Miyakogusa Predicted Gene
- Lj5g3v1530110.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1530110.1 Non Chatacterized Hit- tr|I1LB20|I1LB20_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.22371
PE,91.2,0,AAA_21,NULL; no description,NULL; P-loop containing
nucleoside triphosphate hydrolases,NULL; SUBFAMI,CUFF.55425.1
(261 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G02270.1 | Symbols: ATNAP9, NAP9 | non-intrinsic ABC protein ... 431 e-121
AT5G02270.2 | Symbols: NAP9 | non-intrinsic ABC protein 9 | chr5... 415 e-116
AT5G44110.1 | Symbols: ATPOP1, ATNAP2, POP1 | P-loop containing ... 268 2e-72
AT1G03905.1 | Symbols: | P-loop containing nucleoside triphosph... 263 9e-71
AT5G44110.2 | Symbols: ATPOP1, ATNAP2, POP1 | P-loop containing ... 206 9e-54
AT5G44110.3 | Symbols: ATPOP1, ATNAP2, POP1 | P-loop containing ... 179 2e-45
AT4G33460.1 | Symbols: ATNAP13, EMB2751 | ABC transporter family... 52 5e-07
AT3G62150.1 | Symbols: PGP21 | P-glycoprotein 21 | chr3:23008755... 51 9e-07
AT3G47740.1 | Symbols: ATATH2, ATH2, ABCA3 | ABC2 homolog 2 | ch... 49 3e-06
AT4G18050.1 | Symbols: PGP9 | P-glycoprotein 9 | chr4:10022205-... 49 3e-06
AT2G47000.1 | Symbols: MDR4, PGP4, ABCB4, ATPGP4 | ATP binding c... 49 4e-06
AT2G41700.1 | Symbols: ABCA1, AtABCA1 | ATP-binding cassette A1 ... 48 5e-06
AT5G46540.1 | Symbols: PGP7 | P-glycoprotein 7 | chr5:18877192-... 48 7e-06
AT2G41700.2 | Symbols: ABCA1, AtABCA1 | ATP-binding cassette A1 ... 48 7e-06
>AT5G02270.1 | Symbols: ATNAP9, NAP9 | non-intrinsic ABC protein 9 |
chr5:467269-469041 REVERSE LENGTH=328
Length = 328
Score = 431 bits (1107), Expect = e-121, Method: Compositional matrix adjust.
Identities = 208/250 (83%), Positives = 223/250 (89%)
Query: 10 DATVVIRDLRFTYPGIDGHPPPGSTPLIQDFCLTLHSGDRCLLVGSNGAGKTTILKILGG 69
++TV I LRFTYPGIDGHPPPGS PLI+DF +TL+S DRCLLVGSNGAGKTTILKILGG
Sbjct: 11 NSTVEISGLRFTYPGIDGHPPPGSKPLIEDFSITLNSSDRCLLVGSNGAGKTTILKILGG 70
Query: 70 KHMVEPEMVRVLGRSAFHDTGLSSSGDLCYLGGEWRRDVAFAGFGVSIQMDISAEKMIFG 129
KHMVEP MVRVLGRSAFHDTGL+SSGDLCYLGGEWRRDVAFAGF V IQMDISAEKMIFG
Sbjct: 71 KHMVEPHMVRVLGRSAFHDTGLTSSGDLCYLGGEWRRDVAFAGFEVPIQMDISAEKMIFG 130
Query: 130 VGGINPERRAELIKVLGIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITXXXXXX 189
V GI+P+RR ELIKVL ID+SWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEIT
Sbjct: 131 VAGIDPQRRDELIKVLDIDISWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVL 190
Query: 190 XXXXXXSFLKKECDERGATIIYATHIFDGLEDWPTHMVYVAHGKLQLAMPMDKVKENSKL 249
FL+KEC+ERGATIIYATHIFDGLEDWPTH+VYVA+GKLQLA+PM+KVKE SK
