Miyakogusa Predicted Gene
- Lj5g3v1533550.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1533550.1 Non Chatacterized Hit- tr|I1NES2|I1NES2_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,75.16,0,HELICASE
CONSERVED C-TERMINAL DOMAIN, PUTATIVE (FRAGMENT),NULL; FAMILY NOT
NAMED,NULL; P-loop contai,CUFF.55481.1
(756 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 869 0.0
AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 869 0.0
AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 815 0.0
AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA... 479 e-135
AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA ... 475 e-134
AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) | c... 353 3e-97
AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 258 8e-69
AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 258 8e-69
AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 258 8e-69
AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 258 8e-69
AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 257 3e-68
AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |... 254 1e-67
AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |... 252 6e-67
AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosph... 246 5e-65
AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |... 243 4e-64
AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosph... 236 5e-62
AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family prote... 236 6e-62
AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 236 6e-62
AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 236 6e-62
AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosph... 236 7e-62
AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family ... 235 1e-61
AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosph... 228 2e-59
AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosph... 227 3e-59
AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosph... 225 9e-59
AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosph... 224 2e-58
AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 224 2e-58
AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 221 1e-57
AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 221 2e-57
AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 221 2e-57
AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor ... 220 3e-57
AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 218 9e-57
AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 218 2e-56
AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative | ... 217 3e-56
AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiatio... 216 4e-56
AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 216 4e-56
AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosph... 212 7e-55
AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 211 1e-54
AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 210 3e-54
AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 209 5e-54
AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 | ch... 206 6e-53
AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 204 3e-52
AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 204 3e-52
AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 201 1e-51
AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosph... 199 4e-51
AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 197 2e-50
AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 197 2e-50
AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides,... 192 6e-49
AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosph... 191 2e-48
AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 190 4e-48
AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosph... 189 6e-48
AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 189 9e-48
AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 189 9e-48
AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosph... 188 1e-47
AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase... 188 1e-47
AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosph... 185 9e-47
AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 185 1e-46
AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosph... 177 2e-44
AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 176 6e-44
AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 175 1e-43
AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosph... 174 2e-43
AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosph... 174 2e-43
AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family prot... 172 6e-43
AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 169 8e-42
AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleos... 168 1e-41
AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWAR... 160 2e-39
AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosph... 160 5e-39
AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosph... 159 6e-39
AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 157 2e-38
AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosph... 155 7e-38
AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosph... 154 2e-37
AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 | chr4:900142... 151 1e-36
AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosph... 151 2e-36
AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 150 2e-36
AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside triph... 133 4e-31
AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 133 4e-31
AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 119 1e-26
AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosph... 94 3e-19
AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 67 3e-11
AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosph... 65 3e-10
AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 64 6e-10
AT1G31360.1 | Symbols: RECQL2, ATRECQ2, MED34 | RECQ helicase L2... 62 1e-09
AT1G31360.2 | Symbols: RECQL2, MED34 | RECQ helicase L2 | chr1:1... 62 2e-09
AT4G35740.1 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helic... 59 1e-08
AT4G35740.2 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helic... 59 2e-08
AT1G35530.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 54 3e-07
AT1G35530.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 54 3e-07
AT3G02060.1 | Symbols: | DEAD/DEAH box helicase, putative | chr... 51 4e-06
AT3G02060.2 | Symbols: | DEAD/DEAH box helicase, putative | chr... 51 4e-06
>AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=748
Length = 748
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/590 (75%), Positives = 510/590 (86%), Gaps = 11/590 (1%)
Query: 61 SAVATPNSSVLTAEEAFKGLALDDVNADGYDL-APPTTVSND---ELDISKLGLPSELVR 116
SAVATPNS + +EEAFK L L D D YDL V D EL ISKL LP L
Sbjct: 60 SAVATPNS--VLSEEAFKSLGLSD--HDEYDLDGDNNNVEADDGEELAISKLSLPQRLEE 115
Query: 117 SLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDS--QSPQR 174
SL RGIT LFPIQRAVLVPAL+G+DIIARAKTGTGKTLAFGIPIIK +T+++ + R
Sbjct: 116 SLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFR 175
Query: 175 RSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVAYATQQNALSRGVDVVVGT 234
RSGRLPK LVLAPTRELAKQVEKEIKESAPYLSTVCVYGGV+Y QQ+AL+RGVDVVVGT
Sbjct: 176 RSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGT 235
Query: 235 PGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPG 294
PGRIIDL+ G SL+L EV+YLVLDEADQMLAVGFEE VE+IL+ +PT RQ+MLFSATMP
Sbjct: 236 PGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPT 295
Query: 295 WVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTI 354
WVKKL+RKYL+ PL IDLVG+ +EKLA GIKLYA++ T+ SKRT+LSDL+TVYAKGGKTI
Sbjct: 296 WVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLITVYAKGGKTI 355
Query: 355 VFTRTKKDADEVSLSLTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLD 414
VFT+TK+DADEVSL+L+NSIA+EALHGDISQHQRERTLN FRQGKFTVLVATDVASRGLD
Sbjct: 356 VFTQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLD 415
Query: 415 IPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSLEHDVGCKFEF 474
IPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG+AILM+TS+Q+RTVRSLE DVGC FEF
Sbjct: 416 IPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVGCHFEF 475
Query: 475 VSPPATQEILESSAEQVVAALSRVHPESVEFFTATAQKLVEERGTSVLAAALAQLSGFSR 534
+SPP ++LESSA+QVVA L+ VHP+S++FF+ATAQKL EE+GT LAAALA LSGFS+
Sbjct: 476 ISPPTVGDLLESSADQVVATLNGVHPDSIKFFSATAQKLYEEKGTDALAAALAHLSGFSQ 535
Query: 535 PPSSRSLINQEQGCITLQLTRDLDALHGKYLSARSVTGFLSDVYSPAADEVGKIHLIADE 594
PPSSRSL++ E+G +TLQL RD G +LSARSVTGFLSD+Y AADEVGKI LIAD+
Sbjct: 536 PPSSRSLLSHEKGWVTLQLIRDPTNARG-FLSARSVTGFLSDLYRTAADEVGKIFLIADD 594
Query: 595 RVQGAVFDLPEDISRELLKKDIPPGNTISLITKLPALQDDEPTSDYYGRF 644
R+QGAVFDLPE+I++ELL+KD+P GN++S+ITKLP LQDD P+SD YGRF
Sbjct: 595 RIQGAVFDLPEEIAKELLEKDVPEGNSLSMITKLPPLQDDGPSSDNYGRF 644
>AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=747
Length = 747
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/590 (75%), Positives = 510/590 (86%), Gaps = 11/590 (1%)
Query: 61 SAVATPNSSVLTAEEAFKGLALDDVNADGYDL-APPTTVSND---ELDISKLGLPSELVR 116
SAVATPNS + +EEAFK L L D D YDL V D EL ISKL LP L
Sbjct: 60 SAVATPNS--VLSEEAFKSLGLSD--HDEYDLDGDNNNVEADDGEELAISKLSLPQRLEE 115
Query: 117 SLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDS--QSPQR 174
SL RGIT LFPIQRAVLVPAL+G+DIIARAKTGTGKTLAFGIPIIK +T+++ + R
Sbjct: 116 SLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFR 175
Query: 175 RSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVAYATQQNALSRGVDVVVGT 234
RSGRLPK LVLAPTRELAKQVEKEIKESAPYLSTVCVYGGV+Y QQ+AL+RGVDVVVGT
Sbjct: 176 RSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGT 235
Query: 235 PGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPG 294
PGRIIDL+ G SL+L EV+YLVLDEADQMLAVGFEE VE+IL+ +PT RQ+MLFSATMP
Sbjct: 236 PGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPT 295
Query: 295 WVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTI 354
WVKKL+RKYL+ PL IDLVG+ +EKLA GIKLYA++ T+ SKRT+LSDL+TVYAKGGKTI
Sbjct: 296 WVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLITVYAKGGKTI 355
Query: 355 VFTRTKKDADEVSLSLTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLD 414
VFT+TK+DADEVSL+L+NSIA+EALHGDISQHQRERTLN FRQGKFTVLVATDVASRGLD
Sbjct: 356 VFTQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLD 415
Query: 415 IPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSLEHDVGCKFEF 474
IPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG+AILM+TS+Q+RTVRSLE DVGC FEF
Sbjct: 416 IPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVGCHFEF 475
Query: 475 VSPPATQEILESSAEQVVAALSRVHPESVEFFTATAQKLVEERGTSVLAAALAQLSGFSR 534
+SPP ++LESSA+QVVA L+ VHP+S++FF+ATAQKL EE+GT LAAALA LSGFS+
Sbjct: 476 ISPPTVGDLLESSADQVVATLNGVHPDSIKFFSATAQKLYEEKGTDALAAALAHLSGFSQ 535
Query: 535 PPSSRSLINQEQGCITLQLTRDLDALHGKYLSARSVTGFLSDVYSPAADEVGKIHLIADE 594
PPSSRSL++ E+G +TLQL RD G +LSARSVTGFLSD+Y AADEVGKI LIAD+
Sbjct: 536 PPSSRSLLSHEKGWVTLQLIRDPTNARG-FLSARSVTGFLSDLYRTAADEVGKIFLIADD 594
Query: 595 RVQGAVFDLPEDISRELLKKDIPPGNTISLITKLPALQDDEPTSDYYGRF 644
R+QGAVFDLPE+I++ELL+KD+P GN++S+ITKLP LQDD P+SD YGRF
Sbjct: 595 RIQGAVFDLPEEIAKELLEKDVPEGNSLSMITKLPPLQDDGPSSDNYGRF 644
>AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288618 REVERSE LENGTH=655
Length = 655
Score = 815 bits (2105), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/524 (77%), Positives = 469/524 (89%), Gaps = 3/524 (0%)
Query: 123 ITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDS--QSPQRRSGRLP 180
+ SL RAVLVPAL+G+DIIARAKTGTGKTLAFGIPIIK +T+++ + RRSGRLP
Sbjct: 29 LKSLLRNVRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLP 88
Query: 181 KALVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIID 240
K LVLAPTRELAKQVEKEIKESAPYLSTVCVYGGV+Y QQ+AL+RGVDVVVGTPGRIID
Sbjct: 89 KFLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIID 148
Query: 241 LVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLS 300
L+ G SL+L EV+YLVLDEADQMLAVGFEE VE+IL+ +PT RQ+MLFSATMP WVKKL+
Sbjct: 149 LIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLA 208
Query: 301 RKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTK 360
RKYL+ PL IDLVG+ +EKLA GIKLYA++ T+ SKRT+LSDL+TVYAKGGKTIVFT+TK
Sbjct: 209 RKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTK 268
Query: 361 KDADEVSLSLTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDL 420
+DADEVSL+L+NSIA+EALHGDISQHQRERTLN FRQGKFTVLVATDVASRGLDIPNVDL
Sbjct: 269 RDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDL 328
Query: 421 VIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSLEHDVGCKFEFVSPPAT 480
VIHYELPNDPETFVHRSGRTGRAGKEG+AILM+TS+Q+RTVRSLE DVGC FEF+SPP
Sbjct: 329 VIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVGCHFEFISPPTV 388
Query: 481 QEILESSAEQVVAALSRVHPESVEFFTATAQKLVEERGTSVLAAALAQLSGFSRPPSSRS 540
++LESSA+QVVA L+ VHP+S++FF+ATAQKL EE+GT LAAALA LSGFS+PPSSRS
Sbjct: 389 GDLLESSADQVVATLNGVHPDSIKFFSATAQKLYEEKGTDALAAALAHLSGFSQPPSSRS 448
Query: 541 LINQEQGCITLQLTRDLDALHGKYLSARSVTGFLSDVYSPAADEVGKIHLIADERVQGAV 600
L++ E+G +TLQL RD G +LSARSVTGFLSD+Y AADEVGKI LIAD+R+QGAV
Sbjct: 449 LLSHEKGWVTLQLIRDPTNARG-FLSARSVTGFLSDLYRTAADEVGKIFLIADDRIQGAV 507
Query: 601 FDLPEDISRELLKKDIPPGNTISLITKLPALQDDEPTSDYYGRF 644
FDLPE+I++ELL+KD+P GN++S+ITKLP LQDD P+SD YGRF
Sbjct: 508 FDLPEEIAKELLEKDVPEGNSLSMITKLPPLQDDGPSSDNYGRF 551
>AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA
helicase 2 | chr3:7892641-7895145 FORWARD LENGTH=616
Length = 616
Score = 479 bits (1233), Expect = e-135, Method: Compositional matrix adjust.
Identities = 228/376 (60%), Positives = 292/376 (77%), Gaps = 2/376 (0%)
Query: 97 TVSNDELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLA 156
+V D L IS+LG+ E+V++L ++GI LFPIQ+AVL PA+EG+D+I RA+TGTGKTLA
Sbjct: 98 SVGGDGLAISELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLA 157
Query: 157 FGIPIIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVA 216
FGIPII + + R GR P LVLAPTRELA+QVEKE +ESAP L T+C+YGG
Sbjct: 158 FGIPIIDKIIKYNAKHGR--GRNPLCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTP 215
Query: 217 YATQQNALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETIL 276
Q L GVDV VGTPGR+IDL+ +L L+EVQ++VLDEADQML VGF EDVE IL
Sbjct: 216 IGQQMRQLDYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIIL 275
Query: 277 QTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSK 336
+ +P RQ+M+FSATMP W++ L++KYLN PLT+DLVG+ ++KLA GI Y++ A + +
Sbjct: 276 EKLPEKRQSMMFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSIIADSYGR 335
Query: 337 RTMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASEALHGDISQHQRERTLNGFR 396
+++ LVT +AKGGK IVFT+TK+DAD +S +L S EALHGDISQ QRERTL GFR
Sbjct: 336 ASIIGPLVTEHAKGGKCIVFTQTKRDADRLSYALARSFKCEALHGDISQSQRERTLAGFR 395
Query: 397 QGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSN 456
G F +LVATDVA+RGLD+PNVDL+IHYELPN+ ETFVHR+GRTGRAGK+G+AIL+Y+ +
Sbjct: 396 DGHFNILVATDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQD 455
Query: 457 QRRTVRSLEHDVGCKF 472
Q R V+ +E +VG +F
Sbjct: 456 QSRAVKIIEREVGSRF 471
>AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA
helicase 1 | chr3:7887382-7889806 FORWARD LENGTH=610
Length = 610
Score = 475 bits (1222), Expect = e-134, Method: Compositional matrix adjust.
