Miyakogusa Predicted Gene
- Lj5g3v1530040.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1530040.1 tr|Q65XP2|Q65XP2_ORYSJ Os05g0153400 protein
OS=Oryza sativa subsp. japonica GN=OSJNBa0072C16.19
PE=2,34.08,7e-19,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; PPR: pentatricopeptide repeat domain,P,CUFF.55414.1
(301 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 331 4e-91
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 1e-40
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 162 4e-40
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 158 5e-39
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 6e-39
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 7e-39
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 156 2e-38
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 2e-38
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 8e-38
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 1e-37
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 2e-37
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 151 5e-37
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 2e-36
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 149 2e-36
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 3e-36
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 7e-36
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 3e-35
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 4e-35
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 7e-35
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 7e-35
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 144 1e-34
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 1e-34
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 1e-34
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 3e-34
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 3e-34
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 142 3e-34
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 4e-34
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 141 4e-34
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 5e-34
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 141 7e-34
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 8e-34
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 140 1e-33
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 1e-33
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 3e-33
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 3e-33
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 4e-33
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 4e-33
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 4e-33
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 4e-33
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 136 1e-32
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 135 3e-32
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 3e-32
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 4e-32
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 135 4e-32
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 4e-32
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 7e-32
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 9e-32
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 2e-31
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 2e-31
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 3e-31
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 3e-31
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 132 3e-31
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 4e-31
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 132 4e-31
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 131 5e-31
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 131 6e-31
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 6e-31
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 7e-31
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 131 7e-31
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 130 8e-31
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 1e-30
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 1e-30
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 1e-30
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 2e-30
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 3e-30
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 3e-30
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 4e-30
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 5e-30
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 5e-30
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 128 5e-30
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 8e-30
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 126 2e-29
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 2e-29
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 6e-29
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 124 7e-29
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 124 1e-28
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 1e-28
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 1e-28
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 123 1e-28
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 3e-28
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 4e-28
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 4e-28
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 122 4e-28
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 121 5e-28
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 5e-28
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 8e-28
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 120 1e-27
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 1e-27
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 119 2e-27
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 2e-27
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 3e-27
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 119 3e-27
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 119 3e-27
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 3e-27
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 118 5e-27
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 7e-27
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 1e-26
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 1e-26
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 2e-26
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 116 2e-26
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 2e-26
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 2e-26
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 115 2e-26
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 3e-26
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 3e-26
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 3e-26
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 4e-26
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 4e-26
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 4e-26
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 114 6e-26
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 7e-26
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 8e-26
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 9e-26
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 9e-26
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 114 1e-25
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 113 1e-25
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 113 2e-25
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 2e-25
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 2e-25
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 2e-25
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 2e-25
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 3e-25
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 4e-25
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 4e-25
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 4e-25
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 5e-25
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 5e-25
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 7e-25
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 2e-24
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 2e-24
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 2e-24
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 2e-24
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 3e-24
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 3e-24
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 3e-24
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 4e-24
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 5e-24
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 7e-24
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 8e-24
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 1e-23
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 1e-23
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 107 1e-23
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 2e-23
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 5e-23
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 8e-23
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 9e-23
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 1e-22
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 1e-22
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 2e-22
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 6e-22
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 6e-22
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 1e-21
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 2e-21
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 4e-21
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 6e-21
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 6e-21
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 6e-21
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 6e-21
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 6e-21
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 6e-21
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 7e-21
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 8e-21
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 2e-20
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 96 2e-20
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 5e-20
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 9e-20
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 1e-19
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 2e-19
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 92 4e-19
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 92 5e-19
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 7e-19
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 8e-19
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 2e-18
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 2e-18
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 89 3e-18
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 5e-18
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 88 6e-18
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 1e-17
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 4e-17
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 86 4e-17
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 2e-16
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 2e-16
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 4e-16
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 6e-15
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 4e-13
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 70 1e-12
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 2e-12
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 2e-12
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 5e-12
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 1e-11
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 5e-11
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 9e-11
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 1e-10
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 60 2e-09
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 60 2e-09
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 3e-09
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 4e-09
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 6e-09
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 7e-09
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 7e-09
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 57 1e-08
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 2e-08
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 2e-08
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 4e-08
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 7e-08
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 9e-08
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 9e-08
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 9e-08
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 54 1e-07
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 54 1e-07
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 1e-07
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 3e-07
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 4e-07
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 6e-07
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 51 8e-07
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 51 8e-07
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 9e-07
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 51 9e-07
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 1e-06
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 50 3e-06
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 8e-06
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 331 bits (849), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 159/294 (54%), Positives = 210/294 (71%), Gaps = 15/294 (5%)
Query: 14 FRPAPSVVLHHRTQLNDS-----------PFRPKDLTGLTTDLIKSYFDKGSIQEAHTLF 62
F+P P+ V R+ L ++ P++PK L T+LI SYF+KG ++EA +LF
Sbjct: 12 FKPIPNFV---RSSLRNAGVESSQNTEYPPYKPKKHHILATNLIVSYFEKGLVEEARSLF 68
Query: 63 DEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALF 122
DEM RDVVAWTAMITGY S N+++RAW+ F M++ G PN FTLS+VLK+C+ ++ L
Sbjct: 69 DEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLA 128
Query: 123 CGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITG 182
G L HG+ VK+G GS +YVDNA+M+MYATC +M+ A ++F DI KN V+WTTLITG
Sbjct: 129 YGALVHGVVVKLGMEGS-LYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITG 187
Query: 183 YTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSN 242
+TH GD GGL++++QM+LE E++P+ +IAV A AS+ S GKQ+HA+VI GFQSN
Sbjct: 188 FTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSN 247
Query: 243 LPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLDSKESLCIF 296
LPVMNSILD+YCRC SEAK +F EM KD ITWNTLI+ E DS E+L +F
Sbjct: 248 LPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDSSEALLMF 301
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 138/250 (55%), Gaps = 5/250 (2%)
Query: 54 SIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLK 113
+++ A +F ++ ++ V WT +ITG+T K++ +ML + + ++ ++
Sbjct: 162 TMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVR 221
Query: 114 ACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNA 173
A + ++ G+ H +K G + S++ V N+++D+Y C + A+ F ++ K+
Sbjct: 222 ASASIDSVTTGKQIHASVIKRGFQ-SNLPVMNSILDLYCRC-GYLSEAKHYFHEMEDKDL 279
Query: 174 VSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAA 233
++W TLI+ R D+ L +F++ + + ++F+ V+ACA++ + G+QLH
Sbjct: 280 ITWNTLISE-LERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGR 338
Query: 234 VINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT-QKDTITWNTLIAGFETLD-SKE 291
+ GF N+ + N+++DMY +C ++++ F E+ +++ ++W +++ G+ + E
Sbjct: 339 IFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAE 398
Query: 292 SLCIFSLMVS 301
++ +F MVS
Sbjct: 399 AVELFDKMVS 408
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 8/127 (6%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMT-HRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRD 99
L LI Y G+I ++ +F E+ R++V+WT+M+ GY S + + A ++F +M+
Sbjct: 350 LANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSS 409
Query: 100 GVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD 159
G+RP+ AVL AC+ G + GL K S Y N D+Y D +
Sbjct: 410 GIRPDRIVFMAVLSACR-----HAGLVEKGL--KYFNVMESEYGINPDRDIYNCVVDLLG 462
Query: 160 RARMVFE 166
RA + E
Sbjct: 463 RAGKIGE 469
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/256 (36%), Positives = 140/256 (54%), Gaps = 3/256 (1%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
L++ Y G + +A +F+EM DVV W+ MI + + A +F RM V PN
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPN 347
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
FTLS++L C + GE HGL VK+G IYV NAL+D+YA C + MD A +
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQLHGLVVKVGF-DLDIYVSNALIDVYAKC-EKMDTAVKL 405
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
F ++ +KN VSW T+I GY + G+ +FR+ + + ++ +FS A+ ACAS+ S
Sbjct: 406 FAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASM 465
Query: 225 ILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
LG Q+H I + V NS++DMY +C A+ F EM D +WN LI+G+
Sbjct: 466 DLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGY 525
Query: 285 ETLD-SKESLCIFSLM 299
T +++L I +M
Sbjct: 526 STHGLGRQALRILDIM 541
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 102/201 (50%), Gaps = 3/201 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
++ LI Y + A LF E++ ++ V+W +I GY + +A+ +F LR+
Sbjct: 385 VSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQ 444
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
V T S+ L AC L ++ G HGLA+K + V N+L+DMYA C D +
Sbjct: 445 VSVTEVTFSSALGACASLASMDLGVQVHGLAIKTN-NAKKVAVSNSLIDMYAKCGD-IKF 502
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
A+ VF ++ T + SW LI+GY+ G LR+ M + + + +F +S C++
Sbjct: 503 AQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSN 562
Query: 221 VGSGILGKQLHAAVI-NHGFQ 240
G G++ ++I +HG +
Sbjct: 563 AGLIDQGQECFESMIRDHGIE 583
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 120/244 (49%), Gaps = 8/244 (3%)
Query: 42 TTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGV 101
T L+ +Y G ++A LFDEM R+ V++ + GY +C ++ R+ R+G
Sbjct: 87 TNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGY-ACQD---PIGLYSRLHREGH 142
Query: 102 RPNAFTLSAVLKACKGL-RALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
N ++ LK L +A C L H VK+G S+ +V AL++ Y+ C S+D
Sbjct: 143 ELNPHVFTSFLKLFVSLDKAEICPWL-HSPIVKLG-YDSNAFVGAALINAYSVC-GSVDS 199
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
AR VFE I+ K+ V W +++ Y G L++ M + + ++F A+ A
Sbjct: 200 ARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIG 259
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTL 280
+G+ K +H ++ + + V +L +Y + S+A + F EM + D + W+ +
Sbjct: 260 LGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFM 319
Query: 281 IAGF 284
IA F
Sbjct: 320 IARF 323
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 149/265 (56%), Gaps = 14/265 (5%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L LI Y + +AH LFD+M R+V++WT MI+ Y+ C H +A ++ MLRD
Sbjct: 98 LVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDN 157
Query: 101 VRPNAFTLSAVLKACKGL---RALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDS 157
VRPN +T S+VL++C G+ R L CG + GL S ++V +AL+D++A +
Sbjct: 158 VRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLE-------SDVFVRSALIDVFAKLGEP 210
Query: 158 MDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSA 217
D A VF+++VT +A+ W ++I G+ + L +F++M + + + A
Sbjct: 211 ED-ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRA 269
Query: 218 CASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITW 277
C + LG Q H ++ + +L + N+++DMYC+C +A + F +M ++D ITW
Sbjct: 270 CTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITW 327
Query: 278 NTLIAGF-ETLDSKESLCIFSLMVS 301
+T+I+G + S+E+L +F M S
Sbjct: 328 STMISGLAQNGYSQEALKLFERMKS 352
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 71/163 (43%), Gaps = 10/163 (6%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L L+ Y GS+++A +F++M RDV+ W+ MI+G + A K+F RM G
Sbjct: 295 LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSG 354
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
+PN T+ VL AC L G K+ ++D+ D
Sbjct: 355 TKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDA 414
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEE 203
+++ E +AV+W TL+ G RV R MVL E
Sbjct: 415 VKLLNEMECEPDAVTWRTLL----------GACRVQRNMVLAE 447
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 158 bits (399), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 134/240 (55%), Gaps = 3/240 (1%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
+I +Y + + +A LF ++ ++W A+I+GY A+ +F M DG++PN
Sbjct: 65 MIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPN 124
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
+TL +VL+ C L L GE HG +K G + V N L+ MYA C + A +
Sbjct: 125 EYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGF-DLDVNVVNGLLAMYAQC-KRISEAEYL 182
Query: 165 FEDIV-TKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGS 223
FE + KN V+WT+++TGY+ G AF + FR + E + + ++F ++ACASV +
Sbjct: 183 FETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSA 242
Query: 224 GILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAG 283
+G Q+H ++ GF++N+ V ++++DMY +CR A+ M D ++WN++I G
Sbjct: 243 CRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVG 302
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 122/244 (50%), Gaps = 9/244 (3%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
LI Y ++ A L + M DVV+W +MI G A +F RM ++ +
Sbjct: 268 LIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKID 327
Query: 105 AFTLSAVLKACKGLR--ALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
FT+ ++L C L + AH L VK G + V+NAL+DMYA MD A
Sbjct: 328 DFTIPSILN-CFALSRTEMKIASSAHCLIVKTGYATYKL-VNNALVDMYAKR-GIMDSAL 384
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA--VSACAS 220
VFE ++ K+ +SWT L+TG TH G L++F M + G ++P A +SA A
Sbjct: 385 KVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRV--GGITPDKIVTASVLSASAE 442
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTL 280
+ G+Q+H I GF S+L V NS++ MY +C +A F M +D ITW L
Sbjct: 443 LTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCL 502
Query: 281 IAGF 284
I G+
Sbjct: 503 IVGY 506
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 83/155 (53%), Gaps = 2/155 (1%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
L+ Y +G + A +F+ M +DV++WTA++TG T + A K+F M G+ P+
Sbjct: 370 LVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPD 429
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
++VL A L L G+ HG +K G SS+ V+N+L+ MY T C S++ A ++
Sbjct: 430 KIVTASVLSASAELTLLEFGQQVHGNYIKSGF-PSSLSVNNSLVTMY-TKCGSLEDANVI 487
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQM 199
F + ++ ++WT LI GY G R F M
Sbjct: 488 FNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSM 522
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 157 bits (398), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 146/277 (52%), Gaps = 7/277 (2%)
Query: 16 PAPSVVLHHRTQLNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTA 75
P +V++ R + D RP L +T +I +Y G +++A LF EM+ DVVAW
Sbjct: 242 PEEAVLVFER--MRDEGHRPDHLAFVT--VINTYIRLGKLKDARLLFGEMSSPDVVAWNV 297
Query: 76 MITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIG 135
MI+G+ + A + F M + V+ TL +VL A + L G + H A+K+G
Sbjct: 298 MISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLG 357
Query: 136 ARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRV 195
S+IYV ++L+ MY+ C + M+ A VFE + KN V W +I GY H G++ + +
Sbjct: 358 L-ASNIYVGSSLVSMYSKC-EKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMEL 415
Query: 196 FRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCR 255
F M + F+F+ +S CA+ +G Q H+ +I NL V N+++DMY +
Sbjct: 416 FMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAK 475
Query: 256 CRCASEAKQFFCEMTQKDTITWNTLIAGFETLDSKES 292
C +A+Q F M +D +TWNT+I + D ES
Sbjct: 476 CGALEDARQIFERMCDRDNVTWNTIIGSY-VQDENES 511
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 126/259 (48%), Gaps = 2/259 (0%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
+ L+ Y ++ A +F+ + ++ V W AMI GY + ++F M G
Sbjct: 366 SSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYN 425
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
+ FT +++L C L G H + +K +++V NAL+DMYA C +++ AR
Sbjct: 426 IDDFTFTSLLSTCAASHDLEMGSQFHSIIIK-KKLAKNLFVGNALVDMYAKC-GALEDAR 483
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVG 222
+FE + ++ V+W T+I Y + +F++M L + + AC V
Sbjct: 484 QIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVH 543
Query: 223 SGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIA 282
GKQ+H + G +L +S++DMY +C +A++ F + + ++ N LIA
Sbjct: 544 GLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIA 603
Query: 283 GFETLDSKESLCIFSLMVS 301
G+ + +E++ +F M++
Sbjct: 604 GYSQNNLEEAVVLFQEMLT 622
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 129/260 (49%), Gaps = 5/260 (1%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
+ LI Y G I++A +F + VV+ A+I GY+ N+ A +F ML GV
Sbjct: 568 SSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVN 626
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
P+ T + +++AC +L G HG K G Y+ +L+ MY M A
Sbjct: 627 PSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNS-RGMTEAC 685
Query: 163 MVFEDIVT-KNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASV 221
+F ++ + K+ V WT +++G++ G L+ +++M + +F + C+ +
Sbjct: 686 ALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVL 745
Query: 222 GSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK-DTITWNTL 280
S G+ +H+ + + + N+++DMY +C + Q F EM ++ + ++WN+L
Sbjct: 746 SSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSL 805
Query: 281 IAGF-ETLDSKESLCIFSLM 299
I G+ + ++++L IF M
Sbjct: 806 INGYAKNGYAEDALKIFDSM 825
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 103/243 (42%), Gaps = 38/243 (15%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L ++ Y + A FD +DV AW +M++ Y+S + + F + +
Sbjct: 97 LGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQ 155
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
+ PN FT S VL C + G H +K+G +S Y AL+DMYA CD +
Sbjct: 156 IFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNS-YCGGALVDMYAK-CDRISD 213
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
AR VFE IV N V WT L +GY G + VF +M +EG
Sbjct: 214 ARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM-RDEGH--------------- 257
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTL 280
+ H A + ++++ Y R +A+ F EM+ D + WN +
Sbjct: 258 -------RPDHLAFV------------TVINTYIRLGKLKDARLLFGEMSSPDVVAWNVM 298
Query: 281 IAG 283
I+G
Sbjct: 299 ISG 301
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 96/183 (52%), Gaps = 8/183 (4%)
Query: 120 ALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTL 179
AL G+ H ++ +G S + NA++D+YA C + A F D + K+ +W ++
Sbjct: 75 ALRIGKAVHSKSLILGI-DSEGRLGNAIVDLYAKCA-QVSYAEKQF-DFLEKDVTAWNSM 131
Query: 180 ITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAVSACASVGSGILGKQLHAAVINH 237
++ Y+ G LR F + L E ++ P F+FSI +S CA + G+Q+H ++I
Sbjct: 132 LSMYSSIGKPGKVLRSF--VSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKM 189
Query: 238 GFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLD-SKESLCIF 296
G + N +++DMY +C S+A++ F + +T+ W L +G+ +E++ +F
Sbjct: 190 GLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVF 249
Query: 297 SLM 299
M
Sbjct: 250 ERM 252
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 84/201 (41%), Gaps = 39/201 (19%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTH-RDVVAWTAMITGYTSCNHHSRAWKVFPRMLRD 99
L L+ Y + + EA LF E++ + +V WT M++G++ + A K + M D
Sbjct: 667 LGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHD 726
Query: 100 GVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD 159
GV P+ T VL+ C L +L G H L + A N L+DMYA C D M
Sbjct: 727 GVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHL-AHDLDELTSNTLIDMYAKCGD-MK 784
Query: 160 RARMVFEDIVTK-NAVSWTTLITGY----------------------------------- 183
+ VF+++ + N VSW +LI GY
Sbjct: 785 GSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTAC 844
Query: 184 THRGDAFGGLRVFRQMVLEEG 204
+H G G ++F M+ + G
Sbjct: 845 SHAGKVSDGRKIFEMMIGQYG 865
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 12/163 (7%)
Query: 37 DLTGLTTD-LIKSYFDKGSIQEAHTLFDEMTHR-DVVAWTAMITGYTSCNHHSRAWKVFP 94
DL LT++ LI Y G ++ + +FDEM R +VV+W ++I GY + A K+F
Sbjct: 764 DLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFD 823
Query: 95 RMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHG---LAVKIGARGSSIYVDNA--LMD 149
M + + P+ T VL AC G+++ G + IG G VD+ ++D
Sbjct: 824 SMRQSHIMPDEITFLGVLTACS-----HAGKVSDGRKIFEMMIGQYGIEARVDHVACMVD 878
Query: 150 MYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGG 192
+ + + + +A W++L+ GD G
Sbjct: 879 LLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRG 921
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 157 bits (398), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 144/253 (56%), Gaps = 7/253 (2%)
Query: 32 PFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDV--VAWTAMITGYTSCNHHSRA 89
P+ ++ G+++ L++ Y G + AH +FD M+ RD AW ++I+GY + A
Sbjct: 120 PYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDA 179
Query: 90 WKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMD 149
++ +M DGV+P+ FT VLKAC G+ ++ GE H VK G G +YV NAL+
Sbjct: 180 MALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGF-GYDVYVLNALVV 238
Query: 150 MYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPF 209
MYA C D + +AR VF+ I K+ VSW +++TGY H G L +FR MV + + P
Sbjct: 239 MYAKCGDIV-KARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMV--QNGIEPD 295
Query: 210 SFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM 269
+I+ S A V S G+QLH VI G + L V N+++ +Y + +A F +M
Sbjct: 296 KVAIS-SVLARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQM 354
Query: 270 TQKDTITWNTLIA 282
++DT++WN +I+
Sbjct: 355 LERDTVSWNAIIS 367
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 108/203 (53%), Gaps = 7/203 (3%)
Query: 102 RPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRA 161
P F +++L+ C LRA+ G H L R +++ + + L+ +YA+C + + A
Sbjct: 91 EPEIF--ASLLETCYSLRAIDHGVRVHHLIPPYLLR-NNLGISSKLVRLYASCGYA-EVA 146
Query: 162 RMVFEDIVTKNA--VSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACA 219
VF+ + +++ +W +LI+GY G + ++ QM + + F+F + AC
Sbjct: 147 HEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACG 206
Query: 220 SVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNT 279
+GS +G+ +H ++ GF ++ V+N+++ MY +C +A+ F + KD ++WN+
Sbjct: 207 GIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNS 266
Query: 280 LIAGFETLD-SKESLCIFSLMVS 301
++ G+ E+L IF LMV
Sbjct: 267 MLTGYLHHGLLHEALDIFRLMVQ 289
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 107/225 (47%), Gaps = 9/225 (4%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
L+ Y G I +A +FD + H+D V+W +M+TGY A +F M+++G+ P+
Sbjct: 236 LVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPD 295
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
+S+VL + G HG ++ G + V NAL+ +Y+ + +A +
Sbjct: 296 KVAISSVLARVLSFKH---GRQLHGWVIRRGMEWE-LSVANALIVLYSKR-GQLGQACFI 350
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
F+ ++ ++ VSW +I+ ++ + GL+ F QM + +F +S CA+ G
Sbjct: 351 FDQMLERDTVSWNAIISAHSKNSN---GLKYFEQMHRANAKPDGITFVSVLSLCANTGMV 407
Query: 225 ILGKQLHAAV-INHGFQSNLPVMNSILDMYCRCRCASEAKQFFCE 268
G++L + + +G + ++++Y R EA +
Sbjct: 408 EDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQ 452
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 144/258 (55%), Gaps = 6/258 (2%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
L+ Y G + A +F EM+ R VV++T+MI GY A K+F M +G+ P+
Sbjct: 337 LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPD 396
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
+T++AVL C R L G+ H +K G I+V NALMDMYA C SM A +V
Sbjct: 397 VYTVTAVLNCCARYRLLDEGKRVHEW-IKENDLGFDIFVSNALMDMYAK-CGSMQEAELV 454
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA--VSACASVG 222
F ++ K+ +SW T+I GY+ A L +F ++LEE SP ++A + ACAS+
Sbjct: 455 FSEMRVKDIISWNTIIGGYSKNCYANEALSLF-NLLLEEKRFSPDERTVACVLPACASLS 513
Query: 223 SGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIA 282
+ G+++H ++ +G+ S+ V NS++DMY +C A F ++ KD ++W +IA
Sbjct: 514 AFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIA 573
Query: 283 GFETLD-SKESLCIFSLM 299
G+ KE++ +F+ M
Sbjct: 574 GYGMHGFGKEAIALFNQM 591
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 123/246 (50%), Gaps = 2/246 (0%)
Query: 39 TGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLR 98
+ L + L Y + G ++EA +FDE+ + W ++ S + +F +M+
Sbjct: 129 SNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMS 188
Query: 99 DGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSM 158
GV +++T S V K+ LR++ GE HG +K G G V N+L+ Y +
Sbjct: 189 SGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGF-GERNSVGNSLVAFYLKN-QRV 246
Query: 159 DRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSAC 218
D AR VF+++ ++ +SW ++I GY G A GL VF QM++ E+ + + C
Sbjct: 247 DSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGC 306
Query: 219 ASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWN 278
A LG+ +H+ + F N++LDMY +C AK F EM+ + +++
Sbjct: 307 ADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYT 366
Query: 279 TLIAGF 284
++IAG+
Sbjct: 367 SMIAGY 372
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 119/247 (48%), Gaps = 7/247 (2%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
++ L+ Y GS+QEA +F EM +D+++W +I GY+ + + A +F +L +
Sbjct: 434 VSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEK 493
Query: 101 -VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD 159
P+ T++ VL AC L A G HG ++ G S +V N+L+DMYA C ++
Sbjct: 494 RFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYF-SDRHVANSLVDMYAKC-GALL 551
Query: 160 RARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACA 219
A M+F+DI +K+ VSWT +I GY G + +F QM E SF + AC+
Sbjct: 552 LAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACS 611
Query: 220 SVGSGILGKQLHAAVINH--GFQSNLPVMNSILDMYCRCRCASEAKQFFCEM-TQKDTIT 276
G G + ++ H + + I+DM R +A +F M D
Sbjct: 612 HSGLVDEGWRFF-NIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATI 670
Query: 277 WNTLIAG 283
W L+ G
Sbjct: 671 WGALLCG 677
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 98/201 (48%), Gaps = 19/201 (9%)
Query: 87 SRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNA 146
S W + PR TL +VL+ C ++L G V RG+ +D+
Sbjct: 87 SGKWDIDPR-----------TLCSVLQLCADSKSL-----KDGKEVDNFIRGNGFVIDSN 130
Query: 147 L---MDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEE 203
L + + T C + A VF+++ + A+ W L+ GD G + +F++M+
Sbjct: 131 LGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSG 190
Query: 204 GELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAK 263
E+ ++FS + +S+ S G+QLH ++ GF V NS++ Y + + A+
Sbjct: 191 VEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSAR 250
Query: 264 QFFCEMTQKDTITWNTLIAGF 284
+ F EMT++D I+WN++I G+
Sbjct: 251 KVFDEMTERDVISWNSIINGY 271
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/254 (35%), Positives = 142/254 (55%), Gaps = 4/254 (1%)
Query: 31 SPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAW 90
S FR + G T L+ Y GS++EA +F++M RD V WT +I+GY+ + A
Sbjct: 89 SIFRHDIVMGNT--LLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDAL 146
Query: 91 KVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDM 150
F +MLR G PN FTLS+V+KA R CG HG VK G S+++V +AL+D+
Sbjct: 147 LFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGF-DSNVHVGSALLDL 205
Query: 151 YATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFS 210
Y T MD A++VF+ + ++N VSW LI G+ R L +F+ M+ + S FS
Sbjct: 206 Y-TRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFS 264
Query: 211 FSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT 270
++ AC+S G GK +HA +I G + N++LDMY + +A++ F +
Sbjct: 265 YASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA 324
Query: 271 QKDTITWNTLIAGF 284
++D ++WN+L+ +
Sbjct: 325 KRDVVSWNSLLTAY 338
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 93/175 (53%), Gaps = 2/175 (1%)
Query: 109 SAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDI 168
+ +LK C + L G + H ++ R I + N L++MYA C S++ AR VFE +
Sbjct: 64 NTLLKKCTVFKLLIQGRIVHAHILQSIFR-HDIVMGNTLLNMYAKC-GSLEEARKVFEKM 121
Query: 169 VTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGK 228
++ V+WTTLI+GY+ L F QM+ + F+ S + A A+ G G
Sbjct: 122 PQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGH 181
Query: 229 QLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAG 283
QLH + GF SN+ V +++LD+Y R +A+ F + ++ ++WN LIAG
Sbjct: 182 QLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAG 236
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 112/238 (47%), Gaps = 3/238 (1%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
L+ Y G + +A +FD + R+ V+W A+I G+ + +A ++F MLRDG RP+
Sbjct: 202 LLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPS 261
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
F+ +++ AC L G+ H +K G + + + N L+DMYA S+ AR +
Sbjct: 262 HFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVA-FAGNTLLDMYAKS-GSIHDARKI 319
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
F+ + ++ VSW +L+T Y G + F +M + SF ++AC+ G
Sbjct: 320 FDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLL 379
Query: 225 ILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTIT-WNTLI 281
G + + G +++D+ R + A +F EM + T W L+
Sbjct: 380 DEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 211 FSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT 270
++ + C I G+ +HA ++ F+ ++ + N++L+MY +C EA++ F +M
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 271 QKDTITWNTLIAGFETLDSK-ESLCIFSLMV 300
Q+D +TW TLI+G+ D ++L F+ M+
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQML 153
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 154 bits (389), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 147/307 (47%), Gaps = 39/307 (12%)
Query: 31 SPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAW 90
SPF G + L+ Y G++ +A +FDEM R+VV+W ++IT + A
Sbjct: 181 SPFLSDVYIG--SALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEAL 238
Query: 91 KVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDM 150
VF ML V P+ TL++V+ AC L A+ G+ HG VK + I + NA +DM
Sbjct: 239 DVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDM 298
Query: 151 YATCC---------DSM---------------------DRARMVFEDIVTKNAVSWTTLI 180
YA C DSM AR++F + +N VSW LI
Sbjct: 299 YAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALI 358
Query: 181 TGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGF- 239
GYT G+ L +F + E + +SF+ + ACA + LG Q H V+ HGF
Sbjct: 359 AGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFK 418
Query: 240 -----QSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF-ETLDSKESL 293
+ ++ V NS++DMY +C C E F +M ++D ++WN +I GF + E+L
Sbjct: 419 FQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEAL 478
Query: 294 CIFSLMV 300
+F M+
Sbjct: 479 ELFREML 485
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 141/280 (50%), Gaps = 35/280 (12%)
Query: 53 GSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVL 112
G + EA +LF M RD W +M++G+ + A F M ++G N ++ ++VL
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 113 KACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKN 172
AC GL + G H L K S +Y+ +AL+DMY+ C + D R VF+++ +N
Sbjct: 160 SACSGLNDMNKGVQVHSLIAK-SPFLSDVYIGSALVDMYSKCGNVNDAQR-VFDEMGDRN 217
Query: 173 AVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHA 232
VSW +LIT + G A L VF+ M+ E + + +SACAS+ + +G+++H
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHG 277
Query: 233 AVI-NHGFQSNLPVMNSILDMYCRCRCASE------------------------------ 261
V+ N ++++ + N+ +DMY +C E
Sbjct: 278 RVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTK 337
Query: 262 -AKQFFCEMTQKDTITWNTLIAGF-ETLDSKESLCIFSLM 299
A+ F +M +++ ++WN LIAG+ + +++E+L +F L+
Sbjct: 338 AARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLL 377
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 120/249 (48%), Gaps = 10/249 (4%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
T +I Y S + A +F +M R+VV+W A+I GYT + A +F + R+ V
Sbjct: 324 TSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVC 383
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSS-----IYVDNALMDMYATCCDS 157
P ++ + +LKAC L L G AH +K G + S I+V N+L+DMY C
Sbjct: 384 PTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVK-CGC 442
Query: 158 MDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAV-S 216
++ +VF ++ ++ VSW +I G+ G L +FR+M LE GE I V S
Sbjct: 443 VEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREM-LESGEKPDHITMIGVLS 501
Query: 217 ACASVGSGILGKQLHAAVI-NHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM-TQKDT 274
AC G G+ +++ + G ++D+ R EAK EM Q D+
Sbjct: 502 ACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDS 561
Query: 275 ITWNTLIAG 283
+ W +L+A
Sbjct: 562 VIWGSLLAA 570
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 113/230 (49%), Gaps = 37/230 (16%)
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
P A L + +K+ L A++ H +K G + I++ N L+D Y+ C S++ R
Sbjct: 21 PFAKLLDSCIKS--KLSAIYV-RYVHASVIKSGF-SNEIFIQNRLIDAYSKC-GSLEDGR 75
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQM----------------------- 199
VF+ + +N +W +++TG T G +FR M
Sbjct: 76 QVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEE 135
Query: 200 -------VLEEG-ELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILD 251
+ +EG L+ +SF+ +SAC+ + G Q+H+ + F S++ + ++++D
Sbjct: 136 ALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVD 195
Query: 252 MYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFE-TLDSKESLCIFSLMV 300
MY +C ++A++ F EM ++ ++WN+LI FE + E+L +F +M+
Sbjct: 196 MYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMML 245
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 207 SPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFF 266
SPF+ + S S S I + +HA+VI GF + + + N ++D Y +C + +Q F
Sbjct: 20 SPFA-KLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVF 78
Query: 267 CEMTQKDTITWNTLIAGFET---LDSKESL 293
+M Q++ TWN+++ G LD +SL
Sbjct: 79 DKMPQRNIYTWNSVVTGLTKLGFLDEADSL 108
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 139/244 (56%), Gaps = 6/244 (2%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
T L+ Y G + +AH LFDE+ R VV WTA+ +GYT+ H A +F +M+ GV+
Sbjct: 150 TSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVK 209
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
P+++ + VL AC + L GE ++ + +S +V L+++YA C M++AR
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNS-FVRTTLVNLYAKC-GKMEKAR 267
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA--VSACAS 220
VF+ +V K+ V+W+T+I GY G+ +F QM+ E L P FSI +S+CAS
Sbjct: 268 SVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQE--NLKPDQFSIVGFLSSCAS 325
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTL 280
+G+ LG+ + + H F +NL + N+++DMY +C + + F EM +KD + N
Sbjct: 326 LGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAA 385
Query: 281 IAGF 284
I+G
Sbjct: 386 ISGL 389
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 121/245 (49%), Gaps = 8/245 (3%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
T L+ Y G +++A ++FD M +D+V W+ MI GY S + ++F +ML++ ++
Sbjct: 251 TTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLK 310
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
P+ F++ L +C L AL GE L + +++++ NAL+DMYA C +M R
Sbjct: 311 PDQFSIVGFLSSCASLGALDLGEWGISL-IDRHEFLTNLFMANALIDMYAKC-GAMARGF 368
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVG 222
VF+++ K+ V I+G G VF Q E+ +SP + C V
Sbjct: 369 EVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQT--EKLGISPDGSTFLGLLCGCVH 426
Query: 223 SGILGKQL---HAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK-DTITWN 278
+G++ L +A + + + ++D++ R +A + C+M + + I W
Sbjct: 427 AGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWG 486
Query: 279 TLIAG 283
L++G
Sbjct: 487 ALLSG 491
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 121/247 (48%), Gaps = 7/247 (2%)
Query: 58 AHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKG 117
++ LF ++ + ++I G+ + + +F + + G+ + FT VLKAC
Sbjct: 64 SYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTR 123
Query: 118 LRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWT 177
+ G H L VK G + +L+ +Y+ ++ A +F++I ++ V+WT
Sbjct: 124 ASSRKLGIDLHSLVVKCGFN-HDVAAMTSLLSIYSGS-GRLNDAHKLFDEIPDRSVVTWT 181
Query: 178 TLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA--VSACASVGSGILGKQLHAAVI 235
L +GYT G + +F++MV E + P S+ I +SAC VG G+ + +
Sbjct: 182 ALFSGYTTSGRHREAIDLFKKMV--EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYME 239
Query: 236 NHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLD-SKESLC 294
Q N V +++++Y +C +A+ F M +KD +TW+T+I G+ + KE +
Sbjct: 240 EMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIE 299
Query: 295 IFSLMVS 301
+F M+
Sbjct: 300 LFLQMLQ 306
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 148/265 (55%), Gaps = 10/265 (3%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L T L+ Y G I A +F+E +H D+V WTAMI GYT + A +F +M
Sbjct: 279 LVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVE 338
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
++PN T+++VL C + L G HGL++K+G ++ V NAL+ MYA C + D
Sbjct: 339 IKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTN--VANALVHMYAKCYQNRD- 395
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA--VSAC 218
A+ VFE K+ V+W ++I+G++ G L +F +M E ++P ++A SAC
Sbjct: 396 AKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSE--SVTPNGVTVASLFSAC 453
Query: 219 ASVGSGILGKQLHAAVINHGF--QSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTIT 276
AS+GS +G LHA + GF S++ V ++LD Y +C A+ F + +K+TIT
Sbjct: 454 ASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTIT 513
Query: 277 WNTLIAGF-ETLDSKESLCIFSLMV 300
W+ +I G+ + D+ SL +F M+
Sbjct: 514 WSAMIGGYGKQGDTIGSLELFEEML 538
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 138/262 (52%), Gaps = 8/262 (3%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
T L+ Y G I+ AH +F+++T R+VV WT+MI GY + +F RM + V
Sbjct: 180 TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVL 239
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
N +T ++ AC L AL G+ HG VK G SS V +L+DMY C D + AR
Sbjct: 240 GNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLV-TSLLDMYVKCGD-ISNAR 297
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA--VSACAS 220
VF + + V WT +I GYTH G L +F++M + E+ P +IA +S C
Sbjct: 298 RVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKM--KGVEIKPNCVTIASVLSGCGL 355
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTL 280
+ + LG+ +H I G + V N+++ MY +C +AK F ++KD + WN++
Sbjct: 356 IENLELGRSVHGLSIKVGIW-DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSI 414
Query: 281 IAGFETLDS-KESLCIFSLMVS 301
I+GF S E+L +F M S
Sbjct: 415 ISGFSQNGSIHEALFLFHRMNS 436
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 122/228 (53%), Gaps = 6/228 (2%)
Query: 39 TGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLR 98
T + L+ Y ++A +F+ + +D+VAW ++I+G++ A +F RM
Sbjct: 377 TNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNS 436
Query: 99 DGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIG-ARGSSIYVDNALMDMYATCCDS 157
+ V PN T++++ AC L +L G H +VK+G SS++V AL+D YA C D
Sbjct: 437 ESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDP 496
Query: 158 MDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSA 217
AR++F+ I KN ++W+ +I GY +GD G L +F +M+ ++ + + +F+ +SA
Sbjct: 497 -QSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSA 555
Query: 218 CASVGSGILGKQLHAAVI-NHGFQSNLPVMNSILDMYCRCRCASEAKQ 264
C G GK+ +++ ++ F + ++DM R A E +Q
Sbjct: 556 CGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLAR---AGELEQ 600
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 123/260 (47%), Gaps = 4/260 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ T L+ Y G ++A +FD++ D W M+ Y K++ +++ G
Sbjct: 78 IATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHG 137
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
R + S LKAC L+ L G+ H VK+ + + + L+DMYA C + +
Sbjct: 138 FRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLT--GLLDMYAKCGE-IKS 194
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
A VF DI +N V WT++I GY GL +F +M + +++ + AC
Sbjct: 195 AHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTK 254
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTL 280
+ + GK H ++ G + + ++ S+LDMY +C S A++ F E + D + W +
Sbjct: 255 LSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAM 314
Query: 281 IAGFETLDS-KESLCIFSLM 299
I G+ S E+L +F M
Sbjct: 315 IVGYTHNGSVNEALSLFQKM 334
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 139/260 (53%), Gaps = 11/260 (4%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
LI Y G + A LFDE+T RD V+W +MI+GY+ + A +F +M +G P+
Sbjct: 173 LIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPD 232
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAV--KIGARGSSIYVDNALMDMYATCCDSMDRAR 162
TL ++L AC L L G L +A+ KIG S ++ + L+ MY C D +D AR
Sbjct: 233 ERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGL---STFLGSKLISMYGKCGD-LDSAR 288
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAVSACAS 220
VF ++ K+ V+WT +IT Y+ G + ++F +M E+ +SP + S +SAC S
Sbjct: 289 RVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEM--EKTGVSPDAGTLSTVLSACGS 346
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTL 280
VG+ LGKQ+ Q N+ V ++DMY +C EA + F M K+ TWN +
Sbjct: 347 VGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAM 406
Query: 281 IAGF-ETLDSKESLCIFSLM 299
I + +KE+L +F M
Sbjct: 407 ITAYAHQGHAKEALLLFDRM 426
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 113/228 (49%), Gaps = 6/228 (2%)
Query: 39 TGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLR 98
T L + LI Y G + A +F++M +D VAWTAMIT Y+ S A+K+F M +
Sbjct: 268 TFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEK 327
Query: 99 DGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSM 158
GV P+A TLS VL AC + AL G+ A ++ + +IYV L+DMY C +
Sbjct: 328 TGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQ-HNIYVATGLVDMYGK-CGRV 385
Query: 159 DRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSAC 218
+ A VFE + KN +W +IT Y H+G A L +F +M + S +F +SAC
Sbjct: 386 EEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMSVPP---SDITFIGVLSAC 442
Query: 219 ASVGSGILG-KQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQF 265
G G + H G + +I+D+ R EA +F
Sbjct: 443 VHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEF 490
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 122/254 (48%), Gaps = 4/254 (1%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSC-NHHSRAWKVFPRMLRDGVRP 103
LI + G + LF + ++ MI G T+ N H A ++ RM G++P
Sbjct: 71 LIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKP 130
Query: 104 NAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARM 163
+ FT + V AC L + G H K+G ++++++L+ MYA C + AR
Sbjct: 131 DKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLE-RDVHINHSLIMMYAKC-GQVGYARK 188
Query: 164 VFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGS 223
+F++I ++ VSW ++I+GY+ G A + +FR+M E E + + AC+ +G
Sbjct: 189 LFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGD 248
Query: 224 GILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAG 283
G+ L I + + + ++ MY +C A++ F +M +KD + W +I
Sbjct: 249 LRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITV 308
Query: 284 F-ETLDSKESLCIF 296
+ + S E+ +F
Sbjct: 309 YSQNGKSSEAFKLF 322
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 75/130 (57%), Gaps = 2/130 (1%)
Query: 172 NAVSWTTLITGYTHR-GDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQL 230
N S+ +I G T+ D L ++R+M + F+++ ACA + +G+ +
Sbjct: 95 NHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSV 154
Query: 231 HAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF-ETLDS 289
H+++ G + ++ + +S++ MY +C A++ F E+T++DT++WN++I+G+ E +
Sbjct: 155 HSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYA 214
Query: 290 KESLCIFSLM 299
K+++ +F M
Sbjct: 215 KDAMDLFRKM 224
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 134/244 (54%), Gaps = 4/244 (1%)
Query: 46 IKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFP--RMLRDGVRP 103
++S + G+++ A +FD+M H D+V+WT++I Y + N+ A +F R++ V P
Sbjct: 47 LRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSP 106
