++ ++ +M+ P+ S LI+
Sbjct: 174 AFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQ 233
Query: 387 LFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKP 446
F ++ +V A++L DM+ KGF L L + LC +L EA K M KG P
Sbjct: 234 GFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNP 293
Query: 447 SNVSF 451
V +
Sbjct: 294 DLVHY 298
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 134/269 (49%), Gaps = 7/269 (2%)
Query: 144 LARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHS-LKHQF 202
L R K+ + E ++ ++P+ T ++A++ C+ ++ A +Y L +
Sbjct: 244 LCRDNKMEEAEKMFELMKK-HGVLPNLYT--YSAMIDGYCKTGNVRQAYGLYKEILVAEL 300
Query: 203 RPNLQTFNILLSGWKTPED---AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYK 259
PN+ F L+ G+ + A F M + GV P++ YN L+ +CK + +A
Sbjct: 301 LPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVG 360
Query: 260 VLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFC 319
+L EM +LSPDV TYT +I GL + Q +A + ++MK +P YN+ I +C
Sbjct: 361 LLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYC 420
Query: 320 IAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQ 379
+ +A DL EMT+ G+ PN T++ + D++++ +Y M G P+
Sbjct: 421 KEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVV 480
Query: 380 SCMFLIRLFKKQEKVEMALQLWGDMVEKG 408
+ LI K+ ++ AL+L+ DM+E G
Sbjct: 481 TYTALIDAHFKEANMKEALRLYSDMLEAG 509
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 113/282 (40%), Gaps = 36/282 (12%)
Query: 223 EVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGG 282
E +M +G+ P+V Y + C+ ++E+A K+ + M++ + P++ TY+++I G
Sbjct: 219 EKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDG 278
Query: 283 LGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPN 342
G +A + KE+ P+V + + FC A+ L A L M G++PN
Sbjct: 279 YCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPN 338
Query: 343 ATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLI-------------RLFK 389
YN S ++ + + M L P+ + LI RLF+
Sbjct: 339 LYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQ 398
Query: 390 KQE----------------------KVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMG 427
K + +E AL L +M G + L D C++
Sbjct: 399 KMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVR 458
Query: 428 KLGEAEKCFLEMIEKGQKPSNVSFRR-IKVLMELANRHEALQ 468
+ A + EM KG P V++ I + AN EAL+
Sbjct: 459 DIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALR 500
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 102/231 (44%)
Query: 224 VFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGL 283
V ++ M G+ PDV Y L K K K+LDEM + P+V YT I L
Sbjct: 185 VDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDL 244
Query: 284 GLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNA 343
+ ++A + + MK++G P++ Y+A I +C +R+AY L E+ L PN
Sbjct: 245 CRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNV 304
Query: 344 TTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGD 403
+ F + +L ++ +++ M+ G PN LI K + A+ L +
Sbjct: 305 VVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSE 364
Query: 404 MVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
M +L + LC ++ EA + F +M + PS+ ++ +
Sbjct: 365 MESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSL 415
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 111/258 (43%), Gaps = 13/258 (5%)
Query: 150 VCSVRQTVEFFRRFKKL-----VPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FR 203
+C Q E R F+K+ P T +N+L+ C+E +M A ++ +
Sbjct: 384 LCIEDQVAEANRLFQKMKNERIFPSSAT--YNSLIHGYCKEYNMEQALDLCSEMTASGVE 441
Query: 204 PNLQTFNILLSGWKTPEDAEVFFKKMREM---GVTPDVVTYNSLVDVYCKGRELEKAYKV 260
PN+ TF+ L+ G+ D + EM G+ PDVVTY +L+D + K +++A ++
Sbjct: 442 PNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRL 501
Query: 261 LDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKE-MKEYGCYPDVPAYNAAIRNFC 319
+M E + P+ T+ ++ G G+ A D +E ++ C+ V + I C
Sbjct: 502 YSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHV-GFTCLIEGLC 560
Query: 320 IAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQ 379
+ A +M S G+ P+ +Y + + + + M+ G PN
Sbjct: 561 QNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLL 620
Query: 380 SCMFLIRLFKKQEKVEMA 397
L R ++ V+ A
Sbjct: 621 VNQLLARFYQANGYVKSA 638
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 86/210 (40%)
Query: 230 REMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQP 289
REM +PD S+++ + R + + M R L PDV Y + G
Sbjct: 156 REMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLY 215
Query: 290 DKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLF 349
K +L EM G P+V Y I + C ++ EA + + M G+ PN TY+
Sbjct: 216 SKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAM 275
Query: 350 FRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGF 409
+ + +++ ++ +Y ++ PN L+ F K ++ A L+ MV+ G
Sbjct: 276 IDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGV 335
Query: 410 GSYTLVSDVLFDLLCDMGKLGEAEKCFLEM 439
V + L C G + EA EM
Sbjct: 336 DPNLYVYNCLIHGHCKSGNMLEAVGLLSEM 365
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 136/292 (46%), Gaps = 6/292 (2%)
Query: 167 VPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGW---KTPEDA 222
VPD T F L+ LC+ + +A + ++ Q PNL T+N L+ G +DA
Sbjct: 360 VPDVVT--FTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDA 417
Query: 223 EVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGG 282
F M +GV P TY +D Y K + A + ++M+ + ++P+++ + +
Sbjct: 418 LELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYS 477
Query: 283 LGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPN 342
L G+ +A+ + +K+ G PD YN ++ + + EA L+ EM G P+
Sbjct: 478 LAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPD 537
Query: 343 ATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWG 402
N Y ++ + +W M+ RM + P + L+ K K++ A++L+
Sbjct: 538 VIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFE 597
Query: 403 DMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
MV+KG T+ + LFD LC ++ A K +M++ G P ++ I
Sbjct: 598 GMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTI 649
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 168/361 (46%), Gaps = 11/361 (3%)
Query: 93 RRKGFFHTAFSLDTMLYILGRSRMFNH---IWDLLIEARWKDQTLITPRTVMVVLARTAK 149
R GF A+S + ++++L +SR ++ +I ++ +L T ++MV L +
Sbjct: 180 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFR-PSLQTYSSLMVGLGKRRD 238
Query: 150 VCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQT 208
+ SV ++ L P+ T F +R L + + +A + + + P++ T
Sbjct: 239 IDSVMGLLKEMETLG-LKPNVYT--FTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVT 295
Query: 209 FNILLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMR 265
+ +L+ T + A+ F+KM+ PD VTY +L+D + R+L+ + EM
Sbjct: 296 YTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEME 355
Query: 266 ERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLR 325
+ PDV+T+T ++ L G +A D L M++ G P++ YN I RL
Sbjct: 356 KDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLD 415
Query: 326 EAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLI 385
+A +L M S G+ P A TY +F + S D S+ + +M G PN +C +
Sbjct: 416 DALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASL 475
Query: 386 RLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQK 445
K + A Q++ + + G ++ +++ +G++ EA K EM+E G +
Sbjct: 476 YSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCE 535
Query: 446 P 446
P
Sbjct: 536 P 536
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 100/204 (49%), Gaps = 3/204 (1%)
Query: 204 PNLQTFNI-LLSGWKTPEDAEV--FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKV 260
PN+ N L S K D E F ++++G+ PD VTYN ++ Y K E+++A K+
Sbjct: 466 PNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKL 525
Query: 261 LDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCI 320
L EM E PDVI S+I L + D+A + MKE P V YN +
Sbjct: 526 LSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGK 585
Query: 321 AKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQS 380
+++EA +L + M KG PN T+N F ++++ + M +MM +GC P+ +
Sbjct: 586 NGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFT 645
Query: 381 CMFLIRLFKKQEKVEMALQLWGDM 404
+I K +V+ A+ + M
Sbjct: 646 YNTIIFGLVKNGQVKEAMCFFHQM 669
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 100/222 (45%)
Query: 226 FKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGL 285
+KMRE G + +YN L+ + K R +A +V M P + TY+S++ GLG
Sbjct: 176 LRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGK 235
Query: 286 VGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATT 345
D +LKEM+ G P+V + IR A ++ EAY+++ M +G P+ T
Sbjct: 236 RRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVT 295
Query: 346 YNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMV 405
Y + + L + ++ +M P+ + + L+ F ++ Q W +M
Sbjct: 296 YTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEME 355
Query: 406 EKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPS 447
+ G + +L D LC G GEA M ++G P+
Sbjct: 356 KDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPN 397
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 131/313 (41%), Gaps = 8/313 (2%)
Query: 148 AKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLK-HQFRPNL 206
A + + Q V + +PD T +N LL + + + +Y + H+ N
Sbjct: 798 ADMIEIAQDVFLQVKSTGCIPDVAT--YNFLLDAYGKSGKIDELFELYKEMSTHECEANT 855
Query: 207 QTFNILLSGW---KTPEDA-EVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLD 262
T NI++SG +DA ++++ M + +P TY L+D K L +A ++ +
Sbjct: 856 ITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFE 915
Query: 263 EMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAK 322
M + P+ Y +I G G G+ D A + K M + G PD+ Y+ + C+
Sbjct: 916 GMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVG 975
Query: 323 RLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRM-MGLGCHPNTQSC 381
R+ E E+ GLNP+ YNL S+ L+ + +++ M G P+ +
Sbjct: 976 RVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTY 1035
Query: 382 MFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIE 441
LI VE A +++ ++ G + L GK A + M+
Sbjct: 1036 NSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVT 1095
Query: 442 KGQKPSNVSFRRI 454
G P+ ++ ++
Sbjct: 1096 GGFSPNTGTYEQL 1108
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 113/240 (47%), Gaps = 8/240 (3%)
Query: 136 TPRTVMVVLARTAKVCSVRQTVEFFRRFKK--LVPDFDTNCFNALLRTLCQEKSMTDARN 193
T T +V + K +E F + K + P+ C NA L +L + +A+
Sbjct: 432 TAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNI-VAC-NASLYSLAKAGRDREAKQ 489
Query: 194 VYHSLKH-QFRPNLQTFNILLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYC 249
+++ LK P+ T+N+++ + ++A +M E G PDV+ NSL++
Sbjct: 490 IFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLY 549
Query: 250 KGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVP 309
K +++A+K+ M+E L P V+TY +++ GLG G+ +A ++ + M + GC P+
Sbjct: 550 KADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTI 609
Query: 310 AYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRM 369
+N C + A ++ +M G P+ TYN + ++ + +H+M
Sbjct: 610 TFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM 669
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 154/365 (42%), Gaps = 49/365 (13%)
Query: 134 LITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLV-PDFDTNCFNALLRTLCQEKSMTDAR 192
+ T T++ L + +V ++ + FF + KKLV PDF T C LL + + + DA
Sbjct: 643 VFTYNTIIFGLVKNGQV---KEAMCFFHQMKKLVYPDFVTLC--TLLPGVVKASLIEDAY 697
Query: 193 NVYHSLKHQFR---PNLQTFNILLS--GWKTPEDAEVFFKKMREMGVTPDVVTY-NSLVD 246
+ + + NL +++ S ++A F +++ G+ D + ++
Sbjct: 698 KIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIR 757
Query: 247 VYCKGRELEKAYKVLDEM-RERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCY 305
CK + A + ++ ++ + P + TY +IGGL + A+DV ++K GC
Sbjct: 758 YSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCI 817
Query: 306 PDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNM 365
PDV YN + + + ++ E ++L EM++ N T+N+ + ++ + ++
Sbjct: 818 PDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDL 877
Query: 366 YHRMM-----------------GL-------------------GCHPNTQSCMFLIRLFK 389
Y+ +M GL GC PN LI F
Sbjct: 878 YYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFG 937
Query: 390 KQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNV 449
K + + A L+ MV++G VL D LC +G++ E F E+ E G P V
Sbjct: 938 KAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVV 997
Query: 450 SFRRI 454
+ I
Sbjct: 998 CYNLI 1002
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 119/273 (43%), Gaps = 4/273 (1%)
Query: 183 CQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKTPEDAEVFFKKMREMGVTPDVV--- 239
C SM + ++ +P+L + + G K+ D + F + + ++V
Sbjct: 59 CSVVSMKSSDFSGSMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTT 118
Query: 240 -TYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKE 298
T N +++ +LE+ V D M++R + D TY +I L + G +A L++
Sbjct: 119 ETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRK 178
Query: 299 MKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSND 358
M+E+G + +YN I ++ EA ++ M +G P+ TY+ D
Sbjct: 179 MREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRD 238
Query: 359 LQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDV 418
+ S + M LG PN + IR+ + K+ A ++ M ++G G + V
Sbjct: 239 IDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTV 298
Query: 419 LFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
L D LC KL A++ F +M KP V++
Sbjct: 299 LIDALCTARKLDCAKEVFEKMKTGRHKPDRVTY 331
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 76/174 (43%), Gaps = 30/174 (17%)
Query: 138 RTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHS 197
+T V++ V V + + +F+ K+ + D C+N ++ L + + +A +++
Sbjct: 962 KTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNE 1021
Query: 198 LKHQFRPNLQTFNILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKA 257
+K G+TPD+ TYNSL+ +E+A
Sbjct: 1022 MK------------------------------TSRGITPDLYTYNSLILNLGIAGMVEEA 1051
Query: 258 YKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAY 311
K+ +E++ L P+V T+ ++I G L G+P+ A V + M G P+ Y
Sbjct: 1052 GKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 184/401 (45%), Gaps = 26/401 (6%)
Query: 97 FFHTAFSLDTMLYILGRSRMFNHIWDLLIE-------ARWK-----DQTLI---TPRTVM 141
F HT+ SL M++IL RS + L+ +R + D T + +V
Sbjct: 109 FKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVF 168
Query: 142 VVLART-AKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-K 199
+L RT + +R+ E F + + NAL+ +L + + A VY + +
Sbjct: 169 DLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISR 228
Query: 200 HQFRPNLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEK 256
N+ T NI+++ E F +++E GV PD+VTYN+L+ Y +E+
Sbjct: 229 SGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEE 288
Query: 257 AYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIR 316
A+++++ M + SP V TY ++I GL G+ ++A++V EM G PD Y + +
Sbjct: 289 AFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLM 348
Query: 317 NFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHP 376
C + E + +M S+ + P+ ++ +F S +L + ++ + G P
Sbjct: 349 EACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIP 408
Query: 377 NTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCF 436
+ LI+ + ++ + +A+ L +M+++G + + + LC LGEA+K F
Sbjct: 409 DNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLF 468
Query: 437 LEMIEKGQKPSNVSFRRIKVLMELANRHEALQNLTQKMAVF 477
EM E+ P + + L L + H L NL M +F
Sbjct: 469 NEMTERALFPDSYT------LTILIDGHCKLGNLQNAMELF 503
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 155/329 (47%), Gaps = 19/329 (5%)
Query: 134 LITPRTVMVVLARTAKVCSVRQTVEFFRRFKK--LVPDFDTNCFNALLRTLCQEKSMTDA 191
L+ ++M + R+ ++ + + +F K+ L+PD + L++ C++ ++ A
Sbjct: 375 LVCFSSMMSLFTRSG---NLDKALMYFNSVKEAGLIPD--NVIYTILIQGYCRKGMISVA 429
Query: 192 RNVYHSLKHQ-FRPNLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDV 247
N+ + + Q ++ T+N +L G K +A+ F +M E + PD T L+D
Sbjct: 430 MNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDG 489
Query: 248 YCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPD 307
+CK L+ A ++ +M+E+ + DV+TY +++ G G VG D A+++ +M P
Sbjct: 490 HCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPT 549
Query: 308 VPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYH 367
+Y+ + C L EA+ + DEM SK + P N + + S + +
Sbjct: 550 PISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLE 609
Query: 368 RMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDV-----LFDL 422
+M+ G P+ S LI F ++E + A L M E+ G LV DV +
Sbjct: 610 KMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGG---LVPDVFTYNSILHG 666
Query: 423 LCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
C ++ EAE +MIE+G P ++
Sbjct: 667 FCRQNQMKEAEVVLRKMIERGVNPDRSTY 695
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 131/288 (45%), Gaps = 10/288 (3%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKTP---EDAEVFF 226
D+ + +LL C++ + + V+ ++ + P+L F+ ++S + + A ++F
Sbjct: 339 DSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF 398
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGL--- 283
++E G+ PD V Y L+ YC+ + A + +EM ++ + DV+TY +I+ GL
Sbjct: 399 NSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKR 458
Query: 284 GLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNA 343
++G+ DK + EM E +PD I C L+ A +L +M K + +
Sbjct: 459 KMLGEADK---LFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDV 515
Query: 344 TTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGD 403
TYN F D+ ++ ++ M+ P S L+ + + A ++W +
Sbjct: 516 VTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDE 575
Query: 404 MVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
M+ K ++ + + C G + E +MI +G P +S+
Sbjct: 576 MISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISY 623
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 86/174 (49%), Gaps = 6/174 (3%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGW---KTPEDAEVFFKKMR 230
++ L+ LC + + +A V+ + +P + N ++ G+ D E F +KM
Sbjct: 553 YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERD--LSPDVITYTSIIGGLGLVGQ 288
G PD ++YN+L+ + + + KA+ ++ +M E L PDV TY SI+ G Q
Sbjct: 613 SEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQ 672
Query: 289 PDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPN 342
+A VL++M E G PD Y I F L EA+ + DEM +G +P+
Sbjct: 673 MKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 136/292 (46%), Gaps = 7/292 (2%)
Query: 94 RKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSV 153
++G + +T+L+ L + +M D L + T+ +++ K+ ++
Sbjct: 438 QQGCAMDVVTYNTILHGLCKRKMLGEA-DKLFNEMTERALFPDSYTLTILIDGHCKLGNL 496
Query: 154 RQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNIL 212
+ +E F++ K+ D +N LL + + A+ ++ + + P +++IL
Sbjct: 497 QNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSIL 556
Query: 213 LSGWKTPED-AEVF--FKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDL 269
++ + AE F + +M + P V+ NS++ YC+ L++M
Sbjct: 557 VNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGF 616
Query: 270 SPDVITYTSIIGGLGLVGQPDKARDVLKEMKEY--GCYPDVPAYNAAIRNFCIAKRLREA 327
PD I+Y ++I G KA ++K+M+E G PDV YN+ + FC +++EA
Sbjct: 617 VPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEA 676
Query: 328 YDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQ 379
++ +M +G+NP+ +TY F ++L ++ ++ M+ G P+ +
Sbjct: 677 EVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDK 728
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 153/317 (48%), Gaps = 38/317 (11%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNIL---LSGWKTPEDAEVFFKKMR 230
FN ++ +LC+ + + A +++ ++ + RPN+ T+N L L + DA M
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
E + P+VVT+N+L+D + K +L +A K+ +EM +R + PD ITY +I G + + D
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
+A+ + K M C P++ YN I FC KR+ + +L EM+ +GL N TY
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Query: 351 RIFYWSNDLQSSWNMYHRMM----------------GLGCHPNTQSCMFLIRLFKKQEKV 394
+ F+ + D S+ ++ +M+ GL + + + + + +K E +
Sbjct: 441 QGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSE-M 499
Query: 395 EMALQLWGDMVEKG------------FGSYTLVSDV-----LFDLLCDMGKLGEAEKCFL 437
E+ + ++ M+E F S ++ DV + LC L EA+ F
Sbjct: 500 ELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFR 559
Query: 438 EMIEKGQKPSNVSFRRI 454
+M E G P++ ++ +
Sbjct: 560 KMKEDGTLPNSGTYNTL 576
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 135/283 (47%), Gaps = 5/283 (1%)
Query: 171 DTNCFNALLRTLCQEKSMTDARN-VYHSLKHQFRPNLQTFNILLSGWKTPEDAEV---FF 226
DT F L+ L ++A V ++ +P+L T+ +++G D ++
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
KM + +VV +N+++D CK R +E A + EM + + P+V+TY S+I L
Sbjct: 247 NKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNY 306
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
G+ A +L M E P+V +NA I F +L EA L +EM + ++P+ TY
Sbjct: 307 GRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITY 366
Query: 347 NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE 406
NL F N L + M+ M+ C PN Q+ LI F K ++VE ++L+ +M +
Sbjct: 367 NLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQ 426
Query: 407 KGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNV 449
+G T+ + G A+ F +M+ + P+++
Sbjct: 427 RGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSN-RVPTDI 468
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 144/323 (44%), Gaps = 44/323 (13%)
Query: 168 PDFDTNCFNALLRTLCQEKSMTDARNVYHSLKH-QFRPNLQTFNIL---LSGWKTPEDAE 223
PD T + ++ LC+ + A N+ + ++ + + N+ FN + L ++ E A
Sbjct: 221 PDLVT--YGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAV 278
Query: 224 VFFKKMREMGVTPDVVTYNSLVDVYCK-GR------------------------------ 252
F +M G+ P+VVTYNSL++ C GR
Sbjct: 279 DLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAF 338
Query: 253 ----ELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDV 308
+L +A K+ +EM +R + PD ITY +I G + + D+A+ + K M C P++
Sbjct: 339 FKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNI 398
Query: 309 PAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHR 368
YN I FC KR+ + +L EM+ +GL N TY + F+ + D S+ ++ +
Sbjct: 399 QTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQ 458
Query: 369 MMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGK 428
M+ + + L+ K++ AL ++ + + + + + + +C GK
Sbjct: 459 MVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGK 518
Query: 429 LGEAEKCFLEMIEKGQKPSNVSF 451
+GEA F + KP V++
Sbjct: 519 VGEAWDLFCSL---SIKPDVVTY 538
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 109/230 (47%)
Query: 222 AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIG 281
A KM ++G PD+VT +SL++ YC + + A ++D+M E PD T+T++I
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196
Query: 282 GLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNP 341
GL L + +A ++ +M + GC PD+ Y + C + A +L+++M + +
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKA 256
Query: 342 NATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLW 401
N +N ++ + +++ M G PN + LI + A +L
Sbjct: 257 NVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLL 316
Query: 402 GDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+M+EK + + L D GKL EAEK EMI++ P +++
Sbjct: 317 SNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITY 366
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 118/254 (46%), Gaps = 3/254 (1%)
Query: 204 PNLQTFNILLSGWKTPEDAEVFF---KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKV 260
P++ FN LLS E+ ++M+ +G++ D+ TY+ ++ +C+ +L A V
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 261 LDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCI 320
L +M + PD++T +S++ G + A ++ +M E G PD + I +
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 321 AKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQS 380
+ EA LVD+M +G P+ TY D+ + N+ ++M N
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 381 CMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMI 440
+I K VE+A+ L+ +M KG + + L + LC+ G+ +A + M+
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 441 EKGQKPSNVSFRRI 454
EK P+ V+F +
Sbjct: 321 EKKINPNVVTFNAL 334
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 139/320 (43%), Gaps = 56/320 (17%)
Query: 164 KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGW---KTP 219
KK+ P+ T FNAL+ +E + +A ++ + + P+ T+N+L++G+
Sbjct: 322 KKINPNVVT--FNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRL 379
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
++A+ FK M P++ TYN+L++ +CK + +E ++ EM +R L + +TYT+I
Sbjct: 380 DEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTI 439
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPA----------------------------- 310
I G G D A+ V K+M D+
Sbjct: 440 IQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM 499
Query: 311 ------YNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWN 364
YN I C A ++ EA+DL S + P+ TYN LQ + +
Sbjct: 500 ELNIFIYNTMIEGMCKAGKVGEAWDL---FCSLSIKPDVVTYNTMISGLCSKRLLQEADD 556
Query: 365 MYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGF----GSYTLVSDVLF 420
++ +M G PN+ + LIR + + +L +M GF + +LV+++L
Sbjct: 557 LFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLH 616
Query: 421 DLLCDMGKLGEAEKCFLEMI 440
D G +K FL M+
Sbjct: 617 D--------GRLDKSFLNML 628
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 122/288 (42%), Gaps = 15/288 (5%)
Query: 167 VPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKTPEDAEVFF 226
VP F FN L + C E+S A Y + LS +DA F
Sbjct: 27 VPSF----FN-LCGSGCWERSFASASGDYREILRN----------RLSDIIKVDDAVDLF 71
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
M + P +V +N L+ K + E + ++M+ +S D+ TY+ I
Sbjct: 72 GDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRR 131
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
Q A VL +M + G PD+ ++ + +C +KR+ +A LVD+M G P+ T+
Sbjct: 132 SQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTF 191
Query: 347 NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE 406
+ N + + +M+ GC P+ + ++ K+ +++AL L M
Sbjct: 192 TTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEA 251
Query: 407 KGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
+ ++ + + D LC + A F EM KG +P+ V++ +
Sbjct: 252 ARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 72/137 (52%), Gaps = 6/137 (4%)
Query: 159 FFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKT 218
F+ +K + + +N ++ +C+ + +A +++ SL +P++ T+N ++SG +
Sbjct: 490 IFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL--SIKPDVVTYNTMISGLCS 547
Query: 219 P---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVIT 275
++A+ F+KM+E G P+ TYN+L+ + + + +++ EMR D T
Sbjct: 548 KRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDAST 607
Query: 276 YTSIIGGLGLVGQPDKA 292
S++ + G+ DK+
Sbjct: 608 -ISLVTNMLHDGRLDKS 623
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 151/332 (45%), Gaps = 43/332 (12%)
Query: 80 NPSQTLE-FYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPR 138
+P + L F++Y + GF H S +++Y L +SR F+ + +L R+++
Sbjct: 61 DPEEALSLFHQY--QEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRN-VRCRES 117
Query: 139 TVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL 198
M ++ K SV + ++ F + N L+ L + A++ +
Sbjct: 118 LFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGA 177
Query: 199 KH-QFRPNLQTFNILLSGWKTPEDAEV---FFKKMREMGVTPDVVTYNSLVDVYCKGREL 254
K + RPN +FNIL+ G+ D E F +M EM V P VVTYNSL+ C+ ++
Sbjct: 178 KDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDM 237
Query: 255 EKAYKVLDEMRERDLSPDVITYTSIIGGL-----------------------GLV----- 286
KA +L++M ++ + P+ +T+ ++ GL GLV
Sbjct: 238 GKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGIL 297
Query: 287 -------GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
G+ D+A+ +L EMK+ PDV YN + + C R+ EAY ++ EM KG
Sbjct: 298 MSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGC 357
Query: 340 NPNATTYNLFFRIFYWSNDLQSSWNMYHRMMG 371
PNA TY + F D S N+ + M+
Sbjct: 358 KPNAATYRMMIDGFCRIEDFDSGLNVLNAMLA 389
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 103/227 (45%)
Query: 226 FKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGL 285
F K+ + + N+L++V ELEKA D ++ L P+ +++ +I G
Sbjct: 139 FHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLD 198
Query: 286 VGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATT 345
+ A V EM E P V YN+ I C + +A L+++M K + PNA T
Sbjct: 199 KCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVT 258
Query: 346 YNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMV 405
+ L + + + + M GC P + L+ K+ +++ A L G+M
Sbjct: 259 FGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMK 318
Query: 406 EKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFR 452
++ ++ ++L + LC ++ EA + EM KG KP+ ++R
Sbjct: 319 KRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYR 365
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 104/233 (44%)
Query: 219 PEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTS 278
PE+A F + +EMG D +Y+SL+ K R + ++L +R R++ +
Sbjct: 62 PEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMG 121
Query: 279 IIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKG 338
+I G G DKA DV ++ + C + + N I L +A D
Sbjct: 122 LIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMR 181
Query: 339 LNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMAL 398
L PN+ ++N+ + F D +++ ++ M+ + P+ + LI + + + A
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 399 QLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
L DM++K + +L LC G+ EA+K +M +G KP V++
Sbjct: 242 SLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNY 294
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 130/303 (42%), Gaps = 22/303 (7%)
Query: 65 ELIDQVLKRVRFSHANPSQTL-----EFYRYTG---RRKGFFHTAFSLDTMLYILGRSRM 116
+ +DQ+L+ VR+ + ++L + Y G + FH S D + I + +
Sbjct: 98 DAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTL 157
Query: 117 FNHIWD--LLIEAR-----WKDQTLITPRTVM--VVLARTAKVCSVRQTVEFFRRFKKLV 167
N + D L +A+ KD L P +V +++ C + F ++
Sbjct: 158 INVLVDNGELEKAKSFFDGAKDMRL-RPNSVSFNILIKGFLDKCDWEAACKVFDEMLEME 216
Query: 168 PDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTP---EDAE 223
+N+L+ LC+ M A+++ + K + RPN TF +L+ G +A+
Sbjct: 217 VQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAK 276
Query: 224 VFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGL 283
M G P +V Y L+ K +++A +L EM++R + PDV+ Y ++ L
Sbjct: 277 KLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHL 336
Query: 284 GLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNA 343
+ +A VL EM+ GC P+ Y I FC + ++++ M + P
Sbjct: 337 CTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTP 396
Query: 344 TTY 346
T+
Sbjct: 397 ATF 399
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 154/327 (47%), Gaps = 13/327 (3%)
Query: 133 TLITPRTVMVVLARTAKVCSVRQTV-EFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDA 191
+ ++ + +M+ L + + V E RR K+ P+ T FN ++ LC+ M A
Sbjct: 187 SALSCKPLMIALLKENRSADVEYVYKEMIRR--KIQPNVFT--FNVVINALCKTGKMNKA 242
Query: 192 RNVYHSLK-HQFRPNLQTFNILLSGW------KTPEDAEVFFKKMREMGVTPDVVTYNSL 244
R+V +K + PN+ ++N L+ G+ A+ K+M E V+P++ T+N L
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNIL 302
Query: 245 VDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGC 304
+D + K L + KV EM ++D+ P+VI+Y S+I GL G+ +A + +M G
Sbjct: 303 IDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGV 362
Query: 305 YPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWN 364
P++ YNA I FC L+EA D+ + +G P YN+ + + +
Sbjct: 363 QPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFA 422
Query: 365 MYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLC 424
+ M G P+ + LI + +E A +L+ + KG + +L + C
Sbjct: 423 LKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDL-VTFHILMEGYC 481
Query: 425 DMGKLGEAEKCFLEMIEKGQKPSNVSF 451
G+ +A EM + G KP ++++
Sbjct: 482 RKGESRKAAMLLKEMSKMGLKPRHLTY 508
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 115/482 (23%), Positives = 210/482 (43%), Gaps = 72/482 (14%)
Query: 25 LLSSTLNDGDVHRVMTIITTTSSPENLRQSLKSSGVFLSNELIDQVLKRVRFSHANPSQ- 83
L + +G H+V +I S +N+ N +I +L ++AN S+
Sbjct: 123 FLDGFVRNGSDHQVHSIFHAISMCDNV----------CVNSIIADML---VLAYANNSRF 169
Query: 84 TLEFYRYTGRRKGFFH---TAFSLDTMLYIL---GRSRMFNHIWDLLIEARWKDQTLITP 137
L F + +R G++ +A S ++ L RS +++ +I + + + T
Sbjct: 170 ELGFEAF--KRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQ-PNVFTF 226
Query: 138 RTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQ---EKSMTDARNV 194
V+ L +T K+ R +E + + P+ + +N L+ C+ M A V
Sbjct: 227 NVVINALCKTGKMNKARDVMEDMKVYG-CSPNVVS--YNTLIDGYCKLGGNGKMYKADAV 283
Query: 195 YHSL-KHQFRPNLQTFNILLSG-WKT---PEDAEVFFKKMREMGVTPDVVTYNSLVDVYC 249
+ ++ PNL TFNIL+ G WK P +VF K+M + V P+V++YNSL++ C
Sbjct: 284 LKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVF-KEMLDQDVKPNVISYNSLINGLC 342
Query: 250 KGRELEKAYKVLDEMRERDLSPDVITYTSIIGGL-------------------GLV---- 286
G ++ +A + D+M + P++ITY ++I G G V
Sbjct: 343 NGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTR 402
Query: 287 ------------GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEM 334
G+ D + +EM+ G PDV YN I C + A L D++
Sbjct: 403 MYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQL 462
Query: 335 TSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKV 394
TSKGL P+ T+++ + + + + + M +G P + +++ + K+ +
Sbjct: 463 TSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNL 521
Query: 395 EMALQLWGDMVEKGFGSYTLVS-DVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRR 453
+ A + M ++ + S +VL GKL +A EM+EKG P+ +++
Sbjct: 522 KAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEI 581
Query: 454 IK 455
+K
Sbjct: 582 VK 583
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 153/321 (47%), Gaps = 31/321 (9%)
Query: 121 WDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVP-DFDTNC--FNA 177
+++LI+ WKD L P ++ V FK+++ D N +N+
Sbjct: 299 FNILIDGFWKDDNL--PGSMKV--------------------FKEMLDQDVKPNVISYNS 336
Query: 178 LLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTPE---DAEVFFKKMREMG 233
L+ LC +++A ++ + +PNL T+N L++G+ + +A F ++ G
Sbjct: 337 LINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQG 396
Query: 234 VTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKAR 293
P YN L+D YCK +++ + + +EM + PDV TY +I GL G + A+
Sbjct: 397 AVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAK 456
Query: 294 DVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIF 353
+ ++ G PD+ ++ + +C R+A L+ EM+ GL P TYN+ + +
Sbjct: 457 KLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGY 515
Query: 354 YWSNDLQSSWNMYHRM-MGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSY 412
+L+++ NM +M N S L++ + ++ K+E A L +M+EKG
Sbjct: 516 CKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPN 575
Query: 413 TLVSDVLFDLLCDMGKLGEAE 433
+ +++ + + D G + + E
Sbjct: 576 RITYEIVKEEMVDQGFVPDIE 596
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 136/301 (45%), Gaps = 9/301 (2%)
Query: 186 KSMTDARNVYHSLKHQFRPNLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYN 242
+++ A V L+ +P++ +N L++G+ +DA +MR +PD VTYN
Sbjct: 138 RNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYN 197
Query: 243 SLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEY 302
++ C +L+ A KVL+++ + P VITYT +I L G D+A ++ EM
Sbjct: 198 IMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSR 257
Query: 303 GCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSS 362
G PD+ YN IR C + A+++V + KG P+ +YN+ R +
Sbjct: 258 GLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEG 317
Query: 363 WNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDL 422
+ +M C PN + LI + K+E A+ L M EKG D L
Sbjct: 318 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 377
Query: 423 LCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEALQNLTQKMAVFGRPVQ 482
C G+L A + MI G P V++ VL L +A Q + +FG+ +
Sbjct: 378 FCREGRLDVAIEFLETMISDGCLPDIVNYN--TVLATLCKNGKA----DQALEIFGKLGE 431
Query: 483 V 483
V
Sbjct: 432 V 432
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 140/292 (47%), Gaps = 6/292 (2%)
Query: 164 KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKTP--- 219
+ L PD T +N ++R +C+E + A + +L+ + P++ ++NILL
Sbjct: 257 RGLKPDMFT--YNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKW 314
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
E+ E KM P+VVTY+ L+ C+ ++E+A +L M+E+ L+PD +Y +
Sbjct: 315 EEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPL 374
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
I G+ D A + L+ M GC PD+ YN + C + +A ++ ++ G
Sbjct: 375 IAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGC 434
Query: 340 NPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQ 399
+PN+++YN F + S D + +M MM G P+ + +I ++ V+ A +
Sbjct: 435 SPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFE 494
Query: 400 LWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
L DM F + +++ C ++ +A M+ G +P+ ++
Sbjct: 495 LLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTY 546
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 135/294 (45%), Gaps = 6/294 (2%)
Query: 162 RFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTPE 220
R K PD T +N ++ +LC + A V + L +P + T+ IL+
Sbjct: 185 RSKDFSPD--TVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEG 242
Query: 221 DAEVFFKKMREM---GVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYT 277
+ K M EM G+ PD+ TYN+++ CK +++A++++ + + PDVI+Y
Sbjct: 243 GVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYN 302
Query: 278 SIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSK 337
++ L G+ ++ ++ +M C P+V Y+ I C ++ EA +L+ M K
Sbjct: 303 ILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK 362
Query: 338 GLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMA 397
GL P+A +Y+ F L + M+ GC P+ + ++ K K + A
Sbjct: 363 GLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQA 422
Query: 398 LQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
L+++G + E G + + +F L G A LEM+ G P +++
Sbjct: 423 LEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITY 476
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 117/235 (49%), Gaps = 4/235 (1%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKTPEDAEV---FFKKMR 230
++ L+ TLC++ + +A N+ +K + P+ +++ L++ + +V F + M
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
G PD+V YN+++ CK + ++A ++ ++ E SP+ +Y ++ L G
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
+A ++ EM G PD YN+ I C + EA++L+ +M S +P+ TYN+
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMV 405
F ++ ++ + N+ M+G GC PN + LI A++L D+V
Sbjct: 516 LGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 100/262 (38%), Gaps = 36/262 (13%)
Query: 225 FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLG 284
+ M G PDV+ L+ + R + KA +V+ E+ E+ PDV Y ++I G
Sbjct: 111 LLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVFAYNALINGFC 169
Query: 285 LVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRL-------------------- 324
+ + D A VL M+ PD YN I + C +L
Sbjct: 170 KMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVI 229
Query: 325 ---------------REAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRM 369
EA L+DEM S+GL P+ TYN R + ++ M +
Sbjct: 230 TYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNL 289
Query: 370 MGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKL 429
GC P+ S L+R Q K E +L M + + +L LC GK+
Sbjct: 290 ELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKI 349
Query: 430 GEAEKCFLEMIEKGQKPSNVSF 451
EA M EKG P S+
Sbjct: 350 EEAMNLLKLMKEKGLTPDAYSY 371
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 96/203 (47%), Gaps = 1/203 (0%)
Query: 249 CKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDV 308
C+ ++ +L+ M + +PDVI T +I G + KA V++ ++++G PDV
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 309 PAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHR 368
AYNA I FC R+ +A ++D M SK +P+ TYN+ L + + ++
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 369 MMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGK 428
++ C P + LI + V+ AL+L +M+ +G + + +C G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 429 LGEAEKCFLEMIEKGQKPSNVSF 451
+ A + + KG +P +S+
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISY 301
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 168/365 (46%), Gaps = 6/365 (1%)
Query: 90 YTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEA-RWKDQTLITPRTVMV-VLART 147
Y + KGF+ + + +L +L R + W + R + ++ + +M+ VL +
Sbjct: 179 YLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKE 238
Query: 148 AKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNL 206
K+ + + F + P T +N L++ + AR + +K + F+P++
Sbjct: 239 GKLKKAKGFLGIMEVFG-IKPTIVT--YNTLVQGFSLRGRIEGARLIISEMKSKGFQPDM 295
Query: 207 QTFNILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRE 266
QT+N +LS A ++M+E+G+ PD V+YN L+ +LE A+ DEM +
Sbjct: 296 QTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVK 355
Query: 267 RDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLRE 326
+ + P TY ++I GL + + + A +++E++E G D YN I +C ++
Sbjct: 356 QGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKK 415
Query: 327 AYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIR 386
A+ L DEM + G+ P TY + N + + ++ +++G G P+ L+
Sbjct: 416 AFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMD 475
Query: 387 LFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKP 446
++ A L +M + + L LC GK EA + EM +G KP
Sbjct: 476 GHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKP 535
Query: 447 SNVSF 451
++S+
Sbjct: 536 DHISY 540
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 150/308 (48%), Gaps = 7/308 (2%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFN---ILLSGWKTPEDAEVFFKKMR 230
F+ L+R CQ + + +A ++ +K + F P +T N LLS E+A VF+ M
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
M + +V T+N +++V CK +L+KA L M + P ++TY +++ G L G+ +
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIE 277
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
AR ++ EMK G PD+ YN + C R A +++ EM GL P++ +YN+
Sbjct: 278 GARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILI 334
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG 410
R + DL+ ++ M+ G P + LI + K+E A L ++ EKG
Sbjct: 335 RGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIV 394
Query: 411 SYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEALQNL 470
++ ++L + C G +A EM+ G +P+ ++ + ++ N+ L
Sbjct: 395 LDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADEL 454
Query: 471 TQKMAVFG 478
+K+ G
Sbjct: 455 FEKVVGKG 462
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 145/331 (43%), Gaps = 19/331 (5%)
Query: 150 VCSVRQTVEFFRRFKK--LVPDFDTNCFNALLRTLCQEKSMTDARNVYHS--LKHQFRPN 205
+C+ + E R K+ LVPD + +N L+R C + Y +K P
Sbjct: 305 MCNEGRASEVLREMKEIGLVPD--SVSYNILIRG-CSNNGDLEMAFAYRDEMVKQGMVPT 361
Query: 206 LQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLD 262
T+N L+ G E AE+ +++RE G+ D VTYN L++ YC+ + +KA+ + D
Sbjct: 362 FYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHD 421
Query: 263 EMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAK 322
EM + P TYTS+I L + +A ++ +++ G PD+ N + C
Sbjct: 422 EMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIG 481
Query: 323 RLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCM 382
+ A+ L+ EM +NP+ TYN R + + + M G P+ S
Sbjct: 482 NMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYN 541
Query: 383 FLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEK 442
LI + K+ + A + +M+ GF L + L L + AE+ EM +
Sbjct: 542 TLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSE 601
Query: 443 GQKPSNVSFRRIKVLMELANRHEALQNLTQK 473
G P++ SF + EA+ NL K
Sbjct: 602 GIVPNDSSFCSVI---------EAMSNLDAK 623
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 91/189 (48%), Gaps = 11/189 (5%)
Query: 133 TLITPRTVMVVLARTAKVCSVRQTVEFFRRF--KKLVPDFDTNCFNALLRTLCQEKSMTD 190
T T +++ VL R K R+ E F + K + PD N L+ C +M
Sbjct: 431 TQFTYTSLIYVLCRKNKT---READELFEKVVGKGMKPDLVM--MNTLMDGHCAIGNMDR 485
Query: 191 ARNVYHSLKH-QFRPNLQTFNIL---LSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVD 246
A ++ + P+ T+N L L G E+A +M+ G+ PD ++YN+L+
Sbjct: 486 AFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLIS 545
Query: 247 VYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYP 306
Y K + + A+ V DEM +P ++TY +++ GL + + A ++L+EMK G P
Sbjct: 546 GYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVP 605
Query: 307 DVPAYNAAI 315
+ ++ + I
Sbjct: 606 NDSSFCSVI 614
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 140/308 (45%), Gaps = 5/308 (1%)
Query: 176 NALLRTLCQEKSMTDARNVY-HSLKHQFRPNLQTFNIL---LSGWKTPEDAEVFFKKMRE 231
N+LL TL + + DA ++ L+ Q + +TFNIL L G E A M
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 232 MGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDL-SPDVITYTSIIGGLGLVGQPD 290
G PD+VTYN+L+ +CK EL KA ++ +++ + SPDV+TYTS+I G G+
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
+A +L +M G YP +N + + A + A ++ +M S G P+ T+
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG 410
+ + + ++ M G PN + LI + ++ A +L G + K
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414
Query: 411 SYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEALQNL 470
+ + + D C GK+ EA EM +K KP ++F + + + R ++
Sbjct: 415 PQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSI 474
Query: 471 TQKMAVFG 478
KM G
Sbjct: 475 FHKMVAIG 482
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 115/237 (48%), Gaps = 6/237 (2%)
Query: 168 PDFDTNCFNALLRTLCQEKSMTDARNVYHS-LKHQFRPNLQTFNILLSGWKTPED---AE 223
PD T + +++ C+ M +A ++ L+ P TFN+L+ G+ + AE
Sbjct: 275 PDVVT--YTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 224 VFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGL 283
KM G PDVVT+ SL+D YC+ ++ + +++ +EM R + P+ TY+ +I L
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
Query: 284 GLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNA 343
+ KAR++L ++ P YN I FC A ++ EA +V+EM K P+
Sbjct: 393 CNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDK 452
Query: 344 TTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQL 400
T+ + + + +++H+M+ +GC P+ + L+ K + A L
Sbjct: 453 ITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 85/179 (47%), Gaps = 7/179 (3%)
Query: 168 PDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKTPE---DAE 223
PD T F +L+ C+ ++ ++ + + PN T++IL++ A
Sbjct: 345 PDVVT--FTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAR 402
Query: 224 VFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGL 283
++ + P YN ++D +CK ++ +A +++EM ++ PD IT+T +I G
Sbjct: 403 ELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGH 462
Query: 284 GLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPN 342
+ G+ +A + +M GC PD ++ + A +EAY L +++ KG + N
Sbjct: 463 CMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-NQIARKGQSNN 520
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 140/308 (45%), Gaps = 5/308 (1%)
Query: 176 NALLRTLCQEKSMTDARNVY-HSLKHQFRPNLQTFNIL---LSGWKTPEDAEVFFKKMRE 231
N+LL TL + + DA ++ L+ Q + +TFNIL L G E A M
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 232 MGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDL-SPDVITYTSIIGGLGLVGQPD 290
G PD+VTYN+L+ +CK EL KA ++ +++ + SPDV+TYTS+I G G+
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
+A +L +M G YP +N + + A + A ++ +M S G P+ T+
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG 410
+ + + ++ M G PN + LI + ++ A +L G + K
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414
Query: 411 SYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEALQNL 470
+ + + D C GK+ EA EM +K KP ++F + + + R ++
Sbjct: 415 PQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSI 474
Query: 471 TQKMAVFG 478
KM G
Sbjct: 475 FHKMVAIG 482
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 115/237 (48%), Gaps = 6/237 (2%)
Query: 168 PDFDTNCFNALLRTLCQEKSMTDARNVYHS-LKHQFRPNLQTFNILLSGWKTPED---AE 223
PD T + +++ C+ M +A ++ L+ P TFN+L+ G+ + AE
Sbjct: 275 PDVVT--YTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 224 VFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGL 283
KM G PDVVT+ SL+D YC+ ++ + +++ +EM R + P+ TY+ +I L
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
Query: 284 GLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNA 343
+ KAR++L ++ P YN I FC A ++ EA +V+EM K P+
Sbjct: 393 CNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDK 452
Query: 344 TTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQL 400
T+ + + + +++H+M+ +GC P+ + L+ K + A L
Sbjct: 453 ITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 85/179 (47%), Gaps = 7/179 (3%)
Query: 168 PDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKTPE---DAE 223
PD T F +L+ C+ ++ ++ + + PN T++IL++ A
Sbjct: 345 PDVVT--FTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAR 402
Query: 224 VFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGL 283
++ + P YN ++D +CK ++ +A +++EM ++ PD IT+T +I G
Sbjct: 403 ELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGH 462
Query: 284 GLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPN 342
+ G+ +A + +M GC PD ++ + A +EAY L +++ KG + N
Sbjct: 463 CMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-NQIARKGQSNN 520
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 132/270 (48%), Gaps = 4/270 (1%)
Query: 171 DTNCFNALLRTLCQEKSMTDARN-VYHSLKHQFRPNLQTFNILLSGWKTPED---AEVFF 226
D C+N+L+ L + K M +AR+ + +++ +PN T+ +SG+ + A+ +
Sbjct: 486 DIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYV 545
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
K+MRE GV P+ V L++ YCK ++ +A M ++ + D TYT ++ GL
Sbjct: 546 KEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKN 605
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
+ D A ++ +EM+ G PDV +Y I F +++A + DEM +GL PN Y
Sbjct: 606 DKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIY 665
Query: 347 NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE 406
N+ F S +++ + + M G HPN + +I + K + A +L+ +M
Sbjct: 666 NMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL 725
Query: 407 KGFGSYTLVSDVLFDLLCDMGKLGEAEKCF 436
KG + V L D C + + A F
Sbjct: 726 KGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 139/307 (45%), Gaps = 4/307 (1%)
Query: 152 SVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFN 210
+VRQ E KK + +++ +C + A N+ + RPN+ +
Sbjct: 397 NVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYT 456
Query: 211 ILLSGWKTPE---DAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRER 267
L+ + DA K+M+E G+ PD+ YNSL+ K + +++A L EM E
Sbjct: 457 TLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN 516
Query: 268 DLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREA 327
L P+ TY + I G + A +KEM+E G P+ I +C ++ EA
Sbjct: 517 GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEA 576
Query: 328 YDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRL 387
M +G+ +A TY + + ++ + + ++ M G G P+ S LI
Sbjct: 577 CSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLING 636
Query: 388 FKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPS 447
F K ++ A ++ +MVE+G ++ ++L C G++ +A++ EM KG P+
Sbjct: 637 FSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPN 696
Query: 448 NVSFRRI 454
V++ I
Sbjct: 697 AVTYCTI 703
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 134/307 (43%), Gaps = 25/307 (8%)
Query: 170 FDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFR----------------------PNLQ 207
FD ++ L+ C+ ++ ++V + +FR P
Sbjct: 219 FDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKY 278
Query: 208 TFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEM 264
T+++L+ G K EDA+ +M +GV+ D TY+ L+D KGR + A ++ EM
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 265 RERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRL 324
++ Y I + G +KA+ + M G P AY + I +C K +
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398
Query: 325 REAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFL 384
R+ Y+L+ EM + + + TY + S DL ++N+ M+ GC PN L
Sbjct: 399 RQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTL 458
Query: 385 IRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQ 444
I+ F + + A+++ +M E+G + L L ++ EA +EM+E G
Sbjct: 459 IKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL 518
Query: 445 KPSNVSF 451
KP+ ++
Sbjct: 519 KPNAFTY 525
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 143/320 (44%), Gaps = 12/320 (3%)
Query: 166 LVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNL----QTFNILLSGWKTPED 221
L+P + +L+ C+EK++ R Y L + N+ T+ ++ G + D
Sbjct: 378 LIPQ--AQAYASLIEGYCREKNV---RQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGD 432
Query: 222 AEVFFKKMREM---GVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTS 278
+ + ++EM G P+VV Y +L+ + + A +VL EM+E+ ++PD+ Y S
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS 492
Query: 279 IIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKG 338
+I GL + D+AR L EM E G P+ Y A I + A A V EM G
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG 552
Query: 339 LNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMAL 398
+ PN + + + + Y M+ G + ++ L+ K +KV+ A
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAE 612
Query: 399 QLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLM 458
+++ +M KG VL + +G + +A F EM+E+G P+ + + +
Sbjct: 613 EIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGF 672
Query: 459 ELANRHEALQNLTQKMAVFG 478
+ E + L +M+V G
Sbjct: 673 CRSGEIEKAKELLDEMSVKG 692
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 125/271 (46%), Gaps = 14/271 (5%)
Query: 131 DQTLIT-PRTVMVVLARTAKVCSVRQTVEFFR--RFKKLVPDFDTNCFNALLRTLCQEKS 187
DQ ++ +T V++ K V E FR R K + PD + + L+ + +
Sbjct: 585 DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFS--YGVLINGFSKLGN 642
Query: 188 MTDARNVYHSLKHQ-FRPNLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNS 243
M A +++ + + PN+ +N+LL G+ E A+ +M G+ P+ VTY +
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 244 LVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYG 303
++D YCK +L +A+++ DEM+ + L PD YT+++ G + ++A + K+ G
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-G 761
Query: 304 CYPDVPAYNAAIR---NFCIAKRLREAYD-LVDEMTSKGLNPNATTYNLFFRIFYWSNDL 359
C +NA I F + E + L+D + PN TYN+ +L
Sbjct: 762 CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNL 821
Query: 360 QSSWNMYHRMMGLGCHPNTQSCMFLIRLFKK 390
+++ ++H+M P + L+ + K
Sbjct: 822 EAAKELFHQMQNANLMPTVITYTSLLNGYDK 852
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 109/253 (43%), Gaps = 21/253 (8%)
Query: 151 CSVRQTVEFFRRF-----KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPN 205
C E FR F K LVPD + + L+ C+ + A ++ + K +
Sbjct: 708 CKSGDLAEAFRLFDEMKLKGLVPD--SFVYTTLVDGCCRLNDVERAITIFGTNKKGCASS 765
Query: 206 LQTFNILLSGW-----KTPEDAEVFFKKMR---EMGVTPDVVTYNSLVDVYCKGRELEKA 257
FN L++ W KT EV + M + P+ VTYN ++D CK LE A
Sbjct: 766 TAPFNALIN-WVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAA 824
Query: 258 YKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRN 317
++ +M+ +L P VITYTS++ G +G+ + V E G PD Y+ I
Sbjct: 825 KELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINA 884
Query: 318 FCIAKRLREAYDLVDEMTSK-----GLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGL 372
F +A LVD+M +K G + +T F +++ + + M+ L
Sbjct: 885 FLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRL 944
Query: 373 GCHPNTQSCMFLI 385
P++ + + LI
Sbjct: 945 QYIPDSATVIELI 957
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 87/181 (48%), Gaps = 13/181 (7%)
Query: 160 FRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKH-QFRPNLQTFNILLSGW-K 217
F RF K P+ T +N ++ LC+E ++ A+ ++H +++ P + T+ LL+G+ K
Sbjct: 797 FDRFGK--PNDVT--YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDK 852
Query: 218 TPEDAEVF--FKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPD--- 272
AE+F F + G+ PD + Y+ +++ + K KA ++D+M ++ D
Sbjct: 853 MGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCK 912
Query: 273 --VITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDL 330
+ T +++ G VG+ + A V++ M PD I CI+ R D
Sbjct: 913 LSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQRVEADA 972
Query: 331 V 331
V
Sbjct: 973 V 973
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 127/345 (36%), Gaps = 57/345 (16%)
Query: 119 HIWDLLIEARWKDQTL-------ITPRTVMVVLARTAKVCSVRQTVEFFRRF-KKLVPDF 170
I +L + W+D + I P V+ VL R+ +V + + FF + V +
Sbjct: 37 EIAGILKQENWRDTLVSSNLSIEINPEVVLSVL-RSKRVDDPSKLLSFFNWVDSQKVTEQ 95
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQT--------------------FN 210
+ F+ L LC S A +V + + P + F
Sbjct: 96 KLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFG 155
Query: 211 ILLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRER 267
IL G+ E+A F + + P + L+D + L+ + V M ER
Sbjct: 156 ILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVER 215
Query: 268 DLSPDVITYTSIIGGLGLVGQPDKARDVL-KEMKEY--------------------GCYP 306
++ DV TY +I G +DVL K KE+ G P
Sbjct: 216 NVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVP 275
Query: 307 DVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMY 366
Y+ I C KRL +A L+ EM S G++ + TY+L + ++ +
Sbjct: 276 LKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLV 335
Query: 367 HRMM--GLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGF 409
H M+ G+ P C I + K+ +E A L+ M+ G
Sbjct: 336 HEMVSHGINIKPYMYDC--CICVMSKEGVMEKAKALFDGMIASGL 378
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 141/312 (45%), Gaps = 4/312 (1%)
Query: 143 VLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQ 201
+L TA + + F ++ + D F L+ C+ ++ A +V + K
Sbjct: 77 LLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLG 136
Query: 202 FRPNLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAY 258
+ P++ TF LL G+ DA M + G P+VV YN+L+D CK EL A
Sbjct: 137 YEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIAL 196
Query: 259 KVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNF 318
++L+EM ++ L DV+TY +++ GL G+ A +L++M + PDV + A I F
Sbjct: 197 ELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVF 256
Query: 319 CIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNT 378
L EA +L EM ++PN TYN L + + M GC PN
Sbjct: 257 VKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNV 316
Query: 379 QSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLE 438
+ LI F K V+ ++L+ M +GF + + L C +GKL A F
Sbjct: 317 VTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCW 376
Query: 439 MIEKGQKPSNVS 450
M+ + P ++
Sbjct: 377 MVSRRVTPDIIT 388
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 133/281 (47%), Gaps = 4/281 (1%)
Query: 175 FNALLRTLCQEKSMTDARN-VYHSLKHQFRPNLQTFNILLSGWKTPEDAEVFFKKMREM- 232
F +LL C + DA + V +K + PN+ +N L+ G + + + + EM
Sbjct: 144 FGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEME 203
Query: 233 --GVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
G+ DVVTYN+L+ C A ++L +M +R ++PDV+T+T++I G D
Sbjct: 204 KKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLD 263
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
+A+++ KEM + P+ YN+ I C+ RL +A D M SKG PN TYN
Sbjct: 264 EAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLI 323
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG 410
F + ++ RM G + + + LI + + K+ +AL ++ MV +
Sbjct: 324 SGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVT 383
Query: 411 SYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+ +L LC G++ A F +M E + V++
Sbjct: 384 PDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAY 424
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 127/266 (47%), Gaps = 4/266 (1%)
Query: 190 DARNVYHSLKH-QFRPNLQTFNILLSG---WKTPEDAEVFFKKMREMGVTPDVVTYNSLV 245
DA ++ + H Q P++ F LL+ + E F +KM G++ D+ ++ L+
Sbjct: 54 DAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILI 113
Query: 246 DVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCY 305
+C+ L A VL +M + P ++T+ S++ G LV + A ++ M + G
Sbjct: 114 HCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE 173
Query: 306 PDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNM 365
P+V YN I C L A +L++EM KGL + TYN +S + M
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM 233
Query: 366 YHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCD 425
MM +P+ + LI +F KQ ++ A +L+ +M++ + + + + LC
Sbjct: 234 LRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCM 293
Query: 426 MGKLGEAEKCFLEMIEKGQKPSNVSF 451
G+L +A+K F M KG P+ V++
Sbjct: 294 HGRLYDAKKTFDLMASKGCFPNVVTY 319
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 102/195 (52%), Gaps = 4/195 (2%)
Query: 158 EFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGW 216
E ++ + D + +N+++ LC + DA+ + + + PN+ T+N L+SG+
Sbjct: 267 ELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGF 326
Query: 217 ---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDV 273
+ ++ F++M G D+ TYN+L+ YC+ +L A + M R ++PD+
Sbjct: 327 CKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDI 386
Query: 274 ITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDE 333
IT+ ++ GL + G+ + A +M+E Y + AYN I C A ++ +A++L
Sbjct: 387 ITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCR 446
Query: 334 MTSKGLNPNATTYNL 348
+ +G+ P+A TY +
Sbjct: 447 LPVEGVKPDARTYTI 461
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 111/250 (44%), Gaps = 6/250 (2%)
Query: 164 KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTPE-- 220
+ + PD T F AL+ ++ ++ +A+ +Y + + PN T+N +++G
Sbjct: 240 RSINPDVVT--FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRL 297
Query: 221 -DAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
DA+ F M G P+VVTYN+L+ +CK R +++ K+ M + D+ TY ++
Sbjct: 298 YDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTL 357
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
I G VG+ A D+ M PD+ + + C+ + A D+M
Sbjct: 358 IHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEK 417
Query: 340 NPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQ 399
YN+ ++ ++ +W ++ R+ G P+ ++ +I K A +
Sbjct: 418 YIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADE 477
Query: 400 LWGDMVEKGF 409
L M E+G
Sbjct: 478 LIRRMKEEGI 487
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 101/222 (45%), Gaps = 2/222 (0%)
Query: 254 LEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNA 313
E A+ + EM P ++ +T ++ + + + ++M+ YG D+ ++
Sbjct: 52 FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTI 111
Query: 314 AIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLG 373
I FC RL A ++ +M G P+ T+ F N + ++++ M+ G
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171
Query: 374 CHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAE 433
PN LI K ++ +AL+L +M +KG G+ + + L LC G+ +A
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231
Query: 434 KCFLEMIEKGQKPSNVSFRR-IKVLMELANRHEALQNLTQKM 474
+ +M+++ P V+F I V ++ N EA Q L ++M
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEA-QELYKEM 272
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 177/401 (44%), Gaps = 34/401 (8%)
Query: 101 AFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMV-VLARTAKVCSVRQTVEF 159
A + +L LGR+ + + DL+++ D+ I P V + +L T +C R+ E
Sbjct: 294 APPFNALLSCLGRNMDISRMNDLVLKM---DEVKIRPDVVTLGILINT--LCKSRRVDEA 348
Query: 160 FRRFKKL---------VPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFR--PNLQT 208
F+K+ V D+ FN L+ LC+ + +A + +K + R PN T
Sbjct: 349 LEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVT 408
Query: 209 FNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMR 265
+N L+ G+ E A+ +M+E + P+VVT N++V C+ L A +M
Sbjct: 409 YNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDME 468
Query: 266 ERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLR 325
+ + +V+TY ++I V +KA ++M E GC PD Y A I C +R
Sbjct: 469 KEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDH 528
Query: 326 EAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLI 385
+A +V+++ G + + YN+ +F N+ + + M M G P++ + LI
Sbjct: 529 DAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLI 588
Query: 386 RLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEM-IEKGQ 444
F K + E ++ M E G + D C +G+L EA K F +M +
Sbjct: 589 SFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKV 648
Query: 445 KPSNVSFRRIKVLMELANRHEALQNLTQKMAVFGRPVQVRE 485
P+ V + L N K+ FG+ + ++E
Sbjct: 649 NPNTVIYN-------------ILINAFSKLGNFGQALSLKE 676
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 123/264 (46%), Gaps = 6/264 (2%)
Query: 139 TVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL 198
T M ++ V +V + + ++ + + D + AL+ LCQ + DA V L
Sbjct: 478 TYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKL 537
Query: 199 KHQ-FRPNLQTFNILLSGWKTPEDAEVFFKKMREM---GVTPDVVTYNSLVDVYCKGREL 254
K F +L +N+L+ + + E ++ + +M G PD +TYN+L+ + K ++
Sbjct: 538 KEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDF 597
Query: 255 EKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYG-CYPDVPAYNA 313
E +++++MRE L P V TY ++I VG+ D+A + K+M + P+ YN
Sbjct: 598 ESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNI 657
Query: 314 AIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLG 373
I F +A L +EM K + PN TYN F+ ++ + M+
Sbjct: 658 LINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQS 717
Query: 374 CHPNTQSCMFLI-RLFKKQEKVEM 396
C PN + L+ RL E V++
Sbjct: 718 CEPNQITMEILMERLSGSDELVKL 741
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 127/290 (43%), Gaps = 5/290 (1%)
Query: 139 TVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHS- 197
TV ++ + + V FF +K + + L+ C ++ A Y
Sbjct: 443 TVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKM 502
Query: 198 LKHQFRPNLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGREL 254
L+ P+ + + L+SG + DA +K++E G + D++ YN L+ ++C
Sbjct: 503 LEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNT 562
Query: 255 EKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAA 314
EK Y++L +M + PD ITY ++I G + ++++M+E G P V Y A
Sbjct: 563 EKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAV 622
Query: 315 IRNFCIAKRLREAYDLVDEMT-SKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLG 373
I +C L EA L +M +NPN YN+ F + + ++ M
Sbjct: 623 IDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKM 682
Query: 374 CHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLL 423
PN ++ L + ++ + E L+L +MVE+ + ++L + L
Sbjct: 683 VRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/367 (19%), Positives = 139/367 (37%), Gaps = 53/367 (14%)
Query: 153 VRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ---FRPNLQTF 209
V Q+V + R + + + N ++ L + + DA V + + F PN T
Sbjct: 168 VNQSVLVYERLDSNMKN--SQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITA 225
Query: 210 NILLSG-WK----TPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEM 264
+I+L WK T E + GV+P+ V + CK A+ +L ++
Sbjct: 226 DIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDL 285
Query: 265 RERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRL 324
+ + + +++ LG + D++ +M E PDV I C ++R+
Sbjct: 286 MKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRV 345
Query: 325 REAYDLVDEMTSK--------------------GL----------------------NPN 342
EA ++ ++M K GL PN
Sbjct: 346 DEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPN 405
Query: 343 ATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWG 402
A TYN + + L+++ + RM PN + ++ + + MA+ +
Sbjct: 406 AVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFM 465
Query: 403 DMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKP-SNVSFRRIKVLMELA 461
DM ++G + L C + + +A + +M+E G P + + + I L ++
Sbjct: 466 DMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVR 525
Query: 462 NRHEALQ 468
H+A++
Sbjct: 526 RDHDAIR 532
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 154/338 (45%), Gaps = 9/338 (2%)
Query: 148 AKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL--KHQFRPN 205
K+ V + F R +P + FN L+ + DA+ V + + P+
Sbjct: 333 CKIGRVDAAKDLFYR----IPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPD 388
Query: 206 LQTFNILLSG-WKTP--EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLD 262
+ T+N L+ G WK A MR G P+V +Y LVD +CK ++++AY VL+
Sbjct: 389 VCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLN 448
Query: 263 EMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAK 322
EM L P+ + + +I + +A ++ +EM GC PDV +N+ I C
Sbjct: 449 EMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVD 508
Query: 323 RLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCM 382
++ A L+ +M S+G+ N TYN F +++ + + + M+ G + +
Sbjct: 509 EIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYN 568
Query: 383 FLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEK 442
LI+ + +V+ A L+ M+ G + ++L + LC G + EA + EM+ +
Sbjct: 569 SLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLR 628
Query: 443 GQKPSNVSFRRIKVLMELANRHEALQNLTQKMAVFGRP 480
G P V+F + + A R E + +K+ G P
Sbjct: 629 GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIP 666
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 143/290 (49%), Gaps = 6/290 (2%)
Query: 166 LVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKTPEDAEV 224
+VPD T +N+L+ +E + A V H ++++ +PN+ ++ IL+ G+ +
Sbjct: 385 IVPDVCT--YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDE 442
Query: 225 FFKKMREM---GVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIG 281
+ + EM G+ P+ V +N L+ +CK + +A ++ EM + PDV T+ S+I
Sbjct: 443 AYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS 502
Query: 282 GLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNP 341
GL V + A +L++M G + YN I F ++EA LV+EM +G
Sbjct: 503 GLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPL 562
Query: 342 NATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLW 401
+ TYN + + ++ + +++ +M+ G P+ SC LI + VE A++
Sbjct: 563 DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQ 622
Query: 402 GDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+MV +G + + L + LC G++ + F ++ +G P V+F
Sbjct: 623 KEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTF 672
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 166/404 (41%), Gaps = 63/404 (15%)
Query: 80 NPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRT 139
N S ++E + +TG + G+ H+ ++ LG + F I LLI+ KD+ ++ +
Sbjct: 90 NVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQ--MKDEGIVFKES 147
Query: 140 VMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLK 199
+ + + R D+D F L M + RNVY S +
Sbjct: 148 LFISIMR----------------------DYDKAGFPGQTTRL-----MLEMRNVY-SCE 179
Query: 200 HQFRPNLQTFNILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYK 259
F+ IL+SG A VF+ M + P + T+ ++ +C E++ A
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYD-MLSRKIPPTLFTFGVVMKAFCAVNEIDSALS 238
Query: 260 VLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFC 319
+L +M + P+ + Y ++I L + ++A +L+EM GC PD +N I C
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298
Query: 320 IAKRLREAYDLVDEMTSKGLNPNATTY-----------------NLFFRI----FYWSND 358
R+ EA +V+ M +G P+ TY +LF+RI N
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNT 358
Query: 359 LQSSWNMYHRM-----------MGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEK 407
L + + R+ G P+ + LI + K+ V +AL++ DM K
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 408 GFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
G +L D C +GK+ EA EM G KP+ V F
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGF 462
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 121/243 (49%), Gaps = 4/243 (1%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTPEDAEVFFKKM 229
+T FN L+ C+E + +A ++ + + +P++ TFN L+SG ++ + +
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLL 517
Query: 230 REM---GVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
R+M GV + VTYN+L++ + + E+++A K+++EM + D ITY S+I GL
Sbjct: 518 RDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRA 577
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
G+ DKAR + ++M G P + N I C + + EA + EM +G P+ T+
Sbjct: 578 GEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTF 637
Query: 347 NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE 406
N + ++ M+ ++ G P+T + L+ K V A L + +E
Sbjct: 638 NSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIE 697
Query: 407 KGF 409
GF
Sbjct: 698 DGF 700
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 128/279 (45%), Gaps = 6/279 (2%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGW----KTPEDAEVFFKKM 229
+ L+ C+ + +A NV + + +PN FN L+S + + PE E+F ++M
Sbjct: 427 YTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF-REM 485
Query: 230 REMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQP 289
G PDV T+NSL+ C+ E++ A +L +M + + +TY ++I G+
Sbjct: 486 PRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEI 545
Query: 290 DKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLF 349
+AR ++ EM G D YN+ I+ C A + +A L ++M G P+ + N+
Sbjct: 546 KEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNIL 605
Query: 350 FRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGF 409
S ++ + M+ G P+ + LI + ++E L ++ + +G
Sbjct: 606 INGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI 665
Query: 410 GSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSN 448
T+ + L LC G + +A E IE G P++
Sbjct: 666 PPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNH 704
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 89/185 (48%), Gaps = 4/185 (2%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRP-NLQTFNILLSGW---KTPEDAEVFF 226
+T +N L+ + + +AR + + + Q P + T+N L+ G + A F
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
+KM G P ++ N L++ C+ +E+A + EM R +PD++T+ S+I GL
Sbjct: 588 EKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 647
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
G+ + + ++++ G PD +N + C + +A L+DE G PN T+
Sbjct: 648 GRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTW 707
Query: 347 NLFFR 351
++ +
Sbjct: 708 SILLQ 712
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 128/257 (49%), Gaps = 3/257 (1%)
Query: 198 LKHQFRPNLQTFNILLSGW-KTPE--DAEVFFKKMREMGVTPDVVTYNSLVDVYCKGREL 254
LK F N+ NILL G + E A ++MR + PDV +YN+++ +C+G+EL
Sbjct: 134 LKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKEL 193
Query: 255 EKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAA 314
EKA ++ +EM+ S ++T+ +I G+ D+A LKEMK G D+ Y +
Sbjct: 194 EKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSL 253
Query: 315 IRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGC 374
IR FC L L DE+ +G +P A TYN R F L+ + ++ M+ G
Sbjct: 254 IRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGV 313
Query: 375 HPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEK 434
PN + LI K + ALQL M+EK + +++ + LC G + +A +
Sbjct: 314 RPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVE 373
Query: 435 CFLEMIEKGQKPSNVSF 451
M ++ +P N+++
Sbjct: 374 IVELMKKRRTRPDNITY 390
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 134/299 (44%), Gaps = 11/299 (3%)
Query: 163 FKKLVPDFDTNC---FNALLRTLCQEKSMTDARNVYH-SLKHQFRPNLQTFNILLSGW-- 216
F +++ D+ C +N L+R C+ + +A ++ ++ RPN+ T+ L+ G
Sbjct: 270 FDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCG 329
Query: 217 --KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVI 274
KT E A M E P+ VTYN +++ CK + A ++++ M++R PD I
Sbjct: 330 VGKTKE-ALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNI 388
Query: 275 TYTSIIGGLGLVGQPDKARDVLKEMKEYGCY--PDVPAYNAAIRNFCIAKRLREAYDLVD 332
TY ++GGL G D+A +L M + Y PDV +YNA I C RL +A D+ D
Sbjct: 389 TYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYD 448
Query: 333 EMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQE 392
+ K + T N+ + D+ + ++ ++ N+ + +I F K
Sbjct: 449 LLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTG 508
Query: 393 KVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+ +A L M + L LC G L +A + F EM P VSF
Sbjct: 509 MLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSF 567
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 146/317 (46%), Gaps = 8/317 (2%)
Query: 161 RRFKKLVPDFDTNCFNALLRTLCQEKS--MTDARNVYHSLKHQFRPNLQTFNILLSGWKT 218
R + KLV F LR+LC++ + + +A +V+ N L++
Sbjct: 27 RVYSKLVNAFSET--ETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLAFAGNNLMAKLVR 84
Query: 219 PEDAEV---FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVIT 275
+ E+ F++KM E + V+ + L++ Y + R+ A+ VL M +R + +V
Sbjct: 85 SRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYN 144
Query: 276 YTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMT 335
+ ++ GL + KA +L+EM+ PDV +YN IR FC K L +A +L +EM
Sbjct: 145 HNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMK 204
Query: 336 SKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVE 395
G + + T+ + F + + + M +G + LIR F +++
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264
Query: 396 MALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRR-I 454
L+ +++E+G + + L C +G+L EA + F MIE+G +P+ ++ I
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLI 324
Query: 455 KVLMELANRHEALQNLT 471
L + EALQ L
Sbjct: 325 DGLCGVGKTKEALQLLN 341
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 107/226 (47%)
Query: 229 MREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQ 288
M + G +V +N L+ C+ E KA +L EMR L PDV +Y ++I G +
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192
Query: 289 PDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNL 348
+KA ++ EMK GC + + I FC A ++ EA + EM GL + Y
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Query: 349 FFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKG 408
R F +L ++ ++ G P + LIR F K +++ A +++ M+E+G
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312
Query: 409 FGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
L D LC +GK EA + MIEK ++P+ V++ I
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNII 358
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 122/261 (46%), Gaps = 6/261 (2%)
Query: 178 LLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGW---KTPEDAEVFFKKMREMG 233
L+ C+ M +A +K +L + L+ G+ + + F ++ E G
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 234 VTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKAR 293
+P +TYN+L+ +CK +L++A ++ + M ER + P+V TYT +I GL VG+ +A
Sbjct: 278 DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337
Query: 294 DVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIF 353
+L M E P+ YN I C + +A ++V+ M + P+ TYN+
Sbjct: 338 QLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL 397
Query: 354 YWSNDLQSSWNMYHRMMGLGCH--PNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGS 411
DL + + + M+ + P+ S LI K+ ++ AL ++ +VEK
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG 457
Query: 412 YTLVSDVLFDLLCDMGKLGEA 432
+ +++L + G + +A
Sbjct: 458 DRVTTNILLNSTLKAGDVNKA 478
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 122/261 (46%), Gaps = 4/261 (1%)
Query: 169 DFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQ-TFNILLSGWKTPED---AEV 224
D D +NAL+ LC+E + A ++Y L + + T NILL+ D A
Sbjct: 421 DPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAME 480
Query: 225 FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLG 284
+K++ + + + TY +++D +CK L A +L +MR +L P V Y ++ L
Sbjct: 481 LWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLC 540
Query: 285 LVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNAT 344
G D+A + +EM+ +PDV ++N I A ++ A L+ M+ GL+P+
Sbjct: 541 KEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLF 600
Query: 345 TYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDM 404
TY+ F L + + + +M+ G P+ C +++ Q + + +L +
Sbjct: 601 TYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKL 660
Query: 405 VEKGFGSYTLVSDVLFDLLCD 425
V+K ++ + D +C+
Sbjct: 661 VDKDIVLDKELTCTVMDYMCN 681
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 132/306 (43%), Gaps = 9/306 (2%)
Query: 150 VCSVRQTVEFFRRFKKLVP-DFDTNC--FNALLRTLCQEKSMTDARNVYHSLK-HQFRPN 205
+C V +T E + ++ D + N +N ++ LC++ + DA + +K + RP+
Sbjct: 327 LCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPD 386
Query: 206 LQTFNILLSGWKTPED----AEVFFKKMREMGVT-PDVVTYNSLVDVYCKGRELEKAYKV 260
T+NILL G D +++ + +++ T PDV++YN+L+ CK L +A +
Sbjct: 387 NITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDI 446
Query: 261 LDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCI 320
D + E+ + D +T ++ G +KA ++ K++ + + Y A I FC
Sbjct: 447 YDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCK 506
Query: 321 AKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQS 380
L A L+ +M L P+ YN L +W ++ M P+ S
Sbjct: 507 TGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVS 566
Query: 381 CMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMI 440
+I K ++ A L M G L + +G L EA F +M+
Sbjct: 567 FNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMV 626
Query: 441 EKGQKP 446
+ G +P
Sbjct: 627 DSGFEP 632
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 173/384 (45%), Gaps = 22/384 (5%)
Query: 101 AFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMV-VLARTAKVCSVRQTVEF 159
A + +L LGR+ + + DL+++ D+ I P V + +L T +C R+ E
Sbjct: 294 APPFNALLSCLGRNMDISRMNDLVLKM---DEVKIRPDVVTLGILINT--LCKSRRVDEA 348
Query: 160 FRRFKKL---------VPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFR--PNLQT 208
F+++ V D+ FN L+ LC+ + +A + +K + R PN T
Sbjct: 349 LEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVT 408
Query: 209 FNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMR 265
+N L+ G+ E A+ +M+E + P+VVT N++V C+ L A +M
Sbjct: 409 YNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDME 468
Query: 266 ERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLR 325
+ + +V+TY ++I V +KA ++M E GC PD Y A I C +R
Sbjct: 469 KEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDH 528
Query: 326 EAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLI 385
+A +V+++ G + + YN+ +F N+ + + M M G P++ + LI
Sbjct: 529 DAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLI 588
Query: 386 RLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEM-IEKGQ 444
F K + E ++ M E G + D C +G+L EA K F +M +
Sbjct: 589 SFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKV 648
Query: 445 KPSNVSFR-RIKVLMELANRHEAL 467
P+ V + I +L N +AL
Sbjct: 649 NPNTVIYNILINAFSKLGNFGQAL 672
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 124/264 (46%), Gaps = 6/264 (2%)
Query: 139 TVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL 198
T M ++ V +V + + ++ + + D + AL+ LCQ + DA V L
Sbjct: 478 TYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKL 537
Query: 199 KHQ-FRPNLQTFNILLSGWKTPEDAEVFFKKMREM---GVTPDVVTYNSLVDVYCKGREL 254
K F +L +N+L+ + +AE ++ + +M G PD +TYN+L+ + K ++
Sbjct: 538 KEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDF 597
Query: 255 EKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYG-CYPDVPAYNA 313
E +++++MRE L P V TY ++I VG+ D+A + K+M + P+ YN
Sbjct: 598 ESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNI 657
Query: 314 AIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLG 373
I F +A L +EM K + PN TYN F+ ++ + M+
Sbjct: 658 LINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQS 717
Query: 374 CHPNTQSCMFLI-RLFKKQEKVEM 396
C PN + L+ RL E V++
Sbjct: 718 CEPNQITMEILMERLSGSDELVKL 741
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/431 (23%), Positives = 183/431 (42%), Gaps = 73/431 (16%)
Query: 94 RKGFFHTAFS-LDTMLYILGRSRMF--NHI-WDLLIEARWKDQTLITPRTVMVVLARTAK 149
R G AF LD ML + +F N I D+++ WK++ L+T ++ +++R +
Sbjct: 197 RNGLVDDAFKVLDEMLQ---KESVFPPNRITADIVLHEVWKER-LLTEEKIIALISRFSS 252
Query: 150 VCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRP-NLQT 208
+V + RF + +LC+ A ++ L P
Sbjct: 253 HGVSPNSV-WLTRF---------------ISSLCKNARANTAWDILSDLMKNKTPLEAPP 296
Query: 209 FNILLSGWKTPEDAEV---FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMR 265
FN LLS D KM E+ + PDVVT L++ CK R +++A +V ++MR
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 266 ERD------LSPDVITYTSIIGGLGLVGQPDKARDVLKEMK-EYGCYPDVPAYNAAIRNF 318
+ + D I + ++I GL VG+ +A ++L MK E C P+ YN I +
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGY 416
Query: 319 CIAKRLREAYDLVDEMTSKGLNPNATTYN----------------LFFR----------- 351
C A +L A ++V M + PN T N +FF
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV 476
Query: 352 IFYWS--------NDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGD 403
+ Y + ++++ + Y +M+ GC P+ + LI + + A+++
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 404 MVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANR 463
+ E GF L ++L L CD + + +M ++G+KP ++++ L+ +
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITY---NTLISFFGK 593
Query: 464 HEALQNLTQKM 474
H+ +++ + M
Sbjct: 594 HKDFESVERMM 604
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 127/290 (43%), Gaps = 5/290 (1%)
Query: 139 TVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHS- 197
TV ++ + + V FF +K + + L+ C ++ A Y
Sbjct: 443 TVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKM 502
Query: 198 LKHQFRPNLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGREL 254
L+ P+ + + L+SG + DA +K++E G + D++ YN L+ ++C
Sbjct: 503 LEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNA 562
Query: 255 EKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAA 314
EK Y++L +M + PD ITY ++I G + ++++M+E G P V Y A
Sbjct: 563 EKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAV 622
Query: 315 IRNFCIAKRLREAYDLVDEMT-SKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLG 373
I +C L EA L +M +NPN YN+ F + + ++ M
Sbjct: 623 IDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKM 682
Query: 374 CHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLL 423
PN ++ L + ++ + E L+L +MVE+ + ++L + L
Sbjct: 683 VRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/367 (18%), Positives = 138/367 (37%), Gaps = 53/367 (14%)
Query: 153 VRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ---FRPNLQTF 209
V Q+V + R + + + N ++ L + + DA V + + F PN T
Sbjct: 168 VNQSVLVYERLDSNMKN--SQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITA 225
Query: 210 NILLSG-WK----TPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEM 264
+I+L WK T E + GV+P+ V + CK A+ +L ++
Sbjct: 226 DIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDL 285
Query: 265 RERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRL 324
+ + + +++ LG + D++ +M E PDV I C ++R+
Sbjct: 286 MKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRV 345
Query: 325 REAYDLVDEMTSKGLN------------------------------------------PN 342
EA ++ ++M K + PN
Sbjct: 346 DEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPN 405
Query: 343 ATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWG 402
A TYN + + L+++ + RM PN + ++ + + MA+ +
Sbjct: 406 AVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFM 465
Query: 403 DMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKP-SNVSFRRIKVLMELA 461
DM ++G + L C + + +A + +M+E G P + + + I L ++
Sbjct: 466 DMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVR 525
Query: 462 NRHEALQ 468
H+A++
Sbjct: 526 RDHDAIR 532
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 177/401 (44%), Gaps = 34/401 (8%)
Query: 101 AFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMV-VLARTAKVCSVRQTVEF 159
A + +L LGR+ + + DL+++ D+ I P V + +L T +C R+ E
Sbjct: 294 APPFNALLSCLGRNMDISRMNDLVLKM---DEVKIRPDVVTLGILINT--LCKSRRVDEA 348
Query: 160 FRRFKKL---------VPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFR--PNLQT 208
F+++ V D+ FN L+ LC+ + +A + +K + R PN T
Sbjct: 349 LEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVT 408
Query: 209 FNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMR 265
+N L+ G+ E A+ +M+E + P+VVT N++V C+ L A +M
Sbjct: 409 YNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDME 468
Query: 266 ERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLR 325
+ + +V+TY ++I V +KA ++M E GC PD Y A I C +R
Sbjct: 469 KEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDH 528