Identities = 224/370 (60%), Positives = 288/370 (77%), Gaps = 2/370 (0%)
Query: 103 LDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPII 162
L I+ LG+ E+V++L RGI LFPIQ+AVL PA+EG+D+I RA+TGTGKTLAFGIPII
Sbjct: 116 LAIADLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPII 175
Query: 163 KGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVAYATQQN 222
+ + R G+ P+ LVLAPTRELA+QVEKE +ESAP L T+C+YGG Q
Sbjct: 176 DKIIKFNAKHGR--GKNPQCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQMR 233
Query: 223 ALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTG 282
L+ G+DV VGTPGRIIDL+ +L L+EVQ++VLDEADQML VGF EDVE ILQ +P
Sbjct: 234 ELNYGIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAK 293
Query: 283 RQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSD 342
RQ+M+FSATMP W++ L++KYLN PLTIDLVG+ ++KLA GI +Y+++A + + +++
Sbjct: 294 RQSMMFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYGRASIIGP 353
Query: 343 LVTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASEALHGDISQHQRERTLNGFRQGKFTV 402
LV + KGGK IVFT+TK+DAD ++ L S EALHGDISQ QRERTL GFR G F++
Sbjct: 354 LVKEHGKGGKCIVFTQTKRDADRLAFGLAKSYKCEALHGDISQAQRERTLAGFRDGNFSI 413
Query: 403 LVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVR 462
LVATDVA+RGLD+PNVDLVIHYELPN+ ETFVHR+GRTGRAGK+G+AIL++ +Q R V+
Sbjct: 414 LVATDVAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQTRAVK 473
Query: 463 SLEHDVGCKF 472
+E +VG +F
Sbjct: 474 MIEKEVGSRF 483
>AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) |
chr5:24980542-24983879 REVERSE LENGTH=671
Length = 671
Score = 353 bits (905), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 220/546 (40%), Positives = 319/546 (58%), Gaps = 27/546 (4%)
Query: 105 ISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKG 164
+SK + + L L GI +LFPIQ + L+G D++ RA+TG GKTLAF +PI++
Sbjct: 98 VSKFRISAPLREKLKANGIEALFPIQASTFDMVLDGADLVGRARTGQGKTLAFVLPILES 157
Query: 165 VTDDSQSPQRRSG--RLPKALVLAPTRELAKQVEKEIKE--SAPYLSTVCVYGGVAYATQ 220
+ + +R+ G R P LVL PTRELAKQV + + LS+ C+YGG +Y Q
Sbjct: 158 LVNGPAKSKRKMGYGRSPSVLVLLPTRELAKQVAADFDAYGGSLGLSSCCLYGGDSYPVQ 217
Query: 221 QNALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTV- 279
+ L RGVD+VVGTPGRI D + +L + +Q+ VLDEAD+ML +GF EDVE IL V
Sbjct: 218 EGKLKRGVDIVVGTPGRIKDHIERQNLDFSYLQFRVLDEADEMLRMGFVEDVELILGKVE 277
Query: 280 -PTGRQTMLFSATMPGWVKKLSRKYLNK-PLTIDLVGEDEEKLAHGIKLYAVSATTNSKR 337
T QT+LFSAT+P WVK +S ++L + TIDLVG D+ K ++ ++ A+ +
Sbjct: 278 DSTKVQTLLFSATLPSWVKNISNRFLKRDQKTIDLVGNDKMKASNSVRHIAIPCNKAAMA 337
Query: 338 TMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASEALHGDISQHQRERTLNGFRQ 397
++ D+++ Y+ GG+TI+F TK E+S L S ALHG+I Q QRE TL GFR
Sbjct: 338 RLIPDIISCYSSGGQTIIFAETKVQVSELSGLLD---GSRALHGEIPQSQREVTLAGFRN 394
Query: 398 GKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQ 457
GKF LVAT+VA+RGLDI +V L+I E P + E ++HRSGRTGRAG G A+ +Y S +
Sbjct: 395 GKFATLVATNVAARGLDINDVQLIIQCEPPREVEAYIHRSGRTGRAGNTGVAVTLYDS-R 453
Query: 458 RRTVRSLEHDVGCKFEFVSPPATQEILESSAEQVVAALSRVHPESVEFFTATAQKLVEER 517
+ +V +E + G KFE ++ P EI S + + +V V F A++L+E
Sbjct: 454 KSSVSRIEKEAGIKFEHLAAPQPDEIARSGGMEAAEKVKQVCDSVVPAFLEAAKELLETS 513
Query: 518 GTS---VLAAALAQLSGFSRPPSSRSLINQEQGCITLQLTRDLDALHGKYLSARS-VTGF 573
G S +LA ALA+ +GF+ RSL+ + +TL L GK + + S V G
Sbjct: 514 GLSAEVLLAKALAKTAGFTE-IKKRSLLTSMENYVTLHLE------AGKPIYSPSFVYGL 566
Query: 574 LSDVY-SPAADEVGKIHLIADERVQGAVFDLPE-DISRELLKKDIPPGN-TISLITKLPA 630
L V + + + L AD+ GAVFD+ + D+ + G+ ++ ++ +P
Sbjct: 567 LRRVLPDDKVEMIEGLSLTADK--TGAVFDVKQSDLDLFIAGAQKSAGSMSLEVVKVMPK 624
Query: 631 LQDDEP 636
LQ+ EP
Sbjct: 625 LQEREP 630
>AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=618
Length = 618
Score = 258 bits (660), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 142/375 (37%), Positives = 217/375 (57%), Gaps = 18/375 (4%)
Query: 84 DVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDI 143
++ G + PP + G P EL+R +++ G ++ PIQ A++G+DI
Sbjct: 145 EITVSGGQVPPPL------MSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDI 198
Query: 144 IARAKTGTGKTLAFGIP---IIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIK 200
+A AKTG+GKTL + IP ++ + +DS R G P LVL+PTRELA Q+++E
Sbjct: 199 VAIAKTGSGKTLGYLIPGFLHLQRIRNDS-----RMG--PTILVLSPTRELATQIQEEAV 251
Query: 201 E--SAPYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLD 258
+ + +S C+YGG Q L RG D+VV TPGR+ D++ + L ++ YLVLD
Sbjct: 252 KFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLD 311
Query: 259 EADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEE 318
EAD+ML +GFE + I++ +PT RQT++++AT P V+K++ L P +++ DE
Sbjct: 312 EADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDEL 371
Query: 319 KLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASEA 378
I + K+ L ++ G K I+F TK+ D+++ +LT + A
Sbjct: 372 VANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAA 431
Query: 379 LHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSG 438
+HGD SQ +R+ LN FR G+ VLVATDVA+RGLD+ ++ V++Y+ PN E +VHR G
Sbjct: 432 IHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIG 491
Query: 439 RTGRAGKEGTAILMY 453
RTGRAG G A +
Sbjct: 492 RTGRAGATGQAFTFF 506
>AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 258 bits (660), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 142/375 (37%), Positives = 217/375 (57%), Gaps = 18/375 (4%)
Query: 84 DVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDI 143
++ G + PP + G P EL+R +++ G ++ PIQ A++G+DI
Sbjct: 145 EITVSGGQVPPPL------MSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDI 198
Query: 144 IARAKTGTGKTLAFGIP---IIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIK 200
+A AKTG+GKTL + IP ++ + +DS R G P LVL+PTRELA Q+++E
Sbjct: 199 VAIAKTGSGKTLGYLIPGFLHLQRIRNDS-----RMG--PTILVLSPTRELATQIQEEAV 251
Query: 201 E--SAPYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLD 258
+ + +S C+YGG Q L RG D+VV TPGR+ D++ + L ++ YLVLD
Sbjct: 252 KFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLD 311
Query: 259 EADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEE 318
EAD+ML +GFE + I++ +PT RQT++++AT P V+K++ L P +++ DE
Sbjct: 312 EADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDEL 371
Query: 319 KLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASEA 378
I + K+ L ++ G K I+F TK+ D+++ +LT + A
Sbjct: 372 VANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAA 431
Query: 379 LHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSG 438
+HGD SQ +R+ LN FR G+ VLVATDVA+RGLD+ ++ V++Y+ PN E +VHR G
Sbjct: 432 IHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIG 491
Query: 439 RTGRAGKEGTAILMY 453
RTGRAG G A +
Sbjct: 492 RTGRAGATGQAFTFF 506
>AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 258 bits (660), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 142/375 (37%), Positives = 217/375 (57%), Gaps = 18/375 (4%)
Query: 84 DVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDI 143
++ G + PP + G P EL+R +++ G ++ PIQ A++G+DI
Sbjct: 145 EITVSGGQVPPPL------MSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDI 198
Query: 144 IARAKTGTGKTLAFGIP---IIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIK 200
+A AKTG+GKTL + IP ++ + +DS R G P LVL+PTRELA Q+++E
Sbjct: 199 VAIAKTGSGKTLGYLIPGFLHLQRIRNDS-----RMG--PTILVLSPTRELATQIQEEAV 251
Query: 201 E--SAPYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLD 258
+ + +S C+YGG Q L RG D+VV TPGR+ D++ + L ++ YLVLD
Sbjct: 252 KFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLD 311
Query: 259 EADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEE 318
EAD+ML +GFE + I++ +PT RQT++++AT P V+K++ L P +++ DE
Sbjct: 312 EADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDEL 371
Query: 319 KLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASEA 378
I + K+ L ++ G K I+F TK+ D+++ +LT + A
Sbjct: 372 VANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAA 431
Query: 379 LHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSG 438
+HGD SQ +R+ LN FR G+ VLVATDVA+RGLD+ ++ V++Y+ PN E +VHR G
Sbjct: 432 IHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIG 491
Query: 439 RTGRAGKEGTAILMY 453
RTGRAG G A +
Sbjct: 492 RTGRAGATGQAFTFF 506
>AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 258 bits (660), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 142/375 (37%), Positives = 217/375 (57%), Gaps = 18/375 (4%)
Query: 84 DVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDI 143
++ G + PP + G P EL+R +++ G ++ PIQ A++G+DI
Sbjct: 145 EITVSGGQVPPPL------MSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDI 198
Query: 144 IARAKTGTGKTLAFGIP---IIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIK 200
+A AKTG+GKTL + IP ++ + +DS R G P LVL+PTRELA Q+++E
Sbjct: 199 VAIAKTGSGKTLGYLIPGFLHLQRIRNDS-----RMG--PTILVLSPTRELATQIQEEAV 251
Query: 201 E--SAPYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLD 258
+ + +S C+YGG Q L RG D+VV TPGR+ D++ + L ++ YLVLD
Sbjct: 252 KFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLD 311
Query: 259 EADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEE 318
EAD+ML +GFE + I++ +PT RQT++++AT P V+K++ L P +++ DE
Sbjct: 312 EADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDEL 371
Query: 319 KLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASEA 378
I + K+ L ++ G K I+F TK+ D+++ +LT + A
Sbjct: 372 VANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAA 431
Query: 379 LHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSG 438
+HGD SQ +R+ LN FR G+ VLVATDVA+RGLD+ ++ V++Y+ PN E +VHR G
Sbjct: 432 IHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIG 491
Query: 439 RTGRAGKEGTAILMY 453
RTGRAG G A +
Sbjct: 492 RTGRAGATGQAFTFF 506
>AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:20574634-20577141 FORWARD LENGTH=501
Length = 501
Score = 257 bits (656), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 151/418 (36%), Positives = 234/418 (55%), Gaps = 13/418 (3%)
Query: 63 VATPNSSVLTAEEAFKGLALDDVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRG 122
V +P + +T E + L ++ +G D+ P D +G P ++ + G
Sbjct: 65 VESPAVAAMTDTEVEEYRKLREITVEGKDIPKPVKSFRD------VGFPDYVLEEVKKAG 118
Query: 123 ITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKA 182
T PIQ A++G+D+I A+TG+GKTL++ +P I V + P G P
Sbjct: 119 FTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHV---NAQPMLAHGDGPIV 175
Query: 183 LVLAPTRELAKQVEKEIKE--SAPYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIID 240
LVLAPTRELA Q+++E + S+ + T C+YGGV Q L +GV++V+ TPGR+ID
Sbjct: 176 LVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLID 235
Query: 241 LVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLS 300
++ N+ L V YLVLDEAD+ML +GF+ + I+ + RQT+ +SAT P V++LS
Sbjct: 236 MMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLS 295
Query: 301 RKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTK 360
+K+L P + ++G + K I+ + + K L L+ G + +VF TK
Sbjct: 296 KKFLYNPYKV-IIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLDTK 354
Query: 361 KDADEVSLSL-TNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVD 419
K D+++ L + + ++HGD SQ +R+ L+ FR GK ++ ATDVA+RGLD+ +V
Sbjct: 355 KGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVK 414
Query: 420 LVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSLEHDVGCKFEFVSP 477
VI+Y+ P E +VHR GRTGRAG +GTA +T R + L + + + VSP
Sbjct: 415 YVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKELTNILQEAGQKVSP 472
>AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=645
Length = 645
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 147/385 (38%), Positives = 221/385 (57%), Gaps = 24/385 (6%)
Query: 86 NADGYDLAPPTTVSNDELDIS------------KLGLPSELVRSLVNRGITSLFPIQRAV 133
+A G +L+P E+ +S GLP+EL+R + + G ++ PIQ
Sbjct: 132 SAAGNELSPEAYCRKHEITVSGGQVPPPLMSFEATGLPNELLREVYSAGFSAPSPIQAQS 191
Query: 134 LVPALEGKDIIARAKTGTGKTLAFGIP---IIKGVTDDSQSPQRRSGRLPKALVLAPTRE 190
A++ +DI+A AKTG+GKTL + IP ++ + +DS R G P LVL+PTRE
Sbjct: 192 WPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHLQRIHNDS-----RMG--PTILVLSPTRE 244
Query: 191 LAKQVEKEIKE--SAPYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNGNSLR 248
LA Q++ E + + +S C+YGG Q + RGVD+VV TPGR+ D++ +
Sbjct: 245 LATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGRLNDILEMKRIS 304
Query: 249 LTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPL 308
L +V YLVLDEAD+ML +GFE + I+ VPT RQT++++AT P V+K++ L P
Sbjct: 305 LHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEVRKIAADLLVNPA 364
Query: 309 TIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTKKDADEVSL 368
+++ DE I K + L ++ G K I+F TK+ D+++
Sbjct: 365 QVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQILRSQEPGSKIIIFCSTKRMCDQLAR 424
Query: 369 SLTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPN 428
+LT + + A+HGD SQ +R+ LN FR G+ VLVATDVA+RGLD+ ++ +V++Y+ PN
Sbjct: 425 NLTRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPN 484
Query: 429 DPETFVHRSGRTGRAGKEGTAILMY 453
E +VHR GRTGRAG G A +
Sbjct: 485 GVEDYVHRIGRTGRAGATGLAYTFF 509
>AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |
chr3:1985697-1989666 REVERSE LENGTH=1088
Length = 1088
Score = 252 bits (644), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 139/351 (39%), Positives = 203/351 (57%), Gaps = 12/351 (3%)
Query: 109 GLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIP---IIKGV 165
GLP E++R L++ G S PIQ AL+ +DI+A AKTG+GKTL + IP +++
Sbjct: 441 GLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFILLRHC 500
Query: 166 TDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKE--SAPYLSTVCVYGGVAYATQQNA 223
+DS R+G P L+LAPTRELA Q++ E + +S C+YGG Q
Sbjct: 501 RNDS-----RNG--PTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKE 553
Query: 224 LSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGR 283
L RG D+VV TPGR+ D++ + +V LVLDEAD+ML +GFE + I+ +P R
Sbjct: 554 LERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRR 613
Query: 284 QTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDL 343
QT++++AT P V+K++ L P+ +++ DE I Y K L +
Sbjct: 614 QTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEVVPQMEKERRLEQI 673
Query: 344 VTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASEALHGDISQHQRERTLNGFRQGKFTVL 403
+ +G K I+F TK+ D ++ S+ + +HGD +Q +R+ LN FR GK VL
Sbjct: 674 LRSQERGSKVIIFCSTKRLCDHLARSVGRHFGAVVIHGDKTQGERDWVLNQFRSGKSCVL 733
Query: 404 VATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYT 454
+ATDVA+RGLDI ++ +VI+Y+ P E +VHR GRTGRAG G A +T
Sbjct: 734 IATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAFTFFT 784
>AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25318967-25322071
REVERSE LENGTH=591
Length = 591
Score = 246 bits (627), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 141/405 (34%), Positives = 221/405 (54%), Gaps = 13/405 (3%)
Query: 63 VATPNSSVLTAEEAFKGLALDDVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRG 122
V +P +T ++ D++ +G D+ P + D P ++ ++ G
Sbjct: 131 VESPTVQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDA------NFPDNILEAIAKLG 184
Query: 123 ITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKA 182
T PIQ AL+G+D+I A+TG+GKTLA+ +P + V S P+ P
Sbjct: 185 FTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHV---SAQPRLGQDDGPIV 241
Query: 183 LVLAPTRELAKQVEKEIKESA--PYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIID 240
L+LAPTRELA Q+++E ++ + + C+YGG Q L RGV++V+ TPGR+ID
Sbjct: 242 LILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLID 301
Query: 241 LVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLS 300
++ L V YLVLDEAD+ML +GFE + I+ + RQT+L+SAT P V+ L+
Sbjct: 302 MLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLA 361
Query: 301 RKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTK 360
R++L P ++G + K I T K L L+ G K ++F TK
Sbjct: 362 RQFLRDPYKA-IIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETK 420
Query: 361 KDADEVSLSL-TNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVD 419
+ D+V+ L + + A+HGD +Q +R+R L F+ G+ ++ ATDVA+RGLD+ ++
Sbjct: 421 RGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIK 480
Query: 420 LVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSL 464
V++Y+ PN E ++HR GRTGRAG +G A +T + + R L
Sbjct: 481 CVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFAREL 525
>AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=712
Length = 712
Score = 243 bits (620), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 136/343 (39%), Positives = 203/343 (59%), Gaps = 12/343 (3%)
Query: 116 RSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIP---IIKGVTDDSQSP 172
R + + G ++ PIQ A++ +DI+A AKTG+GKTL + IP ++ + +DS
Sbjct: 242 RMVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHLQRIHNDS--- 298
Query: 173 QRRSGRLPKALVLAPTRELAKQVEKEIKE--SAPYLSTVCVYGGVAYATQQNALSRGVDV 230
R G P LVL+PTRELA Q++ E + + +S C+YGG Q + RGVD+
Sbjct: 299 --RMG--PTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDI 354
Query: 231 VVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTMLFSA 290
VV TPGR+ D++ + L +V YLVLDEAD+ML +GFE + I+ VPT RQT++++A
Sbjct: 355 VVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTA 414
Query: 291 TMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKG 350
T P V+K++ L P +++ DE I K + L ++ G
Sbjct: 415 TWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQILRSQEPG 474
Query: 351 GKTIVFTRTKKDADEVSLSLTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS 410
K I+F TK+ D+++ +LT + + A+HGD SQ +R+ LN FR G+ VLVATDVA+