Query: 104 NAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARM 163
+ LS VLKAC + GE H AVK SS+YV ++L+DMY +D++
Sbjct: 107 DTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLL-SSVYVGSSLLDMYKRV-GKIDKSCR 164
Query: 164 VFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGS 223
VF ++ +NAV+WT +ITG H G GL F +M E ++F+IA+ ACA +
Sbjct: 165 VFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQ 224
Query: 224 GILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAG 283
GK +H VI GF + L V NS+ MY C + F M+++D ++W +LI
Sbjct: 225 VKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVA 284
Query: 284 FETL 287
++ +
Sbjct: 285 YKRI 288
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 134/261 (51%), Gaps = 11/261 (4%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ L Y + G +Q+ LF+ M+ RDVV+WT++I Y +A + F +M
Sbjct: 246 VANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQ 305
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
V PN T +++ AC L L GE H + +G S+ V N++M MY+TC ++
Sbjct: 306 VPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGL-NDSLSVSNSMMKMYSTC-GNLVS 363
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA----VS 216
A ++F+ + ++ +SW+T+I GY G G + F M + P F++A VS
Sbjct: 364 ASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWM--RQSGTKPTDFALASLLSVS 421
Query: 217 ACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTIT 276
+V G G+Q+HA + G + N V +S+++MY +C EA F E + D ++
Sbjct: 422 GNMAVIEG--GRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVS 479
Query: 277 WNTLIAGF-ETLDSKESLCIF 296
+I G+ E SKE++ +F
Sbjct: 480 LTAMINGYAEHGKSKEAIDLF 500
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 121/244 (49%), Gaps = 6/244 (2%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
+ L+ Y G I ++ +F EM R+ V WTA+ITG + F M R
Sbjct: 147 SSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEEL 206
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARG--SSIYVDNALMDMYATCCDSMDR 160
+ +T + LKAC GLR + G+ H + RG +++ V N+L MY T C M
Sbjct: 207 SDTYTFAIALKACAGLRQVKYGKAIH---THVIVRGFVTTLCVANSLATMY-TECGEMQD 262
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
+FE++ ++ VSWT+LI Y G + F +M + + +F+ SACAS
Sbjct: 263 GLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACAS 322
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTL 280
+ + G+QLH V++ G +L V NS++ MY C A F M +D I+W+T+
Sbjct: 323 LSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTI 382
Query: 281 IAGF 284
I G+
Sbjct: 383 IGGY 386
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 115/247 (46%), Gaps = 4/247 (1%)
Query: 37 DLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRM 96
D ++ ++K Y G++ A LF M RD+++W+ +I GY +K F M
Sbjct: 343 DSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWM 402
Query: 97 LRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCD 156
+ G +P F L+++L + + G H LA+ G +S V ++L++MY+ C
Sbjct: 403 RQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNST-VRSSLINMYSK-CG 460
Query: 157 SMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVS 216
S+ A M+F + + VS T +I GY G + + +F + + +F ++
Sbjct: 461 SIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLT 520
Query: 217 ACASVGSGILG-KQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT-QKDT 274
AC G LG + + + ++D+ CR S+A++ EM+ +KD
Sbjct: 521 ACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDD 580
Query: 275 ITWNTLI 281
+ W TL+
Sbjct: 581 VVWTTLL 587
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 73/166 (43%), Gaps = 4/166 (2%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
+ LI Y GSI+EA +F E D+V+ TAMI GY A +F + L+ G R
Sbjct: 450 SSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFR 509
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
P++ T +VL AC L G + + + ++D+ D +
Sbjct: 510 PDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEK 569
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP 208
M+ E K+ V WTTL+ +GD G R +++ EL P
Sbjct: 570 MINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERIL----ELDP 611
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 160/346 (46%), Gaps = 73/346 (21%)
Query: 22 LHHRTQLNDSPFRPKDLTGLTTD-LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGY 80
LH R ++ P R T + + ++ +Y +G + FD++ RD V+WT MI GY
Sbjct: 66 LHARKLFDEMPLR----TAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGY 121
Query: 81 TSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSS 140
+ + +A +V M+++G+ P FTL+ VL + R + G+ H VK+G RG +
Sbjct: 122 KNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRG-N 180
Query: 141 IYVDNALMDMYATCCD------------------------------SMDRARMVFEDIVT 170
+ V N+L++MYA C D MD A FE +
Sbjct: 181 VSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAE 240
Query: 171 KNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA--VSACASVGSGILGK 228
++ V+W ++I+G+ RG L +F +M L + LSP F++A +SACA++ +GK
Sbjct: 241 RDIVTWNSMISGFNQRGYDLRALDIFSKM-LRDSLLSPDRFTLASVLSACANLEKLCIGK 299
Query: 229 QLHAAVINHGFQSNLPVMNSILDMYCRCRCA----------------------------- 259
Q+H+ ++ GF + V+N+++ MY RC
Sbjct: 300 QIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIK 359
Query: 260 ----SEAKQFFCEMTQKDTITWNTLIAGFETLDS-KESLCIFSLMV 300
++AK F + +D + W +I G+E S E++ +F MV
Sbjct: 360 LGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMV 405
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 121/254 (47%), Gaps = 25/254 (9%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
T L+ Y G + +A +F + RDVVAWTAMI GY + A +F M+ G R
Sbjct: 351 TALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQR 410
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
PN++TL+A+L L +L G+ HG AVK G S+ V NAL+ MYA + +R
Sbjct: 411 PNSYTLAAMLSVASSLASLSHGKQIHGSAVKSG-EIYSVSVSNALITMYAKAGNITSASR 469
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVG 222
++ VSWT++I G A L +F M++E ++ SAC
Sbjct: 470 AFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACT--- 526
Query: 223 SGILGKQLHAAVINHGFQ---------SNLPVMNS---ILDMYCRCRCASEAKQFFCEM- 269
HA ++N G Q +P ++ ++D++ R EA++F +M
Sbjct: 527 --------HAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMP 578
Query: 270 TQKDTITWNTLIAG 283
+ D +TW +L++
Sbjct: 579 IEPDVVTWGSLLSA 592
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/250 (36%), Positives = 134/250 (53%), Gaps = 13/250 (5%)
Query: 36 KDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPR 95
+D+ T +I Y G I EA LFDE +DV WTAM++GY A ++F +
Sbjct: 248 RDVVSWNT-IITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDK 306
Query: 96 M-LRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATC 154
M R+ V NA V +G R E+A L + R S + N ++ YA C
Sbjct: 307 MPERNEVSWNAMLAGYV----QGERM----EMAKELFDVMPCRNVSTW--NTMITGYAQC 356
Query: 155 CDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA 214
+ A+ +F+ + ++ VSW +I GY+ G +F LR+F QM E G L+ SFS A
Sbjct: 357 -GKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSA 415
Query: 215 VSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDT 274
+S CA V + LGKQLH ++ G+++ V N++L MYC+C EA F EM KD
Sbjct: 416 LSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDI 475
Query: 275 ITWNTLIAGF 284
++WNT+IAG+
Sbjct: 476 VSWNTMIAGY 485
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 116/240 (48%), Gaps = 4/240 (1%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
+I Y G I EA LFD+M RD V+W AMI GY+ H A ++F +M R+G R N
Sbjct: 349 MITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLN 408
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
+ S+ L C + AL G+ HG VK G + +V NAL+ MY C S++ A +
Sbjct: 409 RSSFSSALSTCADVVALELGKQLHGRLVK-GGYETGCFVGNALLLMYCKC-GSIEEANDL 466
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
F+++ K+ VSW T+I GY+ G LR F M E + + +SAC+ G
Sbjct: 467 FKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLV 526
Query: 225 ILGKQ-LHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT-QKDTITWNTLIA 282
G+Q + ++G N ++D+ R +A M + D W TL+
Sbjct: 527 DKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLG 586
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 123/302 (40%), Gaps = 49/302 (16%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRM-LRDGVRP 103
+I Y G + A LFDEM RD+V+W MI GY + +A ++F M RD
Sbjct: 101 MISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSW 160
Query: 104 NAFTLSAVLKAC-KGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD--- 159
N C R++F + V A S+ YV N+ M+ S +
Sbjct: 161 NTMLSGYAQNGCVDDARSVF-DRMPEKNDVSWNALLSA-YVQNSKMEEACMLFKSRENWA 218
Query: 160 ------------------RARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVF----- 196
AR F+ + ++ VSW T+ITGY G ++F
Sbjct: 219 LVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPV 278
Query: 197 ---------------RQMVLEEGEL-SPFSFSIAVSACASVGSGILGKQLHAA--VINHG 238
+MV E EL VS A + + G+++ A + +
Sbjct: 279 QDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVM 338
Query: 239 FQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF-ETLDSKESLCIFS 297
N+ N+++ Y +C SEAK F +M ++D ++W +IAG+ ++ S E+L +F
Sbjct: 339 PCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFV 398
Query: 298 LM 299
M
Sbjct: 399 QM 400
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 147 bits (372), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 94/268 (35%), Positives = 146/268 (54%), Gaps = 8/268 (2%)
Query: 37 DLTG---LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVF 93
DL G L LI +Y G ++ A +FD M R +V+W MI YT S A +F
Sbjct: 91 DLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIF 150
Query: 94 PRMLRDGVRPNAFTLSAVLKACK-GLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYA 152
M +G + + FT+S+VL AC AL C +L H L+VK ++YV AL+D+YA
Sbjct: 151 LEMRNEGFKFSEFTISSVLSACGVNCDALECKKL-HCLSVKTCI-DLNLYVGTALLDLYA 208
Query: 153 TCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFS 212
C D A VFE + K++V+W++++ GY + L ++R+ E + F+ S
Sbjct: 209 KCGMIKD-AVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLS 267
Query: 213 IAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK 272
+ AC+++ + I GKQ+HA + GF SN+ V +S +DMY +C E+ F E+ +K
Sbjct: 268 SVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEK 327
Query: 273 DTITWNTLIAGF-ETLDSKESLCIFSLM 299
+ WNT+I+GF + KE + +F M
Sbjct: 328 NLELWNTIISGFAKHARPKEVMILFEKM 355
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 120/242 (49%), Gaps = 4/242 (1%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
T L+ Y G I++A +F+ M + V W++M+ GY ++ A ++ R R +
Sbjct: 201 TALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLE 260
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
N FTLS+V+ AC L AL G+ H + K G GS+++V ++ +DMYA C S+ +
Sbjct: 261 QNQFTLSSVICACSNLAALIEGKQMHAVICKSGF-GSNVFVASSAVDMYAKC-GSLRESY 318
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVG 222
++F ++ KN W T+I+G+ + +F +M + + +FS +S C G
Sbjct: 319 IIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTG 378
Query: 223 SGILGKQLHAAV-INHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTIT-WNTL 280
G++ + +G N+ + ++D+ R SEA + + T + W +L
Sbjct: 379 LVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSL 438
Query: 281 IA 282
+A
Sbjct: 439 LA 440
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 140/260 (53%), Gaps = 6/260 (2%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L LI SY G + AH LF+ M ++++++WT +++GY H A ++F M + G
Sbjct: 286 LMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFG 345
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
++P+ + S++L +C L AL G H +K G+ YV N+L+DMYA CD +
Sbjct: 346 LKPDMYACSSILTSCASLHALGFGTQVHAYTIKANL-GNDSYVTNSLIDMYAK-CDCLTD 403
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAF---GGLRVFRQMVLEEGELSPFSFSIAVSA 217
AR VF+ + V + +I GY+ G + L +FR M S +F + A
Sbjct: 404 ARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA 463
Query: 218 CASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITW 277
AS+ S L KQ+H + +G ++ ++++D+Y C C +++ F EM KD + W
Sbjct: 464 SASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIW 523
Query: 278 NTLIAGF-ETLDSKESLCIF 296
N++ AG+ + +++E+L +F
Sbjct: 524 NSMFAGYVQQSENEEALNLF 543
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 143/270 (52%), Gaps = 16/270 (5%)
Query: 39 TGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHS------RAWKV 92
T L+ LI Y G + A +F++M R++V+W+ M++ +CNHH +
Sbjct: 79 TYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVS---ACNHHGIYEESLVVFLE 135
Query: 93 FPRMLRDGVRPNAFTLSAVLKACKGL--RALFCGELAHGLAVKIGARGSSIYVDNALMDM 150
F R +D PN + LS+ ++AC GL R + VK G +YV L+D
Sbjct: 136 FWRTRKDS--PNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGF-DRDVYVGTLLIDF 192
Query: 151 YATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFS 210
Y ++D AR+VF+ + K+ V+WTT+I+G G ++ L++F Q++ + +
Sbjct: 193 YLK-DGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYI 251
Query: 211 FSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT 270
S +SAC+ + GKQ+HA ++ +G + + +MN ++D Y +C A + F M
Sbjct: 252 LSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP 311
Query: 271 QKDTITWNTLIAGF-ETLDSKESLCIFSLM 299
K+ I+W TL++G+ + KE++ +F+ M
Sbjct: 312 NKNIISWTTLLSGYKQNALHKEAMELFTSM 341
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 131/263 (49%), Gaps = 10/263 (3%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
T LI Y G+I A +FD + + V WT MI+G + ++F +++ D V
Sbjct: 187 TLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVV 246
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
P+ + LS VL AC L L G+ H ++ G + + N L+D Y C + A
Sbjct: 247 PDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLM-NVLIDSYVKCGRVI-AAH 304
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAVSACAS 220
+F + KN +SWTTL++GY + +F M + L P ++ S +++CAS
Sbjct: 305 KLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSM--SKFGLKPDMYACSSILTSCAS 362
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTL 280
+ + G Q+HA I ++ V NS++DMY +C C ++A++ F D + +N +
Sbjct: 363 LHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAM 422
Query: 281 IAGFETLDSK----ESLCIFSLM 299
I G+ L ++ E+L IF M
Sbjct: 423 IEGYSRLGTQWELHEALNIFRDM 445
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 133/265 (50%), Gaps = 6/265 (2%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHH---SRAWKVFPRML 97
+T LI Y + +A +FD DVV + AMI GY+ A +F M
Sbjct: 387 VTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMR 446
Query: 98 RDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDS 157
+RP+ T ++L+A L +L + HGL K G I+ +AL+D+Y+ C
Sbjct: 447 FRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGL-NLDIFAGSALIDVYSNCY-C 504
Query: 158 MDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSA 217
+ +R+VF+++ K+ V W ++ GY + + L +F ++ L F+F+ V+A
Sbjct: 505 LKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTA 564
Query: 218 CASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITW 277
++ S LG++ H ++ G + N + N++LDMY +C +A + F +D + W
Sbjct: 565 AGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCW 624
Query: 278 NTLIAGFETL-DSKESLCIFSLMVS 301
N++I+ + + K++L + M+S
Sbjct: 625 NSVISSYANHGEGKKALQMLEKMMS 649
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 118/240 (49%), Gaps = 3/240 (1%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
LI Y + ++++ +FDEM +D+V W +M GY + + A +F + RP+
Sbjct: 495 LIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPD 554
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
FT + ++ A L ++ G+ H +K G + Y+ NAL+DMYA C D A
Sbjct: 555 EFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNP-YITNALLDMYAKCGSPED-AHKA 612
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
F+ +++ V W ++I+ Y + G+ L++ +M+ E E + +F +SAC+ G
Sbjct: 613 FDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLV 672
Query: 225 ILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM-TQKDTITWNTLIAG 283
G + ++ G + ++ + R ++A++ +M T+ I W +L++G
Sbjct: 673 EDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSG 732
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 3/149 (2%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+T L+ Y GS ++AH FD RDVV W ++I+ Y + +A ++ +M+ +G
Sbjct: 592 ITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEG 651
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
+ PN T VL AC + G L ++ G + + M +++
Sbjct: 652 IEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHY--VCMVSLLGRAGRLNK 709
Query: 161 ARMVFEDIVTK-NAVSWTTLITGYTHRGD 188
AR + E + TK A+ W +L++G G+
Sbjct: 710 ARELIEKMPTKPAAIVWRSLLSGCAKAGN 738
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 131/246 (53%), Gaps = 3/246 (1%)
Query: 55 IQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKA 114
+ +A LFD+M RD+V+W MI+GY S + S K+ RM DG+RP+ T A L
Sbjct: 195 VGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSV 254
Query: 115 CKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAV 174
+ L G + H VK G +++ AL+ MY C R V E I K+ V
Sbjct: 255 SGTMCDLEMGRMLHCQIVKTGF-DVDMHLKTALITMYLKCGKEEASYR-VLETIPNKDVV 312
Query: 175 SWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAV 234
WT +I+G G A L VF +M+ +LS + + V++CA +GS LG +H V
Sbjct: 313 CWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYV 372
Query: 235 INHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF-ETLDSKESL 293
+ HG+ + P +NS++ MY +C ++ F M ++D ++WN +I+G+ + +D ++L
Sbjct: 373 LRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKAL 432
Query: 294 CIFSLM 299
+F M
Sbjct: 433 LLFEEM 438
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 128/245 (52%), Gaps = 3/245 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L T LI Y G + ++ + + + ++DVV WT MI+G +A VF ML+ G
Sbjct: 282 LKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSG 341
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
++ +++V+ +C L + G HG ++ G + + N+L+ MYA C +D+
Sbjct: 342 SDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPAL-NSLITMYAK-CGHLDK 399
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEE-GELSPFSFSIAVSACA 219
+ ++FE + ++ VSW +I+GY D L +F +M + ++ F+ + AC+
Sbjct: 400 SLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACS 459
Query: 220 SVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNT 279
S G+ +GK +H VI + V +++DMY +C A++ F ++ KD ++W
Sbjct: 460 SAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGI 519
Query: 280 LIAGF 284
LIAG+
Sbjct: 520 LIAGY 524
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 126/261 (48%), Gaps = 6/261 (2%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+++ L+ Y G + A +F+EM RDVV WTAMI Y+ A + M G
Sbjct: 83 ISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQG 142
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
++P TL +L + L C H AV G I V N+++++Y CD +
Sbjct: 143 IKPGPVTLLEMLSGVLEITQLQC---LHDFAVIYGF-DCDIAVMNSMLNLYCK-CDHVGD 197
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
A+ +F+ + ++ VSW T+I+GY G+ L++ +M + +F ++S +
Sbjct: 198 AKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGT 257
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTL 280
+ +G+ LH ++ GF ++ + +++ MY +C + + + KD + W +
Sbjct: 258 MCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVM 317
Query: 281 IAGFETLDSKE-SLCIFSLMV 300
I+G L E +L +FS M+
Sbjct: 318 ISGLMRLGRAEKALIVFSEML 338
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 110/215 (51%), Gaps = 5/215 (2%)
Query: 73 WTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAV 132
+ + I +S H + F ML + + P+ FT ++LKAC L+ L G H V
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQ-QV 72
Query: 133 KIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGG 192
+ S Y+ ++L+++YA + AR VFE++ ++ V WT +I Y+ G
Sbjct: 73 LVNGFSSDFYISSSLVNLYAKF-GLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEA 131
Query: 193 LRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDM 252
+ +M + + P + +S + + LH + +GF ++ VMNS+L++
Sbjct: 132 CSLVNEMRFQGIKPGPVTLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVMNSMLNL 188
Query: 253 YCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETL 287
YC+C +AK F +M Q+D ++WNT+I+G+ ++
Sbjct: 189 YCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASV 223
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 122/233 (52%), Gaps = 4/233 (1%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRP- 103
LI Y G + ++ +F+ M RD+V+W A+I+GY +A +F M V+
Sbjct: 387 LITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQV 446
Query: 104 NAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARM 163
++FT+ ++L+AC AL G+L H + ++ R S+ VD AL+DMY+ C ++ A+
Sbjct: 447 DSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSL-VDTALVDMYSKC-GYLEAAQR 504
Query: 164 VFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGS 223
F+ I K+ VSW LI GY G L ++ + + E + F +S+C+ G
Sbjct: 505 CFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGM 564
Query: 224 GILGKQLHAAVI-NHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTI 275
G ++ ++++ + G + N + ++D+ CR + +A +F+ E + +I
Sbjct: 565 VQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSI 617
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 144 bits (363), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 142/243 (58%), Gaps = 3/243 (1%)
Query: 42 TTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYT-SCNHHSRAWKVFPRMLRDG 100
+LI Y GS+++A +FD+M HR+VV++ A+ + Y+ + + S A+ + M +
Sbjct: 135 NNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEY 194
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
V+PN+ T +++++ C L + G + +K+G ++ V +++ MY++C D ++
Sbjct: 195 VKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLG-YSDNVVVQTSVLGMYSSCGD-LES 252
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
AR +F+ + ++AV+W T+I G GL FR M++ + + F++SI ++ C+
Sbjct: 253 ARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSK 312
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTL 280
+GS LGK +HA +I ++LP+ N++LDMYC C EA F + + ++WN++
Sbjct: 313 LGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSI 372
Query: 281 IAG 283
I+G
Sbjct: 373 ISG 375
Score = 130 bits (328), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 126/252 (50%), Gaps = 3/252 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ T ++ Y G ++ A +FD + +RD VAW MI G + F ML G
Sbjct: 236 VQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSG 295
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
V P FT S VL C L + G+L H + + + + +DNAL+DMY +C D M
Sbjct: 296 VDPTQFTYSIVLNGCSKLGSYSLGKLIHARII-VSDSLADLPLDNALLDMYCSCGD-MRE 353
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMV-LEEGELSPFSFSIAVSACA 219
A VF I N VSW ++I+G + G + ++R+++ + ++FS A+SA A
Sbjct: 354 AFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATA 413
Query: 220 SVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNT 279
+ GK LH V G++ ++ V ++L MY + R A A++ F M ++D + W
Sbjct: 414 EPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTE 473
Query: 280 LIAGFETLDSKE 291
+I G L + E
Sbjct: 474 MIVGHSRLGNSE 485
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 130/265 (49%), Gaps = 7/265 (2%)
Query: 21 VLHHRTQLNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGY 80
++H R ++DS DL L L+ Y G ++EA +F + + ++V+W ++I+G
Sbjct: 321 LIHARIIVSDSL---ADLP-LDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGC 376
Query: 81 TSCNHHSRAWKVFPRMLRDGV-RPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGS 139
+ +A ++ R+LR RP+ +T SA + A G+L HG K+G
Sbjct: 377 SENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYE-R 435
Query: 140 SIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQM 199
S++V L+ MY ++ + A+ VF+ + ++ V WT +I G++ G++ ++ F +M
Sbjct: 436 SVFVGTTLLSMYFKNREA-ESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEM 494
Query: 200 VLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCA 259
E+ FS S + AC+ + G+ H I GF + V +++DMY +
Sbjct: 495 YREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKY 554
Query: 260 SEAKQFFCEMTQKDTITWNTLIAGF 284
A+ F + D WN+++ +
Sbjct: 555 ETAETIFSLASNPDLKCWNSMLGAY 579
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 123/264 (46%), Gaps = 10/264 (3%)
Query: 42 TTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAM--ITGYTSCNH--HSRAWKV--FPR 95
+LI Y S+++A +FD+M R++V + + Y S HS+ K+ F
Sbjct: 25 NNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQM 84
Query: 96 MLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGS--SIYVDNALMDMYAT 153
+ + A ++ + + C + L H L + GA + S Y +N L+ MY
Sbjct: 85 IFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVR 144
Query: 154 CCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGD-AFGGLRVFRQMVLEEGELSPFSFS 212
C S+++AR VF+ + +N VS+ L + Y+ D A + M E + + +F+
Sbjct: 145 C-GSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFT 203
Query: 213 IAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK 272
V CA + ++G L++ +I G+ N+ V S+L MY C A++ F + +
Sbjct: 204 SLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNR 263
Query: 273 DTITWNTLIAGFETLDSKESLCIF 296
D + WNT+I G D E +F
Sbjct: 264 DAVAWNTMIVGSLKNDKIEDGLMF 287
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 112/244 (45%), Gaps = 6/244 (2%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
T L+ YF + A +FD M RDVV WT MI G++ + A + F M R+ R
Sbjct: 441 TTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNR 500
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
+ F+LS+V+ AC + L GE+ H LA++ G + V AL+DMY + A
Sbjct: 501 SDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGF-DCVMSVCGALVDMYGK-NGKYETAE 558
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGEL-SPFSFSIAVSACASV 221
+F + W +++ Y+ G L F Q +LE G + ++ ++AC+
Sbjct: 559 TIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQ-ILENGFMPDAVTYLSLLAACSHR 617
Query: 222 GSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTIT--WNT 279
GS + GK L + G ++ + ++++ + EA + + + W T
Sbjct: 618 GSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRT 677
Query: 280 LIAG 283
L++
Sbjct: 678 LLSA 681
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 144 bits (363), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 142/271 (52%), Gaps = 17/271 (6%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
++ Y G ++A LF++M DVV W+A I+GY A V +ML G
Sbjct: 301 MVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG 360
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKI------GARGSSIYVDNALMDMYATC 154
++PN TL +VL C + AL G+ H A+K G V N L+DMYA
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAK- 419
Query: 155 CDSMDRARMVFEDIVTK--NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFS 212
C +D AR +F+ + K + V+WT +I GY+ GDA L + +M E+ + P +F+
Sbjct: 420 CKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFT 479
Query: 213 I--AVSACASVGSGILGKQLHA-AVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM 269
I A+ ACAS+ + +GKQ+HA A+ N L V N ++DMY +C S+A+ F M
Sbjct: 480 ISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNM 539
Query: 270 TQKDTITWNTLIAGFETLD-SKESLCIFSLM 299
K+ +TW +L+ G+ +E+L IF M
Sbjct: 540 MAKNEVTWTSLMTGYGMHGYGEEALGIFDEM 570
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 129/255 (50%), Gaps = 7/255 (2%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRD--VVAWTAMITGYTSCNHHSRAWKVFPRMLR 98
LT+ LI +Y G + A +L D V W ++I Y ++ +F M
Sbjct: 61 LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHS 120
Query: 99 DGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSM 158
P+ +T V KAC + ++ CGE AH L++ G S+++V NAL+ MY+ C S+
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFI-SNVFVGNALVAMYSRC-RSL 178
Query: 159 DRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA--VS 216
AR VF+++ + VSW ++I Y G L +F +M E G P + ++ +
Sbjct: 179 SDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFG-CRPDNITLVNVLP 237
Query: 217 ACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTIT 276
CAS+G+ LGKQLH + N+ V N ++DMY +C EA F M+ KD ++
Sbjct: 238 PCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVS 297
Query: 277 WNTLIAGFETLDSKE 291
WN ++AG+ + E
Sbjct: 298 WNAMVAGYSQIGRFE 312
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 140/301 (46%), Gaps = 48/301 (15%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRD-GVRP 103
L+ Y S+ +A +FDEM+ DVV+W ++I Y A ++F RM + G RP
Sbjct: 168 LVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRP 227
Query: 104 NAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARM 163
+ TL VL C L G+ H AV +++V N L+DMYA C MD A
Sbjct: 228 DNITLVNVLPPCASLGTHSLGKQLHCFAVT-SEMIQNMFVGNCLVDMYAKC-GMMDEANT 285
Query: 164 VFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAV-------- 215
VF ++ K+ VSW ++ GY+ G +R+F +M E+ ++ ++S A+
Sbjct: 286 VFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGL 345
Query: 216 ---------------------------SACASVGSGILGKQLHAAVINH-------GFQS 241
S CASVG+ + GK++H I + G
Sbjct: 346 GYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGD 405
Query: 242 NLPVMNSILDMYCRCRCASEAKQFFCEMT--QKDTITWNTLIAGF-ETLDSKESLCIFSL 298
V+N ++DMY +C+ A+ F ++ ++D +TW +I G+ + D+ ++L + S
Sbjct: 406 ENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSE 465
Query: 299 M 299
M
Sbjct: 466 M 466
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 99/190 (52%), Gaps = 5/190 (2%)
Query: 37 DLTGLTTDLIKSYFDKGSIQEAHTLFDEMT--HRDVVAWTAMITGYTSCNHHSRAWKVFP 94
D + LI Y + A +FD ++ RDVV WT MI GY+ ++A ++
Sbjct: 405 DENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLS 464
Query: 95 RMLRDG--VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYA 152
M + RPNAFT+S L AC L AL G+ H A++ ++V N L+DMYA
Sbjct: 465 EMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYA 524
Query: 153 TCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFS 212
C S+ AR+VF++++ KN V+WT+L+TGY G L +F +M +L +
Sbjct: 525 K-CGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLL 583
Query: 213 IAVSACASVG 222
+ + AC+ G
Sbjct: 584 VVLYACSHSG 593
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 139/246 (56%), Gaps = 8/246 (3%)
Query: 57 EAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLR-DGVRPNAFTLSAVLKAC 115
+A +FDEM DV+ WTA+++ ++ + + A +F M R G+ P+ T VL AC
Sbjct: 216 DARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTAC 275
Query: 116 KGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVS 175
LR L G+ HG + G GS++ V+++L+DMY C S+ AR VF + KN+VS
Sbjct: 276 GNLRRLKQGKEIHGKLITNGI-GSNVVVESSLLDMYGKC-GSVREARQVFNGMSKKNSVS 333
Query: 176 WTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVI 235
W+ L+ GY G+ + +FR+M EE +L + F + ACA + + LGK++H +
Sbjct: 334 WSALLGGYCQNGEHEKAIEIFREM--EEKDL--YCFGTVLKACAGLAAVRLGKEIHGQYV 389
Query: 236 NHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF-ETLDSKESLC 294
G N+ V ++++D+Y + C A + + +M+ ++ ITWN +++ + +E++
Sbjct: 390 RRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVS 449
Query: 295 IFSLMV 300
F+ MV
Sbjct: 450 FFNDMV 455
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 148/270 (54%), Gaps = 11/270 (4%)
Query: 39 TGLTTD------LIKSYFDKG-SIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWK 91
+GL TD L+ YF G ++E +FD +D ++WT+M++GY + H +A +
Sbjct: 90 SGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALE 149
Query: 92 VFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMY 151
VF M+ G+ N FTLS+ +KAC L + G HG+ + G + ++ + L +Y
Sbjct: 150 VFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNH-FISSTLAYLY 208
Query: 152 ATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFS- 210
+ +D AR VF+++ + + WT +++ ++ L +F M +G + S
Sbjct: 209 GVNREPVD-ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGST 267
Query: 211 FSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT 270
F ++AC ++ GK++H +I +G SN+ V +S+LDMY +C EA+Q F M+
Sbjct: 268 FGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMS 327
Query: 271 QKDTITWNTLIAGF-ETLDSKESLCIFSLM 299
+K++++W+ L+ G+ + + ++++ IF M
Sbjct: 328 KKNSVSWSALLGGYCQNGEHEKAIEIFREM 357
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 99/192 (51%), Gaps = 2/192 (1%)
Query: 109 SAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDI 168
+++L+ C + + G H VK G + V N+L+ +Y M R VF+
Sbjct: 65 ASLLQTCNKVFSFIHGIQFHAHVVKSGLE-TDRNVGNSLLSLYFKLGPGMRETRRVFDGR 123
Query: 169 VTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGK 228
K+A+SWT++++GY + L VF +MV + + F+ S AV AC+ +G LG+
Sbjct: 124 FVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGR 183
Query: 229 QLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLD 288
H VI HGF+ N + +++ +Y R +A++ F EM + D I W +++ F D
Sbjct: 184 CFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKND 243
Query: 289 -SKESLCIFSLM 299
+E+L +F M
Sbjct: 244 LYEEALGLFYAM 255
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 115/246 (46%), Gaps = 12/246 (4%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ + L+ Y GS++EA +F+ M+ ++ V+W+A++ GY H +A ++F R+
Sbjct: 302 VESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIF----REM 357
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYAT--CCDSM 158
+ + VLKAC GL A+ G+ HG V+ G G+ I V++AL+D+Y C DS
Sbjct: 358 EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVI-VESALIDLYGKSGCIDSA 416
Query: 159 DRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSAC 218
R V+ + +N ++W +++ G + F MV + + SF ++AC
Sbjct: 417 SR---VYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTAC 473
Query: 219 ASVGSGILGKQLHAAVI-NHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT-QKDTIT 276
G G+ + ++G + + ++D+ R EA+ + D
Sbjct: 474 GHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASL 533
Query: 277 WNTLIA 282
W L+
Sbjct: 534 WGVLLG 539
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 136/247 (55%), Gaps = 5/247 (2%)
Query: 57 EAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACK 116
+A +F EMT R + W ++ + F M RD +P+ FTL LKAC
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 117 GLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSW 176
LR + GE+ HG K GS +YV ++L+ MY C ++ RM F+++ + V+W
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRM-FDELEKPDIVTW 130
Query: 177 TTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA--VSACASVGSGILGKQLHAAV 234
+++++G+ G + + FR+MV+ +++P ++ VSAC + + LG+ +H V
Sbjct: 131 SSMVSGFEKNGSPYQAVEFFRRMVM-ASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFV 189
Query: 235 INHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF-ETLDSKESL 293
I GF ++L ++NS+L+ Y + R EA F + +KD I+W+T+IA + + + E+L
Sbjct: 190 IRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEAL 249
Query: 294 CIFSLMV 300
+F+ M+
Sbjct: 250 LVFNDMM 256
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 121/245 (49%), Gaps = 3/245 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L L+ Y + +EA LF + +DV++W+ +I Y + A VF M+ DG
Sbjct: 200 LVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDG 259
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
PN T+ VL+AC L G H LA++ G + + V AL+DMY C S +
Sbjct: 260 TEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLE-TEVKVSTALVDMYMKCF-SPEE 317
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAV-SACA 219
A VF I K+ VSW LI+G+T G A + F M+LE + V +C+
Sbjct: 318 AYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCS 377
Query: 220 SVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNT 279
+G K H+ VI +GF SN + S++++Y RC A + F + KDT+ W +
Sbjct: 378 ELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTS 437
Query: 280 LIAGF 284
LI G+
Sbjct: 438 LITGY 442
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 139/276 (50%), Gaps = 11/276 (3%)
Query: 33 FRPKDLT-----GLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHS 87
F KD+T + + LI Y G + EA +FDE+ D+V W++M++G+
Sbjct: 85 FVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPY 144
Query: 88 RAWKVFPRM-LRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNA 146
+A + F RM + V P+ TL ++ AC L G HG ++ G + + + N+
Sbjct: 145 QAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGF-SNDLSLVNS 203
Query: 147 LMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGEL 206
L++ YA + A +F+ I K+ +SW+T+I Y G A L VF M+ + E
Sbjct: 204 LLNCYAKS-RAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEP 262
Query: 207 SPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFF 266
+ + + ACA+ G++ H I G ++ + V +++DMY +C EA F
Sbjct: 263 NVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVF 322
Query: 267 CEMTQKDTITWNTLIAGFETLD--SKESLCIFSLMV 300
+ +KD ++W LI+GF TL+ + S+ FS+M+
Sbjct: 323 SRIPRKDVVSWVALISGF-TLNGMAHRSIEEFSIML 357
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 7/219 (3%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRML-RD 99
++T L+ Y S +EA+ +F + +DVV+W A+I+G+T R+ + F ML +
Sbjct: 301 VSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLEN 360
Query: 100 GVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD 159
RP+A + VL +C L L + H +K G S+ ++ +L+++Y+ C S+
Sbjct: 361 NTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGF-DSNPFIGASLVELYSRC-GSLG 418
Query: 160 RARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAVSA 217
A VF I K+ V WT+LITGY G L F MV + E+ P +F +SA
Sbjct: 419 NASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMV-KSSEVKPNEVTFLSILSA 477
Query: 218 CASVGSGILGKQLHAAVIN-HGFQSNLPVMNSILDMYCR 255
C+ G G ++ ++N + NL ++D+ R
Sbjct: 478 CSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGR 516
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 135/260 (51%), Gaps = 3/260 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L L+ Y G + + +F+++ ++ V+WTAMI+ Y +A + F M++ G
Sbjct: 239 LCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSG 298
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
+ PN TL +VL +C + + G+ HG AV+ + + AL+++YA C D
Sbjct: 299 IEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSD- 357
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
V + +N V+W +LI+ Y HRG L +FRQMV + + F+ + ++SAC +
Sbjct: 358 CETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACEN 417
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTL 280
G LGKQ+H VI V NS++DMY + A F ++ + +TWN++
Sbjct: 418 AGLVPLGKQIHGHVIRTDVSDEF-VQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSM 476
Query: 281 IAGF-ETLDSKESLCIFSLM 299
+ GF + +S E++ +F M
Sbjct: 477 LCGFSQNGNSVEAISLFDYM 496
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 124/244 (50%), Gaps = 5/244 (2%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ T L+ Y G++ +A +FD M RD+VAW+ +++ +A ++F M+ DG
Sbjct: 138 IETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDG 197
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHG-LAVKIGARGSSIYVDNALMDMYATCCDSMD 159
V P+A T+ +V++ C L L HG + K+ ++ N+L+ MY+ C D +
Sbjct: 198 VEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLC--NSLLTMYSKCGDLLS 255
Query: 160 RARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACA 219
R +FE I KNAVSWT +I+ Y + LR F +M+ E + + +S+C
Sbjct: 256 SER-IFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCG 314
Query: 220 SVGSGILGKQLHAAVINHGFQSNLPVMN-SILDMYCRCRCASEAKQFFCEMTQKDTITWN 278
+G GK +H + N ++ +++++Y C S+ + ++ ++ + WN
Sbjct: 315 LIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWN 374
Query: 279 TLIA 282
+LI+
Sbjct: 375 SLIS 378
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 125/229 (54%), Gaps = 4/229 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L+ L++ Y + G + + T+ ++ R++VAW ++I+ Y +A +F +M+
Sbjct: 341 LSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQR 400
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
++P+AFTL++ + AC+ + G+ HG ++ S +V N+L+DMY+ S+D
Sbjct: 401 IKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDV--SDEFVQNSLIDMYSKS-GSVDS 457
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
A VF I ++ V+W +++ G++ G++ + +F M E++ +F + AC+S
Sbjct: 458 ASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSS 517
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM 269
+GS GK +H +I G + +L +++DMY +C + A+ F M
Sbjct: 518 IGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAM 565
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 129/261 (49%), Gaps = 4/261 (1%)
Query: 42 TTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGV 101
T LI+SY GS + +F+ + D + +I C+ A ++ R++ +
Sbjct: 37 VTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETT 96
Query: 102 RPNAFTLSAVLKACKGLRA-LFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
+ + F +VL+AC G R L G HG +K G ++ ++ +L+ MY + D
Sbjct: 97 QISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAV-IETSLLCMYGQTGNLSD- 154
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
A VF+ + ++ V+W+TL++ G+ LR+F+ MV + E + V CA
Sbjct: 155 AEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAE 214
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTL 280
+G + + +H + F + + NS+L MY +C +++ F ++ +K+ ++W +
Sbjct: 215 LGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAM 274
Query: 281 IAGFETLD-SKESLCIFSLMV 300
I+ + + S+++L FS M+
Sbjct: 275 ISSYNRGEFSEKALRSFSEMI 295
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 113/244 (46%), Gaps = 4/244 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ LI Y GS+ A T+F+++ HR VV W +M+ G++ + A +F M
Sbjct: 441 VQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSY 500
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
+ N T AV++AC + +L G+ H + G + ++ D AL+DMYA C D ++
Sbjct: 501 LEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK--DLFTDTALIDMYAKCGD-LNA 557
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
A VF + +++ VSW+++I Y G + F QMV + + F +SAC
Sbjct: 558 AETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGH 617
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT-QKDTITWNT 279
GS GK + + G N +D+ R EA + EM D W +
Sbjct: 618 SGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGS 677
Query: 280 LIAG 283
L+ G
Sbjct: 678 LVNG 681
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 126/240 (52%), Gaps = 2/240 (0%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
L+ YF G++ A +F M+ RD V + +I G + C + +A ++F RM DG+ P+
Sbjct: 329 LVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 388
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
+ TL++++ AC LF G+ H K+G S+ ++ AL+++YA C D ++ A
Sbjct: 389 SNTLASLVVACSADGTLFRGQQLHAYTTKLGF-ASNNKIEGALLNLYAKCAD-IETALDY 446
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
F + +N V W ++ Y D R+FRQM +EE + +++ + C +G
Sbjct: 447 FLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL 506
Query: 225 ILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
LG+Q+H+ +I FQ N V + ++DMY + A KD ++W T+IAG+
Sbjct: 507 ELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGY 566
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 130/252 (51%), Gaps = 9/252 (3%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
LI Y G + A + +DVV+WT MI GYT N +A F +ML G+R +
Sbjct: 531 LIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSD 590
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
L+ + AC GL+AL G+ H A + S + NAL+ +Y+ C ++ + +
Sbjct: 591 EVGLTNAVSACAGLQALKEGQQIHAQAC-VSGFSSDLPFQNALVTLYSRC-GKIEESYLA 648
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
FE + ++W L++G+ G+ LRVF +M E + + F+F AV A + +
Sbjct: 649 FEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANM 708
Query: 225 ILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
GKQ+HA + G+ S V N+++ MY +C S+A++ F E++ K+ ++WN +I +
Sbjct: 709 KQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAY 768
Query: 285 -------ETLDS 289
E LDS
Sbjct: 769 SKHGFGSEALDS 780
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 137/265 (51%), Gaps = 3/265 (1%)
Query: 36 KDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPR 95
+D T + LI Y G + A +FD + +D +W AMI+G + + A ++F
Sbjct: 219 RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCD 278
Query: 96 MLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCC 155
M G+ P + S+VL ACK + +L GE HGL +K+G S YV NAL+ +Y
Sbjct: 279 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF-SSDTYVCNALVSLYFHLG 337
Query: 156 DSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAV 215
+ + A +F ++ ++AV++ TLI G + G + +F++M L+ E + + V
Sbjct: 338 NLIS-AEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLV 396
Query: 216 SACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTI 275
AC++ G+ G+QLHA GF SN + ++L++Y +C A +F E ++ +
Sbjct: 397 VACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVV 456
Query: 276 TWNTLIAGFETLDS-KESLCIFSLM 299
WN ++ + LD + S IF M
Sbjct: 457 LWNVMLVAYGLLDDLRNSFRIFRQM 481
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 126/245 (51%), Gaps = 3/245 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L+ L Y KG + A +FDEM R + W MI S N + +F RM+ +
Sbjct: 122 LSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSEN 181
Query: 101 VRPNAFTLSAVLKACKGLRALF-CGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD 159
V PN T S VL+AC+G F E H + G R S++ V N L+D+Y+ +D
Sbjct: 182 VTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTV-VCNPLIDLYSRN-GFVD 239
Query: 160 RARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACA 219
AR VF+ + K+ SW +I+G + +R+F M + +P++FS +SAC
Sbjct: 240 LARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACK 299
Query: 220 SVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNT 279
+ S +G+QLH V+ GF S+ V N+++ +Y A+ F M+Q+D +T+NT
Sbjct: 300 KIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNT 359
Query: 280 LIAGF 284
LI G
Sbjct: 360 LINGL 364
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 91/191 (47%), Gaps = 12/191 (6%)
Query: 100 GVRPNAFTLSAVLKAC-KGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSM 158
G+RPN TL +L+ C K +L G H +K+G + + L D Y D +
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGC-LSEKLFDFYLFKGD-L 136
Query: 159 DRARMVFEDIVTKNAVSWTTLITGYTHR---GDAFGGLRVFRQMVLEEGELSPFSFSIAV 215
A VF+++ + +W +I R G+ FG +F +MV E + +FS +
Sbjct: 137 YGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFG---LFVRMVSENVTPNEGTFSGVL 193
Query: 216 SAC--ASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKD 273
AC SV ++ +Q+HA ++ G + + V N ++D+Y R A++ F + KD
Sbjct: 194 EACRGGSVAFDVV-EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKD 252
Query: 274 TITWNTLIAGF 284
+W +I+G
Sbjct: 253 HSSWVAMISGL 263
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 105/249 (42%), Gaps = 23/249 (9%)
Query: 39 TGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLR 98
T + LI Y GSI +A F E++ ++ V+W A+I Y+ S A F +M+
Sbjct: 727 TEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIH 786
Query: 99 DGVRPNAFTLSAVLKAC-------KGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMY 151
VRPN TL VL AC KG+ +GL+ K YV ++DM
Sbjct: 787 SNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPK-----PEHYV--CVVDML 839
Query: 152 ATCCDSMDRARMVFEDIVTK-NAVSWTTLITG-YTHRGDAFGGLRVFRQMVLEEGELSPF 209
T + RA+ +++ K +A+ W TL++ H+ G + LE + + +
Sbjct: 840 -TRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATY 898
Query: 210 ---SFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCR---CASEAK 263
S AVS K V QS + V NSI Y + A E
Sbjct: 899 VLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIH 958
Query: 264 QFFCEMTQK 272
++F ++T++
Sbjct: 959 EYFQDLTKR 967
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 136/243 (55%), Gaps = 3/243 (1%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
T ++ + D +++A LFDEM D W MI G+TSC + A + + RM+ GV+
Sbjct: 68 TRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVK 127
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
+ FT V+K+ G+ +L G+ H + +K+G S +YV N+L+ +Y + D A
Sbjct: 128 ADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFV-SDVYVCNSLISLYMKLGCAWD-AE 185
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVG 222
VFE++ ++ VSW ++I+GY GD F L +F++M+ + FS A+ AC+ V
Sbjct: 186 KVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVY 245
Query: 223 SGILGKQLHAAVINHGFQS-NLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLI 281
S +GK++H + ++ ++ VM SILDMY + S A++ F M Q++ + WN +I
Sbjct: 246 SPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMI 305
Query: 282 AGF 284
+
Sbjct: 306 GCY 308
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 137/265 (51%), Gaps = 12/265 (4%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRM-LRD 99
+ T ++ Y G + A +F+ M R++VAW MI Y + A+ F +M ++
Sbjct: 269 VMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQN 328
Query: 100 GVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD 159
G++P+ T +L A A+ G HG A++ G + ++ AL+DMY C +
Sbjct: 329 GLQPDVITSINLLPAS----AILEGRTIHGYAMRRGFLPHMV-LETALIDMYGEC-GQLK 382
Query: 160 RARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA--VSA 217
A ++F+ + KN +SW ++I Y G + L +F++ L + L P S +IA + A
Sbjct: 383 SAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQE--LWDSSLVPDSTTIASILPA 440
Query: 218 CASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITW 277
A S G+++HA ++ + SN ++NS++ MY C +A++ F + KD ++W
Sbjct: 441 YAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSW 500
Query: 278 NTLIAGFETLD-SKESLCIFSLMVS 301
N++I + + S+ +FS M++
Sbjct: 501 NSIIMAYAVHGFGRISVWLFSEMIA 525
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 119/245 (48%), Gaps = 8/245 (3%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L T LI Y + G ++ A +FD M ++V++W ++I Y + A ++F +
Sbjct: 367 LETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSS 426
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
+ P++ T++++L A +L G H VK ++I + N+L+ MYA C D ++
Sbjct: 427 LVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIIL-NSLVHMYAMCGD-LED 484
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRV--FRQMVLEEGELSPFSFSIAVSAC 218
AR F I+ K+ VSW ++I Y G FG + V F +M+ + +F+ ++AC
Sbjct: 485 ARKCFNHILLKDVVSWNSIIMAYAVHG--FGRISVWLFSEMIASRVNPNKSTFASLLAAC 542
Query: 219 ASVGSGILGKQLHAAVI-NHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTI-T 276
+ G G + ++ +G + +LD+ R S AK+F EM T
Sbjct: 543 SISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARI 602
Query: 277 WNTLI 281
W +L+
Sbjct: 603 WGSLL 607
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 83/144 (57%), Gaps = 1/144 (0%)
Query: 158 MDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSA 217
M+ A +F+++ +A W +I G+T G ++ + +MV + F++ + +
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 218 CASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITW 277
A + S GK++HA VI GF S++ V NS++ +Y + CA +A++ F EM ++D ++W
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSW 199
Query: 278 NTLIAGFETL-DSKESLCIFSLMV 300
N++I+G+ L D SL +F M+
Sbjct: 200 NSMISGYLALGDGFSSLMLFKEML 223
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 142 bits (357), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 132/244 (54%), Gaps = 6/244 (2%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
T L Y + EA +FD M RD+V+W ++ GY+ A ++ M + ++
Sbjct: 174 TGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLK 233
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
P+ T+ +VL A LR + G+ HG A++ G S + + AL+DMYA C S++ AR
Sbjct: 234 PSFITIVSVLPAVSALRLISVGKEIHGYAMRSGF-DSLVNISTALVDMYAKC-GSLETAR 291
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSI--AVSACAS 220
+F+ ++ +N VSW ++I Y + + +F++M L+EG + P S+ A+ ACA
Sbjct: 292 QLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKM-LDEG-VKPTDVSVMGALHACAD 349
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTL 280
+G G+ +H + G N+ V+NS++ MYC+C+ A F ++ + ++WN +
Sbjct: 350 LGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAM 409
Query: 281 IAGF 284
I GF
Sbjct: 410 ILGF 413
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 123/249 (49%), Gaps = 2/249 (0%)
Query: 38 LTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRML 97
L ++T L+ Y GS++ A LFD M R+VV+W +MI Y + A +F +ML
Sbjct: 270 LVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKML 329
Query: 98 RDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDS 157
+GV+P ++ L AC L L G H L+V++G ++ V N+L+ MY C
Sbjct: 330 DEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGL-DRNVSVVNSLISMYCKC-KE 387
Query: 158 MDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSA 217
+D A +F + ++ VSW +I G+ G L F QM + F++ ++A
Sbjct: 388 VDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITA 447
Query: 218 CASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITW 277
A + K +H V+ N+ V +++DMY +C A+ F M+++ TW
Sbjct: 448 IAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTW 507
Query: 278 NTLIAGFET 286
N +I G+ T
Sbjct: 508 NAMIDGYGT 516
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 134/262 (51%), Gaps = 9/262 (3%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
T L+ + GS+ EA +F+ + + V + M+ G+ + +A + F RM D V
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVE 132
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
P + + +LK C L G+ HGL VK G ++ L +MYA C ++ AR
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGF-SLDLFAMTGLENMYAK-CRQVNEAR 190
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVG 222
VF+ + ++ VSW T++ GY+ G A L + + M E L P SF VS +V
Sbjct: 191 KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMC--EENLKP-SFITIVSVLPAVS 247
Query: 223 SGIL---GKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNT 279
+ L GK++H + GF S + + +++DMY +C A+Q F M +++ ++WN+
Sbjct: 248 ALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNS 307