Query: 326 EAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLI 385
+A +V+++ G + + YN+ +F N+ + + M M G P++ + LI
Sbjct: 529 DAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLI 588
Query: 386 RLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEM-IEKGQ 444
F K + E ++ M E G + D C +G+L EA K F +M +
Sbjct: 589 SFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKV 648
Query: 445 KPSNVSFRRIKVLMELANRHEALQNLTQKMAVFGRPVQVRE 485
P+ V + L N K+ FG+ + ++E
Sbjct: 649 NPNTVIYN-------------ILINAFSKLGNFGQALSLKE 676
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 5/218 (2%)
Query: 139 TVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL 198
T M ++ V +V + + ++ + + D + AL+ LCQ + DA V L
Sbjct: 478 TYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKL 537
Query: 199 KHQ-FRPNLQTFNILLSGWKTPEDAEVFFKKMREM---GVTPDVVTYNSLVDVYCKGREL 254
K F +L +N+L+ + +AE ++ + +M G PD +TYN+L+ + K ++
Sbjct: 538 KEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDF 597
Query: 255 EKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYG-CYPDVPAYNA 313
E +++++MRE L P V TY ++I VG+ D+A + K+M + P+ YN
Sbjct: 598 ESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNI 657
Query: 314 AIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFR 351
I F +A L +EM K + PN TYN F+
Sbjct: 658 LINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFK 695
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 120/273 (43%), Gaps = 5/273 (1%)
Query: 139 TVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHS- 197
TV ++ + + V FF +K + + L+ C ++ A Y
Sbjct: 443 TVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKM 502
Query: 198 LKHQFRPNLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGREL 254
L+ P+ + + L+SG + DA +K++E G + D++ YN L+ ++C
Sbjct: 503 LEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNA 562
Query: 255 EKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAA 314
EK Y++L +M + PD ITY ++I G + ++++M+E G P V Y A
Sbjct: 563 EKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAV 622
Query: 315 IRNFCIAKRLREAYDLVDEMT-SKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLG 373
I +C L EA L +M +NPN YN+ F + + ++ M
Sbjct: 623 IDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKM 682
Query: 374 CHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE 406
PN ++ L + ++ + E L+L +MVE
Sbjct: 683 VRPNVETYNALFKCLNEKTQGETLLKLMDEMVE 715
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/367 (18%), Positives = 138/367 (37%), Gaps = 53/367 (14%)
Query: 153 VRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ---FRPNLQTF 209
V Q+V + R + + + N ++ L + + DA V + + F PN T
Sbjct: 168 VNQSVLVYERLDSNMKN--SQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITA 225
Query: 210 NILLSG-WK----TPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEM 264
+I+L WK T E + GV+P+ V + CK A+ +L ++
Sbjct: 226 DIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDL 285
Query: 265 RERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRL 324
+ + + +++ LG + D++ +M E PDV I C ++R+
Sbjct: 286 MKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRV 345
Query: 325 REAYDLVDEMTSKGLN------------------------------------------PN 342
EA ++ ++M K + PN
Sbjct: 346 DEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPN 405
Query: 343 ATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWG 402
A TYN + + L+++ + RM PN + ++ + + MA+ +
Sbjct: 406 AVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFM 465
Query: 403 DMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKP-SNVSFRRIKVLMELA 461
DM ++G + L C + + +A + +M+E G P + + + I L ++
Sbjct: 466 DMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVR 525
Query: 462 NRHEALQ 468
H+A++
Sbjct: 526 RDHDAIR 532
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 143/317 (45%), Gaps = 6/317 (1%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSLK-HQFRPNLQTFNILLSGWKTP----EDAEVF 225
D N + + + R ++ +K +F P+ ++++IL+ G E E+F
Sbjct: 516 DLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELF 575
Query: 226 FKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGL 285
+ M+E G D YN ++D +CK ++ KAY++L+EM+ + P V+TY S+I GL
Sbjct: 576 YS-MKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK 634
Query: 286 VGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATT 345
+ + D+A + +E K +V Y++ I F R+ EAY +++E+ KGL PN T
Sbjct: 635 IDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYT 694
Query: 346 YNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMV 405
+N + ++ + + M L C PN + LI K K A W +M
Sbjct: 695 WNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQ 754
Query: 406 EKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHE 465
++G T+ + L G + EA F G P + + + + NR
Sbjct: 755 KQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAM 814
Query: 466 ALQNLTQKMAVFGRPVQ 482
+L ++ G P+
Sbjct: 815 DAFSLFEETRRRGLPIH 831
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 138/283 (48%), Gaps = 3/283 (1%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKTPEDAEVFFK---KMRE 231
+N +L L + + +A V+ +K PNL T+NIL+ + F+ M++
Sbjct: 346 YNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQK 405
Query: 232 MGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDK 291
G+ P+V T N +VD CK ++L++A + +EM + +PD IT+ S+I GLG VG+ D
Sbjct: 406 AGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDD 465
Query: 292 ARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFR 351
A V ++M + C + Y + I+NF R + + + +M ++ +P+ N +
Sbjct: 466 AYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMD 525
Query: 352 IFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGS 411
+ + + + M+ + P+ +S LI K +L+ M E+G
Sbjct: 526 CMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVL 585
Query: 412 YTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
T +++ D C GK+ +A + EM KG +P+ V++ +
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 93/416 (22%), Positives = 174/416 (41%), Gaps = 49/416 (11%)
Query: 65 ELIDQVLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLL 124
E + VL+R++ + ++ +E++R+ RR H S +++L ++ R R F+ + +L
Sbjct: 66 EFVIGVLRRLK----DVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQIL 121
Query: 125 IEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQ 184
E M V V + + V + KL +D
Sbjct: 122 GE--------------MSVAGFGPSVNTCIEMVLGCVKANKLREGYDV------------ 155
Query: 185 EKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKTPEDAEV---FFKKMREMGVTPDVVTY 241
V K +FRP + L+ + +++ F++M+E+G P V +
Sbjct: 156 ---------VQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLF 206
Query: 242 NSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKE 301
+L+ + K ++ A +LDEM+ L D++ Y I G VG+ D A E++
Sbjct: 207 TTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEA 266
Query: 302 YGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQS 361
G PD Y + I C A RL EA ++ + + P YN + +
Sbjct: 267 NGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDE 326
Query: 362 SWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFD 421
++++ R G P+ + ++ +K KV+ AL+++ +M +K ++L D
Sbjct: 327 AYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILID 385
Query: 422 LLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEALQNLTQKMAVF 477
+LC GKL A E+ + QK F ++ + + +R Q L + A+F
Sbjct: 386 MLCRAGKLDTA----FELRDSMQKAG--LFPNVRTVNIMVDRLCKSQKLDEACAMF 435
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 169/427 (39%), Gaps = 82/427 (19%)
Query: 102 FSLDTMLYILGRSRMFNHIWDLLIEARWKDQ--TLITPRTVMVVLARTAKVCSVRQTVEF 159
++ +TM+ G + F+ + LL R K ++I ++ L + KV + ++
Sbjct: 309 YAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKV---DEALKV 365
Query: 160 FRRFKK-LVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNIL---LS 214
F KK P+ T +N L+ LC+ + A + S+ K PN++T NI+ L
Sbjct: 366 FEEMKKDAAPNLST--YNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLC 423
Query: 215 GWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVI 274
+ ++A F++M TPD +T+ SL+D K ++ AYKV ++M + D + I
Sbjct: 424 KSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSI 483
Query: 275 TYTSIIGG-----------------------------------LGLVGQPDKARDVLKE- 298
YTS+I + G+P+K R + +E
Sbjct: 484 VYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEI 543
Query: 299 ----------------------------------MKEYGCYPDVPAYNAAIRNFCIAKRL 324
MKE GC D AYN I FC ++
Sbjct: 544 KARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKV 603
Query: 325 REAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFL 384
+AY L++EM +KG P TY + L ++ ++ N L
Sbjct: 604 NKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSL 663
Query: 385 IRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQ 444
I F K +++ A + ++++KG + L D L ++ EA CF M E
Sbjct: 664 IDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKC 723
Query: 445 KPSNVSF 451
P+ V++
Sbjct: 724 TPNQVTY 730
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 130/290 (44%), Gaps = 4/290 (1%)
Query: 138 RTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHS 197
R+ +++ K +T E F K+ DT +N ++ C+ + A +
Sbjct: 553 RSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEE 612
Query: 198 LKHQ-FRPNLQTFNILLSGWKTPE---DAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRE 253
+K + F P + T+ ++ G + +A + F++ + + +VV Y+SL+D + K
Sbjct: 613 MKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGR 672
Query: 254 LEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNA 313
+++AY +L+E+ ++ L+P++ T+ S++ L + ++A + MKE C P+ Y
Sbjct: 673 IDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGI 732
Query: 314 AIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLG 373
I C ++ +A+ EM +G+ P+ +Y + ++ + ++ R G
Sbjct: 733 LINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANG 792
Query: 374 CHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLL 423
P++ +I + A L+ + +G + VL D L
Sbjct: 793 GVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTL 842
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 144/337 (42%), Gaps = 6/337 (1%)
Query: 76 FSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLI 135
F P + + R+ F A S +++ L ++ N ++L + + L
Sbjct: 528 FKAGEPEKGRAMFEEIKARR-FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLD 586
Query: 136 TPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVY 195
T R +V+ K V + + K + + +++ L + + +A ++
Sbjct: 587 T-RAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF 645
Query: 196 HSLKHQ-FRPNLQTFNILLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKG 251
K + N+ ++ L+ G+ ++A + +++ + G+TP++ T+NSL+D K
Sbjct: 646 EEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKA 705
Query: 252 RELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAY 311
E+ +A M+E +P+ +TY +I GL V + +KA +EM++ G P +Y
Sbjct: 706 EEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISY 765
Query: 312 NAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMG 371
I A + EA L D + G P++ YN N +++++
Sbjct: 766 TTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRR 825
Query: 372 LGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKG 408
G + ++C+ L+ K + +E A + + E G
Sbjct: 826 RGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 134/263 (50%), Gaps = 8/263 (3%)
Query: 146 RTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRP 204
R + R +E + + + PD +N L+R C+ M +A + +K + P
Sbjct: 401 RKGDLVGARMKIEAMEK-QGMKPDHLA--YNCLIRRFCELGEMENAEKEVNKMKLKGVSP 457
Query: 205 NLQTFNILLSGWKTPEDAEVFFKKMREM---GVTPDVVTYNSLVDVYCKGRELEKAYKVL 261
+++T+NIL+ G+ + + F ++EM G P+VV+Y +L++ CKG +L +A V
Sbjct: 458 SVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVK 517
Query: 262 DEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIA 321
+M +R +SP V Y +I G G+ + A KEM + G ++ YN I +
Sbjct: 518 RDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMT 577
Query: 322 KRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSC 381
+L EA DL+ E++ KGL P+ TYN + ++ ++Q +Y M G P ++
Sbjct: 578 GKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTY 637
Query: 382 MFLIRLFKKQEKVEMALQLWGDM 404
LI L K E +E+ +L+G+M
Sbjct: 638 HLLISLCTK-EGIELTERLFGEM 659
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 156/342 (45%), Gaps = 10/342 (2%)
Query: 140 VMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVY-HSL 198
++ VL +K+ S + F R + + P D+ LL L + K NV+ + L
Sbjct: 114 LLSVLLNESKMISEAADLFFALRNEGIYPSSDS--LTLLLDHLVKTKQFRVTINVFLNIL 171
Query: 199 KHQFRPNLQTFNILLSGWKTPEDAEV---FFKKMREMGVTPDVVTYNSLVDVYCKGRELE 255
+ FRP+ + + D F +M+ + P V YN L+D CKG+ +
Sbjct: 172 ESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMN 231
Query: 256 KAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAI 315
A ++ DEM R L P +ITY ++I G G P+K+ V + MK P + +N +
Sbjct: 232 DAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLL 291
Query: 316 RNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCH 375
+ A + +A +++ EM G P+A T+++ F + + +++ +Y + G
Sbjct: 292 KGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVK 351
Query: 376 PNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKC 435
N +C L+ K+ K+E A ++ G + KG ++ + + D C G L A
Sbjct: 352 MNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMK 411
Query: 436 FLEMIEKGQKPSNVSF----RRIKVLMELANRHEALQNLTQK 473
M ++G KP ++++ RR L E+ N + + + K
Sbjct: 412 IEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLK 453
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 133/319 (41%), Gaps = 39/319 (12%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKH-QFRPNLQTFNILLSGWKTPEDAEVFFK------ 227
FN LL+ L + + DA NV +K F P+ TF+IL G+ + E AE
Sbjct: 287 FNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAV 346
Query: 228 ----KM--------------------------REM--GVTPDVVTYNSLVDVYCKGRELE 255
KM REM G+ P+ V YN+++D YC+ +L
Sbjct: 347 DSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLV 406
Query: 256 KAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAI 315
A ++ M ++ + PD + Y +I +G+ + A + +MK G P V YN I
Sbjct: 407 GARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILI 466
Query: 316 RNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCH 375
+ + +D++ EM G PN +Y + L + + M G
Sbjct: 467 GGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVS 526
Query: 376 PNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKC 435
P + LI + K+E A + +M++KG + + L D L GKL EAE
Sbjct: 527 PKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDL 586
Query: 436 FLEMIEKGQKPSNVSFRRI 454
LE+ KG KP ++ +
Sbjct: 587 LLEISRKGLKPDVFTYNSL 605
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 110/230 (47%), Gaps = 11/230 (4%)
Query: 151 CSVRQTVEFFRRFKKLVP---DFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNL 206
CS + + FR K+++ + + +N L+ L +++A ++ + + +P++
Sbjct: 540 CSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDV 599
Query: 207 QTFNILLSGWKTPEDAE---VFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDE 263
T+N L+SG+ + + +++M+ G+ P + TY+ L+ + C +E ++ E
Sbjct: 600 FTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISL-CTKEGIELTERLFGE 658
Query: 264 MRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKR 323
M L PD++ Y ++ + G +KA ++ K+M E D YN+ I +
Sbjct: 659 M---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGK 715
Query: 324 LREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLG 373
L E L+DEM ++ + P A TYN+ + D S++ Y M G
Sbjct: 716 LCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKG 765
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 5/207 (2%)
Query: 133 TLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDAR 192
L+T T++ L+ T K+ + R K L PD T +N+L+ ++
Sbjct: 563 NLVTYNTLIDGLSMTGKLSEAEDLLLEISR-KGLKPDVFT--YNSLISGYGFAGNVQRCI 619
Query: 193 NVYHSLKHQ-FRPNLQTFNILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKG 251
+Y +K +P L+T+++L+S T E E+ + EM + PD++ YN ++ Y
Sbjct: 620 ALYEEMKRSGIKPTLKTYHLLIS-LCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVH 678
Query: 252 RELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAY 311
++EKA+ + +M E+ + D TY S+I G VG+ + R ++ EM P+ Y
Sbjct: 679 GDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTY 738
Query: 312 NAAIRNFCIAKRLREAYDLVDEMTSKG 338
N ++ C K AY EM KG
Sbjct: 739 NIIVKGHCEVKDYMSAYVWYREMQEKG 765
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 166/369 (44%), Gaps = 44/369 (11%)
Query: 139 TVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL 198
T ++L + V + + +FR+ L + F +L+ LC++ S+ A + +
Sbjct: 254 TCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEM 313
Query: 199 -KHQFRPNLQTFNILLSG-----WKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGR 252
++ ++PN+ T L+ G W T + +F K +R P+V TY S++ YCK
Sbjct: 314 VRNGWKPNVYTHTALIDGLCKRGW-TEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKED 372
Query: 253 ELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYN 312
+L +A + M+E+ L P+V TYT++I G G +A +++ M + G P++ YN
Sbjct: 373 KLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYN 432
Query: 313 AAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRM--- 369
AAI + C R EAY+L+++ S GL + TY + + ND+ + + RM
Sbjct: 433 AAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKT 492
Query: 370 --------------------------------MGLGCHPNTQSCMFLIRLFKKQEKVEMA 397
+ LG P ++ +I + K+ +++A
Sbjct: 493 GFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLA 552
Query: 398 LQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVL 457
L+ + +M G + L LC + EA K + MI++G P V+ R+ +
Sbjct: 553 LKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVT--RVTLA 610
Query: 458 MELANRHEA 466
E R+++
Sbjct: 611 YEYCKRNDS 619
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 150/368 (40%), Gaps = 44/368 (11%)
Query: 150 VCSVRQTVEFFRRFKKLV------PDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-F 202
+C T + FR F KLV P+ T + +++ C+E + A ++ +K Q
Sbjct: 332 LCKRGWTEKAFRLFLKLVRSDTYKPNVHT--YTSMIGGYCKEDKLNRAEMLFSRMKEQGL 389
Query: 203 RPNLQTFNILLSGWKTPED---AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYK 259
PN+ T+ L++G A M + G P++ TYN+ +D CK +AY+
Sbjct: 390 FPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYE 449
Query: 260 VLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFC 319
+L++ L D +TYT +I ++A M + G D+ N I FC
Sbjct: 450 LLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFC 509
Query: 320 IAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQ 379
K+++E+ L + S GL P TY + D+ + +H M GC P++
Sbjct: 510 RQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSF 569
Query: 380 SCMFLIRLFKKQEKVEMALQLWGDMVEKGFG-----------SYTLVSD----------- 417
+ LI K+ V+ A +L+ M+++G Y +D
Sbjct: 570 TYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPL 629
Query: 418 ----------VLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEAL 467
L LC K+G A F +++EK V+ + ++ +
Sbjct: 630 DKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGKNNLV 689
Query: 468 QNLTQKMA 475
+LT++++
Sbjct: 690 TDLTERIS 697
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 122/276 (44%), Gaps = 5/276 (1%)
Query: 177 ALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLS---GWKTPEDAEVFFKKMREM 232
+LR + + +A + +++Q P+ T N +L E AE F +M
Sbjct: 152 CMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVR 211
Query: 233 GVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKA 292
GV PD +Y +V + ++++A + L M +R PD T T I+ L G ++A
Sbjct: 212 GVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRA 271
Query: 293 RDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRI 352
++M + G P++ + + I C +++A+++++EM G PN T+
Sbjct: 272 IWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDG 331
Query: 353 FYWSNDLQSSWNMYHRMMGLGCH-PNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGS 411
+ ++ ++ +++ + PN + +I + K++K+ A L+ M E+G
Sbjct: 332 LCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFP 391
Query: 412 YTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPS 447
L + C G G A + M ++G P+
Sbjct: 392 NVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPN 427
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 86/199 (43%), Gaps = 1/199 (0%)
Query: 251 GRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPA 310
GR L +A ++ +M+ + L+P IT ++ +G + A +V EM G PD +
Sbjct: 161 GR-LNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSS 219
Query: 311 YNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMM 370
Y + +++EA + M +G P+ T L + + + + +M+
Sbjct: 220 YKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMI 279
Query: 371 GLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLG 430
LG PN + LI K+ ++ A ++ +MV G+ L D LC G
Sbjct: 280 DLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTE 339
Query: 431 EAEKCFLEMIEKGQKPSNV 449
+A + FL+++ NV
Sbjct: 340 KAFRLFLKLVRSDTYKPNV 358
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 68/137 (49%)
Query: 315 IRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGC 374
+RNF RL EA +V +M ++GL P++ T N I ++ + N++ M G
Sbjct: 154 LRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGV 213
Query: 375 HPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEK 434
P++ S ++ + K++ A + M+++GF ++ LC+ G + A
Sbjct: 214 VPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIW 273
Query: 435 CFLEMIEKGQKPSNVSF 451
F +MI+ G KP+ ++F
Sbjct: 274 YFRKMIDLGFKPNLINF 290
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 154/330 (46%), Gaps = 10/330 (3%)
Query: 176 NALLRTLC-QEKSMTDARNVYHSLK-HQFRPNLQTFNILLSGWKTPEDAEVFFKKMREMG 233
N L+ LC +EK R V + H F P++ T++ L+ + D + MREMG
Sbjct: 384 NISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMG 443
Query: 234 ---VTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
+ + +T N+++D CK R+L++A+ +L+ +R D +TY ++I G + +
Sbjct: 444 QKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVE 503
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
KA ++ EMK+ P V +N+ I C + A + DE+ GL P+ +T+N
Sbjct: 504 KALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSII 563
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG 410
+ ++ ++ Y+ + P+ +C L+ K+ E AL + ++E+
Sbjct: 564 LGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV 623
Query: 411 SYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRR-IKVLME---LANRHEA 466
T+ + + C KL EA EM EKG +P ++ I +LME L+ E
Sbjct: 624 D-TVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDEL 682
Query: 467 LQNLTQKMAVFGRPVQVRESRPVQVHESRE 496
L+ + K R +QV + ES+E
Sbjct: 683 LKKFSGKFGSMKRDLQVETEKNPATSESKE 712
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 155/328 (47%), Gaps = 9/328 (2%)
Query: 112 GRSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFD 171
G+ + I+ +I + K L+T T+++ L R S+ E F K+ +
Sbjct: 145 GKPHVALQIFQKMIRLKLK-PNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLN 203
Query: 172 TNCFNALLRTLCQEKSMTDARNVYHSLKHQFR--PNLQTFNILLSGWKTP---EDAEVFF 226
FN L+ C E + DA + + +F+ P+ T+N +L D +
Sbjct: 204 VQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELL 263
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
M++ G+ P+ VTYN+LV YCK L++A+++++ M++ ++ PD+ TY +I GL
Sbjct: 264 LDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNA 323
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLR-EAYDLVDEMTSKGLNPNATT 345
G + +++ MK PDV YN I + C L EA L+++M + G+ N T
Sbjct: 324 GSMREGLELMDAMKSLKLQPDVVTYNTLI-DGCFELGLSLEARKLMEQMENDGVKANQVT 382
Query: 346 YNLFFRIFYWSNDLQSSWNMYHRMMGL-GCHPNTQSCMFLIRLFKKQEKVEMALQLWGDM 404
+N+ + ++ ++ + G P+ + LI+ + K + AL++ +M
Sbjct: 383 HNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREM 442
Query: 405 VEKGFGSYTLVSDVLFDLLCDMGKLGEA 432
+KG T+ + + D LC KL EA
Sbjct: 443 GQKGIKMNTITLNTILDALCKERKLDEA 470
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 129/274 (47%), Gaps = 6/274 (2%)
Query: 187 SMTDARNVYHSL-KHQFRPNLQTFNILLSGW---KTPEDAEVFFKKM-REMGVTPDVVTY 241
S++ AR V+ + K N+QTFN+L++G+ EDA ++M E V PD VTY
Sbjct: 184 SISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTY 243
Query: 242 NSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKE 301
N+++ K L ++L +M++ L P+ +TY +++ G +G +A +++ MK+
Sbjct: 244 NTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQ 303
Query: 302 YGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQS 361
PD+ YN I C A +RE +L+D M S L P+ TYN +
Sbjct: 304 TNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLE 363
Query: 362 SWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE-KGFGSYTLVSDVLF 420
+ + +M G N + ++ K+EK E + ++V+ GF + L
Sbjct: 364 ARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLI 423
Query: 421 DLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
+G L A + EM +KG K + ++ I
Sbjct: 424 KAYLKVGDLSGALEMMREMGQKGIKMNTITLNTI 457
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 120/253 (47%), Gaps = 1/253 (0%)
Query: 225 FFKKMREMGVTPDVVTYNSLVDVYCKGR-ELEKAYKVLDEMRERDLSPDVITYTSIIGGL 283
+M+ ++P ++TYN++++ +G + E + EMR + PD++TY +++
Sbjct: 198 LLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSAC 257
Query: 284 GLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNA 343
+ G D+A V + M + G PD+ Y+ + F +RL + DL+ EM S G P+
Sbjct: 258 AIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDI 317
Query: 344 TTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGD 403
T+YN+ + S ++ + ++H+M GC PN + L+ LF + + + QL+ +
Sbjct: 318 TSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLE 377
Query: 404 MVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANR 463
M ++L ++ + G E F +M+E+ +P ++ I
Sbjct: 378 MKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGL 437
Query: 464 HEALQNLTQKMAV 476
HE + + Q M
Sbjct: 438 HEDARKILQYMTA 450
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 117/266 (43%), Gaps = 4/266 (1%)
Query: 193 NVYHSLKHQ-FRPNLQTFNILLSGWKT---PEDAEVFFKKMREMGVTPDVVTYNSLVDVY 248
++ ++H+ +P++ T+N LLS ++AE+ F+ M + G+ PD+ TY+ LV+ +
Sbjct: 233 GLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETF 292
Query: 249 CKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDV 308
K R LEK +L EM PD+ +Y ++ G +A V +M+ GC P+
Sbjct: 293 GKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNA 352
Query: 309 PAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHR 368
Y+ + F + R + L EM S +P+A TYN+ +F + ++H
Sbjct: 353 NTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHD 412
Query: 369 MMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGK 428
M+ P+ ++ +I K E A ++ M + + +
Sbjct: 413 MVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAAL 472
Query: 429 LGEAEKCFLEMIEKGQKPSNVSFRRI 454
EA F M E G PS +F +
Sbjct: 473 YEEALVAFNTMHEVGSNPSIETFHSL 498
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 4/238 (1%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSLKHQF-RPNLQTFNILLSGWKTP---EDAEVFF 226
D +N LL + S+ +A V+H ++ PN T+++LL+ + +D F
Sbjct: 316 DITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLF 375
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
+M+ PD TYN L++V+ +G ++ + +M E ++ PD+ TY II G
Sbjct: 376 LEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKG 435
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
G + AR +L+ M P AY I F A EA + M G NP+ T+
Sbjct: 436 GLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETF 495
Query: 347 NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDM 404
+ F ++ S + R++ G N + I +K+ K E A++ + DM
Sbjct: 496 HSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDM 553
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 97/220 (44%), Gaps = 12/220 (5%)
Query: 172 TNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKTP---EDAEVFFKK 228
T A + E+++ A N H + P+++TF+ LL + +++E +
Sbjct: 461 TGVIEAFGQAALYEEALV-AFNTMHEVGSN--PSIETFHSLLYSFARGGLVKESEAILSR 517
Query: 229 MREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQ 288
+ + G+ + T+N+ ++ Y +G + E+A K +M + PD T +++
Sbjct: 518 LVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARL 577
Query: 289 PDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNL 348
D+ R+ +EMK P + Y + + +R + +L++EM S N + + +
Sbjct: 578 VDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLS---NRVSNIHQV 634
Query: 349 FFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLF 388
++ D S+W + ++ N++ C IR +
Sbjct: 635 IGQMIKGDYDDDSNWQIVEYVLD---KLNSEGCGLGIRFY 671
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 163/374 (43%), Gaps = 17/374 (4%)
Query: 117 FNHIWDLLIEA-----RWKD-QTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDF 170
F+ +DL + A + KD Q+++ V ++++ K V F ++
Sbjct: 147 FHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSL 206
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWK---TP-EDAEVF 225
D + +L+ +A NV+ ++ +P L T+N++L+ + TP
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSL 266
Query: 226 FKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGL 285
+KM+ G+ PD TYN+L+ +G ++A +V +EM+ S D +TY +++ G
Sbjct: 267 VEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGK 326
Query: 286 VGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATT 345
+P +A VL EM G P + YN+ I + L EA +L ++M KG P+ T
Sbjct: 327 SHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFT 386
Query: 346 YNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMV 405
Y F + ++S+ +++ M GC PN + I+++ + K ++++ ++
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEIN 446
Query: 406 EKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHE 465
G + + L + G E F EM G P +F L + +
Sbjct: 447 VCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFN------TLISAYS 500
Query: 466 ALQNLTQKMAVFGR 479
+ Q M V+ R
Sbjct: 501 RCGSFEQAMTVYRR 514
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 109/220 (49%), Gaps = 16/220 (7%)
Query: 134 LITPRTVMV-VLARTAKVCSVRQTVEFFRRFKKL-----VPDFDTNCFNALLRTLCQEKS 187
+I PR V++ L C + E R F +L PD T N+++ + +
Sbjct: 589 VIEPRAVLLKTLVLVCSKCDLLPEAE--RAFSELKERGFSPDITT--LNSMVSIYGRRQM 644
Query: 188 MTDARNVYHSLKHQ-FRPNLQTFNILLSGWKTPED---AEVFFKKMREMGVTPDVVTYNS 243
+ A V +K + F P++ T+N L+ D +E +++ G+ PD+++YN+
Sbjct: 645 VAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNT 704
Query: 244 LVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYG 303
++ YC+ + A ++ EMR + PDVITY + IG ++A V++ M ++G
Sbjct: 705 VIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHG 764
Query: 304 CYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNA 343
C P+ YN+ + +C R EA V+++ + L+P+A
Sbjct: 765 CRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL--RNLDPHA 802
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 124/324 (38%), Gaps = 83/324 (25%)
Query: 134 LITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARN 193
++T T++ V + V + +R VP+ +T FN L+ + S A
Sbjct: 454 IVTWNTLLAVFGQNGMDSEVSGVFKEMKR-AGFVPERET--FNTLISAYSRCGSFEQAMT 510
Query: 194 VYHS-LKHQFRPNLQTFNILLSG------WKTPEDAEVFFKKMREMGVTPDVVTYNSLVD 246
VY L P+L T+N +L+ W E +E +M + P+ +TY SL+
Sbjct: 511 VYRRMLDAGVTPDLSTYNTVLAALARGGMW---EQSEKVLAEMEDGRCKPNELTYCSLLH 567
Query: 247 VYCKGRE-----------------------------------LEKAYKVLDEMRERDLSP 271
Y G+E L +A + E++ER SP
Sbjct: 568 AYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSP 627
Query: 272 DVITYTSIIGGLG---LVGQPD--------------------------------KARDVL 296
D+ T S++ G +V + + K+ ++L
Sbjct: 628 DITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEIL 687
Query: 297 KEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWS 356
+E+ G PD+ +YN I +C R+R+A + EM + G+ P+ TYN F +
Sbjct: 688 REILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAAD 747
Query: 357 NDLQSSWNMYHRMMGLGCHPNTQS 380
+ + + + M+ GC PN +
Sbjct: 748 SMFEEAIGVVRYMIKHGCRPNQNT 771
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 86/467 (18%), Positives = 186/467 (39%), Gaps = 60/467 (12%)
Query: 38 VMTIITTTSSPEN----LRQSLKSSGV----FLSNELIDQVLKRVRFSHANPSQTLEFYR 89
++ + +P N L + +KS G+ + N LI KR H +Q E
Sbjct: 249 ILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI-TCCKRGSL-HQEAAQVFE--- 303
Query: 90 YTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWK--DQTLITPRTVMVVLART 147
+ GF + + + +L + G+S +L E +++T +++ AR
Sbjct: 304 -EMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARD 362
Query: 148 AKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNL 206
+ + +E + + D + LL + + A +++ +++ +PN+
Sbjct: 363 GML---DEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNI 419
Query: 207 QTFNILLSGW----KTPEDAEVFFKKMREMGVTPDVV----------------------- 239
TFN + + K E ++F ++ G++PD+V
Sbjct: 420 CTFNAFIKMYGNRGKFTEMMKIF-DEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFK 478
Query: 240 ------------TYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVG 287
T+N+L+ Y + E+A V M + ++PD+ TY +++ L G
Sbjct: 479 EMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGG 538
Query: 288 QPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYN 347
+++ VL EM++ C P+ Y + + + K + + L +E+ S + P A
Sbjct: 539 MWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLK 598
Query: 348 LFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEK 407
+ + L + + + G P+ + ++ ++ +++ V A + M E+
Sbjct: 599 TLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKER 658
Query: 408 GFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
GF + L + G++E+ E++ KG KP +S+ +
Sbjct: 659 GFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTV 705
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 119/264 (45%), Gaps = 5/264 (1%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTPEDAEVFFKKM 229
D +N L+ Q DA ++ + K + +P TF L+ G + K
Sbjct: 151 DACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMK 210
Query: 230 REM----GVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGL 285
+M GV P V Y SL+ C+ EL A+K+ DE E + D Y+++I L
Sbjct: 211 HDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIK 270
Query: 286 VGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATT 345
G+ ++ +L+EM E GC PD YN I FC+ A ++DEM KGL P+ +
Sbjct: 271 AGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVIS 330
Query: 346 YNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMV 405
YN+ +F+ + + ++ M GC P+T S + + + E A + +M+
Sbjct: 331 YNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEML 390
Query: 406 EKGFGSYTLVSDVLFDLLCDMGKL 429
KG+ + LC+ GKL
Sbjct: 391 FKGYKPRRDRLEGFLQKLCESGKL 414
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 174/391 (44%), Gaps = 39/391 (9%)
Query: 80 NPSQTLEFYR-----YTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTL 134
+PS ++ +R T ++ F ++ D ++ LG S+MF+ + +L+ K T
Sbjct: 21 DPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELDQVLL--HLKTDTR 78
Query: 135 ITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEK-------- 186
I P ++ C+V + FF R K +P + F+ + + CQ
Sbjct: 79 IVPTEIIF--------CNV---INFFGRGK--LPSRALHMFDEMPQYRCQRTVKSLNSLL 125
Query: 187 -------SMTDARNVYHSLKHQFRPNLQTFNILLSGWKTP---EDAEVFFKKMREMGVTP 236
+ + S+ +P+ T+NIL+ G +DA F +M + V P
Sbjct: 126 SALLKCGELEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKP 185
Query: 237 DVVTYNSLVDVYCKGRELEKAYKVLDEM-RERDLSPDVITYTSIIGGLGLVGQPDKARDV 295
VT+ +L+ CK +++A K+ +M + + P V Y S+I L +G+ A +
Sbjct: 186 TGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKL 245
Query: 296 LKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYW 355
E E D Y+ I + A R E +++EM+ KG P+ TYN+ F
Sbjct: 246 KDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCV 305
Query: 356 SNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLV 415
ND +S+ + M+ G P+ S ++ +F + +K E A L+ DM +G TL
Sbjct: 306 ENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLS 365
Query: 416 SDVLFDLLCDMGKLGEAEKCFLEMIEKGQKP 446
++FD LC+ + EA EM+ KG KP
Sbjct: 366 YRIVFDGLCEGLQFEEAAVILDEMLFKGYKP 396
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 124/284 (43%), Gaps = 4/284 (1%)
Query: 172 TNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGW-KTP--EDAEVFFK 227
T +++ L +A ++ L+ +P + +N LL G+ KT +DAE
Sbjct: 304 TATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVS 363
Query: 228 KMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVG 287
+M + GV+PD TY+ L+D Y E A VL EM D+ P+ ++ ++ G G
Sbjct: 364 EMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRG 423
Query: 288 QPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYN 347
+ K VLKEMK G PD YN I F L A D M S+G+ P+ T+N
Sbjct: 424 EWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWN 483
Query: 348 LFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEK 407
+ M+ M GC P + +I + QE+ + +L G M +
Sbjct: 484 TLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQ 543
Query: 408 GFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
G + L D+ G+ +A +C EM G KPS+ +
Sbjct: 544 GILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMY 587
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 111/248 (44%), Gaps = 5/248 (2%)
Query: 203 RPNLQTFNILL---SGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCK-GRELEKAY 258
+P+ Q +N+++ + + A F +M G+ PD VT+N+L+D +CK GR + A
Sbjct: 441 KPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHI-VAE 499
Query: 259 KVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNF 318
++ + M R P TY +I G + D + +L +MK G P+V + + +
Sbjct: 500 EMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVY 559
Query: 319 CIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNT 378
+ R +A + ++EM S GL P++T YN + + + N + M G P+
Sbjct: 560 GKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSL 619
Query: 379 QSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLE 438
+ LI F + + A + M E G + L L + K + + E
Sbjct: 620 LALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEE 679
Query: 439 MIEKGQKP 446
MI G KP
Sbjct: 680 MIMSGCKP 687
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 136/326 (41%), Gaps = 6/326 (1%)
Query: 132 QTLITPRT--VMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMT 189
Q+ I PRT +L K ++ +K D + ++ L+
Sbjct: 332 QSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWE 391
Query: 190 DARNVYHSLKH-QFRPNLQTFNILLSGWKTPEDAEVFF---KKMREMGVTPDVVTYNSLV 245
AR V ++ +PN F+ LL+G++ + + F K+M+ +GV PD YN ++
Sbjct: 392 SARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVI 451
Query: 246 DVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCY 305
D + K L+ A D M + PD +T+ ++I G+ A ++ + M+ GC
Sbjct: 452 DTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCL 511
Query: 306 PDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNM 365
P YN I ++ +R + L+ +M S+G+ PN T+ ++ S +
Sbjct: 512 PCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIEC 571
Query: 366 YHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCD 425
M +G P++ LI + ++ E A+ + M G L + L + +
Sbjct: 572 LEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGE 631
Query: 426 MGKLGEAEKCFLEMIEKGQKPSNVSF 451
+ EA M E G KP V++
Sbjct: 632 DRRDAEAFAVLQYMKENGVKPDVVTY 657
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 101/227 (44%)
Query: 225 FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLG 284
+K++ + DV N ++ + K + KA ++L + LS T SII L
Sbjct: 256 LYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALA 315
Query: 285 LVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNAT 344
G+ +A + +E+++ G P AYNA ++ + L++A +V EM +G++P+
Sbjct: 316 DSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEH 375
Query: 345 TYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDM 404
TY+L + + +S+ + M PN+ L+ F+ + + + Q+ +M
Sbjct: 376 TYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEM 435
Query: 405 VEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
G +V+ D L A F M+ +G +P V++
Sbjct: 436 KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTW 482
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 148/352 (42%), Gaps = 14/352 (3%)
Query: 107 MLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKL 166
+++ LGRS + L + QTL TP T ++ A+ + + + + ++
Sbjct: 173 LIHALGRSEKLYEAFLL-----SQKQTL-TPLTYNALIGACARNNDIEKALNLIAKMRQD 226
Query: 167 VPDFDTNCFNALLRTLCQEKSMTDAR--NVYHSL-KHQFRPNLQTFNILLSGWKT---PE 220
D ++ ++++L + + +Y + + + ++Q N ++ G+ P
Sbjct: 227 GYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPS 286
Query: 221 DAEVFFKKMREMGVTPDVVTYNSLVDVYC-KGRELEKAYKVLDEMRERDLSPDVITYTSI 279
A + G++ T S++ GR LE A + +E+R+ + P Y ++
Sbjct: 287 KALQLLGMAQATGLSAKTATLVSIISALADSGRTLE-AEALFEELRQSGIKPRTRAYNAL 345
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
+ G G A ++ EM++ G PD Y+ I + A R A ++ EM + +
Sbjct: 346 LKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDV 405
Query: 340 NPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQ 399
PN+ ++ F + Q ++ + M +G P+ Q +I F K ++ A+
Sbjct: 406 QPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMT 465
Query: 400 LWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+ M+ +G + + L D C G+ AE+ F M +G P ++
Sbjct: 466 TFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTY 517
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 157/351 (44%), Gaps = 20/351 (5%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKTP---EDAEVFF 226
DT+ ++ +L LC M A ++ +K ++ T+ I++ + E A +F
Sbjct: 482 DTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWF 541
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
+MRE+G TP+VVTY +L+ Y K +++ A ++ + M P+++TY+++I G
Sbjct: 542 NEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKA 601
Query: 287 GQPDKARDVLKEM-------------KEY---GCYPDVPAYNAAIRNFCIAKRLREAYDL 330
GQ +KA + + M K+Y P+V Y A + FC + R+ EA L
Sbjct: 602 GQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKL 661
Query: 331 VDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKK 390
+D M+ +G PN Y+ L + + M G + LI + K
Sbjct: 662 LDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFK 721
Query: 391 QEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVS 450
++ ++A ++ M+E ++ + D LC +GK EA K M EKG +P+ V+
Sbjct: 722 VKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVT 781
Query: 451 FRRIKVLMELANRHEALQNLTQKMAVFGRPVQVRESRPVQVHESRESAIDT 501
+ + + + E L ++M G R + H + A+D
Sbjct: 782 YTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDV 832
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 117/255 (45%), Gaps = 16/255 (6%)
Query: 205 NLQTFNILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEM 264
N+ +F L E A ++M G PD TY+ +++ C ++E A+ + +EM
Sbjct: 450 NVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM 509
Query: 265 RERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRL 324
+ L DV TYT ++ G ++AR EM+E GC P+V Y A I + AK++
Sbjct: 510 KRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKV 569
Query: 325 REAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGL------------ 372
A +L + M S+G PN TY+ + ++ + ++ RM G
Sbjct: 570 SYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQ 629
Query: 373 ----GCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGK 428
PN + L+ F K +VE A +L M +G +V D L D LC +GK
Sbjct: 630 YDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGK 689
Query: 429 LGEAEKCFLEMIEKG 443
L EA++ EM E G
Sbjct: 690 LDEAQEVKTEMSEHG 704
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 153/366 (41%), Gaps = 22/366 (6%)
Query: 109 YILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVP 168
Y+ S+M + LL E + + T +++ K + Q ++F +++
Sbjct: 492 YLCNASKM--ELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGC 549
Query: 169 DFDTNCFNALLRTLCQEKSMTDARNVYHS-LKHQFRPNLQTFNILLSGW----------- 216
+ + AL+ + K ++ A ++ + L PN+ T++ L+ G
Sbjct: 550 TPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQ 609
Query: 217 --------KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERD 268
K D +++FK+ + P+VVTY +L+D +CK +E+A K+LD M
Sbjct: 610 IFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG 669
Query: 269 LSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAY 328
P+ I Y ++I GL VG+ D+A++V EM E+G + Y++ I + KR A
Sbjct: 670 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 729
Query: 329 DLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLF 388
++ +M PN Y ++ + M GC PN + +I F
Sbjct: 730 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789
Query: 389 KKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSN 448
K+E L+L M KG + VL D C G L A EM +
Sbjct: 790 GMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHT 849
Query: 449 VSFRRI 454
+R++
Sbjct: 850 AGYRKV 855
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 168/400 (42%), Gaps = 56/400 (14%)
Query: 124 LIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRF--KKLVPD-------FDTNC 174
L E + L T ++ K V + + F R K VPD +D N
Sbjct: 575 LFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNS 634
Query: 175 -------FNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGW---KTPEDAE 223
+ ALL C+ + +AR + ++ + PN ++ L+ G ++A+
Sbjct: 635 ERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQ 694
Query: 224 VFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGL 283
+M E G + TY+SL+D Y K + + A KVL +M E +P+V+ YT +I GL
Sbjct: 695 EVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGL 754
Query: 284 GLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNA 343
VG+ D+A +++ M+E GC P+V Y A I F + ++ +L++ M SKG+ PN
Sbjct: 755 CKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNY 814
Query: 344 TTYNLFFRIFYWSNDLQSSWNMYHRM--------------------------MGL----- 372
TY + + L + N+ M +GL
Sbjct: 815 VTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIG 874
Query: 373 --GCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMV--EKGFGSYTLVSDVLFDLLCDMGK 428
P LI K +++EMAL+L ++ Y+ + L + LC K
Sbjct: 875 QDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 934
Query: 429 LGEAEKCFLEMIEKGQKPSNVSF-RRIKVLMELANRHEAL 467
+ A + F EM +KG P SF IK L + EAL
Sbjct: 935 VETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 111/515 (21%), Positives = 188/515 (36%), Gaps = 141/515 (27%)
Query: 34 DVHRVMTIITTTS--------------------SPENLRQSLKSSGVFLSNELIDQVLKR 73
+VH+V+ IIT +S S + LRQ + LS L+ +VL+
Sbjct: 86 NVHQVVPIITQSSIDARAIADAVSGVDDVFGRKSQKFLRQFREK----LSESLVIEVLRL 141
Query: 74 VRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQT 133
+ A PS + F+ + GR+ G+ HTA ++N + DL++ +D
Sbjct: 142 I----ARPSAVISFFVWAGRQIGYKHTA-------------PVYNALVDLIV----RDDD 180
Query: 134 LITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARN 193
P + + K E F F N L+R C+ S + A
Sbjct: 181 EKVPEEFLQQIRDDDK--------EVFGEF-----------LNVLVRKHCRNGSFSIALE 221
Query: 194 VYHSLKH-QFRPNLQTFNILLSGWKTPEDAEVFFKKMREMGVT----------------- 235
LK +FRP+ T+N L+ + + + REM +
Sbjct: 222 ELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLC 281
Query: 236 ------------------PDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYT 277
PD V Y L+ C+ E+A L+ MR P+V+TY+
Sbjct: 282 KVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYS 341
Query: 278 SIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSK 337
+++ G Q + + VL M GCYP +N+ + +C + AY L+ +M
Sbjct: 342 TLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKC 401
Query: 338 GLNPNATTYNL-----------------------------------------FFRIFYWS 356
G P YN+ F R +
Sbjct: 402 GHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSA 461
Query: 357 NDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVS 416
+ ++++ M+G G P+T + ++ K+E+A L+ +M G +
Sbjct: 462 GKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTY 521
Query: 417 DVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
++ D C G + +A K F EM E G P+ V++
Sbjct: 522 TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTY 556
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 144/334 (43%), Gaps = 40/334 (11%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTPE---DAEVFFKKMR 230
FN +++ LC+ + + A V+ + + + P+ T+ L+ G E +A + +M+
Sbjct: 190 FNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQ 249
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
G +P V YN L+D CK +L + K++D M + P+ +TY ++I GL L G+ D
Sbjct: 250 SEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 309
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKR--------------------------- 323
KA +L+ M C P+ Y I +R
Sbjct: 310 KAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLI 369
Query: 324 --------LREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCH 375
EA L +M KG PN Y++ + + +RM+ GC
Sbjct: 370 SGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCL 429
Query: 376 PNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKC 435
PN + L++ F K E A+Q+W +M + G VL D LC +G++ EA
Sbjct: 430 PNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMV 489
Query: 436 FLEMIEKGQKPSNVSFRR-IKVLMELANRHEALQ 468
+ +M+ G KP V++ IK L + + AL+
Sbjct: 490 WSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALK 523
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 153/353 (43%), Gaps = 35/353 (9%)
Query: 103 SLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRR 162
+L +M+ S F+ + LL R +++ +I R+ +VV K + V+ F R
Sbjct: 79 TLSSMIESYANSGDFDSVEKLLSRIRLENRVIIE-RSFIVVFRAYGKAHLPDKAVDLFHR 137
Query: 163 FKKLVPDF----DTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKT 218
+V +F FN++L + E +YH L+ ++ +++
Sbjct: 138 ---MVDEFRCKRSVKSFNSVLNVIINE-------GLYHR-------GLEFYDYVVNS--- 177
Query: 219 PEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTS 278
M ++P+ +++N ++ CK R +++A +V M ER PD TY +
Sbjct: 178 ----------NMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCT 227
Query: 279 IIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKG 338
++ GL + D+A +L EM+ GC P YN I C L LVD M KG
Sbjct: 228 LMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKG 287
Query: 339 LNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMAL 398
PN TYN L + ++ RM+ C PN + LI KQ + A+
Sbjct: 288 CVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAV 347
Query: 399 QLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+L M E+G+ + VL L GK EA + +M EKG KP+ V +
Sbjct: 348 RLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVY 400
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 155/354 (43%), Gaps = 46/354 (12%)
Query: 142 VVLARTAKVCSVRQTVEFFRRF--KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLK 199
+V+ K+ V + +E FR +K +PD T C L+ LC+E+ + +A + ++
Sbjct: 192 LVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYC--TLMDGLCKEERIDEAVLLLDEMQ 249
Query: 200 HQ-FRPNLQTFNILLSGWKTPEDAEVFFKKMREM---GVTPDVVTYNSLVDVYCKGRELE 255
+ P+ +N+L+ G D K + M G P+ VTYN+L+ C +L+
Sbjct: 250 SEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 309
Query: 256 KAYKVLDEMRERDLSPDVITYTSIIGGL-------------------------------- 283
KA +L+ M P+ +TY ++I GL
Sbjct: 310 KAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLI 369
Query: 284 -GLV--GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLN 340
GL G+ ++A + ++M E GC P++ Y+ + C + EA ++++ M + G
Sbjct: 370 SGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCL 429
Query: 341 PNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQL 400
PNA TY+ + F+ + + + ++ M GC N LI +V+ A+ +
Sbjct: 430 PNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMV 489
Query: 401 WGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMI---EKGQKPSNVSF 451
W M+ G T+ + LC +G + A K + EM+ E +P V++
Sbjct: 490 WSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTY 543
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 133/284 (46%), Gaps = 15/284 (5%)
Query: 165 KLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGW---KTPE 220
K +P+ T + L+ L +++ TDA + S++ + + N +++L+SG E
Sbjct: 322 KCIPNDVT--YGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAE 379
Query: 221 DAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSII 280
+A ++KM E G P++V Y+ LVD C+ + +A ++L+ M P+ TY+S++
Sbjct: 380 EAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLM 439
Query: 281 GGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLN 340
G G ++A V KEM + GC + Y+ I C R++EA + +M + G+
Sbjct: 440 KGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIK 499
Query: 341 PNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGC------HPNTQSCMFLIRLFKKQEKV 394
P+ Y+ + + ++ +YH M+ C P+ + L+ Q+ +
Sbjct: 500 PDTVAYSSIIKGLCGIGSMDAALKLYHEML---CQEEPKSQPDVVTYNILLDGLCMQKDI 556
Query: 395 EMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLE 438
A+ L M+++G + + + L + + + FLE
Sbjct: 557 SRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLE 600
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 114/260 (43%), Gaps = 6/260 (2%)
Query: 222 AEVFFKKMREMG-VTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSII 280
+E FK +MG T +S+++ Y + + K+L +R + ++ +
Sbjct: 60 SEKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVF 119
Query: 281 GGLGLVGQPDKARDVLKEM-KEYGCYPDVPAYNAA---IRNFCIAKRLREAYD-LVDEMT 335
G PDKA D+ M E+ C V ++N+ I N + R E YD +V+
Sbjct: 120 RAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNM 179
Query: 336 SKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVE 395
+ ++PN ++NL + + + ++ M C P+ + L+ K+E+++
Sbjct: 180 NMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERID 239
Query: 396 MALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIK 455
A+ L +M +G ++ +VL D LC G L K M KG P+ V++ +
Sbjct: 240 EAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLI 299
Query: 456 VLMELANRHEALQNLTQKMA 475
+ L + + +L ++M
Sbjct: 300 HGLCLKGKLDKAVSLLERMV 319
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 168/397 (42%), Gaps = 47/397 (11%)
Query: 93 RRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCS 152
++ FF F+ + L +L R R+FN I D+L R + +T + VL A+ S
Sbjct: 91 KKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLR-NENVKLTHEALSHVLHAYAESGS 149
Query: 153 VRQTVEFFRRFKKL---VPDFDTNCFNALLRTLCQEKSMTDARNVYHSL--KHQFRPNLQ 207
+ + VE + +L VPD C N+LL L + + + DAR VY + + N
Sbjct: 150 LSKAVEIYDYVVELYDSVPDV-IAC-NSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYS 207
Query: 208 TFNILLSGWKTPEDAEVFFKKMRE---MGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEM 264
T IL+ G EV K + G P++V YN+++ YCK ++E AY V E+
Sbjct: 208 TC-ILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKEL 266
Query: 265 RERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYG--------------------- 303
+ + P + T+ ++I G G + +L E+KE G
Sbjct: 267 KLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYK 326
Query: 304 --------------CYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLF 349
C PDV YN I C + A +DE + KGL PN +Y
Sbjct: 327 VDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPL 386
Query: 350 FRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGF 409
+ + S + + + +M GC P+ + LI ++ A+ + ++++G
Sbjct: 387 IQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGV 446
Query: 410 GSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKP 446
+ ++L LC G+ A+ F EM+++ P
Sbjct: 447 SPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILP 483
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 112/245 (45%), Gaps = 6/245 (2%)
Query: 164 KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKTP--- 219
K L+P+ + L++ C+ K A + + + +P++ T+ IL+ G
Sbjct: 374 KGLIPN--NLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHM 431
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
+DA K+ + GV+PD YN L+ CK A + EM +R++ PD Y ++
Sbjct: 432 DDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATL 491
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
I G G D+AR V E G DV +NA I+ FC + L EA ++ M + L
Sbjct: 492 IDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHL 551
Query: 340 NPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQ 399
P+ TY+ + D+ ++ ++ M C PN + LI F Q +MA +
Sbjct: 552 VPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEE 611
Query: 400 LWGDM 404
+ +M
Sbjct: 612 TFKEM 616
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 147/350 (42%), Gaps = 36/350 (10%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHS-LKHQFRPNLQTFNILLSGWKTPED---AEVFF 226
D +N L+ LC+ A+ ++ L P+ + L+ G+ D A F
Sbjct: 449 DAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVF 508
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
E GV DVV +N+++ +C+ L++A ++ M E L PD TY++II G V
Sbjct: 509 SLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGY--V 566
Query: 287 GQPDKAR--DVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNAT 344
Q D A + + M++ C P+V Y + I FC + A + EM + L PN
Sbjct: 567 KQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVV 626
Query: 345 TYNLFFR-IFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGD 403
TY R + S+ L+ + + MM C PN + L++ F K+ ++ + G
Sbjct: 627 TYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGS 686
Query: 404 --------------MVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLE--MIEKGQKPS 447
M G+ + + LC G + A C + M++KG P
Sbjct: 687 NHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTA--CMFQDKMVKKGFSPD 744
Query: 448 NVSFRRI-KVLMELAN----RHEALQNLTQKMAVFGRPVQVRESRPVQVH 492
VSF I + N R+ NL +K G V VR S+ ++ H
Sbjct: 745 PVSFAAILHGFCVVGNSKQWRNMDFCNLGEK----GLEVAVRYSQVLEQH 790
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 116/264 (43%), Gaps = 3/264 (1%)
Query: 191 ARNVYHSLKHQFRPNLQTFNILLSGWKTPEDAEV---FFKKMREMGVTPDVVTYNSLVDV 247
A ++ + + +P++ T+NIL++ EV F + + G+ P+ ++Y L+
Sbjct: 330 AESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQA 389
Query: 248 YCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPD 307
YCK +E + A K+L +M ER PD++TY +I GL + G D A ++ ++ + G PD
Sbjct: 390 YCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPD 449
Query: 308 VPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYH 367
YN + C R A L EM + + P+A Y F S D + ++
Sbjct: 450 AAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFS 509
Query: 368 RMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMG 427
+ G + +I+ F + ++ AL M E+ + D
Sbjct: 510 LSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQ 569
Query: 428 KLGEAEKCFLEMIEKGQKPSNVSF 451
+ A K F M + KP+ V++
Sbjct: 570 DMATAIKIFRYMEKNKCKPNVVTY 593
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 96/252 (38%), Gaps = 35/252 (13%)
Query: 235 TPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARD 294
PDV+ NSL+ + K R L A KV DEM +R S D + ++ G+ G+ + R
Sbjct: 167 VPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRK 226
Query: 295 VLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFY 354
+++ GC P++ YN I +C + AY + E+ KG P T+ F
Sbjct: 227 LIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFC 286
Query: 355 WSNDLQSSWNMYHRMMGLG-----------------------------------CHPNTQ 379
D +S + + G C P+
Sbjct: 287 KEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVA 346
Query: 380 SCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEM 439
+ LI K+ K E+A+ + +KG L L C + A K L+M
Sbjct: 347 TYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQM 406
Query: 440 IEKGQKPSNVSF 451
E+G KP V++
Sbjct: 407 AERGCKPDIVTY 418
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 21/207 (10%)
Query: 166 LVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTPED--- 221
LVPD T ++ ++ +++ M A ++ + K++ +PN+ T+ L++G+ D
Sbjct: 551 LVPDKFT--YSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKM 608
Query: 222 AEVFFKKMREMGVTPDVVTYNSLVDVYCK-GRELEKAYKVLDEMRERDLSPDVITYTSII 280
AE FK+M+ + P+VVTY +L+ K LEKA + M P+ +T+ ++
Sbjct: 609 AEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLL 668
Query: 281 GGL------GLVGQPDKAR--------DVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLRE 326
G ++ +PD + + MK G AYN+A+ C+ ++
Sbjct: 669 QGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKT 728
Query: 327 AYDLVDEMTSKGLNPNATTYNLFFRIF 353
A D+M KG +P+ ++ F
Sbjct: 729 ACMFQDKMVKKGFSPDPVSFAAILHGF 755
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 21/153 (13%)
Query: 162 RFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL--KHQFRPNLQTFNILLSGWKTP 219
+ + LVP+ T + L+R+L +E S + Y L ++ PN TFN LL G+
Sbjct: 617 QLRDLVPNVVT--YTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKK 674
Query: 220 EDAEV-----------------FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLD 262
+V FF +M+ G + YNS + C ++ A D
Sbjct: 675 TSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQD 734
Query: 263 EMRERDLSPDVITYTSIIGGLGLVGQPDKARDV 295
+M ++ SPD +++ +I+ G +VG + R++
Sbjct: 735 KMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNM 767
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 178/400 (44%), Gaps = 25/400 (6%)
Query: 28 STLNDGDVHRVMTIITTTSSPENLRQSLKSSGVFLSNELIDQVLKRVRFSHANPSQTLEF 87
S ++ DV + +++++ E +++L+ S V + EL+ +VL R + + L F
Sbjct: 608 SAVDKMDVQEICRVLSSSRDWERTQEALEKSTVQFTPELVVEVL---RHAKIQGNAVLRF 664
Query: 88 YRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVLART 147
+ + G+R G+ H + + + + + G + F + L E R + LIT T +++ +
Sbjct: 665 FSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMR-RQGCLITQDTWAIMIMQY 723
Query: 148 AKVCSVRQTVEFFRRFKK--LVPDFDTNCFNALLRTLCQEKSMTDARNVYHS-------L 198
+ + F+ K L+P T F L+ LC++K RNV + +
Sbjct: 724 GRTGLTNIAIRTFKEMKDMGLIPSSST--FKCLITVLCEKK----GRNVEEATRTFREMI 777
Query: 199 KHQFRPN---LQTFNILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELE 255
+ F P+ +Q + L +DA+ + ++G P V Y+ + C+ +LE
Sbjct: 778 RSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLE 836
Query: 256 KAYKVLDEMR-ERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAA 314
+A L ER L D TY SI+ GL G KA D + MKE G P V Y +
Sbjct: 837 EALSELASFEGERSL-LDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSL 895
Query: 315 IRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGC 374
I F K+L + + +M + P+ TY + ++ +WN + M G
Sbjct: 896 IVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGT 955
Query: 375 HPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTL 414
P+ ++ I + K E AL+L +M++KG T+
Sbjct: 956 SPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTI 995
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/419 (20%), Positives = 178/419 (42%), Gaps = 40/419 (9%)
Query: 35 VHRVMTIITTTSSPENLRQSLKSSGVFLSNELIDQVLKRVRFSHANPSQTLEFYRYTGRR 94
VH + +++ ++ L+ E+++ VLKR P + F+ + ++
Sbjct: 126 VHEITSVVRGDDVLVSMEDRLEKLSFRFEPEIVENVLKRC---FKVPHLAMRFFNWVKQK 182
Query: 95 KGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVR 154
GF H +TML I G +R + + D L+ K+ RT ++++ K +
Sbjct: 183 DGFSHRVGIYNTMLSIAGEARNLDMV-DELVSEMEKNGCDKDIRTWTILISVYGKAKKIG 241
Query: 155 QTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLS 214
+ + F + +K + D +N ++R+LC R +L
Sbjct: 242 KGLLVFEKMRKSGFELDATAYNIMIRSLCIAG----------------RGDL-------- 277
Query: 215 GWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEM-RERDLSP-D 272
A F+K+M E G+T + TY L+D K +++ + D+M R ++S D
Sbjct: 278 -------ALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHD 330
Query: 273 VITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVD 332
Y ++ + G+ +A ++++E+K D + ++ C A R+ +A ++VD
Sbjct: 331 AFGY--LLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVD 388
Query: 333 EMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQE 392
M + L+ ++ Y + + ND+ + + + G P + +++ K +
Sbjct: 389 IMKRRKLD-DSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLK 447
Query: 393 KVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+ E L+ +M+E G ++ + ++ EA K F M EKG KP+ S+
Sbjct: 448 QFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSY 506
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 155/367 (42%), Gaps = 25/367 (6%)
Query: 121 WDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRF-KKLVPDFDTNCFNALL 179
W+ EA K TP V+ VL R AK+ + FF K+ ++ +N +
Sbjct: 628 WERTQEALEKSTVQFTPELVVEVL-RHAKI-QGNAVLRFFSWVGKRNGYKHNSEAYNMSI 685
Query: 180 RTLCQEKSMTDARNVYHSLKHQFRPNLQ-TFNILLSGWKTPEDAEVF---FKKMREMGVT 235
+ K R++++ ++ Q Q T+ I++ + + FK+M++MG+
Sbjct: 686 KVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLI 745
Query: 236 PDVVTYNSLVDVYC--KGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKAR 293
P T+ L+ V C KGR +E+A + EM PD +G L VG A+
Sbjct: 746 PSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAK 805
Query: 294 DVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIF 353
L + + G +P AY+ IR C +L EA + + + TY
Sbjct: 806 SCLDSLGKIG-FPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGL 864
Query: 354 YWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQ----LWGDMVEKGF 409
DLQ + + + M +G P LI F K++++E L+ + G+ E
Sbjct: 865 LQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSV 924
Query: 410 GSYTLVSDVLFDLLC---DMGKLGEAEKCFLEMIEKGQKPSNVSFRR-IKVLMELANRHE 465
+YT ++C +GK+ EA F M E+G P ++ + I L + +
Sbjct: 925 VTYTA-------MICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSED 977
Query: 466 ALQNLTQ 472
AL+ L++
Sbjct: 978 ALKLLSE 984
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 128/296 (43%), Gaps = 3/296 (1%)
Query: 198 LKHQFRPNLQTFNILLSGWKTPEDAEVFFKKMREM-GVTPDVVTYNSLVDVYCKGRELEK 256
L +F P + N+L +K P A FF +++ G + V YN+++ + + R L+
Sbjct: 149 LSFRFEPEI-VENVLKRCFKVPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDM 207
Query: 257 AYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIR 316
+++ EM + D+ T+T +I G + K V ++M++ G D AYN IR
Sbjct: 208 VDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIR 267
Query: 317 NFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHP 376
+ CIA R A + EM KG+ TY + S + ++ M+ +
Sbjct: 268 SLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEIS 327
Query: 377 NTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCF 436
+ +L++ F K++ AL+L ++ K ++L LC ++ +A +
Sbjct: 328 EHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIV 387
Query: 437 LEMIEKGQKPSNVSFRRIKVLMELANRHEALQNLTQKMAVFGRPVQVRESRPVQVH 492
M + SNV I + + +AL+ + + GRP +V + H
Sbjct: 388 DIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQF-EVIKKSGRPPRVSTYTEIMQH 442
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 87/217 (40%), Gaps = 32/217 (14%)
Query: 153 VRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNIL 212
+++ +E R K D F L++ LC+ M DA + +K + + + I+
Sbjct: 345 IKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNVYGII 404
Query: 213 LSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPD 272
+SG Y + ++ KA + + +++ P
Sbjct: 405 ISG--------------------------------YLRQNDVSKALEQFEVIKKSGRPPR 432
Query: 273 VITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVD 332
V TYT I+ L + Q +K ++ EM E G PD A A + R+ EA+ +
Sbjct: 433 VSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFS 492
Query: 333 EMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRM 369
M KG+ P +Y++F + S+ ++++M
Sbjct: 493 SMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQM 529
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 204 PNLQTFNILLSGWKT---PEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKV 260
P++ T+ ++ G+ + E+A F+ M E G +PD TY+ ++ C+ + E A K+
Sbjct: 922 PSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKL 981
Query: 261 LDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKE 298
L EM ++ ++P I + ++ GL G+ D AR L++
Sbjct: 982 LSEMLDKGIAPSTINFRTVFYGLNREGKHDLARIALQK 1019
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 173/418 (41%), Gaps = 32/418 (7%)
Query: 61 FLSNELIDQVLKRVRF--SHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMF- 117
L + + QV+ + + PS + F+ +T H+ S M+ IL + + F
Sbjct: 38 LLKSAITTQVISELSLFSGYGGPSLSWSFFIWTDSLPSSKHSLQSSWKMILILTKHKHFK 97
Query: 118 --NHIWDLLIEARWKDQTLI----------TPRTVMVVLA----RTAKVCSVRQTVEFFR 161
+ + D L + L+ P V V + AK + ++ F
Sbjct: 98 TAHQLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFE 157
Query: 162 RFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILL---SGWK 217
+ + LL +L +++ ++ + K N+ +N+L+ S
Sbjct: 158 QIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSG 217
Query: 218 TPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYT 277
PE AE +M E GV PD+ TYN+L+ VYCK +A V D M ++P+++TY
Sbjct: 218 DPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYN 277
Query: 278 SIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPA----YNAAIRNFCIAKRLREAYDLVDE 333
S I G G+ +A + +E+K+ DV A Y I +C + EA L +
Sbjct: 278 SFIHGFSREGRMREATRLFREIKD-----DVTANHVTYTTLIDGYCRMNDIDEALRLREV 332
Query: 334 MTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEK 393
M S+G +P TYN R ++ + + M G P+ +C LI + K E
Sbjct: 333 MESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIED 392
Query: 394 VEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+ A+++ M+E G L C + +L A++ MIEKG P ++
Sbjct: 393 MVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATY 450
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 113/265 (42%), Gaps = 3/265 (1%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKTPEDAEVFFK---KMRE 231
+N+ + +E M +A ++ +K N T+ L+ G+ D + + M
Sbjct: 276 YNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMES 335
Query: 232 MGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDK 291
G +P VVTYNS++ C+ + +A ++L EM + + PD IT ++I +
Sbjct: 336 RGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVS 395
Query: 292 ARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFR 351
A V K+M E G D+ +Y A I FC L A + + M KG +P TY+
Sbjct: 396 AVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVD 455
Query: 352 IFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGS 411
FY N + G + LIR K E+V+ A L+ M +KG
Sbjct: 456 GFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVG 515
Query: 412 YTLVSDVLFDLLCDMGKLGEAEKCF 436
+++ + GK+ EA F
Sbjct: 516 DSVIFTTMAYAYWRTGKVTEASALF 540
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 135/292 (46%), Gaps = 7/292 (2%)
Query: 164 KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKTP--- 219
K + PD T +N L+ C++ +A +V ++ PN+ T+N + G+
Sbjct: 232 KGVFPDIFT--YNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRM 289
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
+A F+++++ VT + VTY +L+D YC+ ++++A ++ + M R SP V+TY SI
Sbjct: 290 REATRLFREIKD-DVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSI 348
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
+ L G+ +A +L EM PD N I +C + + A + +M GL
Sbjct: 349 LRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGL 408
Query: 340 NPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQ 399
+ +Y F +L+++ M+ G P + +L+ F Q K + +
Sbjct: 409 KLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITK 468
Query: 400 LWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
L + ++G + + L +C + ++ A+ F M +KG +V F
Sbjct: 469 LLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIF 520
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 6/200 (3%)
Query: 164 KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTP--- 219
KK+ PD + C N L+ C+ + M A V + + + ++ ++ L+ G+
Sbjct: 371 KKIEPD-NITC-NTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLEL 428
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
E+A+ M E G +P TY+ LVD + + ++ K+L+E +R L DV Y +
Sbjct: 429 ENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGL 488
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
I + + Q D A+ + + M++ G D + + ++ EA L D M ++ L
Sbjct: 489 IRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRL 548
Query: 340 NPNATTYNLFFRIFYWSNDL 359
N Y + ND+
Sbjct: 549 MVNLKLYKSISASYAGDNDV 568
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 141/292 (48%), Gaps = 22/292 (7%)
Query: 174 CFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTPEDAEVFFKKMREM 232
C+ LL C+E + +A +V + + +L + +L+ G +D ++FF ++EM
Sbjct: 614 CYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEM 673
Query: 233 ---GVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQP 289
G+ PD V Y S++D K + ++A+ + D M P+ +TYT++I GL G
Sbjct: 674 HDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFV 733
Query: 290 DKARDVLKEMK---------EYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLN 340
++A + +M+ YGC+ D+ +++A +L + + KGL
Sbjct: 734 NEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEV--------DMQKAVELHNAIL-KGLL 784
Query: 341 PNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQL 400
N TYN+ R F ++ + + RM+G G P+ + +I ++ V+ A++L
Sbjct: 785 ANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIEL 844
Query: 401 WGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFR 452
W M EKG + + L C G++G+A + EM+ +G P+N + R
Sbjct: 845 WNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSR 896
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 106/454 (23%), Positives = 185/454 (40%), Gaps = 62/454 (13%)
Query: 60 VFLSNELIDQVLKRVRFSHA------NPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGR 113
+ LS+EL+ + LK V +P L F+ + G +GF H+ S +++ L +
Sbjct: 57 IALSSELVSRRLKTVHVEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVK 116
Query: 114 SRMF-----------------------------------NHIWDLLIEA-----RWKDQT 133
+ +F + +DLLI+ R D
Sbjct: 117 ANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGV 176
Query: 134 LI------------TPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRT 181
L+ RT+ +L K +E F + D + ++R+
Sbjct: 177 LVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRS 236
Query: 182 LCQEKSMTDARN-VYHSLKHQFRPNLQTFNILLSGWKTPE---DAEVFFKKMREMGVTPD 237
LC+ K ++ A+ + H N+ +N+L+ G + +A K + + PD
Sbjct: 237 LCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPD 296
Query: 238 VVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLK 297
VVTY +LV CK +E E +++DEM SP +S++ GL G+ ++A +++K
Sbjct: 297 VVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVK 356
Query: 298 EMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSN 357
+ ++G P++ YNA I + C ++ EA L D M GL PN TY++ +F
Sbjct: 357 RVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRG 416
Query: 358 DLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSD 417
L ++ + M+ G + LI K + A +M+ K +
Sbjct: 417 KLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYT 476
Query: 418 VLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
L C GK+ +A + + EM KG PS +F
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTF 510
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 133/303 (43%), Gaps = 24/303 (7%)
Query: 164 KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGW---KTP 219
KKL P T + +L+ C + + A +YH + + P++ TF LLSG
Sbjct: 466 KKLEPTVVT--YTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLI 523
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
DA F +M E V P+ VTYN +++ YC+ ++ KA++ L EM E+ + PD +Y +
Sbjct: 524 RDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPL 583
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
I GL L GQ +A+ + + + C + Y + FC +L EA + EM +G+
Sbjct: 584 IHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643
Query: 340 NPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQ 399
+ + Y + D + + + M G P+ +I K + A
Sbjct: 644 DLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFG 703
Query: 400 LWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAE------------------KCFLEMIE 441
+W M+ +G + + + LC G + EAE CFL+++
Sbjct: 704 IWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILT 763
Query: 442 KGQ 444
KG+
Sbjct: 764 KGE 766
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 133/293 (45%), Gaps = 6/293 (2%)
Query: 164 KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHS-LKHQFRPNLQTFNILLSGWKT---P 219
K L PD T C L+ LC+ + + L +F P+ + L+ G +
Sbjct: 291 KDLKPDVVTYC--TLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKI 348
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
E+A K++ + GV+P++ YN+L+D CKGR+ +A + D M + L P+ +TY+ +
Sbjct: 349 EEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSIL 408
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
I G+ D A L EM + G V YN+ I C + A + EM +K L
Sbjct: 409 IDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKL 468
Query: 340 NPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQ 399
P TY + + + +YH M G G P+ + L+ + + A++
Sbjct: 469 EPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVK 528
Query: 400 LWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFR 452
L+ +M E + +V+ + C+ G + +A + EM EKG P S+R
Sbjct: 529 LFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYR 581
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 114/244 (46%), Gaps = 4/244 (1%)
Query: 204 PNLQTFNIL---LSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKV 260
PNL +N L L + +AE+ F +M ++G+ P+ VTY+ L+D++C+ +L+ A
Sbjct: 365 PNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSF 424
Query: 261 LDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCI 320
L EM + L V Y S+I G G A + EM P V Y + + +C
Sbjct: 425 LGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCS 484
Query: 321 AKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQS 380
++ +A L EMT KG+ P+ T+ + + ++ + +++ M PN +
Sbjct: 485 KGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVT 544
Query: 381 CMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMI 440
+I + ++ + A + +M EKG T L LC G+ EA K F++ +
Sbjct: 545 YNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGL 603
Query: 441 EKGQ 444
KG
Sbjct: 604 HKGN 607
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 137/289 (47%), Gaps = 18/289 (6%)
Query: 168 PDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGW---KTPEDAE 223
PD T ++L+ C S+ DA V + K + ++ IL+ + A
Sbjct: 11 PDIVTA--SSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPAL 68
Query: 224 VFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGL 283
K+M++ G++P+VVTY+SL+ CK L A + L EM + ++P+VIT++++I
Sbjct: 69 EVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAY 128
Query: 284 GLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNA 343
G+ K V K M + P+V Y++ I C+ R+ EA ++D M SKG PN
Sbjct: 129 AKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNV 188
Query: 344 TTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGD 403
TY+ F+ S+ + + M G NT SC LI+ + + K+++AL ++G
Sbjct: 189 VTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGY 248
Query: 404 MVEKGF----GSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSN 448
M G SY +V LF GE EK L E QK N
Sbjct: 249 MTSNGLIPNIRSYNIVLAGLF-------ANGEVEKA-LSRFEHMQKTRN 289
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 159/351 (45%), Gaps = 21/351 (5%)
Query: 152 SVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFN 210
S++ V + +K+ D L+ TLC+ + + A V +K + PN+ T++
Sbjct: 28 SIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYS 87
Query: 211 ILLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRER 267
L++G DAE +M + P+V+T+++L+D Y K +L K V M +
Sbjct: 88 SLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQM 147
Query: 268 DLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREA 327
+ P+V TY+S+I GL + + D+A +L M GC P+V Y+ F + R+ +
Sbjct: 148 SIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDG 207
Query: 328 YDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSC-MFLIR 386
L+D+M +G+ N + N + ++ + + + ++ M G PN +S + L
Sbjct: 208 IKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAG 267
Query: 387 LFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKP 446
LF E VE AL + M + + ++ +C + EA F ++ K +P
Sbjct: 268 LFANGE-VEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEP 326
Query: 447 SNVSFRRIKVLMELANR------HEALQNLTQKMAVFGRPVQVRESRPVQV 491
F+ +++ NR +AL QK V+ ES P +V
Sbjct: 327 ---DFKAYTIMIAELNRAGMRTEADALNRFYQK------HVRQNESAPAEV 368
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 80/189 (42%)
Query: 263 EMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAK 322
+M + + PD++T +S++ G L A V +M++ G DV I C +
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 323 RLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCM 382
+ A +++ M +G++PN TY+ S L + H M +PN +
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 383 FLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEK 442
LI + K+ K+ ++ M++ L LC ++ EA K MI K
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 443 GQKPSNVSF 451
G P+ V++
Sbjct: 183 GCTPNVVTY 191
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 90/418 (21%), Positives = 187/418 (44%), Gaps = 45/418 (10%)
Query: 83 QTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIE-----ARWKDQTLITP 137
L+F+R+T R H + M+ +LG NH +L++ W + +
Sbjct: 132 HALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFV-- 189
Query: 138 RTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHS 197
V++ K V+++V+ F++ K L + +N+L + + + A+ ++
Sbjct: 190 ----VLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNK 245
Query: 198 LKHQ-FRPNLQTFNILLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRE 253
+ + P T+N++L G+ E A FF+ M+ G++PD T+N++++ +C+ ++
Sbjct: 246 MVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKK 305
Query: 254 LEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNA 313
+++A K+ EM+ + P V++YT++I G V + D + +EM+ G P+ Y+
Sbjct: 306 MDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYST 365
Query: 314 AIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYW---SNDLQSSWNMYHRMM 370
+ C A ++ EA +++ M +K + P + +F ++ + D+ ++ + M
Sbjct: 366 LLPGLCDAGKMVEAKNILKNMMAKHIAPKDNS--IFLKLLVSQSKAGDMAAATEVLKAMA 423
Query: 371 GLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGF---GSYTL-----VSDVLFDL 422
L LI K A++L ++EK TL + + +
Sbjct: 424 TLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEY 483
Query: 423 LCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEALQNLTQKMAVFGRP 480
LC+ G+ +AE F +++++G +AL NL + A G P
Sbjct: 484 LCNNGQTAKAEVLFRQLMKRG-----------------VQDQDALNNLIRGHAKEGNP 524
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 111/256 (43%), Gaps = 1/256 (0%)
Query: 229 MREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQ 288
M E GV D + L++ Y K ++++ K+ +M++ + + +Y S+ + G+
Sbjct: 176 MPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGR 235
Query: 289 PDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNL 348
A+ +M G P YN + F ++ RL A ++M ++G++P+ T+N
Sbjct: 236 YMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNT 295
Query: 349 FFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKG 408
F + + ++ M G P+ S +I+ + ++V+ L+++ +M G
Sbjct: 296 MINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSG 355
Query: 409 FGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVS-FRRIKVLMELANRHEAL 467
L LCD GK+ EA+ M+ K P + S F ++ V A A
Sbjct: 356 IEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAA 415
Query: 468 QNLTQKMAVFGRPVQV 483
+ + MA P +
Sbjct: 416 TEVLKAMATLNVPAEA 431
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 116/290 (40%), Gaps = 17/290 (5%)
Query: 150 VCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL--KHQFRPNLQ 207
V V + F + + + ++ LL LC M +A+N+ ++ KH +
Sbjct: 338 VDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNS 397
Query: 208 TFNILLSGWKTPED---AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEM 264
F LL D A K M + V + Y L++ CK +A K+LD +
Sbjct: 398 IFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTL 457
Query: 265 RERD--------LSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIR 316
E++ L + Y II L GQ KA + +++ + G D A N IR
Sbjct: 458 IEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGV-QDQDALNNLIR 516
Query: 317 NFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHP 376
+Y+++ M+ +G+ + Y L + + + + M+ G P
Sbjct: 517 GHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVP 576
Query: 377 NTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG---SYTLVSDVLFDLL 423
++ +I + +V+ A ++ M++K G + L++ +L LL
Sbjct: 577 DSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALL 626
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 190/412 (46%), Gaps = 29/412 (7%)
Query: 61 FLSNELIDQVLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHI 120
F+S+E ++KR R +P L+ + ++KGF H + +L L R + F +
Sbjct: 53 FISHESAVSLMKRER----DPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAV 108
Query: 121 WDLLIEARWKDQTLITPRTVMVVLART-------AKVCSVRQTVEFFRRFKKLVPDFDTN 173
+L + ++ +T ++ + L R KV + ++ R K + T
Sbjct: 109 DAILHQMKY--ETCRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAIST- 165
Query: 174 CFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKTPEDAEVFF---KKMR 230
C N L+ + E +++ +Y +PN FNIL+ D F ++M+
Sbjct: 166 CLNLLIDS--GEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMK 223
Query: 231 EMGVT-PDVVTYNSLVDVYCKGRELEKAYKVLDEMRERD-LSPDVITYTSIIGGLGLVGQ 288
G++ P+ +TY++L+D ++A ++ ++M ++ +SPD +T+ +I G G+
Sbjct: 224 RSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGE 283
Query: 289 PDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNL 348
++A+ +L MK+ GC P+V Y+A + FC +++EA DE+ GL + Y
Sbjct: 284 VERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTT 343
Query: 349 FFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQL---WG-DM 404
F + + + + M C +T + ++R + + E ALQ+ WG +
Sbjct: 344 LMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEG 403
Query: 405 VEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKV 456
V GSY ++ + LC G+L +A K M E+G P + ++ + V
Sbjct: 404 VHLNKGSYRII----LNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVV 451
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 131/326 (40%), Gaps = 20/326 (6%)
Query: 18 PN-LILSRLLSSTLNDGDVHRVMTIITTTSSPENLRQSLKSSGVFLSNELIDQVLKRVRF 76
PN I + L+ +GD++ ++ + +K SG+ N + L F
Sbjct: 194 PNTCIFNILVKHHCKNGDINFAFLVV----------EEMKRSGISYPNSITYSTLMDCLF 243
Query: 77 SHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLL--IEARWKDQTL 134
+H+ + +E + ++G + + M+ R+ +L ++ + +
Sbjct: 244 AHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNV 303
Query: 135 ITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNV 194
+M + K+ +QT F KK DT + L+ C+ +A +
Sbjct: 304 YNYSALMNGFCKVGKIQEAKQT---FDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKL 360
Query: 195 YHSLK-HQFRPNLQTFNILLSGWKT---PEDAEVFFKKMREMGVTPDVVTYNSLVDVYCK 250
+K + R + T+N++L G + E+A + GV + +Y +++ C
Sbjct: 361 LGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCC 420
Query: 251 GRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPA 310
ELEKA K L M ER + P T+ ++ L G + VL G P +
Sbjct: 421 NGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKS 480
Query: 311 YNAAIRNFCIAKRLREAYDLVDEMTS 336
+ A + + C ++L ++L+D + S
Sbjct: 481 WGAVVESICKERKLVHVFELLDSLVS 506
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 132/280 (47%), Gaps = 5/280 (1%)
Query: 175 FNALLRTLCQEKSMTDARNVYHS-LKHQFRPNLQTFNILLSGW---KTPEDAEVFFKKMR 230
+N ++ C+ K+M AR+++ L+ PN T++IL+ G+ K ++A +M
Sbjct: 487 YNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMN 546
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEM-RERDLSPDVITYTSIIGGLGLVGQP 289
+ V YN++++ CK + KA ++L + +E+ S +Y SII G VG
Sbjct: 547 ASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDT 606
Query: 290 DKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLF 349
D A + +EM E G P+V + + I FC + R+ A ++ EM S L + Y
Sbjct: 607 DSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGAL 666
Query: 350 FRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGF 409
F ND+++++ ++ + LG PN LI F+ K++ A+ L+ MV G
Sbjct: 667 IDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGI 726
Query: 410 GSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNV 449
+ D L G + A + E+++ G P +
Sbjct: 727 SCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEI 766
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 133/280 (47%), Gaps = 9/280 (3%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLK-HQFRPNLQTFNILLSGW----KTPEDAEVFFKKM 229
++ L+ + K +A +V + + F N +N +++G +T + E+ +
Sbjct: 522 YSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLI 581
Query: 230 REMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQP 289
+E + +YNS++D + K + + A + EM E SP+V+T+TS+I G +
Sbjct: 582 KEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRM 641
Query: 290 DKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLF 349
D A ++ EMK D+PAY A I FC ++ AY L E+ GL PN + YN
Sbjct: 642 DLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSL 701
Query: 350 FRIFYWSNDLQSSWNMYHRMM--GLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEK 407
F + ++ ++Y +M+ G+ C T + M I K + +A L+ ++++
