Miyakogusa Predicted Gene

Lj5g3v1531170.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1531170.1 Non Chatacterized Hit- tr|I1NEV8|I1NEV8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,46.39,0.00000000000003,seg,NULL; zf-U1,Zinc finger, U1-C type;
zf-CCCH,Zinc finger, CCCH-type; no description,NULL; zinc
fi,CUFF.55424.1
         (137 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G26749.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily...    69   1e-12
AT5G26749.2 | Symbols:  | C2H2 and C2HC zinc fingers superfamily...    60   3e-10

>AT5G26749.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily
           protein | chr5:9398285-9399239 REVERSE LENGTH=147
          Length = 147

 Score = 68.6 bits (166), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 60/151 (39%), Gaps = 18/151 (11%)

Query: 1   MPQRKFYCDYCDKLFQDTPGDRKRHARGIQHQQAKARWYDSIKXXXXXXXXXXXXXXXXX 60
           MP  K+YCDYC+K FQDT   RKRH +   H +AKA WY S                   
Sbjct: 1   MPSGKYYCDYCEKEFQDTQVARKRHLQSKPHLRAKALWYSS----SSSDLVNPQVSNFAT 56

Query: 61  XXXXXXXVNTGFCRYGDSCNYIHPN--------ANNMQQQPAIISTQ----GNVVRD--S 106
                  + + FC +GDSC Y HPN         NN Q +  +++ Q      + RD  S
Sbjct: 57  KGLCNRFITSNFCPFGDSCRYFHPNNNTGSTGFTNNTQLRVDMLNQQHIQGSTLNRDFVS 116

Query: 107 MGMGVSWXXXXXXXXXXXXXXXXXXXFVDWG 137
              G  W                   F+DWG
Sbjct: 117 GRPGTGWFDLPPSLKPPPEQGYPQLPFIDWG 147


>AT5G26749.2 | Symbols:  | C2H2 and C2HC zinc fingers superfamily
           protein | chr5:9398285-9399239 REVERSE LENGTH=166
          Length = 166

 Score = 60.5 bits (145), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 58/166 (34%), Gaps = 29/166 (17%)

Query: 1   MPQRKFYCDYCDKLFQDTPGDRKRHARGIQHQQAKARWYDSIKXXXXXXXXXXXXXX--- 57
           MP  K+YCDYC+K FQDT   RKRH +   H +AKA WY S                   
Sbjct: 1   MPSGKYYCDYCEKEFQDTQVARKRHLQSKPHLRAKALWYSSSSSDLVNPQVSNFATKGLC 60

Query: 58  ------------XXXXXXXXXXVNTGFCRYGDSCNYIHPN--------ANNMQQQPAIIS 97
                                     FC +GDSC Y HPN         NN Q +  +++
Sbjct: 61  NRFITSVRRIDFVSLCSSFLAISGCNFCPFGDSCRYFHPNNNTGSTGFTNNTQLRVDMLN 120

Query: 98  TQ----GNVVRDSMG--MGVSWXXXXXXXXXXXXXXXXXXXFVDWG 137
            Q      + RD +    G  W                   F+DWG
Sbjct: 121 QQHIQGSTLNRDFVSGRPGTGWFDLPPSLKPPPEQGYPQLPFIDWG 166