Sbjct: 191 ARADLLKFLRKECEERGATIIYATHIFDGLEDWPTHIVYVANGKLQLALPMEKVKETSKK 250
Query: 250 SLMRTVESWL 259
SLMRTVESWL
Sbjct: 251 SLMRTVESWL 260
>AT5G02270.2 | Symbols: NAP9 | non-intrinsic ABC protein 9 |
chr5:467269-469041 REVERSE LENGTH=354
Length = 354
Score = 415 bits (1067), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/276 (75%), Positives = 223/276 (80%), Gaps = 26/276 (9%)
Query: 10 DATVVIRDLRFTYPGIDGHPPPGSTPLIQDFCLTLHSGDRCLLVGSNGAGKTTILKILGG 69
++TV I LRFTYPGIDGHPPPGS PLI+DF +TL+S DRCLLVGSNGAGKTTILKILGG
Sbjct: 11 NSTVEISGLRFTYPGIDGHPPPGSKPLIEDFSITLNSSDRCLLVGSNGAGKTTILKILGG 70
Query: 70 KHMVEPEMVRVLGRSAFHDTGLSSSGDLCYLGGEWRRDVAFAGFGVSIQMDISAEKMIFG 129
KHMVEP MVRVLGRSAFHDTGL+SSGDLCYLGGEWRRDVAFAGF V IQMDISAEKMIFG
Sbjct: 71 KHMVEPHMVRVLGRSAFHDTGLTSSGDLCYLGGEWRRDVAFAGFEVPIQMDISAEKMIFG 130
Query: 130 VGGINPERRAELIK--------------------------VLGIDLSWRLHKVSDGQRRR 163
V GI+P+RR ELIK VL ID+SWRLHKVSDGQRRR
Sbjct: 131 VAGIDPQRRDELIKLEHGLIFDLCHIPNLRALHCLEYYYSVLDIDISWRLHKVSDGQRRR 190
Query: 164 VQICMGLLKPFKVLLLDEITXXXXXXXXXXXXSFLKKECDERGATIIYATHIFDGLEDWP 223
VQICMGLLKPFKVLLLDEIT FL+KEC+ERGATIIYATHIFDGLEDWP
Sbjct: 191 VQICMGLLKPFKVLLLDEITVDLDVLARADLLKFLRKECEERGATIIYATHIFDGLEDWP 250
Query: 224 THMVYVAHGKLQLAMPMDKVKENSKLSLMRTVESWL 259
TH+VYVA+GKLQLA+PM+KVKE SK SLMRTVESWL
Sbjct: 251 THIVYVANGKLQLALPMEKVKETSKKSLMRTVESWL 286
>AT5G44110.1 | Symbols: ATPOP1, ATNAP2, POP1 | P-loop containing
nucleoside triphosphate hydrolases superfamily protein |
chr5:17754222-17755672 REVERSE LENGTH=282
Length = 282
Score = 268 bits (686), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 138/262 (52%), Positives = 178/262 (67%), Gaps = 11/262 (4%)
Query: 1 MSINGNSVTDATVVIRDLRFTYPGIDGHPPPGSTPLIQDFCLTLHSGDRCLLVGSNGAGK 60
M+ S D + + ++F+Y D P+ DF L L +G RCLLVG+NG+GK
Sbjct: 1 MAEKNASAVDGAIRVSGMQFSYDVQD--------PIFFDFNLDLPAGSRCLLVGANGSGK 52
Query: 61 TTILKILGGKHMVE-PEMVRVLGRSAFHDTGLSSSGDLCYLGGEWRRDVAFAGFGVSIQM 119
TT+LKIL GKHMV +V+VL RSAFHDT L SGDL YLGG W + AG + +Q
Sbjct: 53 TTLLKILAGKHMVGGKNVVQVLDRSAFHDTELVCSGDLSYLGGSWSKTAGSAG-DIPLQG 111
Query: 120 DISAEKMIFGVGGINPERRAELIKVLGIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLL 179
D SAE MIFGV GI+P RR +LI +L I+L WR+HKVSDGQRRRVQICMGLL PFKVLLL
Sbjct: 112 DFSAEHMIFGVEGIDPFRREKLIDLLDINLQWRMHKVSDGQRRRVQICMGLLHPFKVLLL 171
Query: 180 DEITXXXXXXXXXXXXSFLKKECDERGATIIYATHIFDGLEDWPTHMVYVAHGKLQLAMP 239
DE+T F K+EC++RGATI+YATHIFDGLE W +H+ Y+ G+L+L+
Sbjct: 172 DEVTVDLDVVARMDLLEFFKEECEQRGATIVYATHIFDGLETWASHLAYINGGELKLSAK 231