Query: 280 LIAGF-ETLDSKESLCIFSLMV 300
+I + + + KE++ IF M+
Sbjct: 308 MIDAYVQNENPKEAMLIFQKML 329
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 111/239 (46%), Gaps = 7/239 (2%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ LI Y + A ++F ++ R +V+W AMI G+ A F +M
Sbjct: 374 VVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRT 433
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
V+P+ FT +V+ A L + HG+ ++ +++V AL+DMYA C M
Sbjct: 434 VKPDTFTYVSVITAIAELSITHHAKWIHGVVMR-SCLDKNVFVTTALVDMYAKCGAIMI- 491
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAVSAC 218
AR++F+ + ++ +W +I GY G L +F +M ++G + P +F +SAC
Sbjct: 492 ARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEM--QKGTIKPNGVTFLSVISAC 549
Query: 219 ASVGSGILG-KQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTIT 276
+ G G K + N+ + ++ +++D+ R +EA F +M K +
Sbjct: 550 SHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVN 608
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 129/257 (50%), Gaps = 8/257 (3%)
Query: 28 LNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHS 87
L+ PF + LI Y G A LFD +DVV WTAMI G+ S
Sbjct: 134 LDSDPF-------VRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSAS 186
Query: 88 RAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNAL 147
A F M + GV N T+ +VLKA + + G HGL ++ G +++ ++L
Sbjct: 187 EAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSL 246
Query: 148 MDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELS 207
+DMY C D A+ VF+++ ++N V+WT LI GY G+ VF +M+ + +
Sbjct: 247 VDMYGKC-SCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPN 305
Query: 208 PFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFC 267
+ S +SACA VG+ G+++H +I + + N +++D+Y +C C EA F
Sbjct: 306 EKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFE 365
Query: 268 EMTQKDTITWNTLIAGF 284
+ +K+ TW +I GF
Sbjct: 366 RLHEKNVYTWTAMINGF 382
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 112/248 (45%), Gaps = 12/248 (4%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ + L+ Y +A +FDEM R+VV WTA+I GY + VF ML+
Sbjct: 242 IGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSD 301
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVD----NALMDMYATCCD 156
V PN TLS+VL AC + AL G H +K +SI ++ L+D+Y C
Sbjct: 302 VAPNEKTLSSVLSACAHVGALHRGRRVHCYMIK-----NSIEINTTAGTTLIDLYVK-CG 355
Query: 157 SMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVS 216
++ A +VFE + KN +WT +I G+ G A +F M+ + +F +S
Sbjct: 356 CLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLS 415
Query: 217 ACASVGSGILGKQLHAAVINH-GFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDT- 274
ACA G G++L ++ + ++D++ R EAK M + T
Sbjct: 416 ACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTN 475
Query: 275 ITWNTLIA 282
+ W L
Sbjct: 476 VVWGALFG 483
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 108/230 (46%), Gaps = 6/230 (2%)
Query: 58 AHTLFDEMTHRDVVAWTAMITGYTSCNHHSR--AWKVFPRMLRDGVRPNAFTLSAVLKAC 115
A L ++ + W ++I ++ +R ++ + M R+GV P+ T +LKA
Sbjct: 55 ARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAV 114
Query: 116 KGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVS 175
LR + H VK G S +V N+L+ Y++ D A +F+ K+ V+
Sbjct: 115 FKLRDSNPFQF-HAHIVKFGL-DSDPFVRNSLISGYSS-SGLFDFASRLFDGAEDKDVVT 171
Query: 176 WTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVI 235
WT +I G+ G A + F +M + + + A V G+ +H +
Sbjct: 172 WTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYL 231
Query: 236 NHG-FQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
G + ++ + +S++DMY +C C +A++ F EM ++ +TW LIAG+
Sbjct: 232 ETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGY 281
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 137/268 (51%), Gaps = 9/268 (3%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L T LI Y D GS+ A +FD+ R + W A+ T H ++ +M R G
Sbjct: 114 LATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIG 173
Query: 101 VRPNAFTLSAVLKACKG----LRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCD 156
V + FT + VLKAC + L G+ H + G S +Y+ L+DMYA
Sbjct: 174 VESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGY-SSHVYIMTTLVDMYARF-G 231
Query: 157 SMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA-- 214
+D A VF + +N VSW+ +I Y G AF LR FR+M+ E + SP S ++
Sbjct: 232 CVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSV 291
Query: 215 VSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDT 274
+ ACAS+ + GK +H ++ G S LPV+++++ MY RC ++ F M +D
Sbjct: 292 LQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDV 351
Query: 275 ITWNTLIAGFETLD-SKESLCIFSLMVS 301
++WN+LI+ + K+++ IF M++
Sbjct: 352 VSWNSLISSYGVHGYGKKAIQIFEEMLA 379
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 121/246 (49%), Gaps = 6/246 (2%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRD- 99
+ T L+ Y G + A +F M R+VV+W+AMI Y A + F M+R+
Sbjct: 219 IMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRET 278
Query: 100 -GVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSM 158
PN+ T+ +VL+AC L AL G+L HG ++ G S + V +AL+ MY C +
Sbjct: 279 KDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGL-DSILPVISALVTMYGRC-GKL 336
Query: 159 DRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSAC 218
+ + VF+ + ++ VSW +LI+ Y G +++F +M+ +P +F + AC
Sbjct: 337 EVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGAC 396
Query: 219 ASVGSGILGKQLHAAVI-NHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM-TQKDTIT 276
+ G GK+L + +HG + + ++D+ R EA + +M T+
Sbjct: 397 SHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKV 456
Query: 277 WNTLIA 282
W +L+
Sbjct: 457 WGSLLG 462
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 137/259 (52%), Gaps = 14/259 (5%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
++ ++ SY G + A+ LFDEM RD V+W MI+GYTSC AW +F M R G
Sbjct: 37 VSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSG 96
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
+ ++ S +LK ++ GE HGL +K G ++YV ++L+DMYA C+ ++
Sbjct: 97 SDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIK-GGYECNVYVGSSLVDMYAK-CERVED 154
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGD---AF---GGLRVFRQMVLEEGELSPFSFSIA 214
A F++I N+VSW LI G+ D AF G + + + ++ G +P +
Sbjct: 155 AFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLD 214
Query: 215 VSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM-TQKD 273
+ L KQ+HA V+ G Q + + N+++ Y C S+AK+ F + KD
Sbjct: 215 DPMFCN-----LLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKD 269
Query: 274 TITWNTLIAGFETLDSKES 292
I+WN++IAGF + KES
Sbjct: 270 LISWNSMIAGFSKHELKES 288
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 136/243 (55%), Gaps = 4/243 (1%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMT-HRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRP 103
+I SY D GS+ +A +FD + +D+++W +MI G++ A+++F +M R V
Sbjct: 244 MISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVET 303
Query: 104 NAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATC-CDSMDRAR 162
+ +T + +L AC G G+ HG+ +K G + NAL+ MY +M+ A
Sbjct: 304 DIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVT-SATNALISMYIQFPTGTMEDAL 362
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVG 222
+FE + +K+ +SW ++ITG+ +G + ++ F + E ++ ++FS + +C+ +
Sbjct: 363 SLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLA 422
Query: 223 SGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK-DTITWNTLI 281
+ LG+Q+HA GF SN V++S++ MY +C A++ F +++ K T+ WN +I
Sbjct: 423 TLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMI 482
Query: 282 AGF 284
G+
Sbjct: 483 LGY 485
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 100/175 (57%), Gaps = 3/175 (1%)
Query: 126 LAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTH 185
L H A+K G+ S IYV N ++D Y + A M+F+++ +++VSW T+I+GYT
Sbjct: 21 LTHCYAIKCGSI-SDIYVSNRILDSYIKF-GFLGYANMLFDEMPKRDSVSWNTMISGYTS 78
Query: 186 RGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPV 245
G +F M ++ +SFS + ASV LG+Q+H VI G++ N+ V
Sbjct: 79 CGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYV 138
Query: 246 MNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF-ETLDSKESLCIFSLM 299
+S++DMY +C +A + F E+++ ++++WN LIAGF + D K + + LM
Sbjct: 139 GSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLM 193
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 103/190 (54%), Gaps = 5/190 (2%)
Query: 36 KDLTGLTTDLIKSY--FDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVF 93
+ +T T LI Y F G++++A +LF+ + +D+++W ++ITG+ A K F
Sbjct: 337 EQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFF 396
Query: 94 PRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYAT 153
+ ++ + + SA+L++C L L G+ H LA K G S+ +V ++L+ MY+
Sbjct: 397 SYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFV-SNEFVISSLIVMYSK 455
Query: 154 CCDSMDRARMVFEDIVTKNA-VSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFS 212
C ++ AR F+ I +K++ V+W +I GY G L +F QM + +L +F+
Sbjct: 456 C-GIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFT 514
Query: 213 IAVSACASVG 222
++AC+ G
Sbjct: 515 AILTACSHTG 524
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 142/268 (52%), Gaps = 5/268 (1%)
Query: 37 DLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRM 96
+L L L+ Y GS+ +A +FDEM R AW MI Y S + A ++ M
Sbjct: 114 ELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNM 173
Query: 97 LRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCD 156
+GV + A+LKAC LR + G H L VK+G S+ ++ NAL+ MYA D
Sbjct: 174 RVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYH-STGFIVNALVSMYAK-ND 231
Query: 157 SMDRARMVFEDIVTK-NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAV 215
+ AR +F+ K +AV W ++++ Y+ G + L +FR+M + + ++ A+
Sbjct: 232 DLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSAL 291
Query: 216 SACASVGSGILGKQLHAAVINHG-FQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDT 274
+AC LGK++HA+V+ S L V N+++ MY RC +A++ +M D
Sbjct: 292 TACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADV 351
Query: 275 ITWNTLIAGF-ETLDSKESLCIFSLMVS 301
+TWN+LI G+ + L KE+L FS M++
Sbjct: 352 VTWNSLIKGYVQNLMYKEALEFFSDMIA 379
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 125/261 (47%), Gaps = 4/261 (1%)
Query: 39 TGLTTD-LIKSYFDKGSIQEAHTLFDEMTHR-DVVAWTAMITGYTSCNHHSRAWKVFPRM 96
TG + L+ Y + A LFD + D V W ++++ Y++ ++F M
Sbjct: 216 TGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREM 275
Query: 97 LRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCD 156
G PN++T+ + L AC G G+ H +K S +YV NAL+ MY T C
Sbjct: 276 HMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMY-TRCG 334
Query: 157 SMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVS 216
M +A + + + V+W +LI GY L F M+ + S + ++
Sbjct: 335 KMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIA 394
Query: 217 ACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTIT 276
A + + + G +LHA VI HG+ SNL V N+++DMY +C + F M KD I+
Sbjct: 395 ASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLIS 454
Query: 277 WNTLIAGFETLDSK-ESLCIF 296
W T+IAG+ D E+L +F
Sbjct: 455 WTTVIAGYAQNDCHVEALELF 475
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 122/250 (48%), Gaps = 8/250 (3%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
LI Y G + +A + +M + DVV W ++I GY + A + F M+ G + +
Sbjct: 326 LIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSD 385
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDS--MDRAR 162
++++++ A L L G H +K G S++ V N L+DMY+ C + M RA
Sbjct: 386 EVSMTSIIAASGRLSNLLAGMELHAYVIKHGW-DSNLQVGNTLIDMYSKCNLTCYMGRAF 444
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVG 222
+ D K+ +SWTT+I GY L +FR + + E+ + A + +
Sbjct: 445 LRMHD---KDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLK 501
Query: 223 SGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIA 282
S ++ K++H ++ G + + N ++D+Y +CR A + F + KD ++W ++I+
Sbjct: 502 SMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMIS 560
Query: 283 GFETLDSKES 292
L+ ES
Sbjct: 561 S-SALNGNES 569
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 3/191 (1%)
Query: 111 VLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVT 170
VL+ C RA+ G H K ++ L+ MY C S+D A VF+++
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKC-GSLDDAEKVFDEMPD 144
Query: 171 KNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQL 230
+ A +W T+I Y G+ L ++ M +E L SF + ACA + G +L
Sbjct: 145 RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSEL 204
Query: 231 HAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK-DTITWNTLIAGFETL-D 288
H+ ++ G+ S ++N+++ MY + S A++ F +K D + WN++++ + T
Sbjct: 205 HSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGK 264
Query: 289 SKESLCIFSLM 299
S E+L +F M
Sbjct: 265 SLETLELFREM 275
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 119/263 (45%), Gaps = 20/263 (7%)
Query: 39 TGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLR 98
T + +L+ Y ++ A +F+ + +DVV+WT+MI+ + S A ++F RM+
Sbjct: 521 TVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVE 580
Query: 99 DGVRPNAFTLSAVLKAC-------KGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMY 151
G+ ++ L +L A KG R + C L G ++ SI V A++DMY
Sbjct: 581 TGLSADSVALLCILSAAASLSALNKG-REIHCYLLRKGFCLE-----GSIAV--AVVDMY 632
Query: 152 ATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSF 211
A CC + A+ VF+ I K + +T++I Y G + +F +M E SF
Sbjct: 633 A-CCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISF 691
Query: 212 SIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSI--LDMYCRCRCASEAKQFFCEM 269
+ AC+ G G+ ++ H ++ + + +DM R C EA +F M
Sbjct: 692 LALLYACSHAGLLDEGRGF-LKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMM 750
Query: 270 -TQKDTITWNTLIAGFETLDSKE 291
T+ W L+A + KE
Sbjct: 751 KTEPTAEVWCALLAACRSHSEKE 773
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 140 bits (354), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 140/258 (54%), Gaps = 3/258 (1%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
L+ Y G +EA + D + +DVV TA+I GY+ + A K F ML + V+PN
Sbjct: 207 LVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPN 266
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
+T ++VL +C L+ + G+L HGL VK G S++ +L+ MY C D R V
Sbjct: 267 EYTYASVLISCGNLKDIGNGKLIHGLMVKSGFE-SALASQTSLLTMYLRCSLVDDSLR-V 324
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
F+ I N VSWT+LI+G G L FR+M+ + + + F+ S A+ C+++
Sbjct: 325 FKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMF 384
Query: 225 ILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
G+Q+H V +GF + + ++D+Y +C C+ A+ F +++ D I+ NT+I +
Sbjct: 385 EEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSY 444
Query: 285 -ETLDSKESLCIFSLMVS 301
+ +E+L +F M++
Sbjct: 445 AQNGFGREALDLFERMIN 462
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 136/250 (54%), Gaps = 3/250 (1%)
Query: 35 PKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFP 94
P +++G + L+ + G I A +FD M+ R +V W ++I A +++
Sbjct: 97 PAEISG--SKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYR 154
Query: 95 RMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATC 154
M+ + V P+ +TLS+V KA L + +HGLAV +G S+++V +AL+DMY
Sbjct: 155 LMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKF 214
Query: 155 CDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA 214
+ + A++V + + K+ V T LI GY+ +G+ ++ F+ M++E+ + + ++++
Sbjct: 215 GKTRE-AKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASV 273
Query: 215 VSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDT 274
+ +C ++ GK +H ++ GF+S L S+L MY RC ++ + F + +
Sbjct: 274 LISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQ 333
Query: 275 ITWNTLIAGF 284
++W +LI+G
Sbjct: 334 VSWTSLISGL 343
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 113/248 (45%), Gaps = 16/248 (6%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
T L+ Y + ++ +F + + + V+WT++I+G A F +M+RD ++
Sbjct: 306 TSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIK 365
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
PN+FTLS+ L+ C L G HG+ K G Y + L+D+Y C S D AR
Sbjct: 366 PNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDK-YAGSGLIDLYGKCGCS-DMAR 423
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMV---LEEGELSPFSFSIAVSACA 219
+VF+ + + +S T+I Y G L +F +M+ L+ +++ S +A +
Sbjct: 424 LVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSR 483
Query: 220 SVGSGILGKQLHAAVINHGFQSNLPVMNS----ILDMYCRCRCASEAKQFFCEMTQKDTI 275
V G + + + + + N ++D+ R EA+ E+ D +
Sbjct: 484 LVEEG-------CELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLV 536
Query: 276 TWNTLIAG 283
W TL++
Sbjct: 537 LWRTLLSA 544
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/261 (33%), Positives = 141/261 (54%), Gaps = 11/261 (4%)
Query: 28 LNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHS 87
+ SP R D+ T LIK Y +G I+ A LFDE+ +DVV+W AMI+GY ++
Sbjct: 192 FDKSPHR--DVVSYTA-LIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYK 248
Query: 88 RAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNAL 147
A ++F M++ VRP+ T+ V+ AC ++ G H L + GS++ + NAL
Sbjct: 249 EALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH-LWIDDHGFGSNLKIVNAL 307
Query: 148 MDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELS 207
+D+Y+ C + ++ A +FE + K+ +SW TLI GYTH L +F++M L GE +
Sbjct: 308 IDLYSKCGE-LETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEM-LRSGE-T 364
Query: 208 PFSFSI--AVSACASVGSGILGKQLHAAVINH--GFQSNLPVMNSILDMYCRCRCASEAK 263
P ++ + ACA +G+ +G+ +H + G + + S++DMY +C A
Sbjct: 365 PNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAH 424
Query: 264 QFFCEMTQKDTITWNTLIAGF 284
Q F + K +WN +I GF
Sbjct: 425 QVFNSILHKSLSSWNAMIFGF 445
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 133/274 (48%), Gaps = 32/274 (11%)
Query: 58 AHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKG 117
A ++F + +++ W M G+ + A K++ M+ G+ PN++T VLK+C
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 118 LRALFCGELAHGLAVKIGARGSSIYVDNALMDMYA------------------------- 152
+A G+ HG +K+G +YV +L+ MY
Sbjct: 147 SKAFKEGQQIHGHVLKLGC-DLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTA 205
Query: 153 -----TCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELS 207
++ A+ +F++I K+ VSW +I+GY G+ L +F+ M+
Sbjct: 206 LIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 265
Query: 208 PFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFC 267
+ VSACA GS LG+Q+H + +HGF SNL ++N+++D+Y +C A F
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFE 325
Query: 268 EMTQKDTITWNTLIAGFETLD-SKESLCIFSLMV 300
+ KD I+WNTLI G+ ++ KE+L +F M+
Sbjct: 326 RLPYKDVISWNTLIGGYTHMNLYKEALLLFQEML 359
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 99 DGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMD--MYATCCD 156
D +R N +LS +L CK L++L + H +KIG ++ Y + L++ + + +
Sbjct: 29 DSIR-NHPSLS-LLHNCKTLQSL---RIIHAQMIKIGLHNTN-YALSKLIEFCILSPHFE 82
Query: 157 SMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVS 216
+ A VF+ I N + W T+ G+ D L+++ M+ + ++F +
Sbjct: 83 GLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLK 142
Query: 217 ACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYC---RCRCASE------------ 261
+CA + G+Q+H V+ G +L V S++ MY R A +
Sbjct: 143 SCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVS 202
Query: 262 ----------------AKQFFCEMTQKDTITWNTLIAGF-ETLDSKESLCIFSLMV 300
A++ F E+ KD ++WN +I+G+ ET + KE+L +F M+
Sbjct: 203 YTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMM 258
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%)
Query: 39 TGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLR 98
+ L T LI Y G I+ AH +F+ + H+ + +W AMI G+ ++ +F RM +
Sbjct: 404 SSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRK 463
Query: 99 DGVRPNAFTLSAVLKAC 115
G++P+ T +L AC
Sbjct: 464 IGIQPDDITFVGLLSAC 480
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 134/247 (54%), Gaps = 2/247 (0%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ + L+ Y G + A FD M +DV++WTA+I+ + H +A +F ML
Sbjct: 220 VESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHW 279
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
PN FT+ ++LKAC +AL G H L VK + + ++V +LMDMYA C + D
Sbjct: 280 FLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIK-TDVFVGTSLMDMYAKCGEISD- 337
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
R VF+ + +N V+WT++I + G + +FR M + + + AC S
Sbjct: 338 CRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGS 397
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTL 280
VG+ +LGK+LHA +I + + N+ + ++++ +YC+C + +A ++ +D ++W +
Sbjct: 398 VGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAM 457
Query: 281 IAGFETL 287
I+G +L
Sbjct: 458 ISGCSSL 464
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 134/243 (55%), Gaps = 4/243 (1%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
T L+ Y G I + +FD M++R+ V WT++I + A +F M R +
Sbjct: 323 TSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLI 382
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
N T+ ++L+AC + AL G+ H +K + ++Y+ + L+ +Y C +S D A
Sbjct: 383 ANNLTVVSILRACGSVGALLLGKELHAQIIK-NSIEKNVYIGSTLVWLYCKCGESRD-AF 440
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVG 222
V + + +++ VSWT +I+G + G L ++M+ E E +PF++S A+ ACA+
Sbjct: 441 NVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSE 500
Query: 223 SGILGKQLHA-AVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLI 281
S ++G+ +H+ A NH SN+ V ++++ MY +C SEA + F M +K+ ++W +I
Sbjct: 501 SLLIGRSIHSIAKKNHAL-SNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMI 559
Query: 282 AGF 284
G+
Sbjct: 560 MGY 562
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 97/181 (53%), Gaps = 2/181 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ + L+ Y G ++A + ++ RDVV+WTAMI+G +S H S A M+++G
Sbjct: 422 IGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEG 481
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
V PN FT S+ LKAC +L G H +A K A S+++V +AL+ MYA C +
Sbjct: 482 VEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHAL-SNVFVGSALIHMYAKC-GFVSE 539
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
A VF+ + KN VSW +I GY G L++ +M E E+ + F+ +S C
Sbjct: 540 AFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGD 599
Query: 221 V 221
+
Sbjct: 600 I 600
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 131/263 (49%), Gaps = 13/263 (4%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
+LI S G + A +FD M ++ V WTAMI GY A+ +F ++ G+R
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR 180
Query: 103 -PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRA 161
N +L C G HG VK+G ++ V+++L+ YA C + + A
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV--GNLIVESSLVYFYAQCGE-LTSA 237
Query: 162 RMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASV 221
F+ + K+ +SWT +I+ + +G + +F M+ + F+ + AC+
Sbjct: 238 LRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEE 297
Query: 222 GSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLI 281
+ G+Q+H+ V+ ++++ V S++DMY +C S+ ++ F M+ ++T+TW ++I
Sbjct: 298 KALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSII 357
Query: 282 A-----GFETLDSKESLCIFSLM 299
A GF +E++ +F +M
Sbjct: 358 AAHAREGF----GEEAISLFRIM 376
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 132/272 (48%), Gaps = 32/272 (11%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
LI Y + G + E+ LFD ++R V+ W +MI+GY + N A +F M R+ R +
Sbjct: 259 LISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM-RNETRED 317
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATC---------- 154
+ TL+AV+ AC GL L G+ H A K G I V + L+DMY+ C
Sbjct: 318 SRTLAAVINACIGLGFLETGKQMHCHACKFGLI-DDIVVASTLLDMYSKCGSPMEACKLF 376
Query: 155 --------------------CDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLR 194
C +D A+ VFE I K+ +SW ++ G++ G L
Sbjct: 377 SEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLE 436
Query: 195 VFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYC 254
F QM + S S +SACAS+ S LG+Q+ A G S+ V +S++D+YC
Sbjct: 437 YFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYC 496
Query: 255 RCRCASEAKQFFCEMTQKDTITWNTLIAGFET 286
+C ++ F M + D + WN++I+G+ T
Sbjct: 497 KCGFVEHGRRVFDTMVKSDEVPWNSMISGYAT 528
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 123/247 (49%), Gaps = 4/247 (1%)
Query: 39 TGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLR 98
T L +IK YF G I +A +F+ + ++ +++W +M G++ + F +M +
Sbjct: 384 TILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHK 443
Query: 99 DGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSM 158
+ + +LS+V+ AC + +L GE A +G + V ++L+D+Y C +
Sbjct: 444 LDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQV-VSSSLIDLYCK-CGFV 501
Query: 159 DRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSAC 218
+ R VF+ +V + V W ++I+GY G F + +F++M + + +F + ++AC
Sbjct: 502 EHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTAC 561
Query: 219 ASVGSGILGKQLHAAV-INHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT-QKDTIT 276
G G++L ++ ++HGF + + ++D+ R EA EM D
Sbjct: 562 NYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSM 621
Query: 277 WNTLIAG 283
W++++ G
Sbjct: 622 WSSILRG 628
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 125/273 (45%), Gaps = 36/273 (13%)
Query: 40 GLTTDLIKSYFDK-GSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLR 98
G + +++ S F K G + A LF+ M +DVV +++ GY + A ++F +
Sbjct: 124 GYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL-- 181
Query: 99 DGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATC---- 154
+A TL+ VLKAC L AL CG+ H + IG ++++L+++YA C
Sbjct: 182 -NFSADAITLTTVLKACAELEALKCGKQIHA-QILIGGVECDSKMNSSLVNVYAKCGDLR 239
Query: 155 --------------------------CDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGD 188
C ++ +R +F+ + + W ++I+GY
Sbjct: 240 MASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNM 299
Query: 189 AFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNS 248
L +F +M E E S + + ++AC +G GKQ+H G ++ V ++
Sbjct: 300 KMEALVLFNEMRNETREDSR-TLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVAST 358
Query: 249 ILDMYCRCRCASEAKQFFCEMTQKDTITWNTLI 281
+LDMY +C EA + F E+ DTI N++I
Sbjct: 359 LLDMYSKCGSPMEACKLFSEVESYDTILLNSMI 391
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 101/241 (41%), Gaps = 46/241 (19%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRM-LRDGVRP 103
L++ Y G + A LFDEM R+ +W MI GY + + + F M RDG
Sbjct: 68 LLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSW 127
Query: 104 NAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARM 163
N +S KA GEL+ AR
Sbjct: 128 NV-VVSGFAKA---------GELS--------------------------------VARR 145
Query: 164 VFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGS 223
+F + K+ V+ +L+ GY G A LR+F+++ + + + ACA + +
Sbjct: 146 LFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSA---DAITLTTVLKACAELEA 202
Query: 224 GILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAG 283
GKQ+HA ++ G + + + +S++++Y +C A ++ + D + + LI+G
Sbjct: 203 LKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISG 262
Query: 284 F 284
+
Sbjct: 263 Y 263
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 81/163 (49%), Gaps = 10/163 (6%)
Query: 128 HGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRG 187
+GL +K G S + V N L+ MY+ M AR +F+++ +N SW T+I GY + G
Sbjct: 49 NGLLLKKGFLSSIVIVANHLLQMYSR-SGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSG 107
Query: 188 DAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMN 247
+ LR F M +G +S+++ VS A G + ++L A+ + ++ +N
Sbjct: 108 EKGTSLRFFDMMPERDG----YSWNVVVSGFAKAGELSVARRLFNAMP----EKDVVTLN 159
Query: 248 SILDMYCRCRCASEAKQFFCEMT-QKDTITWNTLIAGFETLDS 289
S+L Y A EA + F E+ D IT T++ L++
Sbjct: 160 SLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKACAELEA 202
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 48/109 (44%), Gaps = 11/109 (10%)
Query: 27 QLNDSPFRPKDLTGLTTD------LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGY 80
+L + F + GL +D LI Y G ++ +FD M D V W +MI+GY
Sbjct: 467 ELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGY 526
Query: 81 TSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHG 129
+ A +F +M G+RP T VL AC +CG + G
Sbjct: 527 ATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACN-----YCGLVEEG 570
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 153/275 (55%), Gaps = 10/275 (3%)
Query: 13 DFRPAPSVVLHHRTQLNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVA 72
++R SV T++ DS F+P ++T ++ ++ + F G ++ +F + V A
Sbjct: 328 EYRSDKSV--EFLTRMRDSGFQPNEVTCIS--VLGACFRSGDVETGRRIFSSIPQPSVSA 383
Query: 73 WTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAV 132
W AM++GY++ H+ A F +M ++P+ TLS +L +C LR L G+ HG+ +
Sbjct: 384 WNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVI 443
Query: 133 KIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVS-WTTLITGYTHRGDAFG 191
+ +S ++ + L+ +Y+ C + M+ + +F+D + + ++ W ++I+G+ H
Sbjct: 444 RTEISKNS-HIVSGLIAVYSEC-EKMEISECIFDDCINELDIACWNSMISGFRHNMLDTK 501
Query: 192 GLRVFRQMVLEEGELSP--FSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSI 249
L +FR+M + L P SF+ +S+C+ + S + G+Q H V+ G+ S+ V ++
Sbjct: 502 ALILFRRM-HQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETAL 560
Query: 250 LDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
DMYC+C A+QFF + +K+T+ WN +I G+
Sbjct: 561 TDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGY 595
Score = 134 bits (336), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 130/242 (53%), Gaps = 12/242 (4%)
Query: 53 GSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVL 112
G + EA +FD M RDVV+W MI+ +A V+ RM+ DG P+ FTL++VL
Sbjct: 86 GDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVL 145
Query: 113 KAC-KGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTK 171
AC K L +F G HG+AVK G +I+V NAL+ MYA C +D VFE +
Sbjct: 146 SACSKVLDGVF-GMRCHGVAVKTGL-DKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203
Query: 172 NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFS--IAVSA----CASVGS-- 223
N VS+T +I G +++FR M + ++ S +++SA C S+
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIY 263
Query: 224 -GILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIA 282
LGKQ+H + GF +L + NS+L++Y + + + A+ F EM + + ++WN +I
Sbjct: 264 GNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIV 323
Query: 283 GF 284
GF
Sbjct: 324 GF 325
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 122/247 (49%), Gaps = 8/247 (3%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDE-MTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRD 99
+ + LI Y + ++ + +FD+ + D+ W +MI+G+ ++A +F RM +
Sbjct: 453 IVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQT 512
Query: 100 GVR-PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSM 158
V PN + + VL +C L +L G HGL VK G S +V+ AL DMY C + +
Sbjct: 513 AVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDS-FVETALTDMYCKCGE-I 570
Query: 159 DRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSAC 218
D AR F+ ++ KN V W +I GY H G + ++R+M+ + +F ++AC
Sbjct: 571 DSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTAC 630
Query: 219 ASVGSGILGKQLHAAVIN-HGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT--QKDTI 275
+ G G ++ +++ HG + L I+D R +A++ E T + ++
Sbjct: 631 SHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEK-LAEATPYKSSSV 689
Query: 276 TWNTLIA 282
W L++
Sbjct: 690 LWEILLS 696
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 35/225 (15%)
Query: 108 LSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFED 167
L+++L+ + R G++ HG V++G + S Y+ N L+D+Y C D D AR VF++
Sbjct: 9 LASLLRCYRDERCKLSGKVIHGFIVRMGMK-SDTYLCNRLLDLYIECGDG-DYARKVFDE 66
Query: 168 IVTKNAVSWTTLITGYTHRGD------AFGG-------------------------LRVF 196
+ ++ SW +T GD F G L V+
Sbjct: 67 MSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVY 126
Query: 197 RQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRC 256
++MV + S F+ + +SAC+ V G+ G + H + G N+ V N++L MY +C
Sbjct: 127 KRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKC 186
Query: 257 R-CASEAKQFFCEMTQKDTITWNTLIAGFETLDSK-ESLCIFSLM 299
+ F ++Q + +++ +I G + E++ +F LM
Sbjct: 187 GFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLM 231
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 125/231 (54%), Gaps = 6/231 (2%)
Query: 58 AHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKG 117
A+ +FD M R+VV+W+A+++G+ + +F M R G+ PN FT S LKAC
Sbjct: 60 AYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGL 119
Query: 118 LRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWT 177
L AL G HG +KIG + V N+L+DMY+ C ++ A VF IV ++ +SW
Sbjct: 120 LNALEKGLQIHGFCLKIGFE-MMVEVGNSLVDMYSK-CGRINEAEKVFRRIVDRSLISWN 177
Query: 178 TLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA--VSACASVGSGILGKQLHAAVI 235
+I G+ H G L F M + P F++ + AC+S G GKQ+H ++
Sbjct: 178 AMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLV 237
Query: 236 NHGFQ--SNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
GF S+ + S++D+Y +C A++ F ++ +K I+W++LI G+
Sbjct: 238 RSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGY 288
Score = 137 bits (345), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 131/262 (50%), Gaps = 5/262 (1%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGV- 101
L+ Y G I EA +F + R +++W AMI G+ + S+A F M +
Sbjct: 146 NSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIK 205
Query: 102 -RPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGAR-GSSIYVDNALMDMYATCCDSMD 159
RP+ FTL+++LKAC ++ G+ HG V+ G SS + +L+D+Y C +
Sbjct: 206 ERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKC-GYLF 264
Query: 160 RARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACA 219
AR F+ I K +SW++LI GY G+ + +F+++ ++ F+ S + A
Sbjct: 265 SARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFA 324
Query: 220 SVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNT 279
GKQ+ A + V+NS++DMY +C EA++ F EM KD I+W
Sbjct: 325 DFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTV 384
Query: 280 LIAGFETLD-SKESLCIFSLMV 300
+I G+ K+S+ IF M+
Sbjct: 385 VITGYGKHGLGKKSVRIFYEML 406
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 98/180 (54%), Gaps = 6/180 (3%)
Query: 107 TLSAVLKAC--KGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
L ++L+ C KGL G H +K G+ G ++ N L+DMY C + + A V
Sbjct: 8 NLVSILRVCTRKGLSDQ--GGQVHCYLLKSGS-GLNLITSNYLIDMYCKCREPL-MAYKV 63
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
F+ + +N VSW+ L++G+ GD G L +F +M + + F+FS + AC + +
Sbjct: 64 FDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNAL 123
Query: 225 ILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
G Q+H + GF+ + V NS++DMY +C +EA++ F + + I+WN +IAGF
Sbjct: 124 EKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGF 183
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 116/244 (47%), Gaps = 4/244 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+T L+ Y G + A FD++ + +++W+++I GY A +F R+
Sbjct: 249 ITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELN 308
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
+ ++F LS+++ L G+ LAVK+ + G V N+++DMY C +D
Sbjct: 309 SQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPS-GLETSVLNSVVDMYLKC-GLVDE 366
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
A F ++ K+ +SWT +ITGY G +R+F +M+ E + +SAC+
Sbjct: 367 AEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSH 426
Query: 221 VGSGILGKQLHAAVIN-HGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTI-TWN 278
G G++L + ++ HG + + ++D+ R EAK M K + W
Sbjct: 427 SGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQ 486
Query: 279 TLIA 282
TL++
Sbjct: 487 TLLS 490
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 39 TGLTTDLIKS----YFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFP 94
+GL T ++ S Y G + EA F EM +DV++WT +ITGY ++ ++F
Sbjct: 344 SGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFY 403
Query: 95 RMLRDGVRPNAFTLSAVLKAC 115
MLR + P+ AVL AC
Sbjct: 404 EMLRHNIEPDEVCYLAVLSAC 424
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/264 (34%), Positives = 136/264 (51%), Gaps = 7/264 (2%)
Query: 39 TGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLR 98
T L T L+ Y +++A + DEM ++VV+WTAMI+ Y+ H S A VF M+R
Sbjct: 87 TYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMR 146
Query: 99 DGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSM 158
+PN FT + VL +C L G+ HGL VK S I+V ++L+DMYA +
Sbjct: 147 SDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNY-DSHIFVGSSLLDMYAK-AGQI 204
Query: 159 DRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSAC 218
AR +FE + ++ VS T +I GY G L +F ++ E +SP + A
Sbjct: 205 KEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSE--GMSPNYVTYASLLT 262
Query: 219 ASVGSGIL--GKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTIT 276
A G +L GKQ H V+ + NS++DMY +C S A++ F M ++ I+
Sbjct: 263 ALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAIS 322
Query: 277 WNTLIAGFETLD-SKESLCIFSLM 299
WN ++ G+ +E L +F LM
Sbjct: 323 WNAMLVGYSKHGLGREVLELFRLM 346
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 105/188 (55%), Gaps = 3/188 (1%)
Query: 110 AVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIV 169
A+L AC RAL G+ H +K ++ Y+ L+ Y C D ++ AR V +++
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPAT-YLRTRLLIFYGKC-DCLEDARKVLDEMP 114
Query: 170 TKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQ 229
KN VSWT +I+ Y+ G + L VF +M+ +G+ + F+F+ +++C LGKQ
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQ 174
Query: 230 LHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLD- 288
+H ++ + S++ V +S+LDMY + EA++ F + ++D ++ +IAG+ L
Sbjct: 175 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGL 234
Query: 289 SKESLCIF 296
+E+L +F
Sbjct: 235 DEEALEMF 242
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 51/112 (45%), Gaps = 9/112 (8%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L LI Y G++ A LFD M R ++W AM+ GY+ ++F R++RD
Sbjct: 291 LQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELF-RLMRDE 349
Query: 101 --VRPNAFTLSAVLKACKGLRA------LFCGELAHGLAVKIGARGSSIYVD 144
V+P+A TL AVL C R +F G +A K G VD
Sbjct: 350 KRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVD 401
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 122/229 (53%), Gaps = 2/229 (0%)
Query: 55 IQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKA 114
I +F+ M +DVV++ +I GY + A ++ M ++P++FTLS+VL
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI 251
Query: 115 CKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAV 174
+ G+ HG ++ G S +Y+ ++L+DMYA D R VF + ++ +
Sbjct: 252 FSEYVDVIKGKEIHGYVIRKGI-DSDVYIGSSLVDMYAKSARIEDSER-VFSRLYCRDGI 309
Query: 175 SWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAV 234
SW +L+ GY G LR+FRQMV + + +FS + ACA + + LGKQLH V
Sbjct: 310 SWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYV 369
Query: 235 INHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAG 283
+ GF SN+ + ++++DMY +C A++ F M D ++W +I G
Sbjct: 370 LRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMG 418
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 144/312 (46%), Gaps = 38/312 (12%)
Query: 27 QLNDSPFRPKDLTGLTTDLIKS-YFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNH 85
QL+ R + L+ + ++ S Y + + EA LF + V+AW ++I +T +
Sbjct: 26 QLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSL 85
Query: 86 HSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDN 145
S+A F M G P+ +VLK+C + L GE HG V++G +Y N
Sbjct: 86 FSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGM-DCDLYTGN 144
Query: 146 ALMDMYA---------------------------------TCCD--SMDRARMVFEDIVT 170
ALM+MYA TC +D R VFE +
Sbjct: 145 ALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPR 204
Query: 171 KNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQL 230
K+ VS+ T+I GY G LR+ R+M + + F+ S + + I GK++
Sbjct: 205 KDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEI 264
Query: 231 HAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF-ETLDS 289
H VI G S++ + +S++DMY + ++++ F + +D I+WN+L+AG+ +
Sbjct: 265 HGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRY 324
Query: 290 KESLCIFSLMVS 301
E+L +F MV+
Sbjct: 325 NEALRLFRQMVT 336
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 124/244 (50%), Gaps = 4/244 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ + L+ Y I+++ +F + RD ++W +++ GY ++ A ++F +M+
Sbjct: 279 IGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAK 338
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
V+P A S+V+ AC L L G+ HG ++ G GS+I++ +AL+DMY+ C + +
Sbjct: 339 VKPGAVAFSSVIPACAHLATLHLGKQLHGYVLR-GGFGSNIFIASALVDMYSKCGN-IKA 396
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
AR +F+ + + VSWT +I G+ G + +F +M + + + +F ++AC+
Sbjct: 397 ARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSH 456
Query: 221 VG-SGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTIT-WN 278
VG ++ +G L ++ D+ R EA F +M + T + W+
Sbjct: 457 VGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWS 516
Query: 279 TLIA 282
TL++
Sbjct: 517 TLLS 520
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 145/263 (55%), Gaps = 8/263 (3%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKV---FPRMLRDGV 101
L+ Y G + +AH++F+ + +DVV+W ++ITGY+ S ++ V F M +
Sbjct: 55 LVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDI 114
Query: 102 RPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRA 161
PNA+TL+ + KA L++ G AH L VK+ + G IYVD +L+ MY D
Sbjct: 115 LPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGD-IYVDTSLVGMYCKAGLVEDGL 173
Query: 162 RMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMV--LEEGELSPFSFSIAVSACA 219
+ VF + +N +W+T+++GY RG ++VF + EEG S + F+ +S+ A
Sbjct: 174 K-VFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLA 232
Query: 220 SVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNT 279
+ LG+Q+H I +G + + N+++ MY +C +EA + F +++ITW+
Sbjct: 233 ATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSA 292
Query: 280 LIAGF-ETLDSKESLCIFSLMVS 301
++ G+ + +S E++ +FS M S
Sbjct: 293 MVTGYSQNGESLEAVKLFSRMFS 315
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 136/264 (51%), Gaps = 7/264 (2%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L+ L+ Y S+ EA +FD R+ + W+AM+TGY+ A K+F RM G
Sbjct: 258 LSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAG 317
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
++P+ +T+ VL AC + L G+ H +K+G ++ AL+DMYA +
Sbjct: 318 IKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFE-RHLFATTALVDMYAK-AGCLAD 375
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA--VSAC 218
AR F+ + ++ WT+LI+GY D L ++R+M + + P ++A + AC
Sbjct: 376 ARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRM--KTAGIIPNDPTMASVLKAC 433
Query: 219 ASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWN 278
+S+ + LGKQ+H I HGF +P+ +++ MY +C + F KD ++WN
Sbjct: 434 SSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWN 493
Query: 279 TLIAGF-ETLDSKESLCIFSLMVS 301
+I+G E+L +F M++
Sbjct: 494 AMISGLSHNGQGDEALELFEEMLA 517
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 141/260 (54%), Gaps = 5/260 (1%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
T L+ Y G +++ +F M R+ W+ M++GY + A KVF LR+
Sbjct: 157 TSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEE 216
Query: 103 --PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
+ + +AVL + + G H + +K G G + + NAL+ MY+ C+S++
Sbjct: 217 GSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLG-FVALSNALVTMYSK-CESLNE 274
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
A +F+ +N+++W+ ++TGY+ G++ +++F +M + S ++ ++AC+
Sbjct: 275 ACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSD 334
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTL 280
+ GKQLH+ ++ GF+ +L +++DMY + C ++A++ F + ++D W +L
Sbjct: 335 ICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSL 394
Query: 281 IAGF-ETLDSKESLCIFSLM 299
I+G+ + D++E+L ++ M
Sbjct: 395 ISGYVQNSDNEEALILYRRM 414
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 96/181 (53%), Gaps = 2/181 (1%)
Query: 42 TTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGV 101
TT L+ Y G + +A FD + RDV WT++I+GY + + A ++ RM G+
Sbjct: 360 TTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGI 419
Query: 102 RPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRA 161
PN T+++VLKAC L L G+ HG +K G G + + +AL MY+ C S++
Sbjct: 420 IPNDPTMASVLKACSSLATLELGKQVHGHTIKHGF-GLEVPIGSALSTMYSK-CGSLEDG 477
Query: 162 RMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASV 221
+VF K+ VSW +I+G +H G L +F +M+ E E +F +SAC+
Sbjct: 478 NLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHK 537
Query: 222 G 222
G
Sbjct: 538 G 538
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 111/211 (52%), Gaps = 6/211 (2%)
Query: 94 PRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYAT 153
P + + P+ TL L R L G HG ++ GA + I N L++ YA
Sbjct: 3 PSTFQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGA-STCIQHANVLVNFYAK 61
Query: 154 CCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRG---DAFGGLRVFRQMVLEEGELSPFS 210
C + +A +F I+ K+ VSW +LITGY+ G ++ +++FR+M ++ + ++
Sbjct: 62 C-GKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYT 120
Query: 211 FSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT 270
+ A +S+ S +G+Q HA V+ ++ V S++ MYC+ + + F M
Sbjct: 121 LAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP 180
Query: 271 QKDTITWNTLIAGFETLDS-KESLCIFSLMV 300
+++T TW+T+++G+ T +E++ +F+L +
Sbjct: 181 ERNTYTWSTMVSGYATRGRVEEAIKVFNLFL 211
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 129/245 (52%), Gaps = 10/245 (4%)
Query: 42 TTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGV 101
T + S+ D G+ AH +F+ + +D+V W MI+ Y A V+ RM GV
Sbjct: 329 TMTMYSSFEDFGA---AHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGV 385
Query: 102 RPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRA 161
+P+ FT ++L L L E+ +K G S I + NAL+ Y+ +++A
Sbjct: 386 KPDEFTFGSLLATSLDLDVL---EMVQACIIKFGL-SSKIEISNALISAYSKN-GQIEKA 440
Query: 162 RMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAVSACA 219
++FE + KN +SW +I+G+ H G F GL F ++ E + P ++ S +S C
Sbjct: 441 DLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICV 500
Query: 220 SVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNT 279
S S +LG Q HA V+ HG + N++++MY +C + + F +M++KD ++WN+
Sbjct: 501 STSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNS 560
Query: 280 LIAGF 284
LI+ +
Sbjct: 561 LISAY 565
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 125/247 (50%), Gaps = 14/247 (5%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVA-WTAMITGYTSCNHHSRAWKVFPRMLRDGV 101
T L+ + F G I+ A +FD+M RD VA W AMITG +H + ++F M + GV
Sbjct: 127 TTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGV 186
Query: 102 RPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRA 161
R + F + +L C +L G+ H L +K G +S V NAL+ MY C +D A
Sbjct: 187 RHDKFGFATILSMCD-YGSLDFGKQVHSLVIKAGFFIASSVV-NALITMYFNCQVVVD-A 243
Query: 162 RMVFE--DIVTKNAVSWTTLITGYT--HRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSA 217
+VFE D+ ++ V++ +I G R ++ L VFR+M+ E L P + VS
Sbjct: 244 CLVFEETDVAVRDQVTFNVVIDGLAGFKRDES---LLVFRKML--EASLRPTDLTF-VSV 297
Query: 218 CASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITW 277
S +G Q+H I G++ V N+ + MY A + F + +KD +TW
Sbjct: 298 MGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTW 357
Query: 278 NTLIAGF 284
NT+I+ +
Sbjct: 358 NTMISSY 364
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 111/259 (42%), Gaps = 38/259 (14%)
Query: 77 ITGYTSCNHHSRAWKVFPRMLR-DGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIG 135
+TG T + A K+F + R +RP+ +++S + + LR G H A++ G
Sbjct: 28 LTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSG 87
Query: 136 ARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRV 195
S +V N L+ +Y + + + F++I + SWTTL++ GD V
Sbjct: 88 LLCHS-HVSNTLLSLYERLGN-LASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEV 145
Query: 196 FRQM---------------VLEEG------EL-----------SPFSFSIAVSACASVGS 223
F +M E G EL F F+ +S C GS
Sbjct: 146 FDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMC-DYGS 204
Query: 224 GILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCE--MTQKDTITWNTLI 281
GKQ+H+ VI GF V+N+++ MY C+ +A F E + +D +T+N +I
Sbjct: 205 LDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVI 264
Query: 282 AGFETLDSKESLCIFSLMV 300
G ESL +F M+
Sbjct: 265 DGLAGFKRDESLLVFRKML 283
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG-VRP 103
LI Y G+IQ + +F++M+ +DVV+W ++I+ Y+ A + M +G V P
Sbjct: 530 LINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIP 589
Query: 104 NAFTLSAVLKAC 115
+A T SAVL AC
Sbjct: 590 DAATFSAVLSAC 601
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 126/234 (53%), Gaps = 3/234 (1%)
Query: 53 GSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLR-DGVRPNAFTLSAV 111
G++ +A +F +M+ R++ +W ++ GY + A ++ RML GV+P+ +T V
Sbjct: 143 GNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCV 202
Query: 112 LKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTK 171
L+ C G+ L G+ H V+ G I V NAL+ MY C D + AR++F+ + +
Sbjct: 203 LRTCGGIPDLARGKEVHVHVVRYGYE-LDIDVVNALITMYVKCGD-VKSARLLFDRMPRR 260
Query: 172 NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLH 231
+ +SW +I+GY G GL +F M + + + +SAC +G LG+ +H
Sbjct: 261 DIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIH 320
Query: 232 AAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFE 285
A VI GF ++ V NS+ MY EA++ F M +KD ++W T+I+G+E
Sbjct: 321 AYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYE 374
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 139/256 (54%), Gaps = 18/256 (7%)
Query: 39 TGLTTD------LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKV 92
TG D L + Y + GS +EA LF M +D+V+WT MI+GY +A
Sbjct: 326 TGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDT 385
Query: 93 FPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARG-SSIYVDNALMDMY 151
+ M +D V+P+ T++AVL AC L L G H LA+K AR S + V N L++MY
Sbjct: 386 YRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIK--ARLISYVIVANNLINMY 443
Query: 152 ATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--F 209
+ C +D+A +F +I KN +SWT++I G F L RQM + L P
Sbjct: 444 SKC-KCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT---LQPNAI 499
Query: 210 SFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRC-RCASEAKQFFCE 268
+ + A++ACA +G+ + GK++HA V+ G + + N++LDMY RC R + QF +
Sbjct: 500 TLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ 559
Query: 269 MTQKDTITWNTLIAGF 284
+KD +WN L+ G+
Sbjct: 560 --KKDVTSWNILLTGY 573
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 119/240 (49%), Gaps = 2/240 (0%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
LI Y G ++ A LFD M RD+++W AMI+GY ++F M V P+
Sbjct: 237 LITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPD 296
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
TL++V+ AC+ L G H + G I V N+L MY S A +
Sbjct: 297 LMTLTSVISACELLGDRRLGRDIHAYVITTGF-AVDISVCNSLTQMYLNA-GSWREAEKL 354
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
F + K+ VSWTT+I+GY + + +R M + + + + +SACA++G
Sbjct: 355 FSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDL 414
Query: 225 ILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
G +LH I S + V N++++MY +C+C +A F + +K+ I+W ++IAG
Sbjct: 415 DTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGL 474
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 112/242 (46%), Gaps = 5/242 (2%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ +LI Y I +A +F + ++V++WT++I G N A +F R ++
Sbjct: 435 VANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMT 493
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
++PNA TL+A L AC + AL CG+ H ++ G G ++ NAL+DMY C M+
Sbjct: 494 LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGV-GLDDFLPNALLDMYVRC-GRMNT 551
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
A F K+ SW L+TGY+ RG + +F +MV +F + C+
Sbjct: 552 AWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSK 610
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM-TQKDTITWNT 279
G + + ++G NL ++D+ R EA +F +M D W
Sbjct: 611 SQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGA 670
Query: 280 LI 281
L+
Sbjct: 671 LL 672
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 128/240 (53%), Gaps = 2/240 (0%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
LI Y +G ++ A LFD ++ RDVV+WTAMI+ ++ C +H A +F M R+ V+ N
Sbjct: 53 LIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKAN 112
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
FT +VLK+CK L L G HG +V+ G ++ V +AL+ +YA C M+ AR+
Sbjct: 113 QFTYGSVLKSCKDLGCLKEGMQIHG-SVEKGNCAGNLIVRSALLSLYAR-CGKMEEARLQ 170
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
F+ + ++ VSW +I GYT A +F+ M+ E + F+F + A V
Sbjct: 171 FDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCL 230
Query: 225 ILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
+ +LH I GF + ++ S+++ Y +C + A + ++D ++ LI GF
Sbjct: 231 EIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGF 290
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 133/245 (54%), Gaps = 10/245 (4%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