Sbjct: 475 SKIIIFCSTKRMCDQLARNLTRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAA 534
Query: 411 RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMY 453
RGLD+ ++ +V++Y+ PN E +VHR GRTGRAG G A +
Sbjct: 535 RGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFF 577
>AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:17705382-17708744
FORWARD LENGTH=633
Length = 633
Score = 236 bits (602), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 139/354 (39%), Positives = 204/354 (57%), Gaps = 21/354 (5%)
Query: 128 PIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGR--LPKALVL 185
P+QR + LEG+D++A A+TG+GKT AF PII G+ D + R R P A++L
Sbjct: 184 PVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIISGIMKDQHVQRPRGSRTVYPLAVIL 243
Query: 186 APTRELAKQVEKEIKESAPY--LSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVN 243
+PTRELA Q+ E K+ + + V YGG Q L RGVD++V TPGR+ DL+
Sbjct: 244 SPTRELASQIHDEAKKFSYQTGVKVVVAYGGTPINQQLRELERGVDILVATPGRLNDLLE 303
Query: 244 GNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTV---PTG-RQTMLFSATMPGWVKKL 299
+ + +++L LDEAD+ML +GFE + I++ + P G RQT+LFSAT P +++L
Sbjct: 304 RARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTLLFSATFPREIQRL 363
Query: 300 SRKYLNKP--LTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVT------VYAKGG 351
+ +L L + VG + + ++ S KR+ L DL+ + K
Sbjct: 364 AADFLANYIFLAVGRVGSSTDLIVQRVEFVLDS----DKRSHLMDLLHAQRENGIQGKQA 419
Query: 352 KTIVFTRTKKDADEVSLSLT-NSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS 410
T+VF TK+ AD + L N + ++HGD +Q +RE L F+ G+ +LVATDVA+
Sbjct: 420 LTLVFVETKRGADSLENWLCINGFPATSIHGDRTQQEREVALKAFKSGRTPILVATDVAA 479
Query: 411 RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSL 464
RGLDIP+V V++++LPND + +VHR GRTGRAGK G A + R L
Sbjct: 480 RGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNDGNTSLARPL 533
>AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 236 bits (601), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 138/352 (39%), Positives = 204/352 (57%), Gaps = 19/352 (5%)
Query: 128 PIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGR--LPKALVL 185
P+QR + L +D++A A+TG+GKT AF PII G+ D + R R P A++L
Sbjct: 176 PVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVIL 235
Query: 186 APTRELAKQVEKEIKESAPY--LSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVN 243
+PTRELA Q+ E K+ + + V YGG Q L RG D++V TPGR+ DL+
Sbjct: 236 SPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLE 295
Query: 244 GNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTV---PTG-RQTMLFSATMPGWVKKL 299
+ + +++L LDEAD+ML +GFE + I++ + P G RQTMLFSAT P +++L
Sbjct: 296 RARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRL 355
Query: 300 SRKYLNKP--LTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVYA----KGGKT 353
+ +++ L + VG + + ++ S KR+ L DL+ K T
Sbjct: 356 AADFMSNYIFLAVGRVGSSTDLITQRVEFVQES----DKRSHLMDLLHAQRETQDKQSLT 411
Query: 354 IVFTRTKKDADEVSLSLT-NSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRG 412
+VF TK+ AD + L N + ++HGD +Q +RE L F+ G+ +LVATDVA+RG
Sbjct: 412 LVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARG 471
Query: 413 LDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSL 464
LDIP+V V++++LPND + +VHR GRTGRAGK G A + N + RSL
Sbjct: 472 LDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARSL 523
>AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 236 bits (601), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 138/352 (39%), Positives = 204/352 (57%), Gaps = 19/352 (5%)
Query: 128 PIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGR--LPKALVL 185
P+QR + L +D++A A+TG+GKT AF PII G+ D + R R P A++L
Sbjct: 176 PVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVIL 235
Query: 186 APTRELAKQVEKEIKESAPY--LSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVN 243
+PTRELA Q+ E K+ + + V YGG Q L RG D++V TPGR+ DL+
Sbjct: 236 SPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLE 295
Query: 244 GNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTV---PTG-RQTMLFSATMPGWVKKL 299
+ + +++L LDEAD+ML +GFE + I++ + P G RQTMLFSAT P +++L
Sbjct: 296 RARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRL 355
Query: 300 SRKYLNKP--LTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVYA----KGGKT 353
+ +++ L + VG + + ++ S KR+ L DL+ K T
Sbjct: 356 AADFMSNYIFLAVGRVGSSTDLITQRVEFVQES----DKRSHLMDLLHAQRETQDKQSLT 411
Query: 354 IVFTRTKKDADEVSLSLT-NSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRG 412
+VF TK+ AD + L N + ++HGD +Q +RE L F+ G+ +LVATDVA+RG
Sbjct: 412 LVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARG 471
Query: 413 LDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSL 464
LDIP+V V++++LPND + +VHR GRTGRAGK G A + N + RSL
Sbjct: 472 LDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARSL 523
>AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 236 bits (601), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 138/352 (39%), Positives = 204/352 (57%), Gaps = 19/352 (5%)
Query: 128 PIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGR--LPKALVL 185
P+QR + L +D++A A+TG+GKT AF PII G+ D + R R P A++L
Sbjct: 176 PVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVIL 235
Query: 186 APTRELAKQVEKEIKESAPY--LSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVN 243
+PTRELA Q+ E K+ + + V YGG Q L RG D++V TPGR+ DL+
Sbjct: 236 SPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLE 295
Query: 244 GNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTV---PTG-RQTMLFSATMPGWVKKL 299
+ + +++L LDEAD+ML +GFE + I++ + P G RQTMLFSAT P +++L
Sbjct: 296 RARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRL 355
Query: 300 SRKYLNKP--LTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVYA----KGGKT 353
+ +++ L + VG + + ++ S KR+ L DL+ K T
Sbjct: 356 AADFMSNYIFLAVGRVGSSTDLITQRVEFVQES----DKRSHLMDLLHAQRETQDKQSLT 411
Query: 354 IVFTRTKKDADEVSLSLT-NSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRG 412
+VF TK+ AD + L N + ++HGD +Q +RE L F+ G+ +LVATDVA+RG
Sbjct: 412 LVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARG 471
Query: 413 LDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSL 464
LDIP+V V++++LPND + +VHR GRTGRAGK G A + N + RSL
Sbjct: 472 LDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARSL 523
>AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:21657099-21660352
FORWARD LENGTH=646
Length = 646
Score = 236 bits (601), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 140/354 (39%), Positives = 202/354 (57%), Gaps = 21/354 (5%)
Query: 128 PIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDS--QSPQRRSGRLPKALVL 185
P+QR + G+D++A A+TG+GKT AF PII G+ D + P+ G P A++L
Sbjct: 171 PVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVIL 230
Query: 186 APTRELAKQVEKEIKESAPY--LSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVN 243
+PTRELA Q+ E ++ + + V YGG Q L RGVD++V TPGR+ DL+
Sbjct: 231 SPTRELACQIHDEARKFSYQTGVKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLE 290
Query: 244 GNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTV----PTGRQTMLFSATMPGWVKKL 299
+ L V++L LDEAD+ML +GFE + I+Q + P RQTMLFSAT P +++L
Sbjct: 291 RGRVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRL 350
Query: 300 SRKYLNKP--LTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGK----- 352
+ +L+ L + VG + + ++ S KR+ L DL+ + G
Sbjct: 351 ASDFLSNYIFLAVGRVGSSTDLIVQRVEFVHDS----DKRSHLMDLLHAQRENGNQGKQA 406
Query: 353 -TIVFTRTKKDADEVSLSLT-NSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS 410
T+VF TKK AD + L N + +HGD SQ +RE L F+ G+ +LVATDVA+
Sbjct: 407 LTLVFVETKKGADSLENWLCINGFPATTIHGDRSQQEREVALRSFKTGRTPILVATDVAA 466
Query: 411 RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSL 464
RGLDIP+V V++++LPND + +VHR GRTGRAG G A + N + L
Sbjct: 467 RGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGNSGLATAFFNDNNTTMAKPL 520
>AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family
protein | chr1:11479921-11482707 FORWARD LENGTH=537
Length = 537
Score = 235 bits (599), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 138/334 (41%), Positives = 206/334 (61%), Gaps = 8/334 (2%)
Query: 128 PIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRL-PKALVLA 186
PIQ L+G+D+I AKTG+GKTLAFGIP I V ++ S ++ P LVL+
Sbjct: 139 PIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMHVLKKNKKIGGGSKKVNPTCLVLS 198
Query: 187 PTRELAKQVEKEIKESAP--YLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNG 244
PTRELA Q+ ++E+ L ++CVYGG + Q +A+ GVD+V+GTPGR+ DL+
Sbjct: 199 PTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGVDIVIGTPGRLRDLIES 258
Query: 245 NSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRKYL 304
N LRL++V ++VLDEAD+ML +GFEE V IL RQ ++FSAT P V KL+++++
Sbjct: 259 NVLRLSDVSFVVLDEADRMLDMGFEEPVRFILSNTNKVRQMVMFSATWPLDVHKLAQEFM 318
Query: 305 N-KPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKT--IVFTRTKK 361
+ P+ + ++G + H + ++ L L+ Y K K +VF K
Sbjct: 319 DPNPIKV-IIGSVDLAANHDVMQIIEVLDERARDQRLIALLEKYHKSQKNRVLVFALYKV 377
Query: 362 DADEVSLSLTN-SIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDL 420
+A+ + L + ++HG+ +Q +R R+L+ F++G +LVATDVA+RGLDIP+V++
Sbjct: 378 EAERLERFLQQRGWKAVSIHGNKAQSERTRSLSLFKEGSCPLLVATDVAARGLDIPDVEV 437
Query: 421 VIHYELPNDPETFVHRSGRTGRAGKEGTAILMYT 454
VI+Y P E +VHR GRTGRAGK+G A +T
Sbjct: 438 VINYTFPLTTEDYVHRIGRTGRAGKKGVAHTFFT 471
>AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7286356-7288842
FORWARD LENGTH=828
Length = 828
Score = 228 bits (580), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 132/355 (37%), Positives = 210/355 (59%), Gaps = 13/355 (3%)
Query: 109 GLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDD 168
GL S+++ ++ PIQ L + G+D I AKTG+GKTL F +P+++ + D
Sbjct: 197 GLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKD- 255
Query: 169 SQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVCV--YGGVAYATQQNALSR 226
P +G P LV+APTREL +Q+ +I++ + L CV YGG A Q + L R
Sbjct: 256 --QPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKR 313
Query: 227 GVDVVVGTPGRIIDLVNGNSLRLTE---VQYLVLDEADQMLAVGFEEDVETILQTVPTGR 283
G ++VV TPGR+ID++ +S ++T V +LV+DEAD+M +GFE + I+Q + R
Sbjct: 314 GTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPER 373
Query: 284 QTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTM-LSD 342
QT+LFSAT P V+ L+RK LNKP+ I + G + + V S R + L +
Sbjct: 374 QTVLFSATFPRQVETLARKVLNKPVEIQVGGR---SVVNKDITQLVEVRPESDRFLRLLE 430
Query: 343 LVTVYAKGGKTIVFTRTKKDADEVSLSL-TNSIASEALHGDISQHQRERTLNGFRQGKFT 401
L+ +++ GK +VF ++++ D + + +S +LHG Q RE T++ F+
Sbjct: 431 LLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCN 490
Query: 402 VLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSN 456
+L+AT VA+RGLD+ ++LV++++ PN E +VHR GRTGRAG++G A+ + +
Sbjct: 491 LLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISED 545
>AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7285342-7288842
FORWARD LENGTH=1166
Length = 1166
Score = 227 bits (578), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 132/355 (37%), Positives = 208/355 (58%), Gaps = 13/355 (3%)
Query: 109 GLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDD 168
GL S+++ ++ PIQ L + G+D I AKTG+GKTL F +P+++ + D
Sbjct: 535 GLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKD- 593
Query: 169 SQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVCV--YGGVAYATQQNALSR 226
P +G P LV+APTREL +Q+ +I++ + L CV YGG A Q + L R
Sbjct: 594 --QPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKR 651
Query: 227 GVDVVVGTPGRIIDLV---NGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGR 283
G ++VV TPGR+ID++ +G L V +LV+DEAD+M +GFE + I+Q + R
Sbjct: 652 GTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPER 711
Query: 284 QTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTM-LSD 342
QT+LFSAT P V+ L+RK LNKP+ I + G + + V S R + L +
Sbjct: 712 QTVLFSATFPRQVETLARKVLNKPVEIQVGGR---SVVNKDITQLVEVRPESDRFLRLLE 768
Query: 343 LVTVYAKGGKTIVFTRTKKDADEVSLSL-TNSIASEALHGDISQHQRERTLNGFRQGKFT 401
L+ +++ GK +VF ++++ D + + +S +LHG Q RE T++ F+
Sbjct: 769 LLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCN 828
Query: 402 VLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSN 456
+L+AT VA+RGLD+ ++LV++++ PN E +VHR GRTGRAG++G A+ + +
Sbjct: 829 LLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISED 883
>AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14265679-14267880
REVERSE LENGTH=733
Length = 733
Score = 225 bits (573), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 138/368 (37%), Positives = 206/368 (55%), Gaps = 29/368 (7%)
Query: 110 LPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDS 169
L SEL++++ G PIQ A + L+ +D+I A+TG+GKT AF +P++ ++
Sbjct: 320 LTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYISRLP 379
Query: 170 QSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLS--TVCVYGGVAYATQQNALSRG 227
+ P A+V+APTRELA+Q+E+E + A YL + GG + Q +++G
Sbjct: 380 PMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEEQGLKITQG 439
Query: 228 VDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTG----- 282
++V+ TPGR+ID + L + Y+VLDEAD+M+ +GFE V +L +P+
Sbjct: 440 CEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVAGVLDAMPSSNLKPE 499
Query: 283 ------------RQTMLFSATMPGWVKKLSRKYLNKPL--TIDLVGEDEEKLAHGIKLYA 328
R T +FSATMP V++L+RKYL P+ TI G+ + ++ + +
Sbjct: 500 NEEEELDEKKIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTAGKTTDLISQHVIMMK 559
Query: 329 VSATTNSKRTMLSDLVTVYAKGGKT-IVFTRTKKDADEVSLSLTNS-IASEALHGDISQH 386
S + +L +L G KT IVF TKK+ D ++ +L + LHG SQ
Sbjct: 560 ESEKFFRLQKLLDEL------GEKTAIVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQE 613
Query: 387 QRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKE 446
QRE +L GFR ++ VLVATDV RG+DIP+V VI+Y++P E + HR GRTGRAGK
Sbjct: 614 QREISLEGFRAKRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIEMYTHRIGRTGRAGKS 673
Query: 447 GTAILMYT 454
G A T
Sbjct: 674 GVATSFLT 681
>AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:19429083-19431617
REVERSE LENGTH=760
Length = 760
Score = 224 bits (571), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 149/402 (37%), Positives = 214/402 (53%), Gaps = 18/402 (4%)
Query: 85 VNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDII 144
+ G+D+ P D G S+++ ++ + IQ L L G+D+I
Sbjct: 216 IRVSGFDVHRPVKTFED------CGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVI 269
Query: 145 ARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKE-SA 203
AKTG+GKT AF +P+I + D + QR G P ++ APTRELA Q+ E K+ S
Sbjct: 270 GIAKTGSGKTAAFVLPMIVHIMDQPEL-QRDEG--PIGVICAPTRELAHQIFLEAKKFSK 326
Query: 204 PY-LSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQ 262
Y L VYGG++ Q L G ++VV TPGR+ID++ +L + YLVLDEAD+
Sbjct: 327 AYGLRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADR 386
Query: 263 MLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPL--TIDLVGEDEEKL 320
M +GFE V +I+ + RQT+LFSATMP V+KL+R+ L+ P+ T+ VG E +
Sbjct: 387 MFDLGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAREILSDPIRVTVGEVGMANEDI 446
Query: 321 AHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSLT-NSIASEAL 379
+ + A K L + + G +VF K DE+ LT NS AL
Sbjct: 447 TQVVNVIPSDA---EKLPWLLEKLPGMIDEGDVLVFASKKATVDEIEAQLTLNSFKVAAL 503
Query: 380 HGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGR 439
HGD Q R TL F+ G VL+ATDVA+RGLDI ++ V++Y++ D + VHR GR
Sbjct: 504 HGDKDQASRMETLQKFKSGVHHVLIATDVAARGLDIKSLKTVVNYDIAKDMDMHVHRIGR 563
Query: 440 TGRAG-KEGTAILMYTSNQRRTVRSLEHDVGCKFEFVSPPAT 480
TGRAG ++G A + T + R L + + + V P T
Sbjct: 564 TGRAGDRDGVAYTLVTQREARFAGELVNSLVAAGQNVPPELT 605
>AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:27378040-27379593 REVERSE LENGTH=414
Length = 414
Score = 224 bits (571), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 138/368 (37%), Positives = 208/368 (56%), Gaps = 25/368 (6%)
Query: 108 LGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTD 167
+ L +L+R + G IQ+ ++P +G D+I +A++GTGKT F +++ +
Sbjct: 46 MELQPDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDI 105
Query: 168 DSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYL---STVCVYGGVAYATQQNAL 224
Q ALVLAPTRELA+Q+EK ++ YL + CV GG + Q L
Sbjct: 106 SLVQCQ--------ALVLAPTRELAQQIEKVMRALGDYLGVKAQACV-GGTSVREDQRVL 156
Query: 225 SRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQ 284
GV VVVGTPGR+ DL+ SLR ++ VLDEAD+ML+ GF++ + I Q +P+ Q
Sbjct: 157 QSGVHVVVGTPGRVFDLLRRQSLRADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQ 216
Query: 285 TMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNS-KRTMLSDL 343
+FSATMP +++RK++NKP+ I LV DE L GIK + V+ K L DL
Sbjct: 217 VGVFSATMPPEALEITRKFMNKPVRI-LVKRDELTL-EGIKQFYVNVDKEEWKLETLCDL 274
Query: 344 VTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASE-----ALHGDISQHQRERTLNGFRQG 398
A ++++F T++ D LT+ + S A HGD+ Q+ R+ + FR G
Sbjct: 275 YETLAI-TQSVIFVNTRRKVD----WLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSG 329
Query: 399 KFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQR 458
VL+ TD+ +RG+D+ V LVI+++LP PE ++HR GR+GR G++G AI TS
Sbjct: 330 SSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFMTSEDE 389
Query: 459 RTVRSLEH 466
R + ++
Sbjct: 390 RMMADIQR 397
>AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594128 REVERSE
LENGTH=412
Length = 412
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 138/367 (37%), Positives = 208/367 (56%), Gaps = 25/367 (6%)