Sbjct: 702 ISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTM--IDGLLKDGNINLASDLYSELLDL 759
Query: 408 GFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPS 447
G ++ VL + L G+ +A K EM +K P+
Sbjct: 760 GIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPN 799
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 133/282 (47%), Gaps = 7/282 (2%)
Query: 169 DFDTN--CFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQ--TFNILLSGWKTPEDAEV 224
+F+ N +N ++ LC+ + A+ + +L + R ++ ++N ++ G+ D +
Sbjct: 549 NFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDS 608
Query: 225 FFKKMREM---GVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIG 281
+ REM G +P+VVT+ SL++ +CK ++ A ++ EM+ +L D+ Y ++I
Sbjct: 609 AVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALID 668
Query: 282 GLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNP 341
G A + E+ E G P+V YN+ I F ++ A DL +M + G++
Sbjct: 669 GFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISC 728
Query: 342 NATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLW 401
+ TY ++ + ++Y ++ LG P+ M L+ K+ + A ++
Sbjct: 729 DLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKML 788
Query: 402 GDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKG 443
+M +K L+ + G L EA + EM+EKG
Sbjct: 789 EEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKG 830
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 137/282 (48%), Gaps = 9/282 (3%)
Query: 176 NALLRTLCQEKSMTDARNVYHS--LKHQFRPNLQTFNILLSGWK--TPEDAEVFFKKMRE 231
N +L +L + + +A+ +Y+ L N+ T ++ + + PE+A F+++
Sbjct: 208 NNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMS 267
Query: 232 MGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSP-DVITYTSIIGGLGLVGQPD 290
G PD + ++ V CK +L A +L EMR + P TYTS+I G +
Sbjct: 268 RGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNME 327
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
+A V+ EM +G V A + + +C L +A DL + M +GL P+ +++
Sbjct: 328 EAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMV 387
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG 410
F + +++ + Y RM + P++ +I+ K E E AL+++ D E
Sbjct: 388 EWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWI- 446
Query: 411 SYTLVSDVLFDLLCDMGKLGEAEKCFLEMIE-KGQKPSNVSF 451
++ + + +F L C GK+ +A FL+M+E KG +P NV F
Sbjct: 447 AHGFMCNKIFLLFCKQGKV-DAATSFLKMMEQKGIEP-NVVF 486
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 4/198 (2%)
Query: 156 TVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKH-QFRPNLQTFNILLS 214
+E K + D + AL+ C++ M A ++ L PN+ +N L+S
Sbjct: 644 ALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLIS 703
Query: 215 GWKT--PEDAEV-FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSP 271
G++ DA + +KKM G++ D+ TY +++D K + A + E+ + + P
Sbjct: 704 GFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVP 763
Query: 272 DVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLV 331
D I + ++ GL GQ KA +L+EMK+ P+V Y+ I L EA+ L
Sbjct: 764 DEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLH 823
Query: 332 DEMTSKGLNPNATTYNLF 349
DEM KG+ + T +NL
Sbjct: 824 DEMLEKGIVHDDTVFNLL 841
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 123/285 (43%), Gaps = 35/285 (12%)
Query: 225 FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPD-VITYTSIIGGL 283
F +M E G+ PD V ++ +V+ +CK E+EKA + M+ ++P V+ +T I G L
Sbjct: 367 LFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCL 426
Query: 284 ----------------------GLV-----------GQPDKARDVLKEMKEYGCYPDVPA 310
G + G+ D A LK M++ G P+V
Sbjct: 427 KAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVF 486
Query: 311 YNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMM 370
YN + C K + A + EM KGL PN TY++ F+ + D Q++W++ ++M
Sbjct: 487 YNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMN 546
Query: 371 GLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMV-EKGFGSYTLVSDVLFDLLCDMGKL 429
N +I K + A ++ +++ EK + + + D +G
Sbjct: 547 ASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDT 606
Query: 430 GEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEALQNLTQKM 474
A + + EM E G+ P+ V+F + +NR + +T +M
Sbjct: 607 DSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEM 651
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 106/235 (45%), Gaps = 5/235 (2%)
Query: 149 KVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKH-QFRPNLQ 207
KV VE +R + + F +L+ C+ M A + H +K + + +L
Sbjct: 602 KVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLP 661
Query: 208 TFNILLSGWKTPED---AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEM 264
+ L+ G+ D A F ++ E+G+ P+V YNSL+ + +++ A + +M
Sbjct: 662 AYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKM 721
Query: 265 RERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRL 324
+S D+ TYT++I GL G + A D+ E+ + G PD + + +
Sbjct: 722 VNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQF 781
Query: 325 REAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLG-CHPNT 378
+A +++EM K + PN Y+ + +L ++ ++ M+ G H +T
Sbjct: 782 LKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDT 836
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 163/377 (43%), Gaps = 26/377 (6%)
Query: 80 NPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRT 139
+P L F + R F H S +++ +L + + P+
Sbjct: 39 DPQTALSFSDWISRIPNFKHNVTSYASLVTLLCSQEIPYEV----------------PKI 82
Query: 140 VMVVLARTAKVCSVRQTVEFFRRFKK-----LVPDFDTNCFNALLRTLCQEKSMTDARNV 194
++++ V V+F R +K + C+N LL +L + + + + +
Sbjct: 83 TILMIKSCNSVRDALFVVDFCRTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRL 142
Query: 195 Y-HSLKHQFRPNLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCK 250
Y L+ P++ TFN L++G+ +A+ + + + G PD TY S + +C+
Sbjct: 143 YTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCR 202
Query: 251 GRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPA 310
+E++ A+KV EM + + ++YT +I GL + D+A +L +MK+ C P+V
Sbjct: 203 RKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRT 262
Query: 311 YNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMM 370
Y I C + + EA +L +M+ G+ P+ Y + + F + L + + M+
Sbjct: 263 YTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHML 322
Query: 371 GLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLG 430
G PN + LI+ F K+ V A+ L M+E+ + + L C G L
Sbjct: 323 ENGLMPNVITYNALIKGFCKK-NVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLD 381
Query: 431 EAEKCFLEMIEKGQKPS 447
A + M E G P+
Sbjct: 382 SAYRLLSLMEESGLVPN 398
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 8/202 (3%)
Query: 151 CSVRQTVEFFRRFKKLVPDF---DTNCFNALLRTLCQEKSMTDARNVYHSLKH-QFRPNL 206
C ++ F+ FK++ + + + L+ L + K + +A ++ +K PN+
Sbjct: 201 CRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNV 260
Query: 207 QTFNIL---LSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDE 263
+T+ +L L G +A FK+M E G+ PD Y L+ +C G L++A +L+
Sbjct: 261 RTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEH 320
Query: 264 MRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKR 323
M E L P+VITY ++I G KA +L +M E PD+ YN I C +
Sbjct: 321 MLENGLMPNVITYNALIKGF-CKKNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGN 379
Query: 324 LREAYDLVDEMTSKGLNPNATT 345
L AY L+ M GL PN T
Sbjct: 380 LDSAYRLLSLMEESGLVPNQRT 401
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 7/217 (3%)
Query: 168 PDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGW---KTPEDAE 223
PD+ T + + + C+ K + A V+ + ++ N ++ L+ G K ++A
Sbjct: 188 PDYFT--YTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEAL 245
Query: 224 VFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGL 283
KM++ P+V TY L+D C + +A + +M E + PD YT +I
Sbjct: 246 SLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSF 305
Query: 284 GLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNA 343
D+A +L+ M E G P+V YNA I+ FC K + +A L+ +M + L P+
Sbjct: 306 CSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFC-KKNVHKAMGLLSKMLEQNLVPDL 364
Query: 344 TTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQS 380
TYN S +L S++ + M G PN ++
Sbjct: 365 ITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 4/272 (1%)
Query: 176 NALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKTP---EDAEVFFKKMRE 231
NAL+++ + + + V+ +K P L T+N L++G + + AE F+ M
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 232 MGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDK 291
+ PD+VTYN+++ YCK + +KA + L +M R D ITY ++I
Sbjct: 251 GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGS 310
Query: 292 ARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFR 351
+ +EM E G A++ I C +L E Y + + M KG PN Y +
Sbjct: 311 CVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLID 370
Query: 352 IFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGS 411
+ S ++ + + HRM+ G P+ + ++ K +VE AL + G
Sbjct: 371 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAI 430
Query: 412 YTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKG 443
++ L D L G++ EAE+ F EM EKG
Sbjct: 431 NSMFYSSLIDGLGKAGRVDEAERLFEEMSEKG 462
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 143/308 (46%), Gaps = 7/308 (2%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWK---TPEDAEVFFKKMR 230
F+ ++ LC+E + + V+ ++ + +PN+ + +L+ G+ + EDA +M
Sbjct: 330 FSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMI 389
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
+ G PDVVTY+ +V+ CK +E+A R L+ + + Y+S+I GLG G+ D
Sbjct: 390 DEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVD 449
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEM-TSKGLNPNATTYNLF 349
+A + +EM E GC D YNA I F +++ EA L M +G + TY +
Sbjct: 450 EAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTIL 509
Query: 350 FRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGF 409
+ + + + ++ M+ G P L KV A ++ ++ G
Sbjct: 510 LSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGV 569
Query: 410 GSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQK-PSNVSFRRIKVLMELANRHEALQ 468
D++ + LC G++ EA K + E+G++ P + I L ++ A++
Sbjct: 570 ILDAACEDMI-NTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMK 628
Query: 469 NLTQKMAV 476
+ K+ +
Sbjct: 629 LMHSKIGI 636
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 96/214 (44%)
Query: 238 VVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLK 297
V N+L+ + K +E+ V +M+E + P + TY ++ GL D A V +
Sbjct: 187 VSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFE 246
Query: 298 EMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSN 357
M+ PD+ YN I+ +C A + ++A + + +M ++G + TY + Y +
Sbjct: 247 VMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADS 306
Query: 358 DLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSD 417
D S +Y M G + +I K+ K+ ++ +M+ KG +
Sbjct: 307 DFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYT 366
Query: 418 VLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
VL D G + +A + MI++G KP V++
Sbjct: 367 VLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTY 400
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 145/316 (45%), Gaps = 49/316 (15%)
Query: 164 KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKTP--- 219
+++ PD T FNAL+ +E + +A + + H+ P+ T+N ++ G+
Sbjct: 360 REINPDVLT--FNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRF 417
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
+DA K M ++ +PDVVT+N+++DVYC+ + +++ ++L E+ R L + TY ++
Sbjct: 418 DDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYP--------------------------------- 306
I G V + A+D+ +EM +G P
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI 533
Query: 307 --DVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWN 364
D AYN I C ++ EA+DL + G+ P+ TYN+ F + + +
Sbjct: 534 DLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV 593
Query: 365 MYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLC 424
++H+M G P+ + LIR K +++ +++L +M GF ++ DL+
Sbjct: 594 LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLIT 653
Query: 425 DMGKLGEAEKCFLEMI 440
D G +K F +M+
Sbjct: 654 D----GRLDKSFSDML 665
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 140/345 (40%), Gaps = 58/345 (16%)
Query: 160 FRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVY----------------HSLKHQFR 203
F + KL D FN LL LC E +++A ++ ++
Sbjct: 164 FGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLT 223
Query: 204 PNLQTFNILLSGWKTPE---DAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKV 260
P + TFN L++G +A KM G+ DVVTY ++V+ CK + + A +
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 261 LDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCI 320
L +M E + PDV+ Y++II L G A+ + EM E G P+V YN I FC
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343
Query: 321 AKR-----------------------------------LREAYDLVDEMTSKGLNPNATT 345
R L EA L DEM + + P+ T
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403
Query: 346 YNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMV 405
YN F N + +M+ M P+ + +I ++ + ++V+ +QL ++
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459
Query: 406 EKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVS 450
+G + T + L C++ L A+ F EMI G P ++
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 138/319 (43%), Gaps = 35/319 (10%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHS-LKHQFRPNLQTFNILLSGWKTP---EDAEVFF 226
D ++A++ LC++ +DA+ ++ L+ PN+ T+N ++ G+ + DA+
Sbjct: 295 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 354
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRER------------------- 267
+ M E + PDV+T+N+L+ K +L +A K+ DEM R
Sbjct: 355 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 414
Query: 268 ----------DL--SPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAI 315
DL SPDV+T+ +II + D+ +L+E+ G + YN I
Sbjct: 415 NRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474
Query: 316 RNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCH 375
FC L A DL EM S G+ P+ T N+ F + L+ + ++ +
Sbjct: 475 HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKID 534
Query: 376 PNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKC 435
+T + +I K KV+ A L+ + G +V+ C + +A
Sbjct: 535 LDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVL 594
Query: 436 FLEMIEKGQKPSNVSFRRI 454
F +M + G +P N ++ +
Sbjct: 595 FHKMKDNGHEPDNSTYNTL 613
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 135/305 (44%), Gaps = 37/305 (12%)
Query: 51 LRQSLKSSGVFLSNELIDQVLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYI 110
+ S+K +F + +L D++L R F + ++M+Y
Sbjct: 373 ISASVKEGKLFEAEKLCDEMLHRC----------------------IFPDTVTYNSMIYG 410
Query: 111 LGRSRMFN---HIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLV 167
+ F+ H++DL+ ++T T++ V R +V + ++ R +
Sbjct: 411 FCKHNRFDDAKHMFDLM-----ASPDVVTFNTIIDVYCRAKRV---DEGMQLLREISRRG 462
Query: 168 PDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGW---KTPEDAE 223
+T +N L+ C+ ++ A++++ + H P+ T NILL G+ + E+A
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 522
Query: 224 VFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGL 283
F+ ++ + D V YN ++ CKG ++++A+ + + + PDV TY +I G
Sbjct: 523 ELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF 582
Query: 284 GLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNA 343
A + +MK+ G PD YN IR A + ++ +L+ EM S G + +A
Sbjct: 583 CGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDA 642
Query: 344 TTYNL 348
T +
Sbjct: 643 FTIKM 647
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 108/251 (43%), Gaps = 15/251 (5%)
Query: 219 PEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTS 278
P+ A ++KM + ++ ++N L+ +C +L + ++ + PDV+T+ +
Sbjct: 122 PDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNT 181
Query: 279 IIGGLGLVGQPDKAR---------------DVLKEMKEYGCYPDVPAYNAAIRNFCIAKR 323
++ GL L + +A + +M E G P V +N I C+ R
Sbjct: 182 LLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGR 241
Query: 324 LREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMF 383
+ EA LV++M KGL+ + TY D +S+ N+ +M P+
Sbjct: 242 VLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSA 301
Query: 384 LIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKG 443
+I K A L+ +M+EKG + + D C G+ +A++ +MIE+
Sbjct: 302 IIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE 361
Query: 444 QKPSNVSFRRI 454
P ++F +
Sbjct: 362 INPDVLTFNAL 372
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 138/321 (42%), Gaps = 8/321 (2%)
Query: 138 RTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHS 197
R V +L + VE F R + V D +NA++ + + A+ + +
Sbjct: 192 RMVAAILGVLGRWNQESLAVEIFTRAEPTVGD-RVQVYNAMMGVYSRSGKFSKAQELVDA 250
Query: 198 LKHQ-FRPNLQTFNILL-----SGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKG 251
++ + P+L +FN L+ SG TP A +R G+ PD +TYN+L+ +
Sbjct: 251 MRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRD 310
Query: 252 RELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAY 311
L+ A KV ++M PD+ TY ++I G G +A + E++ G +PD Y
Sbjct: 311 SNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTY 370
Query: 312 NAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMG 371
N+ + F + + ++ +M G + TYN ++ L + +Y M G
Sbjct: 371 NSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKG 430
Query: 372 L-GCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLG 430
L G +P+ + LI K + A L +M++ G L GK
Sbjct: 431 LSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKRE 490
Query: 431 EAEKCFLEMIEKGQKPSNVSF 451
EAE F M+ G KP N+++
Sbjct: 491 EAEDTFSCMLRSGTKPDNLAY 511
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 122/312 (39%), Gaps = 39/312 (12%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKHQFR-PNLQTFNILLSGWKTP---EDAEVFFKKMR 230
+ ++ ++K A +V +L+ R P+L+T+N L+S + E A F M
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
G +P V + N L+ C LE+ Y V++E+++ + ++ G
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSK------------- 337
+ + + MK G P + Y I C KR+R+A +V EM
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSML 934
Query: 338 ----------------------GLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCH 375
GL P+ TTYN ++ + + + +M LG
Sbjct: 935 KMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLD 994
Query: 376 PNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKC 435
P + LI F KQ+ +E A QL+ +++ KG + + D G +AEK
Sbjct: 995 PKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKL 1054
Query: 436 FLEMIEKGQKPS 447
M G +P+
Sbjct: 1055 LQMMKNAGIEPT 1066
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 7/193 (3%)
Query: 163 FKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTPED 221
K PD T +N+LL +E++ + VY + K F + T+N ++ +
Sbjct: 360 LKGFFPDAVT--YNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQ 417
Query: 222 AEVFFKKMREM----GVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYT 277
++ + ++M G PD +TY L+D K +A ++ EM + + P + TY+
Sbjct: 418 LDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYS 477
Query: 278 SIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSK 337
++I G G+ ++A D M G PD AY+ + R+A+ L +M S
Sbjct: 478 ALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISD 537
Query: 338 GLNPNATTYNLFF 350
G P+ T Y L
Sbjct: 538 GHTPSYTLYELMI 550
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 101/238 (42%)
Query: 241 YNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMK 300
Y +++ Y K + +KA V+ +R+ +PD+ T+ S++ G ++AR + M
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 301 EYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQ 360
G P V + N + C+ RL E Y +V+E+ G + ++ L F + ++
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 361 SSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLF 420
+Y M G P + +I L K ++V A + +M E F + + +
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSML 934
Query: 421 DLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEALQNLTQKMAVFG 478
+ + + + + + E G +P ++ + ++ R E L Q+M G
Sbjct: 935 KMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLG 992
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 94/209 (44%), Gaps = 4/209 (1%)
Query: 154 RQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKH-QFRPNLQTFNIL 212
++TV+ ++R K+ + D +N L+ C+++ + + +++ P L T+ L
Sbjct: 944 KKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSL 1003
Query: 213 LSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDL 269
+S + K E AE F+++ G+ D Y++++ + KA K+L M+ +
Sbjct: 1004 ISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGI 1063
Query: 270 SPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYD 329
P + T ++ G P +A VL +K+ Y++ I + +K +
Sbjct: 1064 EPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIE 1123
Query: 330 LVDEMTSKGLNPNATTYNLFFRIFYWSND 358
+ EM +GL P+ + F R +S +
Sbjct: 1124 RLLEMKKEGLEPDHRIWTCFVRAASFSKE 1152
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 98/215 (45%), Gaps = 12/215 (5%)
Query: 95 KGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEAR----WKDQTLITPRTVMVVLARTAKV 150
KGFF A + +++LY R R + ++ + + KD+ +T T++ + + ++
Sbjct: 361 KGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDE--MTYNTIIHMYGKQGQL 418
Query: 151 CSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHS-LKHQFRPNLQTF 209
Q + + PD T + L+ +L + +A + L +P LQT+
Sbjct: 419 DLALQLYKDMKGLSGRNPDAIT--YTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTY 476
Query: 210 NILLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRE 266
+ L+ G+ E+AE F M G PD + Y+ ++DV +G E KA+ + +M
Sbjct: 477 SALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMIS 536
Query: 267 RDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKE 301
+P Y +I GL + D + +++M+E
Sbjct: 537 DGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEE 571
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 130/298 (43%), Gaps = 42/298 (14%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTPEDAEVF---F 226
D ++AL+ LC+E M A ++ + K PN F L+ G + ++ +
Sbjct: 309 DVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESY 368
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
+KM G+ PD+V YN+LV+ +CK +L A ++D M R L PD ITYT++I G
Sbjct: 369 QKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRG 428
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
G + A ++ KEM + G D ++A + C R+ +A + EM G+ P+ TY
Sbjct: 429 GDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTY 488
Query: 347 NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE 406
+ F D Q+ + + M G P+
Sbjct: 489 TMMMDAFCKKGDAQTGFKLLKEMQSDGHVPS----------------------------- 519
Query: 407 KGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRH 464
+ +VL + LC +G++ A+ M+ G P ++++ L+E +RH
Sbjct: 520 ------VVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITY---NTLLEGHHRH 568
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 124/257 (48%), Gaps = 3/257 (1%)
Query: 198 LKHQFRPNLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGREL 254
L F N+ FNIL++ + DA+ F ++ + + P VV++N+L++ YCK L
Sbjct: 232 LDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNL 291
Query: 255 EKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAA 314
++ +++ +M + PDV TY+++I L + D A + EM + G P+ +
Sbjct: 292 DEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTL 351
Query: 315 IRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGC 374
I + + +M SKGL P+ YN F + DL ++ N+ M+ G
Sbjct: 352 IHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGL 411
Query: 375 HPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEK 434
P+ + LI F + VE AL++ +M + G + L +C G++ +AE+
Sbjct: 412 RPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAER 471
Query: 435 CFLEMIEKGQKPSNVSF 451
EM+ G KP +V++
Sbjct: 472 ALREMLRAGIKPDDVTY 488
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 129/285 (45%), Gaps = 13/285 (4%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSLKH-QFRPNLQTFNILLSGWKTPEDAEVFF--- 226
D+ CF L+ + A + +K RP++ T+N++L + EVFF
Sbjct: 126 DSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVIL---RVMMREEVFFMLA 182
Query: 227 ----KKMREMGVTPDVVTYNSLVD-VYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIG 281
+M + +P++ T+ L+D +Y KGR A K+ D+M R +SP+ +TYT +I
Sbjct: 183 FAVYNEMLKCNCSPNLYTFGILMDGLYKKGRT-SDAQKMFDDMTGRGISPNRVTYTILIS 241
Query: 282 GLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNP 341
GL G D AR + EM+ G YPD A+NA + FC R+ EA++L+ G
Sbjct: 242 GLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVL 301
Query: 342 NATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLW 401
Y+ + + ++ +Y M+ P+ LI+ K K+E AL+L
Sbjct: 302 GLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLL 361
Query: 402 GDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKP 446
M KG T + + LC G L E LEM E P
Sbjct: 362 SSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFP 406
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 132/312 (42%), Gaps = 19/312 (6%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSG-WKTPEDAEVF--F 226
D+ NALL C+ M +A + K F L+ ++ L+ G ++ + F +
Sbjct: 267 DSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELY 326
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
M + + PD++ Y L+ K ++E A K+L M + +SPD Y ++I L
Sbjct: 327 ANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGR 386
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
G ++ R + EM E +PD + I + C +REA ++ E+ G +P+ T+
Sbjct: 387 GLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATF 446
Query: 347 NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFL------IRLFKKQEKVEMALQL 400
N S +L+ + + H+M + +FL R F + L+
Sbjct: 447 NALIDGLCKSGELKEARLLLHKM-----EVGRPASLFLRLSHSGNRSFDTMVESGSILKA 501
Query: 401 WGDM---VEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRR-IKV 456
+ D+ + G + +VL + C G + A K + KG P +V++ I
Sbjct: 502 YRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLING 561
Query: 457 LMELANRHEALQ 468
L + EA +
Sbjct: 562 LHRVGREEEAFK 573
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 118/290 (40%), Gaps = 43/290 (14%)
Query: 155 QTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHS-LKHQFRPNLQTFNILL 213
+ E R F+K +++L+ L + + T A +Y + LK +P++ + IL+
Sbjct: 286 EAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILI 345
Query: 214 SGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLS 270
G EDA M G++PD YN+++ C LE+ + EM E +
Sbjct: 346 QGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESF 405
Query: 271 PDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDL 330
PD T+T +I + G +A ++ E+++ GC P V +NA I C + L+EA L
Sbjct: 406 PDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLL 465
Query: 331 VDEM---------------------------------------TSKGLNPNATTYNLFFR 351
+ +M G +P+ +YN+
Sbjct: 466 LHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLIN 525
Query: 352 IFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLW 401
F + D+ + + + + G P++ + LI + + E A +L+
Sbjct: 526 GFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 100/199 (50%), Gaps = 18/199 (9%)
Query: 147 TAKVCS------VRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKH 200
T +CS VR+ E F +K FNAL+ LC+ + +AR + H ++
Sbjct: 412 TILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEV 471
Query: 201 QFRPNLQTFNILLSG---WKTPEDAEVFFKKMREM------GVTPDVVTYNSLVDVYCKG 251
RP + SG + T ++ K R++ G +PD+V+YN L++ +C+
Sbjct: 472 G-RPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRA 530
Query: 252 RELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAY 311
+++ A K+L+ ++ + LSPD +TY ++I GL VG+ ++A + ++ P V Y
Sbjct: 531 GDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAV--Y 588
Query: 312 NAAIRNFCIAKRLREAYDL 330
+ + C +++ A++L
Sbjct: 589 RSLMTWSCRKRKVLVAFNL 607
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 91/206 (44%), Gaps = 20/206 (9%)
Query: 233 GVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKA 292
G+ D+++ ++ D+Y ++ L+E++ +S D + +I +G +KA
Sbjct: 96 GLVIDMLSEDNGCDLY---------WQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKA 146
Query: 293 RDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLRE------AYDLVDEMTSKGLNPNATTY 346
+ MKE+ C PDV YN +R +RE A+ + +EM +PN T+
Sbjct: 147 VESFGRMKEFDCRPDVFTYNVILRVM-----MREEVFFMLAFAVYNEMLKCNCSPNLYTF 201
Query: 347 NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE 406
+ Y + M+ M G G PN + LI ++ + A +L+ +M
Sbjct: 202 GILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQT 261
Query: 407 KGFGSYTLVSDVLFDLLCDMGKLGEA 432
G ++ + L D C +G++ EA
Sbjct: 262 SGNYPDSVAHNALLDGFCKLGRMVEA 287
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 109/278 (39%), Gaps = 49/278 (17%)
Query: 216 WKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVIT 275
W+T E+ ++ GV+ D + L+ Y K EKA + M+E D PDV T
Sbjct: 112 WQTLEE-------LKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFT 164
Query: 276 YTSIIGGLGLVGQPDK----ARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLV 331
Y I L ++ + + A V EM + C P++ + + R +A +
Sbjct: 165 YNVI---LRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMF 221
Query: 332 DEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQS--------CMF 383
D+MT +G++PN TY + + +++ M G +P++ + C
Sbjct: 222 DDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKL 281
Query: 384 --------LIRLFKKQ-------------------EKVEMALQLWGDMVEKGFGSYTLVS 416
L+RLF+K + A +L+ +M++K ++
Sbjct: 282 GRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILY 341
Query: 417 DVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
+L L GK+ +A K M KG P + +
Sbjct: 342 TILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAV 379
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 161/345 (46%), Gaps = 10/345 (2%)
Query: 103 SLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRR 162
S D M+++LG + FN W L+ + + + T + + +++ R A Q + F
Sbjct: 157 SCDLMIWVLGNHQKFNIAWCLIRDMF--NVSKDTRKAMFLMMDRYAAANDTSQAIRTFDI 214
Query: 163 FKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSG----WKT 218
K F LL LC+ + A + K F +++ FN++L+G W
Sbjct: 215 MDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASKKLFPVDVEGFNVILNGWCNIWTD 274
Query: 219 PEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTS 278
+A+ +++M +TP+ +Y+ ++ + K L + ++ DEM++R L+P + Y S
Sbjct: 275 VTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNS 334
Query: 279 IIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKG 338
++ L D+A ++K++ E G PD YN+ IR C A +L A +++ M S+
Sbjct: 335 LVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISEN 394
Query: 339 LNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMAL 398
L+P T++ F + L+ M ++ LG P ++ + ++ K ++ E AL
Sbjct: 395 LSPTVDTFHAFLEAVNFEKTLEVLGQM--KISDLG--PTEETFLLILGKLFKGKQPENAL 450
Query: 399 QLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKG 443
++W +M + + L G L +A + + EM KG
Sbjct: 451 KIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKG 495
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 99/231 (42%), Gaps = 7/231 (3%)
Query: 244 LVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYG 303
++D Y + +A + D M + +P + ++ L G +KA + + K+
Sbjct: 195 MMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASKKL- 253
Query: 304 CYP-DVPAYNAAIRNFC-IAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQS 361
+P DV +N + +C I + EA + EM + + PN +Y+ F +L
Sbjct: 254 -FPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFD 312
Query: 362 SWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFD 421
S +Y M G P + L+ + +++ + A++L + E+G ++ + +
Sbjct: 313 SLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIR 372
Query: 422 LLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEALQNLTQ 472
LC+ GKL A MI + P+ +F +E N + L+ L Q
Sbjct: 373 PLCEAGKLDVARNVLATMISENLSPTVDTFH---AFLEAVNFEKTLEVLGQ 420
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 128/278 (46%), Gaps = 4/278 (1%)
Query: 178 LLRTLCQEKSMTDARNV-YHSLKHQFRPNLQTFNILLSGWKTPEDAEVFFKKMREM---G 233
L+ LC+ + A + + L F + +T N LL G + F+ +E+ G
Sbjct: 476 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
Query: 234 VTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKAR 293
D V+YN+L+ C ++L++A+ LDEM +R L PD TY+ +I GL + + ++A
Sbjct: 536 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI 595
Query: 294 DVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIF 353
+ K G PDV Y+ I C A+R E + DEM SK + PN YN R +
Sbjct: 596 QFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAY 655
Query: 354 YWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYT 413
S L + + M G PN+ + LI+ +VE A L+ +M +G
Sbjct: 656 CRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNV 715
Query: 414 LVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
L D +G++ + E EM K P+ +++
Sbjct: 716 FHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITY 753
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 141/319 (44%), Gaps = 41/319 (12%)
Query: 172 TNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTF----NILLSGWKTPEDAEVFFK 227
T C N LL +L + + + P++ F N G K E+A F
Sbjct: 227 TTC-NILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKV-EEAVKLFS 284
Query: 228 KMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVG 287
KM E GV P+VVT+N+++D ++A+ ++M ER + P +ITY+ ++ GL
Sbjct: 285 KMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAK 344
Query: 288 QPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYN 347
+ A VLKEM + G P+V YN I +F A L +A ++ D M SKGL+ ++TYN
Sbjct: 345 RIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYN 404
Query: 348 LFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQS-----CMF------------------- 383
+ + + ++ + M+ +G + N S C+
Sbjct: 405 TLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR 464
Query: 384 -----------LIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEA 432
LI K K AL+LW + KGF T S+ L LC+ GKL EA
Sbjct: 465 NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 524
Query: 433 EKCFLEMIEKGQKPSNVSF 451
+ E++ +G VS+
Sbjct: 525 FRIQKEILGRGCVMDRVSY 543
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 105/199 (52%), Gaps = 3/199 (1%)
Query: 204 PNLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKV 260
P++ T+++++ G + E+ + FF +M V P+ V YN L+ YC+ L A ++
Sbjct: 608 PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 667
Query: 261 LDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCI 320
++M+ + +SP+ TYTS+I G+ ++ + ++A+ + +EM+ G P+V Y A I +
Sbjct: 668 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK 727
Query: 321 AKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQS 380
++ + L+ EM SK ++PN TY + + ++ + + + M G P++ +
Sbjct: 728 LGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSIT 787
Query: 381 CMFLIRLFKKQEKVEMALQ 399
I + KQ V A +
Sbjct: 788 YKEFIYGYLKQGGVLEAFK 806
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 4/199 (2%)
Query: 139 TVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL 198
T V++ K + EFF +T +N L+R C+ ++ A + +
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671
Query: 199 KHQ-FRPNLQTFNILLSGWKT---PEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGREL 254
KH+ PN T+ L+ G E+A++ F++MR G+ P+V Y +L+D Y K ++
Sbjct: 672 KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQM 731
Query: 255 EKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAA 314
K +L EM +++ P+ ITYT +IGG G +A +L EM+E G PD Y
Sbjct: 732 VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEF 791
Query: 315 IRNFCIAKRLREAYDLVDE 333
I + + EA+ DE
Sbjct: 792 IYGYLKQGGVLEAFKGSDE 810
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 134/310 (43%), Gaps = 38/310 (12%)
Query: 207 QTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDE 263
T+N L+ G+ ++AE K+M +G + ++ S++ + C + A + + E
Sbjct: 401 STYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGE 460
Query: 264 MRERDLSPDVITYTSIIGGL-------------------GLV----------------GQ 288
M R++SP T++I GL G V G+
Sbjct: 461 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 520
Query: 289 PDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNL 348
D+A + KE+ GC D +YN I C K+L EA+ +DEM +GL P+ TY++
Sbjct: 521 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 580
Query: 349 FFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKG 408
+ N ++ + + G P+ + +I K E+ E + + +M+ K
Sbjct: 581 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 409 FGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEALQ 468
T+V + L C G+L A + +M KG P++ ++ + M + +R E +
Sbjct: 641 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 700
Query: 469 NLTQKMAVFG 478
L ++M + G
Sbjct: 701 LLFEEMRMEG 710
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 101/233 (43%), Gaps = 1/233 (0%)
Query: 226 FKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGL 285
F + G+ P T N L+ + E +K + D + + +SPDV +T+ I
Sbjct: 214 FPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVC-KGVSPDVYLFTTAINAFCK 272
Query: 286 VGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATT 345
G+ ++A + +M+E G P+V +N I + R EA+ ++M +G+ P T
Sbjct: 273 GGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLIT 332
Query: 346 YNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMV 405
Y++ + + + ++ + M G PN LI F + + A+++ MV
Sbjct: 333 YSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV 392
Query: 406 EKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLM 458
KG + + L C G+ AE+ EM+ G + SF + L+
Sbjct: 393 SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 445
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 128/278 (46%), Gaps = 4/278 (1%)
Query: 178 LLRTLCQEKSMTDARNV-YHSLKHQFRPNLQTFNILLSGWKTPEDAEVFFKKMREM---G 233
L+ LC+ + A + + L F + +T N LL G + F+ +E+ G
Sbjct: 476 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
Query: 234 VTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKAR 293
D V+YN+L+ C ++L++A+ LDEM +R L PD TY+ +I GL + + ++A
Sbjct: 536 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI 595
Query: 294 DVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIF 353
+ K G PDV Y+ I C A+R E + DEM SK + PN YN R +
Sbjct: 596 QFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAY 655
Query: 354 YWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYT 413
S L + + M G PN+ + LI+ +VE A L+ +M +G
Sbjct: 656 CRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNV 715
Query: 414 LVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
L D +G++ + E EM K P+ +++
Sbjct: 716 FHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITY 753
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 141/319 (44%), Gaps = 41/319 (12%)
Query: 172 TNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTF----NILLSGWKTPEDAEVFFK 227
T C N LL +L + + + P++ F N G K E+A F
Sbjct: 227 TTC-NILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKV-EEAVKLFS 284
Query: 228 KMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVG 287
KM E GV P+VVT+N+++D ++A+ ++M ER + P +ITY+ ++ GL
Sbjct: 285 KMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAK 344
Query: 288 QPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYN 347
+ A VLKEM + G P+V YN I +F A L +A ++ D M SKGL+ ++TYN
Sbjct: 345 RIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYN 404
Query: 348 LFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQS-----CMF------------------- 383
+ + + ++ + M+ +G + N S C+
Sbjct: 405 TLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR 464
Query: 384 -----------LIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEA 432
LI K K AL+LW + KGF T S+ L LC+ GKL EA
Sbjct: 465 NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 524
Query: 433 EKCFLEMIEKGQKPSNVSF 451
+ E++ +G VS+
Sbjct: 525 FRIQKEILGRGCVMDRVSY 543
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 105/199 (52%), Gaps = 3/199 (1%)
Query: 204 PNLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKV 260
P++ T+++++ G + E+ + FF +M V P+ V YN L+ YC+ L A ++
Sbjct: 608 PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 667
Query: 261 LDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCI 320
++M+ + +SP+ TYTS+I G+ ++ + ++A+ + +EM+ G P+V Y A I +
Sbjct: 668 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK 727
Query: 321 AKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQS 380
++ + L+ EM SK ++PN TY + + ++ + + + M G P++ +
Sbjct: 728 LGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSIT 787
Query: 381 CMFLIRLFKKQEKVEMALQ 399
I + KQ V A +
Sbjct: 788 YKEFIYGYLKQGGVLEAFK 806
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 4/199 (2%)
Query: 139 TVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL 198
T V++ K + EFF +T +N L+R C+ ++ A + +
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671
Query: 199 KHQ-FRPNLQTFNILLSGWKT---PEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGREL 254
KH+ PN T+ L+ G E+A++ F++MR G+ P+V Y +L+D Y K ++
Sbjct: 672 KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQM 731
Query: 255 EKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAA 314
K +L EM +++ P+ ITYT +IGG G +A +L EM+E G PD Y
Sbjct: 732 VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEF 791
Query: 315 IRNFCIAKRLREAYDLVDE 333
I + + EA+ DE
Sbjct: 792 IYGYLKQGGVLEAFKGSDE 810
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 134/310 (43%), Gaps = 38/310 (12%)
Query: 207 QTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDE 263
T+N L+ G+ ++AE K+M +G + ++ S++ + C + A + + E
Sbjct: 401 STYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGE 460
Query: 264 MRERDLSPDVITYTSIIGGL-------------------GLV----------------GQ 288
M R++SP T++I GL G V G+
Sbjct: 461 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 520
Query: 289 PDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNL 348
D+A + KE+ GC D +YN I C K+L EA+ +DEM +GL P+ TY++
Sbjct: 521 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 580
Query: 349 FFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKG 408
+ N ++ + + G P+ + +I K E+ E + + +M+ K
Sbjct: 581 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 409 FGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEALQ 468
T+V + L C G+L A + +M KG P++ ++ + M + +R E +
Sbjct: 641 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 700
Query: 469 NLTQKMAVFG 478
L ++M + G
Sbjct: 701 LLFEEMRMEG 710
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 101/233 (43%), Gaps = 1/233 (0%)
Query: 226 FKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGL 285
F + G+ P T N L+ + E +K + D + + +SPDV +T+ I
Sbjct: 214 FPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVC-KGVSPDVYLFTTAINAFCK 272
Query: 286 VGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATT 345
G+ ++A + +M+E G P+V +N I + R EA+ ++M +G+ P T
Sbjct: 273 GGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLIT 332
Query: 346 YNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMV 405
Y++ + + + ++ + M G PN LI F + + A+++ MV
Sbjct: 333 YSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV 392
Query: 406 EKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLM 458
KG + + L C G+ AE+ EM+ G + SF + L+
Sbjct: 393 SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 445
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 171/383 (44%), Gaps = 13/383 (3%)
Query: 85 LEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVL 144
++F+++ G+R+ F H + T++ L +R++ ++ + E ++P + ++
Sbjct: 110 IQFFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELV 169
Query: 145 ARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFR- 203
+ V + + F + K ++ +N+++ L QE VY + ++
Sbjct: 170 KALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDC 229
Query: 204 -PNLQTFNILLSGWKT---PEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYK 259
P+ T++ L+S ++ + A F +M++ + P Y +L+ +Y K ++EKA
Sbjct: 230 FPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALD 289
Query: 260 VLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFC 319
+ +EM+ SP V TYT +I GLG G+ D+A K+M G PDV N +
Sbjct: 290 LFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILG 349
Query: 320 IAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSN---DLQSSWNMYHRMMGLGCHP 376
R+ E ++ EM P +YN + + S SSW + +M P
Sbjct: 350 KVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSW--FDKMKADSVSP 407
Query: 377 NTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCF 436
+ + LI + K +VE AL L +M EKGF L + L + A + F
Sbjct: 408 SEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELF 467
Query: 437 LEMIEKGQKPSNVSFRRIKVLME 459
E+ E NVS R V+++
Sbjct: 468 KELKENF---GNVSSRVYAVMIK 487
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 127/289 (43%), Gaps = 5/289 (1%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSLKH-QFRPNLQTFNILLSGWKTPE----DAEVF 225
D N L+ L + + + NV+ + + P + ++N ++ + + +
Sbjct: 337 DVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSW 396
Query: 226 FKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGL 285
F KM+ V+P TY+ L+D YCK +EKA +L+EM E+ P Y S+I LG
Sbjct: 397 FDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGK 456
Query: 286 VGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATT 345
+ + A ++ KE+KE Y I++F +L EA DL +EM ++G P+
Sbjct: 457 AKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYA 516
Query: 346 YNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMV 405
YN + + + ++ +M GC + S ++ F + A++++ +
Sbjct: 517 YNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIK 576
Query: 406 EKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
G + + L G EA + EM +KG + +++ I
Sbjct: 577 HSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSI 625
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 100/204 (49%), Gaps = 8/204 (3%)
Query: 95 KGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVR 154
KGF + +++ LG+++ + +L E + ++ ++ R V++ K +
Sbjct: 438 KGFPPCPAAYCSLINALGKAKRYEAANELFKELK-ENFGNVSSRVYAVMIKHFGKCGKLS 496
Query: 155 QTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILL 213
+ V+ F K D +NAL+ + + + +A ++ ++ R ++ + NI+L
Sbjct: 497 EAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIIL 556
Query: 214 SGWK---TPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLS 270
+G+ P A F+ ++ G+ PD VTYN+L+ + E+A +++ EM+++
Sbjct: 557 NGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFE 616
Query: 271 PDVITYTSIIGGLGLVGQPDKARD 294
D ITY+SI L VG D +D
Sbjct: 617 YDAITYSSI---LDAVGNVDHEKD 637
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/162 (19%), Positives = 84/162 (51%), Gaps = 4/162 (2%)
Query: 158 EFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFR-PNLQTFNILLSGW 216
E F+ K+ + + + +++ + +++A ++++ +K+Q P++ +N L+SG
Sbjct: 465 ELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGM 524
Query: 217 KTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDV 273
+A +KM E G D+ ++N +++ + + +A ++ + ++ + PD
Sbjct: 525 VKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDG 584
Query: 274 ITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAI 315
+TY +++G G ++A +++EMK+ G D Y++ +
Sbjct: 585 VTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSIL 626
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 153/330 (46%), Gaps = 15/330 (4%)
Query: 136 TPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDAR-NV 194
+ + + VLA + + +F++ +++ N L++ LC+ DA +
Sbjct: 120 SQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKI 179
Query: 195 YHSL-KHQFRPNLQTFNILLSG---WKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCK 250
+ + K P+ T+ L+SG + ++A+ F +M E P VVTY SL++ C
Sbjct: 180 FLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCG 239
Query: 251 GRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPA 310
+ +++A + L+EM+ + + P+V TY+S++ GL G+ +A ++ + M GC P++
Sbjct: 240 SKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVT 299
Query: 311 YNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMM 370
Y I C ++++EA +L+D M +GL P+A Y F + + + N M+
Sbjct: 300 YTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMI 359
Query: 371 GLGCHPNTQSCMFLIRLFKKQEKV--------EMALQLWGDMVEKGFGSYTLVSDVLFDL 422
G PN + + I + E V A L+ M +G + L
Sbjct: 360 LGGITPNRLT--WNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKC 417
Query: 423 LCDMGKLGEAEKCFLEMIEKGQKPSNVSFR 452
LC G+ +A + E++ G PS +++
Sbjct: 418 LCKKGEFQKAVQLVDEIVTDGCIPSKGTWK 447
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 109/269 (40%), Gaps = 36/269 (13%)
Query: 219 PEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDL--------- 269
P D+ F KM++ P Y +++ + + +L A+K MRE L
Sbjct: 102 PFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNV 161
Query: 270 ---------------------------SPDVITYTSIIGGLGLVGQPDKARDVLKEMKEY 302
PD TY ++I GL G+ D+A+ + EM E
Sbjct: 162 LIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEK 221
Query: 303 GCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSS 362
C P V Y + I C +K + EA ++EM SKG+ PN TY+ +
Sbjct: 222 DCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQA 281
Query: 363 WNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDL 422
++ MM GC PN + LI K++K++ A++L M +G + +
Sbjct: 282 MELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISG 341
Query: 423 LCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
C + K EA EMI G P+ +++
Sbjct: 342 FCAISKFREAANFLDEMILGGITPNRLTW 370
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 119/280 (42%), Gaps = 47/280 (16%)
Query: 152 SVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFN 210
+V ++ F K D D+ + L+ LC+ + +A+ ++ + + P + T+
Sbjct: 172 TVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYT 231
Query: 211 ILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCK-GRELEKAYKVLDEMRE 266
L++G K ++A + ++M+ G+ P+V TY+SL+D CK GR L+ A ++ + M
Sbjct: 232 SLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQ-AMELFEMMMA 290
Query: 267 RDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLRE 326
R P+++TYT++I GL + +A ++L M G PD Y I FC + RE
Sbjct: 291 RGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFRE 350
Query: 327 AYDLVDEMT-----------------------------------------SKGLNPNATT 345
A + +DEM S+G++ T
Sbjct: 351 AANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVET 410
Query: 346 YNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLI 385
+ + Q + + ++ GC P+ + LI
Sbjct: 411 LESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 83/187 (44%), Gaps = 3/187 (1%)
Query: 269 LSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAY 328
+S D++ SI G G V +P + V +MK++ C P AY + +L A+
Sbjct: 84 VSEDILL--SICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAF 141
Query: 329 DLVDEMTSKGLNPNATTYNLFFRIFYWSND-LQSSWNMYHRMMGLGCHPNTQSCMFLIRL 387
M GL P + N+ + ++ + + ++ M GC P++ + LI
Sbjct: 142 KFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISG 201
Query: 388 FKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPS 447
+ +++ A +L+ +MVEK + L + LC + EA + EM KG +P+
Sbjct: 202 LCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPN 261
Query: 448 NVSFRRI 454
++ +
Sbjct: 262 VFTYSSL 268
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 176/387 (45%), Gaps = 32/387 (8%)
Query: 73 RVRFSHANPSQTLEFYRYTGRRKGFF--HTAFSLDTMLYILGRSRMFNHIWDLLIEARWK 130
R+R H + L+F ++ ++ G H + +IL R+RM++ +L K
Sbjct: 84 RLRLVHGKLA--LKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHIL-----K 136
Query: 131 DQTLITPRTVMV--VLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSM 188
+ +L++ ++ V L T ++C+ +V ++ L+R +E +
Sbjct: 137 ELSLMSGKSSFVFGALMTTYRLCNSNPSV-----------------YDILIRVYLREGMI 179
Query: 189 TDARNVYHSLK-HQFRPNLQTFN-ILLSGWKTPEDAEV--FFKKMREMGVTPDVVTYNSL 244
D+ ++ + + F P++ T N IL S K+ ED V F K+M + + PDV T+N L
Sbjct: 180 QDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNIL 239
Query: 245 VDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGC 304
++V C EK+ ++ +M + +P ++TY +++ G+ A ++L MK G
Sbjct: 240 INVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGV 299
Query: 305 YPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWN 364
DV YN I + C + R+ + Y L+ +M + ++PN TYN F + +
Sbjct: 300 DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQ 359
Query: 365 MYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLC 424
+ + M+ G PN + LI + + AL+++ M KG + VL D LC
Sbjct: 360 LLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLC 419
Query: 425 DMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+ A ++ M G +++
Sbjct: 420 KNAEFDLARGFYMRMKRNGVCVGRITY 446
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 143/323 (44%), Gaps = 7/323 (2%)
Query: 133 TLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDAR 192
T++T TV+ + + + +E K D D +N L+ LC+ +
Sbjct: 267 TIVTYNTVLHWYCKKGRF---KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGY 323
Query: 193 NVYHSL-KHQFRPNLQTFNILLSGWKTPEDAEVFFKKMREM---GVTPDVVTYNSLVDVY 248
+ + K PN T+N L++G+ + + + EM G++P+ VT+N+L+D +
Sbjct: 324 LLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGH 383
Query: 249 CKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDV 308
++A K+ M + L+P ++Y ++ GL + D AR MK G
Sbjct: 384 ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 443
Query: 309 PAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHR 368
Y I C L EA L++EM+ G++P+ TY+ F +++ + R
Sbjct: 444 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 503
Query: 369 MMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGK 428
+ +G PN LI + ++ A++++ M+ +G +VL LC GK
Sbjct: 504 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 563
Query: 429 LGEAEKCFLEMIEKGQKPSNVSF 451
+ EAE+ M G P+ VSF
Sbjct: 564 VAEAEEFMRCMTSDGILPNTVSF 586
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 191/442 (43%), Gaps = 25/442 (5%)
Query: 51 LRQSLKSSG----VFLSNELIDQVLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDT 106
L Q ++ SG + N ++ K+ RF A +E + + KG + +
Sbjct: 255 LMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAA-----IELLDHM-KSKGVDADVCTYNM 308
Query: 107 MLYILGRSRMFNHIWDLL--IEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFK 164
+++ L RS + LL + R +T T++ + KV Q + F
Sbjct: 309 LIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFG 368
Query: 165 KLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKTPED-- 221
L P+ T FNAL+ E + +A +++ ++ + P+ ++ +LL G +
Sbjct: 369 -LSPNHVT--FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFD 425
Query: 222 -AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSII 280
A F+ +M+ GV +TY ++D CK L++A +L+EM + + PD++TY+++I
Sbjct: 426 LARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALI 485
Query: 281 GGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLN 340
G VG+ A++++ + G P+ Y+ I N C L+EA + + M +G
Sbjct: 486 NGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHT 545
Query: 341 PNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQL 400
+ T+N+ + + + M G PNT S LI + + A +
Sbjct: 546 RDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSV 605
Query: 401 WGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMEL 460
+ +M + G L LC G L EAEK FL+ + P+ V L+
Sbjct: 606 FDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEK-FLKSLH--AVPAAVDTVMYNTLLTA 662
Query: 461 ANRHEALQNLTQKMAVFGRPVQ 482
+ NL + +++FG VQ
Sbjct: 663 MCKS---GNLAKAVSLFGEMVQ 681
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 165/419 (39%), Gaps = 69/419 (16%)
Query: 123 LLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKK--LVPDFDTNCFNALLR 180
+++E +D T V++ K V + EF R ++P+ T F+ L+
Sbjct: 539 MILEGHTRDHF-----TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPN--TVSFDCLIN 591
Query: 181 TLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTP---EDAEVFFKKMREMGVTP 236
A +V+ + K P T+ LL G +AE F K + +
Sbjct: 592 GYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAV 651
Query: 237 DVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLG---------LVG 287
D V YN+L+ CK L KA + EM +R + PD TYTS+I GL L
Sbjct: 652 DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFA 711
Query: 288 QPDKAR-DVLKEMKEYGCY--------------------------PDVPAYNAAIRNFCI 320
+ +AR +VL Y C+ PD+ NA I +
Sbjct: 712 KEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSR 771
Query: 321 AKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQS 380
++ + DL+ EM ++ PN TTYN+ + D+ +S+ +Y ++ G P+ +
Sbjct: 772 MGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLT 831
Query: 381 CMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMI 440
C L+ + +E+ L++ + +G ++L C G++
Sbjct: 832 CHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEI----------- 880
Query: 441 EKGQKPSNVSFRRIKVLMELANRHEALQNLTQKMAVFGRPVQVRESRPVQVHESRESAI 499
N +F +KV+ L + ++V R + +ESR V +HE + I
Sbjct: 881 -------NWAFDLVKVMTSLGISLDK-DTCDAMVSVLNRNHRFQESRMV-LHEMSKQGI 930
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 8/178 (4%)
Query: 175 FNALLRTLCQEKSMTDARNVYHS--LKHQFRPNLQTFNILLS----GWKTPEDAEVFFKK 228
++ L+ C+ + +A +Y + L+ R + TFN+L++ K E AE F +
Sbjct: 516 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHF-TFNVLVTSLCKAGKVAE-AEEFMRC 573
Query: 229 MREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQ 288
M G+ P+ V+++ L++ Y E KA+ V DEM + P TY S++ GL G
Sbjct: 574 MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 633
Query: 289 PDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
+A LK + D YN + C + L +A L EM + + P++ TY
Sbjct: 634 LREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 691
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 108/252 (42%), Gaps = 5/252 (1%)
Query: 204 PNLQTFNILLSGWKTPEDAEVFFKKMREM---GVTPDVVTYNSLVDVYCKGRELEKAYKV 260
PNL T+NILL G+ +D F R + G+ PD +T +SLV C+ LE K+
Sbjct: 792 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 851
Query: 261 LDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCI 320
L R + D T+ +I G+ + A D++K M G D +A +
Sbjct: 852 LKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNR 911
Query: 321 AKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLG-CHPNTQ 379
R +E+ ++ EM+ +G++P + Y D+++++ + M+ C PN
Sbjct: 912 NHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVA 971
Query: 380 SCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEM 439
++R K K + A L M++ L L C G + EA + + M
Sbjct: 972 ESA-MVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVM 1030
Query: 440 IEKGQKPSNVSF 451
G K VS+
Sbjct: 1031 SNCGLKLDLVSY 1042
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 139/320 (43%), Gaps = 28/320 (8%)
Query: 159 FFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWK 217
F+ R K+ + ++ LC+ + +A + + + K P++ T++ L++G+
Sbjct: 430 FYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFC 489
Query: 218 TP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVI 274
+ A+ ++ +G++P+ + Y++L+ C+ L++A ++ + M + D
Sbjct: 490 KVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHF 549
Query: 275 TYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEM 334
T+ ++ L G+ +A + ++ M G P+ +++ I + + +A+ + DEM
Sbjct: 550 TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 609
Query: 335 TSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKV 394
T G +P TY + L+ + + + +T L+ K +
Sbjct: 610 TKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNL 669
Query: 395 EMALQLWGDMVEKGF--GSYTLVSDVLFDLLCDMGK-------LGEAEK----------- 434
A+ L+G+MV++ SYT S L LC GK EAE
Sbjct: 670 AKAVSLFGEMVQRSILPDSYTYTS--LISGLCRKGKTVIAILFAKEAEARGNVLPNKVMY 727
Query: 435 -CFLE-MIEKGQKPSNVSFR 452
CF++ M + GQ + + FR
Sbjct: 728 TCFVDGMFKAGQWKAGIYFR 747
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 91/191 (47%), Gaps = 1/191 (0%)
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
+++ + +M + G++P+ Y L++ C+ +++ A+ V +EM + P + +++
Sbjct: 916 QESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAM 975
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
+ L G+ D+A +L+ M + P + ++ + C + EA +L M++ GL
Sbjct: 976 VRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGL 1035
Query: 340 NPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIR-LFKKQEKVEMAL 398
+ +YN+ D+ ++ +Y M G G N + LIR L ++ A
Sbjct: 1036 KLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGAD 1095
Query: 399 QLWGDMVEKGF 409
+ D++ +GF
Sbjct: 1096 IILKDLLARGF 1106
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 143/321 (44%), Gaps = 40/321 (12%)
Query: 174 CFNALLRTLCQEKSMTDARNVYHSLK-HQFRPNLQTFNILLS----GWKTPEDAEVFFKK 228
F+AL+ + +A +V++S+K + RPNL T+N ++ G + FF +
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDE 329
Query: 229 MREMGVTPDVVT-----------------------------------YNSLVDVYCKGRE 253
M+ GV PD +T YN+L+D CKG +
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 254 LEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNA 313
++ A+++L +M + + P+V++Y+++I G G+ D+A ++ EM+ G D +YN
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 314 AIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLG 373
+ + R EA D++ EM S G+ + TYN + ++ M
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509
Query: 374 CHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAE 433
PN + LI + K + A++++ + G + ++ L D LC G +G A
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAV 569
Query: 434 KCFLEMIEKGQKPSNVSFRRI 454
EM ++G P+ V++ I
Sbjct: 570 SLIDEMTKEGISPNVVTYNSI 590
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 142/354 (40%), Gaps = 61/354 (17%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSLK-HQFRPNLQTFNILLSGWKTP---EDAEVFF 226
D +N LL +C+ M A + + + PN+ +++ ++ G+ ++A F
Sbjct: 373 DVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLF 432
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
+MR +G+ D V+YN+L+ +Y K E+A +L EM + DV+TY +++GG G
Sbjct: 433 GEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQ 492
Query: 287 GQPDKARDVLKEMKEYGCYP-----------------------------------DVPAY 311
G+ D+ + V EMK P DV Y
Sbjct: 493 GKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLY 552
Query: 312 NAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMG 371
+A I C + A L+DEMT +G++PN TYN F S + S +
Sbjct: 553 SALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD------- 605
Query: 372 LGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGE 431
+ N S F + E G+ V + FG T S+ C+ G +
Sbjct: 606 ---YSNGGSLPFSSSALSALTETE------GNRVIQLFGQLTTESNNRTTKDCEEGM--Q 654
Query: 432 AEKCFLEMIEKGQ----KPSNVSFRRIKVLMELANRHEALQNLTQKMAVFGRPV 481
C LE+ K KP+ V+F I N E L +++ +F V
Sbjct: 655 ELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKV 708
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 101/254 (39%), Gaps = 36/254 (14%)
Query: 222 AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIG 281
A+ F+ G V +++L+ Y + E+A V + M+E L P+++TY ++I
Sbjct: 252 AKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVID 311
Query: 282 GLGLVG------------------QPDK------------------ARDVLKEMKEYGCY 305
G G QPD+ AR++ EM
Sbjct: 312 ACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIE 371
Query: 306 PDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNM 365
DV +YN + C ++ A++++ +M K + PN +Y+ F + + N+
Sbjct: 372 QDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNL 431
Query: 366 YHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCD 425
+ M LG + S L+ ++ K + E AL + +M G + + L
Sbjct: 432 FGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGK 491
Query: 426 MGKLGEAEKCFLEM 439
GK E +K F EM
Sbjct: 492 QGKYDEVKKVFTEM 505
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 85/208 (40%), Gaps = 3/208 (1%)
Query: 273 VITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCI--AKRLREAYDL 330
V ++++I G G ++A V MKEYG P++ YNA I + C ++
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVI-DACGKGGMEFKQVAKF 326
Query: 331 VDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKK 390
DEM G+ P+ T+N + +++ N++ M + S L+ K
Sbjct: 327 FDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICK 386
Query: 391 QEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVS 450
++++A ++ M K + + D G+ EA F EM G VS
Sbjct: 387 GGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVS 446
Query: 451 FRRIKVLMELANRHEALQNLTQKMAVFG 478
+ + + R E ++ ++MA G
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVG 474
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 155/338 (45%), Gaps = 11/338 (3%)
Query: 53 QSLKSSGVFLSNELIDQVLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILG 112
++L + G + +QVLK++ N + L F+ + R+ GF H + TM+ LG
Sbjct: 315 EALHNFGFRMDAYQANQVLKQMD----NYANALGFFYWLKRQPGFKHDGHTYTTMVGNLG 370
Query: 113 RSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDT 172
R++ F I LL E +D T ++ + +++ + F + ++ + D
Sbjct: 371 RAKQFGEINKLLDEMV-RDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDR 429
Query: 173 NCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLS----GWKTPEDAEVFFK 227
+ L+ + + A ++Y ++ P+ T++++++ P A F
Sbjct: 430 VTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPA-AHRLFC 488
Query: 228 KMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVG 287
+M G TP++VT+N ++ ++ K R E A K+ +M+ PD +TY+ ++ LG G
Sbjct: 489 EMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCG 548
Query: 288 QPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYN 347
++A V EM+ PD P Y + + A + +A+ M GL PN T N
Sbjct: 549 FLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCN 608
Query: 348 LFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLI 385
F + + ++N+ M+ LG HP+ Q+ L+
Sbjct: 609 SLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 141/331 (42%), Gaps = 7/331 (2%)
Query: 159 FFRRFKKLVPDF--DTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSG 215
FF K+ P F D + + ++ L + K + + + + +PN T+N L+
Sbjct: 345 FFYWLKRQ-PGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHS 403
Query: 216 WKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPD 272
+ ++A F +M+E G PD VTY +L+D++ K L+ A + M+E LSPD
Sbjct: 404 YGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPD 463
Query: 273 VITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVD 332
TY+ II LG G A + EM GC P++ +N I A+ A L
Sbjct: 464 TFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYR 523
Query: 333 EMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQE 392
+M + G P+ TY++ + L+ + ++ M P+ L+ L+ K
Sbjct: 524 DMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAG 583
Query: 393 KVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFR 452
V+ A Q + M++ G + L + ++ EA M+ G PS ++
Sbjct: 584 NVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYT 643
Query: 453 RIKVLMELANRHEALQNLTQKMAVFGRPVQV 483
+ A + + Q MAV G P +
Sbjct: 644 LLLSCCTDARSNFDMGFCGQLMAVSGHPAHM 674
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 151/359 (42%), Gaps = 18/359 (5%)
Query: 135 ITPRTVMVVLARTAKVCSVRQTVEFFRRFK------KLVPDF----DTNCFNALLRTLCQ 184
+TPRT V RRFK + + +F D N +L+ Q
Sbjct: 279 VTPRTAPTPRQHCNPGYVVENVSSILRRFKWGHAAEEALHNFGFRMDAYQANQVLK---Q 335
Query: 185 EKSMTDARNVYHSLKHQ--FRPNLQTFNILLSGWKTPEDAEVFFKKMREM---GVTPDVV 239
+ +A ++ LK Q F+ + T+ ++ + K + EM G P+ V
Sbjct: 336 MDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTV 395
Query: 240 TYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEM 299
TYN L+ Y + L++A V ++M+E PD +TY ++I G D A D+ + M
Sbjct: 396 TYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRM 455
Query: 300 KEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDL 359
+E G PD Y+ I A L A+ L EM +G PN T+N+ + + +
Sbjct: 456 QEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNY 515
Query: 360 QSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVL 419
+++ +Y M G P+ + ++ + +E A ++ +M K + V +L
Sbjct: 516 ETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLL 575
Query: 420 FDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEALQNLTQKMAVFG 478
DL G + +A + + M++ G +P+ + + +R NL Q M G
Sbjct: 576 VDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALG 634
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 155/338 (45%), Gaps = 11/338 (3%)
Query: 53 QSLKSSGVFLSNELIDQVLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILG 112
++L++ G+ + +QVLK++ + L F+ + R+ GF H + TM+ LG
Sbjct: 320 EALQNLGLRIDAYQANQVLKQMN----DYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLG 375
Query: 113 RSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDT 172
R++ F I LL E +D T ++ + + + + F + ++ D
Sbjct: 376 RAKQFGAINKLLDEMV-RDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDR 434
Query: 173 NCFNALLRTLCQEKSMTDARNVYHSLK-HQFRPNLQTFNILLS----GWKTPEDAEVFFK 227
+ L+ + + A ++Y ++ P+ T++++++ P A F
Sbjct: 435 VTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPA-AHKLFC 493
Query: 228 KMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVG 287
+M + G TP++VTYN ++D++ K R + A K+ +M+ PD +TY+ ++ LG G
Sbjct: 494 EMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 553
Query: 288 QPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYN 347
++A V EM++ PD P Y + + A + +A+ M GL PN T N
Sbjct: 554 YLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCN 613
Query: 348 LFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLI 385
F N + ++ + M+ LG P+ Q+ L+
Sbjct: 614 SLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 111/248 (44%), Gaps = 3/248 (1%)
Query: 203 RPNLQTFNILLSGWKTPE---DAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYK 259
+PN T+N L+ + +A F +M+E G PD VTY +L+D++ K L+ A
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 260 VLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFC 319
+ M+ LSPD TY+ II LG G A + EM + GC P++ YN +
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 320 IAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQ 379
A+ + A L +M + G P+ TY++ + L+ + ++ M P+
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 380 SCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEM 439
L+ L+ K VE A Q + M+ G + L + K+ EA + M
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Query: 440 IEKGQKPS 447
+ G +PS
Sbjct: 636 LALGLRPS 643
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 103/222 (46%)
Query: 225 FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLG 284
F+ R+ G D TY ++V + ++ K+LDEM P+ +TY +I G
Sbjct: 351 FYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYG 410
Query: 285 LVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNAT 344
++A +V +M+E GC PD Y I A L A D+ M + GL+P+
Sbjct: 411 RANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTF 470
Query: 345 TYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDM 404
TY++ + L ++ ++ M+ GC PN + ++ L K + AL+L+ DM
Sbjct: 471 TYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM 530
Query: 405 VEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKP 446
GF + ++ ++L G L EAE F EM +K P
Sbjct: 531 QNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 135/301 (44%), Gaps = 20/301 (6%)
Query: 186 KSMTDARNV---YHSLKHQ--FRPNLQTFNILLSGWKTPEDAEVFFKKMREM---GVTPD 237
K M D N ++ LK Q F+ + T+ ++ + K + EM G P+
Sbjct: 339 KQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPN 398
Query: 238 VVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLK 297
VTYN L+ Y + L +A V ++M+E PD +TY ++I G D A D+ +
Sbjct: 399 TVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQ 458
Query: 298 EMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSN 357
M+ G PD Y+ I A L A+ L EM +G PN TYN+ + +
Sbjct: 459 RMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKAR 518
Query: 358 DLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSD 417
+ Q++ +Y M G P+ + ++ + +E A ++ +M +K + V
Sbjct: 519 NYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYG 578
Query: 418 VLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNV--------SFRRIKVLMELANRHEALQN 469
+L DL G + +A + + M+ G +P NV +F R+ ++A +E LQN
Sbjct: 579 LLVDLWGKAGNVEKAWQWYQAMLHAGLRP-NVPTCNSLLSTFLRVN---KIAEAYELLQN 634
Query: 470 L 470
+
Sbjct: 635 M 635
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 100/237 (42%), Gaps = 24/237 (10%)
Query: 248 YCK-GRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCY- 305
YC G +E VL R + + + LGL +A VLK+M +YG
Sbjct: 295 YCNSGHIVENVSSVLRRFRWGPAAEEALQ------NLGLRIDAYQANQVLKQMNDYGNAL 348
Query: 306 -------------PDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRI 352
D Y + N AK+ L+DEM G PN TYN
Sbjct: 349 GFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHS 408
Query: 353 FYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSY 412
+ +N L + N++++M GC P+ + LI + K +++A+ ++ M G
Sbjct: 409 YGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPD 468
Query: 413 TLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEALQN 469
T V+ + L G L A K F EM+++G P+ V++ ++M+L + QN
Sbjct: 469 TFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTY---NIMMDLHAKARNYQN 522
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 155/338 (45%), Gaps = 11/338 (3%)
Query: 53 QSLKSSGVFLSNELIDQVLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILG 112
++L++ G+ + +QVLK++ + L F+ + R+ GF H + TM+ LG
Sbjct: 320 EALQNLGLRIDAYQANQVLKQMN----DYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLG 375
Query: 113 RSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDT 172
R++ F I LL E +D T ++ + + + + F + ++ D
Sbjct: 376 RAKQFGAINKLLDEMV-RDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDR 434
Query: 173 NCFNALLRTLCQEKSMTDARNVYHSLK-HQFRPNLQTFNILLS----GWKTPEDAEVFFK 227
+ L+ + + A ++Y ++ P+ T++++++ P A F
Sbjct: 435 VTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPA-AHKLFC 493
Query: 228 KMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVG 287
+M + G TP++VTYN ++D++ K R + A K+ +M+ PD +TY+ ++ LG G
Sbjct: 494 EMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 553
Query: 288 QPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYN 347
++A V EM++ PD P Y + + A + +A+ M GL PN T N
Sbjct: 554 YLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCN 613
Query: 348 LFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLI 385
F N + ++ + M+ LG P+ Q+ L+
Sbjct: 614 SLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 111/248 (44%), Gaps = 3/248 (1%)
Query: 203 RPNLQTFNILLSGWKTPE---DAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYK 259
+PN T+N L+ + +A F +M+E G PD VTY +L+D++ K L+ A
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 260 VLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFC 319
+ M+ LSPD TY+ II LG G A + EM + GC P++ YN +
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 320 IAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQ 379
A+ + A L +M + G P+ TY++ + L+ + ++ M P+
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 380 SCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEM 439
L+ L+ K VE A Q + M+ G + L + K+ EA + M
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Query: 440 IEKGQKPS 447
+ G +PS
Sbjct: 636 LALGLRPS 643
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 103/222 (46%)
Query: 225 FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLG 284
F+ R+ G D TY ++V + ++ K+LDEM P+ +TY +I G
Sbjct: 351 FYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYG 410
Query: 285 LVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNAT 344
++A +V +M+E GC PD Y I A L A D+ M + GL+P+
Sbjct: 411 RANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTF 470
Query: 345 TYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDM 404
TY++ + L ++ ++ M+ GC PN + ++ L K + AL+L+ DM
Sbjct: 471 TYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM 530
Query: 405 VEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKP 446
GF + ++ ++L G L EAE F EM +K P
Sbjct: 531 QNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 135/301 (44%), Gaps = 20/301 (6%)
Query: 186 KSMTDARNV---YHSLKHQ--FRPNLQTFNILLSGWKTPEDAEVFFKKMREM---GVTPD 237
K M D N ++ LK Q F+ + T+ ++ + K + EM G P+
Sbjct: 339 KQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPN 398
Query: 238 VVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLK 297
VTYN L+ Y + L +A V ++M+E PD +TY ++I G D A D+ +
Sbjct: 399 TVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQ 458
Query: 298 EMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSN 357
M+ G PD Y+ I A L A+ L EM +G PN TYN+ + +
Sbjct: 459 RMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKAR 518
Query: 358 DLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSD 417
+ Q++ +Y M G P+ + ++ + +E A ++ +M +K + V
Sbjct: 519 NYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYG 578
Query: 418 VLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNV--------SFRRIKVLMELANRHEALQN 469
+L DL G + +A + + M+ G +P NV +F R+ ++A +E LQN
Sbjct: 579 LLVDLWGKAGNVEKAWQWYQAMLHAGLRP-NVPTCNSLLSTFLRVN---KIAEAYELLQN 634
Query: 470 L 470
+
Sbjct: 635 M 635
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 100/237 (42%), Gaps = 24/237 (10%)
Query: 248 YCK-GRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCY- 305
YC G +E VL R + + + LGL +A VLK+M +YG
Sbjct: 295 YCNSGHIVENVSSVLRRFRWGPAAEEALQ------NLGLRIDAYQANQVLKQMNDYGNAL 348
Query: 306 -------------PDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRI 352
D Y + N AK+ L+DEM G PN TYN
Sbjct: 349 GFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHS 408
Query: 353 FYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSY 412
+ +N L + N++++M GC P+ + LI + K +++A+ ++ M G
Sbjct: 409 YGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPD 468
Query: 413 TLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEALQN 469
T V+ + L G L A K F EM+++G P+ V++ ++M+L + QN
Sbjct: 469 TFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTY---NIMMDLHAKARNYQN 522
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 155/338 (45%), Gaps = 11/338 (3%)
Query: 53 QSLKSSGVFLSNELIDQVLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILG 112
++L++ G+ + +QVLK++ + L F+ + R+ GF H + TM+ LG
Sbjct: 320 EALQNLGLRIDAYQANQVLKQMN----DYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLG 375
Query: 113 RSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDT 172
R++ F I LL E +D T ++ + + + + F + ++ D
Sbjct: 376 RAKQFGAINKLLDEMV-RDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDR 434
Query: 173 NCFNALLRTLCQEKSMTDARNVYHSLK-HQFRPNLQTFNILLS----GWKTPEDAEVFFK 227
+ L+ + + A ++Y ++ P+ T++++++ P A F
Sbjct: 435 VTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPA-AHKLFC 493
Query: 228 KMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVG 287
+M + G TP++VTYN ++D++ K R + A K+ +M+ PD +TY+ ++ LG G
Sbjct: 494 EMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 553
Query: 288 QPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYN 347
++A V EM++ PD P Y + + A + +A+ M GL PN T N
Sbjct: 554 YLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCN 613
Query: 348 LFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLI 385
F N + ++ + M+ LG P+ Q+ L+
Sbjct: 614 SLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 111/248 (44%), Gaps = 3/248 (1%)
Query: 203 RPNLQTFNILLSGWKTPE---DAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYK 259
+PN T+N L+ + +A F +M+E G PD VTY +L+D++ K L+ A
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 260 VLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFC 319
+ M+ LSPD TY+ II LG G A + EM + GC P++ YN +
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 320 IAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQ 379
A+ + A L +M + G P+ TY++ + L+ + ++ M P+
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 380 SCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEM 439
L+ L+ K VE A Q + M+ G + L + K+ EA + M
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Query: 440 IEKGQKPS 447
+ G +PS
Sbjct: 636 LALGLRPS 643
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 103/222 (46%)
Query: 225 FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLG 284
F+ R+ G D TY ++V + ++ K+LDEM P+ +TY +I G
Sbjct: 351 FYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYG 410
Query: 285 LVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNAT 344
++A +V +M+E GC PD Y I A L A D+ M + GL+P+
Sbjct: 411 RANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTF 470
Query: 345 TYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDM 404
TY++ + L ++ ++ M+ GC PN + ++ L K + AL+L+ DM
Sbjct: 471 TYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM 530
Query: 405 VEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKP 446
GF + ++ ++L G L EAE F EM +K P
Sbjct: 531 QNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 135/301 (44%), Gaps = 20/301 (6%)
Query: 186 KSMTDARNV---YHSLKHQ--FRPNLQTFNILLSGWKTPEDAEVFFKKMREM---GVTPD 237
K M D N ++ LK Q F+ + T+ ++ + K + EM G P+
Sbjct: 339 KQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPN 398
Query: 238 VVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLK 297
VTYN L+ Y + L +A V ++M+E PD +TY ++I G D A D+ +
Sbjct: 399 TVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQ 458
Query: 298 EMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSN 357
M+ G PD Y+ I A L A+ L EM +G PN TYN+ + +
Sbjct: 459 RMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKAR 518
Query: 358 DLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSD 417
+ Q++ +Y M G P+ + ++ + +E A ++ +M +K + V
Sbjct: 519 NYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYG 578
Query: 418 VLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNV--------SFRRIKVLMELANRHEALQN 469
+L DL G + +A + + M+ G +P NV +F R+ ++A +E LQN
Sbjct: 579 LLVDLWGKAGNVEKAWQWYQAMLHAGLRP-NVPTCNSLLSTFLRVN---KIAEAYELLQN 634
Query: 470 L 470
+
Sbjct: 635 M 635
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 100/237 (42%), Gaps = 24/237 (10%)
Query: 248 YCK-GRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCY- 305
YC G +E VL R + + + LGL +A VLK+M +YG
Sbjct: 295 YCNSGHIVENVSSVLRRFRWGPAAEEALQ------NLGLRIDAYQANQVLKQMNDYGNAL 348
Query: 306 -------------PDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRI 352
D Y + N AK+ L+DEM G PN TYN
Sbjct: 349 GFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHS 408
Query: 353 FYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSY 412
+ +N L + N++++M GC P+ + LI + K +++A+ ++ M G
Sbjct: 409 YGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPD 468
Query: 413 TLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEALQN 469
T V+ + L G L A K F EM+++G P+ V++ ++M+L + QN
Sbjct: 469 TFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTY---NIMMDLHAKARNYQN 522
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 145/353 (41%), Gaps = 33/353 (9%)
Query: 100 TAFSLDTMLYILGR-SRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVE 158
T + + +L + G+ R + I +L E R K T VL+ A+ +R+ E
Sbjct: 244 TLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKF-DEFTCSTVLSACAREGLLREAKE 302
Query: 159 FFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKT 218
FF K + T +NALL+ + T+A +V
Sbjct: 303 FFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSV------------------------ 338
Query: 219 PEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTS 278
K+M E D VTYN LV Y + ++A V++ M ++ + P+ ITYT+
Sbjct: 339 -------LKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTT 391
Query: 279 IIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKG 338
+I G G+ D+A + MKE GC P+ YNA + R E ++ +M S G
Sbjct: 392 VIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNG 451
Query: 339 LNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMAL 398
+PN T+N + + ++ M G P+ + LI + + A
Sbjct: 452 CSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDAS 511
Query: 399 QLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+++G+M GF + + L + L G E +M KG KP+ S+
Sbjct: 512 KMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSY 564
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 114/268 (42%), Gaps = 36/268 (13%)
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCK-GRELEKAYKVLDEMRERDL--------- 269
E A F++M+EMG +P +VTYN ++DV+ K GR K VLDEMR + L
Sbjct: 227 EKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCST 286
Query: 270 --------------------------SPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYG 303
P +TY +++ G G +A VLKEM+E
Sbjct: 287 VLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENS 346
Query: 304 CYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSW 363
C D YN + + A +EA +++ MT KG+ PNA TY + + +
Sbjct: 347 CPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEAL 406
Query: 364 NMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLL 423
+++ M GC PNT + ++ L K+ + +++ DM G + + L
Sbjct: 407 KLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALC 466
Query: 424 CDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+ G + F EM G +P +F
Sbjct: 467 GNKGMDKFVNRVFREMKSCGFEPDRDTF 494
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 82/153 (53%), Gaps = 3/153 (1%)
Query: 199 KHQFRPNLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELE 255
KH ++P++ FN +LS + + AE + +RE G++PD+VTYNSL+D+Y + E
Sbjct: 624 KHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECW 683
Query: 256 KAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAI 315
KA ++L + + L PD+++Y ++I G G +A +L EM E G P + YN +
Sbjct: 684 KAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFV 743
Query: 316 RNFCIAKRLREAYDLVDEMTSKGLNPNATTYNL 348
+ E D+++ M PN T+ +
Sbjct: 744 SGYTAMGMFAEIEDVIECMAKNDCRPNELTFKM 776
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 109/242 (45%), Gaps = 39/242 (16%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKTP-------------E 220
+NALL L ++ NV +K + F+P +++++L + +
Sbjct: 529 YNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIK 588
Query: 221 DAEVF-------------------------FKKMREMGVTPDVVTYNSLVDVYCKGRELE 255
+ ++F F ++ G PD+V +NS++ ++ + +
Sbjct: 589 EGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYD 648
Query: 256 KAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAI 315
+A +L+ +RE LSPD++TY S++ G+ KA ++LK +++ PD+ +YN I
Sbjct: 649 QAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVI 708
Query: 316 RNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCH 375
+ FC ++EA ++ EMT +G+ P TYN F + ++ M C
Sbjct: 709 KGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCR 768
Query: 376 PN 377
PN
Sbjct: 769 PN 770
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 115/253 (45%), Gaps = 15/253 (5%)
Query: 93 RRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVM-VVLARTAKVC 151
+ KGF T S ML + N++ IE R K+ + ++ +L K
Sbjct: 553 KSKGFKPTETSYSLMLQCYAKGG--NYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCR 610
Query: 152 SVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFN 210
++ + F FKK D FN++L + A + S++ P+L T+N
Sbjct: 611 ALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYN 670
Query: 211 ILL-------SGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDE 263
L+ WK AE K + + + PD+V+YN+++ +C+ +++A ++L E
Sbjct: 671 SLMDMYVRRGECWK----AEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSE 726
Query: 264 MRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKR 323
M ER + P + TY + + G +G + DV++ M + C P+ + + +C A +
Sbjct: 727 MTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGK 786
Query: 324 LREAYDLVDEMTS 336
EA D V ++ +
Sbjct: 787 YSEAMDFVSKIKT 799
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/402 (18%), Positives = 158/402 (39%), Gaps = 48/402 (11%)
Query: 96 GFFHTAFSLDTMLYILGRSRMFNHIWDLL--IEARWKDQTLITPRTVMVVLARTAKVCSV 153
G+ + + +L + G++ ++ +L +E +T ++ R
Sbjct: 311 GYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEA 370
Query: 154 RQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNIL 212
+E + K ++P+ T + ++ + +A +++S+K PN T+N +
Sbjct: 371 AGVIEMMTK-KGVMPNAIT--YTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAV 427
Query: 213 LS--GWKTPEDAEV-FFKKMREMGVTPDVVTYNSLVDVYCKGRELEK-AYKVLDEMRERD 268
LS G K+ + + M+ G +P+ T+N+++ + C + ++K +V EM+
Sbjct: 428 LSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLAL-CGNKGMDKFVNRVFREMKSCG 486
Query: 269 LSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAY 328
PD T+ ++I G G A + EM G V YNA + R
Sbjct: 487 FEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGE 546
Query: 329 DLVDEMTSKGLNPNATTYNLFFRIFYWSND---------------LQSSWNMYHRMM--- 370
+++ +M SKG P T+Y+L + + + + SW + ++