L+ Y G ++EA FD M RD+V+W AMI GYT+ ++ +F ML +G +P+
Sbjct: 154 LLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPD 213
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
FT ++L+A ++ L HGLA+K+G SS + +L++ Y C S+ A +
Sbjct: 214 CFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALI-RSLVNAYVKC-GSLANAWKL 271
Query: 165 FEDIVTKNAVSWTTLITGYTHRG----DAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
E ++ +S T LITG++ + DAF +F+ M+ + ++ S + C +
Sbjct: 272 HEGTKKRDLLSCTALITGFSQQNNCTSDAFD---IFKDMIRMKTKMDEVVVSSMLKICTT 328
Query: 221 VGSGILGKQLHA-AVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNT 279
+ S +G+Q+H A+ + + ++ + NS++DMY + +A F EM +KD +W +
Sbjct: 329 IASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTS 388
Query: 280 LIAGF 284
LIAG+
Sbjct: 389 LIAGY 393
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 120/226 (53%), Gaps = 3/226 (1%)
Query: 39 TGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNH-HSRAWKVFPRML 97
+ L L+ +Y GS+ A L + RD+++ TA+ITG++ N+ S A+ +F M+
Sbjct: 249 SALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMI 308
Query: 98 RDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDS 157
R + + +S++LK C + ++ G HG A+K + + N+L+DMYA +
Sbjct: 309 RMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEI 368
Query: 158 MDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSA 217
D A + FE++ K+ SWT+LI GY G+ + ++ +M E + + +F +SA
Sbjct: 369 ED-AVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSA 427
Query: 218 CASVGSGILGKQLHAAVIN-HGFQSNLPVMNSILDMYCRCRCASEA 262
C+ G LG +++ +IN HG ++ ++ I+DM R EA
Sbjct: 428 CSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEA 473
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 135/258 (52%), Gaps = 4/258 (1%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLR-DGVRP 103
++ Y + G ++EA LFDEMT +D +WTAM+TGY + A ++ M R RP
Sbjct: 157 MVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRP 216
Query: 104 NAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARM 163
N FT+S + A ++ + G+ HG V+ G + + ++LMDMY C +D AR
Sbjct: 217 NIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEV-LWSSLMDMYGKC-GCIDEARN 274
Query: 164 VFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGS 223
+F+ IV K+ VSWT++I Y G +F ++V + ++F+ ++ACA + +
Sbjct: 275 IFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTT 334
Query: 224 GILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAG 283
LGKQ+H + GF +S++DMY +C AK + D ++W +LI G
Sbjct: 335 EELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGG 394
Query: 284 -FETLDSKESLCIFSLMV 300
+ E+L F L++
Sbjct: 395 CAQNGQPDEALKYFDLLL 412
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 112/248 (45%), Gaps = 4/248 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L + L+ Y G I EA +FD++ +DVV+WT+MI Y + + +F ++
Sbjct: 255 LWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSC 314
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
RPN +T + VL AC L G+ HG ++G S + ++L+DMY T C +++
Sbjct: 315 ERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYS-FASSSLVDMY-TKCGNIES 372
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
A+ V + + VSWT+LI G G L+ F ++ + +F +SAC
Sbjct: 373 AKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTH 432
Query: 221 VGSGILGKQLHAAVIN-HGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDT-ITWN 278
G G + ++ H ++D+ R + K EM K + W
Sbjct: 433 AGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWA 492
Query: 279 TLIAGFET 286
+++ G T
Sbjct: 493 SVLGGCST 500
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 188 DAFGGLRVFRQMV--LEEGELSPFS-FSIAVSACASVGSGILGKQLHAAVINHGFQSNLP 244
D G ++ R+ V L + P S + + C+ + GK++H + GF +
Sbjct: 62 DVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIV 121
Query: 245 VMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
+ N +L MY +C +A++ F EM +D +WN ++ G+
Sbjct: 122 IWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGY 161
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 131/255 (51%), Gaps = 11/255 (4%)
Query: 39 TGLTTDLIKSYFD-------KGSIQEAHTLFDEMTHRDVVAWTAMITGY-TSCNHHSRAW 90
+GL D+ S D GS+ + +FD M V++WTA+ITGY +CN + A
Sbjct: 298 SGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAI 357
Query: 91 KVFPRMLRDG-VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMD 149
+F M+ G V PN FT S+ KAC L G+ G A K G +S V N+++
Sbjct: 358 NLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNS-SVANSVIS 416
Query: 150 MYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPF 209
M+ D M+ A+ FE + KN VS+ T + G + ++ ++ E +S F
Sbjct: 417 MFVKS-DRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAF 475
Query: 210 SFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM 269
+F+ +S A+VGS G+Q+H+ V+ G N PV N+++ MY +C A + F M
Sbjct: 476 TFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFM 535
Query: 270 TQKDTITWNTLIAGF 284
++ I+W ++I GF
Sbjct: 536 ENRNVISWTSMITGF 550
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 130/269 (48%), Gaps = 10/269 (3%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTH---RDVVAWTAMITGYTSCNHHSRAWKVFPRML 97
L LI Y G +A +F+ M RDVV+W+AM+ Y + A KVF L
Sbjct: 99 LYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFL 158
Query: 98 RDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDS 157
G+ PN + +AV++AC + G + G +K G S + V +L+DM+ +S
Sbjct: 159 ELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENS 218
Query: 158 MDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSA 217
+ A VF+ + N V+WT +IT G +R F MVL E F+ S SA
Sbjct: 219 FENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSA 278
Query: 218 CASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRC---ASEAKQFFCEMTQKDT 274
CA + + LGKQLH+ I G ++ S++DMY +C + ++ F M
Sbjct: 279 CAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSV 336
Query: 275 ITWNTLIAGF--ETLDSKESLCIFSLMVS 301
++W LI G+ + E++ +FS M++
Sbjct: 337 MSWTALITGYMKNCNLATEAINLFSEMIT 365
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 121/247 (48%), Gaps = 4/247 (1%)
Query: 39 TGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLR 98
+ + +I + +++A F+ ++ +++V++ + G + +A+K+ +
Sbjct: 408 SSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITE 467
Query: 99 DGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSM 158
+ +AFT +++L + ++ GE H VK+G + V NAL+ MY+ C S+
Sbjct: 468 RELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQP-VCNALISMYSKC-GSI 525
Query: 159 DRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSAC 218
D A VF + +N +SWT++ITG+ G A L F QM+ E + + ++ +SAC
Sbjct: 526 DTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSAC 585
Query: 219 ASVGSGILG-KQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT-QKDTIT 276
+ VG G + ++ +H + + ++D+ CR ++A +F M Q D +
Sbjct: 586 SHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLV 645
Query: 277 WNTLIAG 283
W T +
Sbjct: 646 WRTFLGA 652
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 104/194 (53%), Gaps = 12/194 (6%)
Query: 96 MLRDGVRP-NAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATC 154
M RDG+RP ++ T S++LK+C R G+L H ++ S+ N+L+ +Y+
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLY-NSLISLYSKS 110
Query: 155 CDSMDRARMVFEDIV---TKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--F 209
DS +A VFE + ++ VSW+ ++ Y + G ++VF + LE G L P +
Sbjct: 111 GDSA-KAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEF-LELG-LVPNDY 167
Query: 210 SFSIAVSACASVGSGILGKQLHAAVINHG-FQSNLPVMNSILDMYCRCRCASE-AKQFFC 267
++ + AC++ +G+ ++ G F+S++ V S++DM+ + + E A + F
Sbjct: 168 CYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFD 227
Query: 268 EMTQKDTITWNTLI 281
+M++ + +TW +I
Sbjct: 228 KMSELNVVTWTLMI 241
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 21/186 (11%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
LI Y GSI A +F+ M +R+V++WT+MITG+ R + F +M+ +GV+PN
Sbjct: 515 LISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPN 574
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNAL---MDMYATCCDSMDRA 161
T A+L AC + GL + +S+Y D+ + M+ YA D + RA
Sbjct: 575 EVTYVAILSACSHV----------GLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRA 624
Query: 162 RMV---FEDIVT----KNAVSWTTLITG-YTHRGDAFGGLRVFRQMVLEEGELSPFSFSI 213
++ FE I T + + W T + H G L + + L+ E + +
Sbjct: 625 GLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLS 684
Query: 214 AVSACA 219
+ ACA
Sbjct: 685 NIYACA 690
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 125/239 (52%), Gaps = 3/239 (1%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
L+ Y +A +FDEM RD V++ MI GY + ++F L D +P+
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQFKPD 306
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
T+S+VL+AC LR L + + +K G S V N L+D+YA C D M AR V
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLEST-VRNILIDVYAKCGD-MITARDV 364
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
F + K+ VSW ++I+GY GD +++F+ M++ E + ++ + +S +
Sbjct: 365 FNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADL 424
Query: 225 ILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAG 283
GK LH+ I G +L V N+++DMY +C ++ + F M DT+TWNT+I+
Sbjct: 425 KFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISA 483
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 122/240 (50%), Gaps = 2/240 (0%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
LI Y G + A +F+ M +D V+W ++I+GY A K+F M+ + +
Sbjct: 348 LIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQAD 407
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
T ++ L L G+ H +K G + V NAL+DMYA C + D + +
Sbjct: 408 HITYLMLISVSTRLADLKFGKGLHSNGIKSGI-CIDLSVSNALIDMYAKCGEVGDSLK-I 465
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
F + T + V+W T+I+ GD GL+V QM E +F + + CAS+ +
Sbjct: 466 FSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAK 525
Query: 225 ILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
LGK++H ++ G++S L + N++++MY +C C + + F M+++D +TW +I +
Sbjct: 526 RLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAY 585
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 139/257 (54%), Gaps = 4/257 (1%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
L+ Y G + A +FDEM RD+V+W ++I+GY+S ++ A +++ + + P+
Sbjct: 147 LVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPD 206
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
+FT+S+VL A L + G+ HG A+K G + N L+ MY D AR V
Sbjct: 207 SFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVN-NGLVAMYLKFRRPTD-ARRV 264
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
F+++ +++VS+ T+I GY +R+F + L++ + + S + AC +
Sbjct: 265 FDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLEN-LDQFKPDLLTVSSVLRACGHLRDL 323
Query: 225 ILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
L K ++ ++ GF V N ++D+Y +C A+ F M KDT++WN++I+G+
Sbjct: 324 SLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGY 383
Query: 285 -ETLDSKESLCIFSLMV 300
++ D E++ +F +M+
Sbjct: 384 IQSGDLMEAMKLFKMMM 400
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 131/233 (56%), Gaps = 9/233 (3%)
Query: 68 RDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELA 127
++V W ++I ++ A + + ++ V P+ +T +V+KAC GL G+L
Sbjct: 69 KNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLV 128
Query: 128 HGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRG 187
+ + +G S ++V NAL+DMY+ + RAR VF+++ ++ VSW +LI+GY+ G
Sbjct: 129 YEQILDMGFE-SDLFVGNALVDMYSR-MGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 188 DAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQ---LHAAVINHGFQSNLP 244
L ++ + L+ + P SF+++ S + G+ ++ KQ LH + G S +
Sbjct: 187 YYEEALEIYHE--LKNSWIVPDSFTVS-SVLPAFGNLLVVKQGQGLHGFALKSGVNSVVV 243
Query: 245 VMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLD-SKESLCIF 296
V N ++ MY + R ++A++ F EM +D++++NT+I G+ L+ +ES+ +F
Sbjct: 244 VNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF 296
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 83/161 (51%), Gaps = 5/161 (3%)
Query: 128 HGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRG 187
H L + +G SS + L+D Y+ + + KN W ++I ++ G
Sbjct: 27 HALVISLGL-DSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNG 85
Query: 188 DAFGGLRVFRQMVLEEGELSP--FSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPV 245
L + + L E ++SP ++F + ACA + +G ++ +++ GF+S+L V
Sbjct: 86 LFPEALEFYGK--LRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFV 143
Query: 246 MNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFET 286
N+++DMY R + A+Q F EM +D ++WN+LI+G+ +
Sbjct: 144 GNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSS 184
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 18/171 (10%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
LI+ Y G ++ + +F+ M+ RDVV WT MI Y +A + F M + G+ P+
Sbjct: 550 LIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPD 609
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
+ A++ AC G + GLA + + Y + +++ YA D + R++ +
Sbjct: 610 SVVFIAIIYACS-----HSGLVDEGLAC--FEKMKTHYKIDPMIEHYACVVDLLSRSQKI 662
Query: 165 --FEDI-----VTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP 208
E+ + +A W +++ GD RV R+++ EL+P
Sbjct: 663 SKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRII----ELNP 709
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 134 bits (337), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 136/261 (52%), Gaps = 3/261 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
LT+ LI +YF + A +F + DVV +TAMI+GY + + ++F +++
Sbjct: 377 LTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVK 436
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
+ PN TL ++L L AL G HG +K G + + A++DMYA C M+
Sbjct: 437 ISPNEITLVSILPVIGILLALKLGRELHGFIIKKGF-DNRCNIGCAVIDMYAKC-GRMNL 494
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
A +FE + ++ VSW ++IT + + +FRQM + S S A+SACA+
Sbjct: 495 AYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACAN 554
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTL 280
+ S GK +H +I H S++ ++++DMY +C A F M +K+ ++WN++
Sbjct: 555 LPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSI 614
Query: 281 IAGFETLDS-KESLCIFSLMV 300
IA K+SLC+F MV
Sbjct: 615 IAACGNHGKLKDSLCLFHEMV 635
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 112/246 (45%), Gaps = 6/246 (2%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ + LIK+Y + G I LFD + +D V W M+ GY C K F M D
Sbjct: 175 VASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQ 234
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGA--RGSSIYVDNALMDMYATCCDSM 158
+ PNA T VL C + G HGL V G GS + N+L+ MY+ C
Sbjct: 235 ISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGS---IKNSLLSMYSK-CGRF 290
Query: 159 DRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSAC 218
D A +F + + V+W +I+GY G L F +M+ +FS + +
Sbjct: 291 DDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSV 350
Query: 219 ASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWN 278
+ + KQ+H ++ H ++ + ++++D Y +CR S A+ F + D + +
Sbjct: 351 SKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFT 410
Query: 279 TLIAGF 284
+I+G+
Sbjct: 411 AMISGY 416
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 120/243 (49%), Gaps = 7/243 (2%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
+I Y G + A+ +F+ ++ RD+V+W +MIT ++ S A +F +M G+ +
Sbjct: 482 VIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYD 541
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
++SA L AC L + G+ HG +K + S +Y ++ L+DMYA C ++ A V
Sbjct: 542 CVSISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKC-GNLKAAMNV 599
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAVSACASVG 222
F+ + KN VSW ++I + G L +F +MV E+ + P +F +S+C VG
Sbjct: 600 FKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMV-EKSGIRPDQITFLEIISSCCHVG 658
Query: 223 SGILGKQLHAAVI-NHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT-QKDTITWNTL 280
G + ++ ++G Q ++D++ R +EA + M D W TL
Sbjct: 659 DVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTL 718
Query: 281 IAG 283
+
Sbjct: 719 LGA 721
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 120/252 (47%), Gaps = 5/252 (1%)
Query: 53 GSIQEAHTLFDEMTHR--DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSA 110
GS + +F + R + W ++I+ + ++A + +ML GV P+ T
Sbjct: 84 GSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPC 143
Query: 111 VLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVT 170
++KAC L+ + +G + +V ++L+ Y +D +F+ ++
Sbjct: 144 LVKACVALKNFKGIDFLSDTVSSLGMDCNE-FVASSLIKAYLE-YGKIDVPSKLFDRVLQ 201
Query: 171 KNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQL 230
K+ V W ++ GY G ++ F M +++ + +F +S CAS LG QL
Sbjct: 202 KDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQL 261
Query: 231 HAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF-ETLDS 289
H V+ G + NS+L MY +C +A + F M++ DT+TWN +I+G+ ++
Sbjct: 262 HGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLM 321
Query: 290 KESLCIFSLMVS 301
+ESL F M+S
Sbjct: 322 EESLTFFYEMIS 333
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 77/187 (41%), Gaps = 2/187 (1%)
Query: 108 LSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFE- 166
LS +L+AC L G+ H + G S Y D ++ MYA C D +M +
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDS-YTDERILGMYAMCGSFSDCGKMFYRL 96
Query: 167 DIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGIL 226
D+ + W ++I+ + G L + +M+ +F V AC ++ +
Sbjct: 97 DLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKG 156
Query: 227 GKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFET 286
L V + G N V +S++ Y + F + QKD + WN ++ G+
Sbjct: 157 IDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAK 216
Query: 287 LDSKESL 293
+ +S+
Sbjct: 217 CGALDSV 223
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 134 bits (336), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 125/242 (51%), Gaps = 7/242 (2%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRD-GVRP 103
L+ SY I A LFDEM +VV+WT++I+GY A +F +M D V P
Sbjct: 70 LVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPP 129
Query: 104 NAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARM 163
N +T ++V KAC L G+ H ++I +I V ++L+DMY C D ++ AR
Sbjct: 130 NEYTFASVFKACSALAESRIGKNIHA-RLEISGLRRNIVVSSSLVDMYGKCND-VETARR 187
Query: 164 VFEDIVT--KNAVSWTTLITGYTHRGDAFGGLRVFRQM--VLEEGELSPFSFSIAVSACA 219
VF+ ++ +N VSWT++IT Y + +FR L + F + +SAC+
Sbjct: 188 VFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACS 247
Query: 220 SVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNT 279
S+G GK H V G++SN V S+LDMY +C S A++ F + I++ +
Sbjct: 248 SLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTS 307
Query: 280 LI 281
+I
Sbjct: 308 MI 309
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 19/205 (9%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTH--RDVVAWTAMITGYTSCNHHSRAWKVFPRMLR 98
+++ L+ Y ++ A +FD M R+VV+WT+MIT Y A ++F R
Sbjct: 168 VSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELF-RSFN 226
Query: 99 DGV---RPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCC 155
+ R N F L++V+ AC L L G++AHGL + G S+ V +L+DMYA C
Sbjct: 227 AALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTR-GGYESNTVVATSLLDMYAKC- 284
Query: 156 DSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAV 215
S+ A +F I + +S+T++I G +++F +MV G ++P ++
Sbjct: 285 GSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMV--AGRINPNYVTLL- 341
Query: 216 SACASVGSGILGKQLHAAVINHGFQ 240
G+L H+ ++N G +
Sbjct: 342 --------GVLHACSHSGLVNEGLE 358
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 129/240 (53%), Gaps = 1/240 (0%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
L++ Y G+++ A +FDE+ R+ V W ++ GY + +++F M G+ +
Sbjct: 150 LVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALD 209
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
A TL ++KAC + A G+ HG++++ S Y+ +++DMY C +D AR +
Sbjct: 210 ALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKC-RLLDNARKL 268
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
FE V +N V WTTLI+G+ A +FRQM+ E + + + + +C+S+GS
Sbjct: 269 FETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSL 328
Query: 225 ILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
GK +H +I +G + + S +DMY RC A+ F M +++ I+W+++I F
Sbjct: 329 RHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAF 388
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 128/257 (49%), Gaps = 13/257 (5%)
Query: 36 KDLTGLTTDLIKSYFDKGSIQEAHTLFDEMT--HRDVVAWTAMITGYTSCNH--HSRAWK 91
+D L + L +Y + A + F+ + R+ +W +++GY+ +S
Sbjct: 36 EDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLL 95
Query: 92 VFPRMLR--DGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMD 149
++ RM R DGV ++F L +KAC GL L G L HGLA+K G YV +L++
Sbjct: 96 LYNRMRRHCDGV--DSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDD-YVAPSLVE 152
Query: 150 MYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPF 209
MYA +M+ A+ VF++I +N+V W L+ GY R+F M L
Sbjct: 153 MYAQ-LGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDAL 211
Query: 210 SFSIAVSACASVGSGILGKQLHAAVINHGF--QSNLPVMNSILDMYCRCRCASEAKQFFC 267
+ V AC +V +G +GK +H I F QS+ + SI+DMY +CR A++ F
Sbjct: 212 TLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDY-LQASIIDMYVKCRLLDNARKLFE 270
Query: 268 EMTQKDTITWNTLIAGF 284
++ + W TLI+GF
Sbjct: 271 TSVDRNVVMWTTLISGF 287
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 117/245 (47%), Gaps = 4/245 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L +I Y + A LF+ R+VV WT +I+G+ C A+ +F +MLR+
Sbjct: 248 LQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRES 307
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
+ PN TL+A+L +C L +L G+ HG ++ G ++ + +DMYA C ++
Sbjct: 308 ILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNF-TSFIDMYAR-CGNIQM 365
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
AR VF+ + +N +SW+++I + G L F +M + + +F +SAC+
Sbjct: 366 ARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSH 425
Query: 221 VGSGILG-KQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTIT-WN 278
G+ G KQ + ++G ++D+ R EAK F M K + W
Sbjct: 426 SGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWG 485
Query: 279 TLIAG 283
L++
Sbjct: 486 ALLSA 490
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 138/265 (52%), Gaps = 4/265 (1%)
Query: 37 DLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRM 96
D + T L+ +Y + ++ +FDEM R+VV WT +I+GY + + +F RM
Sbjct: 126 DDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRM 185
Query: 97 LRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCD 156
+G +PN+FT +A L G H + VK G +I V N+L+++Y C +
Sbjct: 186 QNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL-DKTIPVSNSLINLYLKCGN 244
Query: 157 SMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVS 216
+ +AR++F+ K+ V+W ++I+GY G L +F M L LS SF+ +
Sbjct: 245 -VRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIK 303
Query: 217 ACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT-QKDTI 275
CA++ +QLH +V+ +GF + + +++ Y +C +A + F E+ + +
Sbjct: 304 LCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVV 363
Query: 276 TWNTLIAGFETLDSK-ESLCIFSLM 299
+W +I+GF D K E++ +FS M
Sbjct: 364 SWTAMISGFLQNDGKEEAVDLFSEM 388
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 130/248 (52%), Gaps = 12/248 (4%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMT-HRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRD 99
+ T L+ +Y ++ +A LF E+ +VV+WTAMI+G+ + A +F M R
Sbjct: 332 IRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391
Query: 100 GVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD 159
GVRPN FT S +L A L + E+ H VK SS V AL+D Y ++
Sbjct: 392 GVRPNEFTYSVILTA---LPVISPSEV-HAQVVKTNYERSST-VGTALLDAYVK-LGKVE 445
Query: 160 RARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAVSA 217
A VF I K+ V+W+ ++ GY G+ +++F + L +G + P F+FS ++
Sbjct: 446 EAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGE--LTKGGIKPNEFTFSSILNV 503
Query: 218 CASVGSGI-LGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTIT 276
CA+ + + GKQ H I S+L V +++L MY + A++ F +KD ++
Sbjct: 504 CAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVS 563
Query: 277 WNTLIAGF 284
WN++I+G+
Sbjct: 564 WNSMISGY 571
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 117/230 (50%), Gaps = 2/230 (0%)
Query: 55 IQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKA 114
+ AH LFD+ RD ++ +++ G++ A ++F + R G+ + S+VLK
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 115 CKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAV 174
L G H +K G + V +L+D Y + D R VF+++ +N V
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFL-DDVSVGTSLVDTYMKGSNFKD-GRKVFDEMKERNVV 160
Query: 175 SWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAV 234
+WTTLI+GY L +F +M E + + F+F+ A+ A G G G Q+H V
Sbjct: 161 TWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVV 220
Query: 235 INHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
+ +G +PV NS++++Y +C +A+ F + K +TWN++I+G+
Sbjct: 221 VKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGY 270
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 122/243 (50%), Gaps = 5/243 (2%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
T L+ +Y G ++EA +F + +D+VAW+AM+ GY A K+F + + G++
Sbjct: 432 TALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIK 491
Query: 103 PNAFTLSAVLKACKGLRA-LFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRA 161
PN FT S++L C A + G+ HG A+K SS+ V +AL+ MYA + ++ A
Sbjct: 492 PNEFTFSSILNVCAATNASMGQGKQFHGFAIK-SRLDSSLCVSSALLTMYAKKGN-IESA 549
Query: 162 RMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASV 221
VF+ K+ VSW ++I+GY G A L VF++M + ++ +F +AC
Sbjct: 550 EEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHA 609
Query: 222 GSGILGKQLHAAVINHGFQSNLPVMNS-ILDMYCRCRCASEAKQFFCEMTQ-KDTITWNT 279
G G++ ++ + NS ++D+Y R +A + M + W T
Sbjct: 610 GLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRT 669
Query: 280 LIA 282
++A
Sbjct: 670 ILA 672
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 6/257 (2%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
++ LI Y G++++A LFD+ + VV W +MI+GY + A +F M +
Sbjct: 231 VSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNY 290
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
VR + + ++V+K C L+ L E H VK G + ALM Y+ C +D
Sbjct: 291 VRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQ-NIRTALMVAYSKCTAMLDA 349
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
R+ E N VSWT +I+G+ + +F +M + + F++S+ ++A
Sbjct: 350 LRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPV 409
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTL 280
+ ++HA V+ ++ + V ++LD Y + EA + F + KD + W+ +
Sbjct: 410 ISPS----EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAM 465
Query: 281 IAGF-ETLDSKESLCIF 296
+AG+ +T +++ ++ +F
Sbjct: 466 LAGYAQTGETEAAIKMF 482
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 71/155 (45%), Gaps = 3/155 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+++ L+ Y KG+I+ A +F +D+V+W +MI+GY +A VF M +
Sbjct: 532 VSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRK 591
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
V+ + T V AC + GE + V+ + ++ ++D+Y+ +++
Sbjct: 592 VKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSR-AGQLEK 650
Query: 161 ARMVFEDIVT-KNAVSWTTLITG-YTHRGDAFGGL 193
A V E++ + W T++ H+ G L
Sbjct: 651 AMKVIENMPNPAGSTIWRTILAACRVHKKTELGRL 685
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 134/264 (50%), Gaps = 4/264 (1%)
Query: 38 LTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRML 97
++ + ++ Y D S+ A LFDEM+ RDV++W+ +I Y K+F M+
Sbjct: 159 ISSVQNSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMV 217
Query: 98 RDG-VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCD 156
+ P+ T+++VLKAC + + G HG +++ G + ++V N+L+DMY+ D
Sbjct: 218 HEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFD 277
Query: 157 SMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVS 216
+D A VF++ +N VSW +++ G+ H L +F MV E E+ + +
Sbjct: 278 -VDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLR 336
Query: 217 ACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTIT 276
C + K +H +I G++SN ++S++D Y C +A MT KD ++
Sbjct: 337 VCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVS 396
Query: 277 WNTLIAGFETLD-SKESLCIFSLM 299
+T+I+G S E++ IF M
Sbjct: 397 CSTMISGLAHAGRSDEAISIFCHM 420
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 129/255 (50%), Gaps = 8/255 (3%)
Query: 49 YFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTL 108
Y G + FD M RD V+W ++ G F ++ G PN TL
Sbjct: 71 YMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTL 130
Query: 109 SAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDI 168
V+ AC+ L F GE HG ++ G G S V N+++ MYA DS+ AR +F+++
Sbjct: 131 VLVIHACRSL--WFDGEKIHGYVIRSGFCGIS-SVQNSILCMYAD-SDSLS-ARKLFDEM 185
Query: 169 VTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLE-EGELSPFSFSIAVSACASVGSGILG 227
++ +SW+ +I Y + GL++F++MV E + E + + + AC + +G
Sbjct: 186 SERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVG 245
Query: 228 KQLHAAVINHGFQ-SNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF-E 285
+ +H I GF +++ V NS++DMY + A + F E T ++ ++WN+++AGF
Sbjct: 246 RSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVH 305
Query: 286 TLDSKESLCIFSLMV 300
E+L +F LMV
Sbjct: 306 NQRYDEALEMFHLMV 320
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 119/241 (49%), Gaps = 6/241 (2%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
LI Y + A +FDE T R++V+W +++ G+ + A ++F M+++ V +
Sbjct: 268 LIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVD 327
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
T+ ++L+ CK + HG+ ++ G + + + ++L+D Y T C +D A V
Sbjct: 328 EVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVAL-SSLIDAY-TSCSLVDDAGTV 385
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
+ + K+ VS +T+I+G H G + + +F M ++ S ++AC+
Sbjct: 386 LDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISL---LNACSVSADL 442
Query: 225 ILGKQLHAAVINHGFQSN-LPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAG 283
K H I N + V SI+D Y +C A++ F ++T+K+ I+W +I+
Sbjct: 443 RTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISA 502
Query: 284 F 284
+
Sbjct: 503 Y 503
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 117/244 (47%), Gaps = 7/244 (2%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
+ LI +Y + +A T+ D MT++DVV+ + MI+G A +F M RD
Sbjct: 367 SSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHM-RD--T 423
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
PNA T+ ++L AC L + AHG+A++ + I V +++D YA C +++ AR
Sbjct: 424 PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKC-GAIEMAR 482
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVG 222
F+ I KN +SWT +I+ Y G L +F +M + + ++ A+SAC G
Sbjct: 483 RTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGG 542
Query: 223 SGILGKQLHAAVINHGFQSNLPVMNSILDMYCRC---RCASEAKQFFCEMTQKDTITWNT 279
G + +++ + +L + I+DM R A E + E + W
Sbjct: 543 LVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGA 602
Query: 280 LIAG 283
+++G
Sbjct: 603 ILSG 606
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 26/179 (14%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
T ++ +Y G+I+ A FD++T +++++WT +I+ Y +A +F M + G
Sbjct: 466 TSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYT 525
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDN---ALMDMYATCCDSMD 159
PNA T A L AC HG VK G V+ + Y+ D +
Sbjct: 526 PNAVTYLAALSACN-----------HGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLS 574
Query: 160 RARMV---------FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPF 209
RA + + V A +W +++G +R F L + ++V E EL P
Sbjct: 575 RAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNR---FKKLIITSEVVAEVLELEPL 630
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 137/268 (51%), Gaps = 6/268 (2%)
Query: 34 RPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVF 93
R KDL T+ + Y G +EA LFD M R++V+W AM+ GY + A
Sbjct: 325 RSKDLKSWTSAM-SGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFL 383
Query: 94 PRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYAT 153
M ++ + TL +L C G+ + G+ AHG + G +++ V NAL+DMY
Sbjct: 384 TLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGY-DTNVIVANALLDMYGK 442
Query: 154 CCDSMDRARMVFEDIVT-KNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFS 212
C ++ A + F + ++ VSW L+TG G + L F M +E + S ++ +
Sbjct: 443 C-GTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVE-AKPSKYTLA 500
Query: 213 IAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK 272
++ CA++ + LGK +H +I G++ ++ + +++DMY +CRC A + F E +
Sbjct: 501 TLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATR 560
Query: 273 DTITWNTLIAG-FETLDSKESLCIFSLM 299
D I WN++I G SKE +F L+
Sbjct: 561 DLILWNSIIRGCCRNGRSKEVFELFMLL 588
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 139/283 (49%), Gaps = 7/283 (2%)
Query: 20 VVLHHRTQLNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITG 79
VV + Q + F P L I++Y G + +A LF+EM RD +W A+IT
Sbjct: 77 VVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITA 136
Query: 80 YTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGS 139
+++F RM RDGVR + + VLK+C + L H VK G G
Sbjct: 137 CAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSG- 195
Query: 140 SIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQM 199
++ ++ +++D+Y C M AR VF++IV + VSW ++ Y G + +F +M
Sbjct: 196 NVDLETSIVDVYGK-CRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKM 254
Query: 200 VLEEGELSPFSFSIA--VSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCR 257
+ E + P + +++ + AC+ + +GK +HA + ++ V S+ DMY +C
Sbjct: 255 L--ELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCD 312
Query: 258 CASEAKQFFCEMTQKDTITWNTLIAGFETLD-SKESLCIFSLM 299
A++ F + KD +W + ++G+ ++E+ +F LM
Sbjct: 313 RLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLM 355
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 112/229 (48%), Gaps = 9/229 (3%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTH-RDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRP 103
L+ Y G++Q A+ F +M+ RD V+W A++TG +A F M + +P
Sbjct: 436 LLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KP 494
Query: 104 NAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARM 163
+ +TL+ +L C + AL G+ HG ++ G + + + A++DMY+ C D A
Sbjct: 495 SKYTLATLLAGCANIPALNLGKAIHGFLIRDGYK-IDVVIRGAMVDMYSKC-RCFDYAIE 552
Query: 164 VFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAVSACASV 221
VF++ T++ + W ++I G G + +F M+LE + P +F + AC
Sbjct: 553 VFKEAATRDLILWNSIIRGCCRNGRSKEVFELF--MLLENEGVKPDHVTFLGILQACIRE 610
Query: 222 GSGILGKQLHAAV-INHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM 269
G LG Q +++ + + + ++++YC+ C + ++F M
Sbjct: 611 GHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLM 659
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 134/254 (52%), Gaps = 9/254 (3%)
Query: 52 KGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAV 111
+ S+ A LF+ M+ D+V + +M GY+ + + +F +L DG+ P+ +T ++
Sbjct: 76 ESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSL 135
Query: 112 LKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTK 171
LKAC +AL G H L++K+G ++YV L++MY T C+ +D AR VF+ IV
Sbjct: 136 LKACAVAKALEEGRQLHCLSMKLGL-DDNVYVCPTLINMY-TECEDVDSARCVFDRIVEP 193
Query: 172 NAVSWTTLITGYTHRGDAFGGLRVFRQM---VLEEGELSPFSFSIAVSACASVGSGILGK 228
V + +ITGY R L +FR+M L+ E++ S +S+CA +GS LGK
Sbjct: 194 CVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLS---VLSSCALLGSLDLGK 250
Query: 229 QLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLD 288
+H H F + V +++DM+ +C +A F +M KDT W+ +I +
Sbjct: 251 WIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHG 310
Query: 289 SKE-SLCIFSLMVS 301
E S+ +F M S
Sbjct: 311 KAEKSMLMFERMRS 324
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 118/241 (48%), Gaps = 4/241 (1%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
LI Y + + A +FD + VV + AMITGY N + A +F M ++PN
Sbjct: 170 LINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPN 229
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
TL +VL +C L +L G+ H A K + + V+ AL+DM+A C S+D A +
Sbjct: 230 EITLLSVLSSCALLGSLDLGKWIHKYAKK-HSFCKYVKVNTALIDMFAK-CGSLDDAVSI 287
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
FE + K+ +W+ +I Y + G A + +F +M E + +F ++AC+ G
Sbjct: 288 FEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRV 347
Query: 225 ILGKQLHAAVINH-GFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDT-ITWNTLIA 282
G++ + +++ G ++ S++D+ R +A +F ++ T + W L+A
Sbjct: 348 EEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLA 407
Query: 283 G 283
Sbjct: 408 A 408
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ T LI + GS+ +A ++F++M ++D AW+AMI Y + ++ +F RM +
Sbjct: 267 VNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSEN 326
Query: 101 VRPNAFTLSAVLKAC 115
V+P+ T +L AC
Sbjct: 327 VQPDEITFLGLLNAC 341
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 142/299 (47%), Gaps = 44/299 (14%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L L+ Y G+ A +FDEM HRD +AW +++T N + VF +
Sbjct: 40 LANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSS 99
Query: 101 -VRPNAFTLSAVLKACKGLRALFCGELAHGLAVK----IGARGSSIYVDNALMDMYATCC 155
+RP+ F SA++KAC L G + HG V + + V ++L+DMYA C
Sbjct: 100 GLRPDDFVFSALVKACANL-----GSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKC- 153
Query: 156 DSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQM--------------VL 201
++ A+ VF+ I KN +SWT +++GY G L +FR + +
Sbjct: 154 GLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFV 213
Query: 202 EEGE------------------LSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNL 243
+ G+ L P S V ACA++ + I G+Q+H VI GF S +
Sbjct: 214 QSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCV 273
Query: 244 PVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF-ETLDSKESLCIFSLMVS 301
+ N+++DMY +C AK F M +D ++W +LI G + ++++L ++ MVS
Sbjct: 274 FISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVS 332
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 2/161 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
++ LI Y + A +F M HRDVV+WT++I G +A ++ M+ G
Sbjct: 275 ISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHG 334
Query: 101 VRPNAFTLSAVLKACKGLRALFCG-ELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD 159
V+PN T ++ AC + + G EL + G R S + L+D+ +
Sbjct: 335 VKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHY-TCLLDLLGRSGLLDE 393
Query: 160 RARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMV 200
++ + +W L++ +G G+R+ +V
Sbjct: 394 AENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLV 434
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 127/241 (52%), Gaps = 3/241 (1%)
Query: 53 GSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRA-WKVFPRMLRDGVRPNAFTLSAV 111
S++ A +FDE+ + AW +I Y S + W + PN +T +
Sbjct: 78 ASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFL 137
Query: 112 LKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTK 171
+KA + +L G+ HG+AVK A GS ++V N+L+ Y +C D +D A VF I K
Sbjct: 138 IKAAAEVSSLSLGQSLHGMAVK-SAVGSDVFVANSLIHCYFSCGD-LDSACKVFTTIKEK 195
Query: 172 NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLH 231
+ VSW ++I G+ +G L +F++M E+ + S + +SACA + + G+Q+
Sbjct: 196 DVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVC 255
Query: 232 AAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLDSKE 291
+ + + NL + N++LDMY +C +AK+ F M +KD +TW T++ G+ + E
Sbjct: 256 SYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYE 315
Query: 292 S 292
+
Sbjct: 316 A 316
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 132/276 (47%), Gaps = 34/276 (12%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ LI YF G + A +F + +DVV+W +MI G+ +A ++F +M +
Sbjct: 168 VANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESED 227
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
V+ + T+ VL AC +R L G ++ ++ + NA++DMY T C S++
Sbjct: 228 VKASHVTMVGVLSACAKIRNLEFGRQVCSY-IEENRVNVNLTLANAMLDMY-TKCGSIED 285
Query: 161 ARMVFEDIVTKNAVSWTT-------------------------------LITGYTHRGDA 189
A+ +F+ + K+ V+WTT LI+ Y G
Sbjct: 286 AKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKP 345
Query: 190 FGGLRVFRQMVLEEG-ELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNS 248
L VF ++ L++ +L+ + +SACA VG+ LG+ +H+ + HG + N V ++
Sbjct: 346 NEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSA 405
Query: 249 ILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
++ MY +C ++++ F + ++D W+ +I G
Sbjct: 406 LIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGL 441
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 107/246 (43%), Gaps = 9/246 (3%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRM-LRDGV 101
T ++ Y + A + + M +D+VAW A+I+ Y + A VF + L+ +
Sbjct: 302 TTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNM 361
Query: 102 RPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRA 161
+ N TL + L AC + AL G H K G R + +V +AL+ MY+ C D ++++
Sbjct: 362 KLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIR-MNFHVTSALIHMYSKCGD-LEKS 419
Query: 162 RMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASV 221
R VF + ++ W+ +I G G + +F +M +E + P + CA
Sbjct: 420 REVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKM--QEANVKPNGVTFTNVFCACS 477
Query: 222 GSGILGKQ---LHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM-TQKDTITW 277
+G++ + H N+G I+D+ R +A +F M T W
Sbjct: 478 HTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVW 537
Query: 278 NTLIAG 283
L+
Sbjct: 538 GALLGA 543
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 139/262 (53%), Gaps = 3/262 (1%)
Query: 36 KDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPR 95
+D + + L Y G + +A +FDE+ R+ VAW A++ GY + A ++F
Sbjct: 205 EDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSD 264
Query: 96 MLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCC 155
M + GV P T+S L A + + G+ +H +A+ G +I + +L++ Y
Sbjct: 265 MRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNI-LGTSLLNFYCKV- 322
Query: 156 DSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAV 215
++ A MVF+ + K+ V+W +I+GY +G + + + M LE+ + + + +
Sbjct: 323 GLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLM 382
Query: 216 SACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTI 275
SA A + LGK++ I H F+S++ + ++++DMY +C +AK+ F +KD I
Sbjct: 383 SAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLI 442
Query: 276 TWNTLIAGF-ETLDSKESLCIF 296
WNTL+A + E+ S E+L +F
Sbjct: 443 LWNTLLAAYAESGLSGEALRLF 464
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 123/244 (50%), Gaps = 2/244 (0%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ T L+ Y +++ A LF ++ R+V +W A+I A F ML +
Sbjct: 109 IETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENE 168
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
+ P+ F + V KAC L+ G HG VK G ++V ++L DMY C +D
Sbjct: 169 IFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLE-DCVFVASSLADMYGKC-GVLDD 226
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
A VF++I +NAV+W L+ GY G +R+F M + E + + S +SA A+
Sbjct: 227 ASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASAN 286
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTL 280
+G GKQ HA I +G + + + S+L+ YC+ A+ F M +KD +TWN +
Sbjct: 287 MGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLI 346
Query: 281 IAGF 284
I+G+
Sbjct: 347 ISGY 350
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 117/260 (45%), Gaps = 39/260 (15%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L + ++ Y GSI +A +FD +D++ W ++ Y A ++F M +G
Sbjct: 412 LASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEG 471
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
V PN T + ++ L L G+ VD A DM+ S
Sbjct: 472 VPPNVITWNLII-----LSLLRNGQ-----------------VDEA-KDMFLQMQSSG-- 506
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAVSAC 218
+ N +SWTT++ G G + + R+M +E L P FS ++A+SAC
Sbjct: 507 --------IIPNLISWTTMMNGMVQNGCSEEAILFLRKM--QESGLRPNAFSITVALSAC 556
Query: 219 ASVGSGILGKQLHAAVINHGFQSNL-PVMNSILDMYCRCRCASEAKQFFCEMTQKDTITW 277
A + S +G+ +H +I + S+L + S++DMY +C ++A++ F +
Sbjct: 557 AHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLS 616
Query: 278 NTLIAGFETLDS-KESLCIF 296
N +I+ + + KE++ ++
Sbjct: 617 NAMISAYALYGNLKEAIALY 636
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 106/231 (45%), Gaps = 2/231 (0%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L T L+ Y G I+ A +FD M +DVV W +I+GY A + M +
Sbjct: 311 LGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEK 370
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
++ + TL+ ++ A L G+ ++ + S I + + +MDMYA C +D
Sbjct: 371 LKYDCVTLATLMSAAARTENLKLGKEVQCYCIR-HSFESDIVLASTVMDMYAKCGSIVD- 428
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
A+ VF+ V K+ + W TL+ Y G + LR+F M LE + ++++ + +
Sbjct: 429 AKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLR 488
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQ 271
G K + + + G NL ++++ + C+ EA F +M +
Sbjct: 489 NGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQE 539
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 9/184 (4%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+I S G + EA +F +M ++++WT M+ G A +M G
Sbjct: 482 IILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESG 541
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
+RPNAF+++ L AC L +L G HG ++ S + ++ +L+DMYA C D +++
Sbjct: 542 LRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGD-INK 600
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSI--AVSAC 218
A VF + +I+ Y G+ + ++R LE L P + +I +SAC
Sbjct: 601 AEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRS--LEGVGLKPDNITITNVLSAC 658
Query: 219 ASVG 222
G
Sbjct: 659 NHAG 662
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 131 bits (329), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 132/250 (52%), Gaps = 4/250 (1%)
Query: 36 KDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPR 95
KDL + L+ Y + G + A +FDEM+ R+VV+WT+MI GY + A +F R
Sbjct: 167 KDLF-VQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFR 225
Query: 96 MLRDG-VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATC 154
M+RD V PN+ T+ V+ AC L L GE + G + + V +AL+DMY C
Sbjct: 226 MVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV-SALVDMYMKC 284
Query: 155 CDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA 214
+++D A+ +F++ N + + Y +G L VF M+ S A
Sbjct: 285 -NAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSA 343
Query: 215 VSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDT 274
+S+C+ + + + GK H V+ +GF+S + N+++DMY +C A + F M+ K
Sbjct: 344 ISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTV 403
Query: 275 ITWNTLIAGF 284
+TWN+++AG+
Sbjct: 404 VTWNSIVAGY 413
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 130/231 (56%), Gaps = 6/231 (2%)
Query: 73 WTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAV 132
+ ++I GY S + A +F RM+ G+ P+ +T L AC RA G HGL V
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 133 KIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGG 192
K+G ++V N+L+ YA C + +D AR VF+++ +N VSWT++I GY R A
Sbjct: 162 KMG-YAKDLFVQNSLVHFYAECGE-LDSARKVFDEMSERNVVSWTSMICGYARRDFAKDA 219
Query: 193 LRVFRQMVLEEGELSPFSFSI--AVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSIL 250
+ +F +MV +E E++P S ++ +SACA + G++++A + N G + N ++++++
Sbjct: 220 VDLFFRMVRDE-EVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALV 278
Query: 251 DMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLD-SKESLCIFSLMV 300
DMY +C AK+ F E + N + + + ++E+L +F+LM+
Sbjct: 279 DMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMM 329
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 118/284 (41%), Gaps = 40/284 (14%)
Query: 28 LNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHS 87
+ +S DL + + L+ Y +I A LFDE ++ AM + Y
Sbjct: 262 IRNSGIEVNDL--MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTR 319
Query: 88 RAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNAL 147
A VF M+ GVRP+ ++ + + +C LR + G+ HG ++ G S + NAL
Sbjct: 320 EALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFE-SWDNICNAL 378
Query: 148 MDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMV------- 200
+DMY C D A +F+ + K V+W +++ GY G+ F M
Sbjct: 379 IDMYMKC-HRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSW 437
Query: 201 ------LEEGELSPFSFSIAV---------------------SACASVGSGILGKQLHAA 233
L +G L F +I V SAC +G+ L K ++
Sbjct: 438 NTIISGLVQGSL--FEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYY 495
Query: 234 VINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITW 277
+ +G Q ++ + +++DM+ RC A F +T +D W
Sbjct: 496 IEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAW 539
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 123/272 (45%), Gaps = 14/272 (5%)
Query: 22 LHHRTQLNDSPFRPKDLTGLTT-----DLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAM 76
++ + D+ FR D T ++ Y + G + A F+ M +++V+W +
Sbjct: 381 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTI 440
Query: 77 ITGYTSCNHHSRAWKVFPRML-RDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIG 135
I+G + A +VF M ++GV + T+ ++ AC L AL +LA + I
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGAL---DLAKWIYYYIE 497
Query: 136 ARGSSIYV--DNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGL 193
G + V L+DM++ C D + A +F + ++ +WT I G+A +
Sbjct: 498 KNGIQLDVRLGTTLVDMFSRCGDP-ESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAI 556
Query: 194 RVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVIN-HGFQSNLPVMNSILDM 252
+F M+ + + +F A++AC+ G GK++ +++ HG ++D+
Sbjct: 557 ELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDL 616
Query: 253 YCRCRCASEAKQFFCEM-TQKDTITWNTLIAG 283
R EA Q +M + + + WN+L+A
Sbjct: 617 LGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAA 648
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 79/158 (50%), Gaps = 7/158 (4%)
Query: 150 MYATCCDSMDRARMVFEDIVTKNAVSWTT------LITGYTHRGDAFGGLRVFRQMVLEE 203
+ A C+ R + F V +N+ S+ T LI GY G + +F +M+
Sbjct: 70 LVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSG 129
Query: 204 GELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAK 263
++F +SACA + G Q+H ++ G+ +L V NS++ Y C A+
Sbjct: 130 ISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSAR 189
Query: 264 QFFCEMTQKDTITWNTLIAGFETLD-SKESLCIFSLMV 300
+ F EM++++ ++W ++I G+ D +K+++ +F MV
Sbjct: 190 KVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMV 227
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 131 bits (329), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 123/240 (51%), Gaps = 2/240 (0%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
LI SYF G +FD M+HR+V+ TA+I+G H ++F M R V PN
Sbjct: 196 LITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPN 255
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
+ T + L AC G + + G+ H L K G S + +++ALMDMY+ C S++ A +
Sbjct: 256 SVTYLSALAACSGSQRIVEGQQIHALLWKYGIE-SELCIESALMDMYSK-CGSIEDAWTI 313
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
FE + VS T ++ G G ++ F +M+ E+ S + S
Sbjct: 314 FESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSL 373
Query: 225 ILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
LGKQLH+ VI F N V N +++MY +C ++++ F M +++ ++WN++IA F
Sbjct: 374 GLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAF 433
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 118/244 (48%), Gaps = 4/244 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ + L+ Y GSI++A T+F+ T D V+ T ++ G A + F RML+ G
Sbjct: 293 IESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAG 352
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
V +A +SAVL +L G+ H L +K G++ +V+N L++MY+ C D D
Sbjct: 353 VEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNT-FVNNGLINMYSKCGDLTD- 410
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
++ VF + +N VSW ++I + G L+++ +M E + + +F + AC+
Sbjct: 411 SQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSH 470
Query: 221 VGSGILGKQLHAAVIN-HGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK-DTITWN 278
VG G++L + HG + I+DM R EAK F + K D W
Sbjct: 471 VGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQ 530
Query: 279 TLIA 282
L+
Sbjct: 531 ALLG 534
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 119/254 (46%), Gaps = 7/254 (2%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
L+ Y G + +A LFDEM RDV++ + G+ + + RML G +
Sbjct: 96 LLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGFDH 155
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
A TL+ VL C ++ H LA+ + I V N L+ Y C S+ R V
Sbjct: 156 A-TLTIVLSVCDTPEFCLVTKMIHALAI-LSGYDKEISVGNKLITSYFKCGCSVS-GRGV 212
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSI--AVSACASVG 222
F+ + +N ++ T +I+G GLR+F M G + P S + A++AC+
Sbjct: 213 FDGMSHRNVITLTAVISGLIENELHEDGLRLFSLM--RRGLVHPNSVTYLSALAACSGSQ 270
Query: 223 SGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIA 282
+ G+Q+HA + +G +S L + ++++DMY +C +A F T+ D ++ ++
Sbjct: 271 RIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILV 330
Query: 283 GFETLDSKESLCIF 296
