Miyakogusa Predicted Gene
- Lj5g3v1536600.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1536600.1 Non Chatacterized Hit- tr|D7LFX0|D7LFX0_ARALL
Putative uncharacterized protein (Fragment)
OS=Arabido,45.6,3e-19,seg,NULL; FAMILY NOT
NAMED,NULL,NODE_27323_length_695_cov_7.166906.path1.1
(186 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G46940.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 124 5e-29
AT4G01670.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 119 1e-27
AT3G62070.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 119 1e-27
AT2G31560.2 | Symbols: | Protein of unknown function (DUF1685) ... 67 7e-12
AT2G31560.1 | Symbols: | Protein of unknown function (DUF1685) ... 67 7e-12
AT2G43340.1 | Symbols: | Protein of unknown function (DUF1685) ... 64 6e-11
AT1G05870.4 | Symbols: | Protein of unknown function (DUF1685) ... 63 1e-10
AT1G05870.3 | Symbols: | Protein of unknown function (DUF1685) ... 63 1e-10
AT1G05870.2 | Symbols: | Protein of unknown function (DUF1685) ... 63 1e-10
AT1G05870.1 | Symbols: | Protein of unknown function (DUF1685) ... 63 1e-10
>AT2G46940.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G62070.1); Has 143 Blast hits to 141 proteins
in 14 species: Archae - 0; Bacteria - 0; Metazoa - 4;
Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink). | chr2:19286658-19287505 REVERSE
LENGTH=252
Length = 252
Score = 124 bits (310), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/105 (60%), Positives = 79/105 (75%), Gaps = 6/105 (5%)
Query: 81 HVVKGMRRESDRNGSTWVITRPKGGRR-SLCMDLEEVKACKDLGFELEVPSRLSVSLSNS 139
H G+ R+SD G V+T+ +GG++ S+ M EEVKAC+DLGFEL+VP R+S S
Sbjct: 152 HWFNGVERDSDGGGELTVLTKVRGGKKKSMKMGFEEVKACRDLGFELDVPGRVS----GS 207
Query: 140 TLDTSSGGSSPITNWRISSPGDDPKDVKARLKMWAHVVA-ASASK 183
+TSSGG+SPI NWRISSPGDDPK+VKARLKMWA VA ASAS+
Sbjct: 208 NRETSSGGNSPIANWRISSPGDDPKEVKARLKMWAQAVALASASR 252
>AT4G01670.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G62070.1); Has 141 Blast hits to 139 proteins
in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 138; Viruses - 0; Other Eukaryotes -
3 (source: NCBI BLink). | chr4:711464-712511 REVERSE
LENGTH=249
Length = 249
Score = 119 bits (298), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/80 (78%), Positives = 66/80 (82%), Gaps = 4/80 (5%)
Query: 100 TRPKGGRRSLCMDLEEVKACKDLGFELEVPSRLSVSLSNSTLDTSSGGSSPI-TNWRISS 158
TRP GG R LCMDLEEVKACKDLGFELE P R VS S ST+DTSSGG+SPI +N RISS
Sbjct: 160 TRPIGGGRPLCMDLEEVKACKDLGFELE-PGR--VSYSGSTVDTSSGGNSPISSNHRISS 216
Query: 159 PGDDPKDVKARLKMWAHVVA 178
PGDDPKDVKARLK WA VA
Sbjct: 217 PGDDPKDVKARLKAWAQAVA 236
>AT3G62070.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G46940.1); Has 137 Blast hits to 135 proteins
in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 137; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink). | chr3:22983710-22984482 REVERSE
LENGTH=228
Length = 228
Score = 119 bits (298), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 102/168 (60%), Gaps = 18/168 (10%)
Query: 37 QTVKDSASDNEGQK------TKKRRIRKETCMW----NSSEKNRSNID-EKEEEEHVVKG 85
+ V++S SD E + T RR RK T N S KN S ++ E KG
Sbjct: 61 ENVRESDSDKETRGFYSLPVTPSRRRRKLTVSGELDANESNKNGSKCSLRRQRREKKKKG 120
Query: 86 MRRESDRNG--STWVITRPKGGRRSLCMDLEEVKACKDLGFELEVP--SRLSVSLSNSTL 141
+ E D G V+TR +GG RSL M L+EVKAC+DLGFELEVP R+SVS + S
Sbjct: 121 VNGECDVGGREGLTVLTRARGGDRSLRMGLQEVKACRDLGFELEVPVPGRISVSTTGSNF 180
Query: 142 DT--SSGGSSPITNWRISSPGDDPKDVKARLKMWAHVVA-ASASKYCT 186
DT SSGG SPI WRISSPGDDPK+VKARLK+WA VA ASA++ +
Sbjct: 181 DTQTSSGGDSPIATWRISSPGDDPKEVKARLKVWAQAVALASATRQAS 228
>AT2G31560.2 | Symbols: | Protein of unknown function (DUF1685) |