Sbjct: 547 NVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLAN 606
Query: 371 -----------------GLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYT 413
G P+ ++ +F + + A + + E G
Sbjct: 607 FKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDL 666
Query: 414 LVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQ-KPSNVSFRRI 454
+ + L D+ G+ +AE+ L+ +EK Q KP VS+ +
Sbjct: 667 VTYNSLMDMYVRRGECWKAEE-ILKTLEKSQLKPDLVSYNTV 707
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 3/207 (1%)
Query: 251 GRELEK--AYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDV 308
GRE + A K+LD++ ++ DV YT+I+ G+ +KA D+ + MKE G P +
Sbjct: 186 GRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTL 245
Query: 309 PAYNAAIRNFC-IAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYH 367
YN + F + + R+ ++DEM SKGL + T + L+ + +
Sbjct: 246 VTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFA 305
Query: 368 RMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMG 427
+ G P T + L+++F K AL + +M E + ++ + L G
Sbjct: 306 ELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAG 365
Query: 428 KLGEAEKCFLEMIEKGQKPSNVSFRRI 454
EA M +KG P+ +++ +
Sbjct: 366 FSKEAAGVIEMMTKKGVMPNAITYTTV 392
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/450 (21%), Positives = 185/450 (41%), Gaps = 69/450 (15%)
Query: 51 LRQSLKSSGVFLSNELIDQVLKRVRFSHANPSQTLEFYR-YTGRRKGFFHTAFSLDTMLY 109
L++ L+ G+ L+ E ++ +L R R H N + F R Y G+F
Sbjct: 243 LKEILRVHGLELAREFVEHMLSRGR--HLNAAVLSLFIRKYCS--DGYFDKG-------- 290
Query: 110 ILGRSRMFNHIWDLLIEARWKDQTLITPRTVM--VVLARTAKVCSVRQTVEFFRRFKKLV 167
W+LL+ + I P V V + + K +++ + K
Sbjct: 291 -----------WELLMGMK---HYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFG 336
Query: 168 PDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKTPED---AEV 224
D+ ++++ C+ +A + HS + RPN+ ++ LS + D A
Sbjct: 337 ISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR--LRPNIFVYSSFLSNICSTGDMLRAST 394
Query: 225 FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLG 284
F+++ E+G+ PD V Y +++D YC +KA++ + + P + T T +IG
Sbjct: 395 IFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACS 454
Query: 285 LVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNAT 344
G A V + MK G DV YN + + +L + ++L+DEM S G++P+
Sbjct: 455 RFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVA 514
Query: 345 TYNLFFRI-----------------------------------FYWSNDLQSSWNMYHRM 369
TYN+ F D Q ++ ++ M
Sbjct: 515 TYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYM 574
Query: 370 MGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKL 429
L P+ +C L+ + K +++E A+ L+ +++ G ++ + L C +G +
Sbjct: 575 ADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDI 634
Query: 430 GEAEKCFLEMIEKGQKPSNVSFRRIKVLME 459
+A + M+++G P+ + + + +E
Sbjct: 635 EKACELIGLMVQRGMLPNESTHHALVLGLE 664
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/450 (21%), Positives = 185/450 (41%), Gaps = 69/450 (15%)
Query: 51 LRQSLKSSGVFLSNELIDQVLKRVRFSHANPSQTLEFYR-YTGRRKGFFHTAFSLDTMLY 109
L++ L+ G+ L+ E ++ +L R R H N + F R Y G+F
Sbjct: 243 LKEILRVHGLELAREFVEHMLSRGR--HLNAAVLSLFIRKYCS--DGYFDKG-------- 290
Query: 110 ILGRSRMFNHIWDLLIEARWKDQTLITPRTVM--VVLARTAKVCSVRQTVEFFRRFKKLV 167
W+LL+ + I P V V + + K +++ + K
Sbjct: 291 -----------WELLMGMK---HYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFG 336
Query: 168 PDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKTPED---AEV 224
D+ ++++ C+ +A + HS + RPN+ ++ LS + D A
Sbjct: 337 ISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR--LRPNIFVYSSFLSNICSTGDMLRAST 394
Query: 225 FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLG 284
F+++ E+G+ PD V Y +++D YC +KA++ + + P + T T +IG
Sbjct: 395 IFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACS 454
Query: 285 LVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNAT 344
G A V + MK G DV YN + + +L + ++L+DEM S G++P+
Sbjct: 455 RFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVA 514
Query: 345 TYNLFFRI-----------------------------------FYWSNDLQSSWNMYHRM 369
TYN+ F D Q ++ ++ M
Sbjct: 515 TYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYM 574
Query: 370 MGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKL 429
L P+ +C L+ + K +++E A+ L+ +++ G ++ + L C +G +
Sbjct: 575 ADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDI 634
Query: 430 GEAEKCFLEMIEKGQKPSNVSFRRIKVLME 459
+A + M+++G P+ + + + +E
Sbjct: 635 EKACELIGLMVQRGMLPNESTHHALVLGLE 664
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 130/297 (43%), Gaps = 19/297 (6%)
Query: 160 FRRFKKLVPDFDTNCFNALLRTLCQEKS-MTDARNVYHSL-KHQFRPNLQTFNILLSGW- 216
F RF +L + + L +LC EK ++ A+++ + K P + L+ W
Sbjct: 552 FERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWC 611
Query: 217 --KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVI 274
A FF+ + + PD+ TY +++ YC+ E ++AY + ++M+ RD+ PDV+
Sbjct: 612 RVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVV 671
Query: 275 TYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEM 334
TY+ ++ D D+ +EM+ + PDV Y I +C L++ Y L +M
Sbjct: 672 TYSVLL-------NSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDM 724
Query: 335 TSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKV 394
+ + P+ TY + + + N+ M P+ LI K +
Sbjct: 725 KRREIVPDVVTYTVLLKN-------KPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDL 777
Query: 395 EMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
A +++ M+E G L C MG L EA+ F MIE G KP V +
Sbjct: 778 GEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPY 834
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 146/307 (47%), Gaps = 30/307 (9%)
Query: 109 YILGRSRMFNHIWDLLIEARWKDQTLITPRTVMV--VLARTAKVCSVRQTVEFFRRF--K 164
YI + + +W L +E P M ++ +V +VR+ EFF K
Sbjct: 580 YISKAQDLLDRMWKLGVE----------PEKSMYGKLIGAWCRVNNVRKAREFFEILVTK 629
Query: 165 KLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKTPEDAE 223
K+VPD T + ++ T C+ A ++ +K + +P++ T+++LL+ D E
Sbjct: 630 KIVPDLFT--YTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-----DPE 682
Query: 224 VFFKK-MREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGG 282
+ K+ M V PDVV Y +++ YC +L+K Y + +M+ R++ PDV+TYT +
Sbjct: 683 LDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVL--- 739
Query: 283 LGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPN 342
L +P+ R++ +EMK + PDV Y I C L EA + D+M G++P+
Sbjct: 740 --LKNKPE--RNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPD 795
Query: 343 ATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWG 402
A Y L+ + ++ RM+ G P+ LI + V A++L
Sbjct: 796 AAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVK 855
Query: 403 DMVEKGF 409
+M+EKG
Sbjct: 856 EMLEKGI 862
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 98/207 (47%), Gaps = 6/207 (2%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWK----TPEDAEVFFKKM 229
+ ++R LC E + DA +V + KH P++ ++ ++ G + P+ +VF K +
Sbjct: 294 YRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKML 353
Query: 230 REMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQP 289
++ + V +S++ YC+ +AY + E RE ++S D + Y LG +G+
Sbjct: 354 KKRKRI-NCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKV 412
Query: 290 DKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLF 349
++A ++ +EM G PDV Y I C+ + +A+DL+ EM G P+ YN+
Sbjct: 413 EEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVL 472
Query: 350 FRIFYWSNDLQSSWNMYHRMMGLGCHP 376
+ Q ++ M G P
Sbjct: 473 AGGLATNGLAQEAFETLKMMENRGVKP 499
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 8/162 (4%)
Query: 188 MTDARNVYHSLKHQFR----PNLQTFNILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNS 243
+ D + VY K R P++ T+ +LL PE ++M+ V PDV Y
Sbjct: 711 LNDLKKVYALFKDMKRREIVPDVVTYTVLLKN--KPE--RNLSREMKAFDVKPDVFYYTV 766
Query: 244 LVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYG 303
L+D CK +L +A ++ D+M E + PD YT++I +G +A+ + M E G
Sbjct: 767 LIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESG 826
Query: 304 CYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATT 345
PDV Y A I C + +A LV EM KG+ P +
Sbjct: 827 VKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKAS 868
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/333 (18%), Positives = 128/333 (38%), Gaps = 33/333 (9%)
Query: 152 SVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKH-QFRPNLQTFN 210
++ + V+ F + K + +++L+ CQ + ++A +++ + + +N
Sbjct: 341 NIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYN 400
Query: 211 IL---LSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRER 267
+ L E+A F++M G+ PDV+ Y +L+ C + A+ ++ EM
Sbjct: 401 VAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGT 460
Query: 268 DLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREA 327
+PD++ Y + GGL G +A + LK M+ G P +N I A L +A
Sbjct: 461 GKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKA 520
Query: 328 YDLVDEMTSKGLN-----------------------------PNATTYNLFFRIFYWSND 358
+ + K P + + LF + +
Sbjct: 521 EAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDY 580
Query: 359 LQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDV 418
+ + ++ RM LG P LI + + V A + + +V K +
Sbjct: 581 ISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTI 640
Query: 419 LFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+ + C + + +A F +M + KP V++
Sbjct: 641 MINTYCRLNEPKQAYALFEDMKRRDVKPDVVTY 673
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 17/191 (8%)
Query: 142 VVLARTAKVCSVRQTVEFFRRFKK--LVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLK 199
+++ R + +++ F+ K+ +VPD T + LL+ RN+ +K
Sbjct: 703 IMINRYCHLNDLKKVYALFKDMKRREIVPDVVT--YTVLLKN-------KPERNLSREMK 753
Query: 200 H-QFRPNLQTFNILLSGWKTP----EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGREL 254
+P++ + +L+ W+ +A+ F +M E GV PD Y +L+ CK L
Sbjct: 754 AFDVKPDVFYYTVLID-WQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYL 812
Query: 255 EKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAA 314
++A + D M E + PDV+ YT++I G G KA ++KEM E G P + +A
Sbjct: 813 KEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAV 872
Query: 315 IRNFCIAKRLR 325
AK LR
Sbjct: 873 HYAKLKAKGLR 883
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 88/212 (41%)
Query: 239 VTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKE 298
+ Y +V C +E A V+ +M + + PDV Y++II G KA DV +
Sbjct: 292 IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNK 351
Query: 299 MKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSND 358
M + + ++ ++ +C EAYDL E ++ + YN+ F
Sbjct: 352 MLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGK 411
Query: 359 LQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDV 418
++ + ++ M G G P+ + LI Q K A L +M G ++ +V
Sbjct: 412 VEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNV 471
Query: 419 LFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVS 450
L L G EA + M +G KP+ V+
Sbjct: 472 LAGGLATNGLAQEAFETLKMMENRGVKPTYVT 503
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 134/301 (44%), Gaps = 10/301 (3%)
Query: 168 PDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKTPEDAEV--- 224
PD T F L+ LC E + A + + + Q + +++G D E
Sbjct: 8 PDVVT--FTTLMNGLCCEGRVLQALALVDRMVEEGH---QPYGTIINGLCKMGDTESALN 62
Query: 225 FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLG 284
KM E + VV YN+++D CK A + EM ++ + PDVITY+ +I
Sbjct: 63 LLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFC 122
Query: 285 LVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNAT 344
G+ A +L++M E PDV ++A I ++ EA ++ +M +G+ P
Sbjct: 123 RSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTI 182
Query: 345 TYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDM 404
TYN F + L + M M C P+ + LI + K ++V+ ++++ +M
Sbjct: 183 TYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 242
Query: 405 VEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRH 464
+G + T+ L C +G L A+ MI G P+ ++F+ +L L ++
Sbjct: 243 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQ--SMLASLCSKK 300
Query: 465 E 465
E
Sbjct: 301 E 301
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 111/228 (48%), Gaps = 14/228 (6%)
Query: 229 MREMGVTPDVVTYNSLVD-VYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVG 287
M E G PDVVT+ +L++ + C+GR L+ A ++D M E P Y +II GL +G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQ-ALALVDRMVEEGHQP----YGTIINGLCKMG 55
Query: 288 QPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY- 346
+ A ++L +M+E V YNA I C A +L EM KG+ P+ TY
Sbjct: 56 DTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYS 115
Query: 347 ---NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGD 403
+ F R W++ Q +M R + +P+ + LI K+ KV A +++GD
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQI----NPDVVTFSALINALVKEGKVSEAEEIYGD 171
Query: 404 MVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
M+ +G T+ + + D C +L +A++ M K P V+F
Sbjct: 172 MLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTF 219
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 118/249 (47%), Gaps = 17/249 (6%)
Query: 60 VFLSNELIDQVLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNH 119
V + N +ID++ K HA T E + KG F + M+ RS +
Sbjct: 76 VVIYNAIIDRLCKDGHHIHAQNLFT-EMHD-----KGIFPDVITYSGMIDSFCRSGRWTD 129
Query: 120 IWDLLIE--ARWKDQTLITPRTVMVVLARTAKVCSVRQTV-EFFRRFKKLVPDFDTNCFN 176
LL + R + ++T ++ L + KV + + RR + P T +N
Sbjct: 130 AEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR--GIFPT--TITYN 185
Query: 177 ALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGW---KTPEDAEVFFKKMREM 232
+++ C++ + DA+ + S+ + P++ TF+ L++G+ K ++ F +M
Sbjct: 186 SMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR 245
Query: 233 GVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKA 292
G+ + VTY +L+ +C+ +L+ A +L+ M ++P+ IT+ S++ L + KA
Sbjct: 246 GIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKA 305
Query: 293 RDVLKEMKE 301
+L+++++
Sbjct: 306 FAILEDLQK 314
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 174/418 (41%), Gaps = 49/418 (11%)
Query: 35 VHRVMTIITT-TSSPENLRQSLKSSGVFLSNELIDQVLKRVRFSHANPSQTLEFYRYTGR 93
+H V+ I+++ ++L ++L V S+ L+ QV++ + + +P + L F+ ++ +
Sbjct: 37 LHEVIRIVSSPVGGLDDLEENLNQVSVSPSSNLVTQVIESCK-NETSPRRLLRFFSWSCK 95
Query: 94 RKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSV 153
G + +L +L + + LL + R K+ + +T +V KV
Sbjct: 96 SLGSSLHDKEFNYVLRVLAEKKDHTAMQILLSDLR-KENRAMDKQTFSIVAETLVKVGKE 154
Query: 154 RQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPN-LQTFNIL 212
+ F+ K D A++ LC + A V H K N L + L
Sbjct: 155 EDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSL 214
Query: 213 LSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCK-------GRELEKAYKVLD 262
L GW + ++A + M+ G+TPD+ +NSL+ C+ + +A ++
Sbjct: 215 LFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIML 274
Query: 263 EMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAK 322
EMR + P ++Y ++ LG + ++ +L++MK GC PD +Y +R +
Sbjct: 275 EMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTG 334
Query: 323 RLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCM 382
R + +VDEM +G P R FY+ ++G+ C
Sbjct: 335 RFGKGNQIVDEMIERGFRPE--------RKFYYD------------LIGVLCGV------ 368
Query: 383 FLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMI 440
E+V ALQL+ M G Y V D+L LC G + + + E +
Sbjct: 369 ---------ERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEAL 417
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 137/330 (41%), Gaps = 49/330 (14%)
Query: 131 DQTLITPRTVMV--VLARTAKVCSVRQTVEFFR-RFKKLVPDFDTNCFNALLRTLCQEKS 187
+Q ++P + +V V+ S R+ + FF K L FN +LR L ++K
Sbjct: 59 NQVSVSPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKD 118
Query: 188 MTDARNVYHSLKHQFRP-NLQTFNIL---LSGWKTPEDAEVFFKKMREMGVTPDVVTYNS 243
T + + L+ + R + QTF+I+ L EDA FK + + D T +
Sbjct: 119 HTAMQILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTA 178
Query: 244 LVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYG 303
++ C +++A V+ ++ ++ Y S++ G + +AR V+++MK G
Sbjct: 179 IISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAG 238
Query: 304 CYPDVPAYNAAIRNFCIAKRLR-------EAYDLVDEMTSKGLNPNATTYNLFFRIFYWS 356
PD+ +N+ + C R EA +++ EM S + P + +YN+ +
Sbjct: 239 ITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRT 298
Query: 357 NDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVS 416
++ S + +M GC P+T GSY V
Sbjct: 299 RRVRESCQILEQMKRSGCDPDT-------------------------------GSYYFVV 327
Query: 417 DVLFDLLCDMGKLGEAEKCFLEMIEKGQKP 446
VL+ G+ G+ + EMIE+G +P
Sbjct: 328 RVLYL----TGRFGKGNQIVDEMIERGFRP 353
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 127/281 (45%), Gaps = 4/281 (1%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLK-HQFRPNLQTFNILLSGWKTP---EDAEVFFKKMR 230
FN+L+ C+ +A V+ + + +P++ TF ++ E+A F +M
Sbjct: 499 FNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMF 558
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
+MG+ PD + Y +L+D +CK + ++ D M+ +S D+ +I L + +
Sbjct: 559 KMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIE 618
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
A + E PD+ YN I +C +RL EA + + + PN T +
Sbjct: 619 DASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 678
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG 410
+ +ND+ + M+ M G PN + L+ F K +E + +L+ +M EKG
Sbjct: 679 HVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGIS 738
Query: 411 SYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+ ++ D LC G++ EA F + I+ P V++
Sbjct: 739 PSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAY 779
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 133/293 (45%), Gaps = 3/293 (1%)
Query: 176 NALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGW-KTPEDAEVF--FKKMREM 232
N +L+ L ++ +R + L PN+ TF L++G+ K E F FK M +
Sbjct: 256 NKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR 315
Query: 233 GVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKA 292
G+ PD++ Y++L+D Y K L +K+ + + + DV+ ++S I G A
Sbjct: 316 GIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATA 375
Query: 293 RDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRI 352
V K M G P+V Y I+ C R+ EA+ + ++ +G+ P+ TY+
Sbjct: 376 SVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDG 435
Query: 353 FYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSY 412
F +L+S + +Y M+ +G P+ L+ KQ + A++ M+ +
Sbjct: 436 FCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLN 495
Query: 413 TLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHE 465
+V + L D C + + EA K F M G KP +F + + + R E
Sbjct: 496 VVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLE 548
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 103/207 (49%), Gaps = 8/207 (3%)
Query: 142 VVLARTAKVCSVRQTVEFFRRF--KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLK 199
VV+ K + +FF K+ PD T +N ++ C + + +A ++ LK
Sbjct: 606 VVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVT--YNTMICGYCSLRRLDEAERIFELLK 663
Query: 200 -HQFRPNLQTFNILLSGWKTPED---AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELE 255
F PN T IL+ D A F M E G P+ VTY L+D + K ++E
Sbjct: 664 VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIE 723
Query: 256 KAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAI 315
++K+ +EM+E+ +SP +++Y+ II GL G+ D+A ++ + + PDV AY I
Sbjct: 724 GSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 783
Query: 316 RNFCIAKRLREAYDLVDEMTSKGLNPN 342
R +C RL EA L + M G+ P+
Sbjct: 784 RGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 129/283 (45%), Gaps = 2/283 (0%)
Query: 198 LKHQFRPNLQTFNILLSGWKTP--EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELE 255
++ FR + + N +L G E A + + G P+VVT+ +L++ +CK E++
Sbjct: 244 MERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMD 303
Query: 256 KAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAI 315
+A+ + M +R + PD+I Y+++I G G + + G DV +++ I
Sbjct: 304 RAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTI 363
Query: 316 RNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCH 375
+ + L A + M +G++PN TY + + + ++ MY +++ G
Sbjct: 364 DVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME 423
Query: 376 PNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKC 435
P+ + LI F K + L+ DM++ G+ ++ VL D L G + A +
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483
Query: 436 FLEMIEKGQKPSNVSFRRIKVLMELANRHEALQNLTQKMAVFG 478
++M+ + + + V F + NR + + + M ++G
Sbjct: 484 SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYG 526
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 127/316 (40%), Gaps = 39/316 (12%)
Query: 175 FNALLRTLCQEKSMTDARNVYHS-LKHQFRPNLQTFNILLSGW---KTPEDAEVFFKKMR 230
+ L++ LCQ+ + +A +Y LK P++ T++ L+ G+ ++ M
Sbjct: 394 YTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
+MG PDVV Y LVD K + A + +M + + +V+ + S+I G + + D
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD 513
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
+A V + M YG PDV + +R + RL EA L M GL P+A Y
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLI 573
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKG-- 408
F ++ M + C +I L K ++E A + + +++E
Sbjct: 574 DAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKME 633
Query: 409 ---------------------------------FGSYTLVSDVLFDLLCDMGKLGEAEKC 435
FG T+ +L +LC + A +
Sbjct: 634 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 693
Query: 436 FLEMIEKGQKPSNVSF 451
F M EKG KP+ V++
Sbjct: 694 FSIMAEKGSKPNAVTY 709
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 136/319 (42%), Gaps = 42/319 (13%)
Query: 172 TNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKTPE---DAEVFFKK 228
T+ +N + LC + DAR + S+ P++ ++N L+ G+ +A + F
Sbjct: 343 TSTYNIYICALCDFGRIDDARELLSSMA---APDVVSYNTLMHGYIKMGKFVEASLLFDD 399
Query: 229 MREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQ 288
+R + P +VTYN+L+D C+ LE A ++ +EM + + PDVITYT+++ G G
Sbjct: 400 LRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGN 459
Query: 289 PDKARDVLKEMKEYGC------------------------------------YPDVPAYN 312
A +V EM G PD+ YN
Sbjct: 460 LSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYN 519
Query: 313 AAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGL 372
I C L +A + ++ GL P+ TY R + + + + N+Y M+
Sbjct: 520 VRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRK 579
Query: 373 GCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEA 432
+P+ + LI K ++E A Q +M ++G + + L +C G + EA
Sbjct: 580 RLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEA 639
Query: 433 EKCFLEMIEKGQKPSNVSF 451
+ +M E+G P+ S+
Sbjct: 640 YRYLCKMEEEGIPPNKYSY 658
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 169/429 (39%), Gaps = 80/429 (18%)
Query: 94 RKGFFHTAFSLDTMLYILGRSRMFNH---IWDLLIEARWKDQTLITPRTVMVVLARTAKV 150
RKGF + + + +L +L SRM N +++ +IE T+IT T++ + +
Sbjct: 196 RKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIM-PTVITFNTMLDSCFKAGDL 254
Query: 151 CSV--------RQTVEFFR-RFKKLVPDFDTN-----------------------CFNAL 178
V R+ +EF + L+ F N FN L
Sbjct: 255 ERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPL 314
Query: 179 LRTLCQEKSMTDARNVYHS-LKHQFRPNLQTFNIL---LSGWKTPEDAEVFFKKMREMGV 234
+ C++ DA V L P T+NI L + +DA M
Sbjct: 315 IEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM----A 370
Query: 235 TPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARD 294
PDVV+YN+L+ Y K + +A + D++R D+ P ++TY ++I GL G + A+
Sbjct: 371 APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQR 430
Query: 295 VLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNA----------- 343
+ +EM +PDV Y ++ F L A ++ DEM KG+ P+
Sbjct: 431 LKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGEL 490
Query: 344 -------------------------TTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNT 378
T YN+ +L + ++ +G P+
Sbjct: 491 RLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDH 550
Query: 379 QSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLE 438
+ +IR + + + +MA L+ +M+ K + VL G+L +A + E
Sbjct: 551 VTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTE 610
Query: 439 MIEKGQKPS 447
M ++G +P+
Sbjct: 611 MKKRGVRPN 619
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 110/247 (44%), Gaps = 7/247 (2%)
Query: 166 LVPDFDTNCFNALLRTLCQEKSMTDARNVYHS-LKHQFRPNLQTFNILLSGWKTPEDAEV 224
+ PD T + L++ + +++ A VY L+ +P+ + G D++
Sbjct: 440 IFPDVIT--YTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDK 497
Query: 225 FFKKMREMGVT----PDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSII 280
F+ EM T PD+ YN +D CK L KA + ++ L PD +TYT++I
Sbjct: 498 AFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVI 557
Query: 281 GGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLN 340
G GQ AR++ EM YP V Y I A RL +A+ EM +G+
Sbjct: 558 RGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVR 617
Query: 341 PNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQL 400
PN T+N + ++ ++ +M G PN S LI EK E ++L
Sbjct: 618 PNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKL 677
Query: 401 WGDMVEK 407
+ +M++K
Sbjct: 678 YKEMLDK 684
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 117/257 (45%), Gaps = 7/257 (2%)
Query: 198 LKHQFRPNLQTFNILLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGREL 254
++ F P+++ NI+L + A ++ M E G+ P V+T+N+++D K +L
Sbjct: 195 IRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDL 254
Query: 255 EKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAA 314
E+ K+ EM+ R++ +TY +I G G+ ++AR +M+ G ++N
Sbjct: 255 ERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPL 314
Query: 315 IRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGC 374
I +C +A+ + DEM + G+ P +TYN++ + + + M
Sbjct: 315 IEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA--- 371
Query: 375 HPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEK 434
P+ S L+ + K K A L+ D+ + + L D LC+ G L A++
Sbjct: 372 -PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQR 430
Query: 435 CFLEMIEKGQKPSNVSF 451
EM + P +++
Sbjct: 431 LKEEMTTQLIFPDVITY 447
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 87/185 (47%), Gaps = 4/185 (2%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTPED---AEVFF 226
D +N + LC+ ++ A + + P+ T+ ++ G+ A +
Sbjct: 514 DLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLY 573
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
+M + P V+TY L+ + K LE+A++ EM++R + P+V+T+ +++ G+
Sbjct: 574 DEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKA 633
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
G D+A L +M+E G P+ +Y I C ++ E L EM K + P+ T+
Sbjct: 634 GNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTH 693
Query: 347 NLFFR 351
F+
Sbjct: 694 RALFK 698
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 95/250 (38%), Gaps = 6/250 (2%)
Query: 226 FKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGL 285
F+KM G P V N ++ V R + KA V + M E + P VIT+ +++
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 286 VGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATT 345
G ++ + EMK YN I F ++ EA +M G +
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 346 YNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMV 405
+N + +W + M+ G +P T + I +++ A +L M
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA 370
Query: 406 EKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRR-IKVLMELANRH 464
SY + L MGK EA F ++ PS V++ I L E N
Sbjct: 371 APDVVSY----NTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNL- 425
Query: 465 EALQNLTQKM 474
E Q L ++M
Sbjct: 426 EGAQRLKEEM 435
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 132/290 (45%), Gaps = 7/290 (2%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQT--FNILLSGWKTP---EDAEVF 225
D AL+ LC + + A + R L T +N L+SG+ E AE
Sbjct: 183 DNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEAL 242
Query: 226 FKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGL 285
M ++G PD+VTYN L++ Y L++A V+ EM + D +Y ++
Sbjct: 243 KSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCR 302
Query: 286 VGQPDKARD-VLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNAT 344
V PDK + ++KEM+ G + DV +Y+ I FC A R+AY L +EM KG+ N
Sbjct: 303 VSHPDKCYNFMVKEMEPRG-FCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVV 361
Query: 345 TYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDM 404
TY + F + + + +M LG P+ ++ K V+ A ++ DM
Sbjct: 362 TYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDM 421
Query: 405 VEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
+E + + L LC G++ EA K F +M K P ++F+ I
Sbjct: 422 IEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFI 471
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%)
Query: 219 PEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTS 278
P+ F K E DVV+Y++L++ +C+ KAY++ +EMR++ + +V+TYTS
Sbjct: 306 PDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTS 365
Query: 279 IIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKG 338
+I G A+ +L +M E G PD Y + + C + + +AY + ++M
Sbjct: 366 LIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHE 425
Query: 339 LNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMAL 398
+ P+A +YN S + + ++ M G C P+ + F+I + +K+ A
Sbjct: 426 ITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAY 485
Query: 399 QLWGDMVEKGFGSYTLVSDVLFDLLCDM 426
++W M++KGF VSD L C M
Sbjct: 486 KVWDQMMDKGFTLDRDVSDTLIKASCSM 513
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 120/276 (43%), Gaps = 8/276 (2%)
Query: 138 RTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHS 197
R+ + L ++ + + Q + R V FD +N + L +E A +Y
Sbjct: 13 RSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFD---YNRFIGVLVRESRFELAEAIYWD 69
Query: 198 LK-HQFRPNLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRE 253
+K F T++ +SG K + + M +G PD+ +N +D+ C+ +
Sbjct: 70 MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129
Query: 254 LEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNA 313
+ A + M +R PDV++YT +I GL G+ A ++ M G PD A A
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAA 189
Query: 314 AIRNFCIAKRLREAYDLV-DEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGL 372
+ C A+++ AY++V +E+ S + + YN F + ++ + + M +
Sbjct: 190 LVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKI 249
Query: 373 GCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKG 408
GC P+ + L+ + ++ A + +MV G
Sbjct: 250 GCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSG 285
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 95/242 (39%), Gaps = 3/242 (1%)
Query: 239 VTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKE 298
+ Y S + K ++ A +V DEMR Y IG L + + A + +
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWD 69
Query: 299 MKEYGCYPDVP-AYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSN 357
MK G + +P Y+ I C K+ L+ +M + G P+ +N++ + N
Sbjct: 70 MKPMG-FSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCREN 128
Query: 358 DLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSD 417
+ + + M+ G P+ S LI + KV A+++W M+ G
Sbjct: 129 KVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACA 188
Query: 418 VLFDLLCDMGKLGEAEKCFLEMIEKGQ-KPSNVSFRRIKVLMELANRHEALQNLTQKMAV 476
L LC K+ A + E I+ + K S V + + A R E + L M+
Sbjct: 189 ALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSK 248
Query: 477 FG 478
G
Sbjct: 249 IG 250
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 162/358 (45%), Gaps = 5/358 (1%)
Query: 95 KGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVR 154
KG A++ +T++ + R F+ + +L + KD + T +++ + K +
Sbjct: 253 KGIKPEAYTYNTIINAYVKQRDFSGVEGVL-KVMKKDGVVYNKVTYTLLMELSVKNGKMS 311
Query: 155 QTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILL 213
+ F ++ + D + + +L+ C++ +M A ++ L + P+ T+ L+
Sbjct: 312 DAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALI 371
Query: 214 SG-WKTPE--DAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLS 270
G K E AE+ +M+ GV V +N+L+D YC+ +++A + D M ++
Sbjct: 372 DGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQ 431
Query: 271 PDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDL 330
DV T +I + + D+A+ L M E G +Y I +C + EA L
Sbjct: 432 ADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRL 491
Query: 331 VDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKK 390
EM+SKG+ PNA TYN+ + ++ + + M G P++ + LI
Sbjct: 492 FVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECI 551
Query: 391 QEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSN 448
+ V+ A++L+ +M KG ++ V+ L GK EA + EM KG N
Sbjct: 552 ADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDN 609
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 111/267 (41%), Gaps = 35/267 (13%)
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRE-------------------------- 253
E ++ K+ G+ P+ TYN++++ Y K R+
Sbjct: 241 EKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLL 300
Query: 254 ---------LEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGC 304
+ A K+ DEMRER + DV YTS+I G +A + E+ E G
Sbjct: 301 MELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGL 360
Query: 305 YPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWN 364
P Y A I C + A L++EM SKG+N +N + + +
Sbjct: 361 SPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASM 420
Query: 365 MYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLC 424
+Y M G + +C + F + ++ + A Q M+E G T+ L D+ C
Sbjct: 421 IYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYC 480
Query: 425 DMGKLGEAEKCFLEMIEKGQKPSNVSF 451
G + EA++ F+EM KG +P+ +++
Sbjct: 481 KEGNVEEAKRLFVEMSSKGVQPNAITY 507
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 116/278 (41%), Gaps = 36/278 (12%)
Query: 225 FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGL- 283
F++M + GV V + +V+ C+ E+EK+ K++ E + + P+ TY +II
Sbjct: 211 IFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYV 270
Query: 284 ------------------GLV----------------GQPDKARDVLKEMKEYGCYPDVP 309
G+V G+ A + EM+E G DV
Sbjct: 271 KQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVH 330
Query: 310 AYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRM 369
Y + I C ++ A+ L DE+T KGL+P++ TY ++ ++ + + M
Sbjct: 331 VYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEM 390
Query: 370 MGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKL 429
G + LI + ++ V+ A ++ M +KGF + + + + +
Sbjct: 391 QSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRY 450
Query: 430 GEAEKCFLEMIEKGQKPSNVSFRR-IKVLMELANRHEA 466
EA++ M+E G K S VS+ I V + N EA
Sbjct: 451 DEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEA 488
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 62/127 (48%)
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
E+A+ F +M GV P+ +TYN ++ YCK ++++A K+ M + PD TYTS+
Sbjct: 486 EEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSL 545
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
I G + D+A + EM G + Y I A + EA+ L DEM KG
Sbjct: 546 IHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGY 605
Query: 340 NPNATTY 346
+ Y
Sbjct: 606 TIDNKVY 612
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 128/301 (42%), Gaps = 27/301 (8%)
Query: 32 DGDVHRVMTIITTTSSPENLRQS------LKSSGV----FLSNELIDQVLKRVRFSHANP 81
+ DVH ++I+ N++++ L G+ + LID V K A
Sbjct: 326 ESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAA-- 383
Query: 82 SQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNH---IWDLLIEARWKDQTLITPR 138
E + KG T +T++ R M + I+D++ E + + T
Sbjct: 384 ----EILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVM-EQKGFQADVFTCN 438
Query: 139 TVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL 198
T+ R + +Q + FR + V T + L+ C+E ++ +A+ ++ +
Sbjct: 439 TIASCFNRLKRYDEAKQWL--FRMMEGGVK-LSTVSYTNLIDVYCKEGNVEEAKRLFVEM 495
Query: 199 KHQ-FRPNLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGREL 254
+ +PN T+N+++ + ++A M G+ PD TY SL+ C +
Sbjct: 496 SSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNV 555
Query: 255 EKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAA 314
++A ++ EM + L + +TYT +I GL G+ D+A + EMK G D Y A
Sbjct: 556 DEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTAL 615
Query: 315 I 315
I
Sbjct: 616 I 616
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 85/202 (42%)
Query: 250 KGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVP 309
K R ++ ++ M + + V + T ++ GL G+ +K++ ++KE G P+
Sbjct: 201 KRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAY 260
Query: 310 AYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRM 369
YN I + + ++ M G+ N TY L + + + + ++ M
Sbjct: 261 TYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEM 320
Query: 370 MGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKL 429
G + LI ++ ++ A L+ ++ EKG + L D +C +G++
Sbjct: 321 RERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEM 380
Query: 430 GEAEKCFLEMIEKGQKPSNVSF 451
G AE EM KG + V F
Sbjct: 381 GAAEILMNEMQSKGVNITQVVF 402
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 137/300 (45%), Gaps = 45/300 (15%)
Query: 164 KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKTP--- 219
+++ PD T FNAL+ +E + +A + + H+ P+ T+N ++ G+
Sbjct: 360 REINPDVLT--FNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRF 417
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
+DA K M ++ +PDVVT+N+++DVYC+ + +++ ++L E+ R L + TY ++
Sbjct: 418 DDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYP--------------------------------- 306
I G V + A+D+ +EM +G P
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI 533
Query: 307 --DVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWN 364
D AYN I C ++ EA+DL + G+ P+ TYN+ F + + +
Sbjct: 534 DLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV 593
Query: 365 MYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLC 424
++H+M G P+ + LIR K +++ +++L +M GF + +++C
Sbjct: 594 LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIIC 653
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 140/345 (40%), Gaps = 58/345 (16%)
Query: 160 FRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVY----------------HSLKHQFR 203
F + KL D FN LL LC E +++A ++ ++
Sbjct: 164 FGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLT 223
Query: 204 PNLQTFNILLSGWKTPE---DAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKV 260
P + TFN L++G +A KM G+ DVVTY ++V+ CK + + A +
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 261 LDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCI 320
L +M E + PDV+ Y++II L G A+ + EM E G P+V YN I FC
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343
Query: 321 AKR-----------------------------------LREAYDLVDEMTSKGLNPNATT 345
R L EA L DEM + + P+ T
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403
Query: 346 YNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMV 405
YN F N + +M+ M P+ + +I ++ + ++V+ +QL ++
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459
Query: 406 EKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVS 450
+G + T + L C++ L A+ F EMI G P ++
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 107/248 (43%), Gaps = 15/248 (6%)
Query: 219 PEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTS 278
P+ A ++KM + ++ ++N L+ +C +L + ++ + PDV+T+ +
Sbjct: 122 PDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNT 181
Query: 279 IIGGLGLVGQPDKAR---------------DVLKEMKEYGCYPDVPAYNAAIRNFCIAKR 323
++ GL L + +A + +M E G P V +N I C+ R
Sbjct: 182 LLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGR 241
Query: 324 LREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMF 383
+ EA LV++M KGL+ + TY D +S+ N+ +M P+
Sbjct: 242 VLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSA 301
Query: 384 LIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKG 443
+I K A L+ +M+EKG + + D C G+ +A++ +MIE+
Sbjct: 302 IIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE 361
Query: 444 QKPSNVSF 451
P ++F
Sbjct: 362 INPDVLTF 369
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 91/188 (48%), Gaps = 9/188 (4%)
Query: 94 RKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVM--VVLARTAKVC 151
R+G + +T+++ N DL E + P T+ ++L +
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG---VCPDTITCNILLYGFCENE 516
Query: 152 SVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLK-HQFRPNLQTFN 210
+ + +E F + D DT +N ++ +C+ + +A +++ SL H P++QT+N
Sbjct: 517 KLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYN 576
Query: 211 ILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRER 267
+++SG+ DA V F KM++ G PD TYN+L+ K E++K+ +++ EMR
Sbjct: 577 VMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSN 636
Query: 268 DLSPDVIT 275
S D T
Sbjct: 637 GFSGDAFT 644
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 141/319 (44%), Gaps = 23/319 (7%)
Query: 140 VMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL- 198
+M L + + + V +R + PD T + LL C + A+++ +
Sbjct: 367 LMDGLCKLGMLSDAKTIVGLMKR-NGVCPDAVT--YGCLLHGYCSVGKVDAAKSLLQEMM 423
Query: 199 KHQFRPNLQTFNILL-SGWKTP--EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELE 255
++ PN T NILL S WK +AE +KM E G D VT N +VD C EL+
Sbjct: 424 RNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELD 483
Query: 256 KAYKVLDEMRERDLSPDVITYTSIIGGLG--LVGQPDKARDVLKEMKEYGCYPDVPAYNA 313
KA +++ MR + ++ +G LG +G D + + E C PD+ Y+
Sbjct: 484 KAIEIVKGMR--------VHGSAALGNLGNSYIGLVDDS------LIENNCLPDLITYST 529
Query: 314 AIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLG 373
+ C A R EA +L EM + L P++ YN+F F + S++ + M G
Sbjct: 530 LLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKG 589
Query: 374 CHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAE 433
CH + ++ LI + ++ L +M EKG + LC+ K+ +A
Sbjct: 590 CHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDAT 649
Query: 434 KCFLEMIEKGQKPSNVSFR 452
EM++K P+ SF+
Sbjct: 650 NLLDEMMQKNIAPNVFSFK 668
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 171/405 (42%), Gaps = 33/405 (8%)
Query: 124 LIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLC 183
L++ ++ L T ++L K+ + + E R+ + DT N ++ LC
Sbjct: 418 LLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLC 477
Query: 184 QEKSMTDARNVYHSLK------------------------HQFRPNLQTFNILLSGWKTP 219
+ A + ++ + P+L T++ LL+G
Sbjct: 478 GSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKA 537
Query: 220 ---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITY 276
+A+ F +M + PD V YN + +CK ++ A++VL +M ++ + TY
Sbjct: 538 GRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETY 597
Query: 277 TSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTS 336
S+I GLG+ Q + ++ EMKE G P++ YN AI+ C +++ +A +L+DEM
Sbjct: 598 NSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQ 657
Query: 337 KGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGL-GCHPNTQSCMFLIRLFKKQEKVE 395
K + PN ++ F D + ++ + + G S MF L Q +
Sbjct: 658 KNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQ--LL 715
Query: 396 MALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRR-I 454
A +L ++++GF T + L + LC +L A +MI++G + I
Sbjct: 716 KATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVI 775
Query: 455 KVLMELANRHEA--LQNLTQKMAVFGRPVQVRESRPVQVHESRES 497
L ++ N+ EA + +MA G + +H+ + +
Sbjct: 776 DGLGKMGNKKEANSFADKMMEMASVGEVANKVDPNARDIHQKKHN 820
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 126/266 (47%), Gaps = 8/266 (3%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKTPE---DAEVFFKKMR 230
+N ++ + C+E D+ + ++ + P++ TFN +S DA F M
Sbjct: 220 YNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDME 279
Query: 231 ---EMGVT-PDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
+G+ P+ +TYN ++ +CK LE A + + +RE D + +Y + GL
Sbjct: 280 LDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRH 339
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
G+ +A VLK+M + G P + +YN + C L +A +V M G+ P+A TY
Sbjct: 340 GKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTY 399
Query: 347 NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE 406
+ + ++ ++ MM C PN +C L+ K ++ A +L M E
Sbjct: 400 GCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNE 459
Query: 407 KGFGSYTLVSDVLFDLLCDMGKLGEA 432
KG+G T+ +++ D LC G+L +A
Sbjct: 460 KGYGLDTVTCNIIVDGLCGSGELDKA 485
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 149/344 (43%), Gaps = 34/344 (9%)
Query: 139 TVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL 198
T++ R + + VE R + LVPD T FN+ + LC+E + DA ++ +
Sbjct: 222 TIVSSFCREGRNDDSEKMVEKMRE-EGLVPDIVT--FNSRISALCKEGKVLDASRIFSDM 278
Query: 199 KHQF-----RPNLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCK 250
+ RPN T+N++L G+ EDA+ F+ +RE + +YN + +
Sbjct: 279 ELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVR 338
Query: 251 GRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPA 310
+ +A VL +M ++ + P + +Y ++ GL +G A+ ++ MK G PD
Sbjct: 339 HGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVT 398
Query: 311 YNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMM 370
Y + +C ++ A L+ EM PNA T N+ + + + + +M
Sbjct: 399 YGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMN 458
Query: 371 GLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG-------SYT-LVSD----- 417
G +T +C ++ +++ A+++ M G SY LV D
Sbjct: 459 EKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIEN 518
Query: 418 ----------VLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
L + LC G+ EA+ F EM+ + +P +V++
Sbjct: 519 NCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAY 562
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 115/257 (44%), Gaps = 9/257 (3%)
Query: 203 RPNLQTFNILLSGWKTPEDAEV---FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYK 259
+P++ +N+LL E +K M G+ P T+N L+ C ++ A +
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 260 VLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFC 319
+ DEM E+ P+ T+ ++ G G DK ++L M+ +G P+ YN + +FC
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 320 IAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRM-----MGLGC 374
R ++ +V++M +GL P+ T+N + + ++ M +GL
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLP- 287
Query: 375 HPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEK 434
PN+ + +++ F K +E A L+ + E + ++ L GK EAE
Sbjct: 288 RPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAET 347
Query: 435 CFLEMIEKGQKPSNVSF 451
+M +KG PS S+
Sbjct: 348 VLKQMTDKGIGPSIYSY 364
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/476 (22%), Positives = 191/476 (40%), Gaps = 101/476 (21%)
Query: 53 QSLKSSGVFLSNELIDQVLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILG 112
++L + S+EL++ +L+R+R NP LE + +++ F + M++IL
Sbjct: 59 EALHDLSLDFSDELLNSILRRLRL---NPEACLEIFNLASKQQKFRPDYKAYCKMVHILS 115
Query: 113 RSRMF-------------NH----IWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQ 155
R+R + NH +W L+ R + +P ++L A+ V+
Sbjct: 116 RARNYQQTKSYLCELVALNHSGFVVWGELV--RVFKEFSFSPTVFDMILKVYAEKGLVKN 173
Query: 156 TVEFF-----------------------RRFKKLV--------------PDFDTNCF--N 176
+ F R+ + V PD T N
Sbjct: 174 ALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVN 233
Query: 177 ALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKTPEDAEVFFKKMR---EMG 233
A R+ +K+M A+ SL + N+ T+N L++G+ D E + +R E G
Sbjct: 234 AYCRSGNVDKAMVFAKETESSLGLEL--NVVTYNSLINGYAMIGDVEGMTRVLRLMSERG 291
Query: 234 VTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITY----------------- 276
V+ +VVTY SL+ YCK +E+A V + ++E+ L D Y
Sbjct: 292 VSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAV 351
Query: 277 ------------------TSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNF 318
S+I G GQ +A + M ++ PD YN + +
Sbjct: 352 RVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGY 411
Query: 319 CIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNT 378
C A + EA L D+M K + P TYN+ + + +++ M+ G + +
Sbjct: 412 CRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADE 471
Query: 379 QSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEK 434
SC L+ K A++LW +++ +G + T+ +V+ LC M K+ EA++
Sbjct: 472 ISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKE 527
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 133/333 (39%), Gaps = 50/333 (15%)
Query: 69 QVLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEAR 128
Q L + N + Y RKG F T +T++ + R N + DL+IE R
Sbjct: 545 QALSHGYYKVGNLKEAFAVKEYM-ERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELR 603
Query: 129 WKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSM 188
+ +TP TV A C++ ++ CF + EK +
Sbjct: 604 ARG---LTP-TVATYGALITGWCNI-----------GMIDKAYATCFEMI------EKGI 642
Query: 189 TDARNVYHSLKHQ-FRPN-----------LQTFNILLSGW---------------KTPED 221
T N+ + + FR + + F++LL G+ KT +
Sbjct: 643 TLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKI 702
Query: 222 AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERD-LSPDVITYTSII 280
AE + + P+ + YN + CK +LE A K+ ++ D PD TYT +I
Sbjct: 703 AESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILI 762
Query: 281 GGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLN 340
G + G +KA + EM G P++ YNA I+ C + A L+ ++ KG+
Sbjct: 763 HGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGIT 822
Query: 341 PNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLG 373
PNA TYN S ++ + + +M+ G
Sbjct: 823 PNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKG 855
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 128/296 (43%), Gaps = 13/296 (4%)
Query: 151 CSVRQTVEFFRRFKK-----LVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRP 204
C Q VE + F + L PD T +N L+ C+ + +A + + + + P
Sbjct: 377 CKSGQLVEAEQIFSRMNDWSLKPDHHT--YNTLVDGYCRAGYVDEALKLCDQMCQKEVVP 434
Query: 205 NLQTFNILLSGWK---TPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVL 261
+ T+NILL G+ D +K M + GV D ++ ++L++ K + +A K+
Sbjct: 435 TVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLW 494
Query: 262 DEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIA 321
+ + R L D IT +I GL + + ++A+++L + + C P V Y A +
Sbjct: 495 ENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKV 554
Query: 322 KRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSC 381
L+EA+ + + M KG+ P YN + L ++ + G P +
Sbjct: 555 GNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATY 614
Query: 382 MFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFL 437
LI + ++ A +M+EKG + + + L + K+ EA C L
Sbjct: 615 GALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEA--CLL 668
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 135/351 (38%), Gaps = 78/351 (22%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNV---------------YHSLKHQFR------------ 203
DT N ++ LC+ + + +A+ + Y +L H +
Sbjct: 505 DTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVK 564
Query: 204 ---------PNLQTFNILLSG---WKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKG 251
P ++ +N L+SG ++ ++R G+TP V TY +L+ +C
Sbjct: 565 EYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNI 624
Query: 252 RELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYG-------- 303
++KAY EM E+ ++ +V + I L + + D+A +L+++ ++
Sbjct: 625 GMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQS 684
Query: 304 ------------------------------CYPDVPAYNAAIRNFCIAKRLREAYDLV-D 332
P+ YN AI C A +L +A L D
Sbjct: 685 LKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSD 744
Query: 333 EMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQE 392
++S P+ TY + + D+ ++ + M G PN + LI+ K
Sbjct: 745 LLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLG 804
Query: 393 KVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKG 443
V+ A +L + +KG + + L D L G + EA + +MIEKG
Sbjct: 805 NVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKG 855
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 169/378 (44%), Gaps = 55/378 (14%)
Query: 95 KGFFHTAFSLDTMLYILGRSRMFN---HIWDLLIEARWKDQTLITPRTVMVVLARTAKVC 151
+G +T++ +L + +M + ++ ++E + T ++ +L ++
Sbjct: 299 EGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEY-TYSLLLNLLVAEGQLV 357
Query: 152 SVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-----KHQFRPNL 206
+ VE +R+ ++ L+RTL + +++A ++ + K + +
Sbjct: 358 RLDGVVEISKRY------MTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYM 411
Query: 207 QTFNILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRE 266
L KT E E+ K+ E GV D + YN++ K +++ + + ++M++
Sbjct: 412 SMLESLCGAGKTIEAIEML-SKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKK 470
Query: 267 RDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKR--L 324
SPD+ TY +I G VG+ D+A ++ +E++ C PD+ +YN+ I C+ K +
Sbjct: 471 DGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLIN--CLGKNGDV 528
Query: 325 REAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFL 384
EA+ EM KGLNP+ TY+ L
Sbjct: 529 DEAHVRFKEMQEKGLNPDVVTYST-----------------------------------L 553
Query: 385 IRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQ 444
+ F K E+VEMA L+ +M+ KG + ++L D L G+ EA + +M ++G
Sbjct: 554 MECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGL 613
Query: 445 KPSNVSFRRIKVLMELAN 462
P ++++ ++ L +++
Sbjct: 614 TPDSITYTVLERLQSVSH 631
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/416 (20%), Positives = 164/416 (39%), Gaps = 44/416 (10%)
Query: 101 AFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTL--ITPRTVMVVLARTAKVCSVRQTVE 158
+F+ +L RSR ++ +D+ E R L ++ LA+ K C V
Sbjct: 203 SFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKACQV----- 257
Query: 159 FFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNIL---LS 214
F KK D + ++RT+ + +A +++ + N+ +N L L+
Sbjct: 258 -FEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLA 316
Query: 215 GWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGREL-------------------- 254
K + A F +M E G P+ TY+ L+++ +L
Sbjct: 317 KGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYS 376
Query: 255 ------------EKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEY 302
+A+++ +M + + +Y S++ L G+ +A ++L ++ E
Sbjct: 377 YLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEK 436
Query: 303 GCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSS 362
G D YN K++ +DL ++M G +P+ TYN+ F ++ +
Sbjct: 437 GVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEA 496
Query: 363 WNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDL 422
N++ + C P+ S LI K V+ A + +M EKG + L +
Sbjct: 497 INIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMEC 556
Query: 423 LCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEALQNLTQKMAVFG 478
++ A F EM+ KG +P+ V++ + +E R +L KM G
Sbjct: 557 FGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQG 612
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 157/392 (40%), Gaps = 71/392 (18%)
Query: 156 TVEFFRRFKKLVP--DFDTNCFNALLRTLCQEK---SMTDARNVYHSL-KHQFRPNLQTF 209
VEFF+ L P D +N ++ L + R++ S+ K N+ T
Sbjct: 115 AVEFFKLVPSLCPYSQNDPFLYNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTV 174
Query: 210 NILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLV-------------DVYCK----GR 252
NIL+ + ED ++ + +++ + + TY L+ DVYC+ G
Sbjct: 175 NILIGFFGNTEDLQMCLRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGH 234
Query: 253 EL---------------EKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLK 297
+L EKA +V ++M++R D TYT +I +G +G+ D+A +
Sbjct: 235 KLDIFAYNMLLDALAKDEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFN 294
Query: 298 EMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSN 357
EM G +V YN ++ K + +A + M G PN TY+L +
Sbjct: 295 EMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEG 354
Query: 358 D---LQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDM----VEKGFG 410
L + R M G + +L+R K V A +L+ DM V+
Sbjct: 355 QLVRLDGVVEISKRYMTQGIYS------YLVRTLSKLGHVSEAHRLFCDMWSFPVKGERD 408
Query: 411 SYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPS----NVSFRRIKVLMELANRHEA 466
SY + + LC GK EA + ++ EKG N F + L ++++ H+
Sbjct: 409 SYM----SMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDL 464
Query: 467 LQNLTQK------------MAVFGRPVQVRES 486
+ + + +A FGR +V E+
Sbjct: 465 FEKMKKDGPSPDIFTYNILIASFGRVGEVDEA 496
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 110/458 (24%), Positives = 207/458 (45%), Gaps = 70/458 (15%)
Query: 18 PNLILSRLLSSTLNDGDVH-RVMTIITTTSSPE-----------NLRQSLKSSGVFLSNE 65
PN ++SRL+S +L + +TT S+ E NL + L S+ V L +
Sbjct: 2 PNSLISRLVSPSLRSQPSKISALRFLTTVSAAERLYGQLQGCTSNLEKELASANVQLDSS 61
Query: 66 LIDQVLKRVRFSHANPSQ---TLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWD 122
I++VL+R +P+Q L F+ + G H+A+ IL + R +
Sbjct: 62 CINEVLRR-----CDPNQFQSGLRFFIWAGTLSSHRHSAYMYTKACDIL-KIRAKPDLIK 115
Query: 123 LLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTL 182
+IE+ K++ + +T+ +VL + + + R+F + DT +N ++R
Sbjct: 116 YVIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLF 175
Query: 183 CQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKTPEDAEVFFKKMREMGVTPDVVTYN 242
+ + NI A++ K+M +G+ PDV+TY
Sbjct: 176 ADKGDL---------------------NI----------ADMLIKEMDCVGLYPDVITYT 204
Query: 243 SLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEM-KE 301
S+++ YC +++ A+++ EM + D + +TY+ I+ G+ G ++A ++L EM KE
Sbjct: 205 SMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKE 264
Query: 302 YG---CYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFR-IFYWSN 357
G P+ Y I+ FC +R+ EA ++D M ++G PN T + + +
Sbjct: 265 DGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDE 324
Query: 358 DLQSSWNMYHRMMGLG----CHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYT 413
D+++ + +++ LG + + + LIR+ K+ E+ E +L M+ +G
Sbjct: 325 DVKALSKLIDKLVKLGGVSLSECFSSATVSLIRM-KRWEEAEKIFRL---MLVRGVRPDG 380
Query: 414 LVSDVLFDLLCDMGKLGEAEKCFL--EMIEKGQKPSNV 449
L +F LC + + + CFL + IEK S +
Sbjct: 381 LACSHVFRELCLLERYLD---CFLLYQEIEKKDVKSTI 415
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 127/271 (46%), Gaps = 12/271 (4%)
Query: 199 KHQFRPNLQTFNILLS---GWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELE 255
K + N++T I+L+ ++A +K E V D V YN ++ ++ +L
Sbjct: 123 KEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLN 182
Query: 256 KAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAI 315
A ++ EM L PDVITYTS+I G G+ D A + KEM ++ C + Y+ +
Sbjct: 183 IADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRIL 242
Query: 316 RNFCIAKRLREAYDLVDEMTSKG----LNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMG 371
C + + A +L+ EM + ++PNA TY L + F ++ + + RM
Sbjct: 243 EGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGN 302
Query: 372 LGCHPN-TQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLG 430
GC PN +C+ + + + E V+ +L +V+ G S + L M +
Sbjct: 303 RGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWE 362
Query: 431 EAEKCFLEMIEKGQKPSNVS----FRRIKVL 457
EAEK F M+ +G +P ++ FR + +L
Sbjct: 363 EAEKIFRLMLVRGVRPDGLACSHVFRELCLL 393
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 5/224 (2%)
Query: 260 VLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFC 319
V++ R+ + +V T ++ D+A VL++ E+ D AYN IR F
Sbjct: 117 VIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFA 176
Query: 320 IAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQ 379
L A L+ EM GL P+ TY + + + +W + M C N+
Sbjct: 177 DKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSV 236
Query: 380 SCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLL----CDMGKLGEAEKC 435
+ ++ K +E AL+L +M ++ G + V + L+ C+ ++ EA
Sbjct: 237 TYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLV 296
Query: 436 FLEMIEKGQKPSNV-SFRRIKVLMELANRHEALQNLTQKMAVFG 478
M +G P+ V + I+ ++E +AL L K+ G
Sbjct: 297 LDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLG 340
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 130/286 (45%), Gaps = 20/286 (6%)
Query: 83 QTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLL--IEARWKDQTLITPRTV 140
+ LEF+ + GF H + M +L + F +WD L + R + ++T ++
Sbjct: 109 KALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASI 168
Query: 141 MVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLK- 199
++ + V++ + F R K+ D +N ++ LC+ + AR + ++
Sbjct: 169 TCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQL 228
Query: 200 --HQFRPNLQTFNILLSGW--------------KTPEDAEVFFKKMREMGVTPDVVTYNS 243
++ P+ T+ IL+S + + +A F++M G PDVVTYN
Sbjct: 229 PGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNC 288
Query: 244 LVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYG 303
L+D CK + +A ++ ++M+ + P+ +TY S I + + + A ++++ MK+ G
Sbjct: 289 LIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLG 348
Query: 304 -CYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNL 348
P Y I +R EA DLV EM GL P TY L
Sbjct: 349 HGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKL 394
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 99/219 (45%), Gaps = 20/219 (9%)
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDL--SPDVITYT 277
++A F +M+E PDV YN++++ C+ +KA +LD+M+ PD TYT
Sbjct: 182 KEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYT 241
Query: 278 SIIGGLGLVGQPDKARDVLK-----------EMKEYGCYPDVPAYNAAIRNFCIAKRLRE 326
+I G R ++ EM G PDV YN I C R+
Sbjct: 242 ILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGR 301
Query: 327 AYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCH--PNTQSCMFL 384
A +L ++M +KG PN TYN F R + +N+++ + M M LG H P + + L
Sbjct: 302 ALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLG-HGVPGSSTYTPL 360
Query: 385 IRLFKKQEKVEMALQLWGDMVEKGF----GSYTLVSDVL 419
I + + A L +MVE G +Y LV D L
Sbjct: 361 IHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDAL 399
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 116/284 (40%), Gaps = 32/284 (11%)
Query: 223 EVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGG 282
E FF G + +T + + KG + + + L ++ R+ +V+T SI
Sbjct: 112 EFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCL 171
Query: 283 LGLVGQPDKARDVLK---EMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
+ +G+ ++ L MKEY C PDV AYN I C ++A L+D+M G
Sbjct: 172 MKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGF 231
Query: 340 N--PNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMA 397
P+ TY + L SS+ Y M GC + M+ A
Sbjct: 232 RYPPDTYTYTI----------LISSYCRYG--MQTGCRKAIRRRMW------------EA 267
Query: 398 LQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVL 457
+++ +M+ +GF + + L D C ++G A + F +M KG P+ V++
Sbjct: 268 NRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRY 327
Query: 458 MELANRHEALQNLTQKMAVFGRPVQVRESRPVQVH---ESRESA 498
+ N E + + M G V + +H E+R +A
Sbjct: 328 YSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAA 371
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 107/470 (22%), Positives = 181/470 (38%), Gaps = 80/470 (17%)
Query: 44 TTSSPENLRQSLKSSGVFLSNEL--------IDQVLKRVRFSHANPSQT---------LE 86
+ SP NL+Q FLS EL I++ L S ++P + ++
Sbjct: 261 SAQSPVNLKQ-------FLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLID 313
Query: 87 FYRYTGR------------RKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTL 134
Y GR + G + +TM++ G + LL + K
Sbjct: 314 LYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKG--- 370
Query: 135 ITP--RTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDAR 192
I+P +T ++L+ A + +E++R+ +K+ DT A+L LCQ K + +
Sbjct: 371 ISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVE 430
Query: 193 NVYHSL-KHQFRPNLQTFNILLSGWKTP-------------------------------- 219
V + ++ R + + +++ +
Sbjct: 431 AVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYA 490
Query: 220 ------EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDV 273
E VF+ K G DV+ YN ++ Y K + EKA + M+ + PD
Sbjct: 491 EKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDE 550
Query: 274 ITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDE 333
TY S+ L V D+A+ +L EM + GC P Y A I ++ L +A DL +
Sbjct: 551 CTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEA 610
Query: 334 MTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEK 393
M G+ PN Y F S ++ + + M G N LI+ + K
Sbjct: 611 MEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGC 670
Query: 394 VEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKG 443
+E A +++ M + G S+ + L D+G + EAE F + EKG
Sbjct: 671 LEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKG 720
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/414 (21%), Positives = 172/414 (41%), Gaps = 10/414 (2%)
Query: 46 SSPENLRQSLKSSGVFLSNELIDQVLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLD 105
S E+L + ++ G+ + + +L + + LE+YR R+ G F +
Sbjct: 357 SEAESLLKKMEEKGISPDTKTYN-ILLSLHADAGDIEAALEYYRKI-RKVGLFPDTVTHR 414
Query: 106 TMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKK 165
+L+IL + +M + ++ E ++ I +V V++ V Q F RF+
Sbjct: 415 AVLHILCQRKMVAEVEAVIAEMD-RNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQ- 472
Query: 166 LVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQF--RPNLQTFNILLSGW---KTPE 220
L + A++ ++ +A V++ ++ R ++ +N+++ + K E
Sbjct: 473 LDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHE 532
Query: 221 DAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSII 280
A FK M+ G PD TYNSL + +++A ++L EM + P TY ++I
Sbjct: 533 KALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMI 592
Query: 281 GGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLN 340
+G A D+ + M++ G P+ Y + I F + + EA M G+
Sbjct: 593 ASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQ 652
Query: 341 PNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQL 400
N + + L+ + +Y +M P+ + ++ L V A +
Sbjct: 653 SNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESI 712
Query: 401 WGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
+ + EKG + +++ L MG L EA + EM E G SF ++
Sbjct: 713 FNALREKGTCDVISFATMMY-LYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQV 765
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 116/281 (41%), Gaps = 39/281 (13%)
Query: 153 VRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLK-HQFRPNLQTFNI 211
V + +++FR ++ + +L++ + + +AR VY +K + P++ N
Sbjct: 636 VEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNS 695
Query: 212 LLS---GWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERD 268
+LS +AE F +RE G T DV+++ +++ +Y L++A +V +EMRE
Sbjct: 696 MLSLCADLGIVSEAESIFNALREKG-TCDVISFATMMYLYKGMGMLDEAIEVAEEMRESG 754
Query: 269 LSPDVITYTSIIGGLGLVGQPDKARDVLKEMK-------EYGCYP---------DVP--- 309
L D ++ ++ GQ + ++ EM ++G + VP
Sbjct: 755 LLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEA 814
Query: 310 ------AYNAA--IRNFCIAKRLREAYDL-------VDEMTSKGLNPNATTYNLFFRIFY 354
AYN A + I L A L E+TS + YN +
Sbjct: 815 VSQLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYS 874
Query: 355 WSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVE 395
S D+ + Y RM G P+ + +L+ ++ K VE
Sbjct: 875 ASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVE 915
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 135/287 (47%), Gaps = 6/287 (2%)
Query: 168 PDFDTNCFNALLRTLCQEKSMTDARNVY-HSLKHQFRPNLQTFNILLSGWK---TPEDAE 223
P T N + +LC+ +++ A + ++ P++ T+N L+ G+ ++A
Sbjct: 9 PGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAY 68
Query: 224 VFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGL 283
++MRE G+ PDV TYNSL+ K L + ++ DEM LSPD+ +Y +++
Sbjct: 69 AVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCY 128
Query: 284 GLVGQPDKARDVLKE-MKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPN 342
+G+ +A +L E + G P + YN + C + A +L + S+ + P
Sbjct: 129 FKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPE 187
Query: 343 ATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWG 402
TYN+ S + S M + G PN + +++++ K +++E LQL+
Sbjct: 188 LMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFL 247
Query: 403 DMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNV 449
M ++G+ + + L G+ EA +C E++ G + ++
Sbjct: 248 KMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDI 294
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 137/289 (47%), Gaps = 11/289 (3%)
Query: 166 LVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGW---KTPEDA 222
LVP DT +N LL LC+ +A ++ LK + +P L T+NIL++G +
Sbjct: 150 LVPGIDT--YNILLDALCKSGHTDNAIELFKHLKSRVKPELMTYNILINGLCKSRRVGSV 207
Query: 223 EVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGG 282
+ +++++ G TP+ VTY +++ +Y K + +EK ++ +M++ + D +++
Sbjct: 208 DWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSA 267
Query: 283 LGLVGQPDKARDVLKEMKEYGCYP-DVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNP 341
L G+ ++A + + E+ G D+ +YN + + L DL++E+ KGL P
Sbjct: 268 LIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKP 327
Query: 342 NATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLW 401
+ T+ + + + + +G P+ +C LI K V+ A++L+
Sbjct: 328 DDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLF 387
Query: 402 GDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQK-PSNV 449
M + +YT V LC G+L A K L KG K PS+
Sbjct: 388 ASMEVRDEFTYTSV----VHNLCKDGRLVCASKLLLSCYNKGMKIPSSA 432
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 142/315 (45%), Gaps = 44/315 (13%)
Query: 175 FNALLRTLCQEKSMTDARNVYHS-LKHQFRPNLQTFNILLSG------------------ 215
+N ++ C++K+M AR V+ + L+ +PN T++IL+ G
Sbjct: 481 YNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMT 540
Query: 216 ---------------------WKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGREL 254
+T + E+ + E + ++YNS++D + K E+
Sbjct: 541 SSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEM 600
Query: 255 EKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAA 314
+ A +EM +SP+VITYTS++ GL + D+A ++ EMK G D+PAY A
Sbjct: 601 DSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGAL 660
Query: 315 IRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMM--GL 372
I FC + A L E+ +GLNP+ YN F ++ ++ ++Y +M+ GL
Sbjct: 661 IDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGL 720
Query: 373 GCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEA 432
C T + LI K + +A +L+ +M G ++ V+ + L G+ +
Sbjct: 721 RCDLGTYTT--LIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKV 778
Query: 433 EKCFLEMIEKGQKPS 447
K F EM + P+
Sbjct: 779 VKMFEEMKKNNVTPN 793
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 180/419 (42%), Gaps = 39/419 (9%)
Query: 66 LIDQVLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRS-RMFNHIWDLL 124
+ID +L R NP L FY + +G F +++IL S + DLL
Sbjct: 75 VIDVLLNR----RNNPEAALRFYNWARPWRGSFEDGDVFWVLIHILVSSPETYGRASDLL 130
Query: 125 IEARWKDQTLITPRTVMVV--LARTAKVCSV-----------------RQT---VEFFRR 162
I R+ + TP ++V L +AK RQT V+ +
Sbjct: 131 I--RYVSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQ 188
Query: 163 FKKL--VPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQF--RPNLQTFNILLSGWKT 218
+L +P F N L L Q S+T+A+ +Y + N+ T ++ + +
Sbjct: 189 MLELDVIPFFPY--VNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLRE 246
Query: 219 PEDAEVF--FKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLS-PDVIT 275
+ AE + E G PD + Y+ V CK +L A +L EM+E+ L P T
Sbjct: 247 EKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQET 306
Query: 276 YTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMT 335
YTS+I G D A + EM G +V A + I C L A L D+M
Sbjct: 307 YTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKME 366
Query: 336 SKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVE 395
+G +PN+ T+++ F + +++ + Y +M LG P+ +I+ + K +K E
Sbjct: 367 KEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHE 426
Query: 396 MALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
AL+L+ + E G + V + + LC GK EA + +M +G P+ VS+ +
Sbjct: 427 EALKLFDESFETGLAN-VFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNV 484
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 96/199 (48%), Gaps = 4/199 (2%)
Query: 155 QTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILL 213
Q +E K D + AL+ C+ +M A ++ L + P+ +N L+
Sbjct: 637 QALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLI 696
Query: 214 SGWKTPED---AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLS 270
SG++ + A +KKM + G+ D+ TY +L+D K L A ++ EM+ L
Sbjct: 697 SGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLV 756
Query: 271 PDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDL 330
PD I YT I+ GL GQ K + +EMK+ P+V YNA I L EA+ L
Sbjct: 757 PDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRL 816
Query: 331 VDEMTSKGLNPNATTYNLF 349
DEM KG+ P+ T+++
Sbjct: 817 HDEMLDKGILPDGATFDIL 835
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 139/323 (43%), Gaps = 48/323 (14%)
Query: 176 NALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSG---WKTPEDAEVFFKKMRE 231
N +L LC++ +A + ++ + PN+ ++N ++ G K + A + F + E
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE 506
Query: 232 MGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDK 291
G+ P+ TY+ L+D + + + A +V++ M ++ + + Y +II GL VGQ K
Sbjct: 507 KGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSK 566
Query: 292 ARDVLKEMKE------------------------------------YGCYPDVPAYNAAI 315
AR++L M E G P+V Y + +
Sbjct: 567 ARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLM 626
Query: 316 RNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCH 375
C R+ +A ++ DEM +KG+ + Y F ++++S+ ++ ++ G +
Sbjct: 627 NGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLN 686
Query: 376 PNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKG----FGSYTLVSDVLFDLLCDMGKLGE 431
P+ LI F+ + AL L+ M++ G G+YT L D L G L
Sbjct: 687 PSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYT----TLIDGLLKDGNLIL 742
Query: 432 AEKCFLEMIEKGQKPSNVSFRRI 454
A + + EM G P + + I
Sbjct: 743 ASELYTEMQAVGLVPDEIIYTVI 765
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 169/393 (43%), Gaps = 17/393 (4%)
Query: 69 QVLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILG-----RSRMFNHIWDL 123
Q+L R P++ LE R D++LY L ++ L
Sbjct: 237 QLLMRASLREEKPAEALEVLSRAIERGA------EPDSLLYSLAVQACCKTLDLAMANSL 290
Query: 124 LIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLC 183
L E + K + + T V+ + K ++ + + +L+ C
Sbjct: 291 LREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHC 350
Query: 184 QEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTP---EDAEVFFKKMREMGVTPDVV 239
+ + A ++ + K PN TF++L+ ++ E A F+KKM +G+TP V
Sbjct: 351 KNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVF 410
Query: 240 TYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEM 299
++++ + KG++ E+A K+ DE E L+ +V +I+ L G+ D+A ++L +M
Sbjct: 411 HVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKM 469
Query: 300 KEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDL 359
+ G P+V +YN + C K + A + + KGL PN TY++ + ++D
Sbjct: 470 ESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDE 529
Query: 360 QSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVS-DV 418
Q++ + + M N +I K + A +L +M+E+ + +S +
Sbjct: 530 QNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNS 589
Query: 419 LFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+ D G++ A + EM G P+ +++
Sbjct: 590 IIDGFFKEGEMDSAVAAYEEMCGNGISPNVITY 622
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 92/215 (42%), Gaps = 4/215 (1%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGW---KTPEDAEVFFKKMR 230
+ +L+ LC+ M A + +K++ + ++ + L+ G+ E A F ++
Sbjct: 622 YTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELL 681
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
E G+ P YNSL+ + + A + +M + L D+ TYT++I GL G
Sbjct: 682 EEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLI 741
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
A ++ EM+ G PD Y + + + + +EM + PN YN
Sbjct: 742 LASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVI 801
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLI 385
Y +L ++ ++ M+ G P+ + L+
Sbjct: 802 AGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 184/453 (40%), Gaps = 48/453 (10%)
Query: 69 QVLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEAR 128
VLK ++ S NP + R G+ H+A +L L +RM NH+ ++E
Sbjct: 12 HVLKLLK-SEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHV-SRIVELI 69
Query: 129 WKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKL---------------------- 166
+ + V+ K Q ++ F+R +++
Sbjct: 70 RSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQ 129
Query: 167 ----------------VPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTF 209
P+ T +N L++ C++K AR + K F+P++ ++
Sbjct: 130 WVKVESLFAYFETAGVAPNLQT--YNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSY 187
Query: 210 NILLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRE 266
+ +++ +DA F +M E GV PDV YN L+D + K ++ + A ++ D + E
Sbjct: 188 STVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLE 247
Query: 267 -RDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLR 325
+ P+V T+ +I GL G+ D + + MK+ D+ Y++ I C A +
Sbjct: 248 DSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVD 307
Query: 326 EAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLI 385
+A + +E+ + + + TYN F ++ S ++ R+M N S LI
Sbjct: 308 KAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW-RIMEHKNSVNIVSYNILI 366
Query: 386 RLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQK 445
+ + K++ A +W M KG+ + + LC G + +A E+ G
Sbjct: 367 KGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGH 426
Query: 446 PSNVSFRRIKVLMELANRHEALQNLTQKMAVFG 478
++ I + R E NL ++M+ G
Sbjct: 427 LDVYAYASIIDCLCKKKRLEEASNLVKEMSKHG 459
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 156/390 (40%), Gaps = 51/390 (13%)
Query: 129 WKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSM 188
WK+ + V+ AK + +E F + D C+N L+ +EK
Sbjct: 176 WKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDH 235
Query: 189 TDARNVYHSL--KHQFRPNLQTFNILLSGWKT---PEDAEVFFKKMREMGVTPDVVTYNS 243
A ++ L PN++T NI++SG +D +++M++ D+ TY+S
Sbjct: 236 KTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSS 295
Query: 244 LVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGL-------------------- 283
L+ C ++KA V +E+ ER S DV+TY +++GG
Sbjct: 296 LIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN 355
Query: 284 ------------GLV--GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYD 329
GL+ G+ D+A + + M G D Y I C+ + +A
Sbjct: 356 SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALG 415
Query: 330 LVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFK 389
++ E+ S G + + Y L+ + N+ M G N+ C LI
Sbjct: 416 VMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLI 475
Query: 390 KQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNV 449
+ ++ A +M + G + ++L LC GK GEA EM+E G KP
Sbjct: 476 RDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLK 535
Query: 450 SF----------RRIKVLMELANRHEALQN 469
++ R+I + +EL H+ LQ+
Sbjct: 536 TYSILLCGLCRDRKIDLALEL--WHQFLQS 563
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 125/284 (44%), Gaps = 3/284 (1%)
Query: 152 SVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNI 211
+V + F + D +N +L C+ + ++ ++ ++H+ N+ ++NI
Sbjct: 305 NVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNI 364
Query: 212 LLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERD 268
L+ G ++A + ++ M G D TY + C + KA V+ E+
Sbjct: 365 LIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSG 424
Query: 269 LSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAY 328
DV Y SII L + ++A +++KEM ++G + NA I RL EA
Sbjct: 425 GHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEAS 484
Query: 329 DLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLF 388
+ EM G P +YN+ + + M+ G P+ ++ L+
Sbjct: 485 FFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGL 544
Query: 389 KKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEA 432
+ K+++AL+LW ++ G + ++ ++L LC +GKL +A
Sbjct: 545 CRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDA 588
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 4/244 (1%)
Query: 170 FDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTPE---DAEVF 225
D + +++ LC++K + +A N+ + KH N N L+ G +A F
Sbjct: 427 LDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFF 486
Query: 226 FKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGL 285
++M + G P VV+YN L+ CK + +A + EM E PD+ TY+ ++ GL
Sbjct: 487 LREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCR 546
Query: 286 VGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATT 345
+ D A ++ + + G DV +N I C +L +A ++ M + N T
Sbjct: 547 DRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVT 606
Query: 346 YNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMV 405
YN F+ D + ++ M +G P+ S +++ V A++ + D
Sbjct: 607 YNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDAR 666
Query: 406 EKGF 409
G
Sbjct: 667 NHGI 670
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 95/181 (52%), Gaps = 4/181 (2%)
Query: 175 FNALLRTLCQEKSMTDARN-VYHSLKHQFRPNLQTFNILLSGW---KTPEDAEVFFKKMR 230
+N L+ LC+ +A V L++ ++P+L+T++ILL G + + A + +
Sbjct: 502 YNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFL 561
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
+ G+ DV+ +N L+ C +L+ A V+ M R+ + +++TY +++ G VG +
Sbjct: 562 QSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSN 621
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
+A + M + G PD+ +YN ++ C+ + + A + D+ + G+ P T+N+
Sbjct: 622 RATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
Query: 351 R 351
R
Sbjct: 682 R 682
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 109/242 (45%), Gaps = 21/242 (8%)
Query: 50 NLRQSLKSSGVFLS----NELIDQVLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLD 105
NL + + GV L+ N LI +++ R A+ F R G+ G T S +
Sbjct: 450 NLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASF-----FLREMGKN-GCRPTVVSYN 503
Query: 106 TMLYILGRSRMFNHIWDL---LIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRR 162
++ L ++ F ++E WK L T ++ L R K+ +E + +
Sbjct: 504 ILICGLCKAGKFGEASAFVKEMLENGWKPD-LKTYSILLCGLCRDRKI---DLALELWHQ 559
Query: 163 FKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKTPED 221
F + + D N L+ LC + DA V +++H+ NL T+N L+ G+ D
Sbjct: 560 FLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGD 619
Query: 222 ---AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTS 278
A V + M +MG+ PD+++YN+++ C R + A + D+ R + P V T+
Sbjct: 620 SNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNI 679
Query: 279 II 280
++
Sbjct: 680 LV 681
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 85/208 (40%)
Query: 217 KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITY 276
K E+A K+M + GV + N+L+ + L +A L EM + P V++Y
Sbjct: 443 KRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSY 502
Query: 277 TSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTS 336
+I GL G+ +A +KEM E G PD+ Y+ + C +++ A +L +
Sbjct: 503 NILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQ 562
Query: 337 KGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEM 396
GL + +N+ L + + M C N + L+ F K
Sbjct: 563 SGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNR 622
Query: 397 ALQLWGDMVEKGFGSYTLVSDVLFDLLC 424
A +WG M + G + + + LC
Sbjct: 623 ATVIWGYMYKMGLQPDIISYNTIMKGLC 650
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 122/246 (49%), Gaps = 5/246 (2%)
Query: 207 QTFNILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRE 266
Q++N +L ++ + +K++++ + TY+++VD C+ ++LE A L
Sbjct: 160 QSYNSVLYHFRETDKMWDVYKEIKD----KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEW 215
Query: 267 RDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLRE 326
+D+ P V+++ SI+ G +G D A+ + + G P V ++N I C+ + E
Sbjct: 216 KDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAE 275
Query: 327 AYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIR 386
A +L +M G+ P++ TYN+ + F+ + +W + M+ G P+ + L+
Sbjct: 276 ALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLC 335
Query: 387 LFKKQEKVEMALQLWGDMVEKGFGSYTLV-SDVLFDLLCDMGKLGEAEKCFLEMIEKGQK 445
+ ++M L L DM+ +GF +++ V+ LC G++ EA F +M G
Sbjct: 336 GQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLS 395
Query: 446 PSNVSF 451
P V++
Sbjct: 396 PDLVAY 401
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 101/200 (50%), Gaps = 18/200 (9%)
Query: 164 KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRP-NLQTFNILLSGWKTP--- 219
K+++P+ T+ ALL LCQ+ + +AR++ SL ++ +NI++ G+
Sbjct: 427 KRILPNSRTH--GALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 484
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
E+A FK + E G+TP V T+NSL+ YCK + + +A K+LD ++ L+P V++YT++
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDE------ 333
+ G ++ +EMK G P Y+ + C + ++ E
Sbjct: 545 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 604
Query: 334 ------MTSKGLNPNATTYN 347
M S+G+ P+ TYN
Sbjct: 605 KQGLRDMESEGIPPDQITYN 624
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 155/372 (41%), Gaps = 49/372 (13%)
Query: 127 ARWKDQTLITPRTVMV--VLARTAKVCSVRQTVEFFRRFKK--LVPDFDTNCFNALLRTL 182
+ WKD I P V +++ K+ V FF K LVP ++ N L+ L
Sbjct: 213 SEWKD---IGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSH--NILINGL 267
Query: 183 CQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTPEDAEVFFKKMREM---GVTPDV 238
C S+ +A + + KH P+ T+NIL G+ ++ +R+M G++PDV
Sbjct: 268 CLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDV 327
Query: 239 VTY------------------------------NSLVDV------YCKGRELEKAYKVLD 262
+TY NS++ CK +++A + +
Sbjct: 328 ITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFN 387
Query: 263 EMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAK 322
+M+ LSPD++ Y+ +I GL +G+ D A + EM + P+ + A + C
Sbjct: 388 QMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKG 447
Query: 323 RLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCM 382
L EA L+D + S G + YN+ + S ++ + ++ ++ G P+ +
Sbjct: 448 MLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFN 507
Query: 383 FLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEK 442
LI + K + + A ++ + G + L D + G ++ EM +
Sbjct: 508 SLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAE 567
Query: 443 GQKPSNVSFRRI 454
G P+NV++ I
Sbjct: 568 GIPPTNVTYSVI 579
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 122/246 (49%), Gaps = 5/246 (2%)
Query: 207 QTFNILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRE 266
Q++N +L ++ + +K++++ + TY+++VD C+ ++LE A L
Sbjct: 160 QSYNSVLYHFRETDKMWDVYKEIKD----KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEW 215
Query: 267 RDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLRE 326
+D+ P V+++ SI+ G +G D A+ + + G P V ++N I C+ + E
Sbjct: 216 KDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAE 275
Query: 327 AYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIR 386
A +L +M G+ P++ TYN+ + F+ + +W + M+ G P+ + L+
Sbjct: 276 ALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLC 335
Query: 387 LFKKQEKVEMALQLWGDMVEKGFGSYTLV-SDVLFDLLCDMGKLGEAEKCFLEMIEKGQK 445
+ ++M L L DM+ +GF +++ V+ LC G++ EA F +M G
Sbjct: 336 GQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLS 395
Query: 446 PSNVSF 451
P V++
Sbjct: 396 PDLVAY 401
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 101/200 (50%), Gaps = 18/200 (9%)
Query: 164 KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRP-NLQTFNILLSGWKTP--- 219
K+++P+ T+ ALL LCQ+ + +AR++ SL ++ +NI++ G+
Sbjct: 427 KRILPNSRTH--GALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 484
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
E+A FK + E G+TP V T+NSL+ YCK + + +A K+LD ++ L+P V++YT++
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDE------ 333
+ G ++ +EMK G P Y+ + C + ++ E
Sbjct: 545 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 604
Query: 334 ------MTSKGLNPNATTYN 347
M S+G+ P+ TYN
Sbjct: 605 KQGLRDMESEGIPPDQITYN 624
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 155/372 (41%), Gaps = 49/372 (13%)
Query: 127 ARWKDQTLITPRTVMV--VLARTAKVCSVRQTVEFFRRFKK--LVPDFDTNCFNALLRTL 182
+ WKD I P V +++ K+ V FF K LVP ++ N L+ L
Sbjct: 213 SEWKD---IGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSH--NILINGL 267
Query: 183 CQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTPEDAEVFFKKMREM---GVTPDV 238