G S+E F
Sbjct: 331 GLAQNGSEEEAIQF 344
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 82/162 (50%), Gaps = 3/162 (1%)
Query: 139 SSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQ 198
+++ V N+L+ +YA C +D ++ F+++ ++ +S + G+ + G + ++
Sbjct: 88 NALVVWNSLLSLYAKCGKLVDAIKL-FDEMPMRDVISQNIVFYGFLRNRETESGFVLLKR 146
Query: 199 MVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRC 258
M L G + +I +S C + ++ K +HA I G+ + V N ++ Y +C C
Sbjct: 147 M-LGSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGC 205
Query: 259 ASEAKQFFCEMTQKDTITWNTLIAGF-ETLDSKESLCIFSLM 299
+ + F M+ ++ IT +I+G E ++ L +FSLM
Sbjct: 206 SVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLM 247
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 129/249 (51%), Gaps = 9/249 (3%)
Query: 58 AHTLFDEMTHR-DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG-VRPNAFTLSAVLKAC 115
AH +F ++ +V W +I GY + A+ ++ M G V P+ T ++KA
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 116 KGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVS 175
+ + GE H + ++ G GS IYV N+L+ +YA C D + A VF+ + K+ V+
Sbjct: 132 TTMADVRLGETIHSVVIRSGF-GSLIYVQNSLLHLYANCGD-VASAYKVFDKMPEKDLVA 189
Query: 176 WTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA--VSACASVGSGILGKQLHAA 233
W ++I G+ G L ++ +M + P F+I +SACA +G+ LGK++H
Sbjct: 190 WNSVINGFAENGKPEEALALYTEM--NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVY 247
Query: 234 VINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLD-SKES 292
+I G NL N +LD+Y RC EAK F EM K++++W +LI G KE+
Sbjct: 248 MIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEA 307
Query: 293 LCIFSLMVS 301
+ +F M S
Sbjct: 308 IELFKYMES 316
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 122/259 (47%), Gaps = 25/259 (9%)
Query: 38 LTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRML 97
L + L+ Y + G + A+ +FD+M +D+VAW ++I G+ A ++ M
Sbjct: 155 LIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMN 214
Query: 98 RDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDS 157
G++P+ FT+ ++L AC + AL G+ H +K+G +++ N L+D+YA C
Sbjct: 215 SKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLT-RNLHSSNVLLDLYAR-CGR 272
Query: 158 MDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSA 217
++ A+ +F+++V KN+VSWT+LI G G + +F+ M EG L
Sbjct: 273 VEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLL----------P 322
Query: 218 CASVGSGILGKQLHAAVINHGF------------QSNLPVMNSILDMYCRCRCASEAKQF 265
C GIL H ++ GF + + ++D+ R +A ++
Sbjct: 323 CEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEY 382
Query: 266 FCEMT-QKDTITWNTLIAG 283
M Q + + W TL+
Sbjct: 383 IKSMPMQPNVVIWRTLLGA 401
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 71/165 (43%), Gaps = 21/165 (12%)
Query: 39 TGLTTDLIKS------YFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKV 92
GLT +L S Y G ++EA TLFDEM ++ V+WT++I G A ++
Sbjct: 251 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIEL 310
Query: 93 FPRMLR-DGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMY 151
F M +G+ P T +L AC CG + G + R Y ++ +
Sbjct: 311 FKYMESTEGLLPCEITFVGILYACS-----HCGMVKEGF--EYFRRMREEYKIEPRIEHF 363
Query: 152 ATCCDSMDRARMV---FEDI----VTKNAVSWTTLITGYTHRGDA 189
D + RA V +E I + N V W TL+ T GD+
Sbjct: 364 GCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDS 408
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 125/252 (49%), Gaps = 11/252 (4%)
Query: 54 SIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLK 113
++ A ++F+ + V W +MI GY++ + +A + MLR G P+ FT VLK
Sbjct: 56 NLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLK 115
Query: 114 ACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNA 173
AC GLR + G HG VK G ++YV L+ MY CC ++ VFEDI N
Sbjct: 116 ACSGLRDIQFGSCVHGFVVKTGFE-VNMYVSTCLLHMY-MCCGEVNYGLRVFEDIPQWNV 173
Query: 174 VSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAA 233
V+W +LI+G+ + + FR+M + + + AC + GK H
Sbjct: 174 VAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGF 233
Query: 234 VINHGFQS--------NLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF- 284
+ GF N+ + S++DMY +C A+ F M ++ ++WN++I G+
Sbjct: 234 LQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYS 293
Query: 285 ETLDSKESLCIF 296
+ D++E+LC+F
Sbjct: 294 QNGDAEEALCMF 305
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 135/267 (50%), Gaps = 9/267 (3%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
++T L+ Y G + +F+++ +VVAW ++I+G+ + N S A + F M +G
Sbjct: 144 VSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNG 203
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIG-------ARGSSIYVDNALMDMYAT 153
V+ N + +L AC + + G+ HG +G G ++ + +L+DMYA
Sbjct: 204 VKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAK 263
Query: 154 CCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSI 213
C D + AR +F+ + + VSW ++ITGY+ GDA L +F M+ +F
Sbjct: 264 CGD-LRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLS 322
Query: 214 AVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKD 273
+ A G LG+ +HA V GF + ++ ++++MY + A AK+ F ++ +KD
Sbjct: 323 VIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKD 382
Query: 274 TITWNTLIAGFETLD-SKESLCIFSLM 299
TI W +I G + E+L IF M
Sbjct: 383 TIAWTVVIIGLASHGHGNEALSIFQRM 409
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 125/257 (48%), Gaps = 11/257 (4%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L T LI Y G ++ A LFD M R +V+W ++ITGY+ A +F ML G
Sbjct: 253 LATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLG 312
Query: 101 VRPNAFTLSAVLKA--CKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSM 158
+ P+ T +V++A +G L G+ H K G + V AL++MYA D+
Sbjct: 313 IAPDKVTFLSVIRASMIQGCSQL--GQSIHAYVSKTGFVKDAAIV-CALVNMYAKTGDA- 368
Query: 159 DRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAVS 216
+ A+ FED+ K+ ++WT +I G G L +F++M E+G +P ++ +
Sbjct: 369 ESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRM-QEKGNATPDGITYLGVLY 427
Query: 217 ACASVGSGILGKQLHAAVIN-HGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTI 275
AC+ +G G++ A + + HG + + ++D+ R EA++ M K +
Sbjct: 428 ACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNV 487
Query: 276 T-WNTLIAGFETLDSKE 291
W L+ G + ++ E
Sbjct: 488 NIWGALLNGCDIHENLE 504
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 88/178 (49%), Gaps = 7/178 (3%)
Query: 111 VLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD--RARMVFEDI 168
+L + R+L HGL +K + I + L+D TC ++M+ AR VFE I
Sbjct: 9 ILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSR-LIDFCTTCPETMNLSYARSVFESI 67
Query: 169 VTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAVSACASVGSGIL 226
+ W ++I GY++ + L +F Q +L +G SP F+F + AC+ +
Sbjct: 68 DCPSVYIWNSMIRGYSNSPNPDKAL-IFYQEMLRKG-YSPDYFTFPYVLKACSGLRDIQF 125
Query: 227 GKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
G +H V+ GF+ N+ V +L MY C + + F ++ Q + + W +LI+GF
Sbjct: 126 GSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGF 183
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 130 bits (328), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 132/250 (52%), Gaps = 4/250 (1%)
Query: 36 KDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPR 95
KDL + L+ Y + G + A +FDEM+ R+VV+WT+MI GY + A +F R
Sbjct: 167 KDLF-VQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFR 225
Query: 96 MLRDG-VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATC 154
M+RD V PN+ T+ V+ AC L L GE + G + + V +AL+DMY C
Sbjct: 226 MVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV-SALVDMYMKC 284
Query: 155 CDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA 214
+++D A+ +F++ N + + Y +G L VF M+ S A
Sbjct: 285 -NAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSA 343
Query: 215 VSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDT 274
+S+C+ + + + GK H V+ +GF+S + N+++DMY +C A + F M+ K
Sbjct: 344 ISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTV 403
Query: 275 ITWNTLIAGF 284
+TWN+++AG+
Sbjct: 404 VTWNSIVAGY 413
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 130/231 (56%), Gaps = 6/231 (2%)
Query: 73 WTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAV 132
+ ++I GY S + A +F RM+ G+ P+ +T L AC RA G HGL V
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 133 KIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGG 192
K+G ++V N+L+ YA C + +D AR VF+++ +N VSWT++I GY R A
Sbjct: 162 KMG-YAKDLFVQNSLVHFYAECGE-LDSARKVFDEMSERNVVSWTSMICGYARRDFAKDA 219
Query: 193 LRVFRQMVLEEGELSPFSFSI--AVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSIL 250
+ +F +MV +E E++P S ++ +SACA + G++++A + N G + N ++++++
Sbjct: 220 VDLFFRMVRDE-EVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALV 278
Query: 251 DMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLD-SKESLCIFSLMV 300
DMY +C AK+ F E + N + + + ++E+L +F+LM+
Sbjct: 279 DMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMM 329
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 118/284 (41%), Gaps = 40/284 (14%)
Query: 28 LNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHS 87
+ +S DL + + L+ Y +I A LFDE ++ AM + Y
Sbjct: 262 IRNSGIEVNDL--MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTR 319
Query: 88 RAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNAL 147
A VF M+ GVRP+ ++ + + +C LR + G+ HG ++ G S + NAL
Sbjct: 320 EALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFE-SWDNICNAL 378
Query: 148 MDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMV------- 200
+DMY C D A +F+ + K V+W +++ GY G+ F M
Sbjct: 379 IDMYMKC-HRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSW 437
Query: 201 ------LEEGELSPFSFSIAV---------------------SACASVGSGILGKQLHAA 233
L +G L F +I V SAC +G+ L K ++
Sbjct: 438 NTIISGLVQGSL--FEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYY 495
Query: 234 VINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITW 277
+ +G Q ++ + +++DM+ RC A F +T +D W
Sbjct: 496 IEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAW 539
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 123/272 (45%), Gaps = 14/272 (5%)
Query: 22 LHHRTQLNDSPFRPKDLTGLTT-----DLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAM 76
++ + D+ FR D T ++ Y + G + A F+ M +++V+W +
Sbjct: 381 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTI 440
Query: 77 ITGYTSCNHHSRAWKVFPRML-RDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIG 135
I+G + A +VF M ++GV + T+ ++ AC L AL +LA + I
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGAL---DLAKWIYYYIE 497
Query: 136 ARGSSIYV--DNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGL 193
G + V L+DM++ C D + A +F + ++ +WT I G+A +
Sbjct: 498 KNGIQLDVRLGTTLVDMFSRCGDP-ESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAI 556
Query: 194 RVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVIN-HGFQSNLPVMNSILDM 252
+F M+ + + +F A++AC+ G GK++ +++ HG ++D+
Sbjct: 557 ELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDL 616
Query: 253 YCRCRCASEAKQFFCEM-TQKDTITWNTLIAG 283
R EA Q +M + + + WN+L+A
Sbjct: 617 LGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAA 648
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 79/158 (50%), Gaps = 7/158 (4%)
Query: 150 MYATCCDSMDRARMVFEDIVTKNAVSWTT------LITGYTHRGDAFGGLRVFRQMVLEE 203
+ A C+ R + F V +N+ S+ T LI GY G + +F +M+
Sbjct: 70 LVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSG 129
Query: 204 GELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAK 263
++F +SACA + G Q+H ++ G+ +L V NS++ Y C A+
Sbjct: 130 ISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSAR 189
Query: 264 QFFCEMTQKDTITWNTLIAGFETLD-SKESLCIFSLMV 300
+ F EM++++ ++W ++I G+ D +K+++ +F MV
Sbjct: 190 KVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMV 227
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 131/262 (50%), Gaps = 4/262 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L +L+ Y I A LFDEM+HR V AWT MI+ +T + A +F M+ G
Sbjct: 60 LCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASG 119
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
PN FT S+V+++C GLR + G HG +K G G+S+ V ++L D+Y+ C
Sbjct: 120 THPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSV-VGSSLSDLYSK-CGQFKE 177
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
A +F + + +SWT +I+ L+ + +MV + F+F + A +
Sbjct: 178 ACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSF 237
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTL 280
+G GK +H+ +I G N+ + S++D Y + +A + ++D W ++
Sbjct: 238 LGLE-FGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSV 296
Query: 281 IAGF-ETLDSKESLCIFSLMVS 301
++GF L +KE++ F M S
Sbjct: 297 VSGFVRNLRAKEAVGTFLEMRS 318
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 127/263 (48%), Gaps = 8/263 (3%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L T L+ Y +++A + + +DV WT++++G+ A F M G
Sbjct: 261 LKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLG 320
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
++PN FT SA+L C +R+L G+ H +K+G S+ V NAL+DMY C S
Sbjct: 321 LQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDST-DVGNALVDMYMKCSASEVE 379
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRG---DAFGGLRVFRQMVLEEGELSPFSFSIAVSA 217
A VF +V+ N VSWTTLI G G D FG + +MV E E + + S + A
Sbjct: 380 ASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFG---LLMEMVKREVEPNVVTLSGVLRA 436
Query: 218 CASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITW 277
C+ + ++HA ++ + V NS++D Y R A M ++D IT+
Sbjct: 437 CSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITY 496
Query: 278 NTLIAGFETLDSKE-SLCIFSLM 299
+L+ F L E +L + + M
Sbjct: 497 TSLVTRFNELGKHEMALSVINYM 519
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 120/250 (48%), Gaps = 3/250 (1%)
Query: 36 KDLTGLTTDLIKSYFD-KGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFP 94
+D T + L+ Y S EA +F M +VV+WT +I G + +
Sbjct: 357 EDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLM 416
Query: 95 RMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATC 154
M++ V PN TLS VL+AC LR + H ++ G + V N+L+D YA+
Sbjct: 417 EMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMV-VGNSLVDAYASS 475
Query: 155 CDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA 214
+D A V + ++ +++T+L+T + G L V M + + S
Sbjct: 476 -RKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGF 534
Query: 215 VSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDT 274
+SA A++G+ GK LH + GF V+NS++DMY +C +AK+ F E+ D
Sbjct: 535 ISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDV 594
Query: 275 ITWNTLIAGF 284
++WN L++G
Sbjct: 595 VSWNGLVSGL 604
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 91/176 (51%), Gaps = 2/176 (1%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
L+ +Y + A + M RD + +T+++T + H A V M DG+R +
Sbjct: 468 LVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMD 527
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
+L + A L AL G+ H +VK G G++ V N+L+DMY+ C S++ A+ V
Sbjct: 528 QLSLPGFISASANLGALETGKHLHCYSVKSGFSGAA-SVLNSLVDMYSKC-GSLEDAKKV 585
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
FE+I T + VSW L++G G L F +M ++E E +F I +SAC++
Sbjct: 586 FEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSN 641
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 134/269 (49%), Gaps = 9/269 (3%)
Query: 39 TGLTTD------LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKV 92
TG + D ++ Y + E LFDEM D V++ +I+ Y+ + + +
Sbjct: 279 TGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHF 338
Query: 93 FPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYA 152
F M G F + +L L +L G H A+ + S ++V N+L+DMYA
Sbjct: 339 FREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL-LATADSILHVGNSLVDMYA 397
Query: 153 TCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFS 212
C + + A ++F+ + + VSWT LI+GY +G GL++F +M +F+
Sbjct: 398 KC-EMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFA 456
Query: 213 IAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK 272
+ A AS S +LGKQLHA +I G N+ + ++DMY +C +A Q F EM +
Sbjct: 457 TVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDR 516
Query: 273 DTITWNTLIAGF-ETLDSKESLCIFSLMV 300
+ ++WN LI+ + D + ++ F+ M+
Sbjct: 517 NAVSWNALISAHADNGDGEAAIGAFAKMI 545
Score = 127 bits (320), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 129/241 (53%), Gaps = 4/241 (1%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
L+KSY + + A LF+E+ +D V + +ITGY ++ + +F +M + G +P+
Sbjct: 190 LLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPS 249
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIG-ARGSSIYVDNALMDMYATCCDSMDRARM 163
FT S VLKA GL G+ H L+V G +R +S V N ++D Y+ D + RM
Sbjct: 250 DFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDAS--VGNQILDFYSKH-DRVLETRM 306
Query: 164 VFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGS 223
+F+++ + VS+ +I+ Y+ L FR+M + F F+ +S A++ S
Sbjct: 307 LFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSS 366
Query: 224 GILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAG 283
+G+QLH + S L V NS++DMY +C EA+ F + Q+ T++W LI+G
Sbjct: 367 LQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISG 426
Query: 284 F 284
+
Sbjct: 427 Y 427
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 126/269 (46%), Gaps = 5/269 (1%)
Query: 35 PKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFP 94
P T T +I + G + A LFD M R VV WT ++ Y +H A+K+F
Sbjct: 75 PHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFR 134
Query: 95 RMLRDG--VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSS-IYVDNALMDMY 151
+M R P+ T + +L C H AVK+G + + V N L+ Y
Sbjct: 135 QMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSY 194
Query: 152 ATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSF 211
+D A ++FE+I K++V++ TLITGY G + +F +M + S F+F
Sbjct: 195 CEV-RRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTF 253
Query: 212 SIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQ 271
S + A + LG+QLHA + GF + V N ILD Y + E + F EM +
Sbjct: 254 SGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPE 313
Query: 272 KDTITWNTLIAGFETLDSKE-SLCIFSLM 299
D +++N +I+ + D E SL F M
Sbjct: 314 LDFVSYNVVISSYSQADQYEASLHFFREM 342
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 117/241 (48%), Gaps = 8/241 (3%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
L+ Y +EA +F + R V+WTA+I+GY H K+F +M +R +
Sbjct: 392 LVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRAD 451
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
T + VLKA +L G+ H ++ G +++ + L+DMYA C S+ A V
Sbjct: 452 QSTFATVLKASASFASLLLGKQLHAFIIRSG-NLENVFSGSGLVDMYAKC-GSIKDAVQV 509
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSI--AVSACASVG 222
FE++ +NAVSW LI+ + GD + F +M+ E L P S SI ++AC+ G
Sbjct: 510 FEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMI--ESGLQPDSVSILGVLTACSHCG 567
Query: 223 SGILGKQLHAAVIN-HGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT-QKDTITWNTL 280
G + A+ +G +LD+ R +EA++ EM + D I W+++
Sbjct: 568 FVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSV 627
Query: 281 I 281
+
Sbjct: 628 L 628
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 153/298 (51%), Gaps = 19/298 (6%)
Query: 16 PAPSVVLHHRTQLNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTA 75
P + LH R + F K L + LI Y + ++A +FDE+T R+ ++ A
Sbjct: 38 PLHVLQLHARIVV----FSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNA 93
Query: 76 MITGYTSCNHHSRAWKVFPRML------RDGVRPNAFTLSAVLKACKGLRALFCGELA-- 127
++ YTS + A+ +F + D RP++ ++S VLKA G + G LA
Sbjct: 94 LLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQ 153
Query: 128 -HGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHR 186
HG ++ G S ++V N ++ Y T CD+++ AR VF+++ ++ VSW ++I+GY+
Sbjct: 154 VHGFVIR-GGFDSDVFVGNGMITYY-TKCDNIESARKVFDEMSERDVVSWNSMISGYSQS 211
Query: 187 GDAFGGLRVFRQMVLEEGELSPFSFSI--AVSACASVGSGILGKQLHAAVINHGFQSNLP 244
G +F + + +L + P ++ AC I G ++H +I + Q +L
Sbjct: 212 G-SFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLS 270
Query: 245 VMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLD-SKESLCIFSLMVS 301
+ N+++ Y +C A+ F EM++KD++T+ +I+G+ KE++ +FS M S
Sbjct: 271 LCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMES 328
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 116/250 (46%), Gaps = 6/250 (2%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
+I Y G ++EA LF EM + W AMI+G NHH F M+R G RPN
Sbjct: 306 IISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPN 365
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
TLS++L + L G+ H A++ GA ++IYV +++D YA + R V
Sbjct: 366 TVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGA-DNNIYVTTSIIDNYAKLGFLLGAQR-V 423
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
F++ ++ ++WT +IT Y GD+ +F QM + + + +SA A G
Sbjct: 424 FDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDS 483
Query: 225 ILGKQLHAAVI-NHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTI--TWNTLI 281
+ + + +++ + + + ++ + R S+A +F +M D I W L+
Sbjct: 484 DMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMP-IDPIAKVWGALL 542
Query: 282 AGFETLDSKE 291
G L E
Sbjct: 543 NGASVLGDLE 552
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 128/288 (44%), Gaps = 46/288 (15%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLR-DGVRP 103
+I Y +I+ A +FDEM+ RDVV+W +MI+GY+ K++ ML +P
Sbjct: 173 MITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKP 232
Query: 104 NAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVD----NALMDMYATCCDSMD 159
N T+ +V +AC +L GL V + I +D NA++ YA C S+D
Sbjct: 233 NGVTVISVFQACGQ-----SSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKC-GSLD 286
Query: 160 RARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA----- 214
AR +F+++ K++V++ +I+GY G + +F +M E LS ++ I+
Sbjct: 287 YARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEM--ESIGLSTWNAMISGLMQN 344
Query: 215 ------------VSACASVGSGIL----------------GKQLHAAVINHGFQSNLPVM 246
+ C S + + GK++HA I +G +N+ V
Sbjct: 345 NHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVT 404
Query: 247 NSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLDSKESLC 294
SI+D Y + A++ F + I W +I + +S C
Sbjct: 405 TSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSAC 452
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+TT +I +Y G + A +FD R ++AWTA+IT Y A +F +M G
Sbjct: 403 VTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLG 462
Query: 101 VRPNAFTLSAVLKA 114
+P+ TL+AVL A
Sbjct: 463 TKPDDVTLTAVLSA 476
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 122/244 (50%), Gaps = 8/244 (3%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ T L+ Y KG + A LFDEM RD V W A+I GY+ + AWK+F ML+ G
Sbjct: 87 VKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQG 146
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
P+A TL +L C + G HG+A K G S V NAL+ Y+ C + +
Sbjct: 147 FSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDS-QVKNALISFYSKCAE-LGS 204
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
A ++F ++ K+ VSW T+I Y+ G + VF+ M + E+SP + +SA S
Sbjct: 205 AEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVS 264
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTL 280
+ LH V+ G +++ V+ S++ Y RC C A++ + Q + ++
Sbjct: 265 ------HEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSI 318
Query: 281 IAGF 284
++ +
Sbjct: 319 VSCY 322
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 119/246 (48%), Gaps = 5/246 (2%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ T L+ +Y G + A L+ +V T++++ Y A F + +
Sbjct: 283 VVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLC 342
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
++ +A L +L CK + G HG A+K G ++ V N L+ MY+ D ++
Sbjct: 343 MKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVV-NGLITMYSKF-DDVET 400
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA--VSAC 218
+FE + +SW ++I+G G A VF QM+L G L P + +IA ++ C
Sbjct: 401 VLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGG-LLPDAITIASLLAGC 459
Query: 219 ASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWN 278
+ + LGK+LH + + F++ V +++DMY +C +A+ F + T TWN
Sbjct: 460 SQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWN 519
Query: 279 TLIAGF 284
++I+G+
Sbjct: 520 SMISGY 525
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 116/250 (46%), Gaps = 9/250 (3%)
Query: 39 TGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPR-ML 97
T + LI Y ++ LF+++ +++W ++I+G S A++VF + ML
Sbjct: 382 TLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMML 441
Query: 98 RDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDS 157
G+ P+A T++++L C L L G+ HG ++ + +V AL+DMYA C +
Sbjct: 442 TGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENEN-FVCTALIDMYAKCGNE 500
Query: 158 MDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAV 215
+ +A VF+ I +W ++I+GY+ G L + +M E L P +F +
Sbjct: 501 V-QAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEM--REKGLKPDEITFLGVL 557
Query: 216 SACASVGSGILGKQLHAAVINH-GFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK-D 273
SAC G GK A+I G L ++ + R +EA +M K D
Sbjct: 558 SACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPD 617
Query: 274 TITWNTLIAG 283
+ W L++
Sbjct: 618 SAVWGALLSA 627
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 117/243 (48%), Gaps = 19/243 (7%)
Query: 67 HRDVVAWTAMITGYTSCNH---HSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFC 123
+RD+ + +++ SC H S +F +LR + PN FT+S L+A F
Sbjct: 10 YRDLSYFHSLLK---SCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFK 66
Query: 124 GELAHGLAVKIGARGSS--IYVDNALMDMYAT--CCDSMDRARMVFEDIVTKNAVSWTTL 179
++ + + G +YV +L+++Y C S A+M+F+++ ++ V W L
Sbjct: 67 LQVEQ-VQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTS---AQMLFDEMPERDTVVWNAL 122
Query: 180 ITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA--VSACASVGSGILGKQLHAAVINH 237
I GY+ G ++F M L++G SP + ++ + C G G+ +H
Sbjct: 123 ICGYSRNGYECDAWKLFIVM-LQQG-FSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKS 180
Query: 238 GFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF-ETLDSKESLCIF 296
G + + V N+++ Y +C A+ F EM K T++WNT+I + ++ +E++ +F
Sbjct: 181 GLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVF 240
Query: 297 SLM 299
M
Sbjct: 241 KNM 243
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 129/244 (52%), Gaps = 2/244 (0%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ + L+ Y ++ A +F +M + +VAW +MI GY + ++ RM+ +G
Sbjct: 245 VNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEG 304
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
RP+ TL+++L AC R L G+ HG ++ + IYV+ +L+D+Y C ++ +
Sbjct: 305 TRPSQTTLTSILMACSRSRNLLHGKFIHGYVIR-SVVNADIYVNCSLIDLYFKCGEA-NL 362
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
A VF A SW +I+ Y G+ F + V+ QMV + +F+ + AC+
Sbjct: 363 AETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQ 422
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTL 280
+ + GKQ+H ++ +++ +++++LDMY +C EA + F + +KD ++W +
Sbjct: 423 LAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVM 482
Query: 281 IAGF 284
I+ +
Sbjct: 483 ISAY 486
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 131/245 (53%), Gaps = 4/245 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ + L+ Y + + +FDEM RDV +W +I+ + +A ++F RM G
Sbjct: 144 VASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSG 203
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
PN+ +L+ + AC L L G+ H VK G YV++AL+DMY C D ++
Sbjct: 204 FEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDE-YVNSALVDMYGKC-DCLEV 261
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
AR VF+ + K+ V+W ++I GY +GD+ + + +M++E S + + + AC+
Sbjct: 262 AREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSR 321
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTI-TWNT 279
+ + GK +H VI +++ V S++D+Y +C A+ A+ F + TQKD +WN
Sbjct: 322 SRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSK-TQKDVAESWNV 380
Query: 280 LIAGF 284
+I+ +
Sbjct: 381 MISSY 385
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 137/263 (52%), Gaps = 5/263 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHR-DVVAWTAMITGYTSCNHHSRAWKVFPRMLRD 99
L LI YF A +F+ R DV W ++++GY+ + +VF R+L
Sbjct: 41 LCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNC 100
Query: 100 GV-RPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSM 158
+ P++FT V+KA L F G + H L VK G + V ++L+ MYA +
Sbjct: 101 SICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYV-CDVVVASSLVGMYAK-FNLF 158
Query: 159 DRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSAC 218
+ + VF+++ ++ SW T+I+ + G+A L +F +M E + S ++A+SAC
Sbjct: 159 ENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISAC 218
Query: 219 ASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWN 278
+ + GK++H + GF+ + V ++++DMY +C C A++ F +M +K + WN
Sbjct: 219 SRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWN 278
Query: 279 TLIAGFETL-DSKESLCIFSLMV 300
++I G+ DSK + I + M+
Sbjct: 279 SMIKGYVAKGDSKSCVEILNRMI 301
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 108/202 (53%), Gaps = 14/202 (6%)
Query: 108 LSAVLKAC----KGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARM 163
L ++L+ C K LR + +L H + +G R + + +L+++Y TC D AR
Sbjct: 6 LLSLLRECTNSTKSLRRI---KLVHQRILTLGLR-RDVVLCKSLINVYFTCKDHCS-ARH 60
Query: 164 VFEDIVTKNAVS-WTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAVSACAS 220
VFE+ ++ V W +L++GY+ L VF+++ L P F+F + A +
Sbjct: 61 VFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRL-LNCSICVPDSFTFPNVIKAYGA 119
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTL 280
+G LG+ +H V+ G+ ++ V +S++ MY + + Q F EM ++D +WNT+
Sbjct: 120 LGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTV 179
Query: 281 IAGF-ETLDSKESLCIFSLMVS 301
I+ F ++ +++++L +F M S
Sbjct: 180 ISCFYQSGEAEKALELFGRMES 201
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 7/126 (5%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L + L+ Y G+ +EA +F+ + +DVV+WT MI+ Y S A F M + G
Sbjct: 447 LLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFG 506
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
++P+ TL AVL AC G + GL K ++ S Y +++ Y+ D + R
Sbjct: 507 LKPDGVTLLAVLSACG-----HAGLIDEGL--KFFSQMRSKYGIEPIIEHYSCMIDILGR 559
Query: 161 ARMVFE 166
A + E
Sbjct: 560 AGRLLE 565
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 140/266 (52%), Gaps = 6/266 (2%)
Query: 39 TGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLR 98
T L ++ Y GS+++A +FD M R++V++T++ITGY+ + A +++ +ML+
Sbjct: 102 TILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQ 161
Query: 99 DGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSM 158
+ + P+ F +++KAC + G+ H +K+ + S + NAL+ MY + M
Sbjct: 162 EDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLES-SSHLIAQNALIAMYVR-FNQM 219
Query: 159 DRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAVS 216
A VF I K+ +SW+++I G++ G F L ++M L G P + F ++
Sbjct: 220 SDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEM-LSFGVFHPNEYIFGSSLK 278
Query: 217 ACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTIT 276
AC+S+ G Q+H I N S+ DMY RC + A++ F ++ + DT +
Sbjct: 279 ACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTAS 338
Query: 277 WNTLIAGFETLD-SKESLCIFSLMVS 301
WN +IAG + E++ +FS M S
Sbjct: 339 WNVIIAGLANNGYADEAVSVFSQMRS 364
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 121/251 (48%), Gaps = 4/251 (1%)
Query: 53 GSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVL 112
G + A +FD++ D +W +I G + + A VF +M G P+A +L ++L
Sbjct: 319 GFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL 378
Query: 113 KACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTK- 171
A AL G H +K G + + V N+L+ MY C D + +FED
Sbjct: 379 CAQTKPMALSQGMQIHSYIIKWGFL-ADLTVCNSLLTMYTFCSD-LYCCFNLFEDFRNNA 436
Query: 172 NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLH 231
++VSW T++T LR+F+ M++ E E + + C + S LG Q+H
Sbjct: 437 DSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVH 496
Query: 232 AAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF-ETLDSK 290
+ G + N ++DMY +C +A++ F M +D ++W+TLI G+ ++ +
Sbjct: 497 CYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGE 556
Query: 291 ESLCIFSLMVS 301
E+L +F M S
Sbjct: 557 EALILFKEMKS 567
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 100/181 (55%), Gaps = 2/181 (1%)
Query: 107 TLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFE 166
T +++ AC R+L G H + + +I ++N ++ MY C S+ AR VF+
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTI-LNNHILSMYGKC-GSLRDAREVFD 126
Query: 167 DIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGIL 226
+ +N VS+T++ITGY+ G +R++ +M+ E+ F+F + ACAS L
Sbjct: 127 FMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGL 186
Query: 227 GKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFET 286
GKQLHA VI S+L N+++ MY R S+A + F + KD I+W+++IAGF
Sbjct: 187 GKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQ 246
Query: 287 L 287
L
Sbjct: 247 L 247
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 18/186 (9%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ LI Y GS+ +A +FD M +RDVV+W+ +I GY A +F M G
Sbjct: 510 IKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAG 569
Query: 101 VRPNAFTLSAVLKAC-------KGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYAT 153
+ PN T VL AC +GL+ + HG++ + + ++D+ A
Sbjct: 570 IEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGIS-------PTKEHCSCVVDLLAR 622
Query: 154 CCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSI 213
+ R + E + + V W TL++ +G+ + ++ ++ PF+ +
Sbjct: 623 AGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENIL----KIDPFNSTA 678
Query: 214 AVSACA 219
V C+
Sbjct: 679 HVLLCS 684
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 135/253 (53%), Gaps = 4/253 (1%)
Query: 49 YFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTL 108
Y G ++ A LFD M R+ V+W M++G + + F +M G++P++F +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 109 SAVLKACKGLRALF-CGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFED 167
++++ AC ++F G HG K G S +YV A++ +Y + +R VFE+
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLL-SDVYVSTAILHLYGVY-GLVSCSRKVFEE 119
Query: 168 IVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILG 227
+ +N VSWT+L+ GY+ +G+ + +++ M E + S S+ +S+C + LG
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 179
Query: 228 KQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF-ET 286
+Q+ V+ G +S L V NS++ M A F +M+++DTI+WN++ A + +
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239
Query: 287 LDSKESLCIFSLM 299
+ES IFSLM
Sbjct: 240 GHIEESFRIFSLM 252
Score = 117 bits (293), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 132/260 (50%), Gaps = 3/260 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ LI G++ A+ +FD+M+ RD ++W ++ Y H ++++F M R
Sbjct: 197 VENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH 256
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
N+ T+S +L + G HGL VK+G S + V N L+ MYA S++
Sbjct: 257 DEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFD-SVVCVCNTLLRMYAGAGRSVE- 314
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
A +VF+ + TK+ +SW +L+ + + G + L + M+ ++ +F+ A++AC +
Sbjct: 315 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFT 374
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTL 280
G+ LH V+ G N + N+++ MY + SE+++ +M ++D + WN L
Sbjct: 375 PDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNAL 434
Query: 281 IAGF-ETLDSKESLCIFSLM 299
I G+ E D ++L F M
Sbjct: 435 IGGYAEDEDPDKALAAFQTM 454
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 127/258 (49%), Gaps = 6/258 (2%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
++T ++ Y G + + +F+EM R+VV+WT+++ GY+ ++ M +G
Sbjct: 96 VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEG 155
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
V N ++S V+ +C L+ G G VK G S + V+N+L+ M + + +D
Sbjct: 156 VGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLE-SKLAVENSLISMLGSMGN-VDY 213
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
A +F+ + ++ +SW ++ Y G R+F M E++ + S +S
Sbjct: 214 ANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH 273
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTL 280
V G+ +H V+ GF S + V N++L MY + EA F +M KD I+WN+L
Sbjct: 274 VDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSL 333
Query: 281 IAGF----ETLDSKESLC 294
+A F +LD+ LC
Sbjct: 334 MASFVNDGRSLDALGLLC 351
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 115/256 (44%), Gaps = 13/256 (5%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
L+ Y G + E+ + +M RDVVAW A+I GY +A F M +GV N
Sbjct: 403 LVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSN 462
Query: 105 AFTLSAVLKACKGLRALFCGELA------HGLAVKIGARGSSIYVDNALMDMYATCCDSM 158
T+ +VL AC L G+L H V G S +V N+L+ MYA C D +
Sbjct: 463 YITVVSVLSAC-----LLPGDLLERGKPLHAYIVSAGFE-SDEHVKNSLITMYAKCGD-L 515
Query: 159 DRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSAC 218
++ +F + +N ++W ++ H G L++ +M L FSFS +SA
Sbjct: 516 SSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAA 575
Query: 219 ASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWN 278
A + G+QLH + GF+ + + N+ DMY +C E + + +WN
Sbjct: 576 AKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWN 635
Query: 279 TLIAGFETLDSKESLC 294
LI+ E +C
Sbjct: 636 ILISALGRHGYFEEVC 651
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 137/260 (52%), Gaps = 6/260 (2%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
T I Y G I+ LF E D+VA+ AMI GYTS + +F ++ G R
Sbjct: 260 TGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAR 319
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
+ TL +++ L ++ HG +K S V AL +Y+ + ++ AR
Sbjct: 320 LRSSTLVSLVPVSGHLMLIYA---IHGYCLKSNFL-SHASVSTALTTVYSKL-NEIESAR 374
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVG 222
+F++ K+ SW +I+GYT G + +FR+M E +P + + +SACA +G
Sbjct: 375 KLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLG 434
Query: 223 SGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIA 282
+ LGK +H V + F+S++ V +++ MY +C +EA++ F MT+K+ +TWNT+I+
Sbjct: 435 ALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMIS 494
Query: 283 GFETL-DSKESLCIFSLMVS 301
G+ +E+L IF M++
Sbjct: 495 GYGLHGQGQEALNIFYEMLN 514
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 122/245 (49%), Gaps = 4/245 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
++T L Y I+ A LFDE + + +W AMI+GYT A +F M +
Sbjct: 356 VSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSE 415
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
PN T++ +L AC L AL G+ H L V+ SSIYV AL+ MYA C S+
Sbjct: 416 FSPNPVTITCILSACAQLGALSLGKWVHDL-VRSTDFESSIYVSTALIGMYAK-CGSIAE 473
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
AR +F+ + KN V+W T+I+GY G L +F +M+ +P +F + AC+
Sbjct: 474 ARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSH 533
Query: 221 VGSGILGKQLHAAVIN-HGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT-QKDTITWN 278
G G ++ ++I+ +GF+ ++ ++D+ R A QF M+ + + W
Sbjct: 534 AGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWE 593
Query: 279 TLIAG 283
TL+
Sbjct: 594 TLLGA 598
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 114/245 (46%), Gaps = 6/245 (2%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L ++++K YF +++A +FD M +D + W MI+GY + + +VF ++ +
Sbjct: 156 LGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINES 215
Query: 101 -VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD 159
R + TL +L A L+ L G H LA K G S YV + +Y+ C +
Sbjct: 216 CTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCY-SHDYVLTGFISLYSK-CGKIK 273
Query: 160 RARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACA 219
+F + + V++ +I GYT G+ L +F++++L L S VS
Sbjct: 274 MGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRS---STLVSLVP 330
Query: 220 SVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNT 279
G +L +H + F S+ V ++ +Y + A++ F E +K +WN
Sbjct: 331 VSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNA 390
Query: 280 LIAGF 284
+I+G+
Sbjct: 391 MISGY 395
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 119/265 (44%), Gaps = 6/265 (2%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRD- 99
L T L + D G+I A +F + DV + ++ G++ + VF + +
Sbjct: 54 LLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKST 113
Query: 100 GVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD 159
++PN+ T + + A G R G + HG AV G S + + + ++ MY D
Sbjct: 114 DLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGC-DSELLLGSNIVKMYFKFWRVED 172
Query: 160 RARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEE-GELSPFSFSIAVSAC 218
AR VF+ + K+ + W T+I+GY ++VFR ++ E L + + A
Sbjct: 173 -ARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAV 231
Query: 219 ASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWN 278
A + LG Q+H+ G S+ V+ + +Y +C F E + D + +N
Sbjct: 232 AELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYN 291
Query: 279 TLIAGFETLDSKE-SLCIF-SLMVS 301
+I G+ + E SL +F LM+S
Sbjct: 292 AMIHGYTSNGETELSLSLFKELMLS 316
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 150/316 (47%), Gaps = 45/316 (14%)
Query: 17 APSVVLHHRTQLNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMT-HRDVVAWTA 75
+PS+ LH ++ D KD TT ++ Y G L + M + +VA+ A
Sbjct: 200 SPSL-LHSARKVFDEILE-KDERSWTT-MMTGYVKNGYFDLGEELLEGMDDNMKLVAYNA 256
Query: 76 MITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIG 135
MI+GY + + A ++ RM+ G+ + FT +V++AC L G+ H ++
Sbjct: 257 MISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR-- 314
Query: 136 ARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYT---HRGDA--- 189
S + DN+L+ +Y C D AR +FE + K+ VSW L++GY H G+A
Sbjct: 315 REDFSFHFDNSLVSLYYKC-GKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLI 373
Query: 190 -----------------------FG--GLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
FG GL++F M E E ++FS A+ +CA +G+
Sbjct: 374 FKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAY 433
Query: 225 ILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIA-- 282
G+Q HA ++ GF S+L N+++ MY +C EA+Q F M D+++WN LIA
Sbjct: 434 CNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAAL 493
Query: 283 -----GFETLDSKESL 293
G E +D E +
Sbjct: 494 GQHGHGAEAVDVYEEM 509
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 144/304 (47%), Gaps = 48/304 (15%)
Query: 22 LHHRTQLNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDE--MTHRDVVAWTAMITG 79
L++ QL D P + T ++ Y G I A +F++ + RD V + AMITG
Sbjct: 65 LNYARQLFDEISEPDKIA--RTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITG 122
Query: 80 YTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELA----HGLAVKIG 135
++ N A +F +M +G +P+ FT ++VL GL + E H A+K G
Sbjct: 123 FSHNNDGYSAINLFCKMKHEGFKPDNFTFASVL---AGLALVADDEKQCVQFHAAALKSG 179
Query: 136 ARGSSIYVDNALMDMYATCCDS---MDRARMVFEDIVTKNAVSWTT-------------- 178
A G V NAL+ +Y+ C S + AR VF++I+ K+ SWTT
Sbjct: 180 A-GYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLG 238
Query: 179 ------------------LITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
+I+GY +RG L + R+MV EL F++ + ACA+
Sbjct: 239 EELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACAT 298
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTL 280
G LGKQ+HA V+ + NS++ +Y +C EA+ F +M KD ++WN L
Sbjct: 299 AGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNAL 357
Query: 281 IAGF 284
++G+
Sbjct: 358 LSGY 361
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 20/161 (12%)
Query: 161 ARMVFED--IVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSAC 218
AR VFE + ++ V + +ITG++H D + + +F +M E + F+F+ ++
Sbjct: 99 ARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGL 158
Query: 219 ASVGSGILG-KQLHAAVINHGFQSNLPVMNSILDMYCRCRCAS----EAKQFFCEMTQKD 273
A V Q HAA + G V N+++ +Y +C + A++ F E+ +KD
Sbjct: 159 ALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKD 218
Query: 274 TITWNTLIAGF-------------ETLDSKESLCIFSLMVS 301
+W T++ G+ E +D L ++ M+S
Sbjct: 219 ERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMIS 259
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 37/71 (52%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
LI Y G ++EA +F M D V+W A+I H + A V+ ML+ G+RP+
Sbjct: 458 LITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPD 517
Query: 105 AFTLSAVLKAC 115
TL VL AC
Sbjct: 518 RITLLTVLTAC 528
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 126/249 (50%), Gaps = 4/249 (1%)
Query: 53 GSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVL 112
G I++A LF M +D V+W AMI G A + F M G++ + + +VL
Sbjct: 219 GMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVL 277
Query: 113 KACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKN 172
AC GL A+ G+ H ++ + IYV +AL+DMY C + A+ VF+ + KN
Sbjct: 278 PACGGLGAINEGKQIHACIIRTNFQ-DHIYVGSALIDMYCKC-KCLHYAKTVFDRMKQKN 335
Query: 173 AVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHA 232
VSWT ++ GY G A +++F M + ++ A+SACA+V S G Q H
Sbjct: 336 VVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHG 395
Query: 233 AVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLD-SKE 291
I G + V NS++ +Y +C ++ + F EM +D ++W +++ + + E
Sbjct: 396 KAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVE 455
Query: 292 SLCIFSLMV 300
++ +F MV
Sbjct: 456 TIQLFDKMV 464
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 135/286 (47%), Gaps = 34/286 (11%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRD-GV 101
+L+ +Y G I E + F+++ RD V W +I GY+ A K + M+RD
Sbjct: 76 NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSA 135
Query: 102 RPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYAT-------- 153
TL +LK + G+ HG +K+G S + V + L+ MYA
Sbjct: 136 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFE-SYLLVGSPLLYMYANVGCISDAK 194
Query: 154 ----------------------CCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFG 191
C ++ A +F + K++VSW +I G G A
Sbjct: 195 KVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKE 253
Query: 192 GLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILD 251
+ FR+M ++ ++ + F + AC +G+ GKQ+HA +I FQ ++ V ++++D
Sbjct: 254 AIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALID 313
Query: 252 MYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF-ETLDSKESLCIF 296
MYC+C+C AK F M QK+ ++W ++ G+ +T ++E++ IF
Sbjct: 314 MYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIF 359
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 124/249 (49%), Gaps = 4/249 (1%)
Query: 36 KDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPR 95
+D + + LI Y + A T+FD M ++VV+WTAM+ GY A K+F
Sbjct: 302 QDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLD 361
Query: 96 MLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCC 155
M R G+ P+ +TL + AC + +L G HG A+ G + V N+L+ +Y C
Sbjct: 362 MQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLI-HYVTVSNSLVTLYGKCG 420
Query: 156 DSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAV 215
D D R+ F ++ ++AVSWT +++ Y G A +++F +MV + + + +
Sbjct: 421 DIDDSTRL-FNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVI 479
Query: 216 SACASVGSGILGKQLHAAVIN-HGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT-QKD 273
SAC+ G G++ + + +G ++ + ++D++ R EA +F M D
Sbjct: 480 SACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPD 539
Query: 274 TITWNTLIA 282
I W TL++
Sbjct: 540 AIGWTTLLS 548
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 89/189 (47%), Gaps = 15/189 (7%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
++ L+ Y G I ++ LF+EM RD V+WTAM++ Y ++F +M++ G
Sbjct: 408 VSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHG 467
Query: 101 VRPNAFTLSAVLKAC-------KGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYAT 153
++P+ TL+ V+ AC KG R +G+ IG + ++D+++
Sbjct: 468 LKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHY-------SCMIDLFSR 520
Query: 154 CCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSI 213
+ R + +A+ WTTL++ ++G+ G + + ++E P +++
Sbjct: 521 SGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIG-KWAAESLIELDPHHPAGYTL 579
Query: 214 AVSACASVG 222
S AS G
Sbjct: 580 LSSIYASKG 588
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 127 bits (320), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 89/264 (33%), Positives = 136/264 (51%), Gaps = 8/264 (3%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
++T LI +Y ++EA LF E + D+VAW AM+ GYT + + K+F M + G
Sbjct: 454 VSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQG 512
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
R + FTL+ V K C L A+ G+ H A+K G ++V + ++DMY C D M
Sbjct: 513 ERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSG-YDLDLWVSSGILDMYVKCGD-MSA 570
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
A+ F+ I + V+WTT+I+G G+ VF QM L G L P F+IA A AS
Sbjct: 571 AQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRL-MGVL-PDEFTIATLAKAS 628
Query: 221 VGSGIL--GKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWN 278
L G+Q+HA + ++ V S++DMY +C +A F + + WN
Sbjct: 629 SCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWN 688
Query: 279 TLIAGF-ETLDSKESLCIFSLMVS 301
++ G + + KE+L +F M S
Sbjct: 689 AMLVGLAQHGEGKETLQLFKQMKS 712
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 134/262 (51%), Gaps = 7/262 (2%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
++ LI Y A T+FD M+ RD+++W ++I G A +F ++LR G
Sbjct: 352 VSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCG 411
Query: 101 VRPNAFTLSAVLKACKGL-RALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD 159
++P+ +T+++VLKA L L + H A+KI S +V AL+D Y+ M
Sbjct: 412 LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDS-FVSTALIDAYSRN-RCMK 469
Query: 160 RARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELS-PFSFSIAVSAC 218
A ++FE + V+W ++ GYT D L++F ++ ++GE S F+ + C
Sbjct: 470 EAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLF-ALMHKQGERSDDFTLATVFKTC 527
Query: 219 ASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWN 278
+ + GKQ+HA I G+ +L V + ILDMY +C S A+ F + D + W
Sbjct: 528 GFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWT 587
Query: 279 TLIAG-FETLDSKESLCIFSLM 299
T+I+G E + + + +FS M
Sbjct: 588 TMISGCIENGEEERAFHVFSQM 609
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 108/253 (42%), Gaps = 35/253 (13%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
L+ Y G ++E LF+EM +RDVV W M+ Y A + G+ PN
Sbjct: 186 LVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPN 245
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
TL ++ AR S D + +A D+ + ++
Sbjct: 246 EITL------------------------RLLARISGDDSDAGQVKSFANGNDASSVSEII 281
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
F + ++ Y H G L+ F MV + E +F + ++ V S
Sbjct: 282 FRN----------KGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSL 331
Query: 225 ILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
LG+Q+H + G L V NS+++MYC+ R A+ F M+++D I+WN++IAG
Sbjct: 332 ALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGI 391
Query: 285 -ETLDSKESLCIF 296
+ E++C+F
Sbjct: 392 AQNGLEVEAVCLF 404
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 7/152 (4%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTS-----CNHHSRAWKVFPR 95
L +LI Y GS+ A +FD+M RD+V+W +++ Y + +A+ +F
Sbjct: 76 LINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRI 135
Query: 96 MLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCC 155
+ +D V + TLS +LK C ++ E HG A KIG G +V AL+++Y
Sbjct: 136 LRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDE-FVAGALVNIYLK-F 193
Query: 156 DSMDRARMVFEDIVTKNAVSWTTLITGYTHRG 187
+ +++FE++ ++ V W ++ Y G
Sbjct: 194 GKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMG 225
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 12/159 (7%)
Query: 142 YVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGD--------AFGGL 193
++ N L+ MY+ C S+ AR VF+ + ++ VSW +++ Y + AF
Sbjct: 75 FLINNLISMYSKC-GSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLF 133
Query: 194 RVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMY 253
R+ RQ V+ S + S + C G + H G + V +++++Y
Sbjct: 134 RILRQDVVYT---SRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIY 190
Query: 254 CRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLDSKES 292
+ E K F EM +D + WN ++ + + KE
Sbjct: 191 LKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEE 229
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 24/183 (13%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
T L+ Y GSI +A+ LF + ++ AW AM+ G ++F +M G++
Sbjct: 657 TSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIK 716
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNAL---MDMYATCCDSMD 159
P+ T VL AC GL + S++ D + ++ Y+ D++
Sbjct: 717 PDKVTFIGVLSACS----------HSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALG 766
Query: 160 RARMV--FEDIVTK-----NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFS 212
RA +V E+++ +A + TL+ +GD G RV +++ EL P S
Sbjct: 767 RAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLL----ELEPLDSS 822
Query: 213 IAV 215
V
Sbjct: 823 AYV 825
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 129/244 (52%), Gaps = 2/244 (0%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L +++ Y + S+++A LFDEM+ + V+ T MI+ Y +A +F ML G