Query: 240 MDKVKE-NSKLSLMRTVESWLR 260
+D++K+ + +L+ VE+WLR
Sbjct: 232 LDEIKDLKTSPNLLSVVEAWLR 253
>AT1G03905.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:993478-995594
FORWARD LENGTH=290
Length = 290
Score = 263 bits (672), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 138/253 (54%), Positives = 169/253 (66%), Gaps = 11/253 (4%)
Query: 10 DATVVIRDLRFTYPGIDGHPPPGSTPLIQDFCLTLHSGDRCLLVGSNGAGKTTILKILGG 69
D + + ++F Y D P+ DF L L +G RCLLVG+NG+GKTT+LKIL G
Sbjct: 11 DDAIRVSGMQFAYEVED--------PIFFDFNLDLPAGSRCLLVGANGSGKTTLLKILAG 62
Query: 70 KHMVE-PEMVRVLGRSAFHDTGLSSSGDLCYLGGEWRRDVAFAGFGVSIQMDISAEKMIF 128
KHMV +V+VL RSAFHDT L SGDL YLGG W + V AG V +Q D SAE MIF
Sbjct: 63 KHMVGGKNVVQVLSRSAFHDTQLVCSGDLSYLGGSWSKTVGSAG-EVPLQGDFSAEHMIF 121
Query: 129 GVGGINPERRAELIKVLGIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITXXXXX 188
GV G +P RR +LI +L I+L WR+HKVSDGQ+RRVQICMGLL PFKVLLLDE+T
Sbjct: 122 GVEGTDPVRREKLIDLLDINLQWRMHKVSDGQKRRVQICMGLLHPFKVLLLDEVTVDLDV 181
Query: 189 XXXXXXXSFLKKECDERGATIIYATHIFDGLEDWPTHMVYVAHGKLQLAMPMDKVKE-NS 247
F K+ECD+RGATI+YATHIFDGLE W TH+ Y+ G+L M ++E +
Sbjct: 182 VARMDLLEFFKEECDQRGATIVYATHIFDGLETWATHLAYIQDGELNRLSKMTDIEELKT 241
Query: 248 KLSLMRTVESWLR 260
+L+ VESWLR
Sbjct: 242 SPNLLSVVESWLR 254
>AT5G44110.2 | Symbols: ATPOP1, ATNAP2, POP1 | P-loop containing
nucleoside triphosphate hydrolases superfamily protein |
chr5:17754424-17755672 REVERSE LENGTH=214
Length = 214
Score = 206 bits (525), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 111/216 (51%), Positives = 138/216 (63%), Gaps = 10/216 (4%)
Query: 1 MSINGNSVTDATVVIRDLRFTYPGIDGHPPPGSTPLIQDFCLTLHSGDRCLLVGSNGAGK 60
M+ S D + + ++F+Y D P+ DF L L +G RCLLVG+NG+GK
Sbjct: 1 MAEKNASAVDGAIRVSGMQFSYDVQD--------PIFFDFNLDLPAGSRCLLVGANGSGK 52
Query: 61 TTILKILGGKHMVE-PEMVRVLGRSAFHDTGLSSSGDLCYLGGEWRRDVAFAGFGVSIQM 119
TT+LKIL GKHMV +V+VL RSAFHDT L SGDL YLGG W + AG + +Q
Sbjct: 53 TTLLKILAGKHMVGGKNVVQVLDRSAFHDTELVCSGDLSYLGGSWSKTAGSAG-DIPLQG 111
Query: 120 DISAEKMIFGVGGINPERRAELIKVLGIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLL 179
D SAE MIFGV GI+P RR +LI +L I+L WR+HKVSDGQRRRVQICMGLL PFKVLLL
Sbjct: 112 DFSAEHMIFGVEGIDPFRREKLIDLLDINLQWRMHKVSDGQRRRVQICMGLLHPFKVLLL 171
Query: 180 DEITXXXXXXXXXXXXSFLKKECDERGATIIYATHI 215
DE+T F K+EC++R I ++
Sbjct: 172 DEVTVDLDVVARMDLLEFFKEECEQRSYNCICNSYF 207
>AT5G44110.3 | Symbols: ATPOP1, ATNAP2, POP1 | P-loop containing
nucleoside triphosphate hydrolases superfamily protein |
chr5:17754392-17755672 REVERSE LENGTH=223
Length = 223