C S+ +A + + KH P+ T+NIL G+ ++ +R+M G++PDV
Sbjct: 268 CLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDV 327
Query: 239 VTY------------------------------NSLVDV------YCKGRELEKAYKVLD 262
+TY NS++ CK +++A + +
Sbjct: 328 ITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFN 387
Query: 263 EMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAK 322
+M+ LSPD++ Y+ +I GL +G+ D A + EM + P+ + A + C
Sbjct: 388 QMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKG 447
Query: 323 RLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCM 382
L EA L+D + S G + YN+ + S ++ + ++ ++ G P+ +
Sbjct: 448 MLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFN 507
Query: 383 FLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEK 442
LI + K + + A ++ + G + L D + G ++ EM +
Sbjct: 508 SLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAE 567
Query: 443 GQKPSNVSFRRI 454
G P+NV++ I
Sbjct: 568 GIPPTNVTYSVI 579
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/412 (22%), Positives = 172/412 (41%), Gaps = 45/412 (10%)
Query: 103 SLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRR 162
S T+LY M L+ E D I T + + + ++ +F+R
Sbjct: 404 SYRTLLYAFSIRHMVEEAEGLIAEMD-DDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKR 462
Query: 163 FKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGW---KTP 219
F + + + ++A + + +++A V+ + + + +N+++ + K+
Sbjct: 463 FH-VAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSC 521
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
E A F+ M GVTPD TYN+LV + K L++MRE D I Y ++
Sbjct: 522 EKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAV 581
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
I +GQ + A +V KEM EY PDV Y I F +++A V+ M G+
Sbjct: 582 ISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGI 641
Query: 340 NPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGC----HPN--TQSCMF---------- 383
N+ YN +++ L + +Y +++ C +P+ T +CM
Sbjct: 642 PGNSVIYNSLIKLYTKVGYLDEAEAIYRKLL-QSCNKTQYPDVYTSNCMINLYSERSMVR 700
Query: 384 ----------------------LIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFD 421
++ ++KK + E A Q+ M E + L + +
Sbjct: 701 KAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLG 760
Query: 422 LLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI-KVLMELANRHEALQNLTQ 472
L G+ EA + F EM+ G +P + +F+ + +LM+L +A++ + +
Sbjct: 761 LFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEE 812
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/385 (18%), Positives = 150/385 (38%), Gaps = 44/385 (11%)
Query: 139 TVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNC------FNALLRTLCQEKSMTDAR 192
T +VL K ++ EFF+++ D++ +N ++ T + + +A
Sbjct: 259 TTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEAS 318
Query: 193 NVYHS-LKHQFRPNLQTFNILLSGWKTPEDAEVFFKKMREMGV--TPDVVTYNSLVDVYC 249
+ L+ P TFN ++ + M+ M + PD TYN L+ ++
Sbjct: 319 ETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPDTRTYNILISLHT 378
Query: 250 KGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVP 309
K ++E+A EM++ L PD ++Y +++ + ++A ++ EM + D
Sbjct: 379 KNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEY 438
Query: 310 AYNAAIRNFCIAKRLREAYD------LVDEMTSKGLNPN--------------------- 342
+A R + A+ L +++ + M+S+G + N
Sbjct: 439 TQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQ 498
Query: 343 ------ATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEM 396
YN+ + + S + + ++ MM G P+ + L+++ +
Sbjct: 499 EVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHK 558
Query: 397 ALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFR-RIK 455
M E G+ S + + +G+L AE+ + EM+E +P V + I
Sbjct: 559 GRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLIN 618
Query: 456 VLMELANRHEALQNLTQKMAVFGRP 480
+ N +A+ + + M G P
Sbjct: 619 AFADTGNVQQAM-SYVEAMKEAGIP 642
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 96/230 (41%), Gaps = 30/230 (13%)
Query: 199 KHQFRPNLQTFNILL------SGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGR 252
K + N+ +NI+L W+ + + +M G+ P TY +L+DVY KG
Sbjct: 180 KGCYELNVIHYNIMLRILGKACKWRY---VQSLWDEMIRKGIKPINSTYGTLIDVYSKGG 236
Query: 253 ELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQP-DKARDVLKE---MKEYGCYPDV 308
A L +M + + PD +T G+V Q KAR+ K K++ C +
Sbjct: 237 LKVHALCWLGKMSKIGMQPDEVT-------TGIVLQMYKKAREFQKAEEFFKKWSCDENK 289
Query: 309 P---------AYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDL 359
YN I + + +++EA + M +G+ P T+N I Y +N
Sbjct: 290 ADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHI-YGNNGQ 348
Query: 360 QSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGF 409
+ M L C P+T++ LI L K +E A + +M + G
Sbjct: 349 LGEVTSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGL 398
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 9/170 (5%)
Query: 290 DKARDVLKEMKEYGCYP-DVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNL 348
++A ++ + K GCY +V YN +R A + R L DEM KG+ P +TY
Sbjct: 168 ERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGT 227
Query: 349 FFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQ---EKVEMALQLWGDMV 405
++ + +M +G P+ + +++++KK +K E + W
Sbjct: 228 LIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKW-SCD 286
Query: 406 EKGFGSYTLVSDVLFDLLCDM----GKLGEAEKCFLEMIEKGQKPSNVSF 451
E S+ +S ++ + D G++ EA + F M+E+G P+ V+F
Sbjct: 287 ENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTF 336
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 71/139 (51%), Gaps = 9/139 (6%)
Query: 168 PD-FDTNCFNALLRTLCQEKSMT-DARNVYHSLKHQFRPNLQTFNILLSGWKTP---EDA 222
PD + +NC + L E+SM A ++ S+K + N TF ++L +K E+A
Sbjct: 681 PDVYTSNC----MINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEA 736
Query: 223 EVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGG 282
K+MREM + D ++YNS++ ++ ++A + EM + PD T+ S+
Sbjct: 737 TQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTI 796
Query: 283 LGLVGQPDKARDVLKEMKE 301
L +G KA ++E+++
Sbjct: 797 LMKLGMSKKAVRKIEEIRK 815
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 134/281 (47%), Gaps = 6/281 (2%)
Query: 168 PDFDTNCFNALLRTLCQEKSMTD-ARNVYHSL-KHQFRPNLQTFNILLSGWKTPED---A 222
PD + F A L + +M D + V+ L K + +++ N LL +D A
Sbjct: 111 PDLKSERFAAHAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEA 170
Query: 223 EVFFKKMREM-GVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIG 281
+ + +M +M G+ PD+ TYN ++ V+C+ +Y ++ EM + + P+ ++ +I
Sbjct: 171 KRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMIS 230
Query: 282 GLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNP 341
G + D+ VL MK+ G V YN I++ C K+ +EA L+D M S G+ P
Sbjct: 231 GFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKP 290
Query: 342 NATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLW 401
N TY+ F +D + + ++ M+ GC P+++ LI K E AL L
Sbjct: 291 NTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLC 350
Query: 402 GDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEK 442
+ +EK + + L + L K+ EA++ ++ EK
Sbjct: 351 KESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEK 391
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 1/203 (0%)
Query: 247 VYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEM-KEYGCY 305
+Y + L+ + +V ++ + ++S V + +++ + +A+ V EM K YG
Sbjct: 125 LYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIE 184
Query: 306 PDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNM 365
PD+ YN I+ FC + +Y +V EM KG+ PN++++ L FY + +
Sbjct: 185 PDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKV 244
Query: 366 YHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCD 425
M G + + I+ K++K + A L M+ G T+ L C+
Sbjct: 245 LAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCN 304
Query: 426 MGKLGEAEKCFLEMIEKGQKPSN 448
EA+K F M+ +G KP +
Sbjct: 305 EDDFEEAKKLFKIMVNRGCKPDS 327
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 108/250 (43%), Gaps = 10/250 (4%)
Query: 213 LSGWKTPEDAEVFFKKMREMGVTPDV----VTYNSLVDVYCKGRELEKAYKVLDEMRERD 268
LS K+ +D + + R +TPD + +++ V+ + + +LD E
Sbjct: 51 LSLLKSEKDPDRILEICRAASLTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIEN- 109
Query: 269 LSPDVITYTSIIGGLGLVGQP---DKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLR 325
PD+ + + L Q D + V ++++++ V + NA + +AK +
Sbjct: 110 -RPDLKSERFAAHAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYK 168
Query: 326 EAYDLVDEMTSK-GLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFL 384
EA + EM G+ P+ TYN ++F S SS+++ M G PN+ S +
Sbjct: 169 EAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLM 228
Query: 385 IRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQ 444
I F ++K + ++ M ++G ++ LC K EA+ M+ G
Sbjct: 229 ISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGM 288
Query: 445 KPSNVSFRRI 454
KP+ V++ +
Sbjct: 289 KPNTVTYSHL 298
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 108/232 (46%), Gaps = 35/232 (15%)
Query: 221 DAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSII 280
+A+ F +M E G+ P+V+TYN ++D +C A ++L M E+ ++PD++T++++I
Sbjct: 28 NAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALI 87
Query: 281 GGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLN 340
+ +A ++ KEM + +P YN+ I FC R+ +A ++D M SKG +
Sbjct: 88 NAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCS 147
Query: 341 PNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQL 400
P+ T++ LI + K ++V+ +++
Sbjct: 148 PDVVTFST-----------------------------------LINGYCKAKRVDNGMEI 172
Query: 401 WGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFR 452
+ +M +G + T+ L C +G L A+ EMI G P ++F
Sbjct: 173 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFH 224
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 97/175 (55%), Gaps = 6/175 (3%)
Query: 164 KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHS-LKHQFRPNLQTFNILLSGW---KTP 219
K++ PD T F+AL+ +E+ +++A +Y L+ P T+N ++ G+
Sbjct: 74 KQINPDIVT--FSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRV 131
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
+DA+ M G +PDVVT+++L++ YCK + ++ ++ EM R + + +TYT++
Sbjct: 132 DDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTL 191
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEM 334
I G VG D A+D+L EM G PD ++ + C K LR+A+ +++++
Sbjct: 192 IHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 75/131 (57%), Gaps = 4/131 (3%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGW---KTPEDAEVFFKKMR 230
+N+++ C++ + DA+ + S+ + P++ TF+ L++G+ K ++ F +M
Sbjct: 118 YNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 177
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
G+ + VTY +L+ +C+ +L+ A +L+EM ++PD IT+ ++ GL +
Sbjct: 178 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELR 237
Query: 291 KARDVLKEMKE 301
KA +L+++++
Sbjct: 238 KAFAILEDLQK 248
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 150/342 (43%), Gaps = 16/342 (4%)
Query: 134 LITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARN 193
+I+ +M R K C+ + + FRR + P+ + +L+T + +A
Sbjct: 174 VISYTALMESYGRGGK-CNNAEAI--FRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEE 230
Query: 194 VYHSL----KHQFRPNLQTFNILLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVD 246
V+ +L K +P+ + +++++ +K E A F M GV VTYNSL+
Sbjct: 231 VFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS 290
Query: 247 VYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYP 306
+E+ K Y D+M+ D+ PDV++Y +I G + ++A V +EM + G P
Sbjct: 291 FETSYKEVSKIY---DQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRP 347
Query: 307 DVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMY 366
AYN + F I+ + +A + M + P+ +Y + ++D++ + +
Sbjct: 348 THKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFF 407
Query: 367 HRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDM 426
R+ G PN + LI+ + K VE ++++ M G + + + D
Sbjct: 408 KRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRC 467
Query: 427 GKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEALQ 468
G A + EM G P + VL+ LA+ + L+
Sbjct: 468 KNFGSALGWYKEMESCGVPPDQ---KAKNVLLSLASTQDELE 506
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 125/303 (41%), Gaps = 1/303 (0%)
Query: 133 TLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDAR 192
+ IT + ++ K + E KK D ++ ++ + + AR
Sbjct: 208 SAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKAR 267
Query: 193 NVYHSLKHQFRP-NLQTFNILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKG 251
V+ S+ + P + T+N L+S + ++ + +M+ + PDVV+Y L+ Y +
Sbjct: 268 KVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRA 327
Query: 252 RELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAY 311
R E+A V +EM + + P Y ++ + G ++A+ V K M+ +PD+ +Y
Sbjct: 328 RREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSY 387
Query: 312 NAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMG 371
+ + A + A + G PN TY + + +ND++ +Y +M
Sbjct: 388 TTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRL 447
Query: 372 LGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGE 431
G N ++ + + AL + +M G +VL L +L E
Sbjct: 448 SGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEE 507
Query: 432 AEK 434
A++
Sbjct: 508 AKE 510
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 4/161 (2%)
Query: 174 CFNALLRTLCQEKSMTDARNVYHSLKH-QFRPNLQTFNILLSGWKTPED---AEVFFKKM 229
+N LL + A+ V+ S++ + P+L ++ +LS + D AE FFK++
Sbjct: 351 AYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRI 410
Query: 230 REMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQP 289
+ G P++VTY +L+ Y K ++EK +V ++MR + + T+I+ G
Sbjct: 411 KVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNF 470
Query: 290 DKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDL 330
A KEM+ G PD A N + L EA +L
Sbjct: 471 GSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 511
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 95/221 (42%), Gaps = 6/221 (2%)
Query: 222 AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIG 281
AE + +MG TP+V++Y +L++ Y +G + A + M+ P ITY I+
Sbjct: 158 AERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILK 217
Query: 282 GLGLVGQPDKARDVLKEM---KEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKG 338
+ +A +V + + K+ PD Y+ I + A +A + M KG
Sbjct: 218 TFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKG 277
Query: 339 LNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMAL 398
+ + TYN + + + +Y +M P+ S LI+ + + + E AL
Sbjct: 278 VPQSTVTYN---SLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEAL 334
Query: 399 QLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEM 439
++ +M++ G ++L D G + +A+ F M
Sbjct: 335 SVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 375
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 150/323 (46%), Gaps = 11/323 (3%)
Query: 139 TVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL 198
T+M L + ++ VR ++ + LVPD T +N L+ L + +A
Sbjct: 352 TIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVT--YNTLIHMLTKHDHADEALWFLKDA 409
Query: 199 KHQ-FRPNLQTFNILLSGW----KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRE 253
+ + FR + ++ ++ + E ++ + + + PDVVTY ++V+ +C+ E
Sbjct: 410 QEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGE 469
Query: 254 LEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNA 313
++KA K+L M P+ ++YT+++ G+ G+ +AR+++ +E+ P+ Y+
Sbjct: 470 VDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSV 529
Query: 314 AIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLG 373
+ +L EA D+V EM KG P NL + + + G
Sbjct: 530 IMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKG 589
Query: 374 CHPNTQSCMFLIRLFKKQEKVEMALQLWGDM--VEKGFGSYTLVSDVLFDLLCDMGKLGE 431
C N + +I F + ++++ AL + DM + K +T + L D L G++ E
Sbjct: 590 CAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTT--LVDTLGKKGRIAE 647
Query: 432 AEKCFLEMIEKGQKPSNVSFRRI 454
A + +M+ KG P+ V++R +
Sbjct: 648 ATELMKKMLHKGIDPTPVTYRTV 670
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 146/303 (48%), Gaps = 8/303 (2%)
Query: 170 FDTNCFNALLRTLCQEKSMTDARNVYHSL--KHQFRPNLQTFNILLSGW---KTPEDAEV 224
D ++A++ LC+E M++A+++ + + K P++ T+ +++G+ + A+
Sbjct: 416 IDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKK 475
Query: 225 FFKKMREMGVTPDVVTYNSLVDVYCK-GRELEKAYKVLDEMRERDLSPDVITYTSIIGGL 283
+ M G P+ V+Y +L++ C+ G+ LE A ++++ E SP+ ITY+ I+ GL
Sbjct: 476 LLQVMHTHGHKPNTVSYTALLNGMCRTGKSLE-AREMMNMSEEHWWSPNSITYSVIMHGL 534
Query: 284 GLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNA 343
G+ +A DV++EM G +P N +++ C R EA ++E +KG N
Sbjct: 535 RREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINV 594
Query: 344 TTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGD 403
+ F +++L ++ ++ M + H + + L+ K+ ++ A +L
Sbjct: 595 VNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKK 654
Query: 404 MVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANR 463
M+ KG + + C MGK+ + +MI + QK + + I+ L L
Sbjct: 655 MLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISR-QKCRTIYNQVIEKLCVLGKL 713
Query: 464 HEA 466
EA
Sbjct: 714 EEA 716
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 36/230 (15%)
Query: 221 DAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSII 280
DA M+ GV P+++ N+ +DV+ + LEKA + L+ M+ + P+V+TY +I
Sbjct: 260 DALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMI 319
Query: 281 GGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSK-GL 339
G + + ++A ++L++M GC PD +Y + C KR+ E DL+ +M + GL
Sbjct: 320 RGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGL 379
Query: 340 NPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQ 399
P+ TYN LI + K + + AL
Sbjct: 380 VPDQVTYNT-----------------------------------LIHMLTKHDHADEALW 404
Query: 400 LWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNV 449
D EKGF L + LC G++ EA+ EM+ KG P +V
Sbjct: 405 FLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDV 454
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/406 (18%), Positives = 161/406 (39%), Gaps = 42/406 (10%)
Query: 78 HANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITP 137
H + + L F + + KGF +++ L + + DL+ E K
Sbjct: 396 HDHADEALWFLK-DAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDV 454
Query: 138 RTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYH- 196
T V+ ++ V + + + +T + ALL +C+ +AR + +
Sbjct: 455 VTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNM 514
Query: 197 SLKHQFRPNLQTFNILLSGWKTP------------------------------------- 219
S +H + PN T+++++ G +
Sbjct: 515 SEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGR 574
Query: 220 -EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTS 278
+A F ++ G +VV + +++ +C+ EL+ A VLD+M + DV TYT+
Sbjct: 575 THEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTT 634
Query: 279 IIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKG 338
++ LG G+ +A +++K+M G P Y I +C ++ + ++++M S+
Sbjct: 635 LVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISR- 693
Query: 339 LNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMAL 398
T YN L+ + + +++ + ++C L+ + K+ A
Sbjct: 694 -QKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAY 752
Query: 399 QLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQ 444
++ M + + + L L GK+ EA+K L ++E+G
Sbjct: 753 KVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGH 798
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 124/290 (42%), Gaps = 17/290 (5%)
Query: 176 NALLRTLCQEKSMTDARNVYHSLK-HQFRPNLQTFNILLSGWKTPEDAEVFFKKMREM-- 232
N ++ LC+ M +A ++ + + + PNL T+ I L + A+ FK +
Sbjct: 612 NIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLS 671
Query: 233 -GVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDK 291
G+ YN+L+ CK +KA V+ +M R PD +T+ S++ G + K
Sbjct: 672 YGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRK 731
Query: 292 ARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFR 351
A M E G P+V YN IR A ++E + EM S+G+ P+ TYN
Sbjct: 732 ALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALIS 791
Query: 352 IFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGS 411
+++ S +Y M+ G P T + LI F K+ A +L +M ++G
Sbjct: 792 GQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSP 851
Query: 412 YTLVSDVLFDLLCDMGK------------LGEAEKCFLEMI-EKGQKPSN 448
T + LC + L EA+ EM+ EKG P N
Sbjct: 852 NTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYIPCN 901
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 121/301 (40%), Gaps = 42/301 (13%)
Query: 179 LRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKTPEDAEVFFKKMREMGVTPDV 238
L +C + D+R +++SL HQF N + + + KM GV+PDV
Sbjct: 81 LSAMCTFGVVPDSR-LWNSLIHQFNVN----------GLVHDQVSLIYSKMIACGVSPDV 129
Query: 239 VTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKE 298
N L+ +CK L A +L R R +S D +TY ++I GL G D+A L E
Sbjct: 130 FALNVLIHSFCKVGRLSFAISLL---RNRVISIDTVTYNTVISGLCEHGLADEAYQFLSE 186
Query: 299 MKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDE------------------------- 333
M + G PD +YN I FC A LVDE
Sbjct: 187 MVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEA 246
Query: 334 ---MTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKK 390
M G +P+ T++ + + M + +PN + L+ K
Sbjct: 247 YRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFK 306
Query: 391 QEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVS 450
AL L+ MV +G +V VL D L G L EAEK F ++E Q P+ V+
Sbjct: 307 ANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVT 366
Query: 451 F 451
+
Sbjct: 367 Y 367
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 148/333 (44%), Gaps = 41/333 (12%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSLKHQFR-PNLQTFNILLSGWKTPED---AEVFF 226
D + L+ L + + +A + L + PN+ T+ L+ G D AE
Sbjct: 328 DLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFII 387
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
+M E V P+VVTY+S+++ Y K LE+A +L +M ++++ P+ TY ++I GL
Sbjct: 388 TQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKA 447
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
G+ + A ++ KEM+ G + +A + + R++E LV +M SKG+ + Y
Sbjct: 448 GKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINY 507
Query: 347 NLFFRIFYWSNDLQS------------------SWNM----------------YHRMMGL 372
+F+ D ++ S+N+ Y M
Sbjct: 508 TSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREK 567
Query: 373 GCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEA 432
G P+ + ++ +KQ E L+LW M G + +++ +LC+ GK+ EA
Sbjct: 568 GIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEA 627
Query: 433 EKCFLEMIEKGQKPSNVSFRRIKVLMELANRHE 465
+M+ P+ ++R + ++ +++H+
Sbjct: 628 IHILNQMMLMEIHPNLTTYR---IFLDTSSKHK 657
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 113/254 (44%), Gaps = 5/254 (1%)
Query: 202 FRPNLQTF----NILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKA 257
F P++ TF N L G K E + ++M EM V P+ VTY +LVD K A
Sbjct: 255 FDPDVVTFSSIINRLCKGGKVLEGG-LLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHA 313
Query: 258 YKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRN 317
+ +M R + D++ YT ++ GL G +A K + E P+V Y A +
Sbjct: 314 LALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDG 373
Query: 318 FCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPN 377
C A L A ++ +M K + PN TY+ + L+ + ++ +M PN
Sbjct: 374 LCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPN 433
Query: 378 TQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFL 437
+ +I K K EMA++L +M G + D L + L +G++ E +
Sbjct: 434 GFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVK 493
Query: 438 EMIEKGQKPSNVSF 451
+M+ KG +++
Sbjct: 494 DMVSKGVTLDQINY 507
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 87/176 (49%), Gaps = 4/176 (2%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGW---KTPEDAEVFFKKMR 230
+N L+ TLC+ A V ++ + F P+ TFN L+ G+ A + M
Sbjct: 681 YNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMM 740
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
E G++P+V TYN+++ +++ K L EM+ R + PD TY ++I G +G
Sbjct: 741 EAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMK 800
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
+ + EM G P YN I F ++ +A +L+ EM +G++PN +TY
Sbjct: 801 GSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTY 856
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 112/260 (43%), Gaps = 8/260 (3%)
Query: 169 DFDTNCFNALLRTLCQEKSMTDARNVYHSLKH-QFRPNLQTFNILLSGW---KTPEDAEV 224
D D F++++ LC+ + + + ++ PN T+ L+ A
Sbjct: 256 DPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALA 315
Query: 225 FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLG 284
+ +M G+ D+V Y L+D K +L +A K + E + P+V+TYT+++ GL
Sbjct: 316 LYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLC 375
Query: 285 LVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNAT 344
G A ++ +M E P+V Y++ I + L EA L+ +M + + PN
Sbjct: 376 KAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGF 435
Query: 345 TYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDM 404
TY + + + + + M +G N L+ K+ +++ L DM
Sbjct: 436 TYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDM 495
Query: 405 VEKGFG----SYTLVSDVLF 420
V KG +YT + DV F
Sbjct: 496 VSKGVTLDQINYTSLIDVFF 515
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 124/301 (41%), Gaps = 39/301 (12%)
Query: 205 NLQTFNILLSGWKT--PEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLD 262
++ ++N+L+SG A+ +K MRE G+ PD+ T+N +++ K + E K+ D
Sbjct: 538 DVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWD 597
Query: 263 EMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVP------------- 309
+M+ + P +++ ++G L G+ ++A +L +M +P++
Sbjct: 598 KMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHK 657
Query: 310 ----------------------AYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYN 347
YN I C ++A ++ +M ++G P+ T+N
Sbjct: 658 RADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFN 717
Query: 348 LFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEK 407
++ + ++ + + Y MM G PN + +IR ++ + +M +
Sbjct: 718 SLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSR 777
Query: 408 GFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEAL 467
G + L +G + + + EMI G P ++ + + E AN + L
Sbjct: 778 GMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVL--ISEFANVGKML 835
Query: 468 Q 468
Q
Sbjct: 836 Q 836
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 150/342 (43%), Gaps = 16/342 (4%)
Query: 134 LITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARN 193
+I+ +M R K C+ + + FRR + P+ + +L+T + +A
Sbjct: 181 VISYTALMESYGRGGK-CNNAEAI--FRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEE 237
Query: 194 VYHSL----KHQFRPNLQTFNILLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVD 246
V+ +L K +P+ + +++++ +K E A F M GV VTYNSL+
Sbjct: 238 VFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS 297
Query: 247 VYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYP 306
+E+ K Y D+M+ D+ PDV++Y +I G + ++A V +EM + G P
Sbjct: 298 FETSYKEVSKIY---DQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRP 354
Query: 307 DVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMY 366
AYN + F I+ + +A + M + P+ +Y + ++D++ + +
Sbjct: 355 THKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFF 414
Query: 367 HRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDM 426
R+ G PN + LI+ + K VE ++++ M G + + + D
Sbjct: 415 KRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRC 474
Query: 427 GKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEALQ 468
G A + EM G P + VL+ LA+ + L+
Sbjct: 475 KNFGSALGWYKEMESCGVPPDQ---KAKNVLLSLASTQDELE 513
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 114/265 (43%), Gaps = 1/265 (0%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRP-NLQTFNILLSGWKTPEDAEVFFKKM 229
D ++ ++ + + AR V+ S+ + P + T+N L+S + ++ + +M
Sbjct: 253 DQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQM 312
Query: 230 REMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQP 289
+ + PDVV+Y L+ Y + R E+A V +EM + + P Y ++ + G
Sbjct: 313 QRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMV 372
Query: 290 DKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLF 349
++A+ V K M+ +PD+ +Y + + A + A + G PN TY
Sbjct: 373 EQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTL 432
Query: 350 FRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGF 409
+ + +ND++ +Y +M G N ++ + + AL + +M G
Sbjct: 433 IKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGV 492
Query: 410 GSYTLVSDVLFDLLCDMGKLGEAEK 434
+VL L +L EA++
Sbjct: 493 PPDQKAKNVLLSLASTQDELEEAKE 517
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 4/161 (2%)
Query: 174 CFNALLRTLCQEKSMTDARNVYHSLKH-QFRPNLQTFNILLSGWKTPED---AEVFFKKM 229
+N LL + A+ V+ S++ + P+L ++ +LS + D AE FFK++
Sbjct: 358 AYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRI 417
Query: 230 REMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQP 289
+ G P++VTY +L+ Y K ++EK +V ++MR + + T+I+ G
Sbjct: 418 KVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNF 477
Query: 290 DKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDL 330
A KEM+ G PD A N + L EA +L
Sbjct: 478 GSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 518
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 95/221 (42%), Gaps = 6/221 (2%)
Query: 222 AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIG 281
AE + +MG TP+V++Y +L++ Y +G + A + M+ P ITY I+
Sbjct: 165 AERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILK 224
Query: 282 GLGLVGQPDKARDVLKEM---KEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKG 338
+ +A +V + + K+ PD Y+ I + A +A + M KG
Sbjct: 225 TFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKG 284
Query: 339 LNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMAL 398
+ + TYN + + + +Y +M P+ S LI+ + + + E AL
Sbjct: 285 VPQSTVTYN---SLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEAL 341
Query: 399 QLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEM 439
++ +M++ G ++L D G + +A+ F M
Sbjct: 342 SVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 382
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 118/269 (43%), Gaps = 32/269 (11%)
Query: 213 LSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPD 272
LS E+A ++M++ G+ PDV+ Y +L+D YC ++ A ++DEM +SPD
Sbjct: 398 LSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPD 457
Query: 273 VITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVD 332
+ITY ++ GL G ++ ++ + MK G P+ + I C A++++EA D
Sbjct: 458 LITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFS 517
Query: 333 EMTSK---------------GLNPNATTYNLFFRIFY---------------WSNDLQSS 362
+ K GL+ A Y F R+ Y L+ +
Sbjct: 518 SLEQKCPENKASFVKGYCEAGLSKKA--YKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKA 575
Query: 363 WNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDL 422
++ +M P C +I F K V A L+ MVE+G ++
Sbjct: 576 HDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHT 635
Query: 423 LCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
C + +L +AE F +M ++G KP V++
Sbjct: 636 YCRLNELQKAESLFEDMKQRGIKPDVVTY 664
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 156/384 (40%), Gaps = 55/384 (14%)
Query: 121 WDLLIEA-----RWKDQTLITPRTVM-VVLARTAKVCSVRQTVEFFRRFKK--LVPDFDT 172
D+ +EA ++D + R V +K+ V + E + K +VPD
Sbjct: 366 MDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVIN 425
Query: 173 NCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGW-KTPEDAEVF--FKK 228
+ L+ C + + DA ++ + + P+L T+N+L+SG + + EV +++
Sbjct: 426 --YTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYER 483
Query: 229 MREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMR---------------ERDLSPDV 273
M+ G P+ VT + +++ C R++++A + E LS
Sbjct: 484 MKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKA 543
Query: 274 I-------------TYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCI 320
Y + L + G +KA DVLK+M Y P I FC
Sbjct: 544 YKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCK 603
Query: 321 AKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQS 380
+REA L D M +GL P+ TY + + N+LQ + +++ M G P+ +
Sbjct: 604 LNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVT 663
Query: 381 CMFLI-RLFKKQEKVEMALQLWGDMVEK------------GFGSYTLVSDVLFDLLCDMG 427
L+ R K + + G++ ++ G G + VL D C M
Sbjct: 664 YTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMN 723
Query: 428 KLGEAEKCFLEMIEKGQKPSNVSF 451
L +A + F MI+ G +P V++
Sbjct: 724 NLEQAAELFDRMIDSGLEPDMVAY 747
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 103/235 (43%), Gaps = 6/235 (2%)
Query: 178 LLRTLCQEKSMTDARNVYHSLKH-----QFRPNLQTFNILLSGWKTPEDAEVFFKKMREM 232
++R C E M A +V ++ L + PE A F KM
Sbjct: 289 VVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPE-ALGFLDKMLGK 347
Query: 233 GVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKA 292
G+ + V + ++ YCK +A + E R+ ++ D + Y L +G+ ++A
Sbjct: 348 GLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEA 407
Query: 293 RDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRI 352
++L+EMK+ G PDV Y I +C+ ++ +A DL+DEM G++P+ TYN+
Sbjct: 408 FELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSG 467
Query: 353 FYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEK 407
+ + +Y RM G PN + +I KV+ A + + +K
Sbjct: 468 LARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQK 522
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 19/222 (8%)
Query: 151 CSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLK-HQFRPNLQTF 209
C + + ++ F +L + + L +LC E + A +V + ++ P
Sbjct: 535 CEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMC 594
Query: 210 NILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRE 266
++ + +A+V F M E G+ PD+ TY ++ YC+ EL+KA + ++M++
Sbjct: 595 GKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQ 654
Query: 267 RDLSPDVITYTSIIGGL--------------GLVGQPDKARDVLKEMKEYGCYPDVPAYN 312
R + PDV+TYT ++ G VG+ KA +VL+E G DV Y
Sbjct: 655 RGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKR-KASEVLREFSAAGIGLDVVCYT 713
Query: 313 AAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFY 354
I C L +A +L D M GL P+ Y ++
Sbjct: 714 VLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYF 755
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 101/230 (43%), Gaps = 1/230 (0%)
Query: 222 AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIG 281
AE +M E+G DV +++D YCK L +A LD+M + L + + + I+
Sbjct: 302 AESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQ 361
Query: 282 GLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNP 341
+ +A + KE ++ + D YN A R+ EA++L+ EM +G+ P
Sbjct: 362 CYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVP 421
Query: 342 NATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLW 401
+ Y + + + ++ M+G G P+ + L+ + E L+++
Sbjct: 422 DVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIY 481
Query: 402 GDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
M +G + + V+ + LC K+ EAE F +E+ + SF
Sbjct: 482 ERMKAEGPKPNAVTNSVIIEGLCFARKVKEAED-FFSSLEQKCPENKASF 530
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 120/271 (44%), Gaps = 22/271 (8%)
Query: 153 VRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQT---F 209
V++ +FF ++ P+ + ++ C+ A + L++ R ++ F
Sbjct: 509 VKEAEDFFSSLEQKCPENKA----SFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFF 564
Query: 210 NILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDL 269
++ + G+ E A KKM V P ++ +CK + +A + D M ER L
Sbjct: 565 SLCIEGY--LEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGL 622
Query: 270 SPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNF----------C 319
PD+ TYT +I + + KA + ++MK+ G PDV Y + + C
Sbjct: 623 IPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETC 682
Query: 320 IAKR---LREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHP 376
+ R+A +++ E ++ G+ + Y + N+L+ + ++ RM+ G P
Sbjct: 683 SVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEP 742
Query: 377 NTQSCMFLIRLFKKQEKVEMALQLWGDMVEK 407
+ + LI + ++ ++MA+ L ++ +K
Sbjct: 743 DMVAYTTLISSYFRKGYIDMAVTLVTELSKK 773
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 89/180 (49%), Gaps = 21/180 (11%)
Query: 164 KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKT--PE 220
+ L+PD T + ++ T C+ + A +++ +K + +P++ T+ +LL + PE
Sbjct: 620 RGLIPDLFT--YTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPE 677
Query: 221 -------DAEVFFKKMREM-------GVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRE 266
EV +K E+ G+ DVV Y L+D CK LE+A ++ D M +
Sbjct: 678 HHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMID 737
Query: 267 RDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCI-AKRLR 325
L PD++ YT++I G D A ++ E+ + P ++ AA+++ + AKR +
Sbjct: 738 SGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPS-ESFEAAVKSAALKAKRFQ 796
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 105/230 (45%), Gaps = 9/230 (3%)
Query: 225 FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLG 284
FK+++++G+ + TY +V C+ LE+A +L E + V Y + I GL
Sbjct: 203 LFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIE------NESVFGYKTFINGLC 256
Query: 285 LVGQPDKARDVLKEM--KEYGCYPDVPAY-NAAIRNFCIAKRLREAYDLVDEMTSKGLNP 341
+ G+ +KA ++ E+ ++Y D+ A +R FC +++ A ++ EM G
Sbjct: 257 VTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGL 316
Query: 342 NATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLW 401
+ + + +L + +M+G G N +++ + K + AL+ +
Sbjct: 317 DVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKF 376
Query: 402 GDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+ + + +V FD L +G++ EA + EM ++G P +++
Sbjct: 377 KEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINY 426
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 156/336 (46%), Gaps = 5/336 (1%)
Query: 150 VCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQT 208
V ++ + F+R K+ + L+ + ++ A V +K + + NL+T
Sbjct: 462 VADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKT 521
Query: 209 FNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMR 265
++++++G+ K +A F+ M + G+ PDV+ YN+++ +C +++A + + EM+
Sbjct: 522 YSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQ 581
Query: 266 ERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLR 325
+ P T+ II G G ++ +V M+ GC P V +N I +++
Sbjct: 582 KLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQME 641
Query: 326 EAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLI 385
+A +++DEMT G++ N TY + + D ++ + R+ G + + L+
Sbjct: 642 KAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALL 701
Query: 386 RLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQK 445
+ K +++ AL + +M + + V ++L D G + EA +M ++G K
Sbjct: 702 KACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVK 761
Query: 446 PSNVSFRR-IKVLMELANRHEALQNLTQKMAVFGRP 480
P ++ I + + + A Q + + A+ +P
Sbjct: 762 PDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKP 797
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 140/321 (43%), Gaps = 29/321 (9%)
Query: 136 TPRTVMVVLARTAKVCSVRQTVEFFRRFKKL--VPDFDTNCFNALLRTLCQEKSMTDARN 193
T RT M ++ AK +R+++E F ++ VP T FN L+ L +++ M A
Sbjct: 588 TTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHT--FNGLINGLVEKRQMEKAVE 645
Query: 194 VYHSLK-HQFRPNLQTFNILLSGWKTPED---AEVFFKKMREMGVTPDVVTYNSLVDVYC 249
+ + N T+ ++ G+ + D A +F +++ G+ D+ TY +L+ C
Sbjct: 646 ILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACC 705
Query: 250 KGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVP 309
K ++ A V EM R++ + Y +I G G +A D++++MK+ G PD+
Sbjct: 706 KSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIH 765
Query: 310 AYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRM 369
Y + I A + A ++EM + G+ PN TY + + ++ + + + Y M
Sbjct: 766 TYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEM 825
Query: 370 MGLGCHPNTQ--SCMFLIRLFKKQEKVEM-----ALQLWGDMVEKGFGSYTLVSDVLFDL 422
+G P+ C+ L L + E + + +MVE G L
Sbjct: 826 KAMGIKPDKAVYHCL-LTSLLSRASIAEAYIYSGVMTICKEMVEAG-------------L 871
Query: 423 LCDMGKLGEAEKCFLEMIEKG 443
+ DMG KC ++ G
Sbjct: 872 IVDMGTAVHWSKCLCKIEASG 892
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 119/282 (42%), Gaps = 4/282 (1%)
Query: 203 RPNLQTFNILLSGWKTPED---AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYK 259
+P+ F +++ + D A F++MR G+TP Y SL+ Y GR++++A
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365
Query: 260 VLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFC 319
+ +M+E + ++TY+ I+GG G + A E K + Y I C
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC 425
Query: 320 IAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQ 379
+ A LV EM +G++ Y+ + D + ++ R+ G P
Sbjct: 426 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVV 485
Query: 380 SCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEM 439
+ LI L+ K K+ AL++ M E+G ++ + + A F +M
Sbjct: 486 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM 545
Query: 440 IEKGQKPSNVSFRR-IKVLMELANRHEALQNLTQKMAVFGRP 480
+++G KP + + I + N A+Q + + + RP
Sbjct: 546 VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRP 587
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 105/235 (44%)
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
E AE ++M E G+ + Y++++D Y + +K V ++E +P V+TY +
Sbjct: 431 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL 490
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
I VG+ KA +V + MKE G ++ Y+ I F K A+ + ++M +G+
Sbjct: 491 INLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGM 550
Query: 340 NPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQ 399
P+ YN F ++ + M L P T++ M +I + K + +L+
Sbjct: 551 KPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLE 610
Query: 400 LWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
++ M G + L + L + ++ +A + EM G + ++ +I
Sbjct: 611 VFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKI 665
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 135/295 (45%), Gaps = 6/295 (2%)
Query: 176 NALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGW-KTPEDAEVF--FKKMREM 232
N +L+ L ++ +R + L PN+ TF L++G+ K E F FK M +
Sbjct: 256 NKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR 315
Query: 233 GVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKA 292
G+ PD++ Y++L+D Y K L +K+ + + + DV+ ++S I G A
Sbjct: 316 GIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATA 375
Query: 293 RDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRI 352
V K M G P+V Y I+ C R+ EA+ + ++ +G+ P+ TY+
Sbjct: 376 SVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDG 435
Query: 353 FYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSY 412
F +L+S + +Y M+ +G P+ L+ KQ + A++ M+ +
Sbjct: 436 FCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLN 495
Query: 413 TLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFR---RIKVLMELANRH 464
+V + L D C + + EA K F M G KP +F R+ ++ + +H
Sbjct: 496 VVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKH 550
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 103/207 (49%), Gaps = 8/207 (3%)
Query: 142 VVLARTAKVCSVRQTVEFFRRF--KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLK 199
VV+ K + +FF K+ PD T +N ++ C + + +A ++ LK
Sbjct: 577 VVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVT--YNTMICGYCSLRRLDEAERIFELLK 634
Query: 200 -HQFRPNLQTFNILLSGWKTPED---AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELE 255
F PN T IL+ D A F M E G P+ VTY L+D + K ++E
Sbjct: 635 VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIE 694
Query: 256 KAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAI 315
++K+ +EM+E+ +SP +++Y+ II GL G+ D+A ++ + + PDV AY I
Sbjct: 695 GSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 754
Query: 316 RNFCIAKRLREAYDLVDEMTSKGLNPN 342
R +C RL EA L + M G+ P+
Sbjct: 755 RGYCKVGRLVEAALLYEHMLRNGVKPD 781
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 129/283 (45%), Gaps = 2/283 (0%)
Query: 198 LKHQFRPNLQTFNILLSGWKTP--EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELE 255
++ FR + + N +L G E A + + G P+VVT+ +L++ +CK E++
Sbjct: 244 MERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMD 303
Query: 256 KAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAI 315
+A+ + M +R + PD+I Y+++I G G + + G DV +++ I
Sbjct: 304 RAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTI 363
Query: 316 RNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCH 375
+ + L A + M +G++PN TY + + + ++ MY +++ G
Sbjct: 364 DVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME 423
Query: 376 PNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKC 435
P+ + LI F K + L+ DM++ G+ ++ VL D L G + A +
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483
Query: 436 FLEMIEKGQKPSNVSFRRIKVLMELANRHEALQNLTQKMAVFG 478
++M+ + + + V F + NR + + + M ++G
Sbjct: 484 SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYG 526
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 120/285 (42%), Gaps = 10/285 (3%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLK-HQFRPNLQTFNILL---------SGWKTPEDAEV 224
FN+L+ C+ +A V+ + + +P++ TF ++ P
Sbjct: 499 FNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQ 558
Query: 225 FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLG 284
F M+ ++ D+ N ++ + K +E A K + + E + PD++TY ++I G
Sbjct: 559 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYC 618
Query: 285 LVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNAT 344
+ + D+A + + +K P+ I C + A + M KG PNA
Sbjct: 619 SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 678
Query: 345 TYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDM 404
TY F S D++ S+ ++ M G P+ S +I K+ +V+ A ++
Sbjct: 679 TYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 738
Query: 405 VEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNV 449
++ + +L C +G+L EA + M+ G KP ++
Sbjct: 739 IDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 783
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 136/326 (41%), Gaps = 19/326 (5%)
Query: 194 VYHSLKHQFRPNLQTFNILLSGWKTPEDAEVF--------------FKKMREM---GVTP 236
V S + P F I S WK D+ F F + + G P
Sbjct: 45 VLASTQITLSPKDSAFTITGSSWKPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKP 104
Query: 237 DVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVL 296
+V L+ CK L+KA +V++ M + PD YT ++ L G A ++
Sbjct: 105 NVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLV 164
Query: 297 KEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWS 356
++M+++G + YNA +R C+ L ++ V+ + KGL PNA TY+ Y
Sbjct: 165 EKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKE 224
Query: 357 NDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVS 416
+ + ++ G PN S L+ F K+ + + A+ L+ ++ KGF + +
Sbjct: 225 RGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSY 284
Query: 417 DVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEALQNLTQKMAV 476
++L LC G+ EA EM + PS V++ + + R E + ++M+
Sbjct: 285 NILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSK 344
Query: 477 FGRPVQVRES--RPVQVHESRESAID 500
+V + PV +E +D
Sbjct: 345 GNHQFRVTATSYNPVIARLCKEGKVD 370
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 119/256 (46%), Gaps = 8/256 (3%)
Query: 225 FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLG 284
+KM + G + VTYN+LV C L ++ + ++ + ++ L+P+ TY+ ++
Sbjct: 163 LVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAY 222
Query: 285 LVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNAT 344
D+A +L E+ G P++ +YN + FC R +A L E+ +KG N
Sbjct: 223 KERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVV 282
Query: 345 TYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDM 404
+YN+ R + + ++ M G P+ + LI + E ALQ+ +M
Sbjct: 283 SYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEM 342
Query: 405 VEKGFGSYTLVS---DVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELA 461
KG + + + + + LC GK+ KC EMI + KP+ ++ I L E
Sbjct: 343 -SKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHN 401
Query: 462 NR-HEA---LQNLTQK 473
++ EA +Q+L+ K
Sbjct: 402 SKVQEAFYIIQSLSNK 417
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 114/275 (41%), Gaps = 12/275 (4%)
Query: 95 KGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQ--TLITPRTVMVVLARTAKVCS 152
KGF S + +L L + LL E D+ +++T ++ LA +
Sbjct: 275 KGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRT-- 332
Query: 153 VRQTVEFFRRFKKLVPDF--DTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTF 209
Q ++ + K F +N ++ LC+E + + ++ +PN T+
Sbjct: 333 -EQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTY 391
Query: 210 NILLSGWKTPEDAEVFFKKMREMGVTPDVVT---YNSLVDVYCKGRELEKAYKVLDEMRE 266
N + S + + F ++ + T Y S++ C+ A+++L EM
Sbjct: 392 NAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTR 451
Query: 267 RDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEY-GCYPDVPAYNAAIRNFCIAKRLR 325
PD TY+++I GL L G A +VL M+E C P V +NA I C +R
Sbjct: 452 CGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTD 511
Query: 326 EAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQ 360
A ++ + M K PN TTY + ++L+
Sbjct: 512 LAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELE 546
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 105/278 (37%), Gaps = 48/278 (17%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILL------SGWKTPEDAEVFFK 227
+N LL C+E DA ++ L + F+ N+ ++NILL W E+A
Sbjct: 249 YNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRW---EEANSLLA 305
Query: 228 KMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERD--LSPDVITYTSIIGGLGL 285
+M P VVTYN L++ E+A +VL EM + + +Y +I L
Sbjct: 306 EMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCK 365
Query: 286 VGQPDKARDVLKEMKEYGCYPDVPAYNA-------------------------------- 313
G+ D L EM C P+ YNA
Sbjct: 366 EGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDF 425
Query: 314 ---AIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRM- 369
I + C A+ L+ EMT G +P+A TY+ R + + M
Sbjct: 426 YKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIME 485
Query: 370 MGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEK 407
C P + +I K + ++A++++ MVEK
Sbjct: 486 ESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEK 523
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/414 (21%), Positives = 176/414 (42%), Gaps = 17/414 (4%)
Query: 11 QSTFLPAPNLILSRLLSSTLNDGDVHRVMTIITTTSSPENLRQSLKSSGVFLSNELIDQV 70
+S ++P + + L+ + G + R ++ +N S K+ GV + N I+ +
Sbjct: 183 ESRYVPTED-TYALLIKAYCMAGLIERAEVVLVEM---QNHHVSPKTIGVTVYNAYIEGL 238
Query: 71 LKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWK 130
+KR N + ++ ++ +R T + + M+ + G++ W L E R
Sbjct: 239 MKR----KGNTEEAIDVFQRM-KRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSH 293
Query: 131 D-QTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMT 189
+ I T +V +C + E F + ++ + D +NAL+ + +
Sbjct: 294 QCKPNICTYTALVNAFAREGLC--EKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPY 351
Query: 190 DARNVYHSLKHQ-FRPNLQTFNILLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLV 245
A ++ ++H P+ ++NI++ + DAE F++M+ +G+ P + ++ L+
Sbjct: 352 GAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLL 411
Query: 246 DVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCY 305
Y K R++ K ++ EM E + PD S++ G +GQ K +L EM+ C
Sbjct: 412 SAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCT 471
Query: 306 PDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNM 365
D+ YN I + A L +L E+ K P+ T+ + +
Sbjct: 472 ADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEV 531
Query: 366 YHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVL 419
+ M+ GC P+ + L+ +E+VE + M KG +LV ++
Sbjct: 532 FEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM-HKGVTVSSLVPKLM 584
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 104/254 (40%), Gaps = 4/254 (1%)
Query: 229 MREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQ 288
+R+ PDV+ +N L+D Y + + ++A + ++ E P TY +I + G
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 205
Query: 289 PDKARDVLKEMKEYGCYP---DVPAYNAAIRNFCIAK-RLREAYDLVDEMTSKGLNPNAT 344
++A VL EM+ + P V YNA I K EA D+ M P
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 265
Query: 345 TYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDM 404
TYNL ++ ++ SW +Y M C PN + L+ F ++ E A +++ +
Sbjct: 266 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 325
Query: 405 VEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRH 464
E G V + L + G A + F M G +P S+ + A H
Sbjct: 326 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 385
Query: 465 EALQNLTQKMAVFG 478
+ + ++M G
Sbjct: 386 SDAEAVFEEMKRLG 399
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 106/256 (41%), Gaps = 7/256 (2%)
Query: 199 KHQFRPNLQTFNILLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELE 255
K F+P++ FN+L+ + ++AE + ++ E P TY L+ YC +E
Sbjct: 148 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIE 207
Query: 256 KAYKVLDEMRERDLSPDVI---TYTSIIGGL-GLVGQPDKARDVLKEMKEYGCYPDVPAY 311
+A VL EM+ +SP I Y + I GL G ++A DV + MK C P Y
Sbjct: 208 RAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETY 267
Query: 312 NAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMG 371
N I + A + ++ L EM S PN TY F + + ++ ++
Sbjct: 268 NLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE 327
Query: 372 LGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGE 431
G P+ L+ + + A +++ M G +++ D G +
Sbjct: 328 DGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSD 387
Query: 432 AEKCFLEMIEKGQKPS 447
AE F EM G P+
Sbjct: 388 AEAVFEEMKRLGIAPT 403
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/414 (21%), Positives = 176/414 (42%), Gaps = 17/414 (4%)
Query: 11 QSTFLPAPNLILSRLLSSTLNDGDVHRVMTIITTTSSPENLRQSLKSSGVFLSNELIDQV 70
+S ++P + + L+ + G + R ++ +N S K+ GV + N I+ +
Sbjct: 205 ESRYVPTED-TYALLIKAYCMAGLIERAEVVLVEM---QNHHVSPKTIGVTVYNAYIEGL 260
Query: 71 LKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWK 130
+KR N + ++ ++ +R T + + M+ + G++ W L E R
Sbjct: 261 MKR----KGNTEEAIDVFQRM-KRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSH 315
Query: 131 D-QTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMT 189
+ I T +V +C + E F + ++ + D +NAL+ + +
Sbjct: 316 QCKPNICTYTALVNAFAREGLC--EKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPY 373
Query: 190 DARNVYHSLKHQ-FRPNLQTFNILLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLV 245
A ++ ++H P+ ++NI++ + DAE F++M+ +G+ P + ++ L+
Sbjct: 374 GAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLL 433
Query: 246 DVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCY 305
Y K R++ K ++ EM E + PD S++ G +GQ K +L EM+ C
Sbjct: 434 SAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCT 493
Query: 306 PDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNM 365
D+ YN I + A L +L E+ K P+ T+ + +
Sbjct: 494 ADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEV 553
Query: 366 YHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVL 419
+ M+ GC P+ + L+ +E+VE + M KG +LV ++
Sbjct: 554 FEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM-HKGVTVSSLVPKLM 606
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 104/254 (40%), Gaps = 4/254 (1%)
Query: 229 MREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQ 288
+R+ PDV+ +N L+D Y + + ++A + ++ E P TY +I + G
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 227
Query: 289 PDKARDVLKEMKEYGCYP---DVPAYNAAIRNFCIAK-RLREAYDLVDEMTSKGLNPNAT 344
++A VL EM+ + P V YNA I K EA D+ M P
Sbjct: 228 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 287
Query: 345 TYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDM 404
TYNL ++ ++ SW +Y M C PN + L+ F ++ E A +++ +
Sbjct: 288 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 347
Query: 405 VEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRH 464
E G V + L + G A + F M G +P S+ + A H
Sbjct: 348 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 407
Query: 465 EALQNLTQKMAVFG 478
+ + ++M G
Sbjct: 408 SDAEAVFEEMKRLG 421
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 106/256 (41%), Gaps = 7/256 (2%)
Query: 199 KHQFRPNLQTFNILLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELE 255
K F+P++ FN+L+ + ++AE + ++ E P TY L+ YC +E
Sbjct: 170 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIE 229
Query: 256 KAYKVLDEMRERDLSPDVI---TYTSIIGGL-GLVGQPDKARDVLKEMKEYGCYPDVPAY 311
+A VL EM+ +SP I Y + I GL G ++A DV + MK C P Y
Sbjct: 230 RAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETY 289
Query: 312 NAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMG 371
N I + A + ++ L EM S PN TY F + + ++ ++
Sbjct: 290 NLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE 349
Query: 372 LGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGE 431
G P+ L+ + + A +++ M G +++ D G +
Sbjct: 350 DGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSD 409
Query: 432 AEKCFLEMIEKGQKPS 447
AE F EM G P+
Sbjct: 410 AEAVFEEMKRLGIAPT 425
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 123/234 (52%), Gaps = 10/234 (4%)
Query: 206 LQTFNILLSGW---KTPEDAEVFFKKMRE-MGVTPDVVTYNSLVDVYCKGRELEKAYKVL 261
+++FN LLS + K ++A FK++ E +G+TPD+VTYN+++ C+ ++ +
Sbjct: 157 VKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIF 216
Query: 262 DEMRERDLSPDVITYTSIIGGL---GLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNF 318
+E+ + PD+I++ +++ L + D+ D+ MK P++ +YN+ +R
Sbjct: 217 EELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDL---MKSKNLSPNIRSYNSRVRGL 273
Query: 319 CIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNT 378
K+ +A +L+D M ++G++P+ TYN + N+L+ Y+ M G P+T
Sbjct: 274 TRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDT 333
Query: 379 QSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEA 432
+ LI L K+ ++ A+++ + ++ S + + + L GK+ EA
Sbjct: 334 VTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEA 387
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 140/308 (45%), Gaps = 16/308 (5%)
Query: 145 ARTAKVCSVRQTVEFFRR------FKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL 198
A+ +K + Q VE F+R F+++ ++A +R L + K + V
Sbjct: 59 AKDSKNSKLTQKVEKFKRSCESESFRQV-----HGLYSAFIRRLREAKKFSTIDEVLQYQ 113
Query: 199 KHQFRPNLQTFNI---LLSGWKT-PEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGREL 254
K + F I LL G+ E A F +M E+ V ++N+L+ Y ++L
Sbjct: 114 KKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKL 173
Query: 255 EKAYKVLDEMRER-DLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNA 313
++A K E+ E+ ++PD++TY ++I L G D + +E+++ G PD+ ++N
Sbjct: 174 DEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNT 233
Query: 314 AIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLG 373
+ F + E + D M SK L+PN +YN R + + N+ M G
Sbjct: 234 LLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEG 293
Query: 374 CHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAE 433
P+ + LI ++ +E ++ + +M EKG T+ +L LLC G L A
Sbjct: 294 ISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAV 353
Query: 434 KCFLEMIE 441
+ E I+
Sbjct: 354 EVSEEAIK 361
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 112/270 (41%), Gaps = 51/270 (18%)
Query: 107 MLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKL 166
++ + G S M H L E L RTV A + + ++ E + FK+L
Sbjct: 128 IMLLYGYSGMAEHAHKLFDEM----PELNCERTVKSFNALLSAYVNSKKLDEAMKTFKEL 183
Query: 167 ------VPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTP 219
PD T +N +++ LC++ SM D +++ L K+ F P+L +FN LL +
Sbjct: 184 PEKLGITPDLVT--YNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRR 241
Query: 220 E--------------------------------------DAEVFFKKMREMGVTPDVVTY 241
E DA M+ G++PDV TY
Sbjct: 242 ELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTY 301
Query: 242 NSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKE 301
N+L+ Y LE+ K +EM+E+ L+PD +TY +I L G D+A +V +E +
Sbjct: 302 NALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIK 361
Query: 302 YGCYPDVPAYNAAIRNFCIAKRLREAYDLV 331
+ Y + A ++ EA LV
Sbjct: 362 HKLLSRPNMYKPVVERLMGAGKIDEATQLV 391
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 84/156 (53%), Gaps = 9/156 (5%)
Query: 162 RFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKTPE 220
+ K L P+ +N+ +R L + K TDA N+ +K + P++ T+N L++ ++
Sbjct: 255 KSKNLSPNI--RSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDN 312
Query: 221 DAEVFFK---KMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYT 277
+ E K +M+E G+TPD VTY L+ + CK +L++A +V +E + L Y
Sbjct: 313 NLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYK 372
Query: 278 SIIGGLGLVGQPDKARDVLK--EMKEYGCY-PDVPA 310
++ L G+ D+A ++K +++ Y Y PD+ A
Sbjct: 373 PVVERLMGAGKIDEATQLVKNGKLQSYFRYLPDLSA 408
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 127/308 (41%), Gaps = 39/308 (12%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGW---KTPEDAEVFFKKMR 230
+NAL+ C++ + A + + K +PN++TFN L+ G P A K+M
Sbjct: 374 YNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRML 433
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
+ G++PD+V+YN L+D C+ + AYK+L M D+ PD +T+T+II G+ D
Sbjct: 434 DNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKAD 493
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREA------------------YDLVD 332
A L M G D I C + R+A +++
Sbjct: 494 VASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVIL 553
Query: 333 EMTSK-----------------GLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCH 375
+M SK GL P+ TY S D+ S+ + M GC
Sbjct: 554 DMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCL 613
Query: 376 PNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKC 435
PN +I + +VE A +L M + G + V+ + GKL A +
Sbjct: 614 PNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALET 673
Query: 436 FLEMIEKG 443
M+E+G
Sbjct: 674 VRAMVERG 681
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 122/262 (46%), Gaps = 4/262 (1%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGW---KTPEDAEVFFKKMR 230
++ L+ LC+ + +A + + + +P+ +T+ +L+ + A F +M
Sbjct: 269 YSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMI 328
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
G P+V TY L+D C+ ++E+A V +M + + P VITY ++I G G+
Sbjct: 329 PRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVV 388
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
A ++L M++ C P+V +N + C + +A L+ M GL+P+ +YN+
Sbjct: 389 PAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLI 448
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG 410
+ +++ + M P+ + +I F KQ K ++A G M+ KG
Sbjct: 449 DGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGIS 508
Query: 411 SYTLVSDVLFDLLCDMGKLGEA 432
+ L D +C +GK +A
Sbjct: 509 LDEVTGTTLIDGVCKVGKTRDA 530
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 124/286 (43%), Gaps = 7/286 (2%)
Query: 175 FNALLRTLCQEKSMTDARNVYHS--LKHQFRPNLQTFNILLSGW----KTPEDAEVFFKK 228
+ ++ LC+ T+A ++ S LK F + LL G+ + +VF
Sbjct: 198 YRTIVNALCK-NGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVM 256
Query: 229 MREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQ 288
+E+ P+ V+Y+ L+ C+ LE+A+ + D+M E+ P TYT +I L G
Sbjct: 257 SKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGL 316
Query: 289 PDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNL 348
DKA ++ EM GC P+V Y I C ++ EA + +M + P+ TYN
Sbjct: 317 IDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNA 376
Query: 349 FFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKG 408
+ + ++ + M C PN ++ L+ + K A+ L M++ G
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436
Query: 409 FGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
+ +VL D LC G + A K M +P ++F I
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAI 482
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 128/320 (40%), Gaps = 61/320 (19%)
Query: 113 RSRMFNHI--WDLLIEARWKDQTLITPRTVMVVLARTAKVCSVR---------------- 154
+ R+F + ++ LI KD ++ ++ V+ + A +VR
Sbjct: 364 KDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPY 423
Query: 155 QTVEFFRRF--KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLK-HQFRPNLQTFNI 211
+ V +R L PD + +N L+ LC+E M A + S+ P+ TF
Sbjct: 424 KAVHLLKRMLDNGLSPDIVS--YNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTA 481
Query: 212 LLSGWKTPEDAEV---FFKKMREMGVTPDVVTYNSLVDVYCK------------------ 250
+++ + A+V F M G++ D VT +L+D CK
Sbjct: 482 IINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMR 541
Query: 251 -----------------GRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKAR 293
G ++++ +L ++ + L P V+TYT+++ GL G +
Sbjct: 542 ILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSF 601
Query: 294 DVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIF 353
+L+ MK GC P+V Y I C R+ EA L+ M G++PN TY + + +
Sbjct: 602 RILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGY 661
Query: 354 YWSNDLQSSWNMYHRMMGLG 373
+ L + M+ G
Sbjct: 662 VNNGKLDRALETVRAMVERG 681
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 11/239 (4%)
Query: 222 AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIG 281
A V +++M G ++ Y ++V+ CK E A + ++ + D TS++
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLL 238
Query: 282 GL--GLVGQPDKARDVLKEM----KEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMT 335
G GL RD LK KE C P+ +Y+ I C RL EA+ L D+M
Sbjct: 239 GFCRGL-----NLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG 293
Query: 336 SKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVE 395
KG P+ TY + + + ++N++ M+ GC PN + LI + K+E
Sbjct: 294 EKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIE 353
Query: 396 MALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
A + MV+ + + L + C G++ A + M ++ KP+ +F +
Sbjct: 354 EANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNEL 412
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 83/168 (49%), Gaps = 8/168 (4%)
Query: 124 LIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKK--LVPDFDTNCFNALLRT 181
++E K + L TP ++ V+L +K C V++ + + K LVP T + L+
Sbjct: 533 ILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVT--YTTLVDG 590
Query: 182 LCQEKSMTDARNVYHSLK-HQFRPNLQTFNILLSG---WKTPEDAEVFFKKMREMGVTPD 237
L + +T + + +K PN+ + I+++G + E+AE M++ GV+P+
Sbjct: 591 LIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPN 650
Query: 238 VVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGL 285
VTY +V Y +L++A + + M ER + Y+S++ G L
Sbjct: 651 HVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVL 698
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 108/241 (44%), Gaps = 5/241 (2%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSLKHQF--RPNLQTFNILLSG---WKTPEDAEVF 225
DT +N LL+ LC+ K + ++ F +P+L +F IL+ K +A
Sbjct: 193 DTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYL 252
Query: 226 FKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGL 285
K+ G PD YN+++ +C + +A V +M+E + PD ITY ++I GL
Sbjct: 253 VSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSK 312
Query: 286 VGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATT 345
G+ ++AR LK M + G PD Y + + C A L++EM ++G PN T
Sbjct: 313 AGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCT 372
Query: 346 YNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMV 405
YN + + +Y M G + L+R K KV A +++ V
Sbjct: 373 YNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAV 432
Query: 406 E 406
+
Sbjct: 433 D 433
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 114/263 (43%), Gaps = 5/263 (1%)
Query: 179 LRTLCQEKSMTDARNVYHSLKHQFRP-NLQTFNILLSGWKTPEDAEVFFKKMREM----G 233
+R+LC+ + +A+++ L + P + T+N LL +D V ++ + EM
Sbjct: 166 VRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFD 225
Query: 234 VTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKAR 293
V PD+V++ L+D C + L +A ++ ++ PD Y +I+ G + + +A
Sbjct: 226 VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAV 285
Query: 294 DVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIF 353
V K+MKE G PD YN I A R+ EA + M G P+ TY
Sbjct: 286 GVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGM 345
Query: 354 YWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYT 413
+ + ++ M GC PN + L+ K ++ ++L+ M G +
Sbjct: 346 CRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLES 405
Query: 414 LVSDVLFDLLCDMGKLGEAEKCF 436
L L GK+ EA + F
Sbjct: 406 NGYATLVRSLVKSGKVAEAYEVF 428
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 128/294 (43%), Gaps = 9/294 (3%)
Query: 170 FDTNCFNALLRTLCQEKSMTDARNVY-HSLKHQ--FRPNLQTFNILLSGWKTPEDAEV-- 224
D N++L++ + D ++ H LK Q FRP TF ILLS D+ +
Sbjct: 83 LDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISN 142
Query: 225 ---FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIG 281
M G+ PD VT + V C+ +++A ++ E+ E+ PD TY ++
Sbjct: 143 VHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLK 202
Query: 282 GLGLVGQPDKARDVLKEMKE-YGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLN 340
L + + EM++ + PD+ ++ I N C +K LREA LV ++ + G
Sbjct: 203 HLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFK 262
Query: 341 PNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQL 400
P+ YN + F + + +Y +M G P+ + LI K +VE A
Sbjct: 263 PDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMY 322
Query: 401 WGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
MV+ G+ T L + +C G+ A EM +G P++ ++ +
Sbjct: 323 LKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTL 376
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 9/214 (4%)
Query: 150 VCSVRQTVEFFRRFKKLV-PDFDTNCF--NALLRTLCQEKSMTDARNVYHSLKHQ-FRPN 205
VC+ + E KL F +CF N +++ C ++A VY +K + P+
Sbjct: 240 VCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD 299
Query: 206 LQTFNILLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLD 262
T+N L+ G E+A ++ K M + G PD TY SL++ C+ E A +L+
Sbjct: 300 QITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLE 359
Query: 263 EMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAK 322
EM R +P+ TY +++ GL DK ++ + MK G + Y +R+ +
Sbjct: 360 EMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSG 419
Query: 323 RLREAYDLVD-EMTSKGLNPNATTYNLFFRIFYW 355
++ EAY++ D + SK L+ +A+ Y+ W
Sbjct: 420 KVAEAYEVFDYAVDSKSLS-DASAYSTLETTLKW 452
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 74/185 (40%), Gaps = 1/185 (0%)
Query: 295 VLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFY 354
VL M G PD + A+R+ C R+ EA DL+ E+T K P+ TYN +
Sbjct: 146 VLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLC 205
Query: 355 WSNDLQSSWNMYHRMMG-LGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYT 413
DL + M P+ S LI + + A+ L + GF
Sbjct: 206 KCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDC 265
Query: 414 LVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEALQNLTQK 473
+ + + C + K EA + +M E+G +P +++ + + A R E + +
Sbjct: 266 FLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKT 325
Query: 474 MAVFG 478
M G
Sbjct: 326 MVDAG 330
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 106/239 (44%), Gaps = 1/239 (0%)
Query: 241 YNSLVDVYCKGRELEKAYKVLDEM-RERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEM 299
+ S +D YC+ R+++ A D M R D P+V Y +++ G G DKA + M
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 300 KEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDL 359
+ PDV +N I +C + + A DL EM KG PN ++N R F S +
Sbjct: 220 GKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKI 279
Query: 360 QSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVL 419
+ M + M+ LGC + +C L+ ++ +V+ A L D++ K L
Sbjct: 280 EEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSL 339
Query: 420 FDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEALQNLTQKMAVFG 478
+ LC K A + E+ +KGQ P ++ + + + R E +KM G
Sbjct: 340 VEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAG 398
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 123/282 (43%), Gaps = 5/282 (1%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKHQF--RPNLQTFNILLSGWKTPED---AEVFFKKM 229
F + + C+ + M A + ++K +PN+ +N +++G+ D A F+++M
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 230 REMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQP 289
+ PDV T+N L++ YC+ + + A + EM+E+ P+V+++ ++I G G+
Sbjct: 220 GKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKI 279
Query: 290 DKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLF 349
++ + EM E GC + C R+ +A LV ++ +K + P+ Y
Sbjct: 280 EEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSL 339
Query: 350 FRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGF 409
N + M + G P +C L+ +K + E A M+ G
Sbjct: 340 VEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGI 399
Query: 410 GSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
++ ++L LC +A + L KG +P ++
Sbjct: 400 LPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTY 441
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 101/238 (42%), Gaps = 39/238 (16%)
Query: 155 QTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILL 213
+ + F++R K D FN L+ C+ A +++ +K + PN+ +FN L+
Sbjct: 211 KALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLI 270
Query: 214 SGWKTPEDAEVFFK---KMREMG-----------------------------------VT 235
G+ + E K +M E+G V
Sbjct: 271 RGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVL 330
Query: 236 PDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDV 295
P Y SLV+ C + +A ++++E+ ++ +P I T+++ GL G+ +KA
Sbjct: 331 PSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGF 390
Query: 296 LKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIF 353
+++M G PD +N +R+ C + +A L +SKG P+ TTY++ F
Sbjct: 391 MEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGF 448
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 8/154 (5%)
Query: 164 KKLVP-DFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTP-- 219
K+++P +FD + +L+ LC E A + L K P L+ G +
Sbjct: 327 KRVLPSEFD---YGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGR 383
Query: 220 -EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTS 278
E A F +KM G+ PD VT+N L+ C A ++ + PD TY
Sbjct: 384 TEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHV 443
Query: 279 IIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYN 312
++ G G+ + ++ EM + PD+ YN
Sbjct: 444 LVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYN 477
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 162/365 (44%), Gaps = 14/365 (3%)
Query: 28 STLNDGDVHRVMTII-TTTSSPEN-LRQSLKSSGVFLSNELIDQVLKRVRFSHANPSQTL 85
+ +N + RV TI+ +SP++ L L S+ L++E QV S P
Sbjct: 39 TPINQDHLLRVCTILYQQQNSPDSRLVSKLSSTKFQLTHEFFLQVCNNFPLS-WRPVHRF 97
Query: 86 EFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVLA 145
Y T F HT+ + + ML I+G SR + W+L E + L+ +T +VL
Sbjct: 98 FLYSQT-HHPDFTHTSTTSNKMLAIIGNSRNMDLFWELAQEI--GKRGLVNDKTFRIVLK 154
Query: 146 RTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPN 205
A +++ V +F ++ N + TLC+EK + +A+ V+ LK +P+
Sbjct: 155 TLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKEFIKPD 214
Query: 206 LQTFNILLSGWKTPED---AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLD 262
T+ ++ G+ D A + M + G D+ +++ K + ++A KV
Sbjct: 215 EITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFY 274
Query: 263 EM-RERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIA 321
M +R D Y +I L G+ D AR V EM+E G Y D + + I +
Sbjct: 275 VMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVK 334
Query: 322 KRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSC 381
+R+ EAY LV+ + NP+ + Y+ + + ++ +M+ GC P +
Sbjct: 335 RRVVEAYGLVEGVE----NPDISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTY 390
Query: 382 MFLIR 386
+ L++
Sbjct: 391 LMLLQ 395
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 114/277 (41%), Gaps = 12/277 (4%)
Query: 182 LCQEKSMTDARNVYH------SLKHQFRPNLQTFNILLSGWKTPEDAEVFFKKMREMGVT 235
L Q+++ D+R V L H+F LQ N W+ P + + T
Sbjct: 53 LYQQQNSPDSRLVSKLSSTKFQLTHEF--FLQVCNNFPLSWR-PVHRFFLYSQTHHPDFT 109
Query: 236 PDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDV 295
T N ++ + R ++ +++ E+ +R L D T+ ++ L + K +
Sbjct: 110 HTSTTSNKMLAIIGNSRNMDLFWELAQEIGKRGLVNDK-TFRIVLKTLASARELKKCVNY 168
Query: 296 LKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYW 355
M +G +V N + C K + EA V + + P+ TY + F
Sbjct: 169 FHLMNGFGYLYNVETMNRGVETLCKEKLVEEA-KFVFIKLKEFIKPDEITYRTMIQGFCD 227
Query: 356 SNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSY-TL 414
DL + +++ MM G + ++ ++ K+ + + A +++ MV K G
Sbjct: 228 VGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGG 287
Query: 415 VSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
V+ D LC G++ A K F EM E+G N+++
Sbjct: 288 FYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTW 324
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 133/278 (47%), Gaps = 4/278 (1%)
Query: 136 TPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVY 195
P T+ +V++ + + + +E + ++L +N L+ C++ ++ A +
Sbjct: 237 NPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLK 296
Query: 196 HSL-KHQFRPNLQTFNILLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKG 251
+ + K +PN+ TFN L+ G+ ++A F +M+ + V P+ VTYN+L++ Y +
Sbjct: 297 NMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQ 356
Query: 252 RELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAY 311
+ E A++ ++M + D++TY ++I GL + KA +KE+ + P+ +
Sbjct: 357 GDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTF 416
Query: 312 NAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMG 371
+A I C+ K ++L M G +PN T+N+ F + D + + M+
Sbjct: 417 SALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVR 476
Query: 372 LGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGF 409
++++ + K Q K ++ +L +M K F
Sbjct: 477 RSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKF 514
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 122/281 (43%), Gaps = 6/281 (2%)
Query: 177 ALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKTPEDAEVF------FKKMR 230
++LR + + V+ +L + +R T + S +KT + F F +M+
Sbjct: 136 SILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMK 195
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
+ G P V + N+ + ++ A + EMR +SP+ T ++ G G+ D
Sbjct: 196 DYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLD 255
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
K ++L++M+ G +YN I C L A L + M GL PN T+N
Sbjct: 256 KGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLI 315
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG 410
F + LQ + ++ M + PNT + LI + +Q EMA + + DMV G
Sbjct: 316 HGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQ 375
Query: 411 SYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
L + L LC K +A + E+ ++ P++ +F
Sbjct: 376 RDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTF 416
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 133/278 (47%), Gaps = 4/278 (1%)
Query: 136 TPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVY 195
P T+ +V++ + + + +E + ++L +N L+ C++ ++ A +
Sbjct: 237 NPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLK 296
Query: 196 HSL-KHQFRPNLQTFNILLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKG 251
+ + K +PN+ TFN L+ G+ ++A F +M+ + V P+ VTYN+L++ Y +
Sbjct: 297 NMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQ 356
Query: 252 RELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAY 311
+ E A++ ++M + D++TY ++I GL + KA +KE+ + P+ +
Sbjct: 357 GDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTF 416
Query: 312 NAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMG 371
+A I C+ K ++L M G +PN T+N+ F + D + + M+
Sbjct: 417 SALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVR 476
Query: 372 LGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGF 409
++++ + K Q K ++ +L +M K F
Sbjct: 477 RSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKF 514
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 122/281 (43%), Gaps = 6/281 (2%)
Query: 177 ALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKTPEDAEVF------FKKMR 230
++LR + + V+ +L + +R T + S +KT + F F +M+
Sbjct: 136 SILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMK 195
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
+ G P V + N+ + ++ A + EMR +SP+ T ++ G G+ D
Sbjct: 196 DYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLD 255
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
K ++L++M+ G +YN I C L A L + M GL PN T+N
Sbjct: 256 KGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLI 315
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG 410
F + LQ + ++ M + PNT + LI + +Q EMA + + DMV G
Sbjct: 316 HGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQ 375
Query: 411 SYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
L + L LC K +A + E+ ++ P++ +F
Sbjct: 376 RDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTF 416
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 93/194 (47%), Gaps = 4/194 (2%)
Query: 205 NLQTFNILLSGWKTPEDAEV---FFKKMREMGVTP-DVVTYNSLVDVYCKGRELEKAYKV 260
++ N LS + + D + F+ MGVT TYNS++ + K + A V
Sbjct: 593 DVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGV 652
Query: 261 LDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCI 320
LD+M E + D+ TY II GLG +G+ D A VL + + G Y D+ YN I
Sbjct: 653 LDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGK 712
Query: 321 AKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQS 380
A RL EA L D M S G+NP+ +YN + + L+ ++ M+ GC PN +
Sbjct: 713 ATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT 772
Query: 381 CMFLIRLFKKQEKV 394
L L K+ EK
Sbjct: 773 DTILDYLGKEMEKA 786
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 188/445 (42%), Gaps = 40/445 (8%)
Query: 53 QSLKSSGVFLSNELIDQVLKRVRFSHANPSQTLEFYRYT-GRRKGFFHTAFSLDTMLYIL 111
+SL ++ + +S ++ Q+L+R + +PS+ L+F+R+ R G+ H+A + + +
Sbjct: 46 RSLDANSIPISEPVVLQILRR---NSIDPSKKLDFFRWCYSLRPGYKHSATAYSQIFRTV 102
Query: 112 GRSRMFNHIWDLLIEARWK----DQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLV 167
R+ + + DLL + DQT+ + ++ L R+ K S +++
Sbjct: 103 CRTGLLGEVPDLLGSMKEDGVNLDQTM--AKILLDSLIRSGKFESALGVLDYMEEL---- 156
Query: 168 PDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKTPEDAEVFFK 227
+C N S+ D+ + KH+ R L LL D +
Sbjct: 157 ----GDCLNP---------SVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDT--G 201
Query: 228 KMREMGVTPDVVTYNSLVDVYCKG---RELEKAYKVLDEMRERDLSPDVITYTSIIGGLG 284
++ + P V N L+ + E ++ ++ L M+ D +Y I G G
Sbjct: 202 RVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKF--DTWSYNICIHGFG 259
Query: 285 LVGQPDKARDVLKEMKE----YGCY--PDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKG 338
G D A + KEMKE YG PD+ YN+ I C+ + ++A + DE+ G
Sbjct: 260 CWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSG 319
Query: 339 LNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMAL 398
P+ +TY + + S + + +Y M G P+T L+ K KV A
Sbjct: 320 HEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEAC 379
Query: 399 QLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLM 458
QL+ MV++G + ++L D L G+ F ++ +KGQ ++F + + +
Sbjct: 380 QLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQL 439
Query: 459 ELANRHEALQNLTQKMAVFGRPVQV 483
+ E L ++M G V +
Sbjct: 440 CREGKLEGAVKLVEEMETRGFSVDL 464
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 73/145 (50%), Gaps = 4/145 (2%)
Query: 167 VPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQF-RPNLQTFNILLSGWKT---PEDA 222
V D + +N+++ + ++ AR V + F ++ T+N+++ G + A
Sbjct: 625 VTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLA 684
Query: 223 EVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGG 282
++ + G D+V YN+L++ K L++A ++ D M+ ++PDV++Y ++I
Sbjct: 685 SAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEV 744
Query: 283 LGLVGQPDKARDVLKEMKEYGCYPD 307
G+ +A LK M + GC P+
Sbjct: 745 NSKAGKLKEAYKYLKAMLDAGCLPN 769
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 111/247 (44%), Gaps = 22/247 (8%)
Query: 84 TLEFYRYTGRRKGFFHTAFSLDTMLY--------ILGRSRMFNHIWD-LLIEARWKDQTL 134
L ++ R + ++F D Y + G+++ +WD L + D +
Sbjct: 267 ALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNS- 325
Query: 135 ITPRTVMVVLARTAKVCSVRQTVEFFR--RFKKLVPDFDTNCFNALLRTLCQEKSMTDAR 192
T +++ K + + + ++ VPD T +N LL + + +T+A
Sbjct: 326 ----TYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPD--TIVYNCLLDGTLKARKVTEAC 379
Query: 193 NVYHSLKHQ-FRPNLQTFNILLSGWKTPEDAEV---FFKKMREMGVTPDVVTYNSLVDVY 248
++ + + R + T+NIL+ G AE F +++ G D +T++ +
Sbjct: 380 QLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQL 439
Query: 249 CKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDV 308
C+ +LE A K+++EM R S D++T +S++ G G+ D ++K ++E P+V
Sbjct: 440 CREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNV 499
Query: 309 PAYNAAI 315
+NA +
Sbjct: 500 LRWNAGV 506
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 161/353 (45%), Gaps = 11/353 (3%)
Query: 95 KGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVM--VVLARTAKVCS 152
+G + + T++ L R + F+ + L+ + ++ + P T++ ++ +++ +
Sbjct: 348 EGHKPSLITYTTLVTALTRQKHFHSLLSLISKV---EKNGLKPDTILFNAIINASSESGN 404
Query: 153 VRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL--KHQFRPNLQTFN 210
+ Q ++ F + K+ + FN L++ + + ++ + + +PN +T N
Sbjct: 405 LDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCN 464
Query: 211 ILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCK-GRELEKAYKVLDEMRE 266
IL+ W + E+A KM+ GV PDVVT+N+L Y + G ++ M
Sbjct: 465 ILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLH 524
Query: 267 RDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLRE 326
+ P+V T +I+ G G+ ++A MKE G +P++ +N+ I+ F +
Sbjct: 525 NKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDG 584
Query: 327 AYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIR 386
++VD M G+ P+ T++ + D++ +Y M+ G P+ + L +
Sbjct: 585 VGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAK 644
Query: 387 LFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEM 439
+ + + E A Q+ M + G ++ + C G++ +A + + +M
Sbjct: 645 GYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKM 697
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 125/246 (50%), Gaps = 8/246 (3%)
Query: 168 PDFDTNCFNALLRTLCQEKSMTDARN--VYHSLKHQFRPNLQTFNILLSGW---KTPEDA 222
PD T FN L + + S A + + L ++ +PN++T +++G+ E+A
Sbjct: 493 PDVVT--FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEA 550
Query: 223 EVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGG 282
FF +M+E+GV P++ +NSL+ + +++ +V+D M E + PDV+T+++++
Sbjct: 551 LRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNA 610
Query: 283 LGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPN 342
VG + ++ +M E G PD+ A++ + + A +A ++++M G+ PN
Sbjct: 611 WSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPN 670
Query: 343 ATTYNLFFRIFYWSNDLQSSWNMYHRMMGL-GCHPNTQSCMFLIRLFKKQEKVEMALQLW 401
Y + + +++ + +Y +M G+ G PN + LI F + ++ A +L
Sbjct: 671 VVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELL 730
Query: 402 GDMVEK 407
DM K
Sbjct: 731 KDMEGK 736
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 115/263 (43%), Gaps = 4/263 (1%)
Query: 219 PEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTS 278
P++A F + E G P ++TY +LV + + ++ ++ + L PD I + +
Sbjct: 335 PQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNA 394
Query: 279 IIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMT-SK 337
II G D+A + ++MKE GC P +N I+ + +L E+ L+D M +
Sbjct: 395 IINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDE 454
Query: 338 GLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMA 397
L PN T N+ + + ++ +WN+ ++M G P+ + L + + + A
Sbjct: 455 MLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTA 514
Query: 398 LQL-WGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRR-IK 455
+ M+ + + C+ GK+ EA + F M E G P+ F IK
Sbjct: 515 EDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIK 574
Query: 456 VLMELANRHEALQNLTQKMAVFG 478
+ + N + + + M FG
Sbjct: 575 GFLNI-NDMDGVGEVVDLMEEFG 596
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 8/160 (5%)
Query: 152 SVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHS-LKHQFRPNLQTFN 210
V + V+ F + PD T F+ L+ M +Y L+ P++ F+
Sbjct: 584 GVGEVVDLMEEFG-VKPDVVT--FSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFS 640
Query: 211 ILLSGWK---TPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRE- 266