Query: 108 LGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTD 167
+GL L+R + G IQ+ +VP +G D+I +A++GTGKT F +++ +
Sbjct: 44 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQL-- 101
Query: 168 DSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLST---VCVYGGVAYATQQNAL 224
D Q +ALVLAPTRELA+Q+EK ++ YL CV GG + Q L
Sbjct: 102 DFSLIQ------CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRIL 154
Query: 225 SRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQ 284
GV VVVGTPGR+ D++ SLR ++ VLDEAD+ML+ GF++ + I Q +P Q
Sbjct: 155 QAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQ 214
Query: 285 TMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNS-KRTMLSDL 343
+FSATMP +++RK+++KP+ I LV DE L GIK + V+ K L DL
Sbjct: 215 VGVFSATMPPEALEITRKFMSKPVRI-LVKRDELTL-EGIKQFYVNVEKEEWKLETLCDL 272
Query: 344 VTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASE-----ALHGDISQHQRERTLNGFRQG 398
A ++++F T++ D LT+ + S A HGD+ Q+ R+ + FR G
Sbjct: 273 YETLAI-TQSVIFVNTRRKVD----WLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSG 327
Query: 399 KFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQR 458
VL+ TD+ +RG+D+ V LVI+++LP PE ++HR GR+GR G++G AI T +
Sbjct: 328 SSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDE 387
Query: 459 RTVRSLE 465
R + ++
Sbjct: 388 RMLFDIQ 394
>AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592586-4594128 REVERSE
LENGTH=415
Length = 415
Score = 221 bits (563), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 137/363 (37%), Positives = 204/363 (56%), Gaps = 25/363 (6%)
Query: 108 LGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTD 167
+GL L+R + G IQ+ +VP +G D+I +A++GTGKT F +++ +
Sbjct: 44 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDF 103
Query: 168 DSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLST---VCVYGGVAYATQQNAL 224
Q ALVLAPTRELA+Q+EK ++ YL CV GG + Q L
Sbjct: 104 SLIQCQ--------ALVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRIL 154
Query: 225 SRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQ 284
GV VVVGTPGR+ D++ SLR ++ VLDEAD+ML+ GF++ + I Q +P Q
Sbjct: 155 QAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQ 214
Query: 285 TMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNS-KRTMLSDL 343
+FSATMP +++RK+++KP+ I LV DE L GIK + V+ K L DL
Sbjct: 215 VGVFSATMPPEALEITRKFMSKPVRI-LVKRDELTL-EGIKQFYVNVEKEEWKLETLCDL 272
Query: 344 VTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASE-----ALHGDISQHQRERTLNGFRQG 398
A ++++F T++ D LT+ + S A HGD+ Q+ R+ + FR G
Sbjct: 273 YETLAI-TQSVIFVNTRRKVD----WLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSG 327
Query: 399 KFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQR 458
VL+ TD+ +RG+D+ V LVI+++LP PE ++HR GR+GR G++G AI T +
Sbjct: 328 SSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDE 387
Query: 459 RTV 461
R +
Sbjct: 388 RML 390
>AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594094 REVERSE
LENGTH=402
Length = 402
Score = 221 bits (563), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 138/367 (37%), Positives = 208/367 (56%), Gaps = 25/367 (6%)
Query: 108 LGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTD 167
+GL L+R + G IQ+ +VP +G D+I +A++GTGKT F +++ +
Sbjct: 34 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQL-- 91
Query: 168 DSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLST---VCVYGGVAYATQQNAL 224
D Q +ALVLAPTRELA+Q+EK ++ YL CV GG + Q L
Sbjct: 92 DFSLIQ------CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRIL 144
Query: 225 SRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQ 284
GV VVVGTPGR+ D++ SLR ++ VLDEAD+ML+ GF++ + I Q +P Q
Sbjct: 145 QAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQ 204
Query: 285 TMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNS-KRTMLSDL 343
+FSATMP +++RK+++KP+ I LV DE L GIK + V+ K L DL
Sbjct: 205 VGVFSATMPPEALEITRKFMSKPVRI-LVKRDELTL-EGIKQFYVNVEKEEWKLETLCDL 262
Query: 344 VTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASE-----ALHGDISQHQRERTLNGFRQG 398
A ++++F T++ D LT+ + S A HGD+ Q+ R+ + FR G
Sbjct: 263 YETLAI-TQSVIFVNTRRKVD----WLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSG 317
Query: 399 KFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQR 458
VL+ TD+ +RG+D+ V LVI+++LP PE ++HR GR+GR G++G AI T +
Sbjct: 318 SSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDE 377
Query: 459 RTVRSLE 465
R + ++
Sbjct: 378 RMLFDIQ 384
>AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor
4A-III | chr3:6863790-6866242 FORWARD LENGTH=408
Length = 408
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 136/409 (33%), Positives = 222/409 (54%), Gaps = 23/409 (5%)
Query: 63 VATPNSSVLTAEEAFKGLALDDVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRG 122
+AT N + D + + D P T ND +G+ +++R + G
Sbjct: 1 MATANPGRGGGRRGGGAMDDDKLVFETTDGIEPITSFND------MGIKEDVLRGVYEYG 54
Query: 123 ITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKA 182
IQ+ ++P L+G+D+IA+A++GTGKT + + + V S+ Q A
Sbjct: 55 FEKPSAIQQRAVMPILQGRDVIAQAQSGTGKTSMIALSVCQVVDTSSREVQ--------A 106
Query: 183 LVLAPTRELAKQVEKEIKE---SAPYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRII 239
L+L+PTRELA Q EK I+ A + C+ GG + L GV VV GTPGR+
Sbjct: 107 LILSPTRELATQTEKTIQAIGLHANIQAHACI-GGNSVGEDIRKLEHGVHVVSGTPGRVC 165
Query: 240 DLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKL 299
D++ SLR ++ L+LDE+D+ML+ GF++ + + + +P Q L SAT+P + ++
Sbjct: 166 DMIKRRSLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPDLQVCLVSATLPHEILEM 225
Query: 300 SRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNS-KRTMLSDLVTVYAKGGKTIVFTR 358
+ K++ +P+ I LV DE L GIK + V+ K L DL + ++F
Sbjct: 226 TSKFMTEPVKI-LVKRDELTL-EGIKQFFVAVEKEEWKFDTLCDLYDTLTIT-QAVIFCN 282
Query: 359 TKKDADEVSLSL-TNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPN 417
TK+ D +S + +++ ++HGD+ Q +R+ +N FR G VL+ TDV +RG+D+
Sbjct: 283 TKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDSRVLITTDVWARGIDVQQ 342
Query: 418 VDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSLEH 466
V LVI+Y+LPN+ E ++HR GR+GR G++G AI S+ + +R +E
Sbjct: 343 VSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQ 391
>AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:16069669-16071405 REVERSE LENGTH=542
Length = 542
Score = 218 bits (556), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 139/396 (35%), Positives = 211/396 (53%), Gaps = 28/396 (7%)
Query: 85 VNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDII 144
+ +G D+ PP D + PS L+R L ++GI PIQ L L G+D+I
Sbjct: 85 ITVNGEDIPPPIKNFMD------MKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMI 138
Query: 145 ARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQ--------VE 196
A TG+GKTL F +P+I + +G P ALV+ P+RELAKQ V
Sbjct: 139 GIAFTGSGKTLVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVA 198
Query: 197 KEIKESAPYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLV 256
+++ P L ++ GGV +Q + + +GV +VV TPGR+ D++ + L + L
Sbjct: 199 SLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLT 258
Query: 257 LDEADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGED 316
LDEAD+++ +GFE+D+ + + RQT+LFSATMP ++ + L KP+T++ VG
Sbjct: 259 LDEADRLVDLGFEDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVN-VGR- 316
Query: 317 EEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKT----IVFTRTKKDADEV-SLSLT 371
A L + K+ + +V + KT ++F K D D++ L
Sbjct: 317 ----AGAANLDVIQEVEYVKQE--AKIVYLLECLQKTTPPVLIFCENKADVDDIHEYLLL 370
Query: 372 NSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPE 431
+ + A+HG Q R+ ++ F+ GK VLVATDVAS+GLD P++ VI+Y++P + E
Sbjct: 371 KGVEAVAIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIE 430
Query: 432 TFVHRSGRTGRAGKEGTAILMYTSNQRR-TVRSLEH 466
+VHR GRTGR GK G A NQ T+ L+H
Sbjct: 431 NYVHRIGRTGRCGKTGIATTFINKNQSEITLLDLKH 466
>AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:19047960-19049967 FORWARD LENGTH=392
Length = 392
Score = 218 bits (554), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 130/372 (34%), Positives = 210/372 (56%), Gaps = 21/372 (5%)
Query: 108 LGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTD 167
+G+ +++R + + G IQ+ LVP L+G+D+IA+A++GTGKT I + + V
Sbjct: 27 MGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKTSMIAISVCQIVNI 86
Query: 168 DSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLST---VCVYGGVAYATQQNAL 224
S+ Q LVL+P+RELA Q EK I+ + + C+ GG + L
Sbjct: 87 SSRKVQ--------VLVLSPSRELASQTEKTIQAIGAHTNIQAHACI-GGKSIGEDIKKL 137
Query: 225 SRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQ 284
RGV V GTPGR+ D++ SL+ V+ LVLDE+D+ML+ G ++ + + + +P Q
Sbjct: 138 ERGVHAVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSKGLKDQIYDVYRALPHDIQ 197
Query: 285 TMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLV 344
L SAT+P + +++ K++ P+ I LV DE L GIK Y V + + L
Sbjct: 198 VCLISATLPQEILEMTEKFMTDPVRI-LVKPDELTL-EGIKQYYVDV--DKEEWKFDTLC 253
Query: 345 TVYAK--GGKTIVFTRTKKDADEVSLSL--TNSIASEALHGDISQHQRERTLNGFRQGKF 400
+Y + + I+F T++ D ++ + +N I S ++HGD Q +R+ +N FR K
Sbjct: 254 DLYGRLTINQAIIFCNTRQKVDWLTEKMRSSNFIVS-SMHGDKRQKERDDIMNQFRSFKS 312
Query: 401 TVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRT 460
VL+A+DV +RG+D+ V VI+Y++PN+PE ++HR GR GR G+EG AI S+ +
Sbjct: 313 RVLIASDVWARGIDVQTVSHVINYDIPNNPELYIHRIGRAGRFGREGVAINFVKSSDMKD 372
Query: 461 VRSLEHDVGCKF 472
++ +E G K
Sbjct: 373 LKDIERHYGTKI 384
>AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative |
chr5:20841456-20843645 FORWARD LENGTH=591
Length = 591
Score = 217 bits (552), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 132/385 (34%), Positives = 203/385 (52%), Gaps = 25/385 (6%)
Query: 88 DGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARA 147
+G D+ PP D + P ++ +L +GI PIQ L L G+D+I A
Sbjct: 137 NGDDIPPPIKNFKD------MKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIA 190
Query: 148 KTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESA---- 203
TG+GKTL F +P+I + +G P L++ P+RELA+Q + +++
Sbjct: 191 FTGSGKTLVFVLPMIMIALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEVVEQFVAPLV 250
Query: 204 -----PYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLD 258
P S +C+ GG+ +Q + RGV +VV TPGR+ D++ + L +YL LD
Sbjct: 251 EAGYPPLRSLLCI-GGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLTLD 309
Query: 259 EADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEE 318
EAD+++ +GFE+D+ + + RQT+LFSATMP ++ +R L KP+T++ VG
Sbjct: 310 EADRLVDLGFEDDIREVFDHFKSQRQTLLFSATMPTKIQIFARSALVKPVTVN-VGR--- 365
Query: 319 KLAHGIKLYAVSATTNSKR--TMLSDLVTVYAKGGKTIVFTRTKKDADEV-SLSLTNSIA 375
A L + K+ ++ L + ++F K D D++ L +
Sbjct: 366 --AGAANLDVIQEVEYVKQEAKIVYLLECLQKTSPPVLIFCENKADVDDIHEYLLLKGVE 423
Query: 376 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVH 435
+ A+HG Q RE ++ F+ GK VLVATDVAS+GLD P++ VI+Y++P + E +VH
Sbjct: 424 AVAIHGGKDQEDREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVH 483
Query: 436 RSGRTGRAGKEGTAILMYTSNQRRT 460
R GRTGR GK G A NQ T
Sbjct: 484 RIGRTGRCGKTGIATTFINKNQSET 508
>AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiation
factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=407
Length = 407
Score = 216 bits (551), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 138/367 (37%), Positives = 207/367 (56%), Gaps = 30/367 (8%)
Query: 108 LGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTD 167
+GL L+R G IQ+ +VP +G D+I +A++GTGKT F +++ +
Sbjct: 44 MGLQENLLR-----GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQL-- 96
Query: 168 DSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLST---VCVYGGVAYATQQNAL 224
D Q +ALVLAPTRELA+Q+EK ++ YL CV GG + Q L
Sbjct: 97 DFSLIQ------CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRIL 149
Query: 225 SRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQ 284
GV VVVGTPGR+ D++ SLR ++ VLDEAD+ML+ GF++ + I Q +P Q
Sbjct: 150 QAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQ 209
Query: 285 TMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNS-KRTMLSDL 343
+FSATMP +++RK+++KP+ I LV DE L GIK + V+ K L DL
Sbjct: 210 VGVFSATMPPEALEITRKFMSKPVRI-LVKRDELTL-EGIKQFYVNVEKEEWKLETLCDL 267
Query: 344 VTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASE-----ALHGDISQHQRERTLNGFRQG 398
A ++++F T++ D LT+ + S A HGD+ Q+ R+ + FR G
Sbjct: 268 YETLAI-TQSVIFVNTRRKVD----WLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSG 322
Query: 399 KFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQR 458
VL+ TD+ +RG+D+ V LVI+++LP PE ++HR GR+GR G++G AI T +
Sbjct: 323 SSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDE 382
Query: 459 RTVRSLE 465
R + ++
Sbjct: 383 RMLFDIQ 389
>AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=412
Length = 412
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 137/367 (37%), Positives = 209/367 (56%), Gaps = 25/367 (6%)
Query: 108 LGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTD 167
+GL L+R + G IQ+ +VP +G D+I +A++GTGKT F +++ +
Sbjct: 44 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQL-- 101
Query: 168 DSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLST---VCVYGGVAYATQQNAL 224
D Q +ALVLAPTRELA+Q+EK ++ Y CV GG + Q L
Sbjct: 102 DYALLQ------CQALVLAPTRELAQQIEKVMRALGDYQGVKVHACV-GGTSVREDQRIL 154
Query: 225 SRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQ 284
GV VVVGTPGR+ D++ SLR ++ VLDEAD+ML+ GF++ + I Q +P Q
Sbjct: 155 QAGVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQ 214
Query: 285 TMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSA-TTNSKRTMLSDL 343
+FSATMP +++RK+++KP+ I LV DE L GIK + V+ + K L DL
Sbjct: 215 VGVFSATMPPEALEITRKFMSKPVRI-LVKRDELTL-EGIKQFYVNVEKEDWKLETLCDL 272
Query: 344 VTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASE-----ALHGDISQHQRERTLNGFRQG 398
A ++++F T++ D LT+ + S A HGD+ Q+ R+ + FR G
Sbjct: 273 YETLAI-TQSVIFVNTRRKVD----WLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSG 327
Query: 399 KFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQR 458
VL+ TD+ +RG+D+ V LVI+++LP PE ++HR GR+GR G++G AI T + +
Sbjct: 328 SSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDQ 387
Query: 459 RTVRSLE 465
R + ++
Sbjct: 388 RMLFDIQ 394
>AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2949152-2952205
REVERSE LENGTH=989
Length = 989
Score = 212 bits (540), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 127/354 (35%), Positives = 198/354 (55%), Gaps = 40/354 (11%)
Query: 109 GLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDD 168
GL S+++ +L PIQ L + G+D I AKTG+GKTL F +P+++ + D
Sbjct: 402 GLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKD- 460
Query: 169 SQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVCV--YGGVAYATQQNALSR 226
P +G P LV+APTREL +Q+ +I++ + L +CV YGG A Q + L R
Sbjct: 461 --QPPVEAGDGPIGLVMAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQISELKR 518
Query: 227 GVDVVVGTPGRIIDLV---NGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGR 283
G ++VV TPGR+ID++ +G L V YLV+DEAD+M +GFE + I+Q + R
Sbjct: 519 GTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDR 578
Query: 284 QTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKR-TMLSD 342
QT+LFSAT P V+ L+RK LNKP+ I + G + + V S+R + L +
Sbjct: 579 QTVLFSATFPRQVETLARKVLNKPVEIQVGG---RSVVNKDITQLVEIRPESERFSRLLE 635
Query: 343 LVTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASEALHGDISQHQRERTLNGFRQGKFTV 402
L+ + + GK +VF R++ E++++ F+ +
Sbjct: 636 LLGEWYEKGKVLVFVRSQ----------------------------EKSISDFKSDVCNL 667
Query: 403 LVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSN 456
L+AT VA+RGLD+ ++LV++++ PN E +VHR GRTGRAG++G A+ + +
Sbjct: 668 LIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISED 721
>AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=407
Length = 407
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 137/367 (37%), Positives = 208/367 (56%), Gaps = 30/367 (8%)
Query: 108 LGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTD 167
+GL L+R G IQ+ +VP +G D+I +A++GTGKT F +++ +
Sbjct: 44 MGLQENLLR-----GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQL-- 96
Query: 168 DSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLST---VCVYGGVAYATQQNAL 224
D Q +ALVLAPTRELA+Q+EK ++ Y CV GG + Q L
Sbjct: 97 DYALLQ------CQALVLAPTRELAQQIEKVMRALGDYQGVKVHACV-GGTSVREDQRIL 149
Query: 225 SRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQ 284
GV VVVGTPGR+ D++ SLR ++ VLDEAD+ML+ GF++ + I Q +P Q
Sbjct: 150 QAGVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQ 209
Query: 285 TMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSA-TTNSKRTMLSDL 343
+FSATMP +++RK+++KP+ I LV DE L GIK + V+ + K L DL
Sbjct: 210 VGVFSATMPPEALEITRKFMSKPVRI-LVKRDELTL-EGIKQFYVNVEKEDWKLETLCDL 267
Query: 344 VTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASE-----ALHGDISQHQRERTLNGFRQG 398
A ++++F T++ D LT+ + S A HGD+ Q+ R+ + FR G
Sbjct: 268 YETLAI-TQSVIFVNTRRKVD----WLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSG 322
Query: 399 KFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQR 458
VL+ TD+ +RG+D+ V LVI+++LP PE ++HR GR+GR G++G AI T + +
Sbjct: 323 SSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDQ 382
Query: 459 RTVRSLE 465
R + ++
Sbjct: 383 RMLFDIQ 389
>AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:24546601-24549148 REVERSE LENGTH=456
Length = 456
Score = 210 bits (535), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 142/402 (35%), Positives = 220/402 (54%), Gaps = 21/402 (5%)
Query: 105 ISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKG 164