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/175 (54%), Positives = 118/175 (67%), Gaps = 10/175 (5%)
Query: 1 MSINGNSVTDATVVIRDLRFTYPGIDGHPPPGSTPLIQDFCLTLHSGDRCLLVGSNGAGK 60
M+ S D + + ++F+Y D P+ DF L L +G RCLLVG+NG+GK
Sbjct: 1 MAEKNASAVDGAIRVSGMQFSYDVQD--------PIFFDFNLDLPAGSRCLLVGANGSGK 52
Query: 61 TTILKILGGKHMVE-PEMVRVLGRSAFHDTGLSSSGDLCYLGGEWRRDVAFAGFGVSIQM 119
TT+LKIL GKHMV +V+VL RSAFHDT L SGDL YLGG W + AG + +Q
Sbjct: 53 TTLLKILAGKHMVGGKNVVQVLDRSAFHDTELVCSGDLSYLGGSWSKTAGSAG-DIPLQG 111
Query: 120 DISAEKMIFGVGGINPERRAELIKVLGIDLSWRLHKVSDGQRRRVQICMGLLKPF 174
D SAE MIFGV GI+P RR +LI +L I+L WR+HKVSDGQRRRVQICMGLL P+
Sbjct: 112 DFSAEHMIFGVEGIDPFRREKLIDLLDINLQWRMHKVSDGQRRRVQICMGLLHPY 166
>AT4G33460.1 | Symbols: ATNAP13, EMB2751 | ABC transporter family
protein | chr4:16098325-16100113 REVERSE LENGTH=271
Length = 271
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 33 STPLIQDFCLTLHSGDRCLLVGSNGAGKTTILKILGGKHMVEPEMVRVLGRSAFHDTGLS 92
S P+++D + SG +++G NG GK+T+LKIL G +V P
Sbjct: 56 SVPILRDCSFRIPSGQLWMILGPNGCGKSTLLKILAG--VVNP----------------- 96
Query: 93 SSGDLCYLGGEWRRDVAFAGFGVSIQMDISAEKMIFGVGGIN----PERRAELIKVLGI- 147
SSG + E ++ F + M + FG+G + E ++ +IK L
Sbjct: 97 SSGTVFV---EKPKNFVFQNPDHQVVMPTVEADVAFGLGKYHDMNQEEVKSRVIKALEAV 153
Query: 148 ---DLSWR-LHKVSDGQRRRVQICMGLLKPFKVLLLDEITXXXXXXXXXXXXSFLKKECD 203
D R + +S GQ++R+ I L + KVLLLDE+T +K +
Sbjct: 154 GMRDYMQRPIQTLSGGQKQRIAIAGALAEACKVLLLDELTTFLDESDQMGVIKAVKDLIN 213
Query: 204 ER--GATIIYATHIFDGLEDWPTHMVYVAHGKL 234
+ T ++ TH + L+ + VY+ +G++
Sbjct: 214 AKKGDVTALWVTHRLEELK-YADGAVYMENGRV 245
>AT3G62150.1 | Symbols: PGP21 | P-glycoprotein 21 |
chr3:23008755-23013579 REVERSE LENGTH=1296
Length = 1296
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 87/180 (48%), Gaps = 25/180 (13%)
Query: 15 IRDLRFTYPGIDGHPPPGSTPLIQDFCLTLHSGDRCLLVGSNGAGKTTILKIL------- 67
+R + F YP P + QD CL++ +G LVG +G+GK+T++ +L
Sbjct: 1054 LRHISFKYPS---RP---DVQIFQDLCLSIRAGKTIALVGESGSGKSTVIALLQRFYDPD 1107
Query: 68 GGKHMVEPEMVRVLGRSAF-HDTGLSSSGDLCYLGGEWRRDVAFAGFGVSIQMDI-SAEK 125
G+ ++ ++ L TGL S + + R ++A+ G + + +I SA +
Sbjct: 1108 SGQITLDGVEIKTLQLKWLRQQTGLVSQEPVLF-NETIRANIAYGKGGDATETEIVSAAE 1166
Query: 126 MIFGVGGINPERRAELIKVLGID--LSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEIT 183
+ G I+ ++ G D + R ++S GQ++RV I ++K KVLLLDE T
Sbjct: 1167 LSNAHGFISGLQQ-------GYDTMVGERGVQLSGGQKQRVAIARAIVKDPKVLLLDEAT 1219
>AT3G47740.1 | Symbols: ATATH2, ATH2, ABCA3 | ABC2 homolog 2 |
chr3:17600651-17604965 FORWARD LENGTH=932
Length = 932
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 99/248 (39%), Gaps = 44/248 (17%)