Sbjct: 120 LQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASG 179
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
+P + + +LK+ RAL G H ++ G S+ ++ +++MY C +
Sbjct: 180 DKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGL-CSNTSIETGIVNMYVKC-GWLVG 237
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
A+ VF+ + K V+ T L+ GYT G A L++F +V E E F FS+ + ACAS
Sbjct: 238 AKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACAS 297
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTL 280
+ LGKQ+HA V G +S + V ++D Y +C A + F E+ + + ++W+ +
Sbjct: 298 LEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAI 357
Query: 281 IAGF 284
I+G+
Sbjct: 358 ISGY 361
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 128/265 (48%), Gaps = 4/265 (1%)
Query: 39 TGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLR 98
T + T ++ Y G + A +FD+M + VA T ++ GYT A K+F ++
Sbjct: 219 TSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVT 278
Query: 99 DGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSM 158
+GV ++F S VLKAC L L G+ H K+G S + V L+D Y C S
Sbjct: 279 EGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLE-SEVSVGTPLVDFYIK-CSSF 336
Query: 159 DRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGE-LSPFSFSIAVSA 217
+ A F++I N VSW+ +I+GY ++ F+ + + L+ F+++ A
Sbjct: 337 ESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQA 396
Query: 218 CASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITW 277
C+ + +G Q+HA I + ++++ MY +C C +A + F M D + W
Sbjct: 397 CSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAW 456
Query: 278 NTLIAGFETL-DSKESLCIFSLMVS 301
I+G ++ E+L +F MVS
Sbjct: 457 TAFISGHAYYGNASEALRLFEKMVS 481
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 119/244 (48%), Gaps = 5/244 (2%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRML-RDGV 101
T L+ Y S + A F E+ + V+W+A+I+GY + A K F + ++
Sbjct: 324 TPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAS 383
Query: 102 RPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRA 161
N+FT +++ +AC L G H A+K GS Y ++AL+ MY+ C +D A
Sbjct: 384 ILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQ-YGESALITMYSKC-GCLDDA 441
Query: 162 RMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASV 221
VFE + + V+WT I+G+ + G+A LR+F +MV + + +F ++AC+
Sbjct: 442 NEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHA 501
Query: 222 GSGILGKQ-LHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT-QKDTITWNT 279
G GK L + + + + ++D+Y R EA +F M + D ++W
Sbjct: 502 GLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKC 561
Query: 280 LIAG 283
++G
Sbjct: 562 FLSG 565
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 104/199 (52%), Gaps = 4/199 (2%)
Query: 87 SRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNA 146
+ A++ M + GV ++++ + +AC+ LR+L G L H +++G S+ + N
Sbjct: 65 NEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHD-RMRMGIENPSVLLQNC 123
Query: 147 LMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGEL 206
++ MY C S++ A +F+++ NAVS TT+I+ Y +G + +F M L G+
Sbjct: 124 VLQMYCE-CRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGM-LASGDK 181
Query: 207 SPFS-FSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQF 265
P S ++ + + + + G+Q+HA VI G SN + I++MY +C AK+
Sbjct: 182 PPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRV 241
Query: 266 FCEMTQKDTITWNTLIAGF 284
F +M K + L+ G+
Sbjct: 242 FDQMAVKKPVACTGLMVGY 260
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 90/175 (51%), Gaps = 11/175 (6%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
LI Y G + +A+ +F+ M + D+VAWTA I+G+ + S A ++F +M+ G++PN
Sbjct: 428 LITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPN 487
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVD--NALMDMYATCCDSMDRAR 162
+ T AVL AC A + H L + + +D + ++D+YA +D A
Sbjct: 488 SVTFIAVLTACS--HAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYAR-SGLLDEAL 544
Query: 163 MVFEDI-VTKNAVSWTTLITG-YTHRGDAFGGL--RVFRQMVLEE--GELSPFSF 211
+++ +A+SW ++G +TH+ G + RQ+ E+ G + PF+
Sbjct: 545 KFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNL 599
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 140/270 (51%), Gaps = 6/270 (2%)
Query: 34 RPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVF 93
R ++ L+T L+ Y A +FD+M ++ V+WTAMI+G + ++ +F
Sbjct: 180 RMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLF 239
Query: 94 PRMLRDGVRPNAFTLSAVLKACKGLR--ALFCGELAHGLAVKIGARGSSIYVDNALMDMY 151
M R+ +RPN TL +VL AC L + E+ HG + + G + A M MY
Sbjct: 240 RAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEI-HGFSFRHGCHADE-RLTAAFMTMY 297
Query: 152 ATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSF 211
C ++ +R++FE ++ V W+++I+GY GD + + QM E E + +
Sbjct: 298 CRC-GNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTL 356
Query: 212 SIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQ 271
VSAC + +H+ ++ GF S++ + N+++DMY +C S A++ F E+T+
Sbjct: 357 LAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTE 416
Query: 272 KDTITWNTLIAGFETL-DSKESLCIFSLMV 300
KD ++W+++I + E+L IF M+
Sbjct: 417 KDLVSWSSMINAYGLHGHGSEALEIFKGMI 446
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 91/182 (50%), Gaps = 2/182 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
LT + Y G++ + LF+ RDVV W++MI+GY S + +M ++G
Sbjct: 289 LTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEG 348
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
+ N+ TL A++ AC L H +K G S I + NAL+DMYA C S+
Sbjct: 349 IEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFM-SHILLGNALIDMYAKC-GSLSA 406
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
AR VF ++ K+ VSW+++I Y G L +F+ M+ E+ +F +SAC
Sbjct: 407 AREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNH 466
Query: 221 VG 222
G
Sbjct: 467 AG 468
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 119/264 (45%), Gaps = 4/264 (1%)
Query: 39 TGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLR 98
T ++ LI Y +FDEM HRD V++ ++I A K+ M
Sbjct: 82 TVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYF 141
Query: 99 DGVRPNAFTLSAVLKACKGL-RALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDS 157
G P + ++++L C + + + H L + S+ + AL+DMY D
Sbjct: 142 YGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLK-FDD 200
Query: 158 MDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSA 217
A VF+ + KN VSWT +I+G + G+ +FR M E + + + A
Sbjct: 201 HAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPA 260
Query: 218 CASVGSG-ILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTIT 276
C + G L K++H HG ++ + + + MYCRC S ++ F +D +
Sbjct: 261 CVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVM 320
Query: 277 WNTLIAGF-ETLDSKESLCIFSLM 299
W+++I+G+ ET D E + + + M
Sbjct: 321 WSSMISGYAETGDCSEVMNLLNQM 344
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 124 bits (312), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 122/226 (53%), Gaps = 3/226 (1%)
Query: 60 TLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG-VRPNAFTLSAVLKACKGL 118
++F M +R++ +W +I ++ S++ +F RM R+ VRP+ FTL +L+AC
Sbjct: 88 SVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSAS 147
Query: 119 RALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTT 178
R G+L H L +K+G SS++V +AL+ MY + AR +F+D+ +++V +T
Sbjct: 148 REAKSGDLIHVLCLKLGF-SSSLFVSSALVIMYVD-MGKLLHARKLFDDMPVRDSVLYTA 205
Query: 179 LITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHG 238
+ GY +G+A GL +FR+M L + AC +G+ GK +H I
Sbjct: 206 MFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRC 265
Query: 239 FQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
L + N+I DMY +C A F M+++D I+W++LI G+
Sbjct: 266 SCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGY 311
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 118/247 (47%), Gaps = 9/247 (3%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+++ L+ Y D G + A LFD+M RD V +TAM GY +F M G
Sbjct: 171 VSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSG 230
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVD--NALMDMYATCCDSM 158
++ + ++L AC L AL G+ HG ++ R S + ++ NA+ DMY C +
Sbjct: 231 FALDSVVMVSLLMACGQLGALKHGKSVHGWCIR---RCSCLGLNLGNAITDMYVK-CSIL 286
Query: 159 DRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSAC 218
D A VF ++ ++ +SW++LI GY GD ++F +M+ E E + +F +SAC
Sbjct: 287 DYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSAC 346
Query: 219 ASVGSGILGKQLHAAVIN-HGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK-DTIT 276
A G + L+ ++ + L S+ D R EA++F +M K D
Sbjct: 347 AH-GGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAV 405
Query: 277 WNTLIAG 283
+++G
Sbjct: 406 MGAVLSG 412
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 21/156 (13%)
Query: 55 IQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKA 114
+ AHT+F M+ RDV++W+++I GY ++K+F ML++G+ PNA T VL A
Sbjct: 286 LDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSA 345
Query: 115 CKGLRALFCGELAHGLAVK---IGARGSSIYVDNALMDMYATCCDSMDRARMV------F 165
C AHG V+ + R Y + YA+ D M RA ++
Sbjct: 346 C-----------AHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFL 394
Query: 166 EDIVTK-NAVSWTTLITGYTHRGDAFGGLRVFRQMV 200
ED+ K + +++G G+ G RV R+++
Sbjct: 395 EDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELI 430
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 131/264 (49%), Gaps = 5/264 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L T LI + G I A +FD++ + W A+I GY+ NH A ++ M
Sbjct: 55 LITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLAR 114
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
V P++FT +LKAC GL L G H ++G + ++V N L+ +YA C +
Sbjct: 115 VSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGF-DADVFVQNGLIALYAK-CRRLGS 172
Query: 161 ARMVFED--IVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSAC 218
AR VFE + + VSWT +++ Y G+ L +F QM + + + ++A
Sbjct: 173 ARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAF 232
Query: 219 ASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWN 278
+ G+ +HA+V+ G + ++ S+ MY +C + AK F +M + I WN
Sbjct: 233 TCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWN 292
Query: 279 TLIAGF-ETLDSKESLCIFSLMVS 301
+I+G+ + ++E++ +F M++
Sbjct: 293 AMISGYAKNGYAREAIDMFHEMIN 316
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 121/242 (50%), Gaps = 4/242 (1%)
Query: 45 LIKSYFDKGSIQEAHTLFD--EMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
LI Y + A T+F+ + R +V+WTA+++ Y A ++F +M + V+
Sbjct: 160 LIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVK 219
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
P+ L +VL A L+ L G H VK+G + +L MYA C + A+
Sbjct: 220 PDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLL-ISLNTMYAKC-GQVATAK 277
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVG 222
++F+ + + N + W +I+GY G A + +F +M+ ++ S + A+SACA VG
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 223 SGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIA 282
S + ++ V ++ ++ + ++++DM+ +C A+ F +D + W+ +I
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIV 397
Query: 283 GF 284
G+
Sbjct: 398 GY 399
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 112/248 (45%), Gaps = 11/248 (4%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L L Y G + A LFD+M +++ W AMI+GY + A +F M+
Sbjct: 259 LLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKD 318
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARG--SSIYVDNALMDMYATCCDSM 158
VRP+ ++++ + AC + +L E A + +G +++ +AL+DM+A C S+
Sbjct: 319 VRPDTISITSAISACAQVGSL---EQARSMYEYVGRSDYRDDVFISSALIDMFAK-CGSV 374
Query: 159 DRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAVS 216
+ AR+VF+ + ++ V W+ +I GY G A + ++R M E G + P +F +
Sbjct: 375 EGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM--ERGGVHPNDVTFLGLLM 432
Query: 217 ACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFF-CEMTQKDTI 275
AC G G + +H ++D+ R +A + C Q
Sbjct: 433 ACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVT 492
Query: 276 TWNTLIAG 283
W L++
Sbjct: 493 VWGALLSA 500
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%)
Query: 36 KDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPR 95
+D +++ LI + GS++ A +FD RDVV W+AMI GY A ++
Sbjct: 355 RDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRA 414
Query: 96 MLRDGVRPNAFTLSAVLKACK 116
M R GV PN T +L AC
Sbjct: 415 MERGGVHPNDVTFLGLLMACN 435
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 136/264 (51%), Gaps = 4/264 (1%)
Query: 37 DLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRM 96
DLT + + L Y GS++E++ LF + +D W +MI+G+ + A +F M
Sbjct: 484 DLT-VGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEM 542
Query: 97 LRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCD 156
L DG P+ TL+AVL C +L G+ HG ++ G + + +AL++MY+ C
Sbjct: 543 LDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGI-DKGMDLGSALVNMYSKC-G 600
Query: 157 SMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVS 216
S+ AR V++ + + VS ++LI+GY+ G G +FR MV+ + F+ S +
Sbjct: 601 SLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILK 660
Query: 217 ACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTIT 276
A A LG Q+HA + G + V +S+L MY + + + F ++ D I
Sbjct: 661 AAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIA 720
Query: 277 WNTLIAGF-ETLDSKESLCIFSLM 299
W LIA + + + E+L +++LM
Sbjct: 721 WTALIASYAQHGKANEALQVYNLM 744
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 130/260 (50%), Gaps = 4/260 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
LT L+ Y + GS+ +A LFD + DVV+ MI+GY + + F +M G
Sbjct: 86 LTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLG 145
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
N + +V+ AC L+A EL +K+G + V++AL+D+++ D
Sbjct: 146 FEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEV-VESALIDVFSKNLRFED- 203
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
A VF D ++ N W T+I G + +F +M + + +++S ++ACAS
Sbjct: 204 AYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACAS 263
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTL 280
+ GK + A VI G + ++ V +I+D+Y +C +EA + F + ++W +
Sbjct: 264 LEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVM 322
Query: 281 IAGF-ETLDSKESLCIFSLM 299
++G+ ++ D+ +L IF M
Sbjct: 323 LSGYTKSNDAFSALEIFKEM 342
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 116/242 (47%), Gaps = 6/242 (2%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
LI + ++A+ +F + +V W +I G ++ + +F M +P+
Sbjct: 191 LIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPD 250
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
++T S+VL AC L L G++ +K GA ++V A++D+YA C M A V
Sbjct: 251 SYTYSSVLAACASLEKLRFGKVVQARVIKCGAE--DVFVCTAIVDLYAKC-GHMAEAMEV 307
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
F I + VSWT +++GYT DAF L +F++M E++ + + +SAC
Sbjct: 308 FSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMV 367
Query: 225 ILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM--TQKDTITWNTLIA 282
Q+HA V GF + V +++ MY + ++Q F ++ Q+ I N +I
Sbjct: 368 CEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV-NVMIT 426
Query: 283 GF 284
F
Sbjct: 427 SF 428
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 129/267 (48%), Gaps = 21/267 (7%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
T ++ Y G + EA +F + + VV+WT M++GYT N A ++F M GV
Sbjct: 289 TAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVE 348
Query: 103 PNAFTLSAVLKACKGLRALFC-GELAHGLAVKIGARGSSIYVDN----ALMDMYATCCDS 157
N T+++V+ AC G ++ C H K G Y+D+ AL+ MY+ D
Sbjct: 349 INNCTVTSVISAC-GRPSMVCEASQVHAWVFKSG-----FYLDSSVAAALISMYSKSGD- 401
Query: 158 MDRARMVFE---DIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA 214
+D + VFE DI +N V+ +IT ++ +R+F +M+ E FS
Sbjct: 402 IDLSEQVFEDLDDIQRQNIVN--VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSL 459
Query: 215 VSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDT 274
+S + LGKQ+H + G +L V +S+ +Y +C E+ + F + KD
Sbjct: 460 LSVLDCLN---LGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDN 516
Query: 275 ITWNTLIAGFETLDS-KESLCIFSLMV 300
W ++I+GF +E++ +FS M+
Sbjct: 517 ACWASMISGFNEYGYLREAIGLFSEML 543
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 113/247 (45%), Gaps = 8/247 (3%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L + L+ Y GS++ A ++D + D V+ +++I+GY+ + +F M+ G
Sbjct: 588 LGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSG 647
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
++F +S++LKA G H KIG + V ++L+ MY+ S+D
Sbjct: 648 FTMDSFAISSILKAAALSDESSLGAQVHAYITKIGL-CTEPSVGSSLLTMYSKF-GSIDD 705
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
F I + ++WT LI Y G A L+V+ M + + +F +SAC+
Sbjct: 706 CCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSH 765
Query: 221 VGSGILGK---QLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK-DTIT 276
G++ + L++ V ++G + ++D R EA+ F M K D +
Sbjct: 766 --GGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALV 823
Query: 277 WNTLIAG 283
W TL+A
Sbjct: 824 WGTLLAA 830
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 125/255 (49%), Gaps = 12/255 (4%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L T L+ +Y G + A+ LFDEM RDV +W A+I G S N S A +++ RM +G
Sbjct: 146 LCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEG 205
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
+R + T+ A L AC L G++ G + G ++ V NA +DMY+ C +D+
Sbjct: 206 IRRSEVTVVAALGACSHL-----GDVKEGENIFHGYSNDNVIVSNAAIDMYSK-CGFVDK 259
Query: 161 ARMVFEDIV-TKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAVSA 217
A VFE K+ V+W T+ITG+ G+A L +F + LE+ + P S+ A++A
Sbjct: 260 AYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDK--LEDNGIKPDDVSYLAALTA 317
Query: 218 CASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQ-KDTIT 276
C G G + + G + N+ ++D+ R EA C M+ D +
Sbjct: 318 CRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVL 377
Query: 277 WNTLIAGFETLDSKE 291
W +L+ E E
Sbjct: 378 WQSLLGASEIYSDVE 392
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 7/247 (2%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ T L+ Y G ++ A LF + RDVV+W+AMI Y H A +F M+R
Sbjct: 337 VATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIH 396
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
++PNA TL++VL+ C G+ A G+ H A+K S + A++ MYA C
Sbjct: 397 IKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIE-SELETATAVISMYAK-CGRFSP 454
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA--VSAC 218
A FE + K+AV++ L GYT GDA V++ M L + P S ++ + C
Sbjct: 455 ALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLH--GVCPDSRTMVGMLQTC 512
Query: 219 ASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT-QKDTITW 277
A G ++ +I HGF S V +++++M+ +C + A F + +K T++W
Sbjct: 513 AFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSW 572
Query: 278 NTLIAGF 284
N ++ G+
Sbjct: 573 NIMMNGY 579
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 133/248 (53%), Gaps = 11/248 (4%)
Query: 42 TTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGV 101
T +I Y G A F+ + +D VA+ A+ GYT ++A+ V+ M GV
Sbjct: 439 ATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGV 498
Query: 102 RPNAFTLSAVLKACKGLRALFCGELAHGLAV--KIGARG--SSIYVDNALMDMYATCCDS 157
P++ T+ +L+ C FC + A G V +I G S +V +AL++M+ T CD+
Sbjct: 499 CPDSRTMVGMLQTCA-----FCSDYARGSCVYGQIIKHGFDSECHVAHALINMF-TKCDA 552
Query: 158 MDRARMVFEDI-VTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVS 216
+ A ++F+ K+ VSW ++ GY G A + FRQM +E+ + + +F V
Sbjct: 553 LAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVR 612
Query: 217 ACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTIT 276
A A + + +G +H+++I GF S PV NS++DMY +C +++ F E++ K ++
Sbjct: 613 AAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVS 672
Query: 277 WNTLIAGF 284
WNT+++ +
Sbjct: 673 WNTMLSAY 680
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 109/228 (47%), Gaps = 5/228 (2%)
Query: 58 AHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRD-GVRPNAFTLSAVLKACK 116
+ +FD + VV W +MI GYT H A F M + G+ P+ ++ + LKAC
Sbjct: 52 SRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACA 111
Query: 117 GLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSW 176
G G H L ++G S +Y+ AL++MY D + AR VF+ + K+ V+W
Sbjct: 112 GSMDFKKGLRIHDLIAEMGLE-SDVYIGTALVEMYCKARD-LVSARQVFDKMHVKDVVTW 169
Query: 177 TTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVIN 236
T+++G G + L +F M ++ S + A + + + + LH VI
Sbjct: 170 NTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIK 229
Query: 237 HGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
GF + ++DMYC C A+ F E+ +KD +W T++A +
Sbjct: 230 KGFI--FAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAY 275
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 114/245 (46%), Gaps = 4/245 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ T L++ Y + A +FD+M +DVV W M++G S A +F M
Sbjct: 137 IGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCC 196
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
V + +L ++ A L HGL +K +G + L+DMY C D +
Sbjct: 197 VDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIK---KGFIFAFSSGLIDMYCNCAD-LYA 252
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
A VFE++ K+ SW T++ Y H G L +F M + ++ + + A+ A A
Sbjct: 253 AESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAY 312
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTL 280
VG + G +H + G ++ V S++ MY +C A+Q F + +D ++W+ +
Sbjct: 313 VGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAM 372
Query: 281 IAGFE 285
IA +E
Sbjct: 373 IASYE 377
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 90/182 (49%), Gaps = 10/182 (5%)
Query: 104 NAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARM 163
N L +L+ CK R L HG + G + N L++ Y+ D +R+
Sbjct: 4 NYTNLLLMLRECKNFRCLL---QVHGSLIVSGLKPH-----NQLINAYSLF-QRQDLSRV 54
Query: 164 VFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEG-ELSPFSFSIAVSACASVG 222
+F+ + V W ++I GYT G L F M E+G + +SF+ A+ ACA
Sbjct: 55 IFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSM 114
Query: 223 SGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIA 282
G ++H + G +S++ + ++++MYC+ R A+Q F +M KD +TWNT+++
Sbjct: 115 DFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVS 174
Query: 283 GF 284
G
Sbjct: 175 GL 176
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 108/242 (44%), Gaps = 9/242 (3%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMT-HRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRP 103
LI + ++ A LFD+ + V+W M+ GY A F +M + +P
Sbjct: 543 LINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQP 602
Query: 104 NAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARM 163
NA T +++A L AL G H ++ G S V N+L+DMYA C ++ +
Sbjct: 603 NAVTFVNIVRAAAELSALRVGMSVHSSLIQCGF-CSQTPVGNSLVDMYAKC-GMIESSEK 660
Query: 164 VFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAVSACASV 221
F +I K VSW T+++ Y G A + +F M +E EL P SF +SAC
Sbjct: 661 CFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSM--QENELKPDSVSFLSVLSACRHA 718
Query: 222 GSGILGKQLHAAV-INHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTI-TWNT 279
G GK++ + H ++ + ++D+ + EA + M K ++ W
Sbjct: 719 GLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGA 778
Query: 280 LI 281
L+
Sbjct: 779 LL 780
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 130/241 (53%), Gaps = 4/241 (1%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
LI Y G++++A +LF++M +D+++WT MI GY+ + A VF +M+ +G+ P+
Sbjct: 972 LINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPD 1031
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
T+S V+ AC L L G+ H ++ G +Y+ +AL+DMY+ C S++RA +V
Sbjct: 1032 EVTMSTVISACAHLGVLEIGKEVHMYTLQNGFV-LDVYIGSALVDMYSK-CGSLERALLV 1089
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
F ++ KN W ++I G G A L++F +M +E + + +F +AC G
Sbjct: 1090 FFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLV 1149
Query: 225 ILGKQLHAAVI-NHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT-QKDTITWNTLIA 282
G++++ ++I ++ SN+ ++ ++ + EA + M + + + W L+
Sbjct: 1150 DEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLD 1209
Query: 283 G 283
G
Sbjct: 1210 G 1210
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 123/261 (47%), Gaps = 44/261 (16%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ T LI Y G I+EA +FDEM RD +AWT M++ Y
Sbjct: 906 IQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAY-------------------- 945
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
R + + A+ LA ++ + + N L++ Y + +++
Sbjct: 946 ------------------RRVLDMDSANSLANQMSEKNEA--TSNCLINGYMGLGN-LEQ 984
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGEL-SPFSFSIAVSACA 219
A +F + K+ +SWTT+I GY+ + VF +M +EEG + + S +SACA
Sbjct: 985 AESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKM-MEEGIIPDEVTMSTVISACA 1043
Query: 220 SVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNT 279
+G +GK++H + +GF ++ + ++++DMY +C A F + +K+ WN+
Sbjct: 1044 HLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNS 1103
Query: 280 LIAGFETLD-SKESLCIFSLM 299
+I G ++E+L +F+ M
Sbjct: 1104 IIEGLAAHGFAQEALKMFAKM 1124
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 19/197 (9%)
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDS---MD 159
PN L ++K C + L E A +K +S+ D LM+ + T C S +D
Sbjct: 774 PN---LKKIIKQCSTPKLL---ESALAAMIK-----TSLNQDCRLMNQFITACTSFKRLD 822
Query: 160 RARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACA 219
A + N + L G+ L ++ +M+ + +SP S++ + A
Sbjct: 823 LAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDS--VSPSSYTYSSLVKA 880
Query: 220 SVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNT 279
S + G+ L A + GF ++ + +++D Y EA++ F EM ++D I W T
Sbjct: 881 SSFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTT 940
Query: 280 LIAGFE---TLDSKESL 293
+++ + +DS SL
Sbjct: 941 MVSAYRRVLDMDSANSL 957
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 126/265 (47%), Gaps = 9/265 (3%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWK---VFPRML 97
L T L+ YF G + A +FDE+ RD+V W AMI G H+ R W+ +F M+
Sbjct: 251 LKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLA---HNKRQWEALGLFRTMI 307
Query: 98 -RDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCD 156
+ + PN+ L+ +L ++AL G+ H +K +V + L+D+Y C D
Sbjct: 308 SEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGD 367
Query: 157 SMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVS 216
M R VF +NA+SWT L++GY G LR M E + + +
Sbjct: 368 -MASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLP 426
Query: 217 ACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTIT 276
CA + + GK++H + + F N+ ++ S++ MY +C + F + Q++
Sbjct: 427 VCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKA 486
Query: 277 WNTLIAGF-ETLDSKESLCIFSLMV 300
W +I + E D + + +F LM+
Sbjct: 487 WTAMIDCYVENCDLRAGIEVFRLML 511
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 118/247 (47%), Gaps = 12/247 (4%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
+ LI Y G + +F R+ ++WTA+++GY + +A + M ++G R
Sbjct: 356 SGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFR 415
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDN-----ALMDMYATCCDS 157
P+ T++ VL C LRA+ G+ H A+K ++++ N +LM MY+ C
Sbjct: 416 PDVVTIATVLPVCAELRAIKQGKEIHCYALK------NLFLPNVSLVTSLMVMYSKCGVP 469
Query: 158 MDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSA 217
R+ F+ + +N +WT +I Y D G+ VFR M+L + + ++
Sbjct: 470 EYPIRL-FDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTV 528
Query: 218 CASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITW 277
C+ + + LGK+LH ++ F+S V I+ MY +C A F + K ++TW
Sbjct: 529 CSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTW 588
Query: 278 NTLIAGF 284
+I +
Sbjct: 589 TAIIEAY 595
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 136/296 (45%), Gaps = 25/296 (8%)
Query: 22 LHHRTQLND-------SPFRPKDLTGLTTDLIKS---YFDKGSIQEA---HTLFDEMTHR 68
L+HR +D SP RP +T K + ++ + + H+ + HR
Sbjct: 22 LNHRPHRSDKDGAPAKSPIRPSRTRRPSTSPAKKPKPFRERDAFPSSLPLHSKNPYIIHR 81
Query: 69 DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAH 128
D I + N+ A + + + G+ NA T SA+L+AC ++L G+ H
Sbjct: 82 D-------IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVH 134
Query: 129 GLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGD 188
+ ++I S+ ++ L+ MY T C S+ A+ VF++ + N SW L+ G G
Sbjct: 135 -VHIRINGLESNEFLRTKLVHMY-TACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGK 192
Query: 189 AFGG--LRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVM 246
L F +M +L+ +S S + A + G + HA I +G +++ +
Sbjct: 193 KRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLK 252
Query: 247 NSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLDSK-ESLCIFSLMVS 301
S++DMY +C A++ F E+ ++D + W +IAG + E+L +F M+S
Sbjct: 253 TSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMIS 308
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 83/182 (45%), Gaps = 2/182 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L T L+ Y G + LFD + R+V AWTAMI Y +VF ML
Sbjct: 455 LVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSK 514
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
RP++ T+ VL C L+AL G+ HG +K S +V ++ MY C D +
Sbjct: 515 HRPDSVTMGRVLTVCSDLKALKLGKELHGHILK-KEFESIPFVSARIIKMYGKCGD-LRS 572
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
A F+ + K +++WT +I Y + F QMV + F+F+ +S C+
Sbjct: 573 ANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQ 632
Query: 221 VG 222
G
Sbjct: 633 AG 634
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 117/239 (48%), Gaps = 4/239 (1%)
Query: 46 IKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNA 105
+K F G + A LFDEM RDVV+W MI+G SC H +VF M R +RP
Sbjct: 77 LKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTE 136
Query: 106 FTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVF 165
FT S + +R GE HG A+ G ++ V N++MDMY D A VF
Sbjct: 137 FTFSILASLVTCVRH---GEQIHGNAICSGVSRYNLVVWNSVMDMYRR-LGVFDYALSVF 192
Query: 166 EDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGI 225
+ ++ VSW LI + G+ L F M E + ++ S+ VS C+ +
Sbjct: 193 LTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELS 252
Query: 226 LGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
GKQ A I GF SN V+ + +DM+ +C ++ + F E+ + D++ N++I +
Sbjct: 253 KGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSY 311
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 123/251 (49%), Gaps = 8/251 (3%)
Query: 53 GSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVL 112
G A ++F M RDVV+W +I + + A F M ++P+ +T+S V+
Sbjct: 183 GVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVV 242
Query: 113 KACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKN 172
C LR L G+ A L +K+G +SI V A +DM++ C + +D + +F ++ +
Sbjct: 243 SICSDLRELSKGKQALALCIKMGFLSNSI-VLGAGIDMFSKC-NRLDDSVKLFRELEKWD 300
Query: 173 AVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGIL--GKQL 230
+V ++I Y+ LR+F + + F+FS S +S+ + +L G +
Sbjct: 301 SVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFS---SVLSSMNAVMLDHGADV 357
Query: 231 HAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF-ETLDS 289
H+ VI GF + V S+++MY + A F + KD I WNT+I G +
Sbjct: 358 HSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRA 417
Query: 290 KESLCIFSLMV 300
ESL IF+ ++
Sbjct: 418 VESLAIFNQLL 428
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 4/135 (2%)
Query: 158 MDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSA 217
++ A +F+++ ++ VSW T+I+G G G+RVF M E + F+FSI S
Sbjct: 86 LNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASL 145
Query: 218 CASVGSGILGKQLHAAVINHGF-QSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTIT 276
V G +Q+H I G + NL V NS++DMY R A F M +D ++
Sbjct: 146 VTCVRHG---EQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVS 202
Query: 277 WNTLIAGFETLDSKE 291
WN LI +KE
Sbjct: 203 WNCLILSCSDSGNKE 217
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 7/212 (3%)
Query: 55 IQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKA 114
+ ++ LF E+ D V +MI Y+ A ++F + VRP+ FT S+VL +
Sbjct: 286 LDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSS 345
Query: 115 CKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAV 174
+ L G H L +K+G + V +LM+MY S+D A VF K+ +
Sbjct: 346 MNAV-MLDHGADVHSLVIKLGFDLDTA-VATSLMEMYFKT-GSVDLAMGVFAKTDGKDLI 402
Query: 175 SWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA--VSACASVGSGILGKQLHA 232
W T+I G A L +F Q+++ + L P ++ + AC G G Q+ +
Sbjct: 403 FWNTVIMGLARNSRAVESLAIFNQLLMNQS-LKPDRVTLMGILVACCYAGFVNEGIQIFS 461
Query: 233 AVIN-HGFQSNLPVMNSILDMYCRCRCASEAK 263
++ HG I+++ CR +EAK
Sbjct: 462 SMEKAHGVNPGNEHYACIIELLCRVGMINEAK 493
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 125/248 (50%), Gaps = 5/248 (2%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L +LI +Y + G A +FDEM R+ V+W +++GY+ H A M+++G
Sbjct: 38 LCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEG 97
Query: 101 VRPNAFTLSAVLKACK--GLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSM 158
+ N + +VL+AC+ G + G HGL K+ ++ V N L+ MY C S+
Sbjct: 98 IFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAV-VSNVLISMYWKCIGSV 156
Query: 159 DRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSF-SIAVSA 217
A F DI KN+VSW ++I+ Y+ GD R+F M + + ++F S+ +A
Sbjct: 157 GYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTA 216
Query: 218 CASVGSGI-LGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTIT 276
C+ + L +Q+ + G ++L V + ++ + + S A++ F +M ++ +T
Sbjct: 217 CSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVT 276
Query: 277 WNTLIAGF 284
N L+ G
Sbjct: 277 LNGLMVGL 284
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 122/249 (48%), Gaps = 4/249 (1%)
Query: 38 LTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRML 97
+ G+ L+ Y GSI +A +F MT +D V+W +MITG A + + M
Sbjct: 348 MVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMR 407
Query: 98 RDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDS 157
R + P +FTL + L +C L+ G+ HG ++K+G ++ V NALM +YA
Sbjct: 408 RHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGI-DLNVSVSNALMTLYAE-TGY 465
Query: 158 MDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRV-FRQMVLEEGELSPFSFSIAVS 216
++ R +F + + VSW ++I + V F +L+ +FS +S
Sbjct: 466 LNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLS 525
Query: 217 ACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQ-KDTI 275
A +S+ G LGKQ+H + + N+++ Y +C ++ F M + +D +
Sbjct: 526 AVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNV 585
Query: 276 TWNTLIAGF 284
TWN++I+G+
Sbjct: 586 TWNSMISGY 594
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 125/262 (47%), Gaps = 23/262 (8%)
Query: 39 TGLTTDL------IKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKV 92
+GL TDL + ++ GS+ A +F++M R+ V ++ G A K+
Sbjct: 237 SGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKL 296
Query: 93 FPRM--LRDGVRPNAFTL------SAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVD 144
F M + D V P ++ + L GL+ G HG + G + +
Sbjct: 297 FMDMNSMID-VSPESYVILLSSFPEYSLAEEVGLKK---GREVHGHVITTGLVDFMVGIG 352
Query: 145 NALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEG 204
N L++MYA C S+ AR VF + K++VSW ++ITG G + ++ M
Sbjct: 353 NGLVNMYAKC-GSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSM--RRH 409
Query: 205 ELSPFSFSI--AVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEA 262
++ P SF++ ++S+CAS+ LG+Q+H + G N+ V N+++ +Y +E
Sbjct: 410 DILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNEC 469
Query: 263 KQFFCEMTQKDTITWNTLIAGF 284
++ F M + D ++WN++I
Sbjct: 470 RKIFSSMPEHDQVSWNSIIGAL 491
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 125/262 (47%), Gaps = 5/262 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHH-SRAWKVFPRMLRD 99
++ L+ Y + G + E +F M D V+W ++I A F R
Sbjct: 452 VSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRA 511
Query: 100 GVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD 159
G + N T S+VL A L G+ HGLA+K + +NAL+ Y C + MD
Sbjct: 512 GQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEAT-TENALIACYGKCGE-MD 569
Query: 160 RARMVFEDIVTK-NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSAC 218
+F + + + V+W ++I+GY H L + M+ L F ++ +SA
Sbjct: 570 GCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAF 629
Query: 219 ASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWN 278
ASV + G ++HA + +S++ V ++++DMY +C A +FF M +++ +WN
Sbjct: 630 ASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWN 689
Query: 279 TLIAGFETL-DSKESLCIFSLM 299
++I+G+ +E+L +F M
Sbjct: 690 SMISGYARHGQGEEALKLFETM 711
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 120/248 (48%), Gaps = 25/248 (10%)
Query: 53 GSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTL-SAV 111
GS+ A F ++ ++ V+W ++I+ Y+ A+++F M DG RP +T S V
Sbjct: 154 GSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLV 213
Query: 112 LKAC-------KGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
AC + L + C GL + ++V + L+ +A S+ AR V
Sbjct: 214 TTACSLTEPDVRLLEQIMCTIQKSGLL-------TDLFVGSGLVSAFAKS-GSLSYARKV 265
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSA------C 218
F + T+NAV+ L+ G + ++F M ++SP S+ I +S+
Sbjct: 266 FNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN-SMIDVSPESYVILLSSFPEYSLA 324
Query: 219 ASVGSGILGKQLHAAVINHGFQSNL-PVMNSILDMYCRCRCASEAKQFFCEMTQKDTITW 277
VG G+++H VI G + + N +++MY +C ++A++ F MT KD+++W
Sbjct: 325 EEVGLK-KGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSW 383
Query: 278 NTLIAGFE 285
N++I G +
Sbjct: 384 NSMITGLD 391
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 8/243 (3%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHR-DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRP 103
LI Y G + +F M R D V W +MI+GY ++A + ML+ G R
Sbjct: 558 LIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRL 617
Query: 104 NAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARM 163
++F + VL A + L G H +V+ S + V +AL+DMY+ C +D A
Sbjct: 618 DSFMYATVLSAFASVATLERGMEVHACSVR-ACLESDVVVGSALVDMYSKC-GRLDYALR 675
Query: 164 VFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAVSACASV 221
F + +N+ SW ++I+GY G L++F M L +G+ P +F +SAC+
Sbjct: 676 FFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKL-DGQTPPDHVTFVGVLSACSHA 734
Query: 222 GSGILG-KQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK-DTITWNT 279
G G K + ++G + + + D+ R + + F +M K + + W T
Sbjct: 735 GLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRT 794
Query: 280 LIA 282
++
Sbjct: 795 VLG 797
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 131/273 (47%), Gaps = 39/273 (14%)
Query: 63 DEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKAC----KGL 118
++ T V+WT+ I T + A K F M GV PN T A+L C G
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 119 RALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTT 178
AL G+L HG A K+G + + V A++ MY+ +AR+VF+ + KN+V+W T
Sbjct: 89 EAL--GDLLHGYACKLGLDRNHVMVGTAIIGMYSKR-GRFKKARLVFDYMEDKNSVTWNT 145
Query: 179 LITGYTHRGDAFGGLRVFRQM-------------------VLEEGEL----------SPF 209
+I GY G ++F +M EE L P
Sbjct: 146 MIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPD 205
Query: 210 SFSI--AVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFC 267
+I A++AC ++G+ G +H V++ F++N+ V NS++D+YCRC C A+Q F
Sbjct: 206 YVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFY 265
Query: 268 EMTQKDTITWNTLIAGF-ETLDSKESLCIFSLM 299
M ++ ++WN++I GF ++ ESL F M
Sbjct: 266 NMEKRTVVSWNSVIVGFAANGNAHESLVYFRKM 298
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 94/178 (52%), Gaps = 2/178 (1%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
+I Y G + A +FD+M RD+++WTAMI G+ + A F M GV+P+
Sbjct: 146 MIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPD 205
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
+ A L AC L AL G H + + +++ V N+L+D+Y C ++ AR V
Sbjct: 206 YVAIIAALNACTNLGALSFGLWVHRYVLSQDFK-NNVRVSNSLIDLYCR-CGCVEFARQV 263
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVG 222
F ++ + VSW ++I G+ G+A L FR+M + + +F+ A++AC+ VG
Sbjct: 264 FYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVG 321
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 130/281 (46%), Gaps = 11/281 (3%)
Query: 21 VLHHR-TQLNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITG 79
V+H R + DSP P L LI Y + A + R+VV+WT++I+G
Sbjct: 27 VVHARIVKTLDSPPPP----FLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISG 82
Query: 80 YTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGS 139
H S A F M R+GV PN FT KA LR G+ H LAVK G R
Sbjct: 83 LAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCG-RIL 141
Query: 140 SIYVDNALMDMYATCCDS--MDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFR 197
++V + DMY C + D AR +F++I +N +W I+ G + F
Sbjct: 142 DVFVGCSAFDMY---CKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFI 198
Query: 198 QMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCR 257
+ +G + +F ++AC+ LG QLH V+ GF +++ V N ++D Y +C+
Sbjct: 199 EFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCK 258
Query: 258 CASEAKQFFCEMTQKDTITWNTLIAGFETLDSKESLCIFSL 298
++ F EM K+ ++W +L+A + E + L
Sbjct: 259 QIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYL 299
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 115/228 (50%), Gaps = 2/228 (0%)
Query: 57 EAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACK 116
+A LFDE+ R++ W A I+ + A + F R PN+ T A L AC
Sbjct: 161 DARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACS 220
Query: 117 GLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSW 176
L G HGL ++ G + + V N L+D Y C + + ++F ++ TKNAVSW
Sbjct: 221 DWLHLNLGMQLHGLVLRSGF-DTDVSVCNGLIDFYGKC-KQIRSSEIIFTEMGTKNAVSW 278
Query: 177 TTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVIN 236
+L+ Y + ++ + + E S F S +SACA + LG+ +HA +
Sbjct: 279 CSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVK 338
Query: 237 HGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
+ + V ++++DMY +C C +++Q F EM +K+ +T N+LI G+
Sbjct: 339 ACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGY 386
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 122/252 (48%), Gaps = 12/252 (4%)
Query: 39 TGLTTD------LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKV 92
+G TD LI Y I+ + +F EM ++ V+W +++ Y + +A +
Sbjct: 238 SGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVL 297
Query: 93 FPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYA 152
+ R +D V + F +S+VL AC G+ L G H AVK +I+V +AL+DMY
Sbjct: 298 YLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVE-RTIFVGSALVDMYG 356
Query: 153 TCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FS 210
C ++ + F+++ KN V+ +LI GY H+G L +F +M +P +
Sbjct: 357 K-CGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMT 415
Query: 211 FSIAVSACASVGSGILGKQLHAAVIN-HGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM 269
F +SAC+ G+ G ++ ++ + +G + + I+DM R A +F +M
Sbjct: 416 FVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKM 475
Query: 270 TQKDTIT-WNTL 280
+ TI+ W L
Sbjct: 476 PIQPTISVWGAL 487
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 88/179 (49%), Gaps = 1/179 (0%)
Query: 104 NAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARM 163
+A L +LK ++ G + H VK ++ N L++MY+ D + AR+
Sbjct: 5 SADALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKL-DHPESARL 63
Query: 164 VFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGS 223
V +N VSWT+LI+G G L F +M E + F+F A A AS+
Sbjct: 64 VLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRL 123
Query: 224 GILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIA 282
+ GKQ+HA + G ++ V S DMYC+ R +A++ F E+ +++ TWN I+
Sbjct: 124 PVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFIS 182
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 119/239 (49%), Gaps = 2/239 (0%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
L+ Y + G ++ A +FD M +RDV++W MI+GY + + A +F M+ + V +
Sbjct: 158 LLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLD 217
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
T+ ++L C L+ L G H L V+ G I V NAL++MY C MD AR V
Sbjct: 218 HATIVSMLPVCGHLKDLEMGRNVHKL-VEEKRLGDKIEVKNALVNMYLKC-GRMDEARFV 275
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
F+ + ++ ++WT +I GYT GD L + R M E + + + VS C
Sbjct: 276 FDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKV 335
Query: 225 ILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAG 283
GK LH + S++ + S++ MY +C+ + F ++ T W+ +IAG
Sbjct: 336 NDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAG 394
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 124/250 (49%), Gaps = 5/250 (2%)
Query: 53 GSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR--PNAFTLSA 110
G I A LF+EM ++++ +I Y + A VF RM+ +GV+ P+ +T
Sbjct: 63 GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPF 122
Query: 111 VLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVT 170
V KA L+++ G + HG ++ G YV NAL+ MY ++ AR VF+ +
Sbjct: 123 VAKAAGELKSMKLGLVVHGRILR-SWFGRDKYVQNALLAMYMNF-GKVEMARDVFDVMKN 180
Query: 171 KNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQL 230
++ +SW T+I+GY G L +F MV E +L + + C + +G+ +
Sbjct: 181 RDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNV 240
Query: 231 HAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF-ETLDS 289
H V + V N++++MY +C EA+ F M ++D ITW +I G+ E D
Sbjct: 241 HKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDV 300
Query: 290 KESLCIFSLM 299
+ +L + LM
Sbjct: 301 ENALELCRLM 310
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 12/250 (4%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ T LI Y + +F + W+A+I G S A +F RM R+
Sbjct: 356 IETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRRED 415
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
V PN TL+++L A L L H K G SS+ L+ +Y+ C +++
Sbjct: 416 VEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFM-SSLDAATGLVHVYSKC-GTLES 473
Query: 161 ARMVFEDIV----TKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVS 216
A +F I +K+ V W LI+GY GD L+VF +MV + +F+ A++
Sbjct: 474 AHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALN 533
Query: 217 ACASVGSGILGKQLHAAVINHGFQSNLPVMNS---ILDMYCRCRCASEAKQFFCEMTQKD 273
AC+ G G L ++ H L N I+D+ R EA + +
Sbjct: 534 ACSHSGLVEEGLTLFRFMLEH--YKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEP 591
Query: 274 TIT-WNTLIA 282
T T W L+A
Sbjct: 592 TSTVWGALLA 601
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 120 bits (302), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 136/269 (50%), Gaps = 26/269 (9%)
Query: 54 SIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLK 113
++ EA +FDEM RD V+W A+I + +F MLR + P+ FT ++LK
Sbjct: 432 ALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILK 491
Query: 114 ACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATC------------------- 154
AC G +L G H VK G +S V +L+DMY+ C
Sbjct: 492 ACTG-GSLGYGMEIHSSIVKSGMASNS-SVGCSLIDMYSKCGMIEEAEKIHSRFFQRANV 549
Query: 155 CDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFS 212
+M+ + + + VSW ++I+GY + + +F +M+ E ++P F+++
Sbjct: 550 SGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMM--EMGITPDKFTYA 607
Query: 213 IAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK 272
+ CA++ S LGKQ+HA VI QS++ + ++++DMY +C +++ F + ++
Sbjct: 608 TVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRR 667
Query: 273 DTITWNTLIAGF-ETLDSKESLCIFSLMV 300
D +TWN +I G+ +E++ +F M+
Sbjct: 668 DFVTWNAMICGYAHHGKGEEAIQLFERMI 696
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 122/240 (50%), Gaps = 2/240 (0%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
+I Y + +A++ F+ M RDVV+W +M++GY ++ +VF M R+G+ +
Sbjct: 120 MINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFD 179
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
T + +LK C L G HG+ V++G + + +AL+DMYA ++ R V
Sbjct: 180 GRTFAIILKVCSFLEDTSLGMQIHGIVVRVGC-DTDVVAASALLDMYAKGKRFVESLR-V 237
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
F+ I KN+VSW+ +I G L+ F++M +S ++ + +CA++
Sbjct: 238 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 297
Query: 225 ILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
LG QLHA + F ++ V + LDMY +C +A+ F + ++N +I G+
Sbjct: 298 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGY 357
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 128/258 (49%), Gaps = 23/258 (8%)
Query: 54 SIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLK 113
++Q+A LFD + + ++ AMITGY+ H +A +F R++ G+ + +LS V +
Sbjct: 331 NMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFR 390
Query: 114 ACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNA 173
AC ++ L G +GLA+K + + V NA +DMY C ++ A VF+++ ++A
Sbjct: 391 ACALVKGLSEGLQIYGLAIK-SSLSLDVCVANAAIDMYGK-CQALAEAFRVFDEMRRRDA 448
Query: 174 VSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAA 233
VSW +I + G + L +F M+ E F+F + AC GS G ++H++
Sbjct: 449 VSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSS 507
Query: 234 VINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDT------------------- 274
++ G SN V S++DMY +C EA++ Q+
Sbjct: 508 IVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEM 567
Query: 275 -ITWNTLIAGFETLDSKE 291
++WN++I+G+ + E
Sbjct: 568 CVSWNSIISGYVMKEQSE 585
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 120/250 (48%), Gaps = 9/250 (3%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
L+ Y E+ +F + ++ V+W+A+I G N S A K F M + +
Sbjct: 221 LLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVS 280
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
++VL++C L L G H A+K I V A +DMYA C D+M A+++
Sbjct: 281 QSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGI-VRTATLDMYAKC-DNMQDAQIL 338
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
F++ N S+ +ITGY+ F L +F +++ S S ACA V
Sbjct: 339 FDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGL 398
Query: 225 ILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIA-- 282
G Q++ I ++ V N+ +DMY +C+ +EA + F EM ++D ++WN +IA
Sbjct: 399 SEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAH 458
Query: 283 -----GFETL 287
G+ETL
Sbjct: 459 EQNGKGYETL 468
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 120/234 (51%), Gaps = 8/234 (3%)
Query: 53 GSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVL 112
G+++E + ++ V+W ++I+GY A +F RM+ G+ P+ FT + VL
Sbjct: 551 GTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVL 610
Query: 113 KACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKN 172
C L + G+ H +K + S +Y+ + L+DMY+ C D D +R++FE + ++
Sbjct: 611 DTCANLASAGLGKQIHAQVIKKELQ-SDVYICSTLVDMYSKCGDLHD-SRLMFEKSLRRD 668
Query: 173 AVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHA 232
V+W +I GY H G +++F +M+LE + + +F + ACA + G++ K L
Sbjct: 669 FVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHM--GLIDKGLEY 726
Query: 233 AVI---NHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT-QKDTITWNTLIA 282
+ ++G LP ++++D+ + A + EM + D + W TL+
Sbjct: 727 FYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLG 780
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 94/188 (50%), Gaps = 6/188 (3%)
Query: 96 MLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCC 155
M+ G RP F L+ +L+ R + K+ R + N +++ Y+
Sbjct: 74 MIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFD---KMPLR--DVVSWNKMINGYSKSN 128
Query: 156 DSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAV 215
D M +A F + ++ VSW ++++GY G++ + VF M E E +F+I +
Sbjct: 129 D-MFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIIL 187
Query: 216 SACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTI 275
C+ + LG Q+H V+ G +++ +++LDMY + + E+ + F + +K+++
Sbjct: 188 KVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSV 247
Query: 276 TWNTLIAG 283
+W+ +IAG
Sbjct: 248 SWSAIIAG 255
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ + L+ Y G + ++ +F++ RD V W AMI GY A ++F RM+ +
Sbjct: 640 ICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILEN 699
Query: 101 VRPNAFTLSAVLKAC-------KGLRALFCGELAHGL 130
++PN T ++L+AC KGL + + +GL
Sbjct: 700 IKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGL 736
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%)
Query: 206 LSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQF 265
+S +FS CA G+ LGKQ HA +I GF+ V+N +L +Y R A
Sbjct: 46 VSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMV 105
Query: 266 FCEMTQKDTITWNTLIAGF 284
F +M +D ++WN +I G+
Sbjct: 106 FDKMPLRDVVSWNKMINGY 124
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 124/258 (48%), Gaps = 32/258 (12%)
Query: 58 AHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR-PNAFTLSAVLKACK 116
A LF+++++ +V + ++I YT + + +++ ++LR P+ FT + K+C
Sbjct: 61 ATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCA 120
Query: 117 GLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCD-------------------- 156
L + + G+ HG K G R + +NAL+DMY D
Sbjct: 121 SLGSCYLGKQVHGHLCKFGPR-FHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWN 179
Query: 157 ----------SMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGEL 206
M +A+ +F ++ K VSWT +I+GYT G + FR+M L E
Sbjct: 180 SLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEP 239
Query: 207 SPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFF 266