++LG+ ELV++ G + IQ L ALEGKD+I A+TG+GKT AF IPI++
Sbjct: 11 FAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQA 70
Query: 165 VTDDSQSPQRRSGRLPK----ALVLAPTRELAKQVEKEIKESAPYLSTVC--VYGGVAYA 218
+ + + + GR P A VL+PTRELA Q+ ++ + +S C + GG+
Sbjct: 71 LLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDRM 130
Query: 219 TQQNALSRGVDVVVGTPGRIID-LVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQ 277
Q AL + V+V TPGR+ D + + L ++YLVLDEAD++L FE+ + IL+
Sbjct: 131 QQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQILE 190
Query: 278 TVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDE--EKLAHGIKLYAVSATTNS 335
+P R+T LFSATM V+KL R L P+ I+ + + L + A
Sbjct: 191 EIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYRFVAAKYKDCY 250
Query: 336 KRTMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASEAL--HGDISQHQRERTLN 393
+LS++ +++FTRT ++L L S+ A+ G ++Q +R LN
Sbjct: 251 LVYILSEMPE-----STSMIFTRTCDGTRFLALVL-RSLGFRAIPISGQMTQSKRLGALN 304
Query: 394 GFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMY 453
F+ G+ +LV TDVASRGLDIP+VD+VI+Y++P + + ++HR GRT RAG+ G I +
Sbjct: 305 KFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLV 364
Query: 454 TSNQRRTVRSLEHDVGCKF-EFVSPPATQEILESSAEQVVAA 494
+ +E +G K E+ PA ++ + S E+V A
Sbjct: 365 NQYELEWYIQIEKLIGKKLPEY---PAEEDEVLSLLERVAEA 403
>AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:9362176-9366449 REVERSE LENGTH=789
Length = 789
Score = 209 bits (533), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 149/427 (34%), Positives = 225/427 (52%), Gaps = 24/427 (5%)
Query: 107 KLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVT 166
+L L L+R+ G PIQ A + AL G+D+ A A TG+GKT AF +P ++ +
Sbjct: 171 ELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLERLL 230
Query: 167 DDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVC--VYGGVAYATQQNAL 224
P+R + L+L PTRELA Q+ I+ A + C + GG++ Q+ L
Sbjct: 231 ---FRPKRVFA--TRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVL 285
Query: 225 SRGVDVVVGTPGRIID-LVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGR 283
D+VV TPGR+ID L N S+ L ++ L+LDEAD++L GF ++ +++ P R
Sbjct: 286 RSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRR 345
Query: 284 QTMLFSATMPGWVKKLSRKYLNKPLTI--DLVGEDEEKLAHGIKLYAVSATTNSKRTMLS 341
QTMLFSATM VK+L + LNKPL + D L + + N + +LS
Sbjct: 346 QTMLFSATMTEEVKELVKLSLNKPLRLSADPSARRPPGLTEEVVRIRRTREANQEAVLLS 405
Query: 342 DLVTVYAKGGKTIVFTRTKKDADEVSL--SLTNSIASEALHGDISQHQRERTLNGFRQGK 399
+ K I+F+ TK+ A + + L A+E LHG+++Q QR +L FR+ +
Sbjct: 406 LCTRTFK--SKVIIFSGTKQAAHRLKILFGLAGLKAAE-LHGNLTQAQRLDSLELFRKQE 462
Query: 400 FTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRR 459
L+ATDVA+RGLDI V VI+Y P + +++VHR GRT RAG+EG A+ T + R
Sbjct: 463 VDFLIATDVAARGLDIIGVQTVINYACPREIDSYVHRVGRTARAGREGYAVTFVTDSDRS 522
Query: 460 TVRSLEHDVGCKFEFVSPPAT-----QEILESSAEQVVAALSRVHPE----SVEFFTATA 510
++ + VG K + P +I++ +Q A +S E E A A
Sbjct: 523 LLKVIAKKVGSKLKSRVIPEQSIVKWSQIIDEMEDQYSAVISAERDERALRKAEMEFAKA 582
Query: 511 QKLVEER 517
+ ++E R
Sbjct: 583 ENMLEHR 589
>AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 |
chr1:5568482-5570487 REVERSE LENGTH=491
Length = 491
Score = 206 bits (523), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 141/416 (33%), Positives = 215/416 (51%), Gaps = 48/416 (11%)
Query: 95 PTTVSNDELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKT 154
P++ + + LGL V + G+ P+Q + L G+D++ A+TG+GKT
Sbjct: 50 PSSDTTSATNFEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKT 109
Query: 155 LAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVC--VY 212
AF +PI+ + +D ALV+ PTRELA Q+ ++ K L+ C +
Sbjct: 110 AAFALPILHRLAEDPYGVF--------ALVVTPTRELAFQLAEQFKALGSCLNLRCSVIV 161
Query: 213 GGVAYATQQNALSRGVDVVVGTPGRIIDLVNGNS---LRLTEVQYLVLDEADQMLAVGFE 269
GG+ TQ +L +V+ TPGRI L+ N + ++LVLDEAD++L VGF+
Sbjct: 162 GGMDMLTQTMSLVSRPHIVITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQ 221
Query: 270 EDVETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKP--------------LTIDLVGE 315
+++ TI Q +P RQT+LFSATM ++ L NK LT + E
Sbjct: 222 DELRTIFQCLPKSRQTLLFSATMTSNLQALLEHSSNKAYFYEAYEGLKTVDTLTQQFIFE 281
Query: 316 DEEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKT-IVFTRTKKDADEVSLSLTN-S 373
D++ +LY V L + KG ++ ++F T + +SL L
Sbjct: 282 DKD----AKELYLVHI-----------LSQMEDKGIRSAMIFVSTCRTCQRLSLMLDELE 326
Query: 374 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETF 433
+ + A+H SQ R L+ F+ GK +L+ATDVASRGLDIP VDLVI+Y++P DP +
Sbjct: 327 VENIAMHSLNSQSMRLSALSKFKSGKVPILLATDVASRGLDIPTVDLVINYDIPRDPRDY 386
Query: 434 VHRSGRTGRAGKEGTAILMYTSNQRRTVRSLEHDVGCKFEFVSPPATQEILESSAE 489
VHR GRT RAG+ G A+ + T + + +E +VG K E P ++++ S E
Sbjct: 387 VHRVGRTARAGRGGLAVSIITETDVKLIHKIEEEVGKKME----PYNKKVITDSLE 438
>AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 204 bits (518), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 125/379 (32%), Positives = 201/379 (53%), Gaps = 19/379 (5%)
Query: 110 LPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDS 169
L EL+ + +G PIQ + AL G+DI+ARAK GTGKT AF IP+++ + D+
Sbjct: 138 LKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEKIDQDN 197
Query: 170 QSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYL--STVCVYGGVAYATQQNALSRG 227
Q A+++ PTRELA Q + KE +L + GG + L +
Sbjct: 198 NVIQ--------AVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQP 249
Query: 228 VDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTML 287
V ++VGTPGRI+DL L + LV+DEAD++L+ F+ VE ++ +P RQ ++
Sbjct: 250 VHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESRQILM 309
Query: 288 FSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVY 347
FSAT P VK ++L P I+L+ DE L + YA +R + L T++
Sbjct: 310 FSATFPVTVKDFKDRFLTNPYVINLM--DELTLKGITQFYAFV----EERQKIHCLNTLF 363
Query: 348 AK--GGKTIVFTRTKKDADEVSLSLTN-SIASEALHGDISQHQRERTLNGFRQGKFTVLV 404
+K ++I+F + + ++ +T + +H + Q R R + FR G LV
Sbjct: 364 SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLV 423
Query: 405 ATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSL 464
TD+ +RG+DI V++VI+++ P + ET++HR GR+GR G G A+ + T R + +
Sbjct: 424 CTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRI 483
Query: 465 EHDVGCKFEFVSPPATQEI 483
E ++G + + + P Q I
Sbjct: 484 EQELGTEIKQIPPHIDQAI 502
>AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 204 bits (518), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 125/379 (32%), Positives = 201/379 (53%), Gaps = 19/379 (5%)
Query: 110 LPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDS 169
L EL+ + +G PIQ + AL G+DI+ARAK GTGKT AF IP+++ + D+
Sbjct: 138 LKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEKIDQDN 197
Query: 170 QSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYL--STVCVYGGVAYATQQNALSRG 227
Q A+++ PTRELA Q + KE +L + GG + L +
Sbjct: 198 NVIQ--------AVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQP 249
Query: 228 VDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTML 287
V ++VGTPGRI+DL L + LV+DEAD++L+ F+ VE ++ +P RQ ++
Sbjct: 250 VHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESRQILM 309
Query: 288 FSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVY 347
FSAT P VK ++L P I+L+ DE L + YA +R + L T++
Sbjct: 310 FSATFPVTVKDFKDRFLTNPYVINLM--DELTLKGITQFYAFV----EERQKIHCLNTLF 363
Query: 348 AK--GGKTIVFTRTKKDADEVSLSLTN-SIASEALHGDISQHQRERTLNGFRQGKFTVLV 404
+K ++I+F + + ++ +T + +H + Q R R + FR G LV
Sbjct: 364 SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLV 423
Query: 405 ATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSL 464
TD+ +RG+DI V++VI+++ P + ET++HR GR+GR G G A+ + T R + +
Sbjct: 424 CTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRI 483
Query: 465 EHDVGCKFEFVSPPATQEI 483
E ++G + + + P Q I
Sbjct: 484 EQELGTEIKQIPPHIDQAI 502
>AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:18859836-18862318 FORWARD LENGTH=528
Length = 528
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 196/365 (53%), Gaps = 19/365 (5%)
Query: 110 LPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDS 169
L +L+R + +G PIQ + AL G DI+ARAK GTGKT AF IP ++ + ++
Sbjct: 161 LKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTLEKIDPEN 220
Query: 170 QSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLS--TVCVYGGVAYATQQNALSRG 227
Q A++L PTRELA Q + KE + YL + GG + L +
Sbjct: 221 NVIQ--------AVILVPTRELALQTSQVCKELSKYLKIEVMVTTGGTSLRDDIMRLYQP 272
Query: 228 VDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTML 287
V ++VGTPGRI+DL L + LV+DEAD++L+V F+ +E ++Q +P RQ ++
Sbjct: 273 VHLLVGTPGRILDLAKKGVCVLKDCAMLVMDEADKLLSVEFQPSIEELIQFLPESRQILM 332
Query: 288 FSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVY 347
FSAT P VK +YL KP I+L+ D+ L + YA +R + L T++
Sbjct: 333 FSATFPVTVKSFKDRYLKKPYIINLM--DQLTLMGVTQYYAFV----EERQKVHCLNTLF 386
Query: 348 AK--GGKTIVFTRTKKDADEVSLSLTN-SIASEALHGDISQHQRERTLNGFRQGKFTVLV 404
+K ++I+F + + ++ +T + +H + Q R R + FR G LV
Sbjct: 387 SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHDFRNGACRNLV 446
Query: 405 ATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSL 464
TD+ +RG+DI V++VI+++ P E+++HR GR+GR G G A+ + T R +
Sbjct: 447 CTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQT 506
Query: 465 EHDVG 469
E ++G
Sbjct: 507 EQELG 511
>AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25319798-25322071
REVERSE LENGTH=484
Length = 484
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 121/354 (34%), Positives = 189/354 (53%), Gaps = 13/354 (3%)
Query: 63 VATPNSSVLTAEEAFKGLALDDVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRG 122
V +P +T ++ D++ +G D+ P + D P ++ ++ G
Sbjct: 131 VESPTVQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDA------NFPDNILEAIAKLG 184
Query: 123 ITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKA 182
T PIQ AL+G+D+I A+TG+GKTLA+ +P + V S P+ P
Sbjct: 185 FTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHV---SAQPRLGQDDGPIV 241
Query: 183 LVLAPTRELAKQVEKEIKESA--PYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIID 240
L+LAPTRELA Q+++E ++ + + C+YGG Q L RGV++V+ TPGR+ID
Sbjct: 242 LILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLID 301
Query: 241 LVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLS 300
++ L V YLVLDEAD+ML +GFE + I+ + RQT+L+SAT P V+ L+
Sbjct: 302 MLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLA 361
Query: 301 RKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTK 360
R++L P ++G + K I T K L L+ G K ++F TK
Sbjct: 362 RQFLRDPYKA-IIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETK 420
Query: 361 KDADEVSLSL-TNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGL 413
+ D+V+ L + + A+HGD +Q +R+R L F+ G+ ++ ATDVA+RGL
Sbjct: 421 RGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGL 474
>AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/365 (33%), Positives = 197/365 (53%), Gaps = 19/365 (5%)
Query: 110 LPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDS 169
L +L++ + +G PIQ + AL G DI+ARAK GTGKT AF IP+++ + ++
Sbjct: 131 LKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEKIDPNN 190
Query: 170 QSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLS--TVCVYGGVAYATQQNALSRG 227
Q A++L PTRELA Q + KE + YL+ + GG + L +
Sbjct: 191 NVIQ--------AMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQP 242
Query: 228 VDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTML 287
V ++VGTPGRI+DL L + LV+DEAD++L+ F+ +E ++Q +P RQ ++
Sbjct: 243 VHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQNRQFLM 302
Query: 288 FSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVY 347
FSAT P VK ++L KP I+L+ D+ L + YA +R + L T++
Sbjct: 303 FSATFPVTVKAFKDRHLRKPYVINLM--DQLTLMGVTQYYAFV----EERQKVHCLNTLF 356
Query: 348 AK--GGKTIVFTRTKKDADEVSLSLTN-SIASEALHGDISQHQRERTLNGFRQGKFTVLV 404
+K ++I+F + + ++ +T + +H + Q R R + FR G LV
Sbjct: 357 SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLV 416
Query: 405 ATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSL 464
TD+ +RG+DI V++VI+++ P E+++HR GR+GR G G A+ + T R +
Sbjct: 417 CTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQT 476
Query: 465 EHDVG 469
E ++G
Sbjct: 477 EQELG 481
>AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/365 (33%), Positives = 197/365 (53%), Gaps = 19/365 (5%)
Query: 110 LPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDS 169
L +L++ + +G PIQ + AL G DI+ARAK GTGKT AF IP+++ + ++
Sbjct: 131 LKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEKIDPNN 190
Query: 170 QSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLS--TVCVYGGVAYATQQNALSRG 227
Q A++L PTRELA Q + KE + YL+ + GG + L +
Sbjct: 191 NVIQ--------AMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQP 242
Query: 228 VDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTML 287
V ++VGTPGRI+DL L + LV+DEAD++L+ F+ +E ++Q +P RQ ++
Sbjct: 243 VHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQNRQFLM 302
Query: 288 FSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVY 347
FSAT P VK ++L KP I+L+ D+ L + YA +R + L T++
Sbjct: 303 FSATFPVTVKAFKDRHLRKPYVINLM--DQLTLMGVTQYYAFV----EERQKVHCLNTLF 356
Query: 348 AK--GGKTIVFTRTKKDADEVSLSLTN-SIASEALHGDISQHQRERTLNGFRQGKFTVLV 404
+K ++I+F + + ++ +T + +H + Q R R + FR G LV
Sbjct: 357 SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLV 416
Query: 405 ATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSL 464
TD+ +RG+DI V++VI+++ P E+++HR GR+GR G G A+ + T R +
Sbjct: 417 CTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQT 476
Query: 465 EHDVG 469
E ++G
Sbjct: 477 EQELG 481
>AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases | chr1:28947887-28951526 REVERSE
LENGTH=845
Length = 845
Score = 192 bits (489), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 123/352 (34%), Positives = 199/352 (56%), Gaps = 13/352 (3%)
Query: 108 LGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTD 167
L L + ++ +G PIQR + L G D++A A+TG+GKT AF IP+++ +
Sbjct: 33 LNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEKLK- 91
Query: 168 DSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPY--LSTVCVYGGVAYATQQNALS 225
PQ G + +AL+L+PTR+LA+Q K KE + L + GG + Q L+
Sbjct: 92 -QHVPQ---GGV-RALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEELT 146
Query: 226 RGVDVVVGTPGRIIDLVNG-NSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQ 284
+G DV++ TPGR++ L++ + + L V+Y+V DEAD + +GF E + IL + RQ
Sbjct: 147 KGPDVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQILTQLSENRQ 206
Query: 285 TMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLV 344
T+LFSAT+P + + ++ L +P + L + E K++ +KL ++ K + L LV
Sbjct: 207 TLLFSATLPSALAEFAKAGLREPQLVRL--DVENKISPDLKLSFLTVRPEEKYSALLYLV 264
Query: 345 TVY-AKGGKTIVFTRTKKDADEV-SLSLTNSIASEALHGDISQHQRERTLNGFRQGKFTV 402
+ + +T++F TK + V SL +I +GD+ Q R+ ++ FR K +
Sbjct: 265 REHISSDQQTLIFVSTKHHVEFVNSLFKLENIEPSVCYGDMDQDARKIHVSRFRARKTML 324
Query: 403 LVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYT 454
L+ TD+A+RG+DIP +D VI+++ P P+ FVHR GR RAG+ G A T
Sbjct: 325 LIVTDIAARGIDIPLLDNVINWDFPPRPKIFVHRVGRAARAGRTGCAYSFVT 376
>AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6399724-6403007
REVERSE LENGTH=568
Length = 568
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/377 (33%), Positives = 205/377 (54%), Gaps = 19/377 (5%)
Query: 96 TTVSNDELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTL 155
T V+ D LD+S+ + ++ G + IQ + P LEGKD++ A+TG+GKTL
Sbjct: 87 TNVTFDSLDLSE-----QTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTL 141
Query: 156 AFGIPIIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVC--VYG 213
AF IP ++ + + SP+ +G +V+ PTRELA Q + +E + S V G
Sbjct: 142 AFLIPAVELLFKERFSPRNGTG----VIVICPTRELAIQTKNVAEELLKHHSQTVSMVIG 197
Query: 214 GVAYATQQNALSRGVDVVVGTPGRIID-LVNGNSLRLTEVQYLVLDEADQMLAVGFEEDV 272
G ++ ++ G ++V+ TPGR++D L N + ++ LV+DEAD++L FEED+
Sbjct: 198 GNNRRSEAQRIASGSNLVIATPGRLLDHLQNTKAFIYKHLKCLVIDEADRILEENFEEDM 257
Query: 273 ETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSAT 332
IL+ +P RQT LFSAT VK L+R L P+ +D V + K+ +
Sbjct: 258 NKILKILPKTRQTALFSATQTSKVKDLARVSLTSPVHVD-VDDGRRKVTNEGLEQGYCVV 316
Query: 333 TNSKRTMLSDLVTVYAKG--GKTIVFTRTKKDAD-EVSLSLTNSIASEALHGDISQHQRE 389
+ +R +L L++ K K +VF T K + + + +HG + Q++R
Sbjct: 317 PSKQRLIL--LISFLKKNLNKKIMVFFSTCKSVQFHTEIMKISDVDVSDIHGGMDQNRRT 374
Query: 390 RTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRA-GKEGT 448
+T F + K +L+ TDVA+RGLDIP+VD +I Y+ P+ P ++HR GRT R G +G
Sbjct: 375 KTFFDFMKAKKGILLCTDVAARGLDIPSVDWIIQYDPPDKPTEYIHRVGRTARGEGAKGK 434
Query: 449 AILMYTSNQRRTVRSLE 465
A+L+ + + +R L+
Sbjct: 435 ALLVLIPEELQFIRYLK 451
>AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:26358328-26361244 FORWARD LENGTH=633
Length = 633
Score = 190 bits (482), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 122/363 (33%), Positives = 193/363 (53%), Gaps = 9/363 (2%)
Query: 108 LGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTD 167
L L +S+ G + IQ + P + G+D++ A+TG+GKTLAF IP ++ +
Sbjct: 159 LSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAVELLYR 218
Query: 168 DSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVC--VYGGVAYATQQNALS 225
+P+ +G LV+ PTRELA Q KE Y S V GG T+ L+
Sbjct: 219 VKFTPRNGTG----VLVICPTRELAIQSYGVAKELLKYHSQTVGKVIGGEKRKTEAEILA 274
Query: 226 RGVDVVVGTPGRIID-LVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQ 284
+GV+++V TPGR++D L N N +++LV+DEAD++L FEED++ IL +P RQ
Sbjct: 275 KGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKILNLLPKTRQ 334