chr2:13436611-13437312 FORWARD LENGTH=202
Length = 202
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 47/96 (48%), Gaps = 27/96 (28%)
Query: 112 DLEEVKACKDLGFEL---EVPS--------RLSVSLSNSTLDTSSGG------------- 147
DLEE+K C DLGF E+P L S+S LD
Sbjct: 102 DLEELKGCLDLGFGFSYDEIPELCNTLPALELCYSMSQKFLDDKQQNHHKSQEEDDSSPP 161
Query: 148 ---SSPITNWRISSPGDDPKDVKARLKMWAHVVAAS 180
++PI NW+ISSPGDDP DVKARLK WA VA +
Sbjct: 162 PTTTAPIANWKISSPGDDPDDVKARLKYWAQTVACT 197
>AT2G31560.1 | Symbols: | Protein of unknown function (DUF1685) |
chr2:13436611-13437312 FORWARD LENGTH=202
Length = 202
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 47/96 (48%), Gaps = 27/96 (28%)
Query: 112 DLEEVKACKDLGFEL---EVPS--------RLSVSLSNSTLDTSSGG------------- 147
DLEE+K C DLGF E+P L S+S LD
Sbjct: 102 DLEELKGCLDLGFGFSYDEIPELCNTLPALELCYSMSQKFLDDKQQNHHKSQEEDDSSPP 161
Query: 148 ---SSPITNWRISSPGDDPKDVKARLKMWAHVVAAS 180
++PI NW+ISSPGDDP DVKARLK WA VA +
Sbjct: 162 PTTTAPIANWKISSPGDDPDDVKARLKYWAQTVACT 197
>AT2G43340.1 | Symbols: | Protein of unknown function (DUF1685) |
chr2:18007769-18008416 FORWARD LENGTH=189
Length = 189
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 49/102 (48%), Gaps = 28/102 (27%)
Query: 112 DLEEVKACKDLGFEL---EVPS--------RLSVSLSNSTLDTSSGGS------------ 148
DLEE+K C DLGF E+P L S+S +D
Sbjct: 89 DLEELKGCVDLGFGFNYEEIPELCNTLPALELCYSMSQKFIDQDHHHHSSSSPEKKSSVL 148
Query: 149 ----SPITNWRISSPGDDPKDVKARLKMWAHVVAASASKYCT 186
SPI +W+ISSPGD+P DVKARLK WA VA + + CT
Sbjct: 149 DSPVSPIASWKISSPGDNPDDVKARLKFWAQAVACTV-RLCT 189
>AT1G05870.4 | Symbols: | Protein of unknown function (DUF1685) |
chr1:1772454-1773228 REVERSE LENGTH=189
Length = 189
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 47/98 (47%), Gaps = 28/98 (28%)
Query: 112 DLEEVKACKDLGFEL---EVPS--------RLSVSLSNSTLDTSSGGS------------ 148
DLE+++ C DLGF E+P L S+S LD S
Sbjct: 88 DLEDLRGCLDLGFGFSYDEIPELCNTLPALELCYSMSQKFLDDKQNKSPETSSVEDCPSP 147
Query: 149 -----SPITNWRISSPGDDPKDVKARLKMWAHVVAASA 181
+PI NW+ISSPGD+P DVKARLK WA VA +
Sbjct: 148 PLVTATPIANWKISSPGDNPDDVKARLKYWAQAVACTV 185
>AT1G05870.3 | Symbols: | Protein of unknown function (DUF1685) |
chr1:1772454-1773228 REVERSE LENGTH=189
Length = 189
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 47/98 (47%), Gaps = 28/98 (28%)
Query: 112 DLEEVKACKDLGFEL---EVPS--------RLSVSLSNSTLDTSSGGS------------ 148
DLE+++ C DLGF E+P L S+S LD S
Sbjct: 88 DLEDLRGCLDLGFGFSYDEIPELCNTLPALELCYSMSQKFLDDKQNKSPETSSVEDCPSP 147
Query: 149 -----SPITNWRISSPGDDPKDVKARLKMWAHVVAASA 181
+PI NW+ISSPGD+P DVKARLK WA VA +
Sbjct: 148 PLVTATPIANWKISSPGDNPDDVKARLKYWAQAVACTV 185
>AT1G05870.2 | Symbols: | Protein of unknown function (DUF1685) |
chr1:1772454-1773228 REVERSE LENGTH=189
Length = 189
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 47/98 (47%), Gaps = 28/98 (28%)
Query: 112 DLEEVKACKDLGFEL---EVPS--------RLSVSLSNSTLDTSSGGS------------ 148
DLE+++ C DLGF E+P L S+S LD S
Sbjct: 88 DLEDLRGCLDLGFGFSYDEIPELCNTLPALELCYSMSQKFLDDKQNKSPETSSVEDCPSP 147
Query: 149 -----SPITNWRISSPGDDPKDVKARLKMWAHVVAASA 181
+PI NW+ISSPGD+P DVKARLK WA VA +
Sbjct: 148 PLVTATPIANWKISSPGDNPDDVKARLKYWAQAVACTV 185
>AT1G05870.1 | Symbols: | Protein of unknown function (DUF1685) |
chr1:1772454-1773228 REVERSE LENGTH=189
Length = 189
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 47/98 (47%), Gaps = 28/98 (28%)
Query: 112 DLEEVKACKDLGFEL---EVPS--------RLSVSLSNSTLDTSSGGS------------ 148
DLE+++ C DLGF E+P L S+S LD S
Sbjct: 88 DLEDLRGCLDLGFGFSYDEIPELCNTLPALELCYSMSQKFLDDKQNKSPETSSVEDCPSP 147
Query: 149 -----SPITNWRISSPGDDPKDVKARLKMWAHVVAASA 181
+PI NW+ISSPGD+P DVKARLK WA VA +
Sbjct: 148 PLVTATPIANWKISSPGDNPDDVKARLKYWAQAVACTV 185