S + +CA +GS LGK +H GF V N++++MY +C S+A Q F
Sbjct: 240 DEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLF 299
Query: 267 CEMTQKDTITWNTLIAGF 284
+M KD I+W+T+I+G+
Sbjct: 300 GQMEGKDVISWSTMISGY 317
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 121/244 (49%), Gaps = 4/244 (1%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
L+ Y G +++A LF M + +V+WTAMI+GYT + A F M G+ P+
Sbjct: 181 LLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPD 240
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
+L +VL +C L +L G+ H A + G + V NAL++MY+ C + +A +
Sbjct: 241 EISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQT-GVCNALIEMYSK-CGVISQAIQL 298
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
F + K+ +SW+T+I+GY + G+A G + F +M + + + +F +SAC+ VG
Sbjct: 299 FGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMW 358
Query: 225 ILG-KQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK-DTITWNTLIA 282
G + ++ + + ++D+ R A + M K D+ W +L++
Sbjct: 359 QEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLS 418
Query: 283 GFET 286
T
Sbjct: 419 SCRT 422
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 83/147 (56%), Gaps = 2/147 (1%)
Query: 156 DSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP-FSFSIA 214
+ MD A +F + N + ++I YTH +R+++Q++ + EL F+F
Sbjct: 56 EDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFM 115
Query: 215 VSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDT 274
+CAS+GS LGKQ+H + G + ++ N+++DMY + +A + F EM ++D
Sbjct: 116 FKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDV 175
Query: 275 ITWNTLIAGFETLDS-KESLCIFSLMV 300
I+WN+L++G+ L K++ +F LM+
Sbjct: 176 ISWNSLLSGYARLGQMKKAKGLFHLML 202
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%)
Query: 39 TGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLR 98
TG+ LI+ Y G I +A LF +M +DV++W+ MI+GY + A + F M R
Sbjct: 276 TGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQR 335
Query: 99 DGVRPNAFTLSAVLKAC 115
V+PN T +L AC
Sbjct: 336 AKVKPNGITFLGLLSAC 352
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 130/258 (50%), Gaps = 16/258 (6%)
Query: 39 TGLTTD------LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKV 92
TGL D L+ Y ++ A +F M HRD+V+W ++T + H ++ +
Sbjct: 217 TGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQY 276
Query: 93 FPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIG-ARGSSIYVDNALMDMY 151
F M G + T S V+ AC + L GE HGL +K G + + + V N+++ MY
Sbjct: 277 FKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMY 336
Query: 152 ATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRG---DAFGGLRVFRQMVLEEGELSP 208
+ C D+ + A VFE++V ++ +S ++ G+ G +AFG + QM +
Sbjct: 337 SKCGDT-EAAETVFEELVCRDVISSNAILNGFAANGMFEEAFG---ILNQMQSVDKIQPD 392
Query: 209 FSFSIAV-SACASVGSGILGKQLHAAVINHGFQSN-LPVMNSILDMYCRCRCASEAKQFF 266
+ +++ S C + G+ +H + QS L V+NS++DMY +C ++A+ F
Sbjct: 393 IATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLF 452
Query: 267 CEMTQKDTITWNTLIAGF 284
T +D ++WN++I+ F
Sbjct: 453 KTTTHRDLVSWNSMISAF 470
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 122/245 (49%), Gaps = 4/245 (1%)
Query: 42 TTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGV 101
++ L+ Y G + + LFDE+ +DV+ W +MIT + A +F M+ G
Sbjct: 125 SSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGN 184
Query: 102 RPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRA 161
++ TL A L + H LA++ G G S + NALM++YA +++ A
Sbjct: 185 EFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDS-SLCNALMNLYAK-GENLSSA 242
Query: 162 RMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASV 221
VF + ++ VSW T++T G L+ F+ M E +FS +SAC+S+
Sbjct: 243 ECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSI 302
Query: 222 GSGILGKQLHAAVINHGF--QSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNT 279
LG+ LH VI G+ ++++ V NSI+ MY +C A+ F E+ +D I+ N
Sbjct: 303 EELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNA 362
Query: 280 LIAGF 284
++ GF
Sbjct: 363 ILNGF 367
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 111/242 (45%), Gaps = 9/242 (3%)
Query: 53 GSIQEAHTLFDEMTH-RDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG-VRPNAFTLSA 110
G + A + M+ RD+ +W ++I+G S HH + + F M R+G +R + TL
Sbjct: 527 GDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLG 586
Query: 111 VLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVT 170
+ A L + G HGLA+K R + N L+ MY C D ++ A VF I
Sbjct: 587 TISASGNLGLVLQGRCFHGLAIK-SLRELDTQLQNTLITMYGRCKD-IESAVKVFGLISD 644
Query: 171 KNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQL 230
N SW +I+ + ++FR + LE E++ F +SA +GS G Q
Sbjct: 645 PNLCSWNCVISALSQNKAGREVFQLFRNLKLEPNEIT---FVGLLSASTQLGSTSYGMQA 701
Query: 231 HAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIA--GFETLD 288
H +I GFQ+N V +++DMY C + F WN++I+ GF +
Sbjct: 702 HCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMG 761
Query: 289 SK 290
K
Sbjct: 762 EK 763
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 119/257 (46%), Gaps = 24/257 (9%)
Query: 31 SPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAW 90
S + P+ + +I Y G + A T+F+E+ RDV++ A++ G+ + A+
Sbjct: 318 SGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAF 377
Query: 91 KVFPRMLR-DGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMD 149
+ +M D ++P+ T+ ++ C L G HG V++ + ++ V N+++D
Sbjct: 378 GILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVID 437
Query: 150 MYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPF 209
MY C +A ++F+ ++ VSW ++I+ ++ G +F++ V+ E S F
Sbjct: 438 MYGK-CGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKE-VVSEYSCSKF 495
Query: 210 SFSIA---VSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFF 266
S S +++C S S I GK +H L + + + R SE
Sbjct: 496 SLSTVLAILTSCDSSDSLIFGKSVHCW---------LQKLGDLTSAFLRLETMSET---- 542
Query: 267 CEMTQKDTITWNTLIAG 283
+D +WN++I+G
Sbjct: 543 -----RDLTSWNSVISG 554
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 110/249 (44%), Gaps = 27/249 (10%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ +I Y G +A LF THRD+V+W +MI+ ++ +A +F ++ +
Sbjct: 431 VINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSE- 489
Query: 101 VRPNAFTLS---AVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDS 157
+ F+LS A+L +C +L G+ H K+G S+
Sbjct: 490 YSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFL--------------- 534
Query: 158 MDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSI--AV 215
R + E T++ SW ++I+G G LR F+ M EG++ ++ +
Sbjct: 535 --RLETMSE---TRDLTSWNSVISGCASSGHHLESLRAFQAMS-REGKIRHDLITLLGTI 588
Query: 216 SACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTI 275
SA ++G + G+ H I + + + N+++ MY RC+ A + F ++ +
Sbjct: 589 SASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLC 648
Query: 276 TWNTLIAGF 284
+WN +I+
Sbjct: 649 SWNCVISAL 657
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 132/247 (53%), Gaps = 9/247 (3%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDV--VAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+L + Y ++ A +FDE+ H + +AW MI Y S + +A ++ +ML G
Sbjct: 39 VNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSG 98
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
VRP +T VLKAC GLRA+ G+L H V + +YV AL+D YA C + ++
Sbjct: 99 VRPTKYTYPFVLKACAGLRAIDDGKLIHS-HVNCSDFATDMYVCTALVDFYAKCGE-LEM 156
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
A VF+++ ++ V+W +I+G++ + +F M +G LSP + S V +
Sbjct: 157 AIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDG-LSP-NLSTIVGMFPA 214
Query: 221 VG-SGIL--GKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITW 277
+G +G L GK +H GF ++L V ILD+Y + +C A++ F +K+ +TW
Sbjct: 215 LGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTW 274
Query: 278 NTLIAGF 284
+ +I G+
Sbjct: 275 SAMIGGY 281
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 122/244 (50%), Gaps = 5/244 (2%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLR-DGV 101
T L+ Y G ++ A +FDEM RD+VAW AMI+G++ + +F M R DG+
Sbjct: 142 TALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGL 201
Query: 102 RPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRA 161
PN T+ + A AL G+ HG ++G + + V ++D+YA + A
Sbjct: 202 SPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGF-SNDLVVKTGILDVYAKS-KCIIYA 259
Query: 162 RMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEE--GELSPFSFSIAVSACA 219
R VF+ KN V+W+ +I GY VF QM++ + ++P + + + CA
Sbjct: 260 RRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCA 319
Query: 220 SVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNT 279
G G+ +H + GF +L V N+I+ Y + +A + F E+ KD I++N+
Sbjct: 320 RFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNS 379
Query: 280 LIAG 283
LI G
Sbjct: 380 LITG 383
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 127/261 (48%), Gaps = 12/261 (4%)
Query: 37 DLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRM 96
DLT T +I Y GS+ +A F E+ +DV+++ ++ITG ++++F M
Sbjct: 342 DLTVQNT-IISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEM 400
Query: 97 LRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIG-ARGSSIYVDNALMDMYATCC 155
G+RP+ TL VL AC L AL G HG V G A +SI NALMDMY T C
Sbjct: 401 RTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSIC--NALMDMY-TKC 457
Query: 156 DSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSI-- 213
+D A+ VF+ + ++ VSW T++ G+ G L +F M +E ++P ++
Sbjct: 458 GKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSM--QETGVNPDEVTLLA 515
Query: 214 AVSACASVGSGILGKQLHAAVINHGFQ--SNLPVMNSILDMYCRCRCASEAKQFFCEMT- 270
+SAC+ G GKQL ++ F + N + D+ R EA F +M
Sbjct: 516 ILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPF 575
Query: 271 QKDTITWNTLIAGFETLDSKE 291
+ D TL++ T + E
Sbjct: 576 EPDIRVLGTLLSACWTYKNAE 596
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 90/177 (50%), Gaps = 3/177 (1%)
Query: 110 AVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIV 169
++L+ C R L G++ H +K SS V L +YA+C + ++ AR VF++I
Sbjct: 4 SLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASC-NEVELARHVFDEIP 62
Query: 170 TK--NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILG 227
N ++W +I Y A L ++ +M+ + +++ + ACA + + G
Sbjct: 63 HPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDG 122
Query: 228 KQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
K +H+ V F +++ V +++D Y +C A + F EM ++D + WN +I+GF
Sbjct: 123 KLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGF 179
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 124/243 (51%), Gaps = 4/243 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L + L+ Y D G ++ A+ +F+EM R+VV+WTAMI+G+ K++ +M +
Sbjct: 157 LGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKST 216
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
PN +T +A+L AC G AL G H + +G + S +++ N+L+ MY C D D
Sbjct: 217 SDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLK-SYLHISNSLISMYCKCGDLKDA 275
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEG-ELSPFSFSIAVSACA 219
R +F+ K+ VSW ++I GY G A + +F M+ + G + ++ +S+C
Sbjct: 276 FR-IFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCR 334
Query: 220 SVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK-DTITWN 278
G G++ + HG + L + ++D+ R EA + M K +++ W
Sbjct: 335 HAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWG 394
Query: 279 TLI 281
+L+
Sbjct: 395 SLL 397
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 116/204 (56%), Gaps = 3/204 (1%)
Query: 98 RDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDS 157
RDG +A+ LS+ +++C R G H LA+K G S +Y+ ++L+ +Y +
Sbjct: 113 RDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALK-GGFISDVYLGSSLVVLYRDSGE- 170
Query: 158 MDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSA 217
++ A VFE++ +N VSWT +I+G+ L+++ +M + + ++F+ +SA
Sbjct: 171 VENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSA 230
Query: 218 CASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITW 277
C G+ G+ +H ++ G +S L + NS++ MYC+C +A + F + + KD ++W
Sbjct: 231 CTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSW 290
Query: 278 NTLIAGFETLD-SKESLCIFSLMV 300
N++IAG+ + +++ +F LM+
Sbjct: 291 NSMIAGYAQHGLAMQAIELFELMM 314
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 103/218 (47%), Gaps = 23/218 (10%)
Query: 36 KDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPR 95
K ++ LI Y G +++A +FD+ +++DVV+W +MI GY +A ++F
Sbjct: 253 KSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFEL 312
Query: 96 ML-RDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNAL---MDMY 151
M+ + G +P+A T VL +C+ H VK G + ++ ++ L ++ Y
Sbjct: 313 MMPKSGTKPDAITYLGVLSSCR-----------HAGLVKEGRKFFNLMAEHGLKPELNHY 361
Query: 152 ATCCDSMDR------ARMVFEDIVTK-NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEG 204
+ D + R A + E++ K N+V W +L+ GD + G+R + ++ E
Sbjct: 362 SCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEP 421
Query: 205 ELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSN 242
+ + +A + ASVG + + + G ++N
Sbjct: 422 DCAATHVQLA-NLYASVGYWKEAATVRKLMKDKGLKTN 458
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 127/237 (53%), Gaps = 4/237 (1%)
Query: 65 MTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALF-C 123
M R+ V+W M++G + + F +M G++P++F +++++ AC ++F
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 124 GELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGY 183
G HG K G S +YV A++ +Y + +R VFE++ +N VSWT+L+ GY
Sbjct: 61 GVQVHGFVAKSGLL-SDVYVSTAILHLYGVY-GLVSCSRKVFEEMPDRNVVSWTSLMVGY 118
Query: 184 THRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNL 243
+ +G+ + +++ M E + S S+ +S+C + LG+Q+ V+ G +S L
Sbjct: 119 SDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKL 178
Query: 244 PVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF-ETLDSKESLCIFSLM 299
V NS++ M A F +M+++DTI+WN++ A + + +ES IFSLM
Sbjct: 179 AVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLM 235
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 132/260 (50%), Gaps = 3/260 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ LI G++ A+ +FD+M+ RD ++W ++ Y H ++++F M R
Sbjct: 180 VENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH 239
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
N+ T+S +L + G HGL VK+G S + V N L+ MYA S++
Sbjct: 240 DEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFD-SVVCVCNTLLRMYAGAGRSVE- 297
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
A +VF+ + TK+ +SW +L+ + + G + L + M+ ++ +F+ A++AC +
Sbjct: 298 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFT 357
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTL 280
G+ LH V+ G N + N+++ MY + SE+++ +M ++D + WN L
Sbjct: 358 PDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNAL 417
Query: 281 IAGF-ETLDSKESLCIFSLM 299
I G+ E D ++L F M
Sbjct: 418 IGGYAEDEDPDKALAAFQTM 437
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 127/258 (49%), Gaps = 6/258 (2%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
++T ++ Y G + + +F+EM R+VV+WT+++ GY+ ++ M +G
Sbjct: 79 VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEG 138
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
V N ++S V+ +C L+ G G VK G S + V+N+L+ M + + +D
Sbjct: 139 VGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLE-SKLAVENSLISMLGSMGN-VDY 196
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
A +F+ + ++ +SW ++ Y G R+F M E++ + S +S
Sbjct: 197 ANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH 256
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTL 280
V G+ +H V+ GF S + V N++L MY + EA F +M KD I+WN+L
Sbjct: 257 VDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSL 316
Query: 281 IAGF----ETLDSKESLC 294
+A F +LD+ LC
Sbjct: 317 MASFVNDGRSLDALGLLC 334
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 115/256 (44%), Gaps = 13/256 (5%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
L+ Y G + E+ + +M RDVVAW A+I GY +A F M +GV N
Sbjct: 386 LVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSN 445
Query: 105 AFTLSAVLKACKGLRALFCGELA------HGLAVKIGARGSSIYVDNALMDMYATCCDSM 158
T+ +VL AC L G+L H V G S +V N+L+ MYA C D +
Sbjct: 446 YITVVSVLSAC-----LLPGDLLERGKPLHAYIVSAGFE-SDEHVKNSLITMYAKCGD-L 498
Query: 159 DRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSAC 218
++ +F + +N ++W ++ H G L++ +M L FSFS +SA
Sbjct: 499 SSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAA 558
Query: 219 ASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWN 278
A + G+QLH + GF+ + + N+ DMY +C E + + +WN
Sbjct: 559 AKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWN 618
Query: 279 TLIAGFETLDSKESLC 294
LI+ E +C
Sbjct: 619 ILISALGRHGYFEEVC 634
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 120/234 (51%), Gaps = 16/234 (6%)
Query: 72 AWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLA 131
++ +++ Y C+ + + +G P+ FT V KAC + G+ HG+
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 132 VKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFG 191
K+G IYV N+L+ Y C +S + + VF ++ ++ VSWT +ITG+T G
Sbjct: 133 TKMGFY-DDIYVQNSLVHFYGVCGESRNACK-VFGEMPVRDVVSWTGIITGFTRTGLYKE 190
Query: 192 GLRVFRQMVLEEGELSPFSFSIAVSACASVGSG-----ILGKQLHAAVINHGFQSNLPVM 246
L F +M +E ++A C V SG LGK +H ++ +L
Sbjct: 191 ALDTFSKMDVEP--------NLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETG 242
Query: 247 NSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLD-SKESLCIFSLM 299
N+++DMY +C S+A + F E+ +KD ++WN++I+G + SKE++ +FSLM
Sbjct: 243 NALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLM 296
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 129/261 (49%), Gaps = 13/261 (4%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
L+ Y G + A +F EM RDVV+WT +ITG+T + A F +M V PN
Sbjct: 147 LVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM---DVEPN 203
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVD--NALMDMYATCCDSMDRAR 162
T VL + + L G+ HGL +K R S I ++ NAL+DMY C + + A
Sbjct: 204 LATYVCVLVSSGRVGCLSLGKGIHGLILK---RASLISLETGNALIDMYVKC-EQLSDAM 259
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAVSACAS 220
VF ++ K+ VSW ++I+G H + + +F M G + P + +SACAS
Sbjct: 260 RVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSG-IKPDGHILTSVLSACAS 318
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTL 280
+G+ G+ +H ++ G + + + +I+DMY +C A + F + K+ TWN L
Sbjct: 319 LGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNAL 378
Query: 281 IAGFETLD-SKESLCIFSLMV 300
+ G ESL F MV
Sbjct: 379 LGGLAIHGHGLESLRYFEEMV 399
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 126/275 (45%), Gaps = 36/275 (13%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTS-CNHHSRAWKVFPRMLRDGV 101
+++ Y G + A +FD M RDVV+W M+ GY N H W + R G+
Sbjct: 117 NNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALW-FYKEFRRSGI 175
Query: 102 RPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCD----- 156
+ N F+ + +L AC R L AHG V + S++ + +++D YA C
Sbjct: 176 KFNEFSFAGLLTACVKSRQLQLNRQAHG-QVLVAGFLSNVVLSCSIIDAYAKCGQMESAK 234
Query: 157 -------------------------SMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFG 191
M+ A +F ++ KN VSWT LI GY +G
Sbjct: 235 RCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNR 294
Query: 192 GLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILD 251
L +FR+M+ + F+FS + A AS+ S GK++H +I + N V++S++D
Sbjct: 295 ALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLID 354
Query: 252 MYCRCRCASEAKQFF--CEMTQKDTITWNTLIAGF 284
MY + +++ F C+ + D + WNT+I+
Sbjct: 355 MYSKSGSLEASERVFRICD-DKHDCVFWNTMISAL 388
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 124/263 (47%), Gaps = 11/263 (4%)
Query: 36 KDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPR 95
KD+ TT LI Y G ++ A LF EM ++ V+WTA+I GY +RA +F +
Sbjct: 243 KDIHIWTT-LISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRK 301
Query: 96 MLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCC 155
M+ GV+P FT S+ L A + +L G+ HG ++ R ++I + ++L+DMY+
Sbjct: 302 MIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVI-SSLIDMYSK-S 359
Query: 156 DSMDRARMVFEDIVTK-NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA 214
S++ + VF K + V W T+I+ G LR+ M+ + + + +
Sbjct: 360 GSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVI 419
Query: 215 VSACASVGSGILG-KQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT-QK 272
++AC+ G G + + + HG + ++D+ R C E + EM +
Sbjct: 420 LNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEP 479
Query: 273 DTITWNTL-----IAGFETLDSK 290
D WN + I G E L K
Sbjct: 480 DKHIWNAILGVCRIHGNEELGKK 502
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 105/236 (44%), Gaps = 30/236 (12%)
Query: 87 SRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNA 146
S+A + + G+R L+++L+ C ++L G+ H G + + + N
Sbjct: 28 SQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNH 87
Query: 147 LMDMYATCCDSMD------------------------------RARMVFEDIVTKNAVSW 176
L+ MY C +D RAR+VF+ + ++ VSW
Sbjct: 88 LIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSW 147
Query: 177 TTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVIN 236
T++ GY G+ L +++ + + FSF+ ++AC L +Q H V+
Sbjct: 148 NTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLV 207
Query: 237 HGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLDSKES 292
GF SN+ + SI+D Y +C AK+ F EMT KD W TLI+G+ L E+
Sbjct: 208 AGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEA 263
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 135/256 (52%), Gaps = 9/256 (3%)
Query: 34 RP-KDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKV 92
RP + + + + L+ Y G +A+ +F M +D+VAW ++I+G A KV
Sbjct: 402 RPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKV 461
Query: 93 FPRMLRD--GVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDM 150
F M D ++P++ +++V AC GL AL G HG +K G +++V ++L+D+
Sbjct: 462 FGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLV-LNVFVGSSLIDL 520
Query: 151 YATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFS 210
Y+ C + A VF + T+N V+W ++I+ Y+ + +F M L +G + P S
Sbjct: 521 YSKC-GLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLM-LSQG-IFPDS 577
Query: 211 FSI--AVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCE 268
SI + A +S S + GK LH + G S+ + N+++DMY +C + A+ F +
Sbjct: 578 VSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKK 637
Query: 269 MTQKDTITWNTLIAGF 284
M K ITWN +I G+
Sbjct: 638 MQHKSLITWNLMIYGY 653
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 120/269 (44%), Gaps = 11/269 (4%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTH-------RDVVAWTAMITGYTSCNHHSRAWKVF 93
+ T L+ Y G + A +FD + RDV W +MI GY F
Sbjct: 97 IATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCF 156
Query: 94 PRMLRDGVRPNAFTLSAVLKA-CK-GLRALFCGELAHGLAVKIGARGSSIYVDNALMDMY 151
RML GVRP+AF+LS V+ CK G G+ HG ++ + + ++ AL+DMY
Sbjct: 157 RRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLR-NSLDTDSFLKTALIDMY 215
Query: 152 ATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSF 211
S+D R+ E N V W +I G+ G L ++ +L SF
Sbjct: 216 FKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSF 275
Query: 212 SIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQ 271
+ A+ AC+ + G+Q+H V+ G ++ V S+L MY +C EA+ F +
Sbjct: 276 TGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVD 335
Query: 272 KDTITWNTLIAGFETLDSKES-LCIFSLM 299
K WN ++A + D S L +F M
Sbjct: 336 KRLEIWNAMVAAYAENDYGYSALDLFGFM 364
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 115/261 (44%), Gaps = 4/261 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHR-DVVAWTAMITGYTSCNHHSRAWKVFPRMLRD 99
L T LI YF G +A +F E+ + +VV W MI G+ + ++ +
Sbjct: 207 LKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNN 266
Query: 100 GVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD 159
V+ + + + L AC G H VK+G YV +L+ MY+ C +
Sbjct: 267 SVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDP-YVCTSLLSMYSKC-GMVG 324
Query: 160 RARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACA 219
A VF +V K W ++ Y + L +F M + F+ S +S C+
Sbjct: 325 EAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCS 384
Query: 220 SVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNT 279
+G GK +HA + QS + +++L +Y +C C +A F M +KD + W +
Sbjct: 385 VLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGS 444
Query: 280 LIAGF-ETLDSKESLCIFSLM 299
LI+G + KE+L +F M
Sbjct: 445 LISGLCKNGKFKEALKVFGDM 465
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 118/246 (47%), Gaps = 4/246 (1%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
+ LI Y G + A +F M+ ++VAW +MI+ Y+ N + +F ML G+
Sbjct: 515 SSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIF 574
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
P++ ++++VL A +L G+ HG +++G S ++ NAL+DMY C S A
Sbjct: 575 PDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIP-SDTHLKNALIDMYVKCGFS-KYAE 632
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVG 222
+F+ + K+ ++W +I GY GD L +F +M +F +SAC G
Sbjct: 633 NIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSG 692
Query: 223 SGILGKQLHAAVI-NHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM-TQKDTITWNTL 280
GK + + ++G + N+ +++D+ R EA F M + D+ W L
Sbjct: 693 FVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCL 752
Query: 281 IAGFET 286
++ T
Sbjct: 753 LSASRT 758
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 96/199 (48%), Gaps = 15/199 (7%)
Query: 99 DGVRP---NAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCC 155
DG P + FT ++LKAC L L G+ HG V +G R ++ +L++MY C
Sbjct: 51 DGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDP-FIATSLVNMYVK-C 108
Query: 156 DSMDRARMVFE-------DIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP 208
+D A VF+ + ++ W ++I GY G+ FR+M++
Sbjct: 109 GFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDA 168
Query: 209 FSFSIAVSACASVGS--GILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFF 266
FS SI VS G+ GKQ+H ++ + ++ + +++DMY + + +A + F
Sbjct: 169 FSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVF 228
Query: 267 CEMTQK-DTITWNTLIAGF 284
E+ K + + WN +I GF
Sbjct: 229 VEIEDKSNVVLWNVMIVGF 247
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 119/219 (54%), Gaps = 5/219 (2%)
Query: 69 DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGV---RPNAFTLSAVLKACKGLRALFCGE 125
++ +W I G++ + ++ ++ +MLR G RP+ FT + K C LR G
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 126 LAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTH 185
+ G +K+ S +V NA + M+A+C D M+ AR VF++ ++ VSW LI GY
Sbjct: 177 MILGHVLKLRLELVS-HVHNASIHMFASCGD-MENARKVFDESPVRDLVSWNCLINGYKK 234
Query: 186 RGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPV 245
G+A + V++ M E + + VS+C+ +G GK+ + V +G + +P+
Sbjct: 235 IGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPL 294
Query: 246 MNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
+N+++DM+ +C EA++ F + ++ ++W T+I+G+
Sbjct: 295 VNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGY 333
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 133/280 (47%), Gaps = 34/280 (12%)
Query: 53 GSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVL 112
G ++ A +FDE RD+V+W +I GY +A V+ M +GV+P+ T+ ++
Sbjct: 205 GDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLV 264
Query: 113 KACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKN 172
+C L L G+ + + G R +I + NALMDM++ C D + AR +F+++ +
Sbjct: 265 SSCSMLGDLNRGKEFYEYVKENGLR-MTIPLVNALMDMFSKCGD-IHEARRIFDNLEKRT 322
Query: 173 AVSWTTLITGYTHRG---------------------DAFGG----------LRVFRQMVL 201
VSWTT+I+GY G GG L +F++M
Sbjct: 323 IVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQT 382
Query: 202 EEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASE 261
+ + +SAC+ +G+ +G +H + + N+ + S++DMY +C SE
Sbjct: 383 SNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISE 442
Query: 262 AKQFFCEMTQKDTITWNTLIAGFETL-DSKESLCIFSLMV 300
A F + ++++T+ +I G D+ ++ F+ M+
Sbjct: 443 ALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMI 482
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 69/148 (46%), Gaps = 4/148 (2%)
Query: 158 MDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLE---EGELSPFSFSIA 214
+D + + + I N SW I G++ + +++QM+ E F++ +
Sbjct: 103 LDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVL 162
Query: 215 VSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDT 274
CA + LG + V+ + V N+ + M+ C A++ F E +D
Sbjct: 163 FKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDL 222
Query: 275 ITWNTLIAGFETL-DSKESLCIFSLMVS 301
++WN LI G++ + ++++++ ++ LM S
Sbjct: 223 VSWNCLINGYKKIGEAEKAIYVYKLMES 250
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 135/277 (48%), Gaps = 5/277 (1%)
Query: 11 RIDFRPAPSVVLHHRTQLNDSPFRPKDL---TGLTTDLIKSYFDKGSIQEAHTLFDEMTH 67
RI F + S + H TQ++ +L + ++ DLI S G I A +FDE+
Sbjct: 19 RIKFLQSISKLKRHITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQ 78
Query: 68 RDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELA 127
R V + +MI Y+ + +++ +M+ + ++P++ T + +KAC L GE
Sbjct: 79 RGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAV 138
Query: 128 HGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRG 187
AV G + + ++V ++++++Y C MD A ++F + ++ + WTT++TG+ G
Sbjct: 139 WCKAVDFGYK-NDVFVCSSVLNLYMK-CGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAG 196
Query: 188 DAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMN 247
+ + +R+M E + A +G +G+ +H + G N+ V
Sbjct: 197 KSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVET 256
Query: 248 SILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
S++DMY + A + F M K ++W +LI+GF
Sbjct: 257 SLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGF 293
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 120/252 (47%), Gaps = 3/252 (1%)
Query: 33 FRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKV 92
F K+ + + ++ Y G + EA LF +M RDV+ WT M+TG+ +A +
Sbjct: 145 FGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEF 204
Query: 93 FPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYA 152
+ M +G + + +L+A L G HG + G ++ V+ +L+DMYA
Sbjct: 205 YREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLP-MNVVVETSLVDMYA 263
Query: 153 TCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFS 212
++ A VF ++ K AVSW +LI+G+ G A +M + +
Sbjct: 264 K-VGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLV 322
Query: 213 IAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK 272
+ AC+ VGS G+ +H ++ + +++DMY +C S +++ F + +K
Sbjct: 323 GVLVACSQVGSLKTGRLVHCYILKRHVLDRVTA-TALMDMYSKCGALSSSREIFEHVGRK 381
Query: 273 DTITWNTLIAGF 284
D + WNT+I+ +
Sbjct: 382 DLVCWNTMISCY 393
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 113/247 (45%), Gaps = 9/247 (3%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ T L+ Y G I+ A +F M + V+W ++I+G+ ++A++ M G
Sbjct: 254 VETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLG 313
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVK--IGARGSSIYVDNALMDMYATCCDSM 158
+P+ TL VL AC + +L G L H +K + R ++ ALMDMY+ C ++
Sbjct: 314 FQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVTA----TALMDMYSKC-GAL 368
Query: 159 DRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSAC 218
+R +FE + K+ V W T+I+ Y G+ + +F +M E +F+ +SA
Sbjct: 369 SSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSAL 428
Query: 219 ASVGSGILGKQLHAAVIN-HGFQSNLPVMNSILDMYCRCRCASEAKQFF-CEMTQKDTIT 276
+ G G+ + +IN + Q + ++D+ R EA E
Sbjct: 429 SHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPI 488
Query: 277 WNTLIAG 283
W L++G
Sbjct: 489 WVALLSG 495
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 122/234 (52%), Gaps = 5/234 (2%)
Query: 58 AHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKG 117
A LFD M R+++++ ++I+GYT + +A ++F ++ + FT + L C
Sbjct: 101 ARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGE 160
Query: 118 LRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWT 177
L GEL HGL V + +++ N L+DMY+ C +D+A +F+ ++ VSW
Sbjct: 161 RCDLDLGELLHGLVV-VNGLSQQVFLINVLIDMYSK-CGKLDQAMSLFDRCDERDQVSWN 218
Query: 178 TLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSF-SIAVSACASVGSGIL--GKQLHAAV 234
+LI+GY G A L + +M + L+ ++ S+ + C ++ G + G +H
Sbjct: 219 SLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYT 278
Query: 235 INHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLD 288
G + ++ V ++LDMY + EA + F M K+ +T+N +I+GF +D
Sbjct: 279 AKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMD 332
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 122/249 (48%), Gaps = 10/249 (4%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L LI Y G + +A +LFD RD V+W ++I+GY + +M RDG
Sbjct: 185 LINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDG 244
Query: 101 VRPNAFTLSAVLKA-CKGLRALFC--GELAHGLAVKIGARGSSIYVDNALMDMYATCCDS 157
+ + L +VLKA C L F G H K+G I V AL+DMYA S
Sbjct: 245 LNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGME-FDIVVRTALLDMYAK-NGS 302
Query: 158 MDRARMVFEDIVTKNAVSWTTLITGYTHRGD-----AFGGLRVFRQMVLEEGELSPFSFS 212
+ A +F + +KN V++ +I+G+ + + ++F M E SP +FS
Sbjct: 303 LKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFS 362
Query: 213 IAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK 272
+ + AC++ + G+Q+HA + + FQS+ + ++++++Y + Q F +++
Sbjct: 363 VVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQ 422
Query: 273 DTITWNTLI 281
D +W ++I
Sbjct: 423 DIASWTSMI 431
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 92/168 (54%), Gaps = 2/168 (1%)
Query: 124 GELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGY 183
G+LAHG +K + +Y+ N L++MY C + + AR +F+ + +N +S+ +LI+GY
Sbjct: 66 GKLAHGHMIK-SSLNPCLYLLNNLLNMYCKCRE-LGFARQLFDRMPERNIISFNSLISGY 123
Query: 184 THRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNL 243
T G + +F + +L F+++ A+ C LG+ LH V+ +G +
Sbjct: 124 TQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQV 183
Query: 244 PVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLDSKE 291
++N ++DMY +C +A F ++D ++WN+LI+G+ + + E
Sbjct: 184 FLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAE 231
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 109/252 (43%), Gaps = 6/252 (2%)
Query: 33 FRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKV 92
F+ + G + LI+ Y GS ++ F + +D+ +WT+MI + A+ +
Sbjct: 389 FQSDEFIG--SALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDL 446
Query: 93 FPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYA 152
F ++ +RP +T+S ++ AC AL GE G A+K G + V + + MYA
Sbjct: 447 FRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFT-SVKTSSISMYA 505
Query: 153 TCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFS 212
+M A VF ++ + +++ +I+ G A L +F M + + +F
Sbjct: 506 K-SGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFL 564
Query: 213 IAVSACASVGSGILGKQLHAAVIN-HGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQ 271
+ AC G G + + N + N ++D+ R S+A+
Sbjct: 565 GVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGF 624
Query: 272 KD-TITWNTLIA 282
+D +TW L++
Sbjct: 625 QDHPVTWRALLS 636
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 9/129 (6%)
Query: 160 RARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEG-ELSPFSFSIAVSAC 218
RA+ F +I + V+ T G G R + + L + I
Sbjct: 6 RAKTFFNNIAQDSLVTLITKRVGL--------GYRFLSSLCQPKNTALDSEGYKILFQTA 57
Query: 219 ASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWN 278
A GS +LGK H +I L ++N++L+MYC+CR A+Q F M +++ I++N
Sbjct: 58 AKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFN 117
Query: 279 TLIAGFETL 287
+LI+G+ +
Sbjct: 118 SLISGYTQM 126
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 132/253 (52%), Gaps = 11/253 (4%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRML--- 97
+++ LI Y G +++A +FDE+ R++V+WT+MI GY + A +F +L
Sbjct: 113 VSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDE 172
Query: 98 ---RDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIG-ARGSSIYVDNALMDMYAT 153
D + ++ L +V+ AC + A E H +K G RG S V N L+D YA
Sbjct: 173 NDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS--VGNTLLDAYAK 230
Query: 154 CCDS-MDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEG-ELSPFSF 211
+ + AR +F+ IV K+ VS+ ++++ Y G + VFR++V + + +
Sbjct: 231 GGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITL 290
Query: 212 SIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQ 271
S + A + G+ +GK +H VI G + ++ V SI+DMYC+C A++ F M
Sbjct: 291 STVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKN 350
Query: 272 KDTITWNTLIAGF 284
K+ +W +IAG+
Sbjct: 351 KNVRSWTAMIAGY 363
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 133/255 (52%), Gaps = 12/255 (4%)
Query: 56 QEAHTLFDEMTHR-DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKA 114
Q TLF+ + DV +W ++I + A F M + + P + +KA
Sbjct: 26 QNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKA 85
Query: 115 CKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAV 174
C L +F G+ H A G + S I+V +AL+ MY+T C ++ AR VF++I +N V
Sbjct: 86 CSSLFDIFSGKQTHQQAFVFGYQ-SDIFVSSALIVMYST-CGKLEDARKVFDEIPKRNIV 143
Query: 175 SWTTLITGYTHRGDAFGGLRVFRQMVLEEGE------LSPFSFSIAVSACASVGSGILGK 228
SWT++I GY G+A + +F+ ++++E + L +SAC+ V + L +
Sbjct: 144 SWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTE 203
Query: 229 QLHAAVINHGFQSNLPVMNSILDMYCRC--RCASEAKQFFCEMTQKDTITWNTLIAGF-E 285
+H+ VI GF + V N++LD Y + + A++ F ++ KD +++N++++ + +
Sbjct: 204 SIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ 263
Query: 286 TLDSKESLCIFSLMV 300
+ S E+ +F +V
Sbjct: 264 SGMSNEAFEVFRRLV 278
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 115/235 (48%), Gaps = 5/235 (2%)
Query: 52 KGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRP-NAFTLSA 110
+G + A +FD++ +D V++ ++++ Y + A++VF R++++ V NA TLS
Sbjct: 233 EGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLST 292
Query: 111 VLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVT 170
VL A AL G+ H +++G I V +++DMY C ++ AR F+ +
Sbjct: 293 VLLAVSHSGALRIGKCIHDQVIRMGLEDDVI-VGTSIIDMYCKC-GRVETARKAFDRMKN 350
Query: 171 KNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILG-KQ 229
KN SWT +I GY G A L +F M+ + +F ++AC+ G + G +
Sbjct: 351 KNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRW 410
Query: 230 LHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK-DTITWNTLIAG 283
+A G + L ++D+ R +A M K D+I W++L+A
Sbjct: 411 FNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAA 465
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
T +I Y G ++ A FD M +++V +WTAMI GY H ++A ++FP M+ GVR
Sbjct: 326 TSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVR 385
Query: 103 PNAFTLSAVLKAC 115
PN T +VL AC
Sbjct: 386 PNYITFVSVLAAC 398
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 122/249 (48%), Gaps = 2/249 (0%)
Query: 35 PKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFP 94
P T ++ Y G + +A LF +M ++V++WT MI G A +F
Sbjct: 155 PVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFK 214
Query: 95 RMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATC 154
MLR ++ + + V+ AC A G HGL +K+G YV +L+ YA C
Sbjct: 215 NMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEE-YVSASLITFYANC 273
Query: 155 CDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA 214
+ +R VF++ V + WT L++GY+ L +F M+ + +F+
Sbjct: 274 -KRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASG 332
Query: 215 VSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDT 274
+++C+++G+ GK++H + G +++ V NS++ MY ++A F ++ +K
Sbjct: 333 LNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSI 392
Query: 275 ITWNTLIAG 283
++WN++I G
Sbjct: 393 VSWNSIIVG 401
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 122/247 (49%), Gaps = 7/247 (2%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
++ LI Y + I ++ +FDE H V WTA+++GY+ H A +F MLR+
Sbjct: 262 VSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNS 321
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
+ PN T ++ L +C L L G+ HG+AVK+G + +V N+L+ MY+ + D
Sbjct: 322 ILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLE-TDAFVGNSLVVMYSDSGNVND- 379
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
A VF I K+ VSW ++I G G +F QM+ E +F+ +SAC+
Sbjct: 380 AVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSH 439
Query: 221 VGSGILGKQLH---AAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK-DTIT 276
G G++L ++ INH + ++D+ RC EA++ M K + +
Sbjct: 440 CGFLEKGRKLFYYMSSGINH-IDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMV 498
Query: 277 WNTLIAG 283
W L++
Sbjct: 499 WLALLSA 505
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 127/268 (47%), Gaps = 13/268 (4%)
Query: 35 PKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFP 94
P L T +I Y + +A LFDEM RDVV+W +MI+G C + A K+F
Sbjct: 62 PSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFD 121
Query: 95 RMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATC 154
M V ++ ++ K +A L + + VK A N+++ Y
Sbjct: 122 EMPERSVVSWTAMVNGCFRSGKVDQA---ERLFYQMPVKDTAAW------NSMVHGYLQ- 171
Query: 155 CDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA 214
+D A +F+ + KN +SWTT+I G + L +F+ M+ + + F+
Sbjct: 172 FGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCV 231
Query: 215 VSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDT 274
++ACA+ + +G Q+H +I GF V S++ Y C+ ++++ F E +
Sbjct: 232 ITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQV 291
Query: 275 ITWNTLIAGFETLDSK--ESLCIFSLMV 300
W L++G+ +L+ K ++L IFS M+
Sbjct: 292 AVWTALLSGY-SLNKKHEDALSIFSGML 318
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 132/256 (51%), Gaps = 3/256 (1%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
+ SY GS+ A +F + + V +W A+I G+ N + +M G+ P+
Sbjct: 436 FVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPD 495
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
+FT+ ++L AC L++L G+ HG ++ ++V +++ +Y C + + + +
Sbjct: 496 SFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLE-RDLFVYLSVLSLYIHCGE-LCTVQAL 553
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
F+ + K+ VSW T+ITGY G L VFRQMVL +L S AC+ + S
Sbjct: 554 FDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSL 613
Query: 225 ILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
LG++ HA + H + + + S++DMY + +++ + F + +K T +WN +I G+
Sbjct: 614 RLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGY 673
Query: 285 ETLD-SKESLCIFSLM 299
+KE++ +F M
Sbjct: 674 GIHGLAKEAIKLFEEM 689
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 122/257 (47%), Gaps = 14/257 (5%)
Query: 39 TGLTTD------LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKV 92
TGL D L+ Y G + +A LFD M R++V+W +MI ++ ++ +
Sbjct: 216 TGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLL 275
Query: 93 FPRMLR---DGV-RPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALM 148
M+ DG P+ TL VL C R + G+ HG AVK+ + ++NALM
Sbjct: 276 LGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL-RLDKELVLNNALM 334
Query: 149 DMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVL--EEGEL 206
DMY+ C + A+M+F+ KN VSW T++ G++ GD G V RQM+ E+ +
Sbjct: 335 DMYSKC-GCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKA 393
Query: 207 SPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFF 266
+ AV C K+LH + F N V N+ + Y +C S A++ F
Sbjct: 394 DEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVF 453
Query: 267 CEMTQKDTITWNTLIAG 283
+ K +WN LI G
Sbjct: 454 HGIRSKTVNSWNALIGG 470
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 126/264 (47%), Gaps = 9/264 (3%)
Query: 27 QLNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHH 86
QL R ++ L T +I Y GS ++ +FD + +++ W A+I+ Y+ +
Sbjct: 108 QLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELY 167
Query: 87 SRAWKVFPRMLRD-GVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDN 145
+ F M+ + P+ FT V+KAC G+ + G HGL VK G ++V N
Sbjct: 168 DEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLV-EDVFVGN 226
Query: 146 ALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGE 205
AL+ Y T D A +F+ + +N VSW ++I ++ G + + +M+ E G+
Sbjct: 227 ALVSFYGTHGFVTD-ALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGD 285
Query: 206 LSPFSFSIA-----VSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCAS 260
F +A + CA LGK +H + L + N+++DMY +C C +
Sbjct: 286 -GAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCIT 344
Query: 261 EAKQFFCEMTQKDTITWNTLIAGF 284
A+ F K+ ++WNT++ GF
Sbjct: 345 NAQMIFKMNNNKNVVSWNTMVGGF 368
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 108/237 (45%), Gaps = 5/237 (2%)
Query: 49 YFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTL 108
Y G + LFD M + +V+W +ITGY RA VF +M+ G++ ++
Sbjct: 541 YIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISM 600
Query: 109 SAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDI 168
V AC L +L G AH A+K + ++ +L+DMYA S+ ++ VF +
Sbjct: 601 MPVFGACSLLPSLRLGREAHAYALKHLLEDDA-FIACSLIDMYAK-NGSITQSSKVFNGL 658
Query: 169 VTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILG- 227
K+ SW +I GY G A +++F +M +F ++AC G G
Sbjct: 659 KEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGL 718
Query: 228 KQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFC-EMTQK-DTITWNTLIA 282
+ L + G + NL ++DM R +A + EM+++ D W +L++
Sbjct: 719 RYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLS 775
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 125/271 (46%), Gaps = 4/271 (1%)
Query: 16 PAPSVVLHHRTQLNDSPFRPKDLTGLTTD-LIKSYFDKGSIQEAHTLFDEMTHRDVVAWT 74
P P ++ + Q++ R +L + L+ Y G + + L RD+V W
Sbjct: 213 PMPEGLMMGK-QVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWN 271
Query: 75 AMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKI 134
+++ A + M+ +GV P+ FT+S+VL AC L L G+ H A+K
Sbjct: 272 TVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKN 331
Query: 135 GARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLR 194
G+ + +V +AL+DMY C + R VF+ + + W +I GY+ L
Sbjct: 332 GSLDENSFVGSALVDMYCNCKQVLS-GRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALL 390
Query: 195 VFRQMVLEEGELS-PFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMY 253
+F M G L+ + + V AC G+ + +H V+ G + V N+++DMY
Sbjct: 391 LFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMY 450
Query: 254 CRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
R A + F +M +D +TWNT+I G+
Sbjct: 451 SRLGKIDIAMRIFGKMEDRDLVTWNTMITGY 481
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 18/254 (7%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRD-GVRP 103
L+ Y + + +FD M R + W AMI GY+ H A +F M G+
Sbjct: 344 LVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLA 403
Query: 104 NAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARM 163
N+ T++ V+ AC A E HG VK G +V N LMDMY+ +D A
Sbjct: 404 NSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDR-FVQNTLMDMYSRL-GKIDIAMR 461
Query: 164 VFEDIVTKNAVSWTTLITGYT---HRGDAFGGLRVFRQMVLEEG--------ELSPFSFS 212
+F + ++ V+W T+ITGY H DA L + + LE L P S +
Sbjct: 462 IFGKMEDRDLVTWNTMITGYVFSEHHEDAL--LLLHKMQNLERKVSKGASRVSLKPNSIT 519
Query: 213 IA--VSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT 270
+ + +CA++ + GK++HA I + +++ V ++++DMY +C C +++ F ++
Sbjct: 520 LMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP 579
Query: 271 QKDTITWNTLIAGF 284
QK+ ITWN +I +
Sbjct: 580 QKNVITWNVIIMAY 593
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 126/265 (47%), Gaps = 8/265 (3%)
Query: 37 DLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRM 96
D + L+ Y G + +FD ++ R+ V+W ++I+ S A + F M
Sbjct: 131 DSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCM 190
Query: 97 LRDGVRPNAFTLSAVLKACKGL---RALFCGELAHGLAVKIGARGSSIYVDNALMDMYAT 153
L + V P++FTL +V+ AC L L G+ H ++ G S ++ N L+ MY
Sbjct: 191 LDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS--FIINTLVAMYGK 248
Query: 154 CCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSI 213
+ ++++ ++ V+W T+++ L R+MVLE E F+ S
Sbjct: 249 -LGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISS 307
Query: 214 AVSACASVGSGILGKQLHAAVINHG-FQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK 272
+ AC+ + GK+LHA + +G N V ++++DMYC C+ ++ F M +
Sbjct: 308 VLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDR 367
Query: 273 DTITWNTLIAGF-ETLDSKESLCIF 296
WN +IAG+ + KE+L +F
Sbjct: 368 KIGLWNAMIAGYSQNEHDKEALLLF 392
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 119/256 (46%), Gaps = 22/256 (8%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRML------- 97
L+ Y G I A +F +M RD+V W MITGY HH A + +M
Sbjct: 446 LMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVS 505
Query: 98 ----RDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYAT 153
R ++PN+ TL +L +C L AL G+ H A+K + + V +AL+DMYA
Sbjct: 506 KGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIK-NNLATDVAVGSALVDMYAK 564
Query: 154 C-CDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFS 212
C C M +R VF+ I KN ++W +I Y G+ + + R M+++ + + +F
Sbjct: 565 CGCLQM--SRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFI 622
Query: 213 IAVSACASVGSGILGKQLHAAVI---NHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM 269
+AC+ SG++ + L + ++G + + ++D+ R EA Q M
Sbjct: 623 SVFAACSH--SGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMM 680
Query: 270 TQ--KDTITWNTLIAG 283
+ W++L+
Sbjct: 681 PRDFNKAGAWSSLLGA 696
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 5/215 (2%)
Query: 73 WTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAV 132
W ++ N A + M+ G++P+ + A+LKA L+ + G+ H
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 133 KIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGG 192
K G S+ V N L+++Y C D VF+ I +N VSW +LI+
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGD-FGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 193 LRVFRQMVLEEGELSPFSFSIAVSACASVGSG---ILGKQLHAAVINHGFQSNLPVMNSI 249
L FR M+ E E S F+ V+AC+++ ++GKQ+HA + G + N ++N++
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTL 242
Query: 250 LDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
+ MY + + +K +D +TWNT+++
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSL 277
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 125/260 (48%), Gaps = 5/260 (1%)
Query: 44 DLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRML--RDGV 101
L+ Y G A LFDEM RD+V+W ++I+GY+ + + ++V RM+ G
Sbjct: 71 QLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGF 130
Query: 102 RPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRA 161
RPN T +++ AC + G HGL +K G + V NA ++ Y D
Sbjct: 131 RPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVL-EEVKVVNAFINWYGKTGDLTSSC 189
Query: 162 RMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASV 221
++ FED+ KN VSW T+I + G A GL F E +F + +C +
Sbjct: 190 KL-FEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDM 248
Query: 222 GSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLI 281
G L + +H ++ GF N + ++LD+Y + ++ F E+T D++ W ++
Sbjct: 249 GVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAML 308
Query: 282 AGFETLD-SKESLCIFSLMV 300
A + T ++++ F LMV
Sbjct: 309 AAYATHGFGRDAIKHFELMV 328
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+TT L+ Y G ++++ T+F E+T D +AWTAM+ Y + A K F M+ G
Sbjct: 272 ITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYG 331
Query: 101 VRPNAFTLSAVLKAC 115
+ P+ T + +L AC
Sbjct: 332 ISPDHVTFTHLLNAC 346
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 127/244 (52%), Gaps = 4/244 (1%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDE--MTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
T LI Y G + +A +F+E + + V + A+I+GYT+ + + A +F RM G
Sbjct: 92 TALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETG 151
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
V ++ T+ ++ C L+ G HG VK G S + V N+ + MY C S++
Sbjct: 152 VSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVK-GGLDSEVAVLNSFITMYMK-CGSVEA 209
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
R +F+++ K ++W +I+GY+ G A+ L ++ QM PF+ +S+CA
Sbjct: 210 GRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAH 269
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTL 280
+G+ +G ++ V ++GF N+ V N+ + MY RC ++A+ F M K ++W +
Sbjct: 270 LGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAM 329
Query: 281 IAGF 284
I +
Sbjct: 330 IGCY 333
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 116/248 (46%), Gaps = 8/248 (3%)
Query: 39 TGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLR 98
+ I Y GS++ LFDEM + ++ W A+I+GY+ +++ +M
Sbjct: 191 VAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKS 250
Query: 99 DGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARG--SSIYVDNALMDMYATCCD 156
GV P+ FTL +VL +C L A ++ H + + + G +++V NA + MYA C
Sbjct: 251 SGVCPDPFTLVSVLSSCAHLGA---KKIGHEVGKLVESNGFVPNVFVSNASISMYAR-CG 306
Query: 157 SMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVS 216
++ +AR VF+ + K+ VSWT +I Y G GL +F M+ F + +S
Sbjct: 307 NLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLS 366
Query: 217 ACASVGSGILGKQLHAAVI-NHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM-TQKDT 274
AC+ G G +L A+ + + + ++D+ R EA +F M + D
Sbjct: 367 ACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDG 426
Query: 275 ITWNTLIA 282
W L+
Sbjct: 427 AVWGALLG 434
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 93/200 (46%), Gaps = 4/200 (2%)
Query: 87 SRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNA 146
S + ++ MLR G P+AF+ +LK+C L G+ H K G + +V A