IL G+ PE AE +MR+ GV P+VV Y ++ +C E++KA +V +M
Sbjct: 641 ILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGI 700
Query: 267 RDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYP 306
LSP++ TY ++I G G QP KA ++LK+M+ P
Sbjct: 701 VGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVP 740
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 1/184 (0%)
Query: 272 DVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLV 331
DV + T ++ GL G+P +A + + E G P + Y + K L+
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 332 DEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQ 391
++ GL P+ +N S +L + ++ +M GC P + LI+ + K
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 392 EKVEMALQLWGDMV-EKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVS 450
K+E + +L M+ ++ ++L C+ K+ EA +M G KP V+
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 451 FRRI 454
F +
Sbjct: 498 FNTL 501
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 186/442 (42%), Gaps = 55/442 (12%)
Query: 2 LLKRCTFQSQSTFLPAPNLI--------LSRLLSSTLNDGDVHRVMTIITTTSSPENLRQ 53
++ RC+ + P NL+ + ++ STLN D ++ NLR
Sbjct: 18 IVPRCSNIPKPILNPLYNLLPQSQNPSKIVDVICSTLNHSDYSVLLP---------NLRD 68
Query: 54 SLKSSGVFLSNELIDQVLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGR 113
+KS L I +VL R + ++ S+ + F+++ G + +L+IL
Sbjct: 69 EVKSLIPHLGYPEISRVLLRFQ---SDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVS 125
Query: 114 SRMFNHIWDLL---IEARWKDQTLITPRTVMVVLARTAKVCSVRQTV------------- 157
S+ F L IE K + + V VL C+ V
Sbjct: 126 SKKFPLAMQFLCELIELTSKKEEV----DVFRVLVSATDECNWDPVVFDMLVKGYLKLGL 181
Query: 158 --EFFRRFKKLVPD-FDTNCF--NALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNI 211
E FR F++++ F + N LL L + M D VY + + PN TFNI
Sbjct: 182 VEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNI 241
Query: 212 LL------SGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMR 265
L S ++ +D F +KM E G PD+VTYN+LV YC+ L++A+ + M
Sbjct: 242 LTNVFCNDSNFREVDD---FLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMY 298
Query: 266 ERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLR 325
R + PD++TYTS+I GL G+ +A M + G PD +YN I +C ++
Sbjct: 299 RRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQ 358
Query: 326 EAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLI 385
++ L+ EM + P+ T + F L S+ N + L + C FLI
Sbjct: 359 QSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLI 418
Query: 386 RLFKKQEKVEMALQLWGDMVEK 407
++ K A L ++E+
Sbjct: 419 VSLCQEGKPFAAKHLLDRIIEE 440
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 93/218 (42%)
Query: 237 DVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVL 296
D V ++ LV Y K +E+ ++V E+ + S V+T ++ GL + + V
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 297 KEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWS 356
M G +P+ +N FC RE D +++M +G P+ TYN +
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 284
Query: 357 NDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVS 416
L+ ++ +Y M P+ + LI+ K +V A Q + MV++G +
Sbjct: 285 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSY 344
Query: 417 DVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
+ L C G + +++K EM+ P + + I
Sbjct: 345 NTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVI 382
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 122/292 (41%), Gaps = 25/292 (8%)
Query: 73 RVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQ 132
RVR +H QT F+R R G S +T++Y + M LL E
Sbjct: 321 RVREAH----QT--FHRMVDR--GIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSV 372
Query: 133 T--LITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTD 190
T + ++ R ++ S V RR K +P F+ F L+ +LCQE
Sbjct: 373 VPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIP-FEVCDF--LIVSLCQEGKPFA 429
Query: 191 ARNVYHSL----KHQFRPNLQTFNIL---LSGWKTPEDAEVFFKKMREMGVTPDVVTYNS 243
A+++ + H+ +P +T+N L LS E+A V K++ D TY +
Sbjct: 430 AKHLLDRIIEEEGHEAKP--ETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRA 487
Query: 244 LVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMK-EY 302
L+ C+ +A ++ EM + ++ PD +++ G DKA +L E+
Sbjct: 488 LIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEF 547
Query: 303 GCYPDVPAYNAAIRNFC-IAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIF 353
+ D +YN+ ++ C ++A +L + M G PN T ++
Sbjct: 548 RIF-DPESYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLIQVL 598
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 115/256 (44%)
Query: 226 FKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGL 285
++KM++ G P V YN ++D K + A V ++ +E L + T+ ++ GL
Sbjct: 216 YEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCK 275
Query: 286 VGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATT 345
G+ ++ ++L+ M+E C PDV AY A I+ L + + DEM + P+
Sbjct: 276 AGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMA 335
Query: 346 YNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMV 405
Y ++ + ++ M G + + LI F KV A LW D+V
Sbjct: 336 YGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLV 395
Query: 406 EKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHE 465
+ G+ + + + + LC + ++ +A K F IE+ +P + I V + NR
Sbjct: 396 DSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLS 455
Query: 466 ALQNLTQKMAVFGRPV 481
N+ +++ G PV
Sbjct: 456 DFSNVLERIGELGYPV 471
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 164/377 (43%), Gaps = 37/377 (9%)
Query: 78 HANPSQTLE-FYRYTGRRK-GFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLI 135
HA+ + L +Y Y +K GF F + ++ L ++ F+ L + +K+ L+
Sbjct: 203 HADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFD--LALAVYEDFKEDGLV 260
Query: 136 TPRTVMVVLART-AKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNV 194
T ++L + K + + +E +R ++ + D + A+++TL E ++ + V
Sbjct: 261 EESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRV 320
Query: 195 YHSLKHQFRPNLQTFNILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGREL 254
+ +MR + PDV+ Y +LV CK +
Sbjct: 321 W-------------------------------DEMRRDEIKPDVMAYGTLVVGLCKDGRV 349
Query: 255 EKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAA 314
E+ Y++ EM+ + + D Y +I G G+ A ++ +++ + G D+ YNA
Sbjct: 350 ERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAV 409
Query: 315 IRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGC 374
I+ C ++ +AY L + L P+ T + + N L N+ R+ LG
Sbjct: 410 IKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGY 469
Query: 375 HPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEK 434
+ F L +EK MAL ++ + KG GS + V ++L + L MG + ++
Sbjct: 470 PVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVS-VYNILMEALYKMGDIQKSLS 528
Query: 435 CFLEMIEKGQKPSNVSF 451
F EM + G +P + S+
Sbjct: 529 LFYEMRKLGFEPDSSSY 545
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 92/221 (41%), Gaps = 19/221 (8%)
Query: 136 TPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLC-QEKSMTDARNV 194
T +MV ++ +E V D+ T F + LC E+ A +V
Sbjct: 440 TLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFF----KLLCADEEKNAMALDV 495
Query: 195 YHSLKHQFRPNLQTFNILLSGWKTPEDAE---VFFKKMREMGVTPDVVTYNSLVDVYCKG 251
++ LK + ++ +NIL+ D + F +MR++G PD +Y+ + + +
Sbjct: 496 FYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEK 555
Query: 252 RELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPA- 310
+++ A +++ E P + Y S+ GL +G+ D +++E C +V +
Sbjct: 556 GDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRE-----CLGNVESG 610
Query: 311 -----YNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
Y + + C + +VDEM +G+ N Y
Sbjct: 611 PMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIY 651
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 109/227 (48%), Gaps = 4/227 (1%)
Query: 169 DFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTPED---AEV 224
D D AL++ C + A+ VY + K+ R + + I ++ D A
Sbjct: 606 DPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACS 665
Query: 225 FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLG 284
+K M+E VTPD V +++L+DV + L++A+ +L + + + + I+Y+S++G
Sbjct: 666 IYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACC 725
Query: 285 LVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNAT 344
KA ++ +++K P + NA I C +L +A + +DE+ + GL PN
Sbjct: 726 NAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTI 785
Query: 345 TYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQ 391
TY++ +D + S+ + + G G PN C + L K++
Sbjct: 786 TYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRCITSLCKRR 832
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 125/300 (41%), Gaps = 10/300 (3%)
Query: 149 KVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQ 207
K C ++ V+ RF KL+ + + FN L+ + + AR V ++ + +
Sbjct: 444 KACKKQRAVKEAFRFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCK 503
Query: 208 TFNILLSGWKTPEDAEVFFKKMREM---GVTPDVVTYNSLVDVYCKGRELEKAYKVLDEM 264
+ L+S + F+ +M GV ++ T+ +L+D + ++ KA+ +
Sbjct: 504 LYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGIL 563
Query: 265 RERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKE--YGCYPDVPAYNAAIRNFCIAK 322
R +++ PD + + ++I G G D+A DVL EMK + PD + A ++ C A
Sbjct: 564 RSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAG 623
Query: 323 RLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCM 382
++ A ++ + G+ Y + S D + ++Y M P+
Sbjct: 624 QVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFS 683
Query: 383 FLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEK 442
LI + + ++ A + D +G T+ L C+ +A LE+ EK
Sbjct: 684 ALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKA----LELYEK 739
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 135/320 (42%), Gaps = 10/320 (3%)
Query: 150 VCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTL---CQEKSMTDAR-NVYHSLKHQ-FRP 204
VC+ Q +E R +LV + L TL C + DA V+H + +
Sbjct: 476 VCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEA 535
Query: 205 NLQTFNILLSG-WKTPEDAEVF--FKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVL 261
NL TF L+ G + + A+ F + +R V PD V +N+L+ + +++A+ VL
Sbjct: 536 NLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVL 595
Query: 262 DEMRERD--LSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFC 319
EM+ + PD I+ +++ GQ ++A++V + + +YG Y A+ +
Sbjct: 596 AEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCS 655
Query: 320 IAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQ 379
+ A + +M K + P+ ++ + + L ++ + G T
Sbjct: 656 KSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTI 715
Query: 380 SCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEM 439
S L+ + + AL+L+ + + L LC+ +L +A + E+
Sbjct: 716 SYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEI 775
Query: 440 IEKGQKPSNVSFRRIKVLME 459
G KP+ +++ + + E
Sbjct: 776 KTLGLKPNTITYSMLMLASE 795
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 114/247 (46%), Gaps = 12/247 (4%)
Query: 162 RFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLK---HQFRPNLQTFNILLSGWKT 218
R K + PD FNAL+ Q ++ A +V +K H P+ + L+
Sbjct: 564 RSKNVKPD--RVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCN 621
Query: 219 P---EDAEVFFKKMREMGV--TPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDV 273
E A+ ++ + + G+ TP+V Y V+ K + + A + +M+E+D++PD
Sbjct: 622 AGQVERAKEVYQMIHKYGIRGTPEV--YTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDE 679
Query: 274 ITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDE 333
+ ++++I G D+A +L++ K G +Y++ + C AK ++A +L ++
Sbjct: 680 VFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEK 739
Query: 334 MTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEK 393
+ S L P +T N N L + + LG PNT + L+ ++++
Sbjct: 740 IKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDD 799
Query: 394 VEMALQL 400
E++ +L
Sbjct: 800 FEVSFKL 806
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 122/301 (40%), Gaps = 24/301 (7%)
Query: 177 ALLRTLCQEKSMTDARNVYHS-----------LKHQFR-------PNLQTFNILLSGWKT 218
+LL L Q + + D +YH+ +K FR P + TFN+L+S +
Sbjct: 421 SLLEDLDQ-RDLLDMDKIYHASFFKACKKQRAVKEAFRFTKLILNPTMSTFNMLMSVCAS 479
Query: 219 PED---AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVIT 275
+D A + ++E G+T D Y +L+ K +++ ++V +M + ++ T
Sbjct: 480 SQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHT 539
Query: 276 YTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMT 335
+ ++I G GQ KA ++ PD +NA I + + A+D++ EM
Sbjct: 540 FGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMK 599
Query: 336 SKG--LNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEK 393
++ ++P+ + + + ++ + +Y + G + + K
Sbjct: 600 AETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGD 659
Query: 394 VEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRR 453
+ A ++ DM EK + L D+ L EA + +G + +S+
Sbjct: 660 WDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSS 719
Query: 454 I 454
+
Sbjct: 720 L 720
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 140/312 (44%), Gaps = 12/312 (3%)
Query: 73 RVRFSHANPSQTLEFYR---YTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARW 129
R F + N Q + F++ G ++ + G +R + D+ +E +
Sbjct: 217 RCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCY 276
Query: 130 KDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMT 189
D ++T +++ R + V ++ + +T +N LL +LC +
Sbjct: 277 PD--IVTYNSLVNYNCRRGNLEEVASVIQHILSHGL---ELNTVTYNTLLHSLCSHEYWD 331
Query: 190 DARNVYHSL-KHQFRPNLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLV 245
+ + + + + + P + T+NIL++G + A FF +M E PD+VTYN+++
Sbjct: 332 EVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVL 391
Query: 246 DVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCY 305
K ++ A ++L ++ P +ITY S+I GL G KA ++ +M + G +
Sbjct: 392 GAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIF 451
Query: 306 PDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNM 365
PD + I FC A + EA ++ E +++G +TY L + +++ + +
Sbjct: 452 PDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEV 511
Query: 366 YHRMMGLGCHPN 377
M+ GC P+
Sbjct: 512 VEIMLTGGCKPD 523
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 144/352 (40%), Gaps = 52/352 (14%)
Query: 129 WKDQ------TLITPRTVMVVLARTAKVCSVRQTVEFFRRF--KKLVPDFDTNCFNALLR 180
WKDQ + TV+V L + C + +E + PD T +N+L+
Sbjct: 232 WKDQLQNGCPPFMITYTVLVELV--CRYCGSARAIEVLEDMAVEGCYPDIVT--YNSLVN 287
Query: 181 TLCQEKSMTDARNVY-HSLKHQFRPNLQTFNILLSGWKTPE---DAEVFFKKMREMGVTP 236
C+ ++ + +V H L H N T+N LL + E + E M + P
Sbjct: 288 YNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCP 347
Query: 237 DVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVL 296
V+TYN L++ CK R L +A +M E+ PD++TY +++G + G D A ++L
Sbjct: 348 TVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELL 407
Query: 297 KEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWS 356
+K C P + YN+ I D + KGL
Sbjct: 408 GLLKNTCCPPGLITYNSVI----------------DGLAKKGL----------------- 434
Query: 357 NDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVS 416
++ + +YH+M+ G P+ + LI F + VE A Q+ + +G G
Sbjct: 435 --MKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTY 492
Query: 417 DVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI-KVLMELANRHEAL 467
++ LC ++ A + M+ G KP + I K + E+ EA+
Sbjct: 493 RLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAV 544
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/330 (20%), Positives = 148/330 (44%), Gaps = 20/330 (6%)
Query: 167 VPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRP-NLQTFNILLS---GWKTPEDA 222
VPD T +N ++ LC++ + A + + P ++ T+N ++ + E A
Sbjct: 171 VPDTIT--YNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQA 228
Query: 223 EVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGG 282
F+K + G P ++TY LV++ C+ +A +VL++M PD++TY S++
Sbjct: 229 IRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNY 288
Query: 283 LGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPN 342
G ++ V++ + +G + YN + + C + E ++++ M P
Sbjct: 289 NCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPT 348
Query: 343 ATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWG 402
TYN+ + L + + +++M+ C P+ + ++ K+ V+ A++L G
Sbjct: 349 VITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLG 408
Query: 403 DMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI-------- 454
+ + + + D L G + +A + + +M++ G P +++ R +
Sbjct: 409 LLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRAN 468
Query: 455 ------KVLMELANRHEALQNLTQKMAVFG 478
+VL E +NR ++ T ++ + G
Sbjct: 469 LVEEAGQVLKETSNRGNGIRGSTYRLVIQG 498
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 124/290 (42%), Gaps = 6/290 (2%)
Query: 169 DFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTPED---AEV 224
D +TN N +L LC +TDA + + +H P+ + + L+ G + A
Sbjct: 103 DEETN--NEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMC 160
Query: 225 FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLG 284
+ M G PD +TYN ++ CK + A +L++M PDVITY ++I +
Sbjct: 161 ILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMF 220
Query: 285 LVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNAT 344
G ++A K+ + GC P + Y + C A +++++M +G P+
Sbjct: 221 DYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIV 280
Query: 345 TYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDM 404
TYN +L+ ++ ++ G NT + L+ E + ++ M
Sbjct: 281 TYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIM 340
Query: 405 VEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
+ + + ++L + LC L A F +M+E+ P V++ +
Sbjct: 341 YQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTV 390
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 114/239 (47%), Gaps = 4/239 (1%)
Query: 152 SVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARN-VYHSLKHQFRPNLQTFN 210
+V Q +E ++ + D+ +N ++R LC +M A + +K P++ T+N
Sbjct: 280 NVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYN 339
Query: 211 ILLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRER 267
L+S ++A M+ GV PD ++Y ++ C ++ +A + L M +
Sbjct: 340 TLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKS 399
Query: 268 DLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREA 327
L P+V+ + +I G G G A VL M YG P+V NA I + RL +A
Sbjct: 400 SLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDA 459
Query: 328 YDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIR 386
+ + +EM S ++P+ TTYNL L+ ++ +Y M+ GC P+ + L+R
Sbjct: 460 WWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVR 518
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/379 (20%), Positives = 154/379 (40%), Gaps = 43/379 (11%)
Query: 143 VLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQ 201
+L K + + R +++ P + +N L++ LC ++ A +++++ K+
Sbjct: 162 LLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYG 221
Query: 202 FRPNLQTFNILL-----------------------SGWKTPEDAEV-------------- 224
RPN T NI++ S P D +
Sbjct: 222 IRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNV 281
Query: 225 -----FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
+K+M + V D V YN ++ C + AY + +M +R ++PDV TY ++
Sbjct: 282 VQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTL 341
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
I L G+ D+A D+ M+ G PD +Y I+ CI + A + + M L
Sbjct: 342 ISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSL 401
Query: 340 NPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQ 399
P +N+ + D S+ ++ + M+ G PN + LI + K ++ A
Sbjct: 402 LPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWW 461
Query: 400 LWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLME 459
+ +M T ++L C +G L A + + EM+ +G +P +++ + +
Sbjct: 462 VKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLC 521
Query: 460 LANRHEALQNLTQKMAVFG 478
R + ++L ++ G
Sbjct: 522 WKGRLKKAESLLSRIQATG 540
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 140/345 (40%), Gaps = 52/345 (15%)
Query: 149 KVCSVRQTVEFFRRFKKLVPDFDTNCFN---ALLRTLCQEKSMTDARNVYHSLKHQ-FRP 204
++ S+R++V + F D+D +C + +++R LC + + A + + + P
Sbjct: 101 RLASLRESVCQTKSF-----DYD-DCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIP 154
Query: 205 NLQTFNILLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVL 261
L T N LL+G E A+ ++MREMG +P+ V+YN+L+ C ++KA +
Sbjct: 155 GLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLF 214
Query: 262 DEMRERDLSPDVITYTSIIGGL---GLVGQPDK--------------------------- 291
+ M + + P+ +T I+ L G++G +K
Sbjct: 215 NTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDS 274
Query: 292 ---------ARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPN 342
A +V KEM + D YN IR C + + AY + +M +G+NP+
Sbjct: 275 CFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPD 334
Query: 343 ATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWG 402
TYN + +++ M G P+ S +I+ V A +
Sbjct: 335 VFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLL 394
Query: 403 DMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPS 447
M++ L+ +V+ D G A M+ G KP+
Sbjct: 395 SMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPN 439
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 93/240 (38%), Gaps = 46/240 (19%)
Query: 276 YTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMT 335
++SI+ L L G+ D A + K+M G P + +N + C A + +A LV EM
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 336 SKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFK------ 389
G +PN +YN + N++ + +++ M G PN +C ++
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIG 243
Query: 390 ---------------------------------KQEKVEMALQLWGDMVEKGFGSYTLVS 416
K V AL++W +M +K + ++V
Sbjct: 244 NNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVY 303
Query: 417 DVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLM-------ELANRHEALQN 469
+V+ LC G + A +M+++G P ++ + + E + H +QN
Sbjct: 304 NVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQN 363
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 114/259 (44%), Gaps = 1/259 (0%)
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
E+A V +M + G+ + + YN+L+D Y K +E+ + EMR++ L P TY +
Sbjct: 361 EEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNIL 420
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLRE-AYDLVDEMTSKG 338
+ QPD +L+EM++ G P+V +Y I + K++ + A D M G
Sbjct: 421 MDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVG 480
Query: 339 LNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMAL 398
L P++ +Y + S + ++ + M G P+ ++ ++ F++ +
Sbjct: 481 LKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLM 540
Query: 399 QLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLM 458
++W M+ + + + L D G EA E + G +PS +++ +
Sbjct: 541 EIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAY 600
Query: 459 ELANRHEALQNLTQKMAVF 477
+ L L ++MA
Sbjct: 601 ARGGQDAKLPQLLKEMAAL 619
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 122/286 (42%), Gaps = 15/286 (5%)
Query: 94 RKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWK--DQTLITPRTVMVVLARTAKVC 151
+KG +T++ +S + L E R K + T +M AR +
Sbjct: 372 KKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPD 431
Query: 152 SVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTD-ARNVYHSLKH-QFRPNLQTF 209
V R + L + + + L+ + K M+D A + + +K +P+ ++
Sbjct: 432 IVET---LLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSY 488
Query: 210 NILL-----SGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEM 264
L+ SGW E A F++M + G+ P V TY S++D + + + K ++ M
Sbjct: 489 TALIHAYSVSGWH--EKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLM 546
Query: 265 RERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRL 324
+ ITY +++ G G +ARDV+ E + G P V YN + + +
Sbjct: 547 LREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQD 606
Query: 325 REAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMM 370
+ L+ EM + L P++ TY+ F D + ++ YH+MM
Sbjct: 607 AKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAF-FYHKMM 651
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 6/254 (2%)
Query: 199 KHQFRPNLQTFNILLSGWKTPE---DAEVFFKKMREMGVTPDVVTYNSLVDVYCK-GREL 254
K +FR +++ +N +SG + DA ++ M ++ V PD VT L+ K GR
Sbjct: 267 KEEFR-DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSA 325
Query: 255 EKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAA 314
++ +++ ++M E+ + + ++ G ++A + EM++ G + YN
Sbjct: 326 KEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTL 385
Query: 315 IRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGC 374
+ + + + E L EM KGL P+A TYN+ + + M LG
Sbjct: 386 MDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGL 445
Query: 375 HPNTQSCMFLIRLFKKQEKV-EMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAE 433
PN +S LI + + +K+ +MA + M + G + L G +A
Sbjct: 446 EPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAY 505
Query: 434 KCFLEMIEKGQKPS 447
F EM ++G KPS
Sbjct: 506 ASFEEMCKEGIKPS 519
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 98/236 (41%), Gaps = 13/236 (5%)
Query: 116 MFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCF 175
+ + DL +E K T + + RT K+ + + F R KK+ ++ +
Sbjct: 436 LLREMEDLGLEPNVKSYTCL-----ISAYGRTKKMSDM--AADAFLRMKKVGLKPSSHSY 488
Query: 176 NALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTPEDA----EVFFKKMR 230
AL+ A + + K +P+++T+ +L ++ D E++ +R
Sbjct: 489 TALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLR 548
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
E + +TYN+L+D + K +A V+ E + L P V+TY ++ GQ
Sbjct: 549 E-KIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDA 607
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
K +LKEM PD Y+ I F + + A+ M G P+ +Y
Sbjct: 608 KLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSY 663
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 7/182 (3%)
Query: 307 DVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNP-NATTYNLFFRIFYWSNDLQSSWNM 365
DV YNAAI ++R +A+++ + M + P N T L + + W +
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 366 YHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCD 425
+ +M G + L++ F + E AL + +M +KG S T+V + L D
Sbjct: 332 FEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNK 391
Query: 426 MGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRH---EALQNLTQKMAVFGRPVQ 482
+ E E F EM +KG KPS ++ +LM+ R + ++ L ++M G
Sbjct: 392 SNHIEEVEGLFTEMRDKGLKPSAATY---NILMDAYARRMQPDIVETLLREMEDLGLEPN 448
Query: 483 VR 484
V+
Sbjct: 449 VK 450
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 132/304 (43%), Gaps = 5/304 (1%)
Query: 144 LARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFR 203
LAR + + V+++ +F ++L N +LR D ++ ++ +
Sbjct: 70 LARKSAISEVQRSSDFLSSLQRLATVLKVQDLNVILRDFGISGRWQDLIQLFEWMQQHGK 129
Query: 204 PNLQTFN--ILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVL 261
++ T++ I G K A ++ + + +V NS++ K +L+ K+
Sbjct: 130 ISVSTYSSCIKFVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLF 189
Query: 262 DEMRERDLSPDVITYTSIIGGLGLV--GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFC 319
D+M+ L PDV+TY +++ G V G P KA +++ E+ G D Y +
Sbjct: 190 DQMKRDGLKPDVVTYNTLLAGCIKVKNGYP-KAIELIGELPHNGIQMDSVMYGTVLAICA 248
Query: 320 IAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQ 379
R EA + + +M +G +PN Y+ + W D + + + M +G PN
Sbjct: 249 SNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKV 308
Query: 380 SCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEM 439
L++++ K + + +L ++ G+ + +L D L GKL EA F +M
Sbjct: 309 MMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDM 368
Query: 440 IEKG 443
KG
Sbjct: 369 KGKG 372
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 121/271 (44%), Gaps = 7/271 (2%)
Query: 170 FDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKTPED---AEVF 225
D+ + +L +A N +K + PN+ ++ LL+ + D A+
Sbjct: 235 MDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADEL 294
Query: 226 FKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGL 285
+M+ +G+ P+ V +L+ VY KG +++ ++L E+ + + + Y ++ GL
Sbjct: 295 MTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSK 354
Query: 286 VGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATT 345
G+ ++AR + +MK G D A + I C +KR +EA +L + + +
Sbjct: 355 AGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVM 414
Query: 346 YNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMV 405
N + + +++S M +M P+ + LI+ F K++ +A Q DM
Sbjct: 415 LNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMH 474
Query: 406 EKGFGSYTLVSDVLFDLLCDMGKLGEAEKCF 436
KG + L ++ L+ +GK+ + F
Sbjct: 475 SKG---HRLEEELCSSLIYHLGKIRAQAEAF 502
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 154/357 (43%), Gaps = 22/357 (6%)
Query: 26 LSSTLNDGDVHRVMTIITTTSSPENLRQSLKSSGVFLSNELIDQVLKRVRFSHANPSQTL 85
++ST+ D + T++ S E L +LKSSGV L + + ++ R+ + +
Sbjct: 560 ITSTMID-----IYTVMGEFSEAEKLYLNLKSSGVVL-DRIGFSIVVRMYVKAGSLEEAC 613
Query: 86 EFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEAR-----WKDQTLITPRTV 140
+K + ML I + + + + L R W + V
Sbjct: 614 SVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMY---NCV 670
Query: 141 MVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKH 200
+ AR + + T E R+ P+ T FN LL + K ++ K
Sbjct: 671 INCCARALPLDELSGTFEEMIRYG-FTPN--TVTFNVLLDVYGKAKLFKKVNELFLLAKR 727
Query: 201 QFRPNLQTFNILLSGWKTPEDAEVFFKKMREM---GVTPDVVTYNSLVDVYCKGRELEKA 257
++ ++N +++ + +D ++ M G + + YN+L+D Y K +++EK
Sbjct: 728 HGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKF 787
Query: 258 YKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRN 317
+L M++ PD TY +I G G D+ DVLKE+KE G PD+ +YN I+
Sbjct: 788 RSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKA 847
Query: 318 FCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSS--WNMYHRMMGL 372
+ I + EA LV EM + + P+ TY +++ + W+++ + MG+
Sbjct: 848 YGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMGI 904
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 162/371 (43%), Gaps = 47/371 (12%)
Query: 65 ELIDQVLKRVR-FSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDL 123
E + +LKR+ S N + ++ R G+ G F A+SL +L +LGR ++ DL
Sbjct: 140 EHCNGILKRLESCSDTNAIKFFDWMRCNGKLVGNF-VAYSL--ILRVLGRREEWDRAEDL 196
Query: 124 LIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLC 183
+ E +C F F+K FN ++
Sbjct: 197 IKE-----------------------LCG-------FHEFQK-----SYQVFNTVIYACT 221
Query: 184 QEKSMTDARNVYHS-LKHQFRPNLQTFNILLSGWK---TPEDAEVFFKKMREMGVTPDVV 239
++ ++ A +H L+ RPN+ T +L+ ++ E+AE F MR+ G+ +
Sbjct: 222 KKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCES- 280
Query: 240 TYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEM 299
Y+S++ +Y + R +KA +V+D M++ + + + ++ G+ + A +L M
Sbjct: 281 AYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSM 340
Query: 300 KEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDL 359
+ G P++ AYN I + ++ A L + + GL P+ T+Y + +++
Sbjct: 341 EAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNY 400
Query: 360 QSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG-SYTLVSDV 418
+ + + Y + G PN+ + LI L K + A++ DM G G Y+ + +
Sbjct: 401 EEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMT--GIGCQYSSILGI 458
Query: 419 LFDLLCDMGKL 429
+ +GK+
Sbjct: 459 ILQAYEKVGKI 469
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 137/293 (46%), Gaps = 14/293 (4%)
Query: 154 RQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNIL 212
RQ V ++ +KL ++ + A + L K +T+A+ V + +F + + L
Sbjct: 277 RQVV--LKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDAL 334
Query: 213 LSGWKT--PEDAEVFFKKMREMGVTPDVVTYNSLVDVYC---KGRELEKAYKVLDEMRER 267
+ P+ A F M G P + T + L C K L KAY++L +
Sbjct: 335 IGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSS---K 391
Query: 268 DLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREA 327
++ +Y+ +I L G+ ++ L+EMK+ G PDV YNA I C A+ +R A
Sbjct: 392 GYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPA 451
Query: 328 YDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRL 387
L DEM +G N TTYN+ R + + S ++ +M+ G P+ M LI
Sbjct: 452 KKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEG 511
Query: 388 FKKQEKVEMALQLWGDMVEKGFGSYT--LVSDVLFDLLCDMGKLGEAEKCFLE 438
K+ K+E A++++ +E+ + T ++S+ + + LC G GEA + E
Sbjct: 512 LCKETKIEAAMEVFRKCMERDHKTVTRRVLSEFVLN-LCSNGHSGEASQLLRE 563
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 126/307 (41%), Gaps = 40/307 (13%)
Query: 178 LLRTLCQEKSMTDARNVYHSLKH-QFRPNLQTFNILLSGWKTPEDA---EVFFKKMREMG 233
+L +LC+ DA + L++ +P+ + ++ + + +V KK R++G
Sbjct: 229 ILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLG 288
Query: 234 VTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKAR 293
V P Y + + + L +A +V + + D ++IG + V PD A
Sbjct: 289 VAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAV-DPDSAV 347
Query: 294 DVLKEM-----------------------------KEY------GCYPDVPAYNAAIRNF 318
+ L M K Y G + ++ +Y+ I
Sbjct: 348 EFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFL 407
Query: 319 CIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNT 378
C A R+RE+Y + EM +GL P+ + YN + ++ + ++ M GC N
Sbjct: 408 CKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNL 467
Query: 379 QSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLE 438
+ LIR ++ + E +L+L+ M+E+G + L + LC K+ A + F +
Sbjct: 468 TTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRK 527
Query: 439 MIEKGQK 445
+E+ K
Sbjct: 528 CMERDHK 534
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 90/442 (20%), Positives = 165/442 (37%), Gaps = 89/442 (20%)
Query: 51 LRQSLKSSGV--FLSNELIDQVLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTML 108
+ QSL G +S L+ +V+ +H S L F+ + ++ G+ H + S ++
Sbjct: 32 IEQSLHGLGFRHSISPSLVARVIDPFLLNH--HSLALGFFNWAAQQPGYSHDSISYHSIF 89
Query: 109 YILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVP 168
L SR F+ + L F++ K
Sbjct: 90 KSLSLSRQFSAMDAL------------------------------------FKQVKSNKI 113
Query: 169 DFDTNCFNALLRTLCQEKSMTDARNVYH---SLKHQFRPNLQTFNILLSGWKTP---EDA 222
D++ + +L+ TL + A V S + P++ N LL+G + + A
Sbjct: 114 LLDSSVYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDV--CNRLLAGLTSDGCYDYA 171
Query: 223 EVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEK-------------------------- 256
+ F KMR GV+ + + + + +C+ E +
Sbjct: 172 QKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLILH 231
Query: 257 ----------AYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYP 306
A+ +L+E+R D PD + Y I + G + + VLK+ ++ G P
Sbjct: 232 SLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAP 291
Query: 307 DVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNP--NATTYNLFFRIFYWSNDLQSSWN 364
Y A I + AKRL EA + V E+ G P N L + D +
Sbjct: 292 RSSDYRAFILDLISAKRLTEAKE-VAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFL 350
Query: 365 MYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLC 424
+Y M+ G P ++ L + + +K + ++ + + KG+ S ++ LC
Sbjct: 351 VY--MVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLC 408
Query: 425 DMGKLGEAEKCFLEMIEKGQKP 446
G++ E+ EM ++G P
Sbjct: 409 KAGRVRESYTALQEMKKEGLAP 430
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 123/293 (41%), Gaps = 44/293 (15%)
Query: 120 IWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNC----- 174
+ LL E KD L +V T +CS R + R +K+V + C
Sbjct: 461 VESLLGEIARKDANLAAVGLAVV----TTALCSQRNYIAALSRIEKMV---NLGCTPLPF 513
Query: 175 -FNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKTPEDAEVFFKKMREMG 233
+N++++ L QE NI+ ED ++E+
Sbjct: 514 SYNSVIKCLFQE------------------------NII-------EDLASLVNIIQELD 542
Query: 234 VTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKAR 293
PDV TY +V+ CK + + A+ ++D M E L P V Y+SIIG LG G+ +A
Sbjct: 543 FVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAE 602
Query: 294 DVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIF 353
+ +M E G PD AY I + R+ EA +LV+E+ L P++ TY + F
Sbjct: 603 ETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGF 662
Query: 354 YWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE 406
++ +M+ G PN LI F K+ + + L+G M E
Sbjct: 663 VKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGE 715
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 86/175 (49%), Gaps = 3/175 (1%)
Query: 234 VTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKAR 293
+ P++ +N+++ YC L++AY L+ M++ + P+++TYT ++ G + A
Sbjct: 790 IIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAI 849
Query: 294 DVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIF 353
D+ + C PD Y+ ++ C KR +A L+ EM G+NPN +Y +
Sbjct: 850 DLFEGTN---CEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCL 906
Query: 354 YWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKG 408
+S + + M L P + + +LI + +++K+ A L+ MV+ G
Sbjct: 907 CYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSG 961
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 106/252 (42%), Gaps = 14/252 (5%)
Query: 161 RRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKTPE 220
R FK L N +L TLC M N+Y SL + F
Sbjct: 206 RLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCF-----------CKRGCAA 254
Query: 221 DAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSII 280
+AE F M G D V Y L+ YCK + A ++ M ER D + ++I
Sbjct: 255 EAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLI 314
Query: 281 GGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDL-VDEMTSKGL 339
G +G DK R + +M + G +V Y+ I ++C + A L V+ S+ +
Sbjct: 315 HGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDI 374
Query: 340 NPNATTY-NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMAL 398
+ N Y NL F FY + + ++ RM+ G P+ + L+++ K +++ A+
Sbjct: 375 SRNVHCYTNLIFG-FYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAM 433
Query: 399 QLWGDMVEKGFG 410
+ +++ G G
Sbjct: 434 VILQSILDNGCG 445
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/350 (19%), Positives = 136/350 (38%), Gaps = 69/350 (19%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVY-HSLKHQFRPNLQTFNILLSGW---KTPEDAEVFF 226
D + L++ C++ +MT A +Y ++ F + FN L+ G+ + V F
Sbjct: 271 DKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMF 330
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKV-LDEMRERDLSPDVITYTSIIGGLGL 285
+M + GV +V TY+ ++ YCK ++ A ++ ++ D+S +V YT++I G
Sbjct: 331 SQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYK 390
Query: 286 VGQPDKARD-----------------------------------VLKEMKEYGCYPDVPA 310
G DKA D +L+ + + GC + P
Sbjct: 391 KGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPV 450
Query: 311 YN-----------------------AAI------RNFCIAKRLREAYDLVDEMTSKGLNP 341
+ AA+ C + A +++M + G P
Sbjct: 451 IDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTP 510
Query: 342 NATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLW 401
+YN + + N ++ ++ + + L P+ + + ++ K+ + A +
Sbjct: 511 LPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAII 570
Query: 402 GDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
M E G + + L G++ EAE+ F +M+E G +P +++
Sbjct: 571 DAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAY 620
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 115/278 (41%), Gaps = 32/278 (11%)
Query: 194 VYHSLKHQFRPNLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCK 250
V +KH RP+ T+ +L+SG+ E + KM E G++P+VV Y +L+ + K
Sbjct: 640 VEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLK 699
Query: 251 GRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPA 310
+ + ++ + M E D+ D I Y +++ GL K R V+ E P
Sbjct: 700 KGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVE----------PG 749
Query: 311 YNAAIRNFCIAKRLRE-------------AYDLVDEMTSKGLNPNATTYNLFFRIFYWSN 357
++ K L A +++ ++ K + PN +N + +
Sbjct: 750 KEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKV-KKSIIPNLYLHNTIITGYCAAG 808
Query: 358 DLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLW-GDMVEKGFGSYTLVS 416
L ++N M G PN + L++ + +E A+ L+ G E Y+
Sbjct: 809 RLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEGTNCEPDQVMYS--- 865
Query: 417 DVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
L LCD + +A LEM + G P+ S+ ++
Sbjct: 866 -TLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKL 902
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 112/268 (41%), Gaps = 28/268 (10%)
Query: 94 RKGFFHTAFSLDTMLYILGRSRM-FNHI-WDLLIEARW-------KDQTLITP--RTVMV 142
+KG F +F T+ ++G + + +HI + L+ W K Q ++ P ++
Sbjct: 699 KKGDFKFSF---TLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQ 755
Query: 143 VLARTAKVCSVRQTV----------EFFRRFKK-LVPDFDTNCFNALLRTLCQEKSMTDA 191
L RT + S+ ++ E + KK ++P+ + N ++ C + +A
Sbjct: 756 RLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLH--NTIITGYCAAGRLDEA 813
Query: 192 RNVYHSL-KHQFRPNLQTFNILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCK 250
N S+ K PNL T+ IL+ D E PD V Y++L+ C
Sbjct: 814 YNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEGTNCEPDQVMYSTLLKGLCD 873
Query: 251 GRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPA 310
+ A ++ EM++ ++P+ +Y ++ L +A V+K+M +P
Sbjct: 874 FKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSIN 933
Query: 311 YNAAIRNFCIAKRLREAYDLVDEMTSKG 338
+ I C K+LREA L M G
Sbjct: 934 HTWLIYILCEEKKLREARALFAIMVQSG 961
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 130/302 (43%), Gaps = 2/302 (0%)
Query: 179 LRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKTPEDAEVFFKKMREMGVTP- 236
++ L +E + +A VY+ LK ++ T N +L G + F++ +EM +
Sbjct: 152 VKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEF 211
Query: 237 DVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVL 296
D L+ C G ++ + Y++L + ++ L P Y +I G +G +VL
Sbjct: 212 DSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVL 271
Query: 297 KEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWS 356
M + +P + Y I+ C+ K+ EAY + + KG P+ Y R F
Sbjct: 272 HTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEK 331
Query: 357 NDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVS 416
L S+ ++ M+ G PN + +I K+ ++ + + +M+ G+G L
Sbjct: 332 GWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSC 391
Query: 417 DVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEALQNLTQKMAV 476
+ + C GK EA + F M E G P+ +++ + N+ E L +++
Sbjct: 392 NTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKA 451
Query: 477 FG 478
G
Sbjct: 452 LG 453
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 133/312 (42%), Gaps = 13/312 (4%)
Query: 96 GFFHTAFSLDTMLYILGRSRMFNHIWDL---LIEARWKDQTLITPRTVMVVLARTAKVCS 152
G + + +++L ++R + W+L ++E+ + + + R ++ L
Sbjct: 175 GISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERI---RCLIRALCDGG---D 228
Query: 153 VRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNI 211
V + E ++ K D + L+ C+ + V H++ P++ +
Sbjct: 229 VSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQK 288
Query: 212 LLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERD 268
++ G K +A FK +++ G PD V Y +++ +C+ L A K+ EM ++
Sbjct: 289 IIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKG 348
Query: 269 LSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAY 328
+ P+ Y +I G G+ EM G + + N I+ FC + EA+
Sbjct: 349 MRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAF 408
Query: 329 DLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLF 388
++ M+ G+ PNA TYN + F N ++ +Y + LG P+ + L+R
Sbjct: 409 EIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNL 468
Query: 389 KKQEKVEMALQL 400
K + V +L L
Sbjct: 469 KMSDSVATSLNL 480
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 102/240 (42%), Gaps = 1/240 (0%)
Query: 212 LLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSP 271
L G E E+ + +++ G+ P Y L+ +C+ +VL M + P
Sbjct: 223 LCDGGDVSEGYELLKQGLKQ-GLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFP 281
Query: 272 DVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLV 331
+ Y II GL + + +A + K +K+ G PD Y IR FC L A L
Sbjct: 282 SMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLW 341
Query: 332 DEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQ 391
EM KG+ PN YN+ + ++ Y+ M+ G SC +I+ F
Sbjct: 342 FEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSH 401
Query: 392 EKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
K + A +++ +M E G + + L C K+ + K + E+ G KPS +++
Sbjct: 402 GKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAY 461
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 115/278 (41%), Gaps = 10/278 (3%)
Query: 200 HQFRPNLQTFNILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYK 259
+ + P + NIL + + + G P+ V + +E+A +
Sbjct: 107 YDYTPGPVSLNILFGALLDGKAVKAAKSFLDTTGFKPEPTLLEQYVKCLSEEGLVEEAIE 166
Query: 260 VLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFC 319
V + +++ +S V+T S++ G + D+ ++ KEM E D IR C
Sbjct: 167 VYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVE--SEFDSERIRCLIRALC 224
Query: 320 IAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQ 379
+ E Y+L+ + +GL+P Y F + + H M+ P+
Sbjct: 225 DGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMY 284
Query: 380 SCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEM 439
+I+ +K A ++ ++ +KG+ +V + C+ G LG A K + EM
Sbjct: 285 IYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEM 344
Query: 440 IEKGQKPSNVS--------FRRIKVLMELANRHEALQN 469
I+KG +P+ + F+R ++ + A +E L+N
Sbjct: 345 IKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRN 382
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 141/310 (45%), Gaps = 9/310 (2%)
Query: 139 TVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTD-ARNVYHS 197
+V LAR +V Q ++ F + + PD + F L +M D + + +
Sbjct: 80 VAVVTLAREKHFVAVSQLLDGFIQNQ---PDPKSESFAVRAIILYGRANMLDRSIQTFRN 136
Query: 198 LKHQFRP-NLQTFNILLSGWKTPEDAE----VFFKKMREMGVTPDVVTYNSLVDVYCKGR 252
L+ P +++ N LL +D + V+ + + G+ PD+ TYN ++ V C+
Sbjct: 137 LEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESG 196
Query: 253 ELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYN 312
+Y ++ EM + + P ++ +I G + D+ R V++ M E+G + V YN
Sbjct: 197 STSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYN 256
Query: 313 AAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGL 372
I+ C K+ EA L+D + S + PN+ TY+L F +L + N++ M+
Sbjct: 257 IMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCN 316
Query: 373 GCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEA 432
G P+++ LI K E AL L + +EK + V L + L K+ EA
Sbjct: 317 GYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEA 376
Query: 433 EKCFLEMIEK 442
++ + EK
Sbjct: 377 KELIAVVKEK 386
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 88/223 (39%), Gaps = 2/223 (0%)
Query: 247 VYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEM-KEYGCY 305
+Y + L+++ + + + ++ V + +++ + +A V EM K YG
Sbjct: 120 LYGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIE 179
Query: 306 PDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNM 365
PD+ YN IR C + +Y +V EM K + P A ++ L FY +
Sbjct: 180 PDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKV 239
Query: 366 YHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCD 425
M G H + +I+ K++K A L ++ ++ +L C
Sbjct: 240 MRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCS 299
Query: 426 MGKLGEAEKCFLEMIEKGQKP-SNVSFRRIKVLMELANRHEAL 467
L EA F M+ G KP S F I L + + AL
Sbjct: 300 EENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETAL 342
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 127/285 (44%), Gaps = 24/285 (8%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKTPE---DAEVFFKKMRE 231
+N LL LC+ + AR++ +K PN TFNIL+S + + + V +K
Sbjct: 220 YNTLLHALCKNGKVGRARSLMSEMKE---PNDVTFNILISAYCNEQKLIQSMVLLEKCFS 276
Query: 232 MGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDK 291
+G PDVVT +++V C + +A +VL+ + + DV+ +++ G +G+
Sbjct: 277 LGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRV 336
Query: 292 ARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFR 351
A+ EM+ G P+V YN I +C L A D ++M + + N T+N R
Sbjct: 337 AQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIR 396
Query: 352 IFYWSNDLQSSWNMYHRMMGL----GCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEK 407
+ M G + +C +I F K+ + E AL+ M EK
Sbjct: 397 GLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNC--VIYGFYKENRWEDALEFLLKM-EK 453
Query: 408 GFG-----SYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPS 447
F S+ L+S LC+ G + + + + +MI +G PS
Sbjct: 454 LFPRAVDRSFKLIS------LCEKGGMDDLKTAYDQMIGEGGVPS 492
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/377 (20%), Positives = 153/377 (40%), Gaps = 45/377 (11%)
Query: 68 DQVLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEA 127
D + R+ + S LE +R+ GF H+ + + + L R F+ ++ LL E
Sbjct: 43 DDHIVRLILDQKSASGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEM 102
Query: 128 RWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKS 187
D + P D F ++R + +
Sbjct: 103 --PDSIGLPP---------------------------------DDAIFVTIIRGFGRARL 127
Query: 188 MTDARNVYHSL-KHQFRPNLQTFNILLSGWKTPEDAEV----FFKKMREMGVTPDVVTYN 242
+ +V + K +P+L+ FN +L ED ++ F +KM G+ DV TY
Sbjct: 128 IKRVISVVDLVSKFGIKPSLKVFNSILDVL-VKEDIDIAREFFTRKMMASGIHGDVYTYG 186
Query: 243 SLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEY 302
L+ + +K+L M+ ++P+ + Y +++ L G+ +AR ++ EMKE
Sbjct: 187 ILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE- 245
Query: 303 GCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSS 362
P+ +N I +C ++L ++ L+++ S G P+ T + + +
Sbjct: 246 ---PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEA 302
Query: 363 WNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDL 422
+ R+ G + +C L++ + K+ +A + + +M KG+ ++L
Sbjct: 303 LEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAG 362
Query: 423 LCDMGKLGEAEKCFLEM 439
CD+G L A F +M
Sbjct: 363 YCDVGMLDSALDTFNDM 379
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 131/322 (40%), Gaps = 45/322 (13%)
Query: 166 LVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQF-RPNLQTFNILLSGWKTPED--- 221
VPD T ++ LC E +++A V ++ + + ++ N L+ G+
Sbjct: 279 FVPDVVT--VTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRV 336
Query: 222 AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIG 281
A+ FF +M G P+V TYN L+ YC L+ A ++M+ + + T+ ++I
Sbjct: 337 AQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIR 396
Query: 282 GLGLVGQPDKARDVLKEMKE----YGCYPDVPAYNAAIRNFCIAKRLREAYDLV------ 331
GL + G+ D +L+ M++ +G D YN I F R +A + +
Sbjct: 397 GLSIGGRTDDGLKILEMMQDSDTVHGARID--PYNCVIYGFYKENRWEDALEFLLKMEKL 454
Query: 332 ---------------------------DEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWN 364
D+M +G P+ + + ++ S
Sbjct: 455 FPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLE 514
Query: 365 MYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLC 424
+ + M+ G P + + +I F KQ+KV ++ DM E+G T + L + LC
Sbjct: 515 LINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELC 574
Query: 425 DMGKLGEAEKCFLEMIEKGQKP 446
G + +A F M+EK P
Sbjct: 575 VKGDIQKAWLLFSRMVEKSIVP 596
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/313 (19%), Positives = 124/313 (39%), Gaps = 42/313 (13%)
Query: 134 LITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARN 193
++T VM VL +V + +E R + D N L++ C M A+
Sbjct: 283 VVTVTKVMEVLCNEGRV---SEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQR 339
Query: 194 VYHSLKHQ-FRPNLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYC 249
+ ++ + + PN++T+N+L++G+ + A F M+ + + T+N+L+
Sbjct: 340 FFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLS 399
Query: 250 KGRELEKAYKVLDEMRERDL--SPDVITYTSIIGG------------------------- 282
G + K+L+ M++ D + Y +I G
Sbjct: 400 IGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAV 459
Query: 283 --------LGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEM 334
L G D + +M G P + + I + ++ E+ +L+++M
Sbjct: 460 DRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDM 519
Query: 335 TSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKV 394
++G P ++T+N F + + + M GC P+T+S L+ + +
Sbjct: 520 VTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDI 579
Query: 395 EMALQLWGDMVEK 407
+ A L+ MVEK
Sbjct: 580 QKAWLLFSRMVEK 592
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 99/220 (45%), Gaps = 6/220 (2%)
Query: 232 MGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDK 291
+G+ PD + +++ + + R +++ V+D + + + P + + SI+ L + D
Sbjct: 106 IGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVL-VKEDIDI 164
Query: 292 ARDVL-KEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
AR+ ++M G + DV Y ++ + R+ + + L+ M + G+ PNA YN
Sbjct: 165 AREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLL 224
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG 410
+ + + ++ M PN + LI + ++K+ ++ L GF
Sbjct: 225 HALCKNGKVGRARSLMSEMK----EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFV 280
Query: 411 SYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVS 450
+ + ++LC+ G++ EA + + KG K V+
Sbjct: 281 PDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVA 320
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 103/246 (41%), Gaps = 32/246 (13%)
Query: 240 TYNSLVDVYCKGRELEKAYKVLDEMRER-DLSPDVITYTSIIGGLGLVGQPDKARDVLKE 298
TY +L C R + Y++LDEM + L PD + +II G G + V+
Sbjct: 78 TYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDL 137
Query: 299 MKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDE-----MTSKGLNPNATTYNLFFRIF 353
+ ++G P + +N+ + ++E D+ E M + G++ + TY + +
Sbjct: 138 VSKFGIKPSLKVFNSILDVL-----VKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGL 192
Query: 354 YWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYT 413
+N + + + M G PN L+ K KV A L +M E
Sbjct: 193 SLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEP------ 246
Query: 414 LVSDVLFDLL----CDMGKLGEA----EKCFLEMIEKGQKPSNVSFRRI-KVLMELANRH 464
+DV F++L C+ KL ++ EKCF G P V+ ++ +VL
Sbjct: 247 --NDVTFNILISAYCNEQKLIQSMVLLEKCF----SLGFVPDVVTVTKVMEVLCNEGRVS 300
Query: 465 EALQNL 470
EAL+ L
Sbjct: 301 EALEVL 306
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 67/131 (51%), Gaps = 6/131 (4%)
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
+D + + +M G P ++ + L+ Y + ++E++ +++++M R P T+ ++
Sbjct: 475 DDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAV 534
Query: 280 IGGLGLVGQPDKARDVLK---EMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTS 336
I G + DK + +K +M E GC PD +YN + C+ +++A+ L M
Sbjct: 535 IIGFC---KQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVE 591
Query: 337 KGLNPNATTYN 347
K + P+ + ++
Sbjct: 592 KSIVPDPSMWS 602
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 79/172 (45%), Gaps = 8/172 (4%)
Query: 156 TVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFR-PNLQTFNILLS 214
+EF + +KL P F L +LC++ M D + Y + + P++ + L+
Sbjct: 444 ALEFLLKMEKLFPRAVDRSFK--LISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIH 501
Query: 215 GWKTPEDAEVFFKKMREM---GVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSP 271
+ E + + +M G P T+N+++ +CK ++ K +++M ER P
Sbjct: 502 RYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVP 561
Query: 272 DVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKR 323
D +Y ++ L + G KA + M E PD +++ + FC++++
Sbjct: 562 DTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLM--FCLSQK 611
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 91/177 (51%), Gaps = 5/177 (2%)
Query: 204 PNLQTFNILLSGW----KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYK 259
P++ +++L+ +T E A++ F +M G+ P V TYNS++D +CK E+++
Sbjct: 612 PDVIAYHVLIKALCKACRTME-ADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLS 670
Query: 260 VLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFC 319
+ M E + +PDVITYTS+I GL G+P +A EMK CYP+ + A I+ C
Sbjct: 671 CIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLC 730
Query: 320 IAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHP 376
EA EM K + P++ Y F S ++ + + ++ M+ G P
Sbjct: 731 KCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFP 787
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 102/484 (21%), Positives = 194/484 (40%), Gaps = 74/484 (15%)
Query: 60 VFLSNELIDQVLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNH 119
+ LS EL +V++ V F+ + +++G+ + ++ + M IL R+R
Sbjct: 65 LILSPELNTKVVETVLNGFKRWGLAYLFFNWASKQEGYRNDMYAYNAMASILSRARQNAS 124
Query: 120 IWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKL---VPDFDTNCFN 176
+ L+++ + ++P + V + F R +++ VP+ T +N
Sbjct: 125 LKALVVDV-LNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYT--YN 181
Query: 177 ALLRTLCQEKS----MTDAR------NVYHSLKHQFRPNLQTFNILLSGWKTPEDAEVFF 226
LL + + S + +AR +H K P LQ + E A F
Sbjct: 182 CLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVY----CNTGKSERALSVF 237
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
++ G + ++ LV +CK +++KA+++++ + ERD+ + TY +I G
Sbjct: 238 NEILSRGWLDEHIS-TILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKE 296
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATT- 345
+ DKA + ++M+ G D+ Y+ I C K L A L E+ G+ P+
Sbjct: 297 SRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGIL 356
Query: 346 --------------------------------YNLFFRIFYWSNDLQSSWNMYHRMMG-- 371
Y F F ++ + +++ +MG
Sbjct: 357 GKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNY 416
Query: 372 -----------LGCH-----PNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLV 415
L H P++ S +I K KV+MA+ L D+V+ G ++
Sbjct: 417 ESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMM 476
Query: 416 SDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI-KVLMELANRHEALQNLTQKM 474
+ + + +C G+ E+ K EM + G +PS + I L E + AL +L +KM
Sbjct: 477 YNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGAL-DLLKKM 535
Query: 475 AVFG 478
+G
Sbjct: 536 RFYG 539
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 125/314 (39%), Gaps = 5/314 (1%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKTPED---AEVFFKKMR 230
+N ++ +C+E ++ + +K P+ T N + D A KKMR
Sbjct: 477 YNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMR 536
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
G P + LV C+ A K LD++ ++ T+ I GL D
Sbjct: 537 FYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVD 596
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
+ ++ +++ G PDV AY+ I+ C A R EA L +EM SKGL P TYN
Sbjct: 597 RGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMI 656
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG 410
+ ++ + RM +P+ + LI + A+ W +M K
Sbjct: 657 DGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCY 716
Query: 411 SYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEALQNL 470
+ L LC G GEA F EM EK +P + + + + A +
Sbjct: 717 PNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGI 776
Query: 471 TQKMAVFGR-PVQV 483
++M GR PV V
Sbjct: 777 FREMVHKGRFPVSV 790
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 6/206 (2%)
Query: 152 SVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFN 210
V + +E FR D ++ L++ LC+ +A +++ + + +P + T+N
Sbjct: 594 GVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYN 653
Query: 211 ILLSGWKTPEDAEVFFK---KMREMGVTPDVVTYNSLVDVYC-KGRELEKAYKVLDEMRE 266
++ GW + + +M E PDV+TY SL+ C GR E ++ +EM+
Sbjct: 654 SMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFR-WNEMKG 712
Query: 267 RDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLRE 326
+D P+ IT+ ++I GL G +A +EM+E PD Y + + +F ++ +
Sbjct: 713 KDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINA 772
Query: 327 AYDLVDEMTSKGLNPNATTYNLFFRI 352
+ + EM KG P + N +
Sbjct: 773 GFGIFREMVHKGRFPVSVDRNYMLAV 798
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 91/468 (19%), Positives = 172/468 (36%), Gaps = 88/468 (18%)
Query: 63 SNELIDQVLKRVR-----FSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMF 117
S EL++ LK +R F + L+ Y TG+ + +L IL R +
Sbjct: 194 SVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGK------SERALSVFNEILSRGWLD 247
Query: 118 NHIWDLLIEA--RWK--DQTL------------ITPRTVMVVLARTAKVCSVRQTVEFFR 161
HI +L+ + +W D+ + +T V++ K + + + F
Sbjct: 248 EHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFE 307
Query: 162 RFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKTPE 220
+ +++ + D ++ L+ LC+ K + A ++Y +K P+ LL +
Sbjct: 308 KMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEES 367
Query: 221 D----AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEM------------ 264
+ EV + + V ++ Y SL + + + + +AY + +
Sbjct: 368 ELSRITEVIIGDIDKKSV---MLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEI 424
Query: 265 ------RERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNF 318
+ + PD + + +I L + D A +L ++ + G P YN I
Sbjct: 425 VKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGM 484
Query: 319 CIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNT 378
C R E+ L+ EM G+ P+ T N + D + ++ +M G P
Sbjct: 485 CKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWI 544
Query: 379 QSCMFLIRL-----------------------------------FKKQEKVEMALQLWGD 403
+ FL++ K E V+ L+L+ D
Sbjct: 545 KHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRD 604
Query: 404 MVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+ G + VL LC + EA+ F EM+ KG KP+ ++
Sbjct: 605 ICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATY 652
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 149/315 (47%), Gaps = 15/315 (4%)
Query: 128 RWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKS 187
R++ + RTV ++A ++ V + +E ++++ D F A + +L +
Sbjct: 69 RFRTNIAVYDRTVRRLVA-AKRLHYVEEILEEQKKYR----DMSKEGFAARIISLYGKAG 123
Query: 188 M-TDARNVYHSLKHQ-FRPNLQTFNILLSGWKTPED----AEVFFKKMREMGVTPDVVTY 241
M +A+ V+ + ++ + ++ +FN LLS ++ + E+F + ++ + PD+V+Y
Sbjct: 124 MFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSY 183
Query: 242 NSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKE 301
N+L+ C+ L +A +LDE+ + L PD++T+ +++ L GQ + ++ +M E
Sbjct: 184 NTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVE 243
Query: 302 YGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQS 361
D+ YNA + + +E +L E+ + GL P+ ++N R +
Sbjct: 244 KNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDE 303
Query: 362 SWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGF--GSYTLVSDVL 419
+ Y ++ G P+ + L+ K E A++L+ + K + G TL L
Sbjct: 304 AEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTL--QQL 361
Query: 420 FDLLCDMGKLGEAEK 434
D L K EAE+
Sbjct: 362 VDELVKGSKREEAEE 376
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 95/235 (40%), Gaps = 36/235 (15%)
Query: 244 LVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMK-EY 302
++ +Y K E A KV +EM RD V+++ +++ L + D ++ E+ +
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKL 174
Query: 303 GCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF------------ 350
PD+ +YN I+ C L EA L+DE+ +KGL P+ T+N
Sbjct: 175 SIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELG 234
Query: 351 ---------------------RIFYWSNDLQSSW--NMYHRMMGLGCHPNTQSCMFLIRL 387
R+ +N+ +S N++ + G P+ S +IR
Sbjct: 235 EEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRG 294
Query: 388 FKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEK 442
+ K++ A + ++V+ G+ +L +C G A + F E K
Sbjct: 295 SINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSK 349
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 150/359 (41%), Gaps = 23/359 (6%)
Query: 68 DQVLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEA 127
D +L+ + S L F + F HT ++ + GR + F + +++
Sbjct: 110 DLILQTLNLSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGMLEII--- 166
Query: 128 RWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDF----DTNCFNALLRTLC 183
K + + +T+ + R + +Q +FF +K+ D+ D +++ LC
Sbjct: 167 -SKYKGIAGGKTLESAIDRLVRAGRPKQVTDFF---EKMENDYGLKRDKESLTLVVKKLC 222
Query: 184 QEKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKTPE---DAEVFFKKMREMGVTPDVVT 240
++ + A + + ++ P+ ++L+SGW E +A +M G
Sbjct: 223 EKGHASIAEKMVKNTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKA 282
Query: 241 YNSLVDVYCKGRELEKAYK-------VLDEMRERDLSPDVITYTSIIGGLGLVGQPDKAR 293
YN ++D CK + +K VL EM R + + T+ +I L + + ++A
Sbjct: 283 YNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAM 342
Query: 294 DVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNP--NATTYNLFFR 351
+ M E+GC PD Y IR+ A R+ E +++D+M S G N Y F +
Sbjct: 343 TLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLK 402
Query: 352 IFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG 410
I L+ + +++ M GC P ++ L+ ++ A L+ + +KG
Sbjct: 403 ILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIA 461
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 109/279 (39%), Gaps = 11/279 (3%)
Query: 219 PEDAEVFFKKMR-EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYT 277
P+ FF+KM + G+ D + +V C+ A K++ ++ PD
Sbjct: 191 PKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKNT-ANEIFPDENICD 249
Query: 278 SIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDE---- 333
+I G + + D+A + EM G AYN + C R ++ + L E
Sbjct: 250 LLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKV 309
Query: 334 ---MTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKK 390
M +G+ N T+N+ + + ++ RM GC P+ ++ + LIR +
Sbjct: 310 LLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQ 369
Query: 391 QEKVEMALQLWGDMVEKGFGSYTLVSDV--LFDLLCDMGKLGEAEKCFLEMIEKGQKPSN 448
++ ++ M G+G + +LC + +L A F M G KP
Sbjct: 370 AARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGI 429
Query: 449 VSFRRIKVLMELANRHEALQNLTQKMAVFGRPVQVRESR 487
++ + M N+ L ++ A G V +E R
Sbjct: 430 KTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEYR 468
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 1/200 (0%)
Query: 211 ILLSGWKTPEDAEVFFKKMRE-MGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDL 269
+ L+ PE A + + E M + +V+ YN + V+ K ++LEK+ K+ DEM ER +
Sbjct: 147 VTLNNMTNPETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGI 206
Query: 270 SPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYD 329
PD T+T+II G P +A + ++M +GC PD A I + A + A
Sbjct: 207 KPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALS 266
Query: 330 LVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFK 389
L D ++ +A T++ RI+ S + N+Y M LG PN LI
Sbjct: 267 LYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMG 326
Query: 390 KQEKVEMALQLWGDMVEKGF 409
+ ++ A ++ D++ GF
Sbjct: 327 RAKRPWQAKIIYKDLITNGF 346
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 130/292 (44%), Gaps = 9/292 (3%)
Query: 163 FKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHS-LKHQFRPNLQTFNILLSGWK---T 218
+ + P + +N ++ + K + + ++ L+ +P+ TF ++S +
Sbjct: 166 LETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGV 225
Query: 219 PEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTS 278
P+ A +F+KM G PD VT +++D Y + ++ A + D R D +T+++
Sbjct: 226 PKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFST 285
Query: 279 IIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKG 338
+I G+ G D ++ +EMK G P++ YN I + AKR +A + ++ + G
Sbjct: 286 LIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNG 345
Query: 339 LNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMAL 398
PN +TY R + + + +Y M G L+ + V+ A
Sbjct: 346 FTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAF 405
Query: 399 QLWGDMVEKGF---GSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPS 447
+++ DM S+T S L + G++ EAE L+M E G +P+
Sbjct: 406 EIFQDMKNCETCDPDSWTFSS--LITVYACSGRVSEAEAALLQMREAGFEPT 455
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 90/173 (52%), Gaps = 5/173 (2%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGW---KTPEDAEVFFKKMR 230
+N L+ ++ + K A+ +Y L + F PN T+ L+ + + +DA +++M+
Sbjct: 318 YNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMK 377
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRE-RDLSPDVITYTSIIGGLGLVGQP 289
E G++ V+ YN+L+ + R +++A+++ +M+ PD T++S+I G+
Sbjct: 378 EKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRV 437
Query: 290 DKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPN 342
+A L +M+E G P + + I+ + AK++ + D++ G+ P+
Sbjct: 438 SEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPD 490
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 106/473 (22%), Positives = 193/473 (40%), Gaps = 83/473 (17%)
Query: 50 NLRQ----SLKSSGVFLSNELIDQVLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLD 105
NLRQ +L L+N LI +VL+ R ++P LEFY + R + +
Sbjct: 39 NLRQRRWNTLHQFSSSLTNPLISRVLREFR---SSPKLALEFYNWVLRSNTVAKSENRFE 95
Query: 106 T---MLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCS---------- 152
M+++L SR F+ ++ + ++P V+ L R+ + C
Sbjct: 96 ASCVMIHLLVGSRRFDDALSIMANLMSVEGEKLSPLHVLSGLIRSYQACGSSPDVFDSLV 155
Query: 153 ---------------VRQT---------------------VEFFRRFKKLVPDFDT---- 172
+ QT V RF K+ + D+
Sbjct: 156 RACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYV 215
Query: 173 ---NCFNALLRTLCQEKSMTDARNV-YHSLKHQFRPNLQTFNILLSGWKTPEDAEVFFKK 228
N FN ++ + C+E + +A +V Y LK PN+ +FN+++ G D +
Sbjct: 216 ENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQL 275
Query: 229 MREMG------VTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGG 282
+ +MG V+P+ VTYNS+++ +CK L+ A ++ +M + + + TY +++
Sbjct: 276 LGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDA 335
Query: 283 LGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPN 342
G G D+A + EM G + YN+ + + + A ++ +M SK + +
Sbjct: 336 YGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQID 395
Query: 343 ATTYNLFFRIFYWSNDLQSSWNMYHRMM------GLGCHPNTQSCMFLIRLFKKQEKVEM 396
T + R + ++ + ++ + CH NT L+ F + +K+
Sbjct: 396 RFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCH-NT-----LMHHFVRDKKLAC 449
Query: 397 ALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNV 449
A Q+ G M+ +G + L D GKL A + + MI K K SN+
Sbjct: 450 ADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMI-KMNKTSNL 501
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 123/287 (42%), Gaps = 21/287 (7%)
Query: 233 GVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKA 292
G +PDV ++SLV + + + AY+V+++ R V + +G L V + D+
Sbjct: 145 GSSPDV--FDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRF 202
Query: 293 RDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRI 352
V KEM G +V +N I +FC +L EA + M G+ PN ++N+
Sbjct: 203 WKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDG 262
Query: 353 FYWSNDLQSSWNMYHR---MMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGF 409
+ D++ + + + M G PN + +I F K ++++A ++ GDMV+ G
Sbjct: 263 ACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGV 322
Query: 410 GSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI--------------K 455
L D G EA + EM KG + V + I
Sbjct: 323 DCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMS 382
Query: 456 VLMELANRHEALQNLTQKMAVFG--RPVQVRESRPVQVHESRESAID 500
VL ++ +++ + TQ + V G R V+E+ Q S + ++
Sbjct: 383 VLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVE 429
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 4/180 (2%)
Query: 170 FDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTPEDAEVFFKK 228
D F L+ +E + A +Y + K NL +N +++G A
Sbjct: 464 LDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAV 523
Query: 229 MREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERD--LSPDVITYTSIIGGLGLV 286
+ M + D+VTYN+L++ K +E+A +L +M+++D S ++T+ +I L
Sbjct: 524 VNAMEI-KDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKF 582
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
G +KA++VLK M E G PD Y I +F + + +L D + +G+ P+ Y
Sbjct: 583 GSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIY 642
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 108/260 (41%), Gaps = 41/260 (15%)
Query: 153 VRQTVEFFRRF--KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFN 210
V++ VEF R+ KKLV D C N L+ ++K + A + S+ Q
Sbjct: 412 VKEAVEFQRQISEKKLVEDIV--CHNTLMHHFVRDKKLACADQILGSMLVQ--------- 460
Query: 211 ILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLS 270
G++ D +++ +L+D Y K +LE+A ++ D M + + +
Sbjct: 461 ----------------------GLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKT 498
Query: 271 PDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDL 330
+++ Y SI+ GL G A V+ M+ D+ YN + + EA D+
Sbjct: 499 SNLVIYNSIVNGLSKRGMAGAAEAVVNAME----IKDIVTYNTLLNESLKTGNVEEADDI 554
Query: 331 VDEMTSKGLNPNAT--TYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLF 388
+ +M + + + T+N+ + + + M+ G P++ + LI F
Sbjct: 555 LSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSF 614
Query: 389 KKQEKVEMALQLWGDMVEKG 408
K E ++L ++ +G
Sbjct: 615 SKHRSQEKVVELHDYLILQG 634
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 120/259 (46%), Gaps = 7/259 (2%)
Query: 199 KHQFRPNLQTFNIL---LSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELE 255
+H + P +T+ L L K P+ A + F+ M G+ P + Y SL+ VY K L+
Sbjct: 137 QHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLD 196
Query: 256 KAYKVLDEMRE-RDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAA 314
KA+ L+ M+ D PDV T+T +I +G+ D + ++ EM G YN
Sbjct: 197 KAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTI 256
Query: 315 IRNFCIAKRLREAYDLVDEMTSKGLN-PNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLG 373
I + A E ++ +M G + P+ T N + +++ + Y R +G
Sbjct: 257 IDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMG 316
Query: 374 CHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVS-DVLFDLLCDMGKLGEA 432
P+ + LI F K + + D +EK F S T V+ +++ + G++ +
Sbjct: 317 VQPDITTFNILILSFGKAGMYKKMCSVM-DFMEKRFFSLTTVTYNIVIETFGKAGRIEKM 375
Query: 433 EKCFLEMIEKGQKPSNVSF 451
+ F +M +G KP+++++
Sbjct: 376 DDVFRKMKYQGVKPNSITY 394
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 94/210 (44%), Gaps = 3/210 (1%)
Query: 204 PNLQTFNILLSGWKTPEDA---EVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKV 260
P++ T N ++ + + E ++ + + MGV PD+ T+N L+ + K +K V
Sbjct: 284 PDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSV 343
Query: 261 LDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCI 320
+D M +R S +TY +I G G+ +K DV ++MK G P+ Y + + +
Sbjct: 344 MDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSK 403
Query: 321 AKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQS 380
A + + ++ ++ + + + +N + + DL + +Y +M C P+ +
Sbjct: 404 AGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKIT 463
Query: 381 CMFLIRLFKKQEKVEMALQLWGDMVEKGFG 410
+I+ + + +L M+ G
Sbjct: 464 FATMIKTYTAHGIFDAVQELEKQMISSDIG 493
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 106/249 (42%), Gaps = 4/249 (1%)
Query: 96 GFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQ 155
G + + +T++ G++ MF + +L + +L T+ ++ ++R+
Sbjct: 245 GVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRK 304
Query: 156 TVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQF-RPNLQTFNILLS 214
++ RF+ + D FN L+ + + +V ++ +F T+NI++
Sbjct: 305 MESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIE 364
Query: 215 GWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSP 271
+ E + F+KM+ GV P+ +TY SLV+ Y K + K VL ++ D+
Sbjct: 365 TFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVL 424
Query: 272 DVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLV 331
D + II G G +++ +M+E C PD + I+ + +L
Sbjct: 425 DTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELE 484
Query: 332 DEMTSKGLN 340
+M S +
Sbjct: 485 KQMISSDIG 493
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 130/283 (45%), Gaps = 10/283 (3%)
Query: 71 LKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWK 130
++++ S ++P E + Y ++ F H+ S ++ LGR R FN I D+L + R
Sbjct: 54 VQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSS 113
Query: 131 DQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKS-MT 189
L T ++ A+ + + F + + N +L L + +
Sbjct: 114 GYPL-TGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQ 172
Query: 190 DARNVYHSLK-HQFRPNLQTFNILLSGWKTPEDAEV---FFKKMREMGVTPDVVTYNSLV 245
A ++ S + H PN +++N+L+ + +D + F KM E V PDV +Y L+
Sbjct: 173 KAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILI 232
Query: 246 DVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCY 305
+C+ ++ A ++LD+M + PD ++IGGL G D+ + L+EM G
Sbjct: 233 QGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFS 288
Query: 306 PDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNL 348
P N ++ FC ++ EA D+V+ + G ++ T+ +
Sbjct: 289 PHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEM 331
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 9/161 (5%)
Query: 289 PDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKR--LREAYDLVDEMTSKGLNPNATTY 346
P+K +M E+ P P + I + ++ R L++A++L G+ PN +Y
Sbjct: 135 PEKVLSTFYKMLEFNFTPQ-PKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSY 193
Query: 347 NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE 406
NL + F ++DL ++ ++ +M+ P+ S LI+ F ++ +V A++L DM+
Sbjct: 194 NLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLN 253
Query: 407 KGFGSYTLVSD-VLFDLLCDMGKLGEAEKCFLEMIEKGQKP 446
KGF V D L LCD G E +K EMI KG P
Sbjct: 254 KGF-----VPDRTLIGGLCDQGMFDEGKKYLEEMISKGFSP 289
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 9/210 (4%)
Query: 226 FKKMREMG--VTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGL 283
K R G +T ++ TY L+ VY + + EK +M E + +P I+ L
Sbjct: 107 LAKHRSSGYPLTGEIFTY--LIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVL 164
Query: 284 -GLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPN 342
G KA ++ K + +G P+ +YN ++ FC+ L AY L +M + + P+
Sbjct: 165 VSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPD 224
Query: 343 ATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWG 402
+Y + + F + + + M+ G P+ LI Q + +
Sbjct: 225 VDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRT----LIGGLCDQGMFDEGKKYLE 280
Query: 403 DMVEKGFGSYTLVSDVLFDLLCDMGKLGEA 432
+M+ KGF + VS+ L C GK+ EA
Sbjct: 281 EMISKGFSPHFSVSNCLVKGFCSFGKVEEA 310
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 108/232 (46%), Gaps = 9/232 (3%)
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
ED E KKM + G+ PD++T +LV +Y K E+A + + ++ L PD Y ++
Sbjct: 401 EDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAM 460
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
I G G+P ++KEM+ Y A +R + A + M
Sbjct: 461 ILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASD 520
Query: 340 NP-NATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMA- 397
P + Y+LF + + + + + + M LG P+ + L+R +K + ++ A
Sbjct: 521 GPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKAL 580
Query: 398 ---LQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKP 446
LQL D +E G +YT VL D + ++G + EAE+ +++ + G+ P
Sbjct: 581 RLLLQLEKDGIEIGVITYT----VLVDWMANLGLIEEAEQLLVKISQLGEAP 628
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 134/292 (45%), Gaps = 11/292 (3%)
Query: 178 LLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGW---KTPEDAEVFFKKMREMG 233
L R LC + A +++ LK P+L +N +++ + K +A + K+M E G
Sbjct: 234 LSRRLC---DYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAG 290
Query: 234 VTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKAR 293
V P+ V+Y++L+ VY + + +A V EM+E + + D+ T +I G + +A
Sbjct: 291 VLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEAD 350
Query: 294 DVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIF 353
+ +++ P+V +YN +R + A+ EA L M K + N TYN +I+
Sbjct: 351 RLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIY 410
Query: 354 YWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYT 413
+ + + + N+ M G PN + +I ++ K K++ A L+ + G
Sbjct: 411 GKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQ 470
Query: 414 LVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHE 465
++ + +G +G A++ E+ + P N+ ++ A R E
Sbjct: 471 VLYQTMIVAYERVGLMGHAKRLLHEL----KLPDNIPRETAITILAKAGRTE 518
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/393 (19%), Positives = 177/393 (45%), Gaps = 15/393 (3%)
Query: 93 RRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCS 152
+R F +D +L + +++ ++ LL + +KD+ L + R ++ +L+R
Sbjct: 81 QRSAFLDHNVDMDELLASIHQTQNEKELFSLL--STYKDRQL-SIRFMVSLLSRENDWQR 137
Query: 153 VRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNI 211
+++ K P +N +LR + + K A ++ ++ + P+ T++
Sbjct: 138 SLALLDWVHEEAKYTPS--VFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYST 195
Query: 212 LLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERD 268
L++ + + A + +KM + V+ D+V Y++L+++ + + KA + ++
Sbjct: 196 LITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSG 255
Query: 269 LSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAY 328
++PD++ Y S+I G +AR ++KEM E G P+ +Y+ + + + EA
Sbjct: 256 ITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEAL 315
Query: 329 DLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLF 388
+ EM + TT N+ ++ + ++ + ++ + + PN S ++R++
Sbjct: 316 SVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVY 375
Query: 389 KKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKC---FLEMIEKGQK 445
+ E A+ L+ M K + + + + GK E EK EM +G +
Sbjct: 376 GEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIY---GKTMEHEKATNLVQEMQSRGIE 432
Query: 446 PSNVSFRRIKVLMELANRHEALQNLTQKMAVFG 478
P+ +++ I + A + + L QK+ G
Sbjct: 433 PNAITYSTIISIWGKAGKLDRAATLFQKLRSSG 465
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 96/218 (44%), Gaps = 6/218 (2%)
Query: 93 RRKGFFHTAFSLDTMLYILGRSRMFNHIWDLL--IEARWKDQTLITPRTVMVVLARTAKV 150
+RK + +TM+ I G++ +L+ +++R + IT T++ + + K+
Sbjct: 392 QRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKL 451
Query: 151 CSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFN 210
+ F++ + + D + ++ + M A+ + H LK +T
Sbjct: 452 ---DRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAI 508
Query: 211 ILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLS 270
+L+ E+A F++ E G D+ + ++++Y + + +V ++MR
Sbjct: 509 TILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYF 568
Query: 271 PDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGC-YPD 307
PD ++ G + +KA V +EM+E GC +PD
Sbjct: 569 PDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPD 606
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 75/134 (55%), Gaps = 3/134 (2%)
Query: 204 PNLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKV 260
P T+N ++ G+ +DA+ M G +PDVVT+++L++ YCK + ++ ++
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 261 LDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCI 320
EM R + + +TYT++I G VG D A+D+L EM G PD ++ + C
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 321 AKRLREAYDLVDEM 334
K LR+A+ +++++
Sbjct: 128 KKELRKAFAILEDL 141
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 62/117 (52%)
Query: 234 VTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKAR 293
+ P +TYNS++D +CK ++ A ++LD M + SPDV+T++++I G + D
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 294 DVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
++ EM G + Y I FC L A DL++EM S G+ P+ T++
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCML 122
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 2/130 (1%)
Query: 271 PDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDL 330
P ITY S+I G + D A+ +L M GC PDV ++ I +C AKR+ ++
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 331 VDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPN--TQSCMFLIRLF 388
EM +G+ N TY F DL ++ ++ + M+ G P+ T CM
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 389 KKQEKVEMAL 398
KK+ + A+
Sbjct: 128 KKELRKAFAI 137
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 75/131 (57%), Gaps = 4/131 (3%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGW---KTPEDAEVFFKKMR 230
+N+++ C++ + DA+ + S+ + P++ TF+ L++G+ K ++ F +M
Sbjct: 13 YNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 72
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
G+ + VTY +L+ +C+ +L+ A +L+EM ++PD IT+ ++ GL +
Sbjct: 73 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELR 132
Query: 291 KARDVLKEMKE 301
KA +L+++++
Sbjct: 133 KAFAILEDLQK 143
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 61/154 (39%), Gaps = 35/154 (22%)
Query: 299 MKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSND 358
M + +P YN+ I FC R+ +A ++D M SKG +P+ T++
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFST---------- 50
Query: 359 LQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDV 418
LI + K ++V+ ++++ +M +G + T+
Sbjct: 51 -------------------------LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 85
Query: 419 LFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFR 452
L C +G L A+ EMI G P ++F
Sbjct: 86 LIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFH 119
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 102/470 (21%), Positives = 193/470 (41%), Gaps = 92/470 (19%)
Query: 55 LKSSGVFLSNELIDQVLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLY-ILGR 113
+ + +F ++D ++ + +PS+ L R R G F ++ + +++Y + +
Sbjct: 88 ISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEK 147
Query: 114 SRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQ---TVEFFRRFKK---LV 167
M N I L ++ + P V A + C + + + FF LV
Sbjct: 148 GEMDNAIEVL---EMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLV 204
Query: 168 PDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGW---KTPEDAE 223
P+ T + L+ LCQ + + R++ L+ + F + ++ + G+ DA
Sbjct: 205 PNLVT--YTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDAL 262
Query: 224 VFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGL 283
+ ++M E G+ DVV+Y+ L+D K +E+A +L +M + + P++ITYT+II GL
Sbjct: 263 MQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGL 322
Query: 284 ---------------------------------GLV--GQPDKARDVLKEMKEYGCYPDV 308
G+ G ++A +L +M++ G P +
Sbjct: 323 CKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSI 382
Query: 309 PAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY---------------------- 346
YN I C+A R+ EA DE+ SKG+ + TY
Sbjct: 383 LTYNTVINGLCMAGRVSEA----DEV-SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRR 437
Query: 347 -------------NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEK 393
N+ + F + +Y M + P+T + +I+ + K +
Sbjct: 438 FLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQ 497
Query: 394 VEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKG 443
+E AL+++ ++ K S + + + D LC G L A + +E+ EKG
Sbjct: 498 IEEALEMFNEL-RKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKG 546
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 4/169 (2%)
Query: 170 FDTNCFNALLRTLCQEKSMTDARNVYHSLKH-QFRPNLQTFNILLSGWKTPE---DAEVF 225
+T +N+L+ LCQ+ + +A ++ SL++ P+ T+ IL+ DAE
Sbjct: 688 LNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKL 747
Query: 226 FKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGL 285
M G+ P+++ YNS+VD YCK + E A +V+ ++PD T +S+I G
Sbjct: 748 LDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCK 807
Query: 286 VGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEM 334
G ++A V E K+ D + I+ FC R+ EA L+ EM
Sbjct: 808 KGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREM 856
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 113/271 (41%), Gaps = 6/271 (2%)
Query: 104 LDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRF 163
L+ + +L + F ++ + R K T+ P T++ L + S+ +
Sbjct: 589 LNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLR--SLDAYLLVVNAG 646
Query: 164 KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGW---KTP 219
+ + D + ++ LC+E + A N+ K + N T+N L++G
Sbjct: 647 ETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCL 706
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
+A F + +G+ P VTY L+D CK A K+LD M + L P++I Y SI
Sbjct: 707 VEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSI 766
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
+ G +GQ + A V+ PD ++ I+ +C + EA + E K +
Sbjct: 767 VDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNI 826
Query: 340 NPNATTYNLFFRIFYWSNDLQSSWNMYHRMM 370
+ + + + F ++ + + M+
Sbjct: 827 SADFFGFLFLIKGFCTKGRMEEARGLLREML 857
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 150/377 (39%), Gaps = 44/377 (11%)
Query: 139 TVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL 198
T +L KV ++ +E RRF + D N LL+ + +A +Y ++
Sbjct: 414 TYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAM 473