Query: 285 TMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKL-YAVSATTNSKRTMLSDL 343
T LFSAT V+ L+R L P+ ID+ +E G++ Y V + +L+ L
Sbjct: 335 TSLFSATQSAKVEDLARVSLTSPVYIDVDEGRKEVTNEGLEQGYCVVPSAMRLLFLLTFL 394
Query: 344 VTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASEALHGDISQHQRERTLNGFRQGKFTVL 403
K + F+ K L + G I Q++R T F + + +L
Sbjct: 395 KRFQGKKKIMVFFSTCKSTKFHAELFRYIKFDCLEIRGGIDQNKRTPTFLQFIKAETGIL 454
Query: 404 VATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRA-GKEGTAILMYTSNQRRTVR 462
+ T+VA+RGLD P+VD ++ Y+ P++P ++HR GRT R G +G A+L+ T + + ++
Sbjct: 455 LCTNVAARGLDFPHVDWIVQYDPPDNPTDYIHRVGRTARGEGAKGKALLVLTPQELKFIQ 514
Query: 463 SLE 465
L+
Sbjct: 515 YLK 517
>AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:2790341-2794059
FORWARD LENGTH=850
Length = 850
Score = 189 bits (480), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 129/366 (35%), Positives = 197/366 (53%), Gaps = 21/366 (5%)
Query: 101 DELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIP 160
D+ +S L L +++ + G ++ +Q A L L+GKD++A+AKTGTGKT+AF +P
Sbjct: 385 DQFPLSPLSL-----KAIKDAGFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVAFLLP 439
Query: 161 IIKGVTDDSQSPQRRSGRLPK--ALVLAPTRELAKQVEKE---IKESAPYLSTVCVYGGV 215
I+ V P R R P LV+ PTRELA Q E + + P + V GG
Sbjct: 440 AIEAVI--KSPPASRDSRQPPIIVLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGGT 497
Query: 216 AYATQQNAL-SRGVDVVVGTPGRIIDLV---NGNSLRLTEVQYLVLDEADQMLAVGFEED 271
T+Q + + ++V TPGR+ D + +G + RL V+ LVLDEAD +L +GF D
Sbjct: 498 KLPTEQRRMQTNPCQILVATPGRLKDHIENTSGFATRLMGVKVLVLDEADHLLDMGFRRD 557
Query: 272 VETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLT-IDLVGEDEEKLAHGIKLYAVS 330
+E I+ VP RQT LFSAT+P V+++ L + I+ V E + + +
Sbjct: 558 IERIIAAVPKQRQTFLFSATVPEEVRQICHVALKRDHEFINCVQEGSGETHQKVTQMYMI 617
Query: 331 ATTNSKRTMLSDLVTVYAKGG---KTIVFTRTKKDADEVSLSLTN-SIASEALHGDISQH 386
A+ + ++L L+ + K I+F T V+ L+ S+ +H Q
Sbjct: 618 ASLDRHFSLLHVLLKEHIADNVDYKVIIFCTTAMVTRLVADLLSQLSLNVREIHSRKPQS 677
Query: 387 QRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKE 446
R R + FR+ K +LV +DV++RG+D P+V LV+ LP+D E ++HR GRTGR GKE
Sbjct: 678 YRTRVSDEFRKSKAIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKE 737
Query: 447 GTAILM 452
G +L+
Sbjct: 738 GEGVLL 743
>AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3553334-3556646 FORWARD LENGTH=427
Length = 427
Score = 189 bits (479), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 117/353 (33%), Positives = 192/353 (54%), Gaps = 18/353 (5%)
Query: 110 LPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDS 169
L EL+R++V+ G +Q + A+ G D+I +AK+G GKT F + ++ +
Sbjct: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI---E 109
Query: 170 QSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVCV---YGGVAYATQQNALSR 226
SP + S ALVL TRELA Q+ E + YL V YGGV ++ L
Sbjct: 110 PSPGQVS-----ALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKN 164
Query: 227 GV-DVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQML-AVGFEEDVETILQTVPTGRQ 284
+VVGTPGR++ L L L V++ +LDE D+ML ++ DV+ I + P +Q
Sbjct: 165 ECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQ 224
Query: 285 TMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLA-HGIKLYAVSATTNSKRTMLSDL 343
M+FSAT+ ++ + +K++ P+ I + +DE KL HG+ + + + K L+DL
Sbjct: 225 VMMFSATLSKEIRPVCKKFMQDPMEIYV--DDEAKLTLHGLVQHYIKLSEMEKNRKLNDL 282
Query: 344 VTVYAKGGKTIVFTRTKKDADEVS-LSLTNSIASEALHGDISQHQRERTLNGFRQGKFTV 402
+ + ++F ++ A E++ L + + S +H +SQ +R F++G +
Sbjct: 283 LDAL-DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRI 341
Query: 403 LVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTS 455
LVATD+ RG+DI V++VI+Y++P+ +T++HR GR GR G +G AI S
Sbjct: 342 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVAS 394
>AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=427
Length = 427
Score = 189 bits (479), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 117/353 (33%), Positives = 192/353 (54%), Gaps = 18/353 (5%)
Query: 110 LPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDS 169
L EL+R++V+ G +Q + A+ G D+I +AK+G GKT F + ++ +
Sbjct: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI---E 109
Query: 170 QSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVCV---YGGVAYATQQNALSR 226
SP + S ALVL TRELA Q+ E + YL V YGGV ++ L
Sbjct: 110 PSPGQVS-----ALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKN 164
Query: 227 GV-DVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQML-AVGFEEDVETILQTVPTGRQ 284
+VVGTPGR++ L L L V++ +LDE D+ML ++ DV+ I + P +Q
Sbjct: 165 ECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQ 224
Query: 285 TMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLA-HGIKLYAVSATTNSKRTMLSDL 343
M+FSAT+ ++ + +K++ P+ I + +DE KL HG+ + + + K L+DL
Sbjct: 225 VMMFSATLSKEIRPVCKKFMQDPMEIYV--DDEAKLTLHGLVQHYIKLSEMEKNRKLNDL 282
Query: 344 VTVYAKGGKTIVFTRTKKDADEVS-LSLTNSIASEALHGDISQHQRERTLNGFRQGKFTV 402
+ + ++F ++ A E++ L + + S +H +SQ +R F++G +
Sbjct: 283 LDAL-DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRI 341
Query: 403 LVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTS 455
LVATD+ RG+DI V++VI+Y++P+ +T++HR GR GR G +G AI S
Sbjct: 342 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVAS 394
>AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:9843084-9845002
REVERSE LENGTH=614
Length = 614
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/341 (34%), Positives = 179/341 (52%), Gaps = 30/341 (8%)
Query: 137 ALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRL--PKALVLAPTRELAKQ 194
LE +D+I + TG+GKT AF +P++ ++ P R + P ALV+ PTRELA Q
Sbjct: 236 GLEQRDVIGISATGSGKTAAFVLPMLAYIS--RLPPMREENQTEGPYALVMVPTRELAHQ 293
Query: 195 VEKEIKESAPYL--STVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNGNSLRLTEV 252
+E+E + + YL V + G + Q LS+G ++V+ TPGR++D + + L +
Sbjct: 294 IEEETVKFSRYLGFKAVSITGWESIEKQALKLSQGCEIVIATPGRLLDCLERRYVVLNQC 353
Query: 253 QYLVLDEADQMLAVGFEEDVETILQTVPTG-----------------RQTMLFSATMPGW 295
YLVLDEAD+M+ + FE V +L +P R T +FSATM
Sbjct: 354 NYLVLDEADRMIDMDFEPQVSEVLDVMPCSNLKPEKEDEELEEKKIYRTTYMFSATMLLS 413
Query: 296 VKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIV 355
V++L+RK+L P+ + +GE + + + + + K + L L+ IV
Sbjct: 414 VERLARKFLRNPVVV-TIGETTKFITQQV----IMTKESDKFSRLKKLIDDLGDDKTAIV 468
Query: 356 FTRTKKDADEV--SLSLTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGL 413
F T+ D + +L LH SQ QR+ +L F++ +F VLV TDV RGL
Sbjct: 469 FVNTRNKVDYIVKNLEKVGRCRVTTLHAGKSQEQRDYSLEEFKKKRFNVLVTTDVLGRGL 528
Query: 414 DIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYT 454
DI ++ VI+Y++PN + + HR GRTGRAGK G A T
Sbjct: 529 DILDLAQVINYDMPNTMDLYTHRIGRTGRAGKTGVATTFLT 569
>AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase
family protein | chr5:2794540-2797548 FORWARD LENGTH=563
Length = 563
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 132/370 (35%), Positives = 199/370 (53%), Gaps = 29/370 (7%)
Query: 101 DELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIP 160
D+ +S L L + + + G ++ +Q A L L+GKDI+A+AKTGTGKT+AF +P
Sbjct: 83 DQFPLSPLTL-----KGIEDAGFKTMTVVQEATLPLILQGKDILAKAKTGTGKTVAFLLP 137
Query: 161 IIKGVTDDSQSPQRRSGRLPK--ALVLAPTRELAKQVEKE---IKESAPYLSTVCVYGGV 215
I+ V P R R P LV+ PTRELA Q E + + P + V GG
Sbjct: 138 SIEAVI--KAPPASRDNRHPPIIVLVVCPTRELACQAAAEANILLKYHPSIGVQVVIGGT 195
Query: 216 AYATQQNALSRG-VDVVVGTPGRI---IDLVNGNSLRLTEVQYLVLDEADQMLAVGFEED 271
T+Q L + ++V TPGR+ ID +G + RL V+ LVLDEAD +L +GF +
Sbjct: 196 KLPTEQRRLQKSPCQILVATPGRLKDHIDNTSGFATRLMGVKVLVLDEADHLLDMGFRRE 255
Query: 272 VETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTI-----DLVGEDEEKLAHGIKL 326
+E I+ VP RQT LFSAT+ V+++ L + + GE +K++ ++
Sbjct: 256 IERIIAAVPKQRQTFLFSATVSDEVRQICHVALKRDHEFVNCVQEGAGETHQKVS---QM 312
Query: 327 YAVSATTNSKRTMLSDLVTVYAK---GGKTIVFTRTKKDADEVSLSLTN-SIASEALHGD 382
Y + A+ + ++L L+ + G K I+F T V+ L S+ +H
Sbjct: 313 YMI-ASLDRHFSLLYGLLKKHITDNVGYKVIIFCTTAMVTRLVADLLGKLSLNVREIHSR 371
Query: 383 ISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGR 442
Q R R + FR+ K +LV +DV++RG+D P+V LV+ LP+D E ++HR GRTGR
Sbjct: 372 KPQSYRTRVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGR 431
Query: 443 AGKEGTAILM 452
GKEG +L+
Sbjct: 432 KGKEGEGVLL 441
>AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25472598-25476402
REVERSE LENGTH=788
Length = 788
Score = 185 bits (470), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 125/352 (35%), Positives = 191/352 (54%), Gaps = 16/352 (4%)
Query: 115 VRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQR 174
++++ + G ++ +Q A L L+GKD++A+AKTGTGKT+AF +P I+ V P
Sbjct: 332 LKAIKDAGYETMTVVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEVVV--KSPPTS 389
Query: 175 RSGRLPK--ALVLAPTRELAKQVEKE---IKESAPYLSTVCVYGGVAYATQQNAL-SRGV 228
+ P ALV+ PTRELA Q E + + P + V GG +Q + +
Sbjct: 390 PDNKRPPILALVICPTRELANQAATEANTLLKYHPSIGVQVVIGGTRLGLEQKRMQTNPC 449
Query: 229 DVVVGTPGRIIDLVN---GNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQT 285
++V TPGR+ D + G + RL V+ LVLDEAD +L +GF +D+E I+ VP RQT
Sbjct: 450 QILVATPGRLKDHIENTPGFATRLKGVKVLVLDEADHLLDMGFRKDIERIISAVPKERQT 509
Query: 286 MLFSATMPGWVKKLSRKYLNKPLT-IDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLV 344
LFSAT+P V+++ L + ++ V E + ++ + A+ + ++L L+
Sbjct: 510 FLFSATVPEEVRQICLVALRRDHEFVNCVHEGTIETHQQVRQMHMIASLDRHFSLLYTLL 569
Query: 345 TVYAKGG---KTIVFTRTKKDADEVSLSLTN-SIASEALHGDISQHQRERTLNGFRQGKF 400
+ G K IVF T V+ L ++ +H Q R R N FR+ K
Sbjct: 570 REHIMGNVDYKVIVFCTTAMVTKLVADLLGELNLNVREIHSRKPQSYRTRVSNEFRKSKG 629
Query: 401 TVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILM 452
+LV +DV++RG+D P+V LV+ LP D E ++HR GRTGR GKEG IL+
Sbjct: 630 LILVTSDVSARGVDYPDVTLVLQVGLPKDREQYIHRLGRTGRKGKEGEGILL 681
>AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26897235-26899381 REVERSE LENGTH=558
Length = 558
Score = 185 bits (470), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/374 (31%), Positives = 196/374 (52%), Gaps = 15/374 (4%)
Query: 91 DLAPPTTVSNDELDISKLGLP--SELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAK 148
D +PP T++ S+L P +++ +L G P+Q + KD++ A
Sbjct: 2 DSSPPKTITKALPRFSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAA 61
Query: 149 TGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIK---ESAPY 205
TG+GKTLAF +P I+ + + P + + ++++PTREL+ Q+ K + + P
Sbjct: 62 TGSGKTLAFLLPFIEIIRRSNSYPPKPHQVM--GVIISPTRELSAQIHKVAEPFVSTLPN 119
Query: 206 LSTVCVYGGVAYATQQNALSR-GVDVVVGTPGRIIDLVNGNS-LRLTEVQYLVLDEADQM 263
+++V + GG N L G ++++GTPGR+ D++ L ++ L+LDEAD++
Sbjct: 120 VNSVLLVGGREVEADMNTLEEEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRL 179
Query: 264 LAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHG 323
L +GF++ V I+ +P R+T LFSAT V L++ L + + E + K + G
Sbjct: 180 LDMGFQKQVNYIISRLPKQRRTGLFSATQTQAVADLAKAGLRNAMEVISGAESKSKTSSG 239
Query: 324 IKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSLTN-----SIASEA 378
+ + + K + L L+ + K K +VF T D L L+ SI+ +
Sbjct: 240 LYCEYLKCEADQKSSQLVHLL-IENKNKKLVVFFMTCACVDYWGLVLSKIPTLKSISFFS 298
Query: 379 LHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSG 438
HG + Q R+ L F + VL+ TDVA+RGLDIP +D V+ Y+ P DP+ F+HR G
Sbjct: 299 THGKMDQKGRDTALASFTEASSGVLLCTDVAARGLDIPGIDYVVQYDPPQDPDVFIHRVG 358
Query: 439 RTGRAGKEGTAILM 452
RT R ++G AI+
Sbjct: 359 RTARMERQGRAIVF 372
>AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:1612077-1615195
FORWARD LENGTH=593
Length = 593
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/371 (31%), Positives = 190/371 (51%), Gaps = 40/371 (10%)
Query: 110 LPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDS 169
L +++ +L P+Q A + KD+ A TG+GKTLAF +P+++ +
Sbjct: 23 LSGDIIEALNQSDFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEIL---- 78
Query: 170 QSPQRRSGRLP------KALVLAPTRELAKQVEKEIKESAPYLST------VCVYGGVAY 217
RRS P ++++PTREL+ Q+ + P++ST V + GG
Sbjct: 79 ----RRSTSFPPKPHQVMGVIISPTRELSTQI---YNVAQPFVSTLANVNSVLLVGGREV 131
Query: 218 ATQQNALSR-GVDVVVGTPGRIIDLVNGNS-LRLTEVQYLVLDEADQMLAVGFEEDVETI 275
+ G +V++GTPGR+ D++ L ++ L+LDEAD++L +GF+ V I
Sbjct: 132 KADMKIIEEEGCNVLIGTPGRLSDIMERMEILDFRNLEILILDEADRLLEMGFQRQVNYI 191
Query: 276 LQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEE---------KLAHGIKL 326
+ +P R+T LFSAT V++L++ L P+ +++ + + K G+ L
Sbjct: 192 ISRLPKQRRTGLFSATQTEGVEELAKAGLRNPVRVEVRAKSKSESSQQLTNSKTPSGLHL 251
Query: 327 YAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSLTN-----SIASEALHG 381
+ + K + L DL+ + K IVF T D L L+ SI+ +HG
Sbjct: 252 EYMECEADKKSSQLVDLL-IKNSDKKLIVFFMTCASVDYWGLVLSKIPALKSISLIPIHG 310
Query: 382 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG 441
D+ Q+ R++ L F + L+ TDVA+RGLDIP +D V+ Y+ P DP F HR+GRT
Sbjct: 311 DMKQNARDKALASFTKASSGALLCTDVAARGLDIPGIDYVVQYDPPQDPNMFNHRAGRTA 370
Query: 442 RAGKEGTAILM 452
R G++G AI+
Sbjct: 371 RLGRQGRAIVF 381
>AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3554272-3556646 FORWARD LENGTH=344
Length = 344
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 108/321 (33%), Positives = 176/321 (54%), Gaps = 18/321 (5%)
Query: 142 DIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKE 201
D+I +AK+G GKT F + ++ + SP + S ALVL TRELA Q+ E
Sbjct: 2 DVICQAKSGMGKTAVFVLSTLQQI---EPSPGQVS-----ALVLCHTRELAYQICNEFVR 53
Query: 202 SAPYLSTVCV---YGGVAYATQQNALSRGV-DVVVGTPGRIIDLVNGNSLRLTEVQYLVL 257
+ YL V YGGV ++ L +VVGTPGR++ L L L V++ +L
Sbjct: 54 FSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFIL 113
Query: 258 DEADQML-AVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGED 316
DE D+ML ++ DV+ I + P +Q M+FSAT+ ++ + +K++ P+ I + +D
Sbjct: 114 DECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYV--DD 171
Query: 317 EEKLA-HGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTKKDADEVS-LSLTNSI 374
E KL HG+ + + + K L+DL+ + ++F ++ A E++ L + +
Sbjct: 172 EAKLTLHGLVQHYIKLSEMEKNRKLNDLLDAL-DFNQVVIFVKSVSRAAELNKLLVECNF 230
Query: 375 ASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFV 434
S +H +SQ +R F++G +LVATD+ RG+DI V++VI+Y++P+ +T++
Sbjct: 231 PSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL 290
Query: 435 HRSGRTGRAGKEGTAILMYTS 455
HR GR GR G +G AI S
Sbjct: 291 HRVGRAGRFGTKGLAITFVAS 311
>AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:23463284-23466451 REVERSE LENGTH=798
Length = 798
Score = 175 bits (444), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 136/460 (29%), Positives = 228/460 (49%), Gaps = 36/460 (7%)
Query: 101 DELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIP 160
DE IS L L ++L GI + +Q A L L+GKD + +AKTGTGK++AF +P
Sbjct: 331 DESCISPLTL-----KALSASGILKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLP 385
Query: 161 IIKGVTDDSQSPQRRSGRLPK-ALVLAPTRELAKQVEKEIKESAPYLSTVCV---YGGVA 216
I+ V S + + P AL+L PTRELA Q+ E K + + V GG
Sbjct: 386 AIETVLKAMNSGKGVNKVAPIFALILCPTRELASQIAAEGKALLKFHDGIGVQTLIGGTR 445
Query: 217 YATQQNAL-SRGVDVVVGTPGRIIDLV---NGNSLRLTEVQYLVLDEADQMLAVGFEEDV 272
+ Q L S +++ TPGR++D + +G + RL ++ ++DEAD +L +GF DV
Sbjct: 446 FKLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFRRDV 505
Query: 273 ETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLT-IDLVGEDEEKLAHGIKLYAVSA 331
E I+ +P RQ++LFSAT+P V+++S+ L + + ID +G + ++ + A
Sbjct: 506 EKIIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETHDKVRQSCIVA 565
Query: 332 TTNSKRTMLSDLVTVYAKGG---KTIVFTRTKKDADEVSLSLTNSIASEA------LHGD 382
S ++ L+ + K IVF T + SL ++ E +H
Sbjct: 566 PHESHFHLVPHLLKEHINNTPDYKIIVFCSTG-----MVTSLMYTLLREMKLNVREIHAR 620
Query: 383 ISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGR 442
Q R R + F++ +LV +DV++RG++ P+V LVI +P+D E ++HR GRTGR
Sbjct: 621 KPQLHRTRVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGR 680
Query: 443 AGKEGTAILMYTSNQRRTVRSLEHDVGCKFEFVSPPATQEILESSAEQVVAALSRVHPES 502
GK G +L+ +R + L+ E + P I++ +Q +A + E+
Sbjct: 681 EGKGGEGLLLIAPWERYFLDELKD---LPLEPIPAPDLDSIVKHQVDQSMAKIDTSIKEA 737
Query: 503 -----VEFFTATAQKLVEERGTSVLAAALAQLSGFSRPPS 537
+ ++ + + ++ + LA G +PP+
Sbjct: 738 AYHAWLGYYNSVRETGRDKTTLAELANRFCHSIGLEKPPA 777
>AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 174 bits (442), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/384 (32%), Positives = 202/384 (52%), Gaps = 20/384 (5%)
Query: 84 DVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDI 143
D++ G A P V L + GLP +L+ +L G PIQ + AL GK +
Sbjct: 95 DIHVQGQGSAVPPPV----LTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSL 150
Query: 144 IARAKTGTGKTLAFGIPII-KGVTDDSQSP--QRRSGRLPKALVLAPTRELAKQVEKEIK 200
+A A TG+GKT +F +PII + T S+ P QRR+ P A+VLAPTREL QVE + K
Sbjct: 151 LASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRN---PLAMVLAPTRELCVQVEDQAK 207
Query: 201 ---ESAPYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVL 257
+ P+ T V GG + Q + +GV++++GTPGR++DL++ +++ L + VL
Sbjct: 208 MLGKGLPF-KTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVL 266
Query: 258 DEADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDE 317
DE D ML GF + V I Q + + Q +LFSAT+ V+K+ L K + + +G +
Sbjct: 267 DEVDCMLQRGFRDQVMQIFQAL-SQPQVLLFSATISREVEKVGGS-LAKEIILVSIG-NP 323
Query: 318 EKLAHGIKLYAVSATTNSKRTMLSDLV---TVYAKGGKTIVFTRTKKDADEVSLSLTNSI 374
K + A+ K+ L D++ + V +R D ++++ +
Sbjct: 324 NKPNKAVNQLAIWVDAKQKKQKLFDILRSQNHFKPPAVVYVSSRVGADLLANAITVVTGV 383
Query: 375 ASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFV 434
+ ++HG+ +R + F G+ VLV+T V RG+D+ V VI +++P+ + ++
Sbjct: 384 KALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYI 443
