Miyakogusa Predicted Gene

Lj5g3v1533500.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1533500.1 Non Chatacterized Hit- tr|I1JR03|I1JR03_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,65.12,2e-18,seg,NULL,CUFF.55469.1
         (117 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G26731.1 | Symbols:  | unknown protein; Has 30201 Blast hits ...    50   4e-07

>AT5G26731.1 | Symbols:  | unknown protein; Has 30201 Blast hits
          to 17322 proteins in 780 species: Archae - 12; Bacteria
          - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037;
          Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
          BLink). | chr5:9295676-9295975 FORWARD LENGTH=99
          Length = 99

 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 24/41 (58%), Positives = 32/41 (78%)

Query: 33 MEKRQLFLRSYQFCQKKSFTERIKGSLIRAKKVLWLRLWSS 73
          MEKRQLFLRSYQF +K+SF E++  S+ R K+V+  RL S+
Sbjct: 24 MEKRQLFLRSYQFSRKQSFAEKVSRSVTRVKRVVLTRLRSA 64