Query: 199 -KHQFRPNLQTFNILLSGW-KTP--EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGREL 254
+ P+ T+ ++ G+ KT E+A F ++R+ V+ V YN ++D CK L
Sbjct: 474 PEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKKGML 532
Query: 255 EKAYKVLDEMRERDLSPDVITYTSII----------GGLGLV------------------ 286
+ A +VL E+ E+ L D+ T +++ G LGLV
Sbjct: 533 DTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDA 592
Query: 287 -------GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
G + A +V M+ G P+ ++ R +AY LV L
Sbjct: 593 ILLLCKRGSFEAAIEVYMIMRRKGLTVTFPS--TILKTLVDNLRSLDAYLLVVNAGETTL 650
Query: 340 NP-NATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMAL 398
+ + Y + L + N+ G NT + LI +Q + AL
Sbjct: 651 SSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEAL 710
Query: 399 QLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI-KVL 457
+L+ + G + +L D LC G +AEK M+ KG P+ + + I
Sbjct: 711 RLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGY 770
Query: 458 MELANRHEALQNLTQKM 474
+L +A++ +++KM
Sbjct: 771 CKLGQTEDAMRVVSRKM 787
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/408 (21%), Positives = 167/408 (40%), Gaps = 46/408 (11%)
Query: 80 NPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEA-------RWKDQ 132
NP +L F+ +T R H S T+++IL RSR+ +H +++ A +D+
Sbjct: 84 NPHLSLRFFLFTRRYSLCSHDTHSCSTLIHILSRSRLKSHASEIIRLALRLAATDEDEDR 143
Query: 133 TLITPRTVMVVLARTA----------KVC----SVRQTVEFFRRFKKLVPDFDTNCFNAL 178
L R+++ R K C + V R+ + + + NAL
Sbjct: 144 VLKVFRSLIKSYNRCGSAPFVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNAL 203
Query: 179 LRTLCQEKSMTDARNVYHS--------------LKHQFRPNLQTFNILLSGWKTPEDAEV 224
+ + + + ++ +Y + + +PN TFN ++ + + E+
Sbjct: 204 ITEVSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEM 263
Query: 225 FFKKMREM----GVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSII 280
+ REM G +P+V +YN L++ YC + +A KV +EM+ R + D++ Y ++I
Sbjct: 264 VERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMI 323
Query: 281 GGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLN 340
GGL + KA+++ ++M G Y + +C A + + EM KG
Sbjct: 324 GGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFE 383
Query: 341 PNATTYNLFFRIFYWSND----LQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEM 396
+ T D ++++ + + +P+ L++ + K++
Sbjct: 384 ADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDR 443
Query: 397 ALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQ 444
AL + +MV KGF D G +G+ E L IE +
Sbjct: 444 ALNIQAEMVGKGFKPSQETYRAFID---GYGIVGDEETSALLAIEMAE 488
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 148/319 (46%), Gaps = 18/319 (5%)
Query: 96 GFFHTAFSLDTMLY---ILGRSRMFNHIWDLLIEARWKDQTLITP--RTVMVVLARTAKV 150
G T + +T++ I G+ + + DL++E D + P RT V++ K
Sbjct: 145 GLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVD---VGPNIRTFNVLVQAWCKK 201
Query: 151 CSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHS---LKHQFRPNLQ 207
V + E ++ ++ DT +N + Q+ A + +K + +PN +
Sbjct: 202 KKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGR 261
Query: 208 TFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEM 264
T I++ G+ D F ++M+EM V ++V +NSL++ + + + + +VL M
Sbjct: 262 TCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLM 321
Query: 265 RERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRL 324
+E ++ DVITY++++ G +KA V KEM + G PD AY+ + + AK
Sbjct: 322 KECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEP 381
Query: 325 REAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNT---QSC 381
++A +L++ + + PN + + + + + ++++M G PN ++
Sbjct: 382 KKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETL 440
Query: 382 MFLIRLFKKQEKVEMALQL 400
M+ K+ K E LQ+
Sbjct: 441 MWGYLEVKQPWKAEEVLQM 459
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/347 (19%), Positives = 152/347 (43%), Gaps = 44/347 (12%)
Query: 178 LLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGW---KTPEDAEVFFKKMREMG 233
L+ L + +A+ V+ +L RP+L ++ LL+ K ++ + G
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 234 VTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKAR 293
D + +N++++ + + +E A + L +M+E L+P TY ++I G G+ G+P+++
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 294 DVLKEMKEYG---CYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
++L M E G P++ +N ++ +C K++ EA+++V +M G+ P+ TYN
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIA 230
Query: 351 RIFYWSND-LQSSWNMYHRM-MGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKG 408
+ + +++ + +M M PN ++C ++ + ++ +V L+ M E
Sbjct: 231 TCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMR 290
Query: 409 FGSYTLVSDVLFDLLCDM-----------------------------------GKLGEAE 433
+ +V + L + ++ G + +A
Sbjct: 291 VEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAA 350
Query: 434 KCFLEMIEKGQKPSNVSFRRIKVLMELANRHEALQNLTQKMAVFGRP 480
+ F EM++ G KP ++ + A + + L + + V RP
Sbjct: 351 QVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRP 397
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 83/179 (46%), Gaps = 4/179 (2%)
Query: 203 RPNLQTFNILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLD 262
R + N+L+ + P +A+ FK + E G P +++Y +L+ ++ ++
Sbjct: 46 RSRTKLMNVLIERGR-PHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 263 EMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAK 322
E+ + D I + ++I G + A L +MKE G P YN I+ + IA
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 323 RLREAYDLVDEMTSKG---LNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNT 378
+ + +L+D M +G + PN T+N+ + + ++ +W + +M G P+T
Sbjct: 165 KPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDT 223
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 107/224 (47%), Gaps = 5/224 (2%)
Query: 130 KDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMT 189
K++ RT +V+ + VR + F RR K++ + + FN+L+ +
Sbjct: 253 KEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRD 312
Query: 190 DARNVYHSLKH-QFRPNLQTFNILLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLV 245
V +K + ++ T++ +++ W + E A FK+M + GV PD Y+ L
Sbjct: 313 GIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILA 372
Query: 246 DVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCY 305
Y + +E +KA ++L+ + + P+V+ +T++I G G D A V +M ++G
Sbjct: 373 KGYVRAKEPKKAEELLETLI-VESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVS 431
Query: 306 PDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLF 349
P++ + + + K+ +A +++ M G+ P +T+ L
Sbjct: 432 PNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLL 475
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 6/170 (3%)
Query: 134 LITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARN 193
+IT TVM + + + + F+ K D + ++ L + + K A
Sbjct: 330 VITYSTVMNAWSSAG---YMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEE 386
Query: 194 VYHSLKHQFRPNLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCK 250
+ +L + RPN+ F ++SGW + +DA F KM + GV+P++ T+ +L+ Y +
Sbjct: 387 LLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLE 446
Query: 251 GRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMK 300
++ KA +VL MR + P+ T+ + + G D++ + +K
Sbjct: 447 VKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALK 496
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 129/291 (44%), Gaps = 10/291 (3%)
Query: 168 PDFDTNCFNALLRTLCQEKSMTDARNVYHSLK-HQFRPNLQTFNIL---LSGWKTPEDAE 223
PD T+ N +L + + A + + +K + RP+ TFNI+ LS A
Sbjct: 246 PDLVTH--NIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQAL 303
Query: 224 VFFKKMRE--MGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIG 281
F MRE PDVVT+ S++ +Y E+E V + M L P++++Y +++G
Sbjct: 304 DLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMG 363
Query: 282 GLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNP 341
+ G A VL ++K+ G PDV +Y + ++ +++ +A ++ M + P
Sbjct: 364 AYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKP 423
Query: 342 NATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQS-CMFLIRLFKKQEKVEMALQL 400
N TYN + + L + ++ +M G PN S C L + ++KV + L
Sbjct: 424 NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVL 483
Query: 401 WGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+G T + + +L +A + M +K K +V+F
Sbjct: 484 SAAQ-SRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTF 533
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 134/296 (45%), Gaps = 16/296 (5%)
Query: 169 DFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGW----KTPEDAE 223
+ +T +N+ + + + A +Y S+ K + + + TF IL+SG K PE A
Sbjct: 492 NLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPE-AI 550
Query: 224 VFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGL 283
+ K+M ++ + Y+S++ Y K ++ +A + ++M+ PDVI YTS++
Sbjct: 551 SYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAY 610
Query: 284 GLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNA 343
+ KA ++ EM+ G PD A +A +R F + + L+D M K +
Sbjct: 611 NASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEI---P 667
Query: 344 TTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMF-----LIRLFKKQEKVEMAL 398
T +FF IF N LQ W ++ + P S ++ LF K KVE +
Sbjct: 668 FTGAVFFEIFSACNTLQE-WKRAIDLIQM-MDPYLPSLSIGLTNQMLHLFGKSGKVEAMM 725
Query: 399 QLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
+L+ ++ G G +L + L +G + + M G +PSN +R I
Sbjct: 726 KLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDI 781
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 125/305 (40%), Gaps = 41/305 (13%)
Query: 153 VRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHS-LKHQFRPNLQTFNI 211
V Q F +K D ++AL+ + A N+ L+ P+ T+N
Sbjct: 159 VDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNN 218
Query: 212 LLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERD 268
L++ + +A KKM + GV PD+VT+N ++ Y GR+ KA + M+
Sbjct: 219 LINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAK 278
Query: 269 LSPDVITYTSIIGGLGLVGQPDKARDVLKEMKE--YGCYPDVPAYNAAIRNFCIAKRLRE 326
+ PD T+ II L +GQ +A D+ M+E C PDV + + + + + +
Sbjct: 279 VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIEN 338
Query: 327 AYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIR 386
+ + M ++GL PN +YN + H M G
Sbjct: 339 CRAVFEAMVAEGLKPNIVSYNALMGAY-----------AVHGMSG--------------- 372
Query: 387 LFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKP 446
AL + GD+ + G + L + + G+A++ FL M ++ +KP
Sbjct: 373 ---------TALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKP 423
Query: 447 SNVSF 451
+ V++
Sbjct: 424 NVVTY 428
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 111/264 (42%), Gaps = 41/264 (15%)
Query: 166 LVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFR-PNLQTFNILLSGWKTP---ED 221
++PD + + LL + + + A+ V+ ++ + R PN+ T+N L+ + + +
Sbjct: 386 IIPDVVS--YTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAE 443
Query: 222 AEVFFKKMREMGVTPDVVT-----------------------------------YNSLVD 246
A F++M + G+ P+VV+ YNS +
Sbjct: 444 AVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIG 503
Query: 247 VYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYP 306
Y ELEKA + MR++ + D +T+T +I G + + +A LKEM++
Sbjct: 504 SYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPL 563
Query: 307 DVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMY 366
Y++ + + ++ EA + ++M G P+ Y + S + ++
Sbjct: 564 TKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELF 623
Query: 367 HRMMGLGCHPNTQSCMFLIRLFKK 390
M G P++ +C L+R F K
Sbjct: 624 LEMEANGIEPDSIACSALMRAFNK 647
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 125/294 (42%), Gaps = 11/294 (3%)
Query: 167 VPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ--FRPNLQTFNILL-----SGWKTP 219
V F F L+R L + + NV+ +K Q + +N+++ W
Sbjct: 102 VGRFARKNFPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNW--V 159
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
+ A F +M++ PD TY++L++ + + + A ++D+M ++P TY ++
Sbjct: 160 DQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNL 219
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
I G G +A +V K+M + G PD+ +N + + ++ +A + M +
Sbjct: 220 INACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKV 279
Query: 340 NPNATTYNLFFRIFYWSNDLQSSWNMYHRMMG--LGCHPNTQSCMFLIRLFKKQEKVEMA 397
P+ TT+N+ + ++++ M C P+ + ++ L+ + ++E
Sbjct: 280 RPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENC 339
Query: 398 LQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
++ MV +G + + L G G A ++ + G P VS+
Sbjct: 340 RAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSY 393
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 118/280 (42%), Gaps = 4/280 (1%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGW---KTPEDAEVFFKKMR 230
+NAL+ A +V +K P++ ++ LL+ + + P A+ F MR
Sbjct: 358 YNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMR 417
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
+ P+VVTYN+L+D Y L +A ++ +M + + P+V++ +++ +
Sbjct: 418 KERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKV 477
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
VL + G + AYN+AI ++ A L +A L M K + ++ T+ +
Sbjct: 478 NVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILI 537
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG 410
+ + + M L + ++ + KQ +V A ++ M G
Sbjct: 538 SGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCE 597
Query: 411 SYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVS 450
+ + K G+A + FLEM G +P +++
Sbjct: 598 PDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIA 637
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/261 (15%), Positives = 110/261 (42%), Gaps = 4/261 (1%)
Query: 139 TVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL 198
T ++++ + ++ + + + + + L ++++L ++ +T+A ++++ +
Sbjct: 532 TFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM 591
Query: 199 KHQ-FRPNLQTFNILLSGWKTPED---AEVFFKKMREMGVTPDVVTYNSLVDVYCKGREL 254
K P++ + +L + E A F +M G+ PD + ++L+ + KG +
Sbjct: 592 KMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQP 651
Query: 255 EKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAA 314
+ ++D MRE+++ + I + + +A D+++ M Y + N
Sbjct: 652 SNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQM 711
Query: 315 IRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGC 374
+ F + ++ L ++ + G+ N TY + + + + M G G
Sbjct: 712 LHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGI 771
Query: 375 HPNTQSCMFLIRLFKKQEKVE 395
P+ Q +I ++ +E
Sbjct: 772 QPSNQMYRDIISFGERSAGIE 792
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 97/207 (46%), Gaps = 14/207 (6%)
Query: 193 NVYHSLKHQ-------------FRPNLQTFNILLSGWKTPEDAEVFFKKMREM-GVTPDV 238
N+Y+ LK+ R + N +L + A +FF ++ G D
Sbjct: 63 NIYNILKYSNWDSAQEQLPHLGVRWDSHIINRVLKAHPPMQKAWLFFNWAAQIKGFKHDH 122
Query: 239 VTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKE 298
TY +++D++ + ++ Y V M+E+ + D +TYTS+I + G D A + +E
Sbjct: 123 FTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEE 182
Query: 299 MKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSND 358
M++ GC P V +Y A ++ R+ EA ++ EM ++PN TY + +
Sbjct: 183 MRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGK 242
Query: 359 LQSSWNMYHRMMGLGCHPNTQSCMFLI 385
+ + +++ +M +G P+ +C LI
Sbjct: 243 CEEALDIFFKMQEIGVQPDKAACNILI 269
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 127/293 (43%), Gaps = 24/293 (8%)
Query: 15 LPAPNLILSRLLSSTLNDGDVHRVMTIITTTSSPENLRQSLKSSGVFLSNELIDQVLKRV 74
LP P++ ++S+ N I S+ ++ ++ L GV + +I++VLK
Sbjct: 50 LPDPSVYTRDIVSNIYN----------ILKYSNWDSAQEQLPHLGVRWDSHIINRVLK-- 97
Query: 75 RFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTL 134
+H + F+ + + KGF H F+ TML I G + ++ + + K L
Sbjct: 98 --AHPPMQKAWLFFNWAAQIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKG-VL 154
Query: 135 ITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNV 194
I T ++ + V + + + + + A ++ L + + +A V
Sbjct: 155 IDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEV 214
Query: 195 YHS-LKHQFRPNLQTFNILL----SGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYC 249
Y L+ + PN T+ +L+ + K E ++FF KM+E+GV PD N L+
Sbjct: 215 YKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFF-KMQEIGVQPDKAACNILIAKAL 273
Query: 250 KGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEY 302
K E +VL M+E + V+ Y + L + ++ D+L+E+ +
Sbjct: 274 KFGETSFMTRVLVYMKENGV---VLRYPIFVEALETLKAAGESDDLLREVNSH 323
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 65/172 (37%)
Query: 272 DVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLV 331
D TYT+++ G G+ V MKE G D Y + I + + A L
Sbjct: 121 DHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLW 180
Query: 332 DEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQ 391
+EM G P +Y + ++ + ++ + +Y M+ PN + L+
Sbjct: 181 EEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVAT 240
Query: 392 EKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKG 443
K E AL ++ M E G ++L G+ + + M E G
Sbjct: 241 GKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENG 292
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 159/373 (42%), Gaps = 18/373 (4%)
Query: 141 MVVLARTAKVC-SVRQTVEFFRRFKK---LVPDFDTNCFNALLRTLCQEKSMTDARNVYH 196
MV + ++ K+ V + FR KK +P C+ L L Q + ++++
Sbjct: 172 MVHITQSLKIVKEVDAALSLFRWAKKQPWYLPS--DECYVVLFDGLNQGRDFVGIQSLFE 229
Query: 197 SLKHQFRPN----LQTFNILLSGWKTPEDAEVFF---KKMREMGVTPDVVTYNSLVDVYC 249
+ + +N ++ E EV F KK +E G D TYN+L+ ++
Sbjct: 230 EMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFL 289
Query: 250 KGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVP 309
KA+++ + M + D D TY II L G+ D A + ++MKE P
Sbjct: 290 NKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFS 349
Query: 310 AYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRM 369
+++ + + A RL + + EM G P+AT + + + L ++ ++ M
Sbjct: 350 VFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEM 409
Query: 370 MGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKL 429
G PN +I K K+E+A+ ++ DM + GF L ++ G++
Sbjct: 410 KKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQV 469
Query: 430 GEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRH--EALQNLTQKMAVFGRPVQVRESR 487
A K + M G +P S+ I +L LAN+ + + +M G V V S
Sbjct: 470 DSAMKIYNSMTNAGLRPGLSSY--ISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASD 527
Query: 488 PVQVHESRESAID 500
+ ++ +++++D
Sbjct: 528 VLMIY-IKDASVD 539
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 136/307 (44%), Gaps = 12/307 (3%)
Query: 154 RQTVEFFRRF--KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLK-HQFRPNLQTFN 210
R+ +E ++ + PD T+ N +L + + A + + +K + RP+ TFN
Sbjct: 98 REALEVCKKMTDNGVGPDLVTH--NIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFN 155
Query: 211 IL---LSGWKTPEDAEVFFKKMRE--MGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMR 265
I+ LS A F MRE PDVVT+ S++ +Y E+E V + M
Sbjct: 156 IIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMV 215
Query: 266 ERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLR 325
L P++++Y +++G + G A VL ++K+ G PDV +Y + ++ +++
Sbjct: 216 AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPG 275
Query: 326 EAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQS-CMFL 384
+A ++ M + PN TYN + + L + ++ +M G PN S C L
Sbjct: 276 KAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL 335
Query: 385 IRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQ 444
+ ++KV + L +G T + + +L +A + M +K
Sbjct: 336 AACSRSKKKVNVDTVLSAAQ-SRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKV 394
Query: 445 KPSNVSF 451
K +V+F
Sbjct: 395 KADSVTF 401
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 134/296 (45%), Gaps = 16/296 (5%)
Query: 169 DFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGW----KTPEDAE 223
+ +T +N+ + + + A +Y S+ K + + + TF IL+SG K PE A
Sbjct: 360 NLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPE-AI 418
Query: 224 VFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGL 283
+ K+M ++ + Y+S++ Y K ++ +A + ++M+ PDVI YTS++
Sbjct: 419 SYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAY 478
Query: 284 GLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNA 343
+ KA ++ EM+ G PD A +A +R F + + L+D M K +
Sbjct: 479 NASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEI---P 535
Query: 344 TTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMF-----LIRLFKKQEKVEMAL 398
T +FF IF N LQ W ++ + P S ++ LF K KVE +
Sbjct: 536 FTGAVFFEIFSACNTLQE-WKRAIDLIQM-MDPYLPSLSIGLTNQMLHLFGKSGKVEAMM 593
Query: 399 QLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
+L+ ++ G G +L + L +G + + M G +PSN +R I
Sbjct: 594 KLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDI 649
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 126/308 (40%), Gaps = 41/308 (13%)
Query: 153 VRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHS-LKHQFRPNLQTFNI 211
V Q F +K D ++AL+ + A N+ L+ P+ T+N
Sbjct: 27 VDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNN 86
Query: 212 LLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERD 268
L++ + +A KKM + GV PD+VT+N ++ Y GR+ KA + M+
Sbjct: 87 LINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAK 146
Query: 269 LSPDVITYTSIIGGLGLVGQPDKARDVLKEMKE--YGCYPDVPAYNAAIRNFCIAKRLRE 326
+ PD T+ II L +GQ +A D+ M+E C PDV + + + + + +
Sbjct: 147 VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIEN 206
Query: 327 AYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIR 386
+ + M ++GL PN +YN + H M G
Sbjct: 207 CRAVFEAMVAEGLKPNIVSYNALMGAY-----------AVHGMSG--------------- 240
Query: 387 LFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKP 446
AL + GD+ + G + L + + G+A++ FL M ++ +KP
Sbjct: 241 ---------TALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKP 291
Query: 447 SNVSFRRI 454
+ V++ +
Sbjct: 292 NVVTYNAL 299
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 111/264 (42%), Gaps = 41/264 (15%)
Query: 166 LVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFR-PNLQTFNILLSGWKTP---ED 221
++PD + + LL + + + A+ V+ ++ + R PN+ T+N L+ + + +
Sbjct: 254 IIPDVVS--YTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAE 311
Query: 222 AEVFFKKMREMGVTPDVVT-----------------------------------YNSLVD 246
A F++M + G+ P+VV+ YNS +
Sbjct: 312 AVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIG 371
Query: 247 VYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYP 306
Y ELEKA + MR++ + D +T+T +I G + + +A LKEM++
Sbjct: 372 SYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPL 431
Query: 307 DVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMY 366
Y++ + + ++ EA + ++M G P+ Y + S + ++
Sbjct: 432 TKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELF 491
Query: 367 HRMMGLGCHPNTQSCMFLIRLFKK 390
M G P++ +C L+R F K
Sbjct: 492 LEMEANGIEPDSIACSALMRAFNK 515
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/356 (20%), Positives = 146/356 (41%), Gaps = 11/356 (3%)
Query: 103 SLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRR 162
+ + ++Y L + + DL R K R +V + SV+ +E R
Sbjct: 153 TFNIIIYCLSKLGQSSQALDLFNSMREKRAEC---RPDVVTFTSIMHLYSVKGEIENCRA 209
Query: 163 -FKKLVPDF---DTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGW- 216
F+ +V + + +NAL+ A +V +K P++ ++ LL+ +
Sbjct: 210 VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYG 269
Query: 217 --KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVI 274
+ P A+ F MR+ P+VVTYN+L+D Y L +A ++ +M + + P+V+
Sbjct: 270 RSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVV 329
Query: 275 TYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEM 334
+ +++ + VL + G + AYN+AI ++ A L +A L M
Sbjct: 330 SVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSM 389
Query: 335 TSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKV 394
K + ++ T+ + + + + M L + ++ + KQ +V
Sbjct: 390 RKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQV 449
Query: 395 EMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVS 450
A ++ M G + + K G+A + FLEM G +P +++
Sbjct: 450 TEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIA 505
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 6/218 (2%)
Query: 241 YNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMK 300
YN ++ ++ + +++A + EM++ PD TY ++I G GQ A +++ +M
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 301 EYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQ 360
P YN I + REA ++ +MT G+ P+ T+N+ +
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 361 SSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLF 420
+ + + M G P+T + +I K + AL L+ M EK V V F
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDV--VTF 191
Query: 421 DLLCDMGKL-GEAEKC---FLEMIEKGQKPSNVSFRRI 454
+ + + GE E C F M+ +G KP+ VS+ +
Sbjct: 192 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNAL 229
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/276 (16%), Positives = 117/276 (42%), Gaps = 7/276 (2%)
Query: 139 TVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL 198
T ++++ + ++ + + + + + L ++++L ++ +T+A ++++ +
Sbjct: 400 TFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM 459
Query: 199 KHQ-FRPNLQTFNILLSGWKTPED---AEVFFKKMREMGVTPDVVTYNSLVDVYCKGREL 254
K P++ + +L + E A F +M G+ PD + ++L+ + KG +
Sbjct: 460 KMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQP 519
Query: 255 EKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAA 314
+ ++D MRE+++ + I + + +A D+++ M Y + N
Sbjct: 520 SNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQM 579
Query: 315 IRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGC 374
+ F + ++ L ++ + G+ N TY + + + + M G G
Sbjct: 580 LHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGI 639
Query: 375 HPNTQSCMFLIRLFKKQEKVE---MALQLWGDMVEK 407
P+ Q +I ++ +E + Q G+M E+
Sbjct: 640 QPSNQMYRDIISFGERSAGIEFEPLIRQKLGEMREE 675
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 145/377 (38%), Gaps = 54/377 (14%)
Query: 150 VCSVRQTVEFFRRF-----KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL---KHQ 201
+C + E RRF +PD T N ++ L +S V H L K +
Sbjct: 100 LCDAGRFDEAHRRFLLFLASGFIPDERT--CNVIIARLLYSRSPVSTLGVIHRLIGFKKE 157
Query: 202 FRPNLQTFNILLSGWKTPE---DAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAY 258
F P+L +N L++ T DA MR G PDVVT+ +L+ YC+ RELE A+
Sbjct: 158 FVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAH 217
Query: 259 KVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEY---------------- 302
KV DEMR + P+ +T + +IGG + + R ++KE+ EY
Sbjct: 218 KVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFAN 277
Query: 303 --------GCYPDV----------------PAYNAAIRNFCIAKRLREAYDLVDEMTSKG 338
G + D+ AY I + C +R A +V M SKG
Sbjct: 278 LVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKG 337
Query: 339 LNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMAL 398
L P T+YN ++ + P+ + L+ K+ A
Sbjct: 338 LKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKAR 397
Query: 399 QLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRR-IKVL 457
+ M+ K T + ++ LC M E + M++ +P + I L
Sbjct: 398 NVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGL 457
Query: 458 MELANRHEALQNLTQKM 474
++ +A++ L M
Sbjct: 458 CKMGRVDDAMKVLDDMM 474
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 99/222 (44%), Gaps = 7/222 (3%)
Query: 136 TPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVY 195
T TV+ L + +V + ++ K PD T N ++ L + +A +V
Sbjct: 449 TLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVT--LNTVMCGLLAQGRAEEALDVL 506
Query: 196 HSL--KHQFRPNLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCK 250
+ + +++ +P + +N ++ G ++A F ++ + VT D TY ++D C
Sbjct: 507 NRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCV 566
Query: 251 GRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPA 310
+++ A K D++ D Y + + GL G A L ++ + G P+V
Sbjct: 567 TNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVC 626
Query: 311 YNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRI 352
YN I + REAY +++EM G P+A T+ + ++
Sbjct: 627 YNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRILDKL 668
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 117/272 (43%), Gaps = 6/272 (2%)
Query: 175 FNALLRTLCQ-EKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKTPED---AEVFFKKMR 230
+ ++ +LC+ ++ AR VY +P ++N ++ G A ++
Sbjct: 310 YGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGS 369
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
E P TY L++ CK + KA VL+ M ++ + Y + GL ++ P
Sbjct: 370 EFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPT 429
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDE-MTSKGLNPNATTYNLF 349
+ +VL M + C PD N I C R+ +A ++D+ MT K P+A T N
Sbjct: 430 EILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTV 489
Query: 350 FRIFYWSNDLQSSWNMYHRMMGLG-CHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKG 408
+ + ++ +R+M P + +IR K K + A+ ++G + +
Sbjct: 490 MCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKAS 549
Query: 409 FGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMI 440
+ + ++ D LC K+ A+K + ++I
Sbjct: 550 VTADSTTYAIIIDGLCVTNKVDMAKKFWDDVI 581
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 8/214 (3%)
Query: 172 TNCFNALLRTLCQEKSMTDARNVYHS-LKHQFRPNLQTFNILLSGW----KTPEDAEVFF 226
T +N LR LC + T+ NV S L+ RP+ T N +++G + + +V
Sbjct: 412 TRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLD 471
Query: 227 KKMREMGVTPDVVTYNS-LVDVYCKGRELEKAYKVLDE-MRERDLSPDVITYTSIIGGLG 284
M PD VT N+ + + +GR E+A VL+ M E + P V+ Y ++I GL
Sbjct: 472 DMMTGKFCAPDAVTLNTVMCGLLAQGRA-EEALDVLNRVMPENKIKPGVVAYNAVIRGLF 530
Query: 285 LVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNAT 344
+ + D+A V ++++ D Y I C+ ++ A D++ +A
Sbjct: 531 KLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAF 590
Query: 345 TYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNT 378
Y F + S L + + + + G PN
Sbjct: 591 VYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNV 624
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 79/194 (40%), Gaps = 6/194 (3%)
Query: 217 KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITY 276
+ P++A + G PD + +S++ C ++A++ PD T
Sbjct: 69 RNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTC 128
Query: 277 TSIIGGLGLVGQPDKARDVLKEM----KEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVD 332
II L P V+ + KE+ P + YN + C R+ +A+ LV
Sbjct: 129 NVIIARLLYSRSPVSTLGVIHRLIGFKKEF--VPSLTNYNRLMNQLCTIYRVIDAHKLVF 186
Query: 333 EMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQE 392
+M ++G P+ T+ + +L+ + ++ M G PN+ + LI F K
Sbjct: 187 DMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMR 246
Query: 393 KVEMALQLWGDMVE 406
VE +L ++ E
Sbjct: 247 DVETGRKLMKELWE 260
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 146 RTAKVCSVRQTV-EFFRRFKKLV-----PDFDTNCFNALLRTLCQEKSMTDA-RNVYHSL 198
R +C+VR+ E R L PD + ++++ +LC +A R L
Sbjct: 60 RIHSICAVRRNPDEALRILDGLCLRGYRPD--SLNLSSVIHSLCDAGRFDEAHRRFLLFL 117
Query: 199 KHQFRPNLQTFNILLSGW---KTPEDAE------VFFKKMREMGVTPDVVTYNSLVDVYC 249
F P+ +T N++++ ++P + FKK P + YN L++ C
Sbjct: 118 ASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKE----FVPSLTNYNRLMNQLC 173
Query: 250 KGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVP 309
+ A+K++ +MR R PDV+T+T++IGG + + + A V EM+ G P+
Sbjct: 174 TIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSL 233
Query: 310 AYNAAIRNFCIAKRLREAYDLVDEM 334
+ I F + + L+ E+
Sbjct: 234 TLSVLIGGFLKMRDVETGRKLMKEL 258
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 106/222 (47%), Gaps = 5/222 (2%)
Query: 235 TPDVVTYNSLVDVYCKGRELEKAYKVLDEMR---ERDLSPDVITYTSIIGGLGLVGQPDK 291
PD Y +L+ Y K + ++L+ MR +R+ PD +TYT+++ G D+
Sbjct: 411 APDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDR 470
Query: 292 ARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMT-SKGLNPNATTYNLFF 350
AR VL EM G + YN ++ +C ++ A DL+ EMT G+ P+ +YN+
Sbjct: 471 ARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIII 530
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG 410
+D + ++ M G P S L++ F + ++A +++ +M+
Sbjct: 531 DGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRV 590
Query: 411 SYTLVS-DVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
L++ ++L + C +G + +A++ M E G P+ ++
Sbjct: 591 KVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATY 632
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 140/340 (41%), Gaps = 44/340 (12%)
Query: 163 FKKLVPDF----------------DTNCFNALLRTLCQEKSMTDARNVYHSLKHQ----F 202
FKKL+P+ D+ + L++ + + D + +++ Q
Sbjct: 389 FKKLLPNSVDPSGEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNS 448
Query: 203 RPNLQTFNILLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYK 259
P+ T+ ++S + + A +M MGV + +TYN L+ YCK ++++A
Sbjct: 449 HPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAED 508
Query: 260 VLDEMRE-RDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNF 318
+L EM E + PDV++Y II G L+ A EM+ G P +Y ++ F
Sbjct: 509 LLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAF 568
Query: 319 CIAKRLREAYDLVDEMTSKG-LNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPN 377
++ + + A + DEM + + + +N+ + ++ + + RM G +PN
Sbjct: 569 AMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPN 628
Query: 378 TQSCMFLIRLFKKQEKVEMALQLWGDM-----VEKGFGSYTLVSDV----------LFDL 422
+ L + K AL LW ++ V+K SD L D
Sbjct: 629 VATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDT 688
Query: 423 LCDMGKLGEAEKCFLEMI----EKGQKPSNVSFRRIKVLM 458
L D+ K LE+I E G P+ +++I V M
Sbjct: 689 LADICVRAAFFKKALEIIACMEENGIPPNKTKYKKIYVEM 728
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 128/278 (46%), Gaps = 17/278 (6%)
Query: 80 NPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPR- 138
+PS L Y++ +RK + T M+ G+++M++ I +++ + + + +
Sbjct: 74 DPSFLLPAYQHYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEF 133
Query: 139 --TVMVVLARTAKVCSVRQTVEFFRRFKKLVPDF----DTNCFNALLRTLCQEKSMTDAR 192
+M + A + + +E +PDF + FN +L L K +
Sbjct: 134 FYNLMRIYGNLAG--RINRAIEILFG----MPDFGCWPSSKSFNFILNLLVSAKLFDEIH 187
Query: 193 NVYHSL-KHQFRPNLQTFNILLSGWKTPEDAEVFFKKMREM---GVTPDVVTYNSLVDVY 248
++ S K + NIL+ G + E + + E P+V+T++ L+ +
Sbjct: 188 KIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGF 247
Query: 249 CKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDV 308
C + E+A+K+L+ M + + PD IT+ +I GL G+ ++ D+L+ MK GC P+
Sbjct: 248 CNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNP 307
Query: 309 PAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
Y + KR EA +++ +M S G+ P+ +Y
Sbjct: 308 GTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSY 345
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 107/254 (42%), Gaps = 3/254 (1%)
Query: 223 EVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGG 282
E+ F M + G P ++N ++++ + ++ +K+ + + D +I G
Sbjct: 153 EILFG-MPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKG 211
Query: 283 LGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPN 342
L G + A +L E + P+V ++ IR FC + EA+ L++ M + + P+
Sbjct: 212 LCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPD 271
Query: 343 ATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCM-FLIRLFKKQEKVEMALQLW 401
T+N+ ++ ++ RM GC PN + L L K+ +E A ++
Sbjct: 272 TITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE-AKEMM 330
Query: 402 GDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELA 461
M+ G L + LC+ + E + +M+ G P + + ++ +
Sbjct: 331 SQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCVVSK 390
Query: 462 NRHEALQNLTQKMA 475
N ++ NL + A
Sbjct: 391 NNDDSQANLDRITA 404
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 90/205 (43%), Gaps = 8/205 (3%)
Query: 254 LEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNA 313
+ +A ++L M + P ++ I+ L D+ + + G D N
Sbjct: 148 INRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNI 207
Query: 314 AIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLG 373
I+ C + L A L+DE + PN T++ R F + ++ + RM
Sbjct: 208 LIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKER 267
Query: 374 CHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGF----GSYTLVSDVLFDLLCDMGKL 429
P+T + LI +K+ +VE + L M KG G+Y +VL+ LL D +
Sbjct: 268 IEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTY---QEVLYGLL-DKKRN 323
Query: 430 GEAEKCFLEMIEKGQKPSNVSFRRI 454
EA++ +MI G +PS +S++++
Sbjct: 324 LEAKEMMSQMISWGMRPSFLSYKKM 348
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 28/204 (13%)
Query: 160 FRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKT 218
F+ ++ D DT +N ++ LC+ +A N++ +L +P++QT+N+++ + +
Sbjct: 2 FKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FSS 60
Query: 219 PEDAEVFFKKMREMGVTPDVVTYNS--------------------------LVDVYCKGR 252
AE + +M G+ PD +TYNS L++ YCK
Sbjct: 61 LGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCSTFNTLINGYCKAT 120
Query: 253 ELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYN 312
++ + EM R + +VITYT++I G VG + A D+ +EM G Y +
Sbjct: 121 RVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFR 180
Query: 313 AAIRNFCIAKRLREAYDLVDEMTS 336
+ C K LR+A ++ + +S
Sbjct: 181 DILPQLCSRKELRKAVAMLLQKSS 204
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 86/216 (39%), Gaps = 35/216 (16%)
Query: 295 VLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFY 354
+ K M+E D YN I C A + EA ++ + GL P+ TYN+ R
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRF-- 58
Query: 355 WSNDLQSSWNMYHRMMGLGCHPNT-----------------------QSCM---FLIRLF 388
+ L + +Y M+ G P+T +SC LI +
Sbjct: 59 --SSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCSTFNTLINGY 116
Query: 389 KKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSN 448
K +V+ + L+ +M +G + + L +G A F EM+ G S+
Sbjct: 117 CKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSS 176
Query: 449 VSFRRIKVLMELANRHE---ALQNLTQKMAVFGRPV 481
++FR I L +L +R E A+ L QK ++ V
Sbjct: 177 ITFRDI--LPQLCSRKELRKAVAMLLQKSSMVSNNV 210
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 116/267 (43%), Gaps = 9/267 (3%)
Query: 170 FDTNCFNALLRTLCQEKSMTDARNVY-HSLKHQ--FRPNLQTFNILLSGWKTPEDAEV-- 224
D N++L++ + D ++ H LK Q FRP TF ILLS D+ +
Sbjct: 83 LDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISN 142
Query: 225 ---FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIG 281
M G+ PD VT + V C+ +++A ++ E+ E+ PD TY ++
Sbjct: 143 VHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLK 202
Query: 282 GLGLVGQPDKARDVLKEMKE-YGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLN 340
L + + EM++ + PD+ ++ I N C +K LREA LV ++ + G
Sbjct: 203 HLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFK 262
Query: 341 PNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQL 400
P+ YN + F + + +Y +M G P+ + LI K +VE A
Sbjct: 263 PDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMY 322
Query: 401 WGDMVEKGFGSYTLVSDVLFDLLCDMG 427
MV+ G+ T L + +C G
Sbjct: 323 LKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 128/283 (45%), Gaps = 10/283 (3%)
Query: 179 LRTLCQEKSMTDARNVYHSLKHQFR-P-NLQTFNILLSGWKT---PEDAEVFFKKM--RE 231
LR + +++DA+++++S+ R P +L+ N +L + + D F+ + +
Sbjct: 56 LRNPFKSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQ 115
Query: 232 MGVTPDVVTYNSLVDVYCKGRE--LEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQP 289
P T+ L+ C+ + + ++VL+ M L PD +T + L G+
Sbjct: 116 PNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRV 175
Query: 290 DKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSK-GLNPNATTYNL 348
D+A+D++KE+ E PD YN +++ C K L Y+ VDEM + P+ ++ +
Sbjct: 176 DEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTI 235
Query: 349 FFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKG 408
S +L+ + + ++ G P+ +++ F K A+ ++ M E+G
Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG 295
Query: 409 FGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+ + L L G++ EA M++ G +P ++
Sbjct: 296 VEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATY 338
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 74/185 (40%), Gaps = 1/185 (0%)
Query: 295 VLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFY 354
VL M G PD + A+R+ C R+ EA DL+ E+T K P+ TYN +
Sbjct: 146 VLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLC 205
Query: 355 WSNDLQSSWNMYHRMMG-LGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYT 413
DL + M P+ S LI + + A+ L + GF
Sbjct: 206 KCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDC 265
Query: 414 LVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEALQNLTQK 473
+ + + C + K EA + +M E+G +P +++ + + A R E + +
Sbjct: 266 FLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKT 325
Query: 474 MAVFG 478
M G
Sbjct: 326 MVDAG 330
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 126/291 (43%), Gaps = 39/291 (13%)
Query: 225 FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYK------------------------- 259
+F++M + G+ PD VTY++++DVY K ++E+
Sbjct: 243 WFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFG 302
Query: 260 ----------VLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVP 309
VL EM+ D+ P+V+ Y +++ +G G+P AR + EM E G P+
Sbjct: 303 EAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEK 362
Query: 310 AYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRM 369
A ++ + A+ R+A L +EM +K + YN + + + +++ M
Sbjct: 363 TLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDM 422
Query: 370 M-GLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGK 428
+ C P+ S ++ ++ K E A++L+ +M++ G + L L +
Sbjct: 423 KESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKR 482
Query: 429 LGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEALQNLTQKMAVFGR 479
+ + F I++G KP + R L+ + E+ ++ + MA R
Sbjct: 483 IDDVVYVFDLSIKRGVKPDD---RLCGCLLSVMALCESSEDAEKVMACLER 530
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 96/451 (21%), Positives = 181/451 (40%), Gaps = 45/451 (9%)
Query: 28 STLNDGD----VHRVMTIITTTSSPENLRQSLKSSGVFLSNELIDQVLKRVRFSHANPSQ 83
ST GD ++ V+ I+ PE +SL S + +++E + +VL R + + +
Sbjct: 40 STPTKGDYFAAINHVVNIVRREIHPE---RSLNSLRLPVTSEFVFRVL---RATSRSSND 93
Query: 84 TLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTL-ITPRTVMV 142
+L F+ + + T+ + + L + + +W +L + KD +L I+ T+
Sbjct: 94 SLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKIL--KQMKDLSLDISGETLCF 151
Query: 143 VLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTL-CQEKSMTDARNVYHSLKHQ 201
++ + K V Q VE F N + +TL CQ+ +VY+SL H
Sbjct: 152 IIEQYGKNGHVDQAVELF---------------NGVPKTLGCQQTV-----DVYNSLLHA 191
Query: 202 FRPNLQTFNILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVL 261
L K A ++M G+ PD TY LV+ +C ++++A + L
Sbjct: 192 -----------LCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFL 240
Query: 262 DEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIA 321
DEM R +P +I GL G + A++++ +M + G PD+ +N I +
Sbjct: 241 DEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKS 300
Query: 322 KRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSC 381
+ ++ GL + TY + ++ + + + G P
Sbjct: 301 GEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLY 360
Query: 382 MFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIE 441
+I+ + + A + DM K V +L + GK +A +EM E
Sbjct: 361 APIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTE 420
Query: 442 KGQKPSNVSFRRIKVLMELANRHEALQNLTQ 472
G P + F + ++ +H+ + Q
Sbjct: 421 MGLVPISRCFDMVTDGLKNGGKHDLAMRIEQ 451
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 95/179 (53%), Gaps = 4/179 (2%)
Query: 165 KLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKTP---E 220
KL + D +N L++ LC + S T+A + ++++ +P+ TFNILL T E
Sbjct: 170 KLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFE 229
Query: 221 DAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSII 280
+ E + +M E V D+ +YN+ + + E+ + D+++ +L PDV T+T++I
Sbjct: 230 EGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMI 289
Query: 281 GGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
G G+ D+A KE+++ GC P +N+ + C A L AY+L E+ +K L
Sbjct: 290 KGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRL 348
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 4/231 (1%)
Query: 208 TFNILLSGW---KTPEDAEVFFKKM-REMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDE 263
+FN LL+ K + E FK++ ++ + PDV +YN+L+ C +A ++DE
Sbjct: 143 SFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDE 202
Query: 264 MRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKR 323
+ + L PD IT+ ++ G+ ++ + M E D+ +YNA + + +
Sbjct: 203 IENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENK 262
Query: 324 LREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMF 383
E L D++ L P+ T+ + F L + Y + GC P
Sbjct: 263 SEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNS 322
Query: 384 LIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEK 434
L+ K +E A +L ++ K V + D L K EAE+
Sbjct: 323 LLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEE 373
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 97/218 (44%), Gaps = 13/218 (5%)
Query: 244 LVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMK-EY 302
++++Y + E A KV DEM ER+ +++ +++ + D + KE+ +
Sbjct: 112 IINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKL 171
Query: 303 GCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSS 362
PDV +YN I+ C EA L+DE+ +KGL P+ T+N+ Y +
Sbjct: 172 SIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEG 231
Query: 363 WNMYHRMMGLGCHPNTQSCMFLIRLF------KKQEKVEMALQLWGDMVEKGFGSYTLVS 416
++ RM+ + +S + RL K +E V + +L G+ ++ ++T
Sbjct: 232 EQIWARMVEKNVKRDIRS--YNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFT--- 286
Query: 417 DVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
+ GKL EA + E+ + G +P F +
Sbjct: 287 -AMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSL 323
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/214 (19%), Positives = 92/214 (42%), Gaps = 1/214 (0%)
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRER-DLSPDVITYTS 278
E+A+ F +M E +++N+L++ ++ + + E+ + + PDV +Y +
Sbjct: 123 ENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNT 182
Query: 279 IIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKG 338
+I GL G +A ++ E++ G PD +N + + E + M K
Sbjct: 183 LIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKN 242
Query: 339 LNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMAL 398
+ + +YN N + +++ ++ G P+ + +I+ F + K++ A+
Sbjct: 243 VKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAI 302
Query: 399 QLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEA 432
+ ++ + G V + L +C G L A
Sbjct: 303 TWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESA 336
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSLK-HQFRPNLQTFNILLSGWKTP---EDAEVFF 226
D +NA L L E + +++ LK ++ +P++ TF ++ G+ + ++A ++
Sbjct: 246 DIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWY 305
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
K++ + G P +NSL+ CK +LE AY++ E+ + L D ++ L
Sbjct: 306 KEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKG 365
Query: 287 GQPDKARDVLK 297
+ D+A ++++
Sbjct: 366 SKQDEAEEIVE 376
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 94/180 (52%), Gaps = 5/180 (2%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKHQF-RPNLQTFNILLSGWKTPED---AEVFFKKMR 230
F+ ++ +LC+ +++ DA+ + + + P FN+++ D A+ K M
Sbjct: 375 FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLME 434
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
G+ PDV TY ++ Y KG +++A ++L E +++ +TY ++I G + + D
Sbjct: 435 SRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYD 494
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCI-AKRLREAYDLVDEMTSKGLNPNATTYNLF 349
+A +L EM +G P+ YN I++FC+ A +A L +EM KGL+ NA + L
Sbjct: 495 EALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLNAISQGLI 554
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 95/237 (40%), Gaps = 14/237 (5%)
Query: 183 CQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKTPEDAEVFFKK---------MREMG 233
C+E +A +VY K + + F L D + F + R G
Sbjct: 312 CKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITFAQEMLGDLSGEARRRG 371
Query: 234 VTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKAR 293
+ P ++ ++ C+ R ++ A +L +M + +P + ++ G D+A+
Sbjct: 372 IKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAK 427
Query: 294 DVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIF 353
+VLK M+ G PDV Y I + + EA +++ E K + TY+ R +
Sbjct: 428 EVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGY 487
Query: 354 YWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLF-KKQEKVEMALQLWGDMVEKGF 409
+ + + + M G PN LI+ F K E A L+ +M +KG
Sbjct: 488 CKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGL 544
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 108/263 (41%), Gaps = 16/263 (6%)
Query: 202 FRPNLQTFNILLSG--------WKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRE 253
F PN +T+ + L W A +KM + GV + +++ +CK +
Sbjct: 262 FTPNAKTYYLTLEALCKRSFMDW-----ACSVCEKMLKSGVLSEGEQMGNIITWFCKEGK 316
Query: 254 LEKAYKV--LDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAY 311
E+AY V L + +E+ L P + T I G A+++L ++ + +
Sbjct: 317 AEEAYSVYELAKTKEKSLPPRFVA-TLITALCKNDGTITFAQEMLGDLSGEARRRGIKPF 375
Query: 312 NAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMG 371
+ I + C + +++A L+ +M SKG P +NL + DL + + M
Sbjct: 376 SDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMES 435
Query: 372 LGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGE 431
G P+ + +I + K ++ A ++ + +K + L C + + E
Sbjct: 436 RGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDE 495
Query: 432 AEKCFLEMIEKGQKPSNVSFRRI 454
A K EM G +P+ + ++
Sbjct: 496 ALKLLNEMDRFGVQPNADEYNKL 518
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 110/245 (44%), Gaps = 13/245 (5%)
Query: 202 FRPNLQTFNILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVL 261
F P+L T W+ DA + G+ D V++N + +C+ L+ AY +
Sbjct: 153 FNPDLHTI------WEFLHDAP------SKYGIDIDAVSFNIAIKSFCELGILDGAYMAM 200
Query: 262 DEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIA 321
EM + L+PDV+TYT++I L + + M GC P++ +N I+
Sbjct: 201 REMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNR 260
Query: 322 KRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSC 381
+R +A DL+ M + P++ TYN+ + F+ + + +Y M G G PN +
Sbjct: 261 RRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIY 320
Query: 382 MFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIE 441
+I K ++A + D + K + ++L L G+L +A K +E++
Sbjct: 321 QTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQA-KSIMELVH 379
Query: 442 KGQKP 446
+ P
Sbjct: 380 RRVPP 384
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 72/187 (38%), Gaps = 4/187 (2%)
Query: 169 DFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTPEDAEV--- 224
D D FN +++ C+ + A + K P++ T+ L+S E +
Sbjct: 174 DIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNG 233
Query: 225 FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLG 284
+ M G P++ T+N + R A +L M + + PD ITY +I G
Sbjct: 234 LWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFF 293
Query: 285 LVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNAT 344
L PD A V M G P++ Y I C A AY + + K PN
Sbjct: 294 LARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLD 353
Query: 345 TYNLFFR 351
T + +
Sbjct: 354 TVEMLLK 360
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 74/177 (41%), Gaps = 1/177 (0%)
Query: 279 IIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSK- 337
II G G +A D M YGC V ++NAA++ L ++ + + SK
Sbjct: 112 IIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKY 171
Query: 338 GLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMA 397
G++ +A ++N+ + F L ++ M G P+ + LI K E+ +
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 398 LQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
LW MV KG +V L + + +A L M + +P ++++ +
Sbjct: 232 NGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMV 288
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 152/332 (45%), Gaps = 16/332 (4%)
Query: 154 RQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHS--LKHQFRPNLQTFNI 211
R+ + FR K D F +L+ C +A V HS +K L+ N
Sbjct: 163 REVAKLFRLMMKDGVLPDDFLFPKILQG-CANCGDVEAGKVIHSVVIKLGMSSCLRVSNS 221
Query: 212 LLSGWKTPED---AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERD 268
+L+ + + A FF++MRE DV+ +NS++ YC+ + E+A +++ EM +
Sbjct: 222 ILAVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEG 277
Query: 269 LSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAY 328
+SP ++T+ +IGG +G+ D A D++++M+ +G DV + A I +A
Sbjct: 278 ISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQAL 337
Query: 329 DLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLF 388
D+ +M G+ PNA T + ++ + +G + L+ ++
Sbjct: 338 DMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMY 397
Query: 389 KKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSN 448
K K+E A +++ + K YT S + C G G+A + F M + +P+
Sbjct: 398 SKCGKLEDARKVFDSVKNKDV--YTWNS--MITGYCQAGYCGKAYELFTRMQDANLRPNI 453
Query: 449 VSFRR-IKVLMELANRHEALQNLTQKMAVFGR 479
+++ I ++ + EA+ +L Q+M G+
Sbjct: 454 ITWNTMISGYIKNGDEGEAM-DLFQRMEKDGK 484
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 5/213 (2%)
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
+MG DV+ NSLVD+Y K +LE A KV D ++ +D V T+ S+I G G
Sbjct: 380 KMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKD----VYTWNSMITGYCQAGYCG 435
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKG-LNPNATTYNLF 349
KA ++ M++ P++ +N I + EA DL M G + N T+NL
Sbjct: 436 KAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLI 495
Query: 350 FRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGF 409
+ + + ++ +M PN+ + + L+ +M ++ G ++ +
Sbjct: 496 IAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNL 555
Query: 410 GSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEK 442
+ V + L D G + + FL M K
Sbjct: 556 DAIHAVKNALTDTYAKSGDIEYSRTIFLGMETK 588
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 120/302 (39%), Gaps = 48/302 (15%)
Query: 143 VLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQ 201
+LA AK + +FFRR + + D +N++L CQ +A + + K
Sbjct: 222 ILAVYAKCGELDFATKFFRRMR----ERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEG 277
Query: 202 FRPNLQTFNILLSGWK---TPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAY 258
P L T+NIL+ G+ + A +KM G+T DV T+ +++ +A
Sbjct: 278 ISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQAL 337
Query: 259 KVLDEMRERDLSPDVITYTSIIGG-------------------LGLV------------- 286
+ +M + P+ +T S + +G +
Sbjct: 338 DMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMY 397
Query: 287 ---GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNA 343
G+ + AR V +K DV +N+ I +C A +AY+L M L PN
Sbjct: 398 SKCGKLEDARKVFDSVKN----KDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNI 453
Query: 344 TTYNLFFRIFYWSNDLQSSWNMYHRMMGLG-CHPNTQSCMFLIRLFKKQEKVEMALQLWG 402
T+N + + D + +++ RM G NT + +I + + K + AL+L+
Sbjct: 454 ITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFR 513
Query: 403 DM 404
M
Sbjct: 514 KM 515
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 58/98 (59%)
Query: 250 KGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVP 309
KG + A L+ M+E + P V+ YT++I G + G+ DKA+++ +EM G P+V
Sbjct: 701 KGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVF 760
Query: 310 AYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYN 347
YN+ IR C+A REA L+ EM S+G NPN Y+
Sbjct: 761 TYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYS 798
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 66/120 (55%)
Query: 219 PEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTS 278
P A M+E+G+ P V+ Y +L+D Y EL+KA ++ EM + P+V TY S
Sbjct: 705 PLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNS 764
Query: 279 IIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKG 338
+I GL + G+ +A +LKEM+ GC P+ Y+ + A +L EA ++ EM KG
Sbjct: 765 MIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 204 PNLQTFNILLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKV 260
P++ + L+ G+ + A+ F++M G P+V TYNS++ C E +A +
Sbjct: 722 PSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWL 781
Query: 261 LDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCY 305
L EM R +P+ + Y++++G L G+ +AR V+KEM + G Y
Sbjct: 782 LKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKGHY 826
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 58/125 (46%)
Query: 284 GLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNA 343
G +P A L MKE G P V Y I + ++ L +A ++ EMT KG PN
Sbjct: 700 GKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNV 759
Query: 344 TTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGD 403
TYN R + + + + + M GC+PN L+ +K K+ A ++ +
Sbjct: 760 FTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKE 819
Query: 404 MVEKG 408
MV+KG
Sbjct: 820 MVKKG 824
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 101/220 (45%), Gaps = 8/220 (3%)
Query: 237 DVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVL 296
++V +NSLV L+ A ++ M + + PD IT+ S+ G +G+P+KA DV+
Sbjct: 290 NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVI 349
Query: 297 KEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWS 356
+MKE G P+V ++ A R A + +M +G+ PNA T + +I
Sbjct: 350 GKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCL 409
Query: 357 NDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYT--L 414
+ L S ++ + + L+ ++ K ++ A++++ + K S+ L
Sbjct: 410 SLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCML 469
Query: 415 VSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
+ +F G+ E F M+E G +P ++F +
Sbjct: 470 MGYAMF------GRGEEGIAAFSVMLEAGMEPDAITFTSV 503
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 98/213 (46%), Gaps = 17/213 (7%)
Query: 205 NLQTFNILLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVL 261
N+ +N L+SG +DAE +M + G+ PD +T+NSL Y + EKA V+
Sbjct: 290 NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVI 349
Query: 262 DEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIA 321
+M+E+ ++P+V+++T+I G G A V +M+E G P+ + ++
Sbjct: 350 GKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCL 409
Query: 322 KRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSS----WNMYHRMMGLGCHPN 377
L ++ K L +A ++ S DLQS+ W + ++ +
Sbjct: 410 SLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLA------ 463
Query: 378 TQSCMFL-IRLFKKQEKVEMALQLWGDMVEKGF 409
+ +CM + +F + E+ A + M+E G
Sbjct: 464 SWNCMLMGYAMFGRGEEGIAAFSV---MLEAGM 493
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 137/331 (41%), Gaps = 15/331 (4%)
Query: 144 LARTAKVCSVRQTVEFFRRFK----KLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLK 199
+ + +VCS ++ R+ +L + + + N+L+ + + +R V++S+K
Sbjct: 92 MVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMK 151
Query: 200 HQFRPNLQTFNILLSGWKT---PEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEK 256
+ NL ++N +LS + +DA +M G+ PD+VT+NSL+ Y +
Sbjct: 152 DR---NLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKD 208
Query: 257 AYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIR 316
A VL M+ L P + +S++ + G + + + + DV I
Sbjct: 209 AIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLID 268
Query: 317 NFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHP 376
+ L A + D M +K N +N ++ L+ + + RM G P
Sbjct: 269 MYIKTGYLPYARMVFDMMDAK----NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKP 324
Query: 377 NTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCF 436
+ + L + K E AL + G M EKG + +F G A K F
Sbjct: 325 DAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVF 384
Query: 437 LEMIEKGQKPSNVSFRR-IKVLMELANRHEA 466
++M E+G P+ + +K+L L+ H
Sbjct: 385 IKMQEEGVGPNAATMSTLLKILGCLSLLHSG 415
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 118/288 (40%), Gaps = 11/288 (3%)
Query: 173 NCFNALLRTLCQEKSMTDARNVYHSLKHQ--FRPNLQTFN---ILLSGWKTPEDAEVFFK 227
N L L +K A V+ L+ Q ++P T+ +LL P A+ F
Sbjct: 89 NTVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFD 148
Query: 228 KMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRE-RDLSPDVITYTSIIGGLGLV 286
+M E G+ P V Y +L+ Y + ++ A+ +LD+M+ PDV TY++++
Sbjct: 149 EMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDA 208
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEM-TSKGLNPNATT 345
Q D + KEM E P+ N + + R + ++ +M S P+ T
Sbjct: 209 SQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWT 268
Query: 346 YNLFFRIF--YWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGD 403
N+ +F D+ SW Y + G P T++ LI + K+ + +
Sbjct: 269 MNIILSVFGNMGKIDMMESW--YEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEY 326
Query: 404 MVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
M + F T + + + D+G E F +M +G K +F
Sbjct: 327 MRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTF 374
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 116/295 (39%), Gaps = 41/295 (13%)
Query: 102 FSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVM--VVLARTAKVCSVRQTVEF 159
F+ T+L + F+ + L E D+ LITP TV +VL+ +V
Sbjct: 196 FTYSTLLKACVDASQFDLVDSLYKEM---DERLITPNTVTQNIVLSGYGRVGR------- 245
Query: 160 FRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKT- 218
F + +K++ D L+ T C +P++ T NI+LS +
Sbjct: 246 FDQMEKVLSDM-------LVSTAC-------------------KPDVWTMNIILSVFGNM 279
Query: 219 --PEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITY 276
+ E +++K R G+ P+ T+N L+ Y K R +K V++ MR+ + TY
Sbjct: 280 GKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTY 339
Query: 277 TSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTS 336
+II VG +M+ G D + I + A + V
Sbjct: 340 NNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAK 399
Query: 337 KGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQ 391
+ N YN ++DL +Y RM C ++++ ++ ++K+
Sbjct: 400 FEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKE 454
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 95/225 (42%), Gaps = 17/225 (7%)
Query: 189 TDARNVYHSLKHQFRPN------LQTFNILLSGWKTPEDAEVFFKKMREMGVTPDVVTYN 242
T +NV L + + N +T + L++ + + EVF + P TY
Sbjct: 69 TPIKNVKKKLDRRSKANGWVNTVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYM 128
Query: 243 SLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEY 302
L+ + K + +A K+ DEM E L P V YT+++ D A +L +MK +
Sbjct: 129 KLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSF 188
Query: 303 -GCYPDVPAYNAAIRNFCIAKRLREAYDLVD----EMTSKGLNPNATTYNLFFRIFYWSN 357
C PDV Y+ ++ A + +DLVD EM + + PN T N+ +
Sbjct: 189 PQCQPDVFTYSTLLKACVDASQ----FDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVG 244
Query: 358 DLQSSWNMYHRMM-GLGCHPNTQSCMFLIRLFKKQEKVEMALQLW 401
+ M+ C P+ + ++ +F K++M ++ W
Sbjct: 245 RFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDM-MESW 288
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 10/157 (6%)
Query: 158 EFFRRFKKLVPDF----DTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILL 213
EF + LV F D ++L+ + + +AR V+ L Q +L FN ++
Sbjct: 134 EFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQ---DLVVFNAMI 190
Query: 214 SGWKT---PEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLS 270
SG+ ++A K M+ +G+ PDV+T+N+L+ + R EK ++L+ M
Sbjct: 191 SGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYK 250
Query: 271 PDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPD 307
PDV+++TSII GL Q +KA D K+M +G YP+
Sbjct: 251 PDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPN 287
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 98/212 (46%), Gaps = 14/212 (6%)
Query: 141 MVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDAR--NVYHSL 198
+V++ A+ +++++FFR K D +LL+ +++ D + H L
Sbjct: 86 VVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKA---SRNLLDREFGKMIHCL 142
Query: 199 KHQFRPNLQTFNI-----LLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRE 253
+F F + + S + +A F + E D+V +N+++ Y +
Sbjct: 143 VLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGE----QDLVVFNAMISGYANNSQ 198
Query: 254 LEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNA 313
++A ++ +M+ + PDVIT+ ++I G + +K ++L+ M G PDV ++ +
Sbjct: 199 ADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTS 258
Query: 314 AIRNFCIAKRLREAYDLVDEMTSKGLNPNATT 345
I + +A+D +M + GL PN+ T
Sbjct: 259 IISGLVHNFQNEKAFDAFKQMLTHGLYPNSAT 290
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 156/357 (43%), Gaps = 21/357 (5%)
Query: 96 GFFHTAFSLDTMLYILGRSRMFNHIW---DLLIEARWKDQTLITPRTVMVVLARTAKVCS 152
GF + +L+T+++ +S++ + +W + I+ R IT R ++ VL + ++
Sbjct: 194 GFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNE-ITIRIMIQVLCKEGRL-- 250
Query: 153 VRQTVEFFRRF--KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQT-- 208
++ V+ R K+ +P N +L+ + +E + ++ ++ LK N+
Sbjct: 251 -KEVVDLLDRICGKRCLPSVIVN--TSLVFRVLEEMRIEESMSL---LKRLLMKNMVVDT 304
Query: 209 --FNILLSGWKTPED---AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDE 263
++I++ D A F +M + G + + Y V V C+ ++++A ++L E
Sbjct: 305 IGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSE 364
Query: 264 MRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKR 323
M E +SP T+ +IGG G +K + + M G P A+N +++ +
Sbjct: 365 MEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIEN 424
Query: 324 LREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMF 383
+ A +++ + KG P+ TY+ R F ND+ + +++ M P +
Sbjct: 425 VNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRS 484
Query: 384 LIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMI 440
LI KVE + M ++ + D L +G A++ + EMI
Sbjct: 485 LIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEMI 541
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 99/222 (44%), Gaps = 12/222 (5%)
Query: 235 TPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARD 294
TP + ++ LV Y K R LE + V + + + VIT ++I K D
Sbjct: 163 TP--LVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIH----YSSKSKIDD 216
Query: 295 VLKEMKEYG----CYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNA-TTYNLF 349
++ + E YP+ I+ C RL+E DL+D + K P+ +L
Sbjct: 217 LVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLV 276
Query: 350 FRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGF 409
FR+ ++ S ++ R++ +T ++ K+ + A +++ +M+++GF
Sbjct: 277 FRVLE-EMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGF 335
Query: 410 GSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
+ + V V + C+ G + EAE+ EM E G P + +F
Sbjct: 336 SANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETF 377
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 86/209 (41%), Gaps = 6/209 (2%)
Query: 170 FDTNCF--NALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKT---PEDAE 223
F N F +R C++ + +A + ++ P +TFN L+ G+ E
Sbjct: 335 FSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGL 394
Query: 224 VFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGL 283
+ + M G+ P +N +V K + +A ++L + ++ PD TY+ +I G
Sbjct: 395 EYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGF 454
Query: 284 GLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNA 343
D+A + EM+ P + + I C ++ + M + + PNA
Sbjct: 455 IEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNA 514
Query: 344 TTYNLFFRIFYWSNDLQSSWNMYHRMMGL 372
Y+ + F D ++ +Y+ M+ +
Sbjct: 515 DIYDALIKAFQKIGDKTNADRVYNEMISV 543
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 114/255 (44%), Gaps = 11/255 (4%)
Query: 226 FKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGL 285
FK++ + G T V+T N+L+ K + + +++ + ++ + P+ IT +I L
Sbjct: 187 FKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCK 246
Query: 286 VGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATT 345
G+ + D+L + C P V + + R+ E+ L+ + K + +
Sbjct: 247 EGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIG 306
Query: 346 YNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMV 405
Y++ DL S+ ++ M+ G N+ +R+ ++ V+ A +L +M
Sbjct: 307 YSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEME 366
Query: 406 EKGFGSYTLVSDVLFD-LLCDMGKLGEAEK----CFLEMIEKGQKPSNVSFRR-IKVLME 459
E G Y D F+ L+ + G EK C + M+ +G PS +F +K + +
Sbjct: 367 ESGVSPY----DETFNCLIGGFARFGWEEKGLEYCEV-MVTRGLMPSCSAFNEMVKSVSK 421
Query: 460 LANRHEALQNLTQKM 474
+ N + A + LT+ +
Sbjct: 422 IENVNRANEILTKSI 436
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 149/344 (43%), Gaps = 43/344 (12%)
Query: 96 GFFHTAFSLDTMLY---ILGRSRMFNHIWDLLIEARWKDQTLITP--RTVMVVLARTAKV 150
G T + +T++ I G+ + + DL++E D + P RT V++ K
Sbjct: 145 GLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVD---VGPNIRTFNVLVQAWCKK 201
Query: 151 CSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHS---LKHQFRPNLQ 207
V + E ++ ++ DT +N + Q+ A + +K + +PN +
Sbjct: 202 KKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGR 261
Query: 208 TFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCK-------------- 250
T I++ G+ D F ++M+EM V ++V +NSL++ + +
Sbjct: 262 TCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTL 321
Query: 251 -----GRELE------KAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEM 299
E+E +VL M+E ++ DVITY++++ G +KA V KEM
Sbjct: 322 LLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEM 381
Query: 300 KEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDL 359
+ G PD AY+ + + AK ++A +L++ + + PN + + + +
Sbjct: 382 VKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSM 440
Query: 360 QSSWNMYHRMMGLGCHPNT---QSCMFLIRLFKKQEKVEMALQL 400
+ ++++M G PN ++ M+ K+ K E LQ+
Sbjct: 441 DDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQM 484
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 83/179 (46%), Gaps = 4/179 (2%)
Query: 203 RPNLQTFNILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLD 262
R + N+L+ + P +A+ FK + E G P +++Y +L+ ++ ++
Sbjct: 46 RSRTKLMNVLIERGR-PHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 263 EMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAK 322
E+ + D I + ++I G + A L +MKE G P YN I+ + IA
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 323 RLREAYDLVDEMTSKG---LNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNT 378
+ + +L+D M +G + PN T+N+ + + ++ +W + +M G P+T
Sbjct: 165 KPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDT 223
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 128/327 (39%), Gaps = 33/327 (10%)
Query: 170 FDTNCFNALLRTLCQEKSMTDARNVYHSLKH-QFRPNLQTFNILLSGWKT---PEDAEVF 225
D+ FNA++ + +M DA +K P T+N L+ G+ PE +
Sbjct: 113 LDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSEL 172
Query: 226 FKKMREMG---VTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGG 282
M E G V P++ T+N LV +CK +++E+A++V+ +M E + PD +TY +I
Sbjct: 173 LDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATC 232
Query: 283 LGLVGQPDKARDVLKE---MKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
G+ +A + E MKE P+ + +C R+R+ V M +
Sbjct: 233 YVQKGETVRAESEVVEKMVMKEKA-KPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRV 291
Query: 340 NPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVE---- 395
N +N F D + L E+VE
Sbjct: 292 EANLVVFNSLINGFVEVMD----------------RDGIDEVTLTLLLMSFNEEVELVGN 335
Query: 396 --MALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRR 453
M +Q+ M E + + + + G + +A + F EM++ G KP ++
Sbjct: 336 QKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSI 395
Query: 454 IKVLMELANRHEALQNLTQKMAVFGRP 480
+ A + + L + + V RP
Sbjct: 396 LAKGYVRAKEPKKAEELLETLIVESRP 422
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 108/249 (43%), Gaps = 30/249 (12%)
Query: 130 KDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMT 189
K++ RT +V+ + VR + F RR K++ + + FN+L+ +
Sbjct: 253 KEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRD 312
Query: 190 DARNVYHSL--------------------------KHQFRPNLQTFNILLSGWKTP---E 220
V +L + + ++ T++ +++ W + E
Sbjct: 313 GIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYME 372
Query: 221 DAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSII 280
A FK+M + GV PD Y+ L Y + +E +KA ++L+ + + P+V+ +T++I
Sbjct: 373 KAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI-VESRPNVVIFTTVI 431
Query: 281 GGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLN 340
G G D A V +M ++G P++ + + + K+ +A +++ M G+
Sbjct: 432 SGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVK 491
Query: 341 PNATTYNLF 349
P +T+ L
Sbjct: 492 PENSTFLLL 500
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 11/198 (5%)
Query: 250 KGR--ELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPD 307
+GR E + +K L E R P +I+YT+++ + + Q ++ E+++ G D
Sbjct: 58 RGRPHEAQTVFKTLAETGHR---PSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLD 114
Query: 308 VPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYH 367
+NA I F + + +A + +M GLNP +TYN + + + + S +
Sbjct: 115 SIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLD 174
Query: 368 RMMGLG---CHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLC 424
M+ G PN ++ L++ + K++KVE A ++ M E G T+ + +
Sbjct: 175 LMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYV 234
Query: 425 DMGKLGEAEKCFLEMIEK 442
G+ AE E++EK
Sbjct: 235 QKGETVRAES---EVVEK 249
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 94/202 (46%), Gaps = 10/202 (4%)
Query: 102 FSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFR 161
S + + ++G +M + L+ E K +IT TVM + + + + F+
Sbjct: 324 MSFNEEVELVGNQKMKVQVLTLMKECNVKAD-VITYSTVMNAWSSAG---YMEKAAQVFK 379
Query: 162 RFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGW---KT 218
K D + ++ L + + K A + +L + RPN+ F ++SGW +
Sbjct: 380 EMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGS 439
Query: 219 PEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTS 278
+DA F KM + GV+P++ T+ +L+ Y + ++ KA +VL MR + P+ T+
Sbjct: 440 MDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLL 499
Query: 279 IIGG---LGLVGQPDKARDVLK 297
+ GL + +KA + LK
Sbjct: 500 LAEAWRVAGLTDESNKAINALK 521
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 76/171 (44%), Gaps = 3/171 (1%)
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
G+P +A+ V K + E G P + +Y + + K+ +V E+ G ++ +
Sbjct: 59 GRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFF 118
Query: 347 NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE 406
N F S +++ + +M LG +P T + LI+ + K E + +L M+E
Sbjct: 119 NAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLE 178
Query: 407 KG---FGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRI 454
+G G +VL C K+ EA + +M E G +P V++ I
Sbjct: 179 EGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI 229
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 79/156 (50%), Gaps = 12/156 (7%)
Query: 205 NLQTFNILLSGWKTPED---AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAY--- 258
N T+ L+ G D A+ FK+M GV PD++TYN L+D CK +LEKA
Sbjct: 15 NTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAG 74
Query: 259 KVLD------EMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYN 312
KV D + + + P+V+TYT++I G G ++A + ++MKE G PD YN
Sbjct: 75 KVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYN 134
Query: 313 AAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNL 348
IR + +L+ EM S +A+TY L
Sbjct: 135 TLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGL 170
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 21/191 (10%)
Query: 263 EMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFC--- 319
EM +R L + +TYT++I GL G D A+++ KEM G PD+ YN + C
Sbjct: 6 EMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNG 65
Query: 320 ------IAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLG 373
+A ++ + +DL ++ KG+ PN TY F + ++ ++ +M G
Sbjct: 66 KLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDG 125
Query: 374 CHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG----SYTLVSDVLFDLLCDMGKL 429
P++ + LIR + + +L +M F +Y LV+D+L D
Sbjct: 126 PLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHD-------- 177
Query: 430 GEAEKCFLEMI 440
G +K FLEM+
Sbjct: 178 GRLDKGFLEML 188
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 13/169 (7%)
Query: 157 VEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSG 215
+E FR + +T + L++ L Q A+ ++ + P++ T+NILL G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 216 W------------KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDE 263
ED F + GV P+VVTY +++ +CK E+AY + +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 264 MRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYN 312
M+E PD TY ++I G + +++KEM+ D Y
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG 169
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 9/218 (4%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKHQFRP-NLQTFNILLSGW---KTPEDAEVFFKKM- 229
++ L+R+ Q A + + P + +FN LL+ K + F ++
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 230 -REMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQ 288
R + PD ++Y L+ YC EKA +++ +M+ + + I +T+I+ L G+
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 289 PDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLRE-AYDLVDEMTSKGLNPNATTYN 347
+ A ++ EM + GC D AYN +R K E +L++EM+S GL P+ +YN
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYN--VRIMSAQKESPERVKELIEEMSSMGLKPDTISYN 282
Query: 348 LFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLI 385
+ L + +Y + G C PN + LI
Sbjct: 283 YLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLI 320
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 103/251 (41%), Gaps = 9/251 (3%)
Query: 111 LGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDF 170
L + R F+ I + LIE+ D + ++ + + F + +
Sbjct: 77 LAKCRRFSDI-ETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPR 135
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSLKHQFR---PNLQTFNILLSGW---KTPEDAEV 224
FNALL K+ ++ + ++ P+ ++ IL+ + TPE A
Sbjct: 136 SAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIE 195
Query: 225 FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLG 284
++M+ G+ + + +++ K ELE A + +EM ++ D Y I
Sbjct: 196 IMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMS-A 254
Query: 285 LVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNAT 344
P++ +++++EM G PD +YN + +C L EA + + + PNA
Sbjct: 255 QKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAA 314
Query: 345 TY-NLFFRIFY 354
T+ L F + Y
Sbjct: 315 TFRTLIFHLCY 325
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 106/260 (40%), Gaps = 6/260 (2%)
Query: 153 VRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNI 211
VR ++ + ++ P+ T +N LLR Q + ++ L P++ TFN
Sbjct: 191 VRGYLDKMKGIERCQPNVVT--YNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNG 248
Query: 212 LLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERD 268
++ + ++ E +MR PD++T+N L+D Y K +E EK + +
Sbjct: 249 VMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSK 308
Query: 269 LSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAY 328
P + T+ S+I G DKA V K+M + P Y I + + A
Sbjct: 309 EKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAR 368
Query: 329 DLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLF 388
++ +E+ A+T N ++ + + ++H HP+ + FL + +
Sbjct: 369 EIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAY 428
Query: 389 KKQEKVEMALQLWGDMVEKG 408
K + E L M + G
Sbjct: 429 TKADMKEQVQILMKKMEKDG 448
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 95/208 (45%), Gaps = 9/208 (4%)
Query: 171 DTNCFNAL----LRTLCQEKSMTDARNVYHSLK--HQFRPNLQTFNILLSGWKTP---ED 221
D + +NAL L T + K++ R +K + +PN+ T+NILL + +
Sbjct: 167 DASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQ 226
Query: 222 AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIG 281
FK + V+PDV T+N ++D Y K +++ VL MR + PD+IT+ +I
Sbjct: 227 VNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLID 286
Query: 282 GLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNP 341
G + +K K + P +P +N+ I N+ A+ + +A + +M P
Sbjct: 287 SYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIP 346
Query: 342 NATTYNLFFRIFYWSNDLQSSWNMYHRM 369
+ TY ++ + + + ++ +
Sbjct: 347 SFITYECMIMMYGYCGSVSRAREIFEEV 374
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 111/254 (43%), Gaps = 4/254 (1%)
Query: 139 TVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL 198
T ++L A+ V Q F+ D FN ++ + + + V +
Sbjct: 210 TYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM 269
Query: 199 K-HQFRPNLQTFNILLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGREL 254
+ ++ +P++ TFN+L+ + E E FK + P + T+NS++ Y K R +
Sbjct: 270 RSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMI 329
Query: 255 EKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAA 314
+KA V +M + + P ITY +I G G +AR++ +E+ E NA
Sbjct: 330 DKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAM 389
Query: 315 IRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGC 374
+ +C EA L ++ ++P+A+TY ++ + ++ + + +M G
Sbjct: 390 LEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGI 449
Query: 375 HPNTQSCMFLIRLF 388
PN + + + +F
Sbjct: 450 VPNKRFFLEALEVF 463
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 93/223 (41%), Gaps = 7/223 (3%)
Query: 225 FFKKMREMGVTPDVVTYNSLVDVYC----KGRELEKAYKVLDEMR--ERDLSPDVITYTS 278
F +M+ G PD YN+L+ + K + LEK LD+M+ ER P+V+TY
Sbjct: 155 LFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIER-CQPNVVTYNI 213
Query: 279 IIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKG 338
++ G+ D+ + K++ PDV +N + + ++E ++ M S
Sbjct: 214 LLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNE 273
Query: 339 LNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMAL 398
P+ T+N+ + + + + +M P + +I + K ++ A
Sbjct: 274 CKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAE 333
Query: 399 QLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIE 441
++ M + + + + + + G + A + F E+ E
Sbjct: 334 WVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGE 376
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 79/194 (40%), Gaps = 9/194 (4%)
Query: 265 RERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFC----I 320
++R PD Y+ +I +G GQ A + EMK GC PD YNA I
Sbjct: 125 KQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDK 184
Query: 321 AKRLREAYDLVDEMTSKGL---NPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPN 377
AK L + +D+M KG+ PN TYN+ R F S + ++ + P+
Sbjct: 185 AKALEKVRGYLDKM--KGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPD 242
Query: 378 TQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFL 437
+ ++ + K ++ + M + +VL D + + E+ F
Sbjct: 243 VYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFK 302
Query: 438 EMIEKGQKPSNVSF 451
++ +KP+ +F
Sbjct: 303 SLMRSKEKPTLPTF 316
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 159/392 (40%), Gaps = 13/392 (3%)
Query: 85 LEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVL 144
L+F+ + R+ GF HT + + IL +++ + D L + + + R ++
Sbjct: 130 LKFFDWAARQPGFHHTRATFHAIFKILRGAKLVTLMIDFLDRSVGFESCRHSLRLCDALV 189
Query: 145 ARTAKVCSVRQTVEFF--RRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQF 202
A ++ F RF+ L D D+ ++ LL L +EK ++ + +
Sbjct: 190 VGYAVAGRTDIALQHFGNMRFRGL--DLDSFGYHVLLNALVEEKCFDSFDVIFDQISVRG 247
Query: 203 RPNLQTFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYK 259
T +IL+ + ++AE + + + LVD C R+ ++A K
Sbjct: 248 FVCAVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATK 307
Query: 260 VLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEY-GCYPDVPAYNAAIRNF 318
+LDE++ Y I L G + D L+++ GC +V YN+ +
Sbjct: 308 LLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQL 367
Query: 319 CIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNT 378
L YD++ EM +G++PN T N F + + + +Y +G P
Sbjct: 368 LKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTA 427
Query: 379 QSCMFLIRLFKKQEKVEMALQLWGDMVEKG--FGSYTLVSDVLFDLLCDMGKLGEAEKCF 436
S +LI E VE A + +++G G T + L + LC GK A +
Sbjct: 428 MSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFST--LTNALCWKGKPDMARELV 485
Query: 437 LEMIEKGQKPSNVS-FRRIKVLMELANRHEAL 467
+ E+ P ++ + I L ++ +AL
Sbjct: 486 IAAAERDLLPKRIAGCKIISALCDVGKVEDAL 517
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 128/319 (40%), Gaps = 18/319 (5%)
Query: 149 KVCSVRQTVEFFRRFKKLVPDFDTNC---FNALLRTLCQEKSMTDARNVYHSLKHQFRPN 205
K C + E + L+P+ C L+ LC ++ +A + +K N
Sbjct: 260 KFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGTVN 319
Query: 206 L-QTFNILL-----SGW-KTPEDAEVFFKKMREM-GVTPDVVTYNSLVDVYCKGRELEKA 257
+ + +NI + +G+ P D F +K+ + G +V YNS+V K L+
Sbjct: 320 MDRAYNIWIRALIKAGFLNNPAD---FLQKISPLEGCELEVFRYNSMVFQLLKENNLDGV 376
Query: 258 YKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRN 317
Y +L EM R +SP+ T + + G D+A ++ + E G P +YN I
Sbjct: 377 YDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHT 436
Query: 318 FCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPN 377
C + + +AYD++ +G T++ W + + P
Sbjct: 437 LCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPK 496
Query: 378 TQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFG-SYTLVSDVLFDLLCDM-GKLGEAEKC 435
+ +I KVE AL + + G S+ + + +++ + M G + A K
Sbjct: 497 RIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDI--AAKL 554
Query: 436 FLEMIEKGQKPSNVSFRRI 454
+ M EKG P+ +R +
Sbjct: 555 IIRMQEKGYTPTRSLYRNV 573
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 133/345 (38%), Gaps = 12/345 (3%)
Query: 83 QTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTL--ITPRTV 140
+ LE YR + GF TA S + +++ L + +D+L A + L T T+
Sbjct: 410 EALELYR-SRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTL 468
Query: 141 MVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-K 199
L K R+ V + L+P C ++ LC + DA + K
Sbjct: 469 TNALCWKGKPDMARELV-IAAAERDLLPKRIAGC--KIISALCDVGKVEDALMINELFNK 525
Query: 200 HQFRPNLQTFNILLSGWKTPEDAEVFFK---KMREMGVTPDVVTYNSLVDVYCKGRELEK 256
+ + F L+ G T ++ K +M+E G TP Y +++ C+ EK
Sbjct: 526 SGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEK 585
Query: 257 AY-KVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAI 315
+ L + + V Y I G G G+P AR V M G P V + +
Sbjct: 586 NFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILML 645
Query: 316 RNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCH 375
+++ +++ +A ++ +G Y + +N L + + M G G
Sbjct: 646 QSYLKNEKIADALHFFHDLREQG-KTKKRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQ 704
Query: 376 PNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLF 420
P+ + I+ +EK + A+ L + + G + +VL
Sbjct: 705 PSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRRITAFIGNVLL 749
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 106/261 (40%), Gaps = 6/261 (2%)
Query: 153 VRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNI 211
VR ++ + ++ P+ T +N LLR Q + ++ L P++ TFN
Sbjct: 191 VRGYLDKMKGIERCQPNVVT--YNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNG 248
Query: 212 LLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERD 268
++ + ++ E +MR PD++T+N L+D Y K +E EK + +
Sbjct: 249 VMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSK 308
Query: 269 LSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAY 328
P + T+ S+I G DKA V K+M + P Y I + + A
Sbjct: 309 EKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAR 368
Query: 329 DLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLF 388
++ +E+ A+T N ++ + + ++H HP+ + FL + +
Sbjct: 369 EIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAY 428
Query: 389 KKQEKVEMALQLWGDMVEKGF 409
K + E L M + G
Sbjct: 429 TKADMKEQVQILMKKMEKDGI 449
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 95/208 (45%), Gaps = 9/208 (4%)
Query: 171 DTNCFNAL----LRTLCQEKSMTDARNVYHSLK--HQFRPNLQTFNILLSGWKTP---ED 221
D + +NAL L T + K++ R +K + +PN+ T+NILL + +
Sbjct: 167 DASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQ 226
Query: 222 AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIG 281
FK + V+PDV T+N ++D Y K +++ VL MR + PD+IT+ +I
Sbjct: 227 VNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLID 286
Query: 282 GLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNP 341
G + +K K + P +P +N+ I N+ A+ + +A + +M P
Sbjct: 287 SYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIP 346
Query: 342 NATTYNLFFRIFYWSNDLQSSWNMYHRM 369
+ TY ++ + + + ++ +
Sbjct: 347 SFITYECMIMMYGYCGSVSRAREIFEEV 374
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 111/254 (43%), Gaps = 4/254 (1%)