Query: 435 HRSGRTGRAGKEGTAILMYTSNQR 458
H GR R G++GTAI+ + R
Sbjct: 444 HVIGRASRMGEKGTAIVFVNEDDR 467
>AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 174 bits (442), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/384 (32%), Positives = 202/384 (52%), Gaps = 20/384 (5%)
Query: 84 DVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDI 143
D++ G A P V L + GLP +L+ +L G PIQ + AL GK +
Sbjct: 95 DIHVQGQGSAVPPPV----LTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSL 150
Query: 144 IARAKTGTGKTLAFGIPII-KGVTDDSQSP--QRRSGRLPKALVLAPTRELAKQVEKEIK 200
+A A TG+GKT +F +PII + T S+ P QRR+ P A+VLAPTREL QVE + K
Sbjct: 151 LASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRN---PLAMVLAPTRELCVQVEDQAK 207
Query: 201 ---ESAPYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVL 257
+ P+ T V GG + Q + +GV++++GTPGR++DL++ +++ L + VL
Sbjct: 208 MLGKGLPF-KTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVL 266
Query: 258 DEADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDE 317
DE D ML GF + V I Q + + Q +LFSAT+ V+K+ L K + + +G +
Sbjct: 267 DEVDCMLQRGFRDQVMQIFQAL-SQPQVLLFSATISREVEKVGGS-LAKEIILVSIG-NP 323
Query: 318 EKLAHGIKLYAVSATTNSKRTMLSDLV---TVYAKGGKTIVFTRTKKDADEVSLSLTNSI 374
K + A+ K+ L D++ + V +R D ++++ +
Sbjct: 324 NKPNKAVNQLAIWVDAKQKKQKLFDILRSQNHFKPPAVVYVSSRVGADLLANAITVVTGV 383
Query: 375 ASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFV 434
+ ++HG+ +R + F G+ VLV+T V RG+D+ V VI +++P+ + ++
Sbjct: 384 KALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYI 443
Query: 435 HRSGRTGRAGKEGTAILMYTSNQR 458
H GR R G++GTAI+ + R
Sbjct: 444 HVIGRASRMGEKGTAIVFVNEDDR 467
>AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=468
Length = 468
Score = 172 bits (437), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 120/392 (30%), Positives = 193/392 (49%), Gaps = 55/392 (14%)
Query: 110 LPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDS 169
L EL+R++V+ G +Q + A+ G D+I +AK+G GKT F + ++ +
Sbjct: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI---E 109
Query: 170 QSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVCV---YGGVAYATQQNALSR 226
SP + S ALVL TRELA Q+ E + YL V YGGV ++ L
Sbjct: 110 PSPGQVS-----ALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKN 164
Query: 227 GV-DVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQML-AVGFEEDVETILQTVPTGRQ 284
+VVGTPGR++ L L L V++ +LDE D+ML ++ DV+ I + P +Q
Sbjct: 165 ECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQ 224
Query: 285 TMLFSATMPGWVKKLSRKY------------------------------------LNKPL 308
M+FSAT+ ++ + +K+ LN P
Sbjct: 225 VMMFSATLSKEIRPVCKKFMQDGLRTLSGDSVALWWVGFGSGYCVFPRFHRARMGLNVPS 284
Query: 309 TID---LVGEDEEKLA-HGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTKKDAD 364
ID + +DE KL HG+ + + + K L+DL+ + ++F ++ A
Sbjct: 285 NIDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDAL-DFNQVVIFVKSVSRAA 343
Query: 365 EVS-LSLTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIH 423
E++ L + + S +H +SQ +R F++G +LVATD+ RG+DI V++VI+
Sbjct: 344 ELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVIN 403
Query: 424 YELPNDPETFVHRSGRTGRAGKEGTAILMYTS 455
Y++P+ +T++HR GR GR G +G AI S
Sbjct: 404 YDMPDSADTYLHRVGRAGRFGTKGLAITFVAS 435
>AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:3576483-3580396 FORWARD LENGTH=845
Length = 845
Score = 169 bits (427), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 122/376 (32%), Positives = 196/376 (52%), Gaps = 28/376 (7%)
Query: 101 DELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIP 160
DE IS L L ++L GI + +Q A L L+GKD + +AKTGTGK++AF +P
Sbjct: 378 DESCISPLTL-----KALSASGIVKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLP 432
Query: 161 IIKGVTDDSQSPQRRSGRLPK-ALVLAPTRELAKQVEKEIK---ESAPYLSTVCVYGGVA 216
I+ V S + P L+L PTRELA Q+ E K ++ + + GG
Sbjct: 433 AIETVLKAMNSGKGVHKVAPIFVLILCPTRELASQIAAEGKALLKNHDGIGVQTLIGGTR 492
Query: 217 YATQQNAL-SRGVDVVVGTPGRIIDLV---NGNSLRLTEVQYLVLDEADQMLAVGFEEDV 272
+ Q L S +++ TPGR++D + +G + RL ++ ++DEAD +L +GF+ DV
Sbjct: 493 FRLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFKRDV 552
Query: 273 ETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLT-IDLVGEDEEKLAHGIKLYAVSA 331
E I+ +P RQ++LFSAT+P V+++S+ L + + ID +G + +K + A
Sbjct: 553 EKIIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETHDKVKQSCIVA 612
Query: 332 TTNSKRTMLSDLVTVYAKGG---KTIVFTRTKKDADEVSLSLTNSIASEA------LHGD 382
S ++ L+ + K IVF T + SL ++ E +H
Sbjct: 613 PHESHFHLVPHLLKEHINNMPDYKIIVFCSTG-----MVTSLMYTLLREMKLNVREIHAR 667
Query: 383 ISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGR 442
Q R + F++ +LV +DV++RG++ P+V LVI +P+D E ++HR GRTGR
Sbjct: 668 KPQLHRTCVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGR 727
Query: 443 AGKEGTAILMYTSNQR 458
GK G +L+ +R
Sbjct: 728 EGKGGKGLLLIAPWER 743
>AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:4351888-4353543 FORWARD LENGTH=551
Length = 551
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/425 (29%), Positives = 212/425 (49%), Gaps = 58/425 (13%)
Query: 107 KLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGV- 165
+LGLP L+ SL G + +Q A + ++G D + ++ TG+GKTLA+ +PI+ +
Sbjct: 114 ELGLPDSLLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTLAYLLPILSEIG 173
Query: 166 --TDDSQSPQRRSGRLP--KALVLAPTRELAKQVEKEI-KESAPYLSTVC--VYGGVAYA 218
+ S+S + + +A+++AP+REL Q+ +E+ K P + + GG
Sbjct: 174 PLAEKSRSSHSENDKRTEIQAMIVAPSRELGMQIVREVEKLLGPVHRRMVQQLVGGANRM 233
Query: 219 TQQNALSRGVD-VVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQ 277
Q+ AL + +VVGTPGRI ++ G L ++LVLDE D++L+ F ED+ IL+
Sbjct: 234 RQEEALKKNKPAIVVGTPGRIAEISKGGKLHTHGCRFLVLDEVDELLSFNFREDIHRILE 293
Query: 278 TV-------PTG-------RQTMLFSATMPGWVKKLSRKYLNKPLTI--------DLV-- 313
V P G RQT+L SAT+P V + ++ + ++P+ + D V
Sbjct: 294 HVGKRSGAGPKGEVDERANRQTILVSATVPFSVIRAAKSWSHEPVLVQANKVTPLDTVQP 353
Query: 314 ---------------GEDE---EKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIV 355
G+ + + L +K Y + K L V+A ++++
Sbjct: 354 SAPVMSLTPTTSEADGQIQTTIQSLPPALKHYYCISKHQHKVDTLRR--CVHALDAQSVI 411
Query: 356 -FTRTKKDADEVSLSL-TNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGL 413
F + +V L + S +HGD+ + R L F+ G+ VLV ++++RGL
Sbjct: 412 AFMNHSRQLKDVVYKLEARGMNSAEMHGDLGKLGRSTVLKKFKNGEIKVLVTNELSARGL 471
Query: 414 DIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSLEHDVGCKF- 472
D+ DLV++ ELP D + HR+GRTGR G++GT + + +Q V+ +E +G F
Sbjct: 472 DVAECDLVVNLELPTDAVHYAHRAGRTGRLGRKGTVVTVCEESQVFIVKKMEKQLGLPFL 531
Query: 473 --EFV 475
EFV
Sbjct: 532 YCEFV 536
>AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWARD
LENGTH=621
Length = 621
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/363 (33%), Positives = 195/363 (53%), Gaps = 25/363 (6%)
Query: 104 DISKLGLPSELVRSLVNRGITSLFPIQRAVLVPA-LEGKDIIARAKTGTGKTLAFGIPII 162
+ +LGL E++ +L I IQ + +PA +E K ++ + TG+GKTLA+ +PI+
Sbjct: 113 NFQELGLSEEVMGALQELNIEVPTEIQ-CIGIPAVMERKSVVLGSHTGSGKTLAYLLPIV 171
Query: 163 KGVTDDSQSPQRRSG-RLPKALVLAPTRELAKQV---EKEIKESAPYLSTVCVYGGVAYA 218
+ + +D + +++ R P+ +VL PTREL++QV K I A + S + V GG
Sbjct: 172 QLMREDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKSISHHARFRS-ILVSGGSRIR 230
Query: 219 TQQNALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDV------ 272
Q+++L+ +D+VVGTPGRI+ + ++ ++ YLVLDEAD M GF ++
Sbjct: 231 PQEDSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPEIRKFLAP 290
Query: 273 --ETILQTVPTGRQTMLFSATMPGWVKKLSRKYLN--KPLTIDLVGEDEEKLAHG-IKLY 327
+ L+T G QT+L +ATM V+KL + + L + + H IKL
Sbjct: 291 LNQRALKTNDQGFQTVLVTATMTMAVQKLVDEEFQGIEHLRTSTLHKKIANARHDFIKL- 349
Query: 328 AVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSLT-NSIASEALHGDISQH 386
S + +L L AKG K +VF T + V L+ N I++ HG++
Sbjct: 350 --SGGEDKLEALLQVLEPSLAKGSKVMVFCNTLNSSRAVDHYLSENQISTVNYHGEVPAE 407
Query: 387 QRERTLNGFR--QGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAG 444
QR L F+ +G LV TD+A+RGLD+ +VD V+ ++ P + ++HR+GRT R G
Sbjct: 408 QRVENLKKFKDEEGDCPTLVCTDLAARGLDL-DVDHVVMFDFPKNSIDYLHRTGRTARMG 466
Query: 445 KEG 447
+G
Sbjct: 467 AKG 469
>AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359628-360734
FORWARD LENGTH=368
Length = 368
Score = 160 bits (404), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 180/331 (54%), Gaps = 16/331 (4%)
Query: 137 ALEGKDIIARAKTGTGKTLAFGIPII-KGVTDDSQSP--QRRSGRLPKALVLAPTRELAK 193
AL GK ++A A TG+GKT +F +PII + T S+ P QRR+ P A+VLAPTREL
Sbjct: 7 ALTGKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRN---PLAMVLAPTRELCV 63
Query: 194 QVEKEIK---ESAPYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNGNSLRLT 250
QVE + K + P+ T V GG + Q + +GV++++GTPGR++DL++ +++ L
Sbjct: 64 QVEDQAKMLGKGLPF-KTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIELD 122
Query: 251 EVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTI 310
+ VLDE D ML GF + V I Q + + Q +LFSAT+ V+K+ L K + +
Sbjct: 123 NIMTFVLDEVDCMLQRGFRDQVMQIFQAL-SQPQVLLFSATISREVEKVGGS-LAKEIIL 180
Query: 311 DLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLV---TVYAKGGKTIVFTRTKKDADEVS 367
+G + K + A+ K+ L D++ + V +R D +
Sbjct: 181 VSIG-NPNKPNKAVNQLAIWVDAKQKKQKLFDILRSQNHFKPPAVVYVSSRVGADLLANA 239
Query: 368 LSLTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELP 427
+++ + + ++HG+ +R + F G+ VLV+T V RG+D+ V VI +++P
Sbjct: 240 ITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMP 299
Query: 428 NDPETFVHRSGRTGRAGKEGTAILMYTSNQR 458
+ + ++H GR R G++GTAI+ + R
Sbjct: 300 STIKEYIHVIGRASRMGEKGTAIVFVNEDDR 330
>AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5738020-5743042
REVERSE LENGTH=826
Length = 826
Score = 159 bits (403), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 125/423 (29%), Positives = 205/423 (48%), Gaps = 76/423 (17%)
Query: 106 SKLGLPSELVRSLVNRGITSLFPIQRAVL-VPALEGKDIIARAKTGTGKTLAFGIPIIKG 164
S + L L++S+ IQ+A V A +GKD+I A+TG+GKTLAFG+PI++
Sbjct: 193 SSMRLHPLLMKSIYRLDFKEPTKIQKACFNVAAYQGKDVIGAAETGSGKTLAFGLPILQR 252
Query: 165 VTDDSQSPQRRSGRLP----------------KALVLAPTRELAKQVEKEIKESAPYLS- 207
+ D+ + + G+L +AL++ PTRELA QV + ++ +A LS
Sbjct: 253 LLDERE----KVGKLYALKGEEAQKYAADGYLRALIITPTRELALQVTEHLENAAKNLSV 308
Query: 208 -TVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQ---YLVLDEADQM 263
V + GG+ Q+ L ++VV TPGR+ +L++ L E+ + VLDEAD+M
Sbjct: 309 KVVPIVGGMFSEKQERRLKEKPEIVVATPGRLWELMSAGEKHLVELHSLSFFVLDEADRM 368
Query: 264 LAVGFEEDVETILQTVPT------------------------GRQTMLFSATMP---GWV 296
+ G ++++IL +P RQT +FSAT+ +
Sbjct: 369 VERGHFRELQSILDLLPVTDKPNEGKTQTVKSNDTVLNVPKKKRQTFVFSATIALSSDFR 428
Query: 297 KKLSRKYLNKPL-------TIDLVGEDE--------------EKLAHGIKLYAVSATTNS 335
KKL R +I+++ E LA I+ +
Sbjct: 429 KKLKRGSSKSKQSSSGEVNSIEVLSERAGMRDNVAIIDLTTTSILAPKIEESFIKCEEKE 488
Query: 336 KRTMLSDLVTVYAKGGKTIVFTRTKKDADEVS-LSLTNSIASEALHGDISQHQRERTLNG 394
K L +++V+ + G+TIVF + D +S L + L ++ Q R ++++
Sbjct: 489 KDAYLYYILSVHGQ-GRTIVFCTSVTDLRHISGLLKILGLDVCTLFSEMKQRARLKSIDR 547
Query: 395 FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYT 454
FR + +L+ATD+ +RG+DI NV +IHY+LP+ E +VHR GRT RA +G +I +
Sbjct: 548 FRASENGILIATDLVARGIDIKNVRTIIHYKLPHSAEVYVHRCGRTARAFADGCSIALIE 607
Query: 455 SNQ 457
N+
Sbjct: 608 PNE 610
>AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=486
Length = 486
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 193/409 (47%), Gaps = 71/409 (17%)
Query: 110 LPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDS 169
L EL+R++V+ G +Q + A+ G D+I +AK+G GKT F + ++ +
Sbjct: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI---E 109
Query: 170 QSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVCV---YGGVAYATQQNALSR 226
SP + S ALVL TRELA Q+ E + YL V YGGV ++ L
Sbjct: 110 PSPGQVS-----ALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKN 164
Query: 227 GV-DVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQML-AVGFEEDVETILQTVPTGRQ 284
+VVGTPGR++ L L L V++ +LDE D+ML ++ DV+ I + P +Q
Sbjct: 165 ECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQ 224
Query: 285 TMLFSATMPGWVKKLSRKYL-----NKPLTIDL----VGEDEEKLAH-------GIKLYA 328
M+FSAT+ ++ + +K++ N+ +++ L V E +L + ++
Sbjct: 225 VMMFSATLSKEIRPVCKKFMQDFLENETVSVRLFSFGVENSEWRLCSFGFIVLVWVSMFR 284
Query: 329 VSATTNSK-----------------------RTMLSDLVTVYAK---------------- 349
+SK + L LV Y K
Sbjct: 285 AILMFHSKTHIFEEKRWTRISPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDA 344
Query: 350 --GGKTIVFTRTKKDADEVS-LSLTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVAT 406
+ ++F ++ A E++ L + + S +H +SQ +R F++G +LVAT
Sbjct: 345 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVAT 404
Query: 407 DVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTS 455
D+ RG+DI V++VI+Y++P+ +T++HR GR GR G +G AI S
Sbjct: 405 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVAS 453
>AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:16631661-16634834
FORWARD LENGTH=626
Length = 626
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 116/384 (30%), Positives = 190/384 (49%), Gaps = 50/384 (13%)
Query: 107 KLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGV- 165
+LGL S L+R+L +GI IQ++ + LEGKD++ARAKTG+GKTLA+ +P+++ +
Sbjct: 50 ELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLLPLLQKLF 109
Query: 166 TDDSQSPQRRSGRLPKALVLAPTRELAKQVEKE----IKESAPYLSTVCVYGGVAYATQQ 221
+ DS S ++ + P A +L P+REL +QV E I+ L V + ++ + +
Sbjct: 110 SADSVSKKKLA---PSAFILVPSRELCQQVYTEVSSLIELCRVQLKAVQLTSSMSASDMR 166
Query: 222 NALSRGVDVVVGTPGRIIDLVNGNSLRLTEV----QYLVLDEADQMLAVGFEEDVETILQ 277
NAL+ +++V TP I L T V LVLDEAD +L+ G+E+++ ++
Sbjct: 167 NALAGLPEILVSTPACIPKCFAAGVLEPTAVSESLSILVLDEADLLLSYGYEDNLRSVTS 226
Query: 278 TVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGED--EEKLAHGIKLYAVSATTNS 335
+P Q +L SAT V+KL + L+ P+ + L ++ EE + ++ + +S +
Sbjct: 227 IIPRRCQCLLMSATTSSDVEKLKKLILHNPIVLTLTEDNDKEEAVPSNVQQFWISCSAQD 286
Query: 336 KRTMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSLTN-SIASEALHGDISQHQRERTLNG 394
K + L+ + K ++F T + L L I S L+G++ Q+ R L
Sbjct: 287 KLLHILALLKLEVVQKKILIFINTIDMGFRLKLFLEKFGIKSAILNGELPQNSRLHILEQ 346
Query: 395 FRQGKFTVLVATDVAS-----------------------------------RGLDIPNVD 419
F G F L+ATD S RG+D V
Sbjct: 347 FNAGLFDYLIATDDNSQTKKQKEEAKGEANKENKKNNKRSKPKLDAEFGVVRGIDFKKVH 406
Query: 420 LVIHYELPNDPETFVHRSGRTGRA 443
VI++++P ++HR GRTGRA
Sbjct: 407 TVINFDMPQSVTGYIHRIGRTGRA 430
>AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2980483-2983268
REVERSE LENGTH=541
Length = 541
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 202/393 (51%), Gaps = 18/393 (4%)
Query: 85 VNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDII 144
++ G ++ PP S EL S+ G ++R+L G PIQR + L G++
Sbjct: 125 IHVSGNNIPPPLK-SFAELS-SRYGCEGYILRNLAELGFKEPTPIQRQAIPILLSGRECF 182
Query: 145 ARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAP 204
A A TG+GKT AF P++ + +R S +A++L+P RELA Q +E K+
Sbjct: 183 ACAPTGSGKTFAFICPMLIKL-------KRPSTDGIRAVILSPARELAAQTAREGKKLIK 235
Query: 205 YLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQML 264
+ + DV++ TP R+ + + L++V+YLVLDE+D++
Sbjct: 236 GSNFHIRLMTKPLVKTADFSKLWCDVLISTPMRLKRAIKAKKIDLSKVEYLVLDESDKLF 295
Query: 265 AVGFEEDVETILQTV--PTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAH 322
+ ++ +++ P+ ++ LFSAT+P V++L+R ++ + + ++G + +
Sbjct: 296 EQSLLKQIDCVVKACSNPSIIRS-LFSATLPDSVEELARSIMHDAVRV-IIGR-KNTASE 352
Query: 323 GIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSL-TNSIASEALHG 381
+K V A + + + + ++F ++K+ A E+ L +I + +H
Sbjct: 353 TVKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYDELKCENIRAGVIHS 412
Query: 382 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG 441
D+ +RE ++ FR G+ VL+ATDV +RG+D ++ VI+Y+ P+ ++HR GR+G
Sbjct: 413 DLPPGERENAVDQFRAGEKWVLIATDVIARGMDFKGINCVINYDFPDSASAYIHRIGRSG 472
Query: 442 RAGKEGTAILMYTSNQRRTVRSLEHDV---GCK 471
RAG+ G AI YT +R++ + + GC+
Sbjct: 473 RAGRSGEAITFYTEQDVPFLRNIANTMMSSGCE 505
>AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 |
chr4:9001426-9004534 FORWARD LENGTH=522
Length = 522
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 132/449 (29%), Positives = 209/449 (46%), Gaps = 85/449 (18%)
Query: 95 PTTVSNDE---LDISKLGLPSELVRSLVNRGITSLFPIQRAV----LVPALEGKDIIARA 147
P VSN E LD L +L ++L N GI+SLFP+Q AV + P +DI +
Sbjct: 21 PVDVSNVENCALDTLPC-LNPKLKKALENMGISSLFPVQVAVWHETIGPGGFERDICVNS 79
Query: 148 KTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAP--- 204
TG+GKTL++ +PI++ + R R +ALV+ PTR+LA QV+ AP
Sbjct: 80 PTGSGKTLSYALPIVQLLAS-------RPVRCLRALVVLPTRDLALQVKDVFDAIAPAVG 132
Query: 205 ------------------YLSTVCVYGGVAYAT---QQNALSRGVDVVVGTPGRIIDLVN 243
+ T + G+ Y QN L VD++V TPGR++D +N
Sbjct: 133 LSVGSAVGQSSIAGEISQLIKTPKLDAGICYDPDDLSQN-LESAVDILVATPGRLMDHIN 191
Query: 244 G-NSLRLTEVQYLVLDEADQMLAVGFEEDVETILQT---------------VPTG----- 282
L ++YLV+DE D++L ++ + T+LQ VP+
Sbjct: 192 NTKGFTLEHLRYLVVDETDRLLREAYQSWLPTVLQLTQTSDDSLFPSFTPFVPSAFGSLQ 251
Query: 283 ---RQT---------------MLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGI 324
RQ+ M+ SAT+ KL + L+ PL + G +L +
Sbjct: 252 TVRRQSVERGFKGKPYPRLVKMVLSATLTQDPSKLIQLDLHHPLFMT-TGGSRYRLPEKL 310
Query: 325 KLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTR----TKKDADEVSLSLTNSIASEALH 380
+ + T K L L+ + +G K I+FT T++ ++ I ++
Sbjct: 311 ECLRLICETGMKPVYLVALLKSW-EGEKCIIFTSSVETTRRLCKLLNFFGDPKIKAKEYS 369
Query: 381 GDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRT 440
G ++Q R + L FR+G VLVA+D +RG+D+ V VI+Y++P +TF+HR+GRT
Sbjct: 370 GGLNQSLRSKELKAFRKGDIQVLVASDALTRGMDVKGVTNVINYDMPPFAKTFIHRAGRT 429