Query: 7 SVTDATVVIRDLRFTYPGIDGHPPPGSTPLIQDFCLTLHSGDRCLLVGSNGAGKTTILKI 66
S T +V LR YPG DG+PP + ++ L + SG+ ++G NGAGKT+ + +
Sbjct: 604 SSTSHAIVCDKLRKVYPGRDGNPPKKAVRVLS---LAVPSGECFGMLGPNGAGKTSFINM 660
Query: 67 LGGKHMVEPEMVRVLGRSAFHDTGLSSSGDLCYLGGEWRRDVAFAGFGVSIQMDISAEKM 126
+ G +V+ +AF GL D+ D + GV Q D+ E +
Sbjct: 661 MTG-------LVKPTSGAAFVQ-GLDICKDM---------DRVYTSMGVCPQHDLLWETL 703
Query: 127 IFGVGGINPERRAELIKVLGIDLSWRLH-------------------KVSDGQRRRVQIC 167
G + L + G+DL+ + K S G +RR+ +
Sbjct: 704 ---TGREHLLFYGRLKNLKGVDLNQAVEESLRSVNLFHGGVADKPAGKYSGGMKRRLSVA 760
Query: 168 MGLLKPFKVLLLDEITXXXXXXXXXXXXSFLKKECDERGATIIYATHIFDGLEDWPTHMV 227
+ L+ KV+ +DE + + +K +R II TH + E +
Sbjct: 761 ISLIGNPKVVYMDEPSTGLDPASRKNLWTVIKNA--KRHTAIILTTHSMEEAEFLCDRLG 818
Query: 228 YVAHGKLQ 235
G+LQ
Sbjct: 819 IFVDGRLQ 826
>AT4G18050.1 | Symbols: PGP9 | P-glycoprotein 9 |
chr4:10022205-10027280 FORWARD LENGTH=1236
Length = 1236
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 1 MSINGNSVTDATVVIRDLRFTYPGIDGHPPPGST-----------------------PLI 37
M+ + N D+ I D+ + P ID G+T +
Sbjct: 952 MAPDSNKAKDSAASIFDILDSTPKIDSSSDEGTTLQNVNGDIEFRHVSFRYPMRPDVQIF 1011
Query: 38 QDFCLTLHSGDRCLLVGSNGAGKTTILKIL-------GGKHMVEPEMVRVLGRSAF-HDT 89
+D CLT+ SG LVG +G+GK+T++ ++ GK +++ ++ S
Sbjct: 1012 RDLCLTIPSGKTVALVGESGSGKSTVISMIERFYNPDSGKILIDQVEIQTFKLSWLRQQM 1071
Query: 90 GLSSSGDLCYLGGEWRRDVAFAGFGVSIQMDISAEKMIFGVGGINPERRAELIKVL--GI 147
GL S + + R ++A+ G + + +I + I L G
Sbjct: 1072 GLVSQEPILF-NETIRSNIAYGKTGGATEEEI--------IAAAKAANAHNFISSLPQGY 1122
Query: 148 DLSW--RLHKVSDGQRRRVQICMGLLKPFKVLLLDEIT 183
D S R ++S GQ++R+ I +LK K+LLLDE T
Sbjct: 1123 DTSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEAT 1160
>AT2G47000.1 | Symbols: MDR4, PGP4, ABCB4, ATPGP4 | ATP binding
cassette subfamily B4 | chr2:19310008-19314750 REVERSE
LENGTH=1286
Length = 1286
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 23/179 (12%)
Query: 15 IRDLRFTYPGIDGHPPPGSTPLIQDFCLTLHSGDRCLLVGSNGAGKTTILKILGGKHMVE 74
+R + F YP P + QD CL++ +G LVG +G+GK+T++ +L + +
Sbjct: 1044 LRHVSFKYPA---RP---DVQIFQDLCLSIRAGKTVALVGESGSGKSTVIALL--QRFYD 1095
Query: 75 P----------EMVRVLGRSAFHDTGLSSSGDLCYLGGEWRRDVAFAGFGVSIQMDISAE 124
P E+ + + TGL S + + R ++A+ G + + +I +
Sbjct: 1096 PDSGEITLDGVEIKSLRLKWLRQQTGLVSQEPILF-NETIRANIAYGKGGDASESEIVSS 1154
Query: 125 KMIFGVGGINPERRAELIKVLGIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEIT 183
+ G + ++G R ++S GQ++RV I ++K KVLLLDE T
Sbjct: 1155 AELSNAHGFISGLQQGYDTMVG----ERGIQLSGGQKQRVAIARAIVKDPKVLLLDEAT 1209