Query: 139 TVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL 198
T ++L A+ V Q F+ D FN ++ + + + V +
Sbjct: 210 TYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM 269
Query: 199 K-HQFRPNLQTFNILLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGREL 254
+ ++ +P++ TFN+L+ + E E FK + P + T+NS++ Y K R +
Sbjct: 270 RSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMI 329
Query: 255 EKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAA 314
+KA V +M + + P ITY +I G G +AR++ +E+ E NA
Sbjct: 330 DKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAM 389
Query: 315 IRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGC 374
+ +C EA L ++ ++P+A+TY ++ + ++ + + +M G
Sbjct: 390 LEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGI 449
Query: 375 HPNTQSCMFLIRLF 388
PN + + + +F
Sbjct: 450 VPNKRFFLEALEVF 463
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 93/223 (41%), Gaps = 7/223 (3%)
Query: 225 FFKKMREMGVTPDVVTYNSLVDVYC----KGRELEKAYKVLDEMR--ERDLSPDVITYTS 278
F +M+ G PD YN+L+ + K + LEK LD+M+ ER P+V+TY
Sbjct: 155 LFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIER-CQPNVVTYNI 213
Query: 279 IIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKG 338
++ G+ D+ + K++ PDV +N + + ++E ++ M S
Sbjct: 214 LLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNE 273
Query: 339 LNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMAL 398
P+ T+N+ + + + + +M P + +I + K ++ A
Sbjct: 274 CKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAE 333
Query: 399 QLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIE 441
++ M + + + + + + G + A + F E+ E
Sbjct: 334 WVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGE 376
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 79/194 (40%), Gaps = 9/194 (4%)
Query: 265 RERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFC----I 320
++R PD Y+ +I +G GQ A + EMK GC PD YNA I
Sbjct: 125 KQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDK 184
Query: 321 AKRLREAYDLVDEMTSKGL---NPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPN 377
AK L + +D+M KG+ PN TYN+ R F S + ++ + P+
Sbjct: 185 AKALEKVRGYLDKM--KGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPD 242
Query: 378 TQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFL 437
+ ++ + K ++ + M + +VL D + + E+ F
Sbjct: 243 VYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFK 302
Query: 438 EMIEKGQKPSNVSF 451
++ +KP+ +F
Sbjct: 303 SLMRSKEKPTLPTF 316
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 118/271 (43%), Gaps = 22/271 (8%)
Query: 77 SHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLIT 136
+ ++P L+ +R+T +++G+ H + TM+ + N + L+ E +
Sbjct: 84 AQSDPDLALDIFRWTAQQRGYKHNHEAYHTMIKQAITGKRNNFVETLIEEVIAGACEMSV 143
Query: 137 PRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYH 196
P ++ + C R+ + F R F + +N +LR+ D++
Sbjct: 144 PLYNCII-----RFCCGRKFL-FNRAF---------DVYNKMLRS-------DDSKPDLE 181
Query: 197 SLKHQFRPNLQTFNILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEK 256
+ L+ FN L + K+M+ GV PD N ++ Y K E+++
Sbjct: 182 TYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDE 241
Query: 257 AYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIR 316
A +V EM P+ TY+ ++ G+ G+ + KEM+ G P+ Y I
Sbjct: 242 AIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLIC 301
Query: 317 NFCIAKRLREAYDLVDEMTSKGLNPNATTYN 347
+ + +RL EA ++V +M + L+P+ TYN
Sbjct: 302 SLSMERRLDEAVEVVYDMLANSLSPDMLTYN 332
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 99/234 (42%), Gaps = 17/234 (7%)
Query: 238 VVTYNSLVDVYCKGREL--EKAYKVLDEM-RERDLSPDVITYTSI-------IGGLGLVG 287
V YN ++ +C GR+ +A+ V ++M R D PD+ TYT + L +
Sbjct: 143 VPLYNCIIR-FCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCY 201
Query: 288 QPDKA-RDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
A R + K+MK G PD N I+ + + EA + EM G PNA TY
Sbjct: 202 VYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTY 261
Query: 347 NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE 406
+ + + Y M G PN M LI + +++ A+++ DM+
Sbjct: 262 SYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLA 321
Query: 407 KGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNV-SFRRIKVLME 459
L + + LC G+ EA LEM+E+ +K V R + LM+
Sbjct: 322 NSLSPDMLTYNTVLTELCRGGRGSEA----LEMVEEWKKRDPVMGERNYRTLMD 371
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 117/253 (46%), Gaps = 7/253 (2%)
Query: 226 FKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDL-SPDV-ITYTSIIGGL 283
+ M G P+ N ++DV K + A ++ + +R R+ S D+ +++ GG
Sbjct: 131 YTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNFFSFDIALSHFCSRGGR 190
Query: 284 G-LVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPN 342
G LVG + VLK M G YP+ + +R C + EA+ +V M G++ +
Sbjct: 191 GDLVG----VKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVS 246
Query: 343 ATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWG 402
+++ F+ S + Q + +++++M+ +GC PN + LI+ F V+ A +
Sbjct: 247 VNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLS 306
Query: 403 DMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELAN 462
+ +G ++ +++ +G+ EA K F + ++ P +F I + L+
Sbjct: 307 KVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSG 366
Query: 463 RHEALQNLTQKMA 475
+ + + +T +
Sbjct: 367 KFDLVPRITHGIG 379
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 131/292 (44%), Gaps = 10/292 (3%)
Query: 68 DQVLKRVRFSHANPSQTLEFYRYTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEA 127
D V +R S A+ +TL F+ + ++ +FH + D M+ ++ + + D +IE
Sbjct: 40 DNVYSCLRESPADL-KTLNFFFWCAKQNNYFHDDRAFDHMVGVVEKLTREYYSIDRIIER 98
Query: 128 RWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKS 187
I PR +++L + + +E + +T N ++ +
Sbjct: 99 LKISGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNV 158
Query: 188 MTDARNVYHSLKHQFRPNLQTFNILLS------GWKTPEDAEVFFKKMREMGVTPDVVTY 241
+ A ++ ++ FR N +F+I LS G ++ K+M G P+ +
Sbjct: 159 VNGALEIFEGIR--FR-NFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERF 215
Query: 242 NSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKE 301
++ + C+ + +A++V+ M +S V ++ ++ G G+P KA D+ +M +
Sbjct: 216 GQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQ 275
Query: 302 YGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIF 353
GC P++ Y + I+ F + EA+ ++ ++ S+GL P+ NL +
Sbjct: 276 IGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTY 327
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 131/277 (47%), Gaps = 21/277 (7%)
Query: 175 FNALLRTLCQEKSMTDARNVYH-SLKHQFRPNLQTFNILLSGW---KTPEDAEVFFKKMR 230
F +LR C+ +++A V + ++ +++L+SG+ P+ A F KM
Sbjct: 215 FGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMI 274
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
++G +P++VTY SL+ + +++A+ VL +++ L+PD++ +I +G+ +
Sbjct: 275 QIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFE 334
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSK-GLNPNATTYNL- 348
+AR V +++ PD + + + + C++ + +DLV +T G + + T NL
Sbjct: 335 EARKVFTSLEKRKLVPDQYTFASILSSLCLSGK----FDLVPRITHGIGTDFDLVTGNLL 390
Query: 349 ---FFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMV 405
F +I Y S L+ M ++ L C+ T L R A++++ ++
Sbjct: 391 SNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCR----GGAPRAAIKMYKIII 446
Query: 406 EKGFGSYTLVSDVLFDLLCDMGKLGEA----EKCFLE 438
++ + D L ++GK A ++C LE
Sbjct: 447 KEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILE 483
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 87/217 (40%), Gaps = 38/217 (17%)
Query: 166 LVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGWKTPEDAEV 224
L PD C N ++ T + +AR V+ SL K + P+ TF +LS ++
Sbjct: 313 LAPDI-VLC-NLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDL 370
Query: 225 FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLG 284
+ +G D+VT N L + + K A KVL M +D + D TYT + L
Sbjct: 371 VPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALC 430
Query: 285 LVGQPDKAR----------------------DVLKEMKEYGC------------YP-DVP 309
G P A D L E+ +Y YP DV
Sbjct: 431 RGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVV 490
Query: 310 AYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
+Y AI+ AKR+ EAY L +M G+ PN TY
Sbjct: 491 SYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTY 527
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 105/254 (41%), Gaps = 3/254 (1%)
Query: 204 PNLQTFNIL---LSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKV 260
P T +IL L+ +AE + E + D V YN+L+ + +L+ A ++
Sbjct: 737 PGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEI 796
Query: 261 LDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCI 320
+ M + + TY ++I G Q DKA ++ + G Y D Y I ++
Sbjct: 797 YERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGK 856
Query: 321 AKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQS 380
++ EA L EM KG+ P +YN+ +I S + M G + +
Sbjct: 857 GGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLST 916
Query: 381 CMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMI 440
+ LI+++ + + A + + EKG L L G + EAE+ + +M
Sbjct: 917 YLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMS 976
Query: 441 EKGQKPSNVSFRRI 454
E G P + R I
Sbjct: 977 EAGISPDSACKRTI 990
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 104/239 (43%), Gaps = 3/239 (1%)
Query: 235 TPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARD 294
TP S++D Y + LE AY + E E+ P +T + ++ L G+ +A
Sbjct: 701 TPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEH 760
Query: 295 VLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFY 354
+ + E D YN I+ A +L+ A ++ + M + G+ + TYN ++
Sbjct: 761 ISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYG 820
Query: 355 WSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTL 414
L + ++ G + + + +I + K K+ AL L+ +M +KG T
Sbjct: 821 RGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTP 880
Query: 415 VSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVS--FRRIKVLMELANRHEALQNLT 471
+++ +C +L L+ +E+ + +++S I+V E + EA + +T
Sbjct: 881 SYNMMVK-ICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTIT 938
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 127/318 (39%), Gaps = 9/318 (2%)
Query: 167 VPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQT--FNILLSGWKTPED--- 221
V D +L +E ++ + + + L F+ +L + N ++S + D
Sbjct: 597 VSQLDVMALGLMLNLRLKEGNLNETKAI---LNLMFKTDLGSSAVNRVISSFVREGDVSK 653
Query: 222 AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIG 281
AE+ + +G+ + T +L+ VY + +L++A ++ E +P S+I
Sbjct: 654 AEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGESK-TPGKSVIRSMID 712
Query: 282 GLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNP 341
G + A + E E GC P + + + REA + K +
Sbjct: 713 AYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIEL 772
Query: 342 NATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLW 401
+ YN + + LQ + +Y RM G + Q+ +I ++ + +++ A++++
Sbjct: 773 DTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIF 832
Query: 402 GDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELA 461
+ G + + GK+ EA F EM +KG KP S+ + + +
Sbjct: 833 SNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATS 892
Query: 462 NRHEALQNLTQKMAVFGR 479
H + L Q M GR
Sbjct: 893 RLHHEVDELLQAMERNGR 910
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 95/260 (36%), Gaps = 39/260 (15%)
Query: 215 GWKTPEDAEVFFKKMR-EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDV 273
GW+ D FF M+ ++ P VV Y ++ +Y + +++ A + EM E PD
Sbjct: 167 GWRQVRD---FFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDA 223
Query: 274 IT-----------------------------------YTSIIGGLGLVGQPDKARDVLKE 298
+ Y ++ L K D+ E
Sbjct: 224 VACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLE 283
Query: 299 MKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSND 358
M E G P+ Y + ++ EA EM S G P TY+ + + D
Sbjct: 284 MVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGD 343
Query: 359 LQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDV 418
+ + +Y M G P+ +C ++ L+ K E AL L+ DM + ++ +
Sbjct: 344 WEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGL 403
Query: 419 LFDLLCDMGKLGEAEKCFLE 438
+ + +G +A+ F E
Sbjct: 404 IIRIYGKLGLFHDAQSMFEE 423
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/319 (19%), Positives = 129/319 (40%), Gaps = 60/319 (18%)
Query: 204 PNLQTFNILLSGWKT---PEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKV 260
PN T+ +++S + E+A F +M+ +G P+ VTY+S++ + K + EKA +
Sbjct: 291 PNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGL 350
Query: 261 LDEMRERDLSP------------------------------DVITYTSIIGGL-----GL 285
++MR + + P + I +I GL G
Sbjct: 351 YEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGK 410
Query: 286 VGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATT 345
+G A+ + +E + D Y A + + + +A D+++ M ++ + +
Sbjct: 411 LGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFA 470
Query: 346 YNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMV 405
Y + + + ++ + + + G P+ SC ++ L+ + E A
Sbjct: 471 YIVMLQCYAKIQNVDCAEEAFRALSKTGL-PDASSCNDMLNLYTRLNLGEKA-------- 521
Query: 406 EKGFGSYTLVSDVLFDL---------LCDMGKLGEAEKCFLEMIEKGQKPSNVSFRRIKV 456
KGF +V V FD+ C G + EA+ ++M + + N + +
Sbjct: 522 -KGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAE 580
Query: 457 LMELAN---RHEALQNLTQ 472
M + N +HEA+ N++Q
Sbjct: 581 SMHIVNKHDKHEAVLNVSQ 599
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 70/178 (39%)
Query: 271 PDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDL 330
P V+ YT ++ G VG+ A + EM E GC PD A + + R
Sbjct: 186 PSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTF 245
Query: 331 VDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKK 390
+ + + + + YN + +++ M+ G PN + ++ + K
Sbjct: 246 YKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAK 305
Query: 391 QEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSN 448
Q E AL+ +G+M GF + + L G +A + +M +G PSN
Sbjct: 306 QGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSN 363
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 10/206 (4%)
Query: 174 CFNALLRTLCQEKSMTDARNVYHSLKHQFRP------NLQTFNILLSGWKTP---EDAEV 224
+N +L L + +A ++ ++K + P NL TFN++++G+ E+A
Sbjct: 312 AYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAME 371
Query: 225 FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLG 284
F++M + +PD +++N+L++ C L +A K+ EM E+++ PD TY ++
Sbjct: 372 VFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCF 431
Query: 285 LVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNAT 344
G+ D+ K M E P++ YN A +L +A D M SK L +
Sbjct: 432 KEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSK-LKMDDE 490
Query: 345 TYNLFFRIFYWSNDLQSSWNMYHRMM 370
Y R + L + M+
Sbjct: 491 AYKFIMRALSEAGRLDEMLKIVDEML 516
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/389 (21%), Positives = 149/389 (38%), Gaps = 67/389 (17%)
Query: 113 RSRMFNHIWDLLIEARWKDQ--------------TLITPRTVMVVLARTAKVCSVRQTVE 158
R + NHI L+ E ++ T+ T TV+ R AK ++ Q
Sbjct: 95 RLDLHNHILKLIRENDLEEAALYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHG 154
Query: 159 FFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKH--------QFRPNLQTFN 210
F + + P+ T +N + + + D R +L+H P++ TF
Sbjct: 155 FINQ-AGIAPNIIT--YNLIFQ------AYLDVRKPEIALEHYKLFIDNAPLNPSIATFR 205
Query: 211 ILLSGWKTPEDAEVFFKKMREM---GVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRER 267
IL+ G + ++ E + +M G D V Y+ L+ K + + K+ E++E+
Sbjct: 206 ILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEK 265
Query: 268 --DLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYG--CYPDVPAYNAAIRNFCIA-- 321
D + Y ++ G +KEM++ CY + N+ +R +A
Sbjct: 266 LGGFVDDGVVYGQLMKGY-----------FMKEMEKEAMECYEEAVGENSKVRMSAMAYN 314
Query: 322 ---------KRLREAYDLVDEMTSKGLNP------NATTYNLFFRIFYWSNDLQSSWNMY 366
+ EA L D K NP N T+N+ + + + ++
Sbjct: 315 YVLEALSENGKFDEALKLFD-AVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVF 373
Query: 367 HRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDM 426
+M C P+T S L+ E + A +L+G+M EK +L D
Sbjct: 374 RQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKE 433
Query: 427 GKLGEAEKCFLEMIEKGQKPSNVSFRRIK 455
GK+ E + M+E +P+ + R++
Sbjct: 434 GKIDEGAAYYKTMVESNLRPNLAVYNRLQ 462
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 140/317 (44%), Gaps = 15/317 (4%)
Query: 163 FKKLVPDFDT--NCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKTPE 220
F+K+ + D+ N N + +EK+ D RN H L+ + L LS
Sbjct: 66 FRKVSSELDSSFNGENVVCGLELEEKTAGD-RNRIHFLEERNEETLSKRLRKLSRLDKVR 124
Query: 221 DAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSII 280
A F MR +G+ P+ NS + + +++KA+ V + MR+++ + TY+ ++
Sbjct: 125 SALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKE-NVTGHTYSLML 183
Query: 281 GGLGLVGQPDKA----RDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYD---LVDE 333
+ V + A R++ +E K C+ DV YN AI + R+ Y+ +
Sbjct: 184 KAVAEVKGCESALRMFRELEREPKRRSCF-DVVLYNTAIS---LCGRINNVYETERIWRV 239
Query: 334 MTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEK 393
M G TY+L IF + + ++Y M+ + +I K+EK
Sbjct: 240 MKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEK 299
Query: 394 VEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSFRR 453
++AL+++ M++KG + + L + L GK+G K + + G KP ++
Sbjct: 300 WDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNA 359
Query: 454 IKVLMELANRHEALQNL 470
+ + ANR+E + L
Sbjct: 360 LLTALYKANRYEDVLQL 376
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 102/239 (42%), Gaps = 25/239 (10%)
Query: 121 WDLLIE------ARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNC 174
WDL ++ + L+ T++ L + KV V + + K L D
Sbjct: 300 WDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLV---FKVYSVLKSLGHKPDEYT 356
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFN------ILLSGWKTP--EDAEVFF 226
+NALL L + D ++ ++ + NL N ++S K E A
Sbjct: 357 WNALLTALYKANRYEDVLQLFDMIRSE---NLCCLNEYLYNTAMVSCQKLGYWEKAVKLL 413
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
+M G+T +YN ++ K R+ + A V + M +RD P+ TY S++
Sbjct: 414 YEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWG 473
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATT 345
D+ D+LK+++ PDV YNAAI C+ + + A +L +M GL P+ T
Sbjct: 474 SLWDEVEDILKKVE-----PDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKT 527
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 117/266 (43%), Gaps = 22/266 (8%)
Query: 200 HQFRPNLQTFNILLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEK 256
H +P++ T++IL+ + + + MR G+ P+ +TYN+L+D Y K + +
Sbjct: 215 HNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVE 274
Query: 257 AYKVLDEM-RERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAI 315
L +M E D PD T S + G GQ + + ++ + G P++ +N +
Sbjct: 275 MESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILL 334
Query: 316 RNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCH 375
++ + ++ +++ M + TYN+ F + DL+ ++ M
Sbjct: 335 DSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIF 394
Query: 376 PNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLL---CDMGKLGEA 432
P SC+ L L + + A ++ G + + SD+ DL+ C + G
Sbjct: 395 P---SCVTLCSLVRAYGRASKADKIGGVL------RFIENSDIRLDLVFFNCLVDAYGRM 445
Query: 433 E-----KCFLEMIE-KGQKPSNVSFR 452
E K LE++E KG KP +++R
Sbjct: 446 EKFAEMKGVLELMEKKGFKPDKITYR 471
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 6/218 (2%)
Query: 220 EDAEVFFKKMRE-MGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTS 278
E A F+ +RE + P+V Y L+ + K ++ EKA+++ EM + YT+
Sbjct: 131 ESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTA 190
Query: 279 IIGGLGLVGQPDKARDVLKEMK-EYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSK 337
++ G+ D A +L+ MK + C PDV Y+ I++F + DL+ +M +
Sbjct: 191 LVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQ 250
Query: 338 GLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGL-GCHPNTQSCMFLIRLFKKQEKVEM 396
G+ PN TYN + + + +M+G C P++ + +R F ++EM
Sbjct: 251 GIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEM 310
Query: 397 ALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEK 434
+ G ++L D GK G +K
Sbjct: 311 MENCYEKFQSSGIEPNIRTFNILLD---SYGKSGNYKK 345
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 81/187 (43%), Gaps = 4/187 (2%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKTP---EDAEVFF 226
D+ N+ LR + N Y + PN++TFNILL + +
Sbjct: 291 DSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVM 350
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
+ M++ + +VTYN ++D + + +L++ + M+ + P +T S++ G
Sbjct: 351 EYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRA 410
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
+ DK VL+ ++ D+ +N + + ++ E +++ M KG P+ TY
Sbjct: 411 SKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITY 470
Query: 347 NLFFRIF 353
+ +
Sbjct: 471 RTMVKAY 477
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 86/200 (43%), Gaps = 3/200 (1%)
Query: 255 EKAYKVLDEMRERD-LSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNA 313
E A +V + +RE+ P+V Y +I LG QP+KA ++ +EM GC + Y A
Sbjct: 131 ESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTA 190
Query: 314 AIRNFCIAKRLREAYDLVDEM-TSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGL 372
+ + + R A+ L++ M +S P+ TY++ + F ++ M
Sbjct: 191 LVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQ 250
Query: 373 GCHPNTQSCMFLIRLFKKQEK-VEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGE 431
G PNT + LI + K + VEM L + E + + G++
Sbjct: 251 GIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEM 310
Query: 432 AEKCFLEMIEKGQKPSNVSF 451
E C+ + G +P+ +F
Sbjct: 311 MENCYEKFQSSGIEPNIRTF 330
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 124/302 (41%), Gaps = 34/302 (11%)
Query: 101 AFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVM--VVLARTAKVCSVRQTVE 158
AF+ T++ + ++M+ W L ++ K +TP T +++ A V Q
Sbjct: 374 AFTYCTIIKVFADAKMWK--WALKVKDDMK-SVGVTPNTHTWSSLISACANAGLVEQANH 430
Query: 159 FFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLK-HQFRPNLQTFNILLSGWK 217
F + ++ CFN LL + A ++ S K +L +I+ G
Sbjct: 431 LFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRT 490
Query: 218 TPEDA---------------EVFFKKMREMGVTPDVVTYNSLVDV----YCKGRELEKAY 258
+ + + + + P TYN L+ Y +G+EL
Sbjct: 491 SSPNILKNNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKACGTDYYRGKEL---- 546
Query: 259 KVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNF 318
+DEM+ LSP+ IT++++I G G + A +L+ M G PDV AY AI+
Sbjct: 547 --MDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKIC 604
Query: 319 CIAKRLREAYDLVDEMTSKGLNPNATTYNLFF--RIFYWS-NDLQSSWNMYHRMMGLGCH 375
K L+ A+ L +EM + PN TYN R Y S +++ +Y M G
Sbjct: 605 AENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYK 664
Query: 376 PN 377
PN
Sbjct: 665 PN 666
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 94/202 (46%), Gaps = 20/202 (9%)
Query: 225 FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLG 284
++ + + + P++ NSL++V +L KV M+ D++ D+ +Y ++
Sbjct: 289 IYEDLLKENIKPNIYVINSLMNV--NSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCC 346
Query: 285 LVGQPDKARDVLKE---MKEYGCYP-DVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLN 340
L G+ D A+D+ KE M+ G D Y I+ F AK + A + D+M S G+
Sbjct: 347 LAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVT 406
Query: 341 PNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQ-----------SCMF--LIRL 387
PN T++ + ++ + +++ M+ GC PN+Q +C + RL
Sbjct: 407 PNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRL 466
Query: 388 FKKQEKVEMALQLWG-DMVEKG 408
F+ + + L+ D+V KG
Sbjct: 467 FQSWKGSSVNESLYADDIVSKG 488
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/392 (19%), Positives = 149/392 (38%), Gaps = 68/392 (17%)
Query: 156 TVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNIL--L 213
T++ ++ + L D +N LL+T C + A+++Y K L +
Sbjct: 319 TLKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYC 378
Query: 214 SGWKTPEDAEVFF------KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRER 267
+ K DA+++ M+ +GVTP+ T++SL+ +E+A + +EM
Sbjct: 379 TIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLAS 438
Query: 268 DLSPDVITYTSIIGGLGLVGQPDKA------------------RDVLKE--------MKE 301
P+ + ++ Q D+A D++ + +K
Sbjct: 439 GCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKN 498
Query: 302 YG--------------------CY-PDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLN 340
G C+ P YN ++ C R +L+DEM S GL+
Sbjct: 499 NGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLK-ACGTDYYR-GKELMDEMKSLGLS 556
Query: 341 PNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQL 400
PN T++ + S D++ + + M G P+ + I++ + + +++A L
Sbjct: 557 PNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSL 616
Query: 401 WGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKC---FLEMIEKGQKPSNVSFRRI--- 454
+ +M + + L G L E +C + +M G KP++ + +
Sbjct: 617 FEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIEE 676
Query: 455 ---KVLMELANRHEALQNLTQKMAVFGRPVQV 483
V+ E + + + Q+ GRPV +
Sbjct: 677 WCEGVIQENGQSQDKISD--QEGDNAGRPVSL 706
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 128/310 (41%), Gaps = 42/310 (13%)
Query: 80 NPSQTLEFYR-YTGRRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPR 138
+P + L Y+ + + ++++ + L +S+ F+ I + LIE+ K+ I
Sbjct: 45 DPDKALAIYKSVSNNSTSPLSSRYAMELTVQRLAKSQRFSDI-EALIESH-KNNPKIKTE 102
Query: 139 TVMVVLART-AKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHS 197
T + L R+ + ++ F KL FNALL +++
Sbjct: 103 TFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHS-------DLFER 155
Query: 198 LKHQFRPNLQTFNILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKA 257
+ F Q +N +TPD ++Y L+ YC + EKA
Sbjct: 156 VPQLFDEFPQRYN----------------------NITPDKISYGMLIKSYCDSGKPEKA 193
Query: 258 YKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRN 317
+++ +M + + +I +T+I+G L G D+A + EM GC D YN + N
Sbjct: 194 MEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRLMN 253
Query: 318 FC--IAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCH 375
+R++E L++EM+S GL P+ +YN + + + +Y GL
Sbjct: 254 AAKESPERVKE---LMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYE---GLE-Q 306
Query: 376 PNTQSCMFLI 385
PN + LI
Sbjct: 307 PNAATFRTLI 316
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 115/238 (48%), Gaps = 12/238 (5%)
Query: 200 HQFRPNLQTFNILLSGWKTPEDAEVF------FKKMREMGVTPDVVTYNSLVDVYCKGRE 253
H+ P ++T L + ++ A +F F++M ++G VV++N+L+
Sbjct: 93 HKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDL 152
Query: 254 LEKAYKVLDEMRER--DLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAY 311
E+ ++ DE +R +++PD I+Y +I G+P+KA +++++M+ G + A+
Sbjct: 153 FERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAF 212
Query: 312 NAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDL-QSSWNMYHRMM 370
+ + + EA L EM +KG + + T YN+ R+ + + + + M
Sbjct: 213 TTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNV--RLMNAAKESPERVKELMEEMS 270
Query: 371 GLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSY-TLVSDVLFDLLCDMG 427
+G P+T S +L+ + + + A +++ + + ++ TL+ + + L D G
Sbjct: 271 SVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLEQPNAATFRTLIFHLCINGLYDQG 328
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%)
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
++A F MR+ G P+VV Y ++V+ +CK ++E A ++ +M+ ++P+ +Y +
Sbjct: 148 QEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVL 207
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
+ GL D A EM E G P+VP + + C K + +A +D + KG
Sbjct: 208 VQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGF 267
Query: 340 NPNATTYNLF 349
N F
Sbjct: 268 AVNVKAVKEF 277
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 38/192 (19%)
Query: 219 PEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTS 278
PED++ FKKM+E G+ P+ V +++D CK +++A K+ MR++
Sbjct: 115 PEDSDEIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDK----------- 160
Query: 279 IIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKG 338
G P+V Y A + FC A ++ +A + +M + G
Sbjct: 161 ------------------------GTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNG 196
Query: 339 LNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMAL 398
+ PNA +Y + + Y N L + M+ G PN + + L+ + + VE A
Sbjct: 197 IAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQ 256
Query: 399 QLWGDMVEKGFG 410
+ +KGF
Sbjct: 257 SAIDTLNQKGFA 268
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 65/155 (41%), Gaps = 3/155 (1%)
Query: 289 PDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNL 348
P+ + ++ K+MKE G P+ A + C ++EA L M KG P Y
Sbjct: 115 PEDSDEIFKKMKEGGLIPNA---VAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTA 171
Query: 349 FFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKG 408
F ++ ++ + ++ +M G PN S L++ ++ A+ +M+E G
Sbjct: 172 VVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESG 231
Query: 409 FGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKG 443
L D LC + + +A+ + +KG
Sbjct: 232 HSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKG 266
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%)
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
++A F MR+ G P+VV Y ++V+ +CK ++E A ++ +M+ ++P+ +Y +
Sbjct: 148 QEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVL 207
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
+ GL D A EM E G P+VP + + C K + +A +D + KG
Sbjct: 208 VQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGF 267
Query: 340 NPNATTYNLF 349
N F
Sbjct: 268 AVNVKAVKEF 277
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 38/192 (19%)
Query: 219 PEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTS 278
PED++ FKKM+E G+ P+ V +++D CK +++A K+ MR++
Sbjct: 115 PEDSDEIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDK----------- 160
Query: 279 IIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKG 338
G P+V Y A + FC A ++ +A + +M + G
Sbjct: 161 ------------------------GTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNG 196
Query: 339 LNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMAL 398
+ PNA +Y + + Y N L + M+ G PN + + L+ + + VE A
Sbjct: 197 IAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQ 256
Query: 399 QLWGDMVEKGFG 410
+ +KGF
Sbjct: 257 SAIDTLNQKGFA 268
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 65/155 (41%), Gaps = 3/155 (1%)
Query: 289 PDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNL 348
P+ + ++ K+MKE G P+ A + C ++EA L M KG P Y
Sbjct: 115 PEDSDEIFKKMKEGGLIPNA---VAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTA 171
Query: 349 FFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKG 408
F ++ ++ + ++ +M G PN S L++ ++ A+ +M+E G
Sbjct: 172 VVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESG 231
Query: 409 FGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKG 443
L D LC + + +A+ + +KG
Sbjct: 232 HSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKG 266
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 139/349 (39%), Gaps = 78/349 (22%)
Query: 132 QTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDA 191
+ +T + VLAR V V+ K D D + + + R + + M +
Sbjct: 261 HSTVTYNAALRVLARPNSVAEFWSVVD---EMKTAGYDMDLDTYIKVSRQFQKSRMMAET 317
Query: 192 RNVY-HSLKHQFRPNLQTFNILL---SGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDV 247
+Y + + F+P++Q ++LL SG P D ++ F+ R+ T
Sbjct: 318 VKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNP-DLDLVFRVSRKYEST------------ 364
Query: 248 YCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPD 307
G+ L KA Y I L VG+ D+A ++ K M+ G PD
Sbjct: 365 ---GKSLSKA-----------------VYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPD 404
Query: 308 VPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYH 367
Y+ + C AKRL EA ++D+M ++G
Sbjct: 405 NITYSQLVFGLCKAKRLEEARGVLDQMEAQG----------------------------- 435
Query: 368 RMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMG 427
C P+ ++ LI+ K +++ AL + +M+EKGF + + DVL D
Sbjct: 436 ------CFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHN 489
Query: 428 KLGEAEKCFLEMIEKGQ-KPSNVSFR-RIKVLMELANRHEALQNLTQKM 474
K A +EM++ KP +++ I L+++ EAL +L Q M
Sbjct: 490 KFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEAL-DLLQMM 537
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 72/170 (42%), Gaps = 2/170 (1%)
Query: 311 YNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMM 370
YNAA+R + E + +VDEM + G + + TY R F S + + +Y MM
Sbjct: 266 YNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMM 325
Query: 371 GLGCHPNTQSCMFLIRLFKKQEK--VEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGK 428
P+ Q C L+R +++ ++ G V D + L +G+
Sbjct: 326 DGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGR 385
Query: 429 LGEAEKCFLEMIEKGQKPSNVSFRRIKVLMELANRHEALQNLTQKMAVFG 478
EAE+ M G +P N+++ ++ + A R E + + +M G
Sbjct: 386 FDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQG 435
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGW---KTPEDAEVFF 226
D ++ L+ LC+ K + +AR V ++ Q P+++T+ IL+ G + A F
Sbjct: 404 DNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACF 463
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEM-RERDLSPDVITYTSIIGGLGL 285
M E G D + L+D + + E A L EM + ++ P TY +I L
Sbjct: 464 ANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLK 523
Query: 286 VGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAK--RLREAYDLVDEMTSKGLNPNA 343
+ + ++A D+L+ MK+ + PAY A + +AK L +A +D ++SK +P+
Sbjct: 524 IKKSEEALDLLQMMKK----QNYPAYAEAFDGY-LAKFGTLEDAKKFLDVLSSKD-SPSF 577
Query: 344 TTYNLFFRIFYWSNDLQSSWNM 365
Y FY L + N+
Sbjct: 578 AAYFHVIEAFYREGRLTDAKNL 599
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 142/359 (39%), Gaps = 37/359 (10%)
Query: 132 QTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLR--TLCQEKSMT 189
Q + + + + + + ++ V + + + + T CFN ++R TL + S++
Sbjct: 39 QNSVFANVLFAITSISPSASASKEVVSYATSVFRFITNPSTFCFNTIIRICTLHEPSSLS 98
Query: 190 DARNVYHSLKHQFRPNLQTFNILLSGWKTPEDAEVFFKKMRE-----MGVTPDVVTYNSL 244
R + P+ TF + ++ ++ K G+ D+ T N+L
Sbjct: 99 SKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTL 158
Query: 245 VDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGC 304
+ VY ++ A ++ DE +RD V+TY +I GL KAR++++ + +
Sbjct: 159 IRVYSLIAPIDSALQLFDENPQRD----VVTYNVLIDGLV------KAREIVRARELFDS 208
Query: 305 YP--DVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSS 362
P D+ ++N+ I + REA L DEM + GL P+ S D Q
Sbjct: 209 MPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQK- 267
Query: 363 WNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSD-VLFD 421
G H T+ I F V+ + ++ + L SD LF
Sbjct: 268 --------GKAIHDYTKRKRLFIDSFLATGLVDFYAKC--GFIDTAMEIFELCSDKTLFT 317
Query: 422 ---LLCDMGKLGEAE---KCFLEMIEKGQKPSNVSFRRIKVLMELANRHEALQNLTQKM 474
++ + G E F +M+ G KP V+F + V + + +NL +M
Sbjct: 318 WNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQM 376
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 4/164 (2%)
Query: 219 PEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTS 278
P++ + F KMR G T + V + D K +A ++ ++++++ PDV+ +T+
Sbjct: 181 PKNLQEIFHKMRTEGFTNEAV---KMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTA 237
Query: 279 IIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCI-AKRLREAYDLVDEMTSK 337
I+ GQ + V M G P+ Y+ I+ K ++A + EM
Sbjct: 238 IVEAYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGN 297
Query: 338 GLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSC 381
G++PNA TY F F +S+ + M G G P+ ++
Sbjct: 298 GMSPNAATYTAVFEAFVREGKEESARELLQEMKGKGFVPDEKAV 341
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 1/132 (0%)
Query: 279 IIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKG 338
+ L G+ +A ++ ++K+ PDV A+ A + + A + +E + M + G
Sbjct: 203 MFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASG 262
Query: 339 LNPNATTYNLFFRIFYWSNDLQSSWNMY-HRMMGLGCHPNTQSCMFLIRLFKKQEKVEMA 397
++PNA TY++ + Y MMG G PN + + F ++ K E A
Sbjct: 263 VSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESA 322
Query: 398 LQLWGDMVEKGF 409
+L +M KGF
Sbjct: 323 RELLQEMKGKGF 334
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 75/158 (47%), Gaps = 5/158 (3%)
Query: 163 FKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFR-PNLQTFNILLSGWKTPED 221
F K+ + TN + L ++ +A ++ +K + R P++ ++ +
Sbjct: 188 FHKMRTEGFTNEAVKMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQ 247
Query: 222 AE---VFFKKMREMGVTPDVVTYNSLVD-VYCKGRELEKAYKVLDEMRERDLSPDVITYT 277
A+ F +M GV+P+ TY+ L+ + G+ + A K L EM +SP+ TYT
Sbjct: 248 AKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYT 307
Query: 278 SIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAI 315
++ G+ + AR++L+EMK G PD A A+
Sbjct: 308 AVFEAFVREGKEESARELLQEMKGKGFVPDEKAVREAL 345
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 137/312 (43%), Gaps = 58/312 (18%)
Query: 148 AKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQ 207
++C V + E + F L P+ D + ++ + M +AR ++ + R N+
Sbjct: 54 GELCKVGKIAEARKLFDGL-PERDVVTWTHVITGYIKLGDMREARELFDRVDS--RKNVV 110
Query: 208 TFNILLSGW---KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEM 264
T+ ++SG+ K AE+ F++M E +VV++N+++D Y + ++KA ++ DEM
Sbjct: 111 TWTAMVSGYLRSKQLSIAEMLFQEMPER----NVVSWNTMIDGYAQSGRIDKALELFDEM 166
Query: 265 RERDLSP---------------------------DVITYTSIIGGLGLVGQPDKARDVLK 297
ER++ DV+++T+++ GL G+ D+AR +
Sbjct: 167 PERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRL-- 224
Query: 298 EMKEYGCYPD--VPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYW 355
+ C P+ + ++NA I + R+ EA L M + ++N F
Sbjct: 225 ----FDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDF----ASWNTMITGFIR 276
Query: 356 SNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKG-----FG 410
+ ++ + ++ RM N S +I + + ++ E AL ++ M+ G G
Sbjct: 277 NREMNKACGLFDRM----PEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVG 332
Query: 411 SYTLVSDVLFDL 422
+Y + DL
Sbjct: 333 TYVSILSACSDL 344
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 132/317 (41%), Gaps = 23/317 (7%)
Query: 143 VLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSL-KHQ 201
++ + C + +++ R V + + +N+++R D +Y L +
Sbjct: 44 MVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKS 103
Query: 202 FR-PNLQTFNILLSGWKTPED---AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKA 257
F P+ TF + + + + + G VVT N+L+D+Y K +L A
Sbjct: 104 FELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDA 163
Query: 258 YKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRN 317
+KV DEM ER DVI++ S++ G +GQ KA+ + M + + ++ A I
Sbjct: 164 HKVFDEMYER----DVISWNSLLSGYARLGQMKKAKGLFHLMLD----KTIVSWTAMISG 215
Query: 318 FCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQ-SSW-NMYHRMMGLGCH 375
+ EA D EM G+ P+ + L+ W ++Y G
Sbjct: 216 YTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGF--L 273
Query: 376 PNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSY-TLVSDVLFDLLCDMGKLGEAEK 434
T C LI ++ K + A+QL+G M K S+ T++S + G A +
Sbjct: 274 KQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYH-----GNAHGAIE 328
Query: 435 CFLEMIEKGQKPSNVSF 451
F EM KP+ ++F
Sbjct: 329 TFNEMQRAKVKPNGITF 345
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 113/271 (41%), Gaps = 28/271 (10%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKTPEDAEVF----- 225
+ +C L+R + Q+ + D R ++ LLS +D+ F
Sbjct: 194 EVDCATELVRYMSQDSVIVDPR---------------LYSRLLSSVCKHKDSSCFDVIGY 238
Query: 226 FKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGL 285
+ +R+ +P + Y ++ +G ++ VL++M+ + PD++ YT ++ G+
Sbjct: 239 LEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIA 298
Query: 286 VGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATT 345
KA + E+ G PDV YN I C + A ++ M G PN T
Sbjct: 299 DEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVT 358
Query: 346 YNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMV 405
YN+ + + DL + ++ M G + N+ + +I + + ++V A L +
Sbjct: 359 YNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGL----L 414
Query: 406 EKGFGSYTLVS----DVLFDLLCDMGKLGEA 432
E+ F V + + LC+ G + +A
Sbjct: 415 EEAFNMNVFVKSSRIEEVISRLCEKGLMDQA 445
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 100/254 (39%), Gaps = 45/254 (17%)
Query: 223 EVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKV---------------------- 260
E+ K R MGV + T+ L+D C+ E++ A ++
Sbjct: 165 EILVKACR-MGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSS 223
Query: 261 ---------------LDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCY 305
L+++R+ SP + YT ++ L G+ + VL +MK
Sbjct: 224 VCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVE 283
Query: 306 PDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNM 365
PD+ Y ++ + +A L DE+ GL P+ TYN++ ND++ + M
Sbjct: 284 PDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKM 343
Query: 366 YHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLF----- 420
M LG PN + LI+ K + A LW +M G + D++
Sbjct: 344 MSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIE 403
Query: 421 --DLLCDMGKLGEA 432
+++C G L EA
Sbjct: 404 VDEVVCAHGLLEEA 417
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 100/468 (21%), Positives = 186/468 (39%), Gaps = 69/468 (14%)
Query: 62 LSNELIDQVLKRVRFSHANPSQTLEFYRYTGRR-KGFFHTAFSLDTMLYILGRSRMFNHI 120
L+ L+ Q+LK+ + NP L+ + R + H TM+ ILG+S N +
Sbjct: 10 LTPSLLSQILKKQK----NPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKS---NRV 62
Query: 121 WDL--LIEARWKDQTLITPRTVMVVLART-AKVCSVRQTVEFFRR--------------- 162
++ +IE R K+ + +V + RT ++ + + F+
Sbjct: 63 LEMKYVIE-RMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDT 121
Query: 163 -----------------FKKLVPDFDTN----CFNALLRTLCQEKSMTDARNVYHSLKHQ 201
F+K ++ N N L++ LCQ A V+ + +Q
Sbjct: 122 LLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQ 181
Query: 202 -FRPNLQTFNILLSGW----KTPEDAEVF---FKKMREMGVTPDVVTYNSLVDVYCKGRE 253
P+ ++ IL+ G+ K E + F ++ + G D+V Y L+D C E
Sbjct: 182 GCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGE 241
Query: 254 LEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQP--DKARDVLKEMKEYGCYPDVPAY 311
++ A ++L ++ + L Y I G ++ + +L E G P + +Y
Sbjct: 242 VDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSY 301
Query: 312 NAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMG 371
+A + +L E +++ M SKG P Y + + L+ + ++ ++ M
Sbjct: 302 SAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMM 361
Query: 372 LG-CHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSD-----VLFDLLCD 425
G C P LI+ K A+ M ++ + V++ L D LC
Sbjct: 362 QGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQ----VSCVANEETYQTLVDGLCR 417
Query: 426 MGKLGEAEKCFLEMIEKGQKPSNVSFR-RIKVLMELANRHEALQNLTQ 472
G+ EA + EM+ K P ++ IK L ++ R+EA+ L +
Sbjct: 418 DGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEE 465
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 118/271 (43%), Gaps = 24/271 (8%)
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDE-MRERDLSPDVITYTS 278
EDA FK + E +++++L+ K ELE A + + +++ +
Sbjct: 98 EDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNL 157
Query: 279 IIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREA----YDLVDEM 334
++ L V + D A V +EM GCYPD +Y ++ FC+ +L EA Y + +
Sbjct: 158 LMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRI 217
Query: 335 TSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLG------CHPNTQSCMFLIRLF 388
+ KG + Y + + ++ + + +++ G C+ + ++ +
Sbjct: 218 SQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHW----E 273
Query: 389 KKQEKVEMALQLWGDMVEKG----FGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQ 444
E +E +L + + +G SY+ ++ LF + GKL E E+ L M KG
Sbjct: 274 SSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLF----EEGKLVEGEEVLLAMRSKGF 329
Query: 445 KPSNVSF-RRIKVLMELANRHEALQNLTQKM 474
+P+ + ++K L EA+ + ++M
Sbjct: 330 EPTPFIYGAKVKALCRAGKLKEAVSVINKEM 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 83/187 (44%), Gaps = 8/187 (4%)
Query: 167 VPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNI----LLSGWKTPED 221
+P D+ ++A+ L +E + + V +++ + F P + L K E
Sbjct: 295 IPCLDS--YSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEA 352
Query: 222 AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEM-RERDLSPDVITYTSII 280
V K+M + P V YN L+ C + +A L +M ++ + TY +++
Sbjct: 353 VSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLV 412
Query: 281 GGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLN 340
GL GQ +A V++EM +P V Y+ I+ C R EA ++EM S+ +
Sbjct: 413 DGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMV 472
Query: 341 PNATTYN 347
P ++ +
Sbjct: 473 PESSVWK 479
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 100/468 (21%), Positives = 186/468 (39%), Gaps = 69/468 (14%)
Query: 62 LSNELIDQVLKRVRFSHANPSQTLEFYRYTGRR-KGFFHTAFSLDTMLYILGRSRMFNHI 120
L+ L+ Q+LK+ + NP L+ + R + H TM+ ILG+S N +
Sbjct: 10 LTPSLLSQILKKQK----NPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKS---NRV 62
Query: 121 WDL--LIEARWKDQTLITPRTVMVVLART-AKVCSVRQTVEFFRR--------------- 162
++ +IE R K+ + +V + RT ++ + + F+
Sbjct: 63 LEMKYVIE-RMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDT 121
Query: 163 -----------------FKKLVPDFDTN----CFNALLRTLCQEKSMTDARNVYHSLKHQ 201
F+K ++ N N L++ LCQ A V+ + +Q
Sbjct: 122 LLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQ 181
Query: 202 -FRPNLQTFNILLSGW----KTPEDAEVF---FKKMREMGVTPDVVTYNSLVDVYCKGRE 253
P+ ++ IL+ G+ K E + F ++ + G D+V Y L+D C E
Sbjct: 182 GCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGE 241
Query: 254 LEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQP--DKARDVLKEMKEYGCYPDVPAY 311
++ A ++L ++ + L Y I G ++ + +L E G P + +Y
Sbjct: 242 VDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSY 301
Query: 312 NAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMG 371
+A + +L E +++ M SKG P Y + + L+ + ++ ++ M
Sbjct: 302 SAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMM 361
Query: 372 LG-CHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSD-----VLFDLLCD 425
G C P LI+ K A+ M ++ + V++ L D LC
Sbjct: 362 QGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQ----VSCVANEETYQTLVDGLCR 417
Query: 426 MGKLGEAEKCFLEMIEKGQKPSNVSFR-RIKVLMELANRHEALQNLTQ 472
G+ EA + EM+ K P ++ IK L ++ R+EA+ L +
Sbjct: 418 DGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEE 465
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 118/271 (43%), Gaps = 24/271 (8%)
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDE-MRERDLSPDVITYTS 278
EDA FK + E +++++L+ K ELE A + + +++ +
Sbjct: 98 EDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNL 157
Query: 279 IIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREA----YDLVDEM 334
++ L V + D A V +EM GCYPD +Y ++ FC+ +L EA Y + +
Sbjct: 158 LMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRI 217
Query: 335 TSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLG------CHPNTQSCMFLIRLF 388
+ KG + Y + + ++ + + +++ G C+ + ++ +
Sbjct: 218 SQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHW----E 273
Query: 389 KKQEKVEMALQLWGDMVEKG----FGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQ 444
E +E +L + + +G SY+ ++ LF + GKL E E+ L M KG
Sbjct: 274 SSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLF----EEGKLVEGEEVLLAMRSKGF 329
Query: 445 KPSNVSF-RRIKVLMELANRHEALQNLTQKM 474
+P+ + ++K L EA+ + ++M
Sbjct: 330 EPTPFIYGAKVKALCRAGKLKEAVSVINKEM 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 83/187 (44%), Gaps = 8/187 (4%)
Query: 167 VPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNI----LLSGWKTPED 221
+P D+ ++A+ L +E + + V +++ + F P + L K E
Sbjct: 295 IPCLDS--YSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEA 352
Query: 222 AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEM-RERDLSPDVITYTSII 280
V K+M + P V YN L+ C + +A L +M ++ + TY +++
Sbjct: 353 VSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLV 412
Query: 281 GGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLN 340
GL GQ +A V++EM +P V Y+ I+ C R EA ++EM S+ +
Sbjct: 413 DGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMV 472
Query: 341 PNATTYN 347
P ++ +
Sbjct: 473 PESSVWK 479
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 104/222 (46%), Gaps = 14/222 (6%)
Query: 125 IEARW---KDQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRT 181
IE W + T + ++ V+L A+ S + ++FF R + + D N +A+L
Sbjct: 307 IEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGV 366
Query: 182 LCQEKSMTDARNVYHSL--KHQFRPNLQTFNILLSGWKTP---EDAEVFFKKMREMGVTP 236
+ S+ + + HSL K +F N N L++ + D++ F++M +
Sbjct: 367 SFIDNSLGLGKQL-HSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKR---- 421
Query: 237 DVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVL 296
+ V++NS++ + + A K+ +EM ++ P +T+ S++ VG DK R++L
Sbjct: 422 NYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELL 481
Query: 297 KEMKE-YGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSK 337
EMKE +G P Y I A L+EA +D + K
Sbjct: 482 NEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLK 523
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 128/308 (41%), Gaps = 27/308 (8%)
Query: 157 VEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNIL---- 212
V R+ + D D +N+++ Q +A V+ L + + TFN +
Sbjct: 236 VAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRL---VKNKVVTFNAITLST 292
Query: 213 ----LSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERD 268
+S + ++ MG+ DV+ S++D+YCK +E A K D M+ +
Sbjct: 293 VLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNK- 351
Query: 269 LSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAY 328
+V ++T++I G G+ G KA ++ M + G P+ + + + A E +
Sbjct: 352 ---NVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGW 408
Query: 329 DLVDEMTSK-GLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNT---QSCMFL 384
+ M + G+ P Y + + LQ ++++ RM P++ S +
Sbjct: 409 RWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMK---MKPDSIIWSSLLAA 465
Query: 385 IRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKG- 443
R+ K E E+++ ++ G Y L+S + D G+ + E+ + M +G
Sbjct: 466 CRIHKNVELAEISVARLFELDSSNCGYYMLLSHI----YADAGRWKDVERVRMIMKNRGL 521
Query: 444 QKPSNVSF 451
KP S
Sbjct: 522 VKPPGFSL 529
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 1/177 (0%)
Query: 225 FFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLG 284
K++ E + ++ N ++ + + R+++K +L EM+E + PDVITY S++ LG
Sbjct: 164 LLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILG 223
Query: 285 LVGQPDKARDVLKEMKE-YGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNA 343
G ++ VL MKE ++ YN + A R + +EM G+ P+
Sbjct: 224 RAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDL 283
Query: 344 TTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQL 400
+Y S +++ S ++ M P+ LI KK + ALQL
Sbjct: 284 LSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQL 340
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 113/287 (39%), Gaps = 10/287 (3%)
Query: 153 VRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNI 211
+++ V K++ D + L+ ++ +++ A ++ SL+ + + F
Sbjct: 54 LKKIVNHSESGSKIISKID---YTNLVEKFTRDGNLSGAYDLLQSLQEKNICLPISVFKN 110
Query: 212 LLSGWKTPEDAEVFFKKMREMGVTP-----DVVTYNSLVDVYCKGRELEKAYKVLDEMRE 266
LL+ D ++ + RE+ + P Y +L + + +L E+ E
Sbjct: 111 LLAAAGELNDMKLSCRVFREVLILPGKEPLSSDCYLNLARAFINTDDCTYLTSLLKEISE 170
Query: 267 RDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLRE 326
L +I II Q DK +LKEMKE+ C PDV YN+ + A + E
Sbjct: 171 SSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNE 230
Query: 327 AYDLVDEMTSK-GLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLI 385
++ M ++ N TYN + +Y+ M+ G P+ S +I
Sbjct: 231 ILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVI 290
Query: 386 RLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEA 432
+ V+ +L+L+ +M ++ V L D L G A
Sbjct: 291 DSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSA 337
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 85/172 (49%), Gaps = 8/172 (4%)
Query: 134 LITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARN 193
LI ++ A T ++ V ++ + ++ PD T +N++L L + + +
Sbjct: 177 LIVMNRIIFAFAETRQIDKVLMILKEMKEWE-CKPDVIT--YNSVLDILGRAGLVNEILG 233
Query: 194 VYHSLKH--QFRPNLQTFNILLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVDVY 248
V ++K N+ T+N +L+G + + V + +M + G+ PD+++Y +++D
Sbjct: 234 VLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSL 293
Query: 249 CKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMK 300
+ ++++ ++ DEM++R + P V Y ++I L G A + E+K
Sbjct: 294 GRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDELK 345
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 4/138 (2%)
Query: 201 QFRPNLQTFN----ILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEK 256
+ +P++ T+N IL E V + V+ +++TYN++++ K +
Sbjct: 207 ECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDM 266
Query: 257 AYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIR 316
+ +EM + + PD+++YT++I LG G ++ + EMK+ P V Y A I
Sbjct: 267 CLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALID 326
Query: 317 NFCIAKRLREAYDLVDEM 334
+ + A L DE+
Sbjct: 327 CLKKSGDFQSALQLSDEL 344
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 172 TNC-FNALLRTLCQEKSMTDARNVYH-SLKHQFRPNLQTFNILLSGWKTPED---AEVFF 226
T+C A++ +++ +A VY ++K + T+ I ++ + E AE+ F
Sbjct: 352 TDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLF 411
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
+M + G VV Y++++D+Y K R L A +++ +M++R P++ Y S+I G
Sbjct: 412 DEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRA 471
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDE 333
+A + KEMK PD +Y + I + +K L +L E
Sbjct: 472 MDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQE 518
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 77/170 (45%)
Query: 239 VTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKE 298
VTY ++ YC+ + KA + DEM ++ V+ Y++I+ G + A ++ +
Sbjct: 389 VTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAK 448
Query: 299 MKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSND 358
MK+ GC P++ YN+ I A LR A + EM + P+ +Y + S +
Sbjct: 449 MKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKE 508
Query: 359 LQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKG 408
L+ +Y + ++ +F K +++ ++L DM +G
Sbjct: 509 LERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEG 558
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 62/127 (48%)
Query: 221 DAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSII 280
DA KM++ G P++ YNSL+D++ + +L +A K+ EM+ + PD ++YTS+I
Sbjct: 441 DAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMI 500
Query: 281 GGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLN 340
+ ++ ++ +E + D + F R+ E L+ +M +G
Sbjct: 501 SAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTR 560
Query: 341 PNATTYN 347
+A Y+
Sbjct: 561 LDARLYS 567
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/277 (19%), Positives = 109/277 (39%), Gaps = 8/277 (2%)
Query: 136 TPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDF----DTNCFNALLRTLCQEKSMTDA 191
+P ++ K+ + VE F+ FK F + + + +L + +A
Sbjct: 208 SPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLAKESGSIYTIVCSSLAKSGRAFEA 267
Query: 192 RNVYHSLKHQFRP-NLQTFNILLSGWKTPEDAEVFFKKMREMG---VTPDVVTYNSLVDV 247
V +K + P + + +++L+ + + + K +E G + D +V +
Sbjct: 268 LEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLM 327
Query: 248 YCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPD 307
Y + +E +V+ MR+ +L +I+ G +A V + + C
Sbjct: 328 YVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAG 387
Query: 308 VPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYH 367
Y AI +C ++ +A L DEM KG + Y+ ++ + L + +
Sbjct: 388 QVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMA 447
Query: 368 RMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDM 404
+M GC PN LI + + + A ++W +M
Sbjct: 448 KMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEM 484
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 80/173 (46%), Gaps = 2/173 (1%)
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
E+ VT ++ ++V+ + K R +A KV + + + +TY I + + +
Sbjct: 348 ELKVTDCILC--AIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYN 405
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFF 350
KA + EM + G V AY+ + + +RL +A L+ +M +G PN YN
Sbjct: 406 KAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLI 465
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGD 403
+ + DL+ + ++ M P+ S +I + + +++E ++L+ +
Sbjct: 466 DMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQE 518
>AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2435007-2439344 REVERSE
LENGTH=821
Length = 821
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 104/238 (43%), Gaps = 43/238 (18%)
Query: 171 DTNCFNALLRTLCQEKSMTDARNVYHSLKH-QFRPNLQTFNILLSGW---KTPEDAEVFF 226
+T F +++R + K A N+ +LK+ PN FN +L+G+ K A +
Sbjct: 442 NTENFRSIIRLCTRIKDFEGAYNMLGNLKNFNLEPNSSMFNCILAGYFREKNVSSALMVV 501
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
K+M+E GV PD +T+ L++ + + K Y +EM++ + Y S+I
Sbjct: 502 KQMKEAGVKPDSITFGYLINNCTQEDAITKYY---EEMKQAGVQATKRIYMSLIDAYAAS 558
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTY 346
G+ +KA+ VL + PDVPA N L+ L+ + S+G
Sbjct: 559 GKFEKAKQVLVD-------PDVPAIN--------QNELKSV--LISALASRG-------- 593
Query: 347 NLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDM 404
W++ L ++Y M CH + +S + LI + ++ +QL D+
Sbjct: 594 -------KWADAL----HIYEEMRKAECHVDPKSIISLIEYSDSKGELSTLVQLADDL 640
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 96/222 (43%), Gaps = 4/222 (1%)
Query: 218 TPEDAEVFFKKM-REMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITY 276
T ED + F KM E+ V P +Y LV C E+ A V+++M E L
Sbjct: 352 TVEDTILKFNKMHEELDVMPSSTSYEKLVKYSCDSNEVVTALDVVEKMGEAGLMISADIL 411
Query: 277 TSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTS 336
S++ + V + D R + M P+ + + IR K AY+++ + +
Sbjct: 412 HSLLHAIDEVLEFDLVRRIHSIMCTKSVKPNTENFRSIIRLCTRIKDFEGAYNMLGNLKN 471
Query: 337 KGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEM 396
L PN++ +N ++ ++ S+ + +M G P++ + +LI +++ +
Sbjct: 472 FNLEPNSSMFNCILAGYFREKNVSSALMVVKQMKEAGVKPDSITFGYLINNCTQEDAI-- 529
Query: 397 ALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLE 438
+ + +M + G + + L D GK +A++ ++
Sbjct: 530 -TKYYEEMKQAGVQATKRIYMSLIDAYAASGKFEKAKQVLVD 570
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 101/257 (39%), Gaps = 17/257 (6%)
Query: 158 EFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQF-RPN-------LQTF 209
E ++R ++ + + N L+ + + K A +Y L + PN + F
Sbjct: 367 ELYKRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHF 426
Query: 210 NILLSG------WKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDE 263
NILLS W+ KM + G+ P +N+++ K E A ++
Sbjct: 427 NILLSAASKRGIWRW---GVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKA 483
Query: 264 MRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKR 323
M + P VI+Y +++ L D+A V M + G P++ AY ++
Sbjct: 484 MVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQK 543
Query: 324 LREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMF 383
L+ EM SKG+ P+ T+N + ++ +HRM PN +
Sbjct: 544 FNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEM 603
Query: 384 LIRLFKKQEKVEMALQL 400
LI K +A +L
Sbjct: 604 LIEALANDAKPRLAYEL 620
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSLKHQ-------FRPNLQTFNILLSGWKTPEDAEVFFK 227
F A+++ ++K + A V LK + PNL +N LL + +AE K
Sbjct: 149 FCAMIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNSLLGAMRGFGEAEKILK 208
Query: 228 KMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSII 280
M E G+ P++VTYN+L+ +Y + E KA +LD +E+ P+ ITY++ +
Sbjct: 209 DMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYSTAL 261
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 80/176 (45%), Gaps = 13/176 (7%)
Query: 184 QEKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNS 243
+E S D + K+ R +++ L KT +D + K E+ + + +
Sbjct: 96 EEVSTEDLSSANGGEKNNLRVDVRELAFSLRAAKTADDVDAVLKDKGELPLQ----VFCA 151
Query: 244 LVDVYCKGRELEKAYKVLDEMRERD------LSPDVITYTSIIGGLGLVGQPDKARDVLK 297
++ + K + L+ A V+D ++ + + P++ Y S++G + G+ +K +LK
Sbjct: 152 MIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNSLLGAMRGFGEAEK---ILK 208
Query: 298 EMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIF 353
+M+E G P++ YN + + +A ++D KG PN TY+ ++
Sbjct: 209 DMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYSTALLVY 264
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 79/177 (44%), Gaps = 4/177 (2%)
Query: 175 FNALLRTLCQEKSMTDARNVYHSL-KHQFRPNLQTFNILLSGW---KTPEDAEVFFKKMR 230
+NA+L + T A ++ ++ + +P + ++ LLS K ++A + M
Sbjct: 461 WNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMI 520
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
++G+ P++ Y ++ V ++ +L EM + + P V+T+ ++I G G
Sbjct: 521 KVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSG 580
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYN 347
A + MK P+ Y I + R AY+L + ++GL ++ Y+
Sbjct: 581 VAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSSKPYD 637
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 79/176 (44%), Gaps = 8/176 (4%)
Query: 150 VCS-VRQTVEFFRRFKKLVPDFDTN---CFNALLRTLCQEKSMTDARNVY-HSLKHQFRP 204
CS +T + FK +V + + + ALL L + K +A V+ H +K P
Sbjct: 467 ACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEP 526
Query: 205 NLQTFNIL---LSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVL 261
NL + + L+G + + K+M G+ P VVT+N+++ + AY+
Sbjct: 527 NLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWF 586
Query: 262 DEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRN 317
M+ ++ P+ ITY +I L +P A ++ + + G Y+A +++
Sbjct: 587 HRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVVKS 642
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 101/247 (40%), Gaps = 44/247 (17%)
Query: 231 EMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPD 290
++G D T N LV Y K +E+ A K+ DEM E P+V+++TS+I G +G+P
Sbjct: 57 KLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCE----PNVVSWTSVISGYNDMGKPQ 112
Query: 291 KARDVLKEMKEYGCYPDVPAYNAAIRNFCIA-KRLREAYDLVDEMTSKGLNPNATTYNLF 349
A + ++M E P A++ C A R ++ + GL N +
Sbjct: 113 NALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSL 172
Query: 350 FRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQL--------- 400
++ ND++++ ++ M+G G N S +I + + + A++L
Sbjct: 173 VDMYGKCNDVETARRVFDSMIGYG--RNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 401 -----------------------WGDMVE-----KGFGSYTLVSDVLFDLLCDMGKLGEA 432
WG + G+ S T+V+ L D+ G L A
Sbjct: 231 SDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCA 290
Query: 433 EKCFLEM 439
EK FL +
Sbjct: 291 EKIFLRI 297
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/346 (19%), Positives = 135/346 (39%), Gaps = 50/346 (14%)
Query: 94 RKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSV 153
R GF F + ++ + + R + ++T+++ ++ A+ +
Sbjct: 147 RLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEP--- 203
Query: 154 RQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHS---LKHQFRPNLQ-TF 209
+ +E F + +K+ D ++L + + R+++ S + + P+L +
Sbjct: 204 MEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISL 263
Query: 210 NILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDL 269
N + + A++ F KM+ +P+++ +N+++ Y K +A + EM +D+
Sbjct: 264 NTMYAKCGQVATAKILFDKMK----SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDV 319
Query: 270 SPDVITYTSIIGGLGLVGQPDKARDVLKEMKEY---------------------GCYP-- 306
PD I+ TS I VG ++AR M EY C
Sbjct: 320 RPDTISITSAISACAQVGSLEQAR----SMYEYVGRSDYRDDVFISSALIDMFAKCGSVE 375
Query: 307 ------------DVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFY 354
DV ++A I + + R REA L M G++PN T+
Sbjct: 376 GARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACN 435
Query: 355 WSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQL 400
S ++ W ++RM +P Q +I L + ++ A ++
Sbjct: 436 HSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEV 481
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/323 (18%), Positives = 123/323 (38%), Gaps = 41/323 (12%)
Query: 157 VEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLK-HQFRPNLQTFNILL-- 213
+ F R+ +P +NA++R + DA +Y +++ + P+ TF LL
Sbjct: 69 ITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKA 128
Query: 214 -SGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLD--EMRERDLS 270
SG + ++ +G DV N L+ +Y K R L A V + + ER
Sbjct: 129 CSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERT-- 186
Query: 271 PDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDL 330
++++T+I+ G+P +A ++ +M++ PD A + + F + L++ +
Sbjct: 187 --IVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSI 244
Query: 331 VDEMTSKGL-------------------------------NPNATTYNLFFRIFYWSNDL 359
+ GL +PN +N + +
Sbjct: 245 HASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYA 304
Query: 360 QSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVL 419
+ + +M+H M+ P+T S I + +E A ++ + + +S L
Sbjct: 305 REAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSAL 364
Query: 420 FDLLCDMGKLGEAEKCFLEMIEK 442
D+ G + A F +++
Sbjct: 365 IDMFAKCGSVEGARLVFDRTLDR 387
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 138/343 (40%), Gaps = 76/343 (22%)
Query: 161 RRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGW---K 217
R +++P+ D +N +L Q + DAR+V+ + + N ++N LLS +
Sbjct: 146 RELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK---NDVSWNALLSAYVQNS 202
Query: 218 TPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYT 277
E+A + FK + V++N L+ + K +++ +A + D M R DV+++
Sbjct: 203 KMEEACMLFKSRENWAL----VSWNCLLGGFVKKKKIVEARQFFDSMNVR----DVVSWN 254
Query: 278 SIIGGLGLVGQPDKARDVLKE--------------------MKEYG--CYPDVP-----A 310
+II G G+ D+AR + E M E + +P +
Sbjct: 255 TIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVS 314
Query: 311 YNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRM- 369
+NA + + +R+ A +L D M + N +T+N + + + N++ +M
Sbjct: 315 WNAMLAGYVQGERMEMAKELFDVMPCR----NVSTWNTMITGYAQCGKISEAKNLFDKMP 370
Query: 370 --------MGLGCHPNTQSCMFLIRLFKKQEK----------------------VEMALQ 399
+ + + +RLF + E+ +E+ Q
Sbjct: 371 KRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQ 430
Query: 400 LWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEK 442
L G +V+ G+ + V + L + C G + EA F EM K
Sbjct: 431 LHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK 473
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 85/181 (46%), Gaps = 3/181 (1%)
Query: 222 AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIG 281
E +F + E T +TY SL++ YCK EKA +L++M+E +++P ++Y S++
Sbjct: 109 GENYFVDLPETSKTE--LTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMT 166
Query: 282 GLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKG-LN 340
G+ +K +++E+K PD YN +R + +++EM G +
Sbjct: 167 LYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVA 226
Query: 341 PNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQL 400
P+ TTY+ I+ + Q + + + + FLI L+ + K+ ++
Sbjct: 227 PDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRI 286
Query: 401 W 401
W
Sbjct: 287 W 287
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 1/135 (0%)
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
E AE KM+E+ +TP ++YNSL+ +Y K E EK ++ E++ ++ PD TY
Sbjct: 140 EKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVW 199
Query: 280 IGGLGLVGQPDKARDVLKEMKEYG-CYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKG 338
+ L V++EM G PD Y+ + A ++A + E+ K
Sbjct: 200 MRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKN 259
Query: 339 LNPNATTYNLFFRIF 353
+ T Y ++
Sbjct: 260 TQRDFTAYQFLITLY 274
>AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1918242-1919273 REVERSE
LENGTH=343
Length = 343
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 61/111 (54%), Gaps = 2/111 (1%)
Query: 233 GVTPDVVTYNSLVDVYCKGRELEKAYK-VLDEMRERDLSPDVITYTSIIGGLGLVGQPDK 291
G P+ T+ L D + + R ++ +++EM+ SPD T ++ L V + D+
Sbjct: 130 GCLPNPQTHLLLSDAWLERRRGSQSVADIINEMKLIGYSPDTGTCNYLVSSLCAVDKLDE 189
Query: 292 ARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSK-GLNP 341
A V++EM GC PDV +Y A I + C+A++ + +V EM SK G++P
Sbjct: 190 AIKVVEEMSAAGCIPDVESYGAVINSLCLARKTTDVVKIVKEMVSKAGISP 240
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Query: 196 HSLKHQFRPNLQTFNILLSGW----KTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKG 251
+L+ PN QT +L W + + +M+ +G +PD T N LV C
Sbjct: 125 RTLRSGCLPNPQTHLLLSDAWLERRRGSQSVADIINEMKLIGYSPDTGTCNYLVSSLCAV 184
Query: 252 RELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEM 299
+L++A KV++EM PDV +Y ++I L L + ++KEM
Sbjct: 185 DKLDEAIKVVEEMSAAGCIPDVESYGAVINSLCLARKTTDVVKIVKEM 232
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 142/321 (44%), Gaps = 38/321 (11%)
Query: 131 DQTLITPRTVMVVLARTAKVCSVRQTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKS-MT 189
DQ I P + ++AR + + + F + +T +N+LL + ++ S M
Sbjct: 57 DQDQIFP--LNKIIARCVRSGDIDGALRVFHGMRAK----NTITWNSLLIGISKDPSRMM 110
Query: 190 DARNVYHSLKHQFRPNLQTFNILLSGWKTP---EDAEVFFKKMREMGVTPDVVTYNSLVD 246
+A ++ + P+ ++NI+LS + E A+ FF +M D ++N+++
Sbjct: 111 EAHQLFDEIP---EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMP----FKDAASWNTMIT 163
Query: 247 VYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYP 306
Y + E+EKA ++ M E++ +++ ++I G G +KA K G
Sbjct: 164 GYARRGEMEKARELFYSMMEKN----EVSWNAMISGYIECGDLEKASHFFKVAPVRG--- 216
Query: 307 DVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMY 366
V A+ A I + AK++ A + +MT +N N T+N + ++ + ++
Sbjct: 217 -VVAWTAMITGYMKAKKVELAEAMFKDMT---VNKNLVTWNAMISGYVENSRPEDGLKLF 272
Query: 367 HRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDV-----LFD 421
M+ G PN+ + + ALQL G + + TL +DV L
Sbjct: 273 RAMLEEGIRPNSSGLSSALLGCSELS----ALQL-GRQIHQIVSKSTLCNDVTALTSLIS 327
Query: 422 LLCDMGKLGEAEKCFLEMIEK 442
+ C G+LG+A K F M +K
Sbjct: 328 MYCKCGELGDAWKLFEVMKKK 348
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4962293-4965976 FORWARD
LENGTH=1227
Length = 1227
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 60/120 (50%)
Query: 220 EDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSI 279
E A V+ +++ +G D VT+ L+ C ++++A L E+ + PDV +Y +I
Sbjct: 340 ERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAI 399
Query: 280 IGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL 339
+ GL G +L EMKE G + + + +C A++ EA +V++M GL
Sbjct: 400 LSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEAKRIVNKMFGYGL 459
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/345 (20%), Positives = 132/345 (38%), Gaps = 44/345 (12%)
Query: 71 LKRVRFSHANPSQTLEFYRYTG-RRKGFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARW 129
L+R + E +R+ + +GF H + + M +L R M + LL+E
Sbjct: 116 LQRGGIGNIKVQALWEIFRWASVQYQGFKHLPQACEIMASMLIREGMVKEVELLLMEMER 175
Query: 130 KDQTLITPRTVMVVLARTAKVCSVRQTVEFF--RRFKKLVPDFDTNCFNALL-------R 180
T++ ++ + R+ V F R K LVP T+C+ L+ R
Sbjct: 176 HGDTMVNEGIFCDLIGKYVDDFDSRKAVMLFDWMRRKGLVPL--TSCYQILIDQLVRVHR 233
Query: 181 T-------------------------------LCQEKSMTDARNVYHSL-KHQFRPNLQT 208
T LC ++ + +AR + L N
Sbjct: 234 TESAYRICLDWVETRAELNHMNIDSIGKVIELLCLDQKVQEARVLARKLVALGCILNSSI 293
Query: 209 FNILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERD 268
++ + G+ +D E + E+ PDV N ++ C+ E+AY ++E+
Sbjct: 294 YSKITIGYNEKQDFEDLLSFIGEVKYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLG 353
Query: 269 LSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAY 328
D +T+ +IG G +A L E+ G PDV +YNA + + +
Sbjct: 354 FKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTH 413
Query: 329 DLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLG 373
++DEM G+ + +T+ + + + + + + ++M G G
Sbjct: 414 CILDEMKENGMMLSLSTFKIMVTGYCKARQFEEAKRIVNKMFGYG 458
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 212 LLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSP 271
L+S + P+ + + R + P+ Y++++ L+ A +L+ M + P
Sbjct: 1025 LISKGEIPKAEDFLTRVTRNGMMAPN---YDNIIKKLSDRGNLDIAVHLLNTMLKNQSIP 1081
Query: 272 DVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLV 331
+Y S+I GL Q DKA D EM E G P + ++ + FC A ++ E+ L+
Sbjct: 1082 GSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLI 1141
Query: 332 DEMTSKGLNPNATTY 346
M G +P+ +
Sbjct: 1142 KSMVGLGESPSQEMF 1156
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 114/288 (39%), Gaps = 8/288 (2%)
Query: 164 KKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKTPEDAE 223
KK +P + C L+ LC+ A N+ + + + L+G DAE
Sbjct: 768 KKHIPSLGS-CL-MLIPRLCRANKAGTAFNLAEQIDSSYVHYALIKGLSLAG--KMLDAE 823
Query: 224 VFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGL 283
+ M G++ YN + YCKG K +VL M +++ V +Y + +
Sbjct: 824 NQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKM 883
Query: 284 GLVGQPDKARDVLKEMKEYG-CYPD-VPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNP 341
L Q A LKE G P V YN I AK E ++ EM +G+ P
Sbjct: 884 CLEPQSLSAIS-LKEFLLLGESNPGGVIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLP 942
Query: 342 NATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLW 401
+ TT+N + S D SS M+ G PN +S + V+ AL LW
Sbjct: 943 DETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLW 1002
Query: 402 GDMVEKGFG-SYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSN 448
M KG+ ++V + + L G++ +AE + G N
Sbjct: 1003 QVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAPN 1050
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/363 (19%), Positives = 140/363 (38%), Gaps = 65/363 (17%)
Query: 117 FNHIWDLLIEARWKDQTLITPRTVMVVLARTAKVCSVRQTVEFFRR------------FK 164
+N I++++ + K + V+ ++ R +CSV+ E+ R+ K
Sbjct: 837 YNKIYNVMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLK 896
Query: 165 KLVPDFDTN-----CFNALLRTLCQEKSMTDARNVYHSLKHQFR---PNLQTFNILLSGW 216
+ + ++N +N L+ + + K+ + V L+ Q R P+ TFN L+ G+
Sbjct: 897 EFLLLGESNPGGVIIYNMLIFYMFRAKNHLEVNKVL--LEMQGRGVLPDETTFNFLVHGY 954
Query: 217 KTPEDAEVFFKKMREM---GVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRER--DLSP 271
+ D + + M G+ P+ + ++ C +++KA + M + +L
Sbjct: 955 SSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGS 1014
Query: 272 DVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLV 331
V+ T I+ L G+ KA D L + G P Y+ I+ L A L+
Sbjct: 1015 SVVQ-TKIVETLISKGEIPKAEDFLTRVTRNGMMA--PNYDNIIKKLSDRGNLDIAVHLL 1071
Query: 332 DEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQ 391
+ M P +++Y+ N L + + + M+ LG P+ +
Sbjct: 1072 NTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSIST----------- 1120
Query: 392 EKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEKGQKPSNVSF 451
W +V K C+ ++ E+E+ M+ G+ PS F
Sbjct: 1121 ---------WSGLVHK---------------FCEACQVLESERLIKSMVGLGESPSQEMF 1156
Query: 452 RRI 454
+ +
Sbjct: 1157 KTV 1159
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 6/171 (3%)
Query: 160 FRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILLSGWKT 218
FR F + T ++A++ Q + ++DA ++ ++ + PN+ T N LL +
Sbjct: 374 FRVFSG-ASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAA 432
Query: 219 PED---AEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVIT 275
D A + + G + LV VY K LE A+K+ + ++E+ S DV+
Sbjct: 433 LADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVL 492
Query: 276 YTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLRE 326
+ ++I G G+ G A V EM G P+ + +A+ N C L E
Sbjct: 493 WGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSAL-NACSHSGLVE 542
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 125/310 (40%), Gaps = 16/310 (5%)
Query: 150 VCSVRQTVEFFRRFKKLVPDF----DTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPN 205
VC + +E R KLV + NAL+ + M +AR V+ ++ R +
Sbjct: 227 VCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME---RRD 283
Query: 206 LQTFNILLSGWKTPEDAEVFFKKMREM---GVTPDVVTYNSLVDVYCKGRELEKAYKVLD 262
+ T+ +++G+ D E + R M GV P+ VT SLV V ++ +
Sbjct: 284 VITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHG 343
Query: 263 EMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAK 322
+ + D+I TS+I + D V +Y P +AI C+
Sbjct: 344 WAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGP-----WSAIIAGCVQN 398
Query: 323 RL-REAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSC 381
L +A L M + + PN T N + DL+ + N++ + G + +
Sbjct: 399 ELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAA 458
Query: 382 MFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIE 441
L+ ++ K +E A +++ + EK ++ L G A + F+EM+
Sbjct: 459 TGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVR 518
Query: 442 KGQKPSNVSF 451
G P+ ++F
Sbjct: 519 SGVTPNEITF 528
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 132/291 (45%), Gaps = 24/291 (8%)
Query: 167 VPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKTPED----A 222
+P D+ +N+++ + + AR ++ + + + NL ++N ++SG+ D A
Sbjct: 182 MPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMK-NLISWNSMISGYAQTSDGVDIA 240
Query: 223 EVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGG 282
F M E D++++NS++D Y K +E A + D M R DV+T+ ++I G
Sbjct: 241 SKLFADMPE----KDLISWNSMIDGYVKHGRIEDAKGLFDVMPRR----DVVTWATMIDG 292
Query: 283 LGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKG-LNP 341
+G A+ + +M + DV AYN+ + + K EA ++ +M + L P
Sbjct: 293 YAKLGFVHHAKTLFDQMP----HRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLP 348
Query: 342 NATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLW 401
+ TT + L + +M+ ++ + + + LI ++ K ++ A+ ++
Sbjct: 349 DDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVF 408
Query: 402 GDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEK-GQKPSNVSF 451
+ K + + L + LGE+ L IE+ KP +++F
Sbjct: 409 EGIENKSIDHWNAMIGGL-----AIHGLGESAFDMLLQIERLSLKPDDITF 454
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 14/217 (6%)
Query: 196 HSLKHQFRPNLQTFNILL---SGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGR 252
+S+K F N L+ S + EDA+ F+++ TPDVV++N LV
Sbjct: 553 YSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEI----ATPDVVSWNGLVSGLASNG 608
Query: 253 ELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKE-YGCYPDVPAY 311
+ A +EMR ++ PD +T+ ++ D + + MK+ Y P V Y
Sbjct: 609 FISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHY 668
Query: 312 NAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMG 371
+ A RL EA +V+ M L PNA + R + +L +M ++ G
Sbjct: 669 VHLVGILGRAGRLEEATGVVETMH---LKPNAMIFKTLLRACRYRGNLSLGEDMANK--G 723
Query: 372 LGCHPNTQSCMFLIR-LFKKQEKVEMALQLWGDMVEK 407
L P+ + L+ L+ + K E+A + M EK
Sbjct: 724 LALAPSDPALYILLADLYDESGKPELAQKTRNLMTEK 760
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 102/228 (44%), Gaps = 14/228 (6%)
Query: 232 MGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDK 291
+G V N+L+D+Y K ++ A + MR RD V+++TS+I G+ GQ +K
Sbjct: 267 LGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRD----VVSWTSLIVGMAQHGQAEK 322
Query: 292 ARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSK-GLNPNATTYNLFF 350
A + +M +G P+ + I + + +L MT G+ P+ Y
Sbjct: 323 ALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLL 382
Query: 351 RIFYWSNDLQSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE---- 406
+ S L + N+ H M P+ + L+ K+Q + +M +++ +V
Sbjct: 383 DLLGRSGLLDEAENLIHTM---PFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKL 439
Query: 407 KGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEM-IEKGQKPSNVSFRR 453
K +Y L+S++ + GK+ EA + EM + K S+V R+
Sbjct: 440 KDPSTYILLSNI-YASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRK 486
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 106/251 (42%), Gaps = 20/251 (7%)
Query: 204 PNLQTFNILLSG----WKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYK 259
PN +FN ++ G W E A +++M+ G+ PD TYN + K E+
Sbjct: 94 PNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRS 153
Query: 260 VLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFC 319
V + + L DV S+I GQ AR + E+ E D ++N+ I +
Sbjct: 154 VHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITE----RDTVSWNSMISGYS 209
Query: 320 IAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYH----RMMGLGCH 375
A ++A DL +M +G P+ T DL++ + + +GL
Sbjct: 210 EAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTF 269
Query: 376 PNTQSCMFLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKC 435
++ LI ++ K ++ A +++ M++K ++T + + GK EA K
Sbjct: 270 LGSK----LISMYGKCGDLDSARRVFNQMIKKDRVAWT----AMITVYSQNGKSSEAFKL 321
Query: 436 FLEMIEKGQKP 446
F EM + G P
Sbjct: 322 FFEMEKTGVSP 332
>AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=550
Length = 550
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 116/276 (42%), Gaps = 42/276 (15%)
Query: 178 LLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKTP-----------EDAEVFF 226
L+R + + M ++RN+ + RP ++T++IL E F
Sbjct: 158 LIRAVNIFRHMVNSRNL------ECRPTMRTYHILFKALLGRGNNSFINHLYMETVRSLF 211
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
++M + G+ PDV N LV KGR + ++L EM+ + P+ +Y S++ L
Sbjct: 212 RQMVDSGIEPDVFALNCLV----KGRTI-NTRELLSEMKGKGFVPNGKSYNSLVNAFALS 266
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL-----NP 341
G+ D A L EM E G D +Y + C + EA L++ + K L +
Sbjct: 267 GEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLVDIDSDD 326
Query: 342 NATTYNLFFRIFYWSNDL-----QSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEM 396
Y + + +S+ L +S + + + LGC + L+RLF +VE
Sbjct: 327 KLKMYQMVILVLLFSSMLPSVCDESRYMIVRNVPALGCGDD------LMRLFMTYGEVEE 380
Query: 397 ALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEA 432
M + +T V + F L+ + KL E+
Sbjct: 381 C----KPMDAEDCAEFTDVYWIKFRLITNARKLDES 412
>AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=575
Length = 575
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 116/276 (42%), Gaps = 42/276 (15%)
Query: 178 LLRTLCQEKSMTDARNVYHSLKHQFRPNLQTFNILLSGWKTP-----------EDAEVFF 226
L+R + + M ++RN+ + RP ++T++IL E F
Sbjct: 183 LIRAVNIFRHMVNSRNL------ECRPTMRTYHILFKALLGRGNNSFINHLYMETVRSLF 236
Query: 227 KKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLV 286
++M + G+ PDV N LV KGR + ++L EM+ + P+ +Y S++ L
Sbjct: 237 RQMVDSGIEPDVFALNCLV----KGRTI-NTRELLSEMKGKGFVPNGKSYNSLVNAFALS 291
Query: 287 GQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGL-----NP 341
G+ D A L EM E G D +Y + C + EA L++ + K L +
Sbjct: 292 GEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLVDIDSDD 351
Query: 342 NATTYNLFFRIFYWSNDL-----QSSWNMYHRMMGLGCHPNTQSCMFLIRLFKKQEKVEM 396
Y + + +S+ L +S + + + LGC + L+RLF +VE
Sbjct: 352 KLKMYQMVILVLLFSSMLPSVCDESRYMIVRNVPALGCGDD------LMRLFMTYGEVEE 405
Query: 397 ALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEA 432
M + +T V + F L+ + KL E+
Sbjct: 406 C----KPMDAEDCAEFTDVYWIKFRLITNARKLDES 437
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 104/235 (44%), Gaps = 30/235 (12%)
Query: 188 MTDARNVYHSLKHQFRPNLQTFNILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDV 247
M ARN + + H+ ++ L+SG+ + ++ K +M DVV YN+++D
Sbjct: 129 MGCARNAFDEMPHRSEV---SWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDG 185
Query: 248 YCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPD 307
+ K ++ A ++ DEM + VIT+T++I G + D AR + M E +
Sbjct: 186 FVKSGDMTSARRLFDEMTHK----TVITWTTMIHGYCNIKDIDAARKLFDAMPE----RN 237
Query: 308 VPAYNAAIRNFCIAKRLREAYDLVDEM-TSKGLNPNATTYNLFFRIFYWSNDLQSSWNMY 366
+ ++N I +C K+ +E L EM + L+P+ T + L
Sbjct: 238 LVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALS------ 291
Query: 367 HRMMGLGCHPNTQS---------CMFLIRLFKKQEKVEMALQLWGDMVEKGFGSY 412
+G CH Q C ++ ++ K ++E A +++ +M EK S+
Sbjct: 292 ---LGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASW 343
>AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8183594-8185180 REVERSE
LENGTH=501
Length = 501
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 77/191 (40%), Gaps = 51/191 (26%)
Query: 157 VEFFR---RFKKLVPDFDT-----------NCFNALLRTLCQEKSMTDARNVYHSL--KH 200
+ F R R +++P FDT N + ++R LC+EKSM++A + S+ H
Sbjct: 102 IRFLRQSSRLHEILPVFDTWKNLEPSRISENNYERIIRFLCEEKSMSEAIRAFRSMIDDH 161
Query: 201 QFRPNLQTFNILLSGWKTPEDAEVFFKKMREMGVTPDVVTYNSLVDVYCKGRELEKAYKV 260
+ P+L+ YNS++ Y + E+A
Sbjct: 162 ELSPSLEI--------------------------------YNSIIHSYADDGKFEEAMFY 189
Query: 261 LDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFC- 319
L+ M+E L P TY +I G D+ LK M+ GC D YN IR F
Sbjct: 190 LNHMKENGLLPITETYDGLIEAYGKWKMYDEIVLCLKRMESDGCVRDHVTYNLLIREFSR 249
Query: 320 --IAKRLREAY 328
+ KR+ + Y
Sbjct: 250 GGLLKRMEQMY 260
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 83/198 (41%), Gaps = 10/198 (5%)
Query: 241 YNSLVDVYCKGRELEKAYKVLDEM-RERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEM 299
Y ++ C+ + + +A + M + +LSP + Y SII G+ ++A L M
Sbjct: 134 YERIIRFLCEEKSMSEAIRAFRSMIDDHELSPSLEIYNSIIHSYADDGKFEEAMFYLNHM 193
Query: 300 KEYGCYPDVPAYNAAIRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDL 359
KE G P Y+ I + K E + M S G + TYNL R F L
Sbjct: 194 KENGLLPITETYDGLIEAYGKWKMYDEIVLCLKRMESDGCVRDHVTYNLLIREFSRGGLL 253
Query: 360 QSSWNMYHRMMG--LGCHPNTQSCMF----LIRLFKKQEKVEMALQLWGDMVEKGFG--- 410
+ MY +M + P+T M L +K E+ + +G +++G
Sbjct: 254 KRMEQMYQSLMSRKMTLEPSTLLSMLEAYAEFGLIEKMEETCNKIIRFGISLDEGLVRKL 313
Query: 411 SYTLVSDVLFDLLCDMGK 428
+ + +++F L D+G+
Sbjct: 314 ANVYIENLMFSRLDDLGR 331
>AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:1258581-1260265 FORWARD
LENGTH=532
Length = 532
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 93/212 (43%), Gaps = 3/212 (1%)
Query: 198 LKHQFRPNLQTFNILLSGWKTPED---AEVFFKKMREMGVTPDVVTYNSLVDVYCKGREL 254
LK + P++ T+N+ L+ + + D AE + K +E + PD VTY+ L ++Y K +
Sbjct: 223 LKIRTSPDIVTYNLWLTAFASGNDVEGAEKVYLKAKEEKLNPDWVTYSVLTNLYAKTDNV 282
Query: 255 EKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAA 314
EKA L EM + + + Y S+I +G D K++K + Y +
Sbjct: 283 EKARLALKEMEKLVSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSM 342
Query: 315 IRNFCIAKRLREAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYHRMMGLGC 374
I +A L DE S +A NL + +++ Y R++ G
Sbjct: 343 ISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGI 402
Query: 375 HPNTQSCMFLIRLFKKQEKVEMALQLWGDMVE 406
+P+ + L + K++ +E L +G ++
Sbjct: 403 NPSYSTWEILTWAYLKRKDMEKVLDCFGKAID 434
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 5/143 (3%)
Query: 177 ALLRTLCQEKSMTDARNVYHSLKH-QFRPNLQTFNILLSGWKTP---EDAEVFFKKMREM 232
+LL + Q K A ++ + F + +N +LS + + E V K+++ +
Sbjct: 167 SLLHSYVQNKLSDKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELK-I 225
Query: 233 GVTPDVVTYNSLVDVYCKGRELEKAYKVLDEMRERDLSPDVITYTSIIGGLGLVGQPDKA 292
+PD+VTYN + + G ++E A KV + +E L+PD +TY+ + +KA
Sbjct: 226 RTSPDIVTYNLWLTAFASGNDVEGAEKVYLKAKEEKLNPDWVTYSVLTNLYAKTDNVEKA 285
Query: 293 RDVLKEMKEYGCYPDVPAYNAAI 315
R LKEM++ + AY + I
Sbjct: 286 RLALKEMEKLVSKKNRVAYASLI 308
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 144/360 (40%), Gaps = 36/360 (10%)
Query: 96 GFFHTAFSLDTMLYILGRSRMFNHIWDLLIEARWKDQTLITPRTVMVV-LARTAKVCSVR 154
GF A L+ ++ + +S N+ L E D+ RT MV + + R
Sbjct: 44 GFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKI---ARTTMVSGYCASGDITLAR 100
Query: 155 QTVEFFRRFKKLVPDFDTNCFNALLRTLCQEKSMTDARNVYHSLKHQ-FRPNLQTFNILL 213
E K V DT +NA++ A N++ +KH+ F+P+ TF +L
Sbjct: 101 GVFE-----KAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVL 155
Query: 214 SGWKTPEDAE----VFFKKMREMGVTPDVVTYNSLVDVYCKGRE----LEKAYKVLDEMR 265
+G D E F + G N+LV VY K L A KV DE+
Sbjct: 156 AGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEIL 215
Query: 266 ERDLSPDVITYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVPAYNAAIRNFCIAKRLR 325
E+D ++T+++ G G D ++L+ M + + AYNA I + +
Sbjct: 216 EKDER----SWTTMMTGYVKNGYFDLGEELLEGMDD---NMKLVAYNAMISGYVNRGFYQ 268
Query: 326 EAYDLVDEMTSKGLNPNATTYNLFFRIFYWSNDLQSSWNMYH---RMMGLGCHPNTQSCM 382
EA ++V M S G+ + TY R + LQ ++ R H +
Sbjct: 269 EALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNS--- 325
Query: 383 FLIRLFKKQEKVEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLGEAEKCFLEMIEK 442
L+ L+ K K + A ++ M K S+ + L G +GEA+ F EM EK
Sbjct: 326 -LVSLYYKCGKFDEARAIFEKMPAKDLVSW----NALLSGYVSSGHIGEAKLIFKEMKEK 380