Query: 441 GRAGKEGTAILMYTSNQRRTVRSLEHDVG 469
RAG+ G + ++++ R L VG
Sbjct: 430 ARAGQAGRCFTLLSNHEVRRFSKLLEKVG 458
>AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:16976783-16979392
FORWARD LENGTH=609
Length = 609
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 194/428 (45%), Gaps = 86/428 (20%)
Query: 105 ISKLGLPSELVRSLVNR-GITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIK 163
S LGL ++L L R G + +Q + L G+D++ A TGTGKT+A+ P+I
Sbjct: 31 FSSLGLDTKLSDQLKERMGFEAPTLVQAQAIPVILSGRDVLVNAPTGTGKTIAYLAPLIH 90
Query: 164 GVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVC---VYGGVAYATQ 220
+ S R G ALV+ PTREL QV + +++ + V GG A +
Sbjct: 91 HLQGHSPKVDRSHGTF--ALVIVPTRELCLQVYETLEKLLHRFHWIVPGYVMGGEKKAKE 148
Query: 221 QNALSRGVDVVVGTPGRIID-LVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQ-- 277
+ L +G+ +++ TPGR++D L N S +++++ DEAD +L +G+ +++E I++
Sbjct: 149 KARLRKGISILIATPGRLLDHLKNTASFVHKNLRWVIFDEADSILELGYGKEIEQIIKLL 208
Query: 278 ------------TVPTG--RQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHG 323
VP G +Q +L SAT+ V L++ L+ P+ ++G D KL
Sbjct: 209 GSGQNEQGEEDDIVPKGIQKQNLLLSATLNDKVNDLAKLSLDDPV---MIGLDNTKLQQN 265
Query: 324 IKLYAVSATTNSKRTML-----------------SDLVTVYAK----------------- 349
+ + + +A + M+ S LV Y +
Sbjct: 266 LSIESPAAPDSDAEDMVIHVNKSANPLSEDYGIPSQLVQRYLRVPCGARLVALLSVLKNL 325
Query: 350 -----GGKTIVFTRTKKDADEVSLSLT-------NSIASEA-------------LHGDIS 384
K +VF T +DA + SL NS E LHG +
Sbjct: 326 FEREASQKVVVFFST-RDAVDFHYSLLSEFQWPPNSETEEEGTKELFLKCKTFRLHGSME 384
Query: 385 QHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAG 444
Q R F+ K VL++TDVA+RGLD P V +I Y+ P + +VHR GRT R G
Sbjct: 385 QEDRRSAFGTFKTEKQAVLLSTDVAARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARIG 444
Query: 445 KEGTAILM 452
++G A+L
Sbjct: 445 EKGEALLF 452
>AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:22298668-22301719 REVERSE LENGTH=739
Length = 739
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 184/368 (50%), Gaps = 13/368 (3%)
Query: 105 ISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKG 164
++L + + R L + + +Q A + AL G+DI+ A+TG+GKTLAF IPI++
Sbjct: 73 FAQLPISDKTKRGLKDAKYVDMTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPILEK 132
Query: 165 VTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPY--LSTVCVYGGVAYATQQN 222
+ + SP+ G ++++PTRELA Q + + + S + GG +
Sbjct: 133 LHRERWSPEDGVG----CIIISPTRELAAQTFGVLNKVGKFHKFSAGLLIGGREGVDVEK 188
Query: 223 ALSRGVDVVVGTPGRIIDLVNGN-SLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPT 281
++++V PGR++ ++ + ++Q L+LDEAD++L F+ ++ I+ +P
Sbjct: 189 ERVHEMNILVCAPGRLLQHMDETPNFECPQLQILILDEADRVLDSAFKGQLDPIISQLPK 248
Query: 282 GRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLS 341
RQT+LFSAT VK L+R L P I + E + + K ML
Sbjct: 249 HRQTLLFSATQTKKVKDLARLSLRDPEYISVHAEAVTATPTSLMQTVMIVPVEKKLDMLW 308
Query: 342 DLVTVYAKGGKTIVFTRTKKDAD---EVSLSLTNSIASEALHGDISQHQRERTLNGFRQG 398
+ + + +VF TKK E L I ++LHG +SQ +R + F +
Sbjct: 309 SFIKTHL-NSRILVFLSTKKQVKFVHEAFNKLRPGIPLKSLHGKMSQEKRMGVYSQFIER 367
Query: 399 KFTVLVATDVASRGLDIPN-VDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQ 457
+ +VL TDV +RGLD VD V+ + P D +++HR GRT R +G ++L T ++
Sbjct: 368 Q-SVLFCTDVLARGLDFDKAVDWVVQVDCPEDVASYIHRVGRTARFYTQGKSLLFLTPSE 426
Query: 458 RRTVRSLE 465
+ + L+
Sbjct: 427 EKMIEKLQ 434
>AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr3:19687968-19690423 FORWARD LENGTH=496
Length = 496
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 166/328 (50%), Gaps = 35/328 (10%)
Query: 141 KDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIK 200
K +IA+A G+GKT F + ++ V P R P+AL + PTRELA Q E+
Sbjct: 132 KHLIAQAHNGSGKTTCFVLGMLSRV-----DPTLRE---PQALCICPTRELANQ-NMEVL 182
Query: 201 ESAPYLSTVCVYGGVAYATQ-QNALSRGV----DVVVGTPGRIIDLVNGNSLRLTEVQYL 255
+ + + V +T+ A +RG VV+GTPG + + L L ++ L
Sbjct: 183 QKMGKFTGITAELAVPDSTRGAPAATRGAPVSAHVVIGTPGTLKKWMAFKRLGLNHLKIL 242
Query: 256 VLDEADQMLAV-GFEEDVETILQTVPTGR-----QTMLFSATMPGWVKKLSRKYLNKPLT 309
V DEAD MLA GF +D I++ + GR Q +LFSAT VK + + P
Sbjct: 243 VFDEADHMLATDGFRDDSLKIMKDI--GRVNPNFQVLLFSATFNETVKDFVARTVKDPNQ 300
Query: 310 IDLVGEDEEKLA-HGIKLY-AVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTKKDADEVS 367
+ + ED LA +K Y V +K ++ D + G+TI+F +TK A +V
Sbjct: 301 LFVKRED---LALDSVKQYKVVCPKEQNKIEVIKDQIMELGDIGQTIIFVKTKASAQKVH 357
Query: 368 LSLTN-SIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYEL 426
+L ++HG++++ R++ + F++ VL+ATDV +RG D V+LV++Y L
Sbjct: 358 KALAEMGYDVTSVHGNLTESDRDKIVKEFKECLTQVLIATDVIARGFDQQRVNLVVNYNL 417
Query: 427 PN-------DPETFVHRSGRTGRAGKEG 447
P D E ++HR GR GR G++G
Sbjct: 418 PTKYETGEPDYEVYLHRVGRAGRFGRKG 445
>AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:2201531-2204662 FORWARD LENGTH=781
Length = 781
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 191/409 (46%), Gaps = 40/409 (9%)
Query: 105 ISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKG 164
+++G +++++L + IQ P ++GK I ++G+GKTLA+ +P+I+
Sbjct: 376 FAEIGCSEDMMKALKEQNFDRPAHIQAMAFSPVIDGKSCIIADQSGSGKTLAYLVPVIQR 435
Query: 165 VTDDS-QSPQRRSGRLPKALVLAPTRELAKQV---EKEIKESAPYLSTVCVYGGVAYATQ 220
+ ++ Q + S P+ +VL PT ELA QV + I +S ++ V GG TQ
Sbjct: 436 LREEELQGHSKSSPGCPRVIVLVPTAELASQVLANCRSISKSGVPFRSMVVTGGFRQRTQ 495
Query: 221 QNALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVG-FEEDVETILQTV 279
L +GVDV++ TPGR L+N L L+ ++ +LDE D + FE ++ ++ +
Sbjct: 496 LENLEQGVDVLIATPGRFTYLMNEGILGLSNLRCAILDEVDILFGDDEFEAALQNLINSS 555
Query: 280 PTGRQTMLFSATMPGWV-KKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAV--SATTNSK 336
P Q + +AT+P + KL + P ++G ++++ ++ + V S N++
Sbjct: 556 PVTAQYLFVTATLPLEIYNKLVEVF---PDCEVVMGPRVHRVSNALEEFLVDCSGDDNAE 612
Query: 337 RT-------MLSDLVTVYAKG--GKTIVFTRTKKDADEVSLSLTNSIASE------ALHG 381
+T + L+ + + KTI+F + +V E H
Sbjct: 613 KTPETAFQNKKTALLQIMEENPVSKTIIFCNKIETCRKVENIFKRVDRKERQLHVLPFHA 672
Query: 382 DISQHQRERTLNGFRQGK----FTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRS 437
+SQ R + F + LV TD ASRG+D VD V+ ++ P DP +V R
Sbjct: 673 ALSQESRLTNMQEFTSSQPEENSLFLVCTDRASRGIDFSGVDHVVLFDFPRDPSEYVRRV 732
Query: 438 GRTGRAGK-EGTAILMYTSNQ----RRTVRSLE-----HDVGCKFEFVS 476
GRT R + +G A + Q RR + E HDV +EF +
Sbjct: 733 GRTARGARGKGKAFIFVVGKQVGLARRIIERNEKGHPVHDVPNAYEFTT 781
>AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26870262-26872152 REVERSE LENGTH=465
Length = 465
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 153/337 (45%), Gaps = 36/337 (10%)
Query: 91 DLAPPTTVSND---ELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARA 147
D +PP T+ + K L +++ +L G P+Q + KD++ A
Sbjct: 2 DSSPPNTIIEEAPPRFSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDA 61
Query: 148 KTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLS 207
TG+GKTLAF +P I+ + + P + + ++++PTREL+ Q+ K + +
Sbjct: 62 ATGSGKTLAFLLPFIEIIRRSNSYPPKPHQVM--GVIISPTRELSAQIHK-VARAVRLDF 118
Query: 208 TVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNGNS-LRLTEVQYLVLDEADQMLAV 266
C A G ++++GTPGR+ D++ L ++ L+LDEAD++L +
Sbjct: 119 AKCRE---VEADMNTLEEEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDM 175
Query: 267 GFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKL 326
GF++ V I+ +P R+T LFSAT V L++ L P + +L H
Sbjct: 176 GFQKQVNYIISRLPKQRRTGLFSATQTQAVADLAKAGLRNPYLKCEADQKSSQLVH---- 231
Query: 327 YAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSLT-----NSIASEALHG 381
+ + K K +VF T D L ++ SI+ HG
Sbjct: 232 -----------------LLIENKNKKLVVFFMTCACVDYWGLVISKIPSLKSISFFPTHG 274
Query: 382 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNV 418
+ Q R+ L F + VL+ TDVA+RGLDIP +
Sbjct: 275 KMDQKGRDTALASFTEASSGVLLCTDVAARGLDIPGI 311
>AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6461444-6463687
FORWARD LENGTH=472
Length = 472
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 178/390 (45%), Gaps = 70/390 (17%)
Query: 126 LFP--IQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKAL 183
+FP IQR L G+D I A+TG+GKTL + + I + +PQR S +A+
Sbjct: 97 VFPTDIQREALPTLFTGRDCILHAQTGSGKTLTYLLLIFSLI-----NPQRSS---VQAV 148
Query: 184 VLAPTRELAKQVEKEIKESAPYLSTVCVYGGVAYATQQNALSRGVD---------VVVGT 234
++ PTREL QV K + A S + V G A R ++V T
Sbjct: 149 IVVPTRELGMQVTKVARMLAAK-SEIDVKGCTVMALLDGGTLRRHKSWLKAEPPAILVAT 207
Query: 235 PGRIIDLVNGNSLRLTEVQYLVLDEADQML----AVGFEEDVETILQTVPTG--RQTMLF 288
+ ++ + R+ V+ LV+DE D + VG V +L + + RQT+
Sbjct: 208 VASLCHMLEKHIFRIDSVRVLVVDEVDFLFYSSKQVG---SVRKLLTSFSSCDKRQTVFA 264
Query: 289 SATMP------------GWVKK-LSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNS 335
SA++P W K+ + +++ + + L L H + + TN
Sbjct: 265 SASIPQHKHFVHDCIQQKWTKRDVVHVHVSAIMPMPLC------LLHR---FVMCEKTNK 315
Query: 336 KRTMLSDLVTVYAKGGKTIVFT-----RTKKDADEVSLSL---------TNSIASEALHG 381
+ +L+ L + + I+F ++KK ++ S +L S+ L G
Sbjct: 316 HQVLLALLESDAPESA--IIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLEG 373
Query: 382 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG 441
D++ + R +L RQG +LV+TD+A+RG+D+P + +++LP ++HR+GR G
Sbjct: 374 DMNFNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRAGRAG 433
Query: 442 R---AGKEGTAILMYTSNQRRTVRSLEHDV 468
R + ++ + TS +R ++ E+++
Sbjct: 434 RKPFSDRKCIVANLITSEERFVLQRYENEL 463
>AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:22090369-22092885 REVERSE LENGTH=581
Length = 581
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 12/223 (5%)
Query: 257 LDEADQMLAVGFEEDVET------ILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPL-- 308
LD+ QM +V E +T + + +Q + +AT+P KK + L
Sbjct: 321 LDDIAQMPSVEAEAGSDTKKGWRRVRKIYTRSKQYIFIAATLPVNGKKTAGGILKHMFQD 380
Query: 309 TIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGG--KTIVFTRTKKDADEV 366
+ + G + + +K V T +S+ L + V +T+VF T + + V
Sbjct: 381 AVWVSGNFLHRNSPRLKQKWVEVTVDSQVDALIEAVKNNNNTNTERTMVFANTVEAVEAV 440
Query: 367 SLSLTN-SIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYE 425
+ L SI H + +R L FR+ V V TD A+RG+D+PNV VI +
Sbjct: 441 ADILEKASIQCYRYHKNHKLDERANILADFRETG-GVFVCTDAAARGVDVPNVSHVIQAD 499
Query: 426 LPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSLEHDV 468
+ F+HR GRT RAG+ GT +YT R V ++ V
Sbjct: 500 FASSAVDFLHRIGRTARAGQYGTVTSLYTEANRDLVEAIREAV 542
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 39/218 (17%)
Query: 129 IQRAVLVPA-LEGKDIIARAKTGTGKTLAFGIPIIKGVTD---DSQSPQRRSGRLPK--- 181
+ +AV +P+ L GKD+I A+TG+GKT + PII +T+ DS+ R P
Sbjct: 105 LTQAVCIPSILSGKDVIVAAETGSGKTHGYLAPIIDQLTNTALDSEVTNREERPFPLKNI 164
Query: 182 ALVLAPTRELAKQVEKEI-----KESAPYLSTVCVYGGVAYATQQNALSRGVDVVVGTPG 236
+L+L P L +QV + + ++ P L V G Q R D++V TP
Sbjct: 165 SLILCPNVMLCEQVVRMVNGLVDEDGNPLLRVEAVCGS------QGWPDRLPDIIVSTPA 218
Query: 237 RIIDLVNGNSLRLTE----VQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTMLFSATM 292
+++ + R E V+Y+V DEAD +L F+ + ++ + +
Sbjct: 219 ALLNNIEPKRNRRLEFLRCVKYVVFDEADMLLCGSFQNQIIRLINMLRFDEKQ------- 271
Query: 293 PGWVKKLSRKYLNKPL-------TIDLVGEDEEKLAHG 323
V +L++ L +P+ IDL ED+ + G
Sbjct: 272 ---VSRLAKSNLGRPMEIDASVPQIDLENEDDAEFDEG 306
>AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6462100-6463687
FORWARD LENGTH=315
Length = 315
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 128/275 (46%), Gaps = 50/275 (18%)
Query: 230 VVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQML----AVGFEEDVETILQTVPTG--R 283
++V T + ++ + R+ V+ LV+DE D + VG V +L + + R
Sbjct: 46 ILVATVASLCHMLEKHIFRIDSVRVLVVDEVDFLFYSSKQVG---SVRKLLTSFSSCDKR 102
Query: 284 QTMLFSATMP------------GWVKK-LSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVS 330
QT+ SA++P W K+ + +++ + + L L H + +
Sbjct: 103 QTVFASASIPQHKHFVHDCIQQKWTKRDVVHVHVSAIMPMPLC------LLHR---FVMC 153
Query: 331 ATTNSKRTMLSDLVTVYAKGGKTIVFT-----RTKKDADEVSLSL---------TNSIAS 376
TN + +L+ L + + I+F ++KK ++ S +L S+
Sbjct: 154 EKTNKHQVLLALLESDAPESA--IIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEI 211
Query: 377 EALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHR 436
L GD++ + R +L RQG +LV+TD+A+RG+D+P + +++LP ++HR
Sbjct: 212 LLLEGDMNFNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHR 271
Query: 437 SGRTGR---AGKEGTAILMYTSNQRRTVRSLEHDV 468
+GR GR + ++ + TS +R ++ E+++
Sbjct: 272 AGRAGRKPFSDRKCIVANLITSEERFVLQRYENEL 306
>AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr1:9708940-9713901 FORWARD LENGTH=911
Length = 911
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 347 YAKGGKTIVFTRTKKDADEVSLSLT-NSIASEALHGDISQHQRERTLNGFRQGKFTVLVA 405
Y + IV+ + + + D +S L N+I ++ H + R R F K V+VA
Sbjct: 483 YKEIRSIIVYCKFQYETDMISKYLRDNNINAKGYHSGLPAKDRVRIQESFCSNKIRVVVA 542
Query: 406 TDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSLE 465
T GLD +V VIH+ +P E +V GR GR G+ L Y ++ +RSL
Sbjct: 543 TVAFGMGLDKGDVGAVIHFSVPGSMEEYVQEIGRAGRDGRLSYCHLFYDNDTYLKLRSLA 602
Query: 466 HDVG 469
H G
Sbjct: 603 HSDG 606
>AT1G31360.1 | Symbols: RECQL2, ATRECQ2, MED34 | RECQ helicase L2 |
chr1:11232422-11237412 FORWARD LENGTH=705
Length = 705
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 347 YAKGGKTIVFTRTKKDADEVSLSL-TNSIASEALHGDISQHQRERTLNGFRQGKFTVLVA 405
Y+ IV+ ++K+ ++++ L I+++ H D+ + RE+ + + K V+V
Sbjct: 310 YSNNESGIVYCFSRKECEQIAGDLRERGISADYYHADMDANMREKVHMRWSKNKLQVIVG 369
Query: 406 TDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTS 455
T G++ P+V VIH+ L ET+ SGR GR G IL + S
Sbjct: 370 TVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECILFFRS 419
>AT1G31360.2 | Symbols: RECQL2, MED34 | RECQ helicase L2 |
chr1:11233174-11237412 FORWARD LENGTH=580
Length = 580
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 347 YAKGGKTIVFTRTKKDADEVSLSL-TNSIASEALHGDISQHQRERTLNGFRQGKFTVLVA 405
Y+ IV+ ++K+ ++++ L I+++ H D+ + RE+ + + K V+V
Sbjct: 185 YSNNESGIVYCFSRKECEQIAGDLRERGISADYYHADMDANMREKVHMRWSKNKLQVIVG 244
Query: 406 TDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTS 455
T G++ P+V VIH+ L ET+ SGR GR G IL + S
Sbjct: 245 TVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECILFFRS 294
>AT4G35740.1 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helicase
family protein | chr4:16936233-16940172 FORWARD
LENGTH=713
Length = 713
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Query: 354 IVFTRTKKDADEVSLSLTN-SIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRG 412
I++ + D++S+ L++ I+S A H ++ R L+ + K ++VAT G
Sbjct: 260 IIYCLERTTCDDLSVHLSSIGISSAAYHAGLNSKMRSTVLDDWLSSKKQIIVATVAFGMG 319
Query: 413 LDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSL 464
+D +V +V H+ +P E+F SGR GR ++L Y + R+ + L
Sbjct: 320 IDKKDVRMVCHFNIPKSMESFYQESGRAGRDQLPSRSVLYYGVDDRKKMEYL 371
>AT4G35740.2 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helicase
family protein | chr4:16936788-16940172 FORWARD
LENGTH=620
Length = 620
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Query: 354 IVFTRTKKDADEVSLSLTN-SIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRG 412
I++ + D++S+ L++ I+S A H ++ R L+ + K ++VAT G
Sbjct: 167 IIYCLERTTCDDLSVHLSSIGISSAAYHAGLNSKMRSTVLDDWLSSKKQIIVATVAFGMG 226
Query: 413 LDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSL 464
+D +V +V H+ +P E+F SGR GR ++L Y + R+ + L
Sbjct: 227 IDKKDVRMVCHFNIPKSMESFYQESGRAGRDQLPSRSVLYYGVDDRKKMEYL 278
>AT1G35530.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr1:13089994-13097078 FORWARD LENGTH=1324
Length = 1324
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 18/139 (12%)
Query: 317 EEKLAHGIKLYAVSATTNSKRTMLSDLVTVY-AKGGKTIVFTRTKKDADEVSLSLTN--- 372
+++L+HG A S + +L D V K + I+F+ + ++ +L+N
Sbjct: 437 QQRLSHG----APSPKLSKMLEILVDHFKVKDPKTSRVIIFSNFRGSVRDIMNALSNIGD 492
Query: 373 ---------SIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIH 423
+ + L G SQ ++ L FR G F V+VAT + GLDI VDLVI
Sbjct: 493 MVKATEFIGQSSGKTLKGQ-SQKIQQAVLEKFRAGGFNVIVATSIGEEGLDIMEVDLVIC 551
Query: 424 YELPNDPETFVHRSGRTGR 442
++ P + R GRTGR
Sbjct: 552 FDANVSPLRMIQRMGRTGR 570
>AT1G35530.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr1:13089994-13097078 FORWARD LENGTH=1390
Length = 1390
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 18/139 (12%)
Query: 317 EEKLAHGIKLYAVSATTNSKRTMLSDLVTVY-AKGGKTIVFTRTKKDADEVSLSLTN--- 372
+++L+HG A S + +L D V K + I+F+ + ++ +L+N
Sbjct: 437 QQRLSHG----APSPKLSKMLEILVDHFKVKDPKTSRVIIFSNFRGSVRDIMNALSNIGD 492
Query: 373 ---------SIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIH 423
+ + L G SQ ++ L FR G F V+VAT + GLDI VDLVI
Sbjct: 493 MVKATEFIGQSSGKTLKGQ-SQKIQQAVLEKFRAGGFNVIVATSIGEEGLDIMEVDLVIC 551
Query: 424 YELPNDPETFVHRSGRTGR 442
++ P + R GRTGR
Sbjct: 552 FDANVSPLRMIQRMGRTGR 570
>AT3G02060.1 | Symbols: | DEAD/DEAH box helicase, putative |
chr3:354409-358319 FORWARD LENGTH=823
Length = 823
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 9/91 (9%)
Query: 380 HGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETF-----V 434
HG Q E T+ F QGK +L+ T++ GLDI N + +I D + F
Sbjct: 513 HGKQYSKQLEETMERFAQGKIKILICTNIVESGLDIQNANTIII----QDVQQFGLAQLY 568
Query: 435 HRSGRTGRAGKEGTAILMYTSNQRRTVRSLE 465
GR GRA KE A L Y + ++LE
Sbjct: 569 QLRGRVGRADKEAHAYLFYPDKSLLSDQALE 599
>AT3G02060.2 | Symbols: | DEAD/DEAH box helicase, putative |
chr3:354412-358319 FORWARD LENGTH=822
Length = 822
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 9/91 (9%)
Query: 380 HGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETF-----V 434
HG Q E T+ F QGK +L+ T++ GLDI N + +I D + F
Sbjct: 512 HGKQYSKQLEETMERFAQGKIKILICTNIVESGLDIQNANTIII----QDVQQFGLAQLY 567
Query: 435 HRSGRTGRAGKEGTAILMYTSNQRRTVRSLE 465
GR GRA KE A L Y + ++LE
Sbjct: 568 QLRGRVGRADKEAHAYLFYPDKSLLSDQALE 598