>AT2G41700.1 | Symbols: ABCA1, AtABCA1 | ATP-binding cassette A1 |
chr2:17383239-17396110 REVERSE LENGTH=1882
Length = 1882
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 81/178 (45%), Gaps = 18/178 (10%)
Query: 10 DATVVIRDLRFTYPGIDGHPPPGSTPLIQDFCLTLHSGDRCLLVGSNGAGKTTILKILGG 69
+ + +++LR YPG H P + +Q ++ +G+ +G+NGAGKTT L +L G
Sbjct: 1450 NTMLYLQNLRKVYPGDKHHGPKVA---VQSLTFSVQAGECFGFLGTNGAGKTTTLSMLSG 1506
Query: 70 KHMVEPEMVRVLGRSAFHDTGLSSSGDLCYLGGEWRRDVAFAGFGVSIQMDISAEKMIFG 129
+ + G+ D S ++G + D F V +++ A
Sbjct: 1507 EETPTSGTAFIFGK----DIVASPKAIRQHIGYCPQFDALFEYLTVKEHLELYAR----- 1557
Query: 130 VGGINPERRAELI--KVLGIDLSWRLHK----VSDGQRRRVQICMGLLKPFKVLLLDE 181
+ G+ R ++ K++ DL HK +S G +R++ + + ++ +++LDE
Sbjct: 1558 IKGVVDHRIDNVVTEKLVEFDLLKHSHKPSFTLSGGNKRKLSVAIAMIGDPPIVILDE 1615
>AT5G46540.1 | Symbols: PGP7 | P-glycoprotein 7 |
chr5:18877192-18882347 REVERSE LENGTH=1248
Length = 1248
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 89/214 (41%), Gaps = 36/214 (16%)
Query: 1 MSINGNSVTDATVVIRDLRFTYPGIDGHPPPGST--------------------PLIQ-- 38
M+ + N D+ I D+ + P ID G+ P IQ
Sbjct: 964 MAPDINKAKDSAASIFDILDSKPKIDSSSEKGTILPIVHGDIELQHVSFRYPMRPDIQIF 1023
Query: 39 -DFCLTLHSGDRCLLVGSNGAGKTTILKIL-------GGKHMVEPEMVRVLGRSAFHDTG 90
D CLT+ SG LVG +G+GK+T++ +L GK +++ ++ L S +
Sbjct: 1024 SDLCLTISSGQTVALVGESGSGKSTVISLLERFYDPDSGKILLDQVEIQSLKLSWLREQM 1083
Query: 91 LSSSGDLCYLGGEWRRDVAFAGFGVSIQMDISAEKMIFGVGGINPERR-AELIKVLGIDL 149
S + ++A+ G + + E++I N + L + +
Sbjct: 1084 GLVSQEPVLFNETIGSNIAYGKIGGATE-----EEIITAAKAANVHNFISSLPQGYETSV 1138
Query: 150 SWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEIT 183
R ++S GQ++R+ I +LK K+LLLDE T
Sbjct: 1139 GERGVQLSGGQKQRIAIARAILKDPKILLLDEAT 1172
>AT2G41700.2 | Symbols: ABCA1, AtABCA1 | ATP-binding cassette A1 |
chr2:17383239-17395932 REVERSE LENGTH=1846
Length = 1846
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 81/178 (45%), Gaps = 18/178 (10%)
Query: 10 DATVVIRDLRFTYPGIDGHPPPGSTPLIQDFCLTLHSGDRCLLVGSNGAGKTTILKILGG 69
+ + +++LR YPG H P + +Q ++ +G+ +G+NGAGKTT L +L G
Sbjct: 1408 NTMLYLQNLRKVYPGDKHHGPKVA---VQSLTFSVQAGECFGFLGTNGAGKTTTLSMLSG 1464
Query: 70 KHMVEPEMVRVLGRSAFHDTGLSSSGDLCYLGGEWRRDVAFAGFGVSIQMDISAEKMIFG 129
+ + G+ D S ++G + D F V +++ A
Sbjct: 1465 EETPTSGTAFIFGK----DIVASPKAIRQHIGYCPQFDALFEYLTVKEHLELYAR----- 1515
Query: 130 VGGINPERRAELI--KVLGIDLSWRLHK----VSDGQRRRVQICMGLLKPFKVLLLDE 181
+ G+ R ++ K++ DL HK +S G +R++ + + ++ +++LDE
Sbjct: 1516 IKGVVDHRIDNVVTEKLVEFDLLKHSHKPSFTLSGGNKRKLSVAIAMIGDPPIVILDE 1573