Sbjct: 35 SESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCE-TEPFVLTA 93
Query: 147 LMDMYATCCDSMDRARMVFED--IVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEG 204
L+ MY C D AR VFE+ ++ +V + LI+GYT +FR+M
Sbjct: 94 LISMYCKCGLVAD-ARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGV 152
Query: 205 ELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQ 264
+ + V C LG+ LH + G S + V+NS + MY +C ++
Sbjct: 153 SVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRR 212
Query: 265 FFCEMTQKDTITWNTLIAGF 284
F EM K ITWN +I+G+
Sbjct: 213 LFDEMPVKGLITWNAVISGY 232
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 137/286 (47%), Gaps = 41/286 (14%)
Query: 36 KDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPR 95
++ T L LI +Y G +EA +F ++ VV++TA+I+G++ N A KVF R
Sbjct: 111 EEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFR 170
Query: 96 MLRDG-VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMY--- 151
M + G V+PN +T A+L AC + G HGL VK G +S++V N+LM +Y
Sbjct: 171 MRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFL-NSVFVSNSLMSLYDKD 229
Query: 152 -ATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEG-ELSPF 209
+ CD + + +F++I ++ SW T+++ G + +F +M EG + F
Sbjct: 230 SGSSCDDVLK---LFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSF 286
Query: 210 SFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCR------------CR 257
+ S +S+C + G++LH I G L V N+++ Y +
Sbjct: 287 TLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMM 346
Query: 258 CASEAKQF-------------------FCEMTQKDTITWNTLIAGF 284
A +A F F +T+K+TIT+N L+AGF
Sbjct: 347 MAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGF 392
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 136/261 (52%), Gaps = 6/261 (2%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
T++I +Y G + A +F +T ++ + + A++ G+ H +A K+F ML+ GV
Sbjct: 355 TEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVE 414
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
F+L++ + AC + E HG +K G + + AL+DM T C+ M A
Sbjct: 415 LTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPC-IQTALLDM-CTRCERMADAE 472
Query: 163 MVFEDIVTK--NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGE-LSPFSFSIAVSACA 219
+F+ + ++ + T++I GY G + +F + + E+ L S ++ ++ C
Sbjct: 473 EMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCG 532
Query: 220 SVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNT 279
++G +G Q+H + G+ S++ + NS++ MY +C + +A + F M + D I+WN+
Sbjct: 533 TLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNS 592
Query: 280 LIAGF-ETLDSKESLCIFSLM 299
LI+ + + E+L ++S M
Sbjct: 593 LISCYILQRNGDEALALWSRM 613
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 131/262 (50%), Gaps = 9/262 (3%)
Query: 42 TTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG- 100
+T L+ Y G I EA +F+ + RD+V W A+++ Y A+ + M D
Sbjct: 180 STSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKN 239
Query: 101 -VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD 159
R + FT S++L AC+ + G+ H + K+ + I V AL++MYA + +
Sbjct: 240 RFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQ-FDIPVATALLNMYAKS-NHLS 293
Query: 160 RARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACA 219
AR FE +V +N VSW +I G+ G+ +R+F QM+LE + +F+ +S+CA
Sbjct: 294 DARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCA 353
Query: 220 SVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNT 279
+ KQ+ A V G L V NS++ Y R SEA F + + D ++W +
Sbjct: 354 KFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTS 413
Query: 280 LIAGFETLD-SKESLCIFSLMV 300
+I + ++ESL +F M+
Sbjct: 414 VIGALASHGFAEESLQMFESML 435
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 132/271 (48%), Gaps = 20/271 (7%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTS----CNHHSR-AWKVFPR 95
L L+++Y +A LFDEM R++V W +I G NH + + R
Sbjct: 73 LQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSR 132
Query: 96 MLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCC 155
+L V + + +++ C + G H L VK G SS + +L+ Y C
Sbjct: 133 ILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLE-SSCFPSTSLVHFYGK-C 190
Query: 156 DSMDRARMVFEDIVTKNAVSWTTLITGYTHRG---DAFGGLRVFRQMVLEEGEL--SPFS 210
+ AR VFE ++ ++ V W L++ Y G +AFG L++ M ++ F+
Sbjct: 191 GLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKL---MGSDKNRFRGDYFT 247
Query: 211 FSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT 270
FS +SAC GKQ+HA + +Q ++PV ++L+MY + S+A++ F M
Sbjct: 248 FSSLLSACRIEQ----GKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMV 303
Query: 271 QKDTITWNTLIAGF-ETLDSKESLCIFSLMV 300
++ ++WN +I GF + + +E++ +F M+
Sbjct: 304 VRNVVSWNAMIVGFAQNGEGREAMRLFGQML 334
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 90/182 (49%), Gaps = 3/182 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ T L+ Y + +A F+ M R+VV+W AMI G+ A ++F +ML +
Sbjct: 278 VATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLEN 337
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
++P+ T ++VL +C A++ + + K G+ + V N+L+ Y+ ++
Sbjct: 338 LQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGS-ADFLSVANSLISSYSR-NGNLSE 395
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
A + F I + VSWT++I G A L++F M L++ + +F +SAC+
Sbjct: 396 ALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESM-LQKLQPDKITFLEVLSACSH 454
Query: 221 VG 222
G
Sbjct: 455 GG 456
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 7/162 (4%)
Query: 128 HGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHR- 186
HG VK G +S+++ N L+ Y T D A +F+++ +N V+W LI G R
Sbjct: 59 HGFMVKQGIY-NSLFLQNKLLQAY-TKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRD 116
Query: 187 GD----AFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSN 242
GD A G +++ + L SF + C + G QLH ++ G +S+
Sbjct: 117 GDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESS 176
Query: 243 LPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
S++ Y +C EA++ F + +D + WN L++ +
Sbjct: 177 CFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSY 218
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 123/232 (53%), Gaps = 2/232 (0%)
Query: 53 GSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVL 112
G I +A LFDE+ R++ ++ ++I+G+ + ++ A+++F M + T + +L
Sbjct: 172 GMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVML 231
Query: 113 KACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKN 172
+A GL +++ G+ H A+K+G ++ +V L+DMY+ C D D AR FE + K
Sbjct: 232 RASAGLGSIYVGKQLHVCALKLGVVDNT-FVSCGLIDMYSKCGDIED-ARCAFECMPEKT 289
Query: 173 AVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHA 232
V+W +I GY G + L + M + F+ SI + + L KQ HA
Sbjct: 290 TVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHA 349
Query: 233 AVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
++I +GF+S + +++D Y + A+ F ++ +K+ I+WN L+ G+
Sbjct: 350 SLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGY 401
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 121/243 (49%), Gaps = 4/243 (1%)
Query: 59 HTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRM-LRDGVRPNAFTLSAVLKACKG 117
L D + V + I CN A+++F + +R + T A+++AC
Sbjct: 76 QILDDTQISKSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIR 135
Query: 118 LRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWT 177
L+++ C + +G + G Y+ N ++ M+ C +D AR +F++I +N S+
Sbjct: 136 LKSIRCVKRVYGFMMSNGFEPEQ-YMMNRILLMHVKCGMIID-ARRLFDEIPERNLYSYY 193
Query: 178 TLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINH 237
++I+G+ + G+ +F+ M E + +F++ + A A +GS +GKQLH +
Sbjct: 194 SIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKL 253
Query: 238 GFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLD-SKESLCIF 296
G N V ++DMY +C +A+ F M +K T+ WN +IAG+ S+E+LC+
Sbjct: 254 GVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLL 313
Query: 297 SLM 299
M
Sbjct: 314 YDM 316
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 111/247 (44%), Gaps = 4/247 (1%)
Query: 37 DLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRM 96
D T ++ LI Y G I++A F+ M + VAW +I GY + A + M
Sbjct: 257 DNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDM 316
Query: 97 LRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCD 156
GV + FTLS +++ L L + AH ++ G S I + AL+D Y+
Sbjct: 317 RDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFE-SEIVANTALVDFYSKW-G 374
Query: 157 SMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVS 216
+D AR VF+ + KN +SW L+ GY + G +++F +M+ + +F +S
Sbjct: 375 RVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLS 434
Query: 217 ACASVGSGILGKQLHAAVIN-HGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTI 275
ACA G G ++ ++ HG + ++++ R EA F K T+
Sbjct: 435 ACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTV 494
Query: 276 T-WNTLI 281
W L+
Sbjct: 495 NMWAALL 501
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 115/240 (47%), Gaps = 2/240 (0%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
LI Y G + A +FDEM R + W AMI G + +F M G P+
Sbjct: 31 LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPD 90
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
+TL +V GLR++ G+ HG +K G + V+++L MY D +V
Sbjct: 91 EYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLE-LDLVVNSSLAHMYMRNGKLQD-GEIV 148
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
+ +N V+W TLI G G L +++ M + + +F +S+C+ +
Sbjct: 149 IRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIR 208
Query: 225 ILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
G+Q+HA I G S + V++S++ MY +C C +A + F E +D + W+++I+ +
Sbjct: 209 GQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAY 268
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 66/167 (39%), Gaps = 32/167 (19%)
Query: 148 MDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQM-------- 199
M MY+ D A V+ + KN +S LI GY GD +VF +M
Sbjct: 1 MSMYSKLGD-FPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTW 59
Query: 200 -----------VLEEG-----ELSPFSFSIAVSACASVGSG-------ILGKQLHAAVIN 236
EEG E+ FS SV SG +G+Q+H I
Sbjct: 60 NAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIK 119
Query: 237 HGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAG 283
+G + +L V +S+ MY R + + M ++ + WNTLI G
Sbjct: 120 YGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMG 166
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 138/289 (47%), Gaps = 38/289 (13%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
L+K Y G + A +FD DV +W MI+GY + + ++ M R+ V P
Sbjct: 176 LVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPT 235
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
+ TL VL AC ++ + H + S+ ++NAL++ YA C + MD A +
Sbjct: 236 SVTLLLVLSACSKVKDKDLCKRVHEYVSECKTE-PSLRLENALVNAYAACGE-MDIAVRI 293
Query: 165 FEDIVTKNAVSWTTLITGYTHRG------------------------DAF-------GGL 193
F + ++ +SWT+++ GY RG D + L
Sbjct: 294 FRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESL 353
Query: 194 RVFRQMVLEEGELSPFSFSI--AVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILD 251
+FR+M + + P F++ ++ACA +GS +G+ + + + ++++ V N+++D
Sbjct: 354 EIFREM--QSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALID 411
Query: 252 MYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF-ETLDSKESLCIFSLM 299
MY +C C+ +A++ F +M Q+D TW ++ G +E++ +F M
Sbjct: 412 MYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQM 460
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 122/235 (51%), Gaps = 7/235 (2%)
Query: 53 GSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVL 112
G + A+ LF ++ DVV W MI G++ + +++ ML++GV P++ T +L
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 113 KACK-GLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTK 171
K AL CG+ H VK G GS++YV NAL+ MY + C MD AR VF+ +
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGL-GSNLYVQNALVKMY-SLCGLMDMARGVFDRRCKE 199
Query: 172 NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFS--IAVSACASVGSGILGKQ 229
+ SW +I+GY + + + +M E +SP S + + +SAC+ V L K+
Sbjct: 200 DVFSWNLMISGYNRMKEYEESIELLVEM--ERNLVSPTSVTLLLVLSACSKVKDKDLCKR 257
Query: 230 LHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
+H V + +L + N++++ Y C A + F M +D I+W +++ G+
Sbjct: 258 VHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGY 312
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 121/243 (49%), Gaps = 4/243 (1%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
T ++K Y ++G+++ A T FD+M RD ++WT MI GY + + ++F M G+
Sbjct: 306 TSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMI 365
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
P+ FT+ +VL AC L +L GE K + + + V NAL+DMY C S ++A+
Sbjct: 366 PDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIK-NDVVVGNALIDMYFKCGCS-EKAQ 423
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVG 222
VF D+ ++ +WT ++ G + G ++VF QM + ++ +SAC G
Sbjct: 424 KVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSG 483
Query: 223 SGILGKQLHAAV-INHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK-DTITWNTL 280
++ A + +H + +L ++DM R EA + +M ++I W L
Sbjct: 484 MVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGAL 543
Query: 281 IAG 283
+
Sbjct: 544 LGA 546
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 1/133 (0%)
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
A +F I + V W +I G++ G+R++ M+ E +F ++
Sbjct: 87 AYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKR 146
Query: 221 VGSGIL-GKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNT 279
G + GK+LH V+ G SNL V N+++ MY C A+ F ++D +WN
Sbjct: 147 DGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNL 206
Query: 280 LIAGFETLDSKES 292
+I+G+ + E
Sbjct: 207 MISGYNRMKEYEE 219
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 121/248 (48%), Gaps = 4/248 (1%)
Query: 35 PKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFP 94
P+ +G + LIK Y D G + A LF+ M ++VV+WT +I G++ + A +
Sbjct: 223 PERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYF 282
Query: 95 RMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATC 154
ML G++PN +T++AVL AC AL G HG + G + + AL+DMYA C
Sbjct: 283 EMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRA-IGTALVDMYAKC 341
Query: 155 CDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA 214
+ +D A VF ++ K+ +SWT +I G+ G ++ FRQM+ + F
Sbjct: 342 GE-LDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAV 400
Query: 215 VSACASVGSGILGKQLHAAV-INHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM-TQK 272
++AC + LG ++ +++ + L ++D+ R +EA + M
Sbjct: 401 LTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINP 460
Query: 273 DTITWNTL 280
D TW L
Sbjct: 461 DLTTWAAL 468
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 122/291 (41%), Gaps = 68/291 (23%)
Query: 60 TLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGL- 118
++F R+ A+I G T + + F MLR GV+P+ T VLK+ L
Sbjct: 81 SIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLG 140
Query: 119 -----RALFC------------------------GELAHGLAVKIGA----RGSSIYVDN 145
RAL G+L H V + + SI + N
Sbjct: 141 FRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWN 200
Query: 146 ALMDMYATCCD------------------------------SMDRARMVFEDIVTKNAVS 175
L++ Y D ++RA+ +FE + KN VS
Sbjct: 201 VLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVS 260
Query: 176 WTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA--VSACASVGSGILGKQLHAA 233
WTTLI G++ GD + + +M LE+G L P ++IA +SAC+ G+ G ++H
Sbjct: 261 WTTLINGFSQTGDYETAISTYFEM-LEKG-LKPNEYTIAAVLSACSKSGALGSGIRIHGY 318
Query: 234 VINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
++++G + + + +++DMY +C A F M KD ++W +I G+
Sbjct: 319 ILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGW 369
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 123/261 (47%), Gaps = 37/261 (14%)
Query: 58 AHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRML--RDGVRPNAFTLSAVLKAC 115
A+ +F + H++ W +I G++ + A +F ML V+P T +V KA
Sbjct: 77 AYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAY 136
Query: 116 KGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATC--------------------- 154
L G HG+ +K G S ++ N ++ MY TC
Sbjct: 137 GRLGQARDGRQLHGMVIKEGLEDDS-FIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAW 195
Query: 155 ---------CDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGE 205
C +D+A+ +F+++ +N VSW ++I+G+ G L +FR+M +E +
Sbjct: 196 NSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREM--QEKD 253
Query: 206 LSPFSFSIA--VSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAK 263
+ P F++ ++ACA +G+ G+ +H ++ + F+ N V+ +++DMYC+C C E
Sbjct: 254 VKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGL 313
Query: 264 QFFCEMTQKDTITWNTLIAGF 284
F +K WN++I G
Sbjct: 314 NVFECAPKKQLSCWNSMILGL 334
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 85/180 (47%), Gaps = 6/180 (3%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
+I + G I +A LFDEM R+ V+W +MI+G+ A +F M V+P+
Sbjct: 198 MIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPD 257
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
FT+ ++L AC L A G H V+ +SI V AL+DMY C ++ V
Sbjct: 258 GFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVV-TALIDMYCK-CGCIEEGLNV 315
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAVSACASVG 222
FE K W ++I G + G + +F + LE L P SF ++ACA G
Sbjct: 316 FECAPKKQLSCWNSMILGLANNGFEERAMDLFSE--LERSGLEPDSVSFIGVLTACAHSG 373
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 82/196 (41%), Gaps = 12/196 (6%)
Query: 94 PRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYAT 153
P M G L + C +R L + H +K G ++ L A
Sbjct: 14 PAMPSSGSLSGNTYLRLIDTQCSTMREL---KQIHASLIKTGLISDTVTASRVL----AF 66
Query: 154 CCDS---MDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP-- 208
CC S M+ A +VF I KN W T+I G++ + +F M+ + P
Sbjct: 67 CCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQR 126
Query: 209 FSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCE 268
++ A +G G+QLH VI G + + + N++L MY C C EA + F
Sbjct: 127 LTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLG 186
Query: 269 MTQKDTITWNTLIAGF 284
M D + WN++I GF
Sbjct: 187 MIGFDVVAWNSMIMGF 202
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 139/290 (47%), Gaps = 20/290 (6%)
Query: 22 LHHRTQLNDSPFRPKDL--TGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITG 79
LH T P P L G L S+ D + A +FD + + W +I
Sbjct: 67 LHAFTLRTTYPEEPATLFLYGKILQLSSSFSD---VNYAFRVFDSIENHSSFMWNTLIR- 122
Query: 80 YTSCNH----HSRAWKVFPRMLRDG-VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKI 134
+C H A+ ++ +ML G P+ T VLKAC + G+ H VK
Sbjct: 123 --ACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKH 180
Query: 135 GARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLR 194
G G +YV+N L+ +Y +C +D AR VF+++ ++ VSW ++I G+ L+
Sbjct: 181 GF-GGDVYVNNGLIHLYGSC-GCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQ 238
Query: 195 VFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINH---GFQSNLPVMNSILD 251
+FR+M E ++ +SACA +GS LG HA ++ ++ V NS+++
Sbjct: 239 LFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIE 297
Query: 252 MYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLD-SKESLCIFSLMV 300
MYC+C A+Q F M ++D +WN +I GF T ++E++ F MV
Sbjct: 298 MYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMV 347
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 113/247 (45%), Gaps = 8/247 (3%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ LI Y G + A +FDEM R +V+W +MI + A ++F M R
Sbjct: 188 VNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-S 246
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSS--IYVDNALMDMYATCCDSM 158
P+ +T+ +VL AC GL +L G AH ++ + + V N+L++MY C S+
Sbjct: 247 FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKC-GSL 305
Query: 159 DRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA--VS 216
A VF+ + ++ SW +I G+ G A + F +MV + + P S + +
Sbjct: 306 RMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLI 365
Query: 217 ACASVGSGILGKQLHAAVI-NHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK-DT 274
AC G G+Q ++ ++ + L I+D+ R +EA M K D
Sbjct: 366 ACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDA 425
Query: 275 ITWNTLI 281
+ W +L+
Sbjct: 426 VIWRSLL 432
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 126/277 (45%), Gaps = 37/277 (13%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRD- 99
++ L+ Y G I+ H +FDEM RDVV+W +I+ Y A VF RM ++
Sbjct: 83 VSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQES 142
Query: 100 GVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCC---- 155
++ + T+ + L AC L+ L GE + V S+ + NAL+DM+ C
Sbjct: 143 NLKFDEGTIVSTLSACSALKNLEIGERIYRFVVT--EFEMSVRIGNALVDMFCKCGCLDK 200
Query: 156 -----DSM---------------------DRARMVFEDIVTKNAVSWTTLITGYTHRGDA 189
DSM D AR++FE K+ V WT ++ GY
Sbjct: 201 ARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRF 260
Query: 190 FGGLRVFRQMVLEEGELSPFSFSIA--VSACASVGSGILGKQLHAAVINHGFQSNLPVMN 247
L +FR M + + P +F + ++ CA G+ GK +H + + + V
Sbjct: 261 DEALELFRCM--QTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGT 318
Query: 248 SILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
+++DMY +C C A + F E+ ++DT +W +LI G
Sbjct: 319 ALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGL 355
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 114/216 (52%), Gaps = 4/216 (1%)
Query: 70 VVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHG 129
++ + M+ ++ +F + G+ P+ FTL VLK+ LR + GE HG
Sbjct: 11 LLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHG 70
Query: 130 LAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDA 189
AVK G S YV N+LM MYA+ ++ VF+++ ++ VSW LI+ Y G
Sbjct: 71 YAVKAGLEFDS-YVSNSLMGMYASL-GKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRF 128
Query: 190 FGGLRVFRQMVLEEG-ELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNS 248
+ VF++M E + + +SAC+++ + +G++++ V+ F+ ++ + N+
Sbjct: 129 EDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVRIGNA 187
Query: 249 ILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
++DM+C+C C +A+ F M K+ W +++ G+
Sbjct: 188 LVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGY 223
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 108/228 (47%), Gaps = 3/228 (1%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
T ++ Y G I EA LF+ +DVV WTAM+ GY N A ++F M G+R
Sbjct: 217 TSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIR 276
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
P+ F L ++L C AL G+ HG + + V AL+DMYA C ++ A
Sbjct: 277 PDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKV-VGTALVDMYAK-CGCIETAL 334
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVG 222
VF +I ++ SWT+LI G G + L ++ +M L +F ++AC G
Sbjct: 335 EVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGG 394
Query: 223 SGILGKQL-HAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM 269
G+++ H+ H Q + ++D+ CR EA++ +M
Sbjct: 395 FVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKM 442
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 122/246 (49%), Gaps = 2/246 (0%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L T LI +I H LF + D + ++I + + RML
Sbjct: 43 LLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSN 102
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
V P+ +T ++V+K+C L AL G+ H AV + G YV AL+ Y+ C D M+
Sbjct: 103 VSPSNYTFTSVIKSCADLSALRIGKGVHCHAV-VSGFGLDTYVQAALVTFYSKCGD-MEG 160
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
AR VF+ + K+ V+W +L++G+ G A ++VF QM E +F +SACA
Sbjct: 161 ARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQ 220
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTL 280
G+ LG +H +I+ G N+ + +++++Y RC +A++ F +M + + W +
Sbjct: 221 TGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAM 280
Query: 281 IAGFET 286
I+ + T
Sbjct: 281 ISAYGT 286
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 92/185 (49%), Gaps = 3/185 (1%)
Query: 39 TGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLR 98
T + L+ Y G ++ A +FD M + +VAW ++++G+ A +VF +M
Sbjct: 142 TYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRE 201
Query: 99 DGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSM 158
G P++ T ++L AC A+ G H + G ++ + AL+++Y+ C D +
Sbjct: 202 SGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGL-DLNVKLGTALINLYSRCGD-V 259
Query: 159 DRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGEL-SPFSFSIAVSA 217
+AR VF+ + N +WT +I+ Y G + +F +M + G + + +F +SA
Sbjct: 260 GKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSA 319
Query: 218 CASVG 222
CA G
Sbjct: 320 CAHAG 324
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 134/277 (48%), Gaps = 7/277 (2%)
Query: 27 QLNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHH 86
L SPF G T + + S+ A +F+ M RD W AM++G+ H
Sbjct: 77 HLIKSPFWSDVFVGTAT--VDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHT 134
Query: 87 SRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNA 146
+A+ +F M + + P++ T+ ++++ ++L E H + +++G + V N
Sbjct: 135 DKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGV-DVQVTVANT 193
Query: 147 LMDMYATCCDSMDRARMVFE--DIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEG 204
+ Y C D +D A++VFE D + VSW ++ Y+ G+AF ++ M+ EE
Sbjct: 194 WISTYGKCGD-LDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEF 252
Query: 205 ELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQ 264
+ +F ++C + + G+ +H+ I+ G ++ +N+ + MY + A+
Sbjct: 253 KPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARL 312
Query: 265 FFCEMTQKDTITWNTLIAGF-ETLDSKESLCIFSLMV 300
F MT + ++W +I+G+ E D E+L +F M+
Sbjct: 313 LFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMI 349
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 128/260 (49%), Gaps = 8/260 (3%)
Query: 46 IKSYFDKGSIQEAHTLFDEMTH--RDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRP 103
I +Y G + A +F+ + R VV+W +M Y+ A+ ++ MLR+ +P
Sbjct: 195 ISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKP 254
Query: 104 NAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARM 163
+ T + +C+ L G L H A+ +G I N + MY+ D+ AR+
Sbjct: 255 DLSTFINLAASCQNPETLTQGRLIHSHAIHLGT-DQDIEAINTFISMYSKSEDTCS-ARL 312
Query: 164 VFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGS 223
+F+ + ++ VSWT +I+GY +GD L +F M+ + + +S C GS
Sbjct: 313 LFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGS 372
Query: 224 GILGKQLHAAVINHGFQ-SNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIA 282
GK + A +G + N+ + N+++DMY +C EA+ F +K +TW T+IA
Sbjct: 373 LETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIA 432
Query: 283 GFETLDS--KESLCIFSLMV 300
G+ L+ E+L +FS M+
Sbjct: 433 GY-ALNGIFLEALKLFSKMI 451
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 116/248 (46%), Gaps = 4/248 (1%)
Query: 36 KDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPR 95
+D+ + T I Y A LFD MT R V+WT MI+GY A +F
Sbjct: 289 QDIEAINT-FISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHA 347
Query: 96 MLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCC 155
M++ G +P+ TL +++ C +L G+ A G + ++ + NAL+DMY+ C
Sbjct: 348 MIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSK-C 406
Query: 156 DSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAV 215
S+ AR +F++ K V+WTT+I GY G L++F +M+ + + + +F +
Sbjct: 407 GSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVL 466
Query: 216 SACASVGSGILG-KQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK-D 273
ACA GS G + H + L + ++D+ R EA + M+ K D
Sbjct: 467 QACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPD 526
Query: 274 TITWNTLI 281
W L+
Sbjct: 527 AGIWGALL 534
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 112/236 (47%), Gaps = 9/236 (3%)
Query: 70 VVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHG 129
V AW I + N + +F M R G PN FT V KAC L + C E+ H
Sbjct: 17 VNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHA 76
Query: 130 LAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDA 189
+K S ++V A +DM+ C+S+D A VFE + ++A +W +++G+ G
Sbjct: 77 HLIK-SPFWSDVFVGTATVDMFVK-CNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHT 134
Query: 190 FGGLRVFRQMVLEEGELSPFSFSIA--VSACASVGSGILGKQLHAAVINHGFQSNLPVMN 247
+FR+M L E++P S ++ + + + S L + +HA I G + V N
Sbjct: 135 DKAFSLFREMRL--NEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVAN 192
Query: 248 SILDMYCRCRCASEAKQFFCEMTQKD--TITWNTLIAGFETL-DSKESLCIFSLMV 300
+ + Y +C AK F + + D ++WN++ + ++ ++ ++ LM+
Sbjct: 193 TWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLML 248
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 114 bits (284), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 123/245 (50%), Gaps = 4/245 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
++T ++ Y G + +A +FD+ +D+V WT MI+ Y ++ A +VF M G
Sbjct: 280 VSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSG 339
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
++P+ ++ +V+ AC L L + H + + S + ++NAL++MYA C +D
Sbjct: 340 IKPDVVSMFSVISACANLGILDKAKWVHS-CIHVNGLESELSINNALINMYAK-CGGLDA 397
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
R VFE + +N VSW+++I + G+A L +F +M E E + +F + C+
Sbjct: 398 TRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSH 457
Query: 221 VGSGILGKQLHAAVIN-HGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM-TQKDTITWN 278
G GK++ A++ + + L ++D++ R EA + M + + W
Sbjct: 458 SGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWG 517
Query: 279 TLIAG 283
+L++
Sbjct: 518 SLMSA 522
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 135/292 (46%), Gaps = 36/292 (12%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ T + Y G I A +FDEM+HRDVV W MI Y A+K+F M
Sbjct: 148 VETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSN 207
Query: 101 VRPNAFTLSAVLKAC------KGLRALF--------------------------CGELAH 128
V P+ L ++ AC + RA++ C ++A
Sbjct: 208 VMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAR 267
Query: 129 GLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGD 188
K+ R +++V A++ Y+ C +D A+++F+ K+ V WTT+I+ Y
Sbjct: 268 EFFRKMSVR--NLFVSTAMVSGYSKC-GRLDDAQVIFDQTEKKDLVCWTTMISAYVESDY 324
Query: 189 AFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNS 248
LRVF +M + S +SACA++G K +H+ + +G +S L + N+
Sbjct: 325 PQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNA 384
Query: 249 ILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETL-DSKESLCIFSLM 299
+++MY +C + F +M +++ ++W+++I ++ ++L +F+ M
Sbjct: 385 LINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARM 436
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 100/194 (51%), Gaps = 6/194 (3%)
Query: 93 FPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYA 152
+ R+ G R + F+ +LKA + ALF G HG+A KI A +V+ MDMYA
Sbjct: 99 YQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKI-ATLCDPFVETGFMDMYA 157
Query: 153 TCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFS 212
+C ++ AR VF+++ ++ V+W T+I Y G ++F +M ++ + P
Sbjct: 158 SC-GRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEM--KDSNVMPDEMI 214
Query: 213 IA--VSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT 270
+ VSAC G+ + ++ +I + + + ++ +++ MY C A++FF +M+
Sbjct: 215 LCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMS 274
Query: 271 QKDTITWNTLIAGF 284
++ +++G+
Sbjct: 275 VRNLFVSTAMVSGY 288
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 136/260 (52%), Gaps = 8/260 (3%)
Query: 48 SYFDKGSI-QEAHTLFDEMTH-RDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNA 105
+Y+ KG + +EA ++F M RD V+W +MI Y ++A ++ M+ G + +
Sbjct: 181 TYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDM 240
Query: 106 FTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATC--CDSMDRARM 163
FTL++VL A L L G HG +K G +S +V + L+D Y+ C CD M +
Sbjct: 241 FTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNS-HVGSGLIDFYSKCGGCDGMYDSEK 299
Query: 164 VFEDIVTKNAVSWTTLITGYTHRGD-AFGGLRVFRQMVLEEGELSPFSFSIAVSACASVG 222
VF++I++ + V W T+I+GY+ + + ++ FRQM SF SAC+++
Sbjct: 300 VFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLS 359
Query: 223 SGILGKQLHAAVINHGFQSN-LPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLI 281
S KQ+H I SN + V N+++ +Y + +A+ F M + + +++N +I
Sbjct: 360 SPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMI 419
Query: 282 AGF-ETLDSKESLCIFSLMV 300
G+ + E+L ++ M+
Sbjct: 420 KGYAQHGHGTEALLLYQRML 439
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 118/247 (47%), Gaps = 14/247 (5%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
++K+Y I A LFDE+ D V++ +I+GY A +F RM + G +
Sbjct: 80 IVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVD 139
Query: 105 AFTLSAVLKAC----KGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
FTLS ++ AC ++ L C ++ G S V+NA + Y+ +
Sbjct: 140 GFTLSGLIAACCDRVDLIKQLHCFSVSGGF-------DSYSSVNNAFVTYYSKGGLLREA 192
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
+ + ++ VSW ++I Y + L ++++M+ + ++ F+ + ++A S
Sbjct: 193 VSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTS 252
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCAS---EAKQFFCEMTQKDTITW 277
+ I G+Q H +I GF N V + ++D Y +C ++++ F E+ D + W
Sbjct: 253 LDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVW 312
Query: 278 NTLIAGF 284
NT+I+G+
Sbjct: 313 NTMISGY 319
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 108/232 (46%), Gaps = 4/232 (1%)
Query: 55 IQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSR-AWKVFPRMLRDGVRPNAFTLSAVLK 113
+ ++ +F E+ D+V W MI+GY+ S A K F +M R G RP+ + V
Sbjct: 294 MYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTS 353
Query: 114 ACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNA 173
AC L + + HGLA+K + I V+NAL+ +Y + D AR VF+ + NA
Sbjct: 354 ACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQD-ARWVFDRMPELNA 412
Query: 174 VSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQ-LHA 232
VS+ +I GY G L ++++M+ + +F +SACA G G++ +
Sbjct: 413 VSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNT 472
Query: 233 AVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK-DTITWNTLIAG 283
+ + ++D+ R EA++F M K ++ W L+
Sbjct: 473 MKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGA 524
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 35 PKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFP 94
P + + LI Y+ G++Q+A +FD M + V++ MI GY H + A ++
Sbjct: 377 PSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQ 436
Query: 95 RMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHG 129
RML G+ PN T AVL AC CG++ G
Sbjct: 437 RMLDSGIAPNKITFVAVLSACA-----HCGKVDEG 466
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 125/248 (50%), Gaps = 14/248 (5%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPR-MLRD 99
++ L+ Y G++ A FD + +RDV AW MI+GY + S + F ML
Sbjct: 88 ISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSS 147
Query: 100 GVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD 159
G+ P+ T +VLKAC R + G H LA+K G +YV +L+ +Y+ ++
Sbjct: 148 GLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWD-VYVAASLIHLYSRY-KAVG 202
Query: 160 RARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA--VSA 217
AR++F+++ ++ SW +I+GY G+A L L G + S ++ +SA
Sbjct: 203 NARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL------TLSNGLRAMDSVTVVSLLSA 256
Query: 218 CASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITW 277
C G G +H+ I HG +S L V N ++D+Y + ++ F M +D I+W
Sbjct: 257 CTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISW 316
Query: 278 NTLIAGFE 285
N++I +E
Sbjct: 317 NSIIKAYE 324
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 123/244 (50%), Gaps = 4/244 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
++ LI Y + G +++ +FD M RD+++W ++I Y RA +F M
Sbjct: 284 VSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSR 343
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
++P+ TL ++ L + G ++ G I + NA++ MYA +D
Sbjct: 344 IQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAK-LGLVDS 402
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPF--SFSIAVSAC 218
AR VF + + +SW T+I+GY G A + ++ M EEGE++ ++ + AC
Sbjct: 403 ARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIME-EEGEIAANQGTWVSVLPAC 461
Query: 219 ASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWN 278
+ G+ G +LH ++ +G ++ V+ S+ DMY +C +A F ++ + +++ WN
Sbjct: 462 SQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWN 521
Query: 279 TLIA 282
TLIA
Sbjct: 522 TLIA 525
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 138/297 (46%), Gaps = 17/297 (5%)
Query: 13 DFRPAPSVVLHHRTQLNDSPFRPKDLT-GLTTD------LIKSYFDKGSIQEAHTLFDEM 65
D+R PSV+ RT ++ + L G D LI Y ++ A LFDEM
Sbjct: 152 DYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEM 211
Query: 66 THRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRP-NAFTLSAVLKACKGLRALFCG 124
RD+ +W AMI+GY + A L +G+R ++ T+ ++L AC G
Sbjct: 212 PVRDMGSWNAMISGYCQSGNAKEALT-----LSNGLRAMDSVTVVSLLSACTEAGDFNRG 266
Query: 125 ELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYT 184
H ++K G S ++V N L+D+YA D + VF+ + ++ +SW ++I Y
Sbjct: 267 VTIHSYSIKHGLE-SELFVSNKLIDLYAEFGRLRD-CQKVFDRMYVRDLISWNSIIKAYE 324
Query: 185 HRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHG-FQSNL 243
+ +F++M L + + S + +G + + + G F ++
Sbjct: 325 LNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDI 384
Query: 244 PVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF-ETLDSKESLCIFSLM 299
+ N+++ MY + A+ F + D I+WNT+I+G+ + + E++ ++++M
Sbjct: 385 TIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIM 441
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 115/250 (46%), Gaps = 6/250 (2%)
Query: 36 KDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPR 95
+D+T + ++ Y G + A +F+ + + DV++W +I+GY S A +++
Sbjct: 382 EDIT-IGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNI 440
Query: 96 MLRDG-VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATC 154
M +G + N T +VL AC AL G HG +K G ++V +L DMY C
Sbjct: 441 MEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLY-LDVFVVTSLADMYGKC 499
Query: 155 CDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA 214
++ A +F I N+V W TLI + G + +F++M+ E + +F
Sbjct: 500 -GRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTL 558
Query: 215 VSACASVGSGILGKQ-LHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT-QK 272
+SAC+ G G+ ++G +L ++DMY R A +F M+ Q
Sbjct: 559 LSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQP 618
Query: 273 DTITWNTLIA 282
D W L++
Sbjct: 619 DASIWGALLS 628
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 123/260 (47%), Gaps = 3/260 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L T L+++ G + A +FDEM + W + GY + ++ +M G
Sbjct: 45 LLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLG 104
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
VRP+ FT V+KA L CG H VK G G V L+ MY + +
Sbjct: 105 VRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGF-GCLGIVATELVMMYMKFGE-LSS 162
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
A +FE + K+ V+W + G++ L F +M + + F+ +SAC
Sbjct: 163 AEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQ 222
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTL 280
+GS +G++++ N+ V N+ LDM+ +C A+ F EM Q++ ++W+T+
Sbjct: 223 LGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTM 282
Query: 281 IAGFE-TLDSKESLCIFSLM 299
I G+ DS+E+L +F+ M
Sbjct: 283 IVGYAMNGDSREALTLFTTM 302
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 125/247 (50%), Gaps = 6/247 (2%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ T+L+ Y G + A LF+ M +D+VAW A + + + A + F +M D
Sbjct: 146 VATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADA 205
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
V+ ++FT+ ++L AC L +L GE + A K +I V+NA +DM+ C ++ +
Sbjct: 206 VQFDSFTVVSMLSACGQLGSLEIGEEIYDRARK-EEIDCNIIVENARLDMHLKCGNT-EA 263
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
AR++FE++ +N VSW+T+I GY GD+ L +F M E + +F +SAC+
Sbjct: 264 ARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSH 323
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNS---ILDMYCRCRCASEAKQFFCEM-TQKDTIT 276
G GK+ + ++ ++ P ++D+ R EA +F +M + DT
Sbjct: 324 AGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGI 383
Query: 277 WNTLIAG 283
W L+
Sbjct: 384 WGALLGA 390
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 68/157 (43%), Gaps = 24/157 (15%)
Query: 53 GSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVL 112
G+ + A LF+EM R+VV+W+ MI GY A +F M +G+RPN T VL
Sbjct: 259 GNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVL 318
Query: 113 KACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDM------YATCCDSMDRARMVFE 166
AC +H V G R S+ V + ++ YA D + R+ ++ E
Sbjct: 319 SAC-----------SHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEE 367
Query: 167 --DIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVL 201
+ + K V T I G G V R M+L
Sbjct: 368 AYEFIKKMPVEPDTGIWGAL-----LGACAVHRDMIL 399
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 129/261 (49%), Gaps = 35/261 (13%)
Query: 54 SIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLK 113
S+ A+ +F +++ +V +TAMI G+ S + ++ RM+ + V P+ + +++VLK
Sbjct: 76 SVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLK 135
Query: 114 ACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATC------------------- 154
AC C E+ H +K+G GSS V +M++Y
Sbjct: 136 ACD---LKVCREI-HAQVLKLGF-GSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHV 190
Query: 155 -----------CDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEE 203
C + A +F+D+ K+ V WT +I G + L +FR+M +E
Sbjct: 191 AATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMEN 250
Query: 204 GELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAK 263
+ F+ +SAC+ +G+ LG+ +H+ V N + + V N++++MY RC +EA+
Sbjct: 251 VSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEAR 310
Query: 264 QFFCEMTQKDTITWNTLIAGF 284
+ F M KD I++NT+I+G
Sbjct: 311 RVFRVMRDKDVISYNTMISGL 331
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 116/243 (47%), Gaps = 4/243 (1%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
T +I Y + G I+EA LF ++ +D V WTAMI G ++A ++F M + V
Sbjct: 193 TVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVS 252
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
N FT VL AC L AL G H V+ S +V NAL++MY+ C D ++ AR
Sbjct: 253 ANEFTAVCVLSACSDLGALELGRWVHSF-VENQRMELSNFVGNALINMYSRCGD-INEAR 310
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVG 222
VF + K+ +S+ T+I+G G + + FR MV + + ++AC+ G
Sbjct: 311 RVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGG 370
Query: 223 SGILGKQLHAAVIN-HGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM-TQKDTITWNTL 280
+G ++ ++ + + I+D+ R EA +F + + D I TL
Sbjct: 371 LLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTL 430
Query: 281 IAG 283
++
Sbjct: 431 LSA 433
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 132/286 (46%), Gaps = 36/286 (12%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRML-RD 99
+ ++I Y D + +AH +FDEM+ R++V WT M++GYTS ++A +++ RML +
Sbjct: 42 IANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSE 101
Query: 100 GVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMY-------- 151
N F SAVLKAC + + G L + K RG + + N+++DMY
Sbjct: 102 EEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLM-NSVVDMYVKNGRLIE 160
Query: 152 --------------------ATCCDS--MDRARMVFEDIVTKNAVSWTTLITGYTHRGDA 189
+ C + MD A +F + N VSW LI+G+ +G
Sbjct: 161 ANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSP 220
Query: 190 FGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSI 249
L +M E L F+ + AC+ G +GKQLH V+ G +S+ ++++
Sbjct: 221 -RALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISAL 279
Query: 250 LDMYCRCRCASEAKQFFCE---MTQKDTITWNTLIAGFETLDSKES 292
+DMY C A F + WN++++GF + E+
Sbjct: 280 IDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEA 325
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 122/241 (50%), Gaps = 8/241 (3%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
L+ + + G+IQ+AH LF + ++D++A++ +I G +S A+ +F +++ G+ +
Sbjct: 383 LVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDAD 442
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
F +S +LK C L +L G+ HGL +K G + AL+DMY C + +D ++
Sbjct: 443 QFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPV-TATALVDMYVKCGE-IDNGVVL 500
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
F+ ++ ++ VSWT +I G+ G R F +M+ E + +F +SAC SG
Sbjct: 501 FDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRH--SG 558
Query: 225 ILGK---QLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM-TQKDTITWNTL 280
+L + L +G + L ++D+ + EA + +M + D W +L
Sbjct: 559 LLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSL 618
Query: 281 I 281
+
Sbjct: 619 L 619
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 120/242 (49%), Gaps = 6/242 (2%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
LI Y G + EA TLF M +VV+W +I+G+ RA + RM R+G+ +
Sbjct: 179 LISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVD-KGSPRALEFLVRMQREGLVLD 237
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
F L LKAC L G+ H VK G SS + +AL+DMY+ C S+ A V
Sbjct: 238 GFALPCGLKACSFGGLLTMGKQLHCCVVKSGLE-SSPFAISALIDMYSNC-GSLIYAADV 295
Query: 165 F--EDIVTKNAVS-WTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASV 221
F E + ++V+ W ++++G+ + L + Q+ + ++ S A+ C +
Sbjct: 296 FHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINY 355
Query: 222 GSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLI 281
+ LG Q+H+ V+ G++ + V + ++D++ +A + F + KD I ++ LI
Sbjct: 356 VNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLI 415
Query: 282 AG 283
G
Sbjct: 416 RG 417
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 96/178 (53%), Gaps = 3/178 (1%)
Query: 108 LSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFED 167
++A L+ C ++A GE +K G ++++ N ++ MY + A VF++
Sbjct: 8 IAAGLRHCGKVQAFKRGESIQAHVIKQGIS-QNVFIANNVISMYVDF-RLLSDAHKVFDE 65
Query: 168 IVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMV-LEEGELSPFSFSIAVSACASVGSGIL 226
+ +N V+WTT+++GYT G + ++R+M+ EE + F +S + AC VG L
Sbjct: 66 MSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQL 125
Query: 227 GKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
G ++ + + ++ +MNS++DMY + EA F E+ + + +WNTLI+G+
Sbjct: 126 GILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGY 183
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
T L+ Y G I LFD M RDVV+WT +I G+ A++ F +M+ G+
Sbjct: 482 TALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIE 541
Query: 103 PNAFTLSAVLKACK 116
PN T +L AC+
Sbjct: 542 PNKVTFLGLLSACR 555
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 126/245 (51%), Gaps = 6/245 (2%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ T L++ Y GS++ A +FDEM RD+V+W MI ++ H++A ++ RM +G
Sbjct: 144 VATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEG 203
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
V +++TL A+L +C + AL G + H +A I S ++V NAL+DMYA C S++
Sbjct: 204 VCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCE-SCVFVSNALIDMYAK-CGSLEN 261
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
A VF + ++ ++W ++I GY G + FR+MV + +F + C+
Sbjct: 262 AIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSH 321
Query: 221 VGSGILGKQLHAAVINHGFQ--SNLPVMNSILDMYCRC-RCASEAKQFFCEMTQKDTITW 277
G G + H +++ F N+ ++D+Y R + + + + +D + W
Sbjct: 322 QGLVKEGVE-HFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLW 380
Query: 278 NTLIA 282
TL+
Sbjct: 381 RTLLG 385
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 122/235 (51%), Gaps = 6/235 (2%)
Query: 53 GSIQEAHTLFDEM-THRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGV-RPNAFTLSA 110
GS+ A LFD + W +I G+++ + + + RML V RP+ FT +
Sbjct: 53 GSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNF 112
Query: 111 VLKACKGLRAL-FCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIV 169
LK+C+ ++++ C E+ HG ++ G +I V +L+ Y+ S++ A VF+++
Sbjct: 113 ALKSCERIKSIPKCLEI-HGSVIRSGFLDDAI-VATSLVRCYSAN-GSVEIASKVFDEMP 169
Query: 170 TKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQ 229
++ VSW +I ++H G L ++++M E ++ +S+CA V + +G
Sbjct: 170 VRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVM 229
Query: 230 LHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
LH + +S + V N+++DMY +C A F M ++D +TWN++I G+
Sbjct: 230 LHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGY 284
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 114/235 (48%), Gaps = 6/235 (2%)
Query: 49 YFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTL 108
Y G A +F+ + DVV+W +++G+ + + A RM GV +AFT
Sbjct: 121 YRKAGRFDNALCIFENLVDPDVVSWNTILSGF---DDNQIALNFVVRMKSAGVVFDAFTY 177
Query: 109 SAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDI 168
S L C G G VK G S + V N+ + MY+ S AR VF+++
Sbjct: 178 STALSFCVGSEGFLLGLQLQSTVVKTGLE-SDLVVGNSFITMYSRS-GSFRGARRVFDEM 235
Query: 169 VTKNAVSWTTLITGYTHRGD-AFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILG 227
K+ +SW +L++G + G F + +FR M+ E EL SF+ ++ C L
Sbjct: 236 SFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLA 295
Query: 228 KQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIA 282
+Q+H I G++S L V N ++ Y +C K F +M++++ ++W T+I+
Sbjct: 296 RQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS 350
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 135/266 (50%), Gaps = 15/266 (5%)
Query: 39 TGLTTDL------IKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHS-RAWK 91
TGL +DL I Y GS + A +FDEM+ +D+++W ++++G + A
Sbjct: 203 TGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVV 262
Query: 92 VFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMY 151
+F M+R+GV + + ++V+ C L HGL +K G S + V N LM Y
Sbjct: 263 IFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYE-SLLEVGNILMSRY 321
Query: 152 ATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSF 211
+ C ++ + VF + +N VSWTT+I+ +++ DA + +F M + + +F
Sbjct: 322 SKC-GVLEAVKSVFHQMSERNVVSWTTMIS--SNKDDA---VSIFLNMRFDGVYPNEVTF 375
Query: 212 SIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQ 271
++A G ++H I GF S V NS + +Y + +AK+ F ++T
Sbjct: 376 VGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITF 435
Query: 272 KDTITWNTLIAGF-ETLDSKESLCIF 296
++ I+WN +I+GF + S E+L +F
Sbjct: 436 REIISWNAMISGFAQNGFSHEALKMF 461
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 125/244 (51%), Gaps = 10/244 (4%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
L+ Y G ++ ++F +M+ R+VV+WT MI+ ++ A +F M DGV PN
Sbjct: 317 LMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS-----SNKDDAVSIFLNMRFDGVYPN 371
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
T ++ A K + G HGL +K G S V N+ + +YA ++++ A+
Sbjct: 372 EVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFV-SEPSVGNSFITLYAKF-EALEDAKKA 429
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVG-- 222
FEDI + +SW +I+G+ G + L++F E + ++F ++A A
Sbjct: 430 FEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMP-NEYTFGSVLNAIAFAEDI 488
Query: 223 SGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIA 282
S G++ HA ++ G S V +++LDMY + E+++ F EM+QK+ W ++I+
Sbjct: 489 SVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIIS 548
Query: 283 GFET 286
+ +
Sbjct: 549 AYSS 552
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 119/249 (47%), Gaps = 13/249 (5%)
Query: 58 AHTLFDEMTHRD-VVAWTAMITGYTSCNHHSRAWKVFPRMLRDGV---RPNAFTLSAVLK 113
AH LFD + R+ + I+ N +RA +F L+ G + TL LK
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 114 ACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNA 173
AC+G C HG + G S + V NA+M MY D A +FE++V +
Sbjct: 87 ACRGDLKRGCQ--IHGFSTTSGFT-SFVCVSNAVMGMYRKA-GRFDNALCIFENLVDPDV 142
Query: 174 VSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAA 233
VSW T+++G+ A L +M F++S A+S C +LG QL +
Sbjct: 143 VSWNTILSGFDDNQIA---LNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQST 199
Query: 234 VINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF--ETLDSKE 291
V+ G +S+L V NS + MY R A++ F EM+ KD I+WN+L++G E E
Sbjct: 200 VVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFE 259
Query: 292 SLCIFSLMV 300
++ IF M+
Sbjct: 260 AVVIFRDMM 268
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 108/219 (49%), Gaps = 6/219 (2%)
Query: 54 SIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLK 113
++++A F+++T R++++W AMI+G+ A K+F + + PN +T +VL
Sbjct: 422 ALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLN 480
Query: 114 ACKGLRALFC--GELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTK 171
A + G+ H +K+G + V +AL+DMYA + +D + VF ++ K
Sbjct: 481 AIAFAEDISVKQGQRCHAHLLKLGLNSCPV-VSSALLDMYAKRGN-IDESEKVFNEMSQK 538
Query: 172 NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLH 231
N WT++I+ Y+ GD + +F +M+ E +F ++AC G G ++
Sbjct: 539 NQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIF 598
Query: 232 AAVIN-HGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM 269
+I + + + + ++DM R EA++ E+
Sbjct: 599 NMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEV 637
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+++ L+ Y +G+I E+ +F+EM+ ++ WT++I+ Y+S +F +M+++
Sbjct: 511 VSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKEN 570
Query: 101 VRPNAFTLSAVLKAC--KGL 118
V P+ T +VL AC KG+
Sbjct: 571 VAPDLVTFLSVLTACNRKGM 590
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 130/278 (46%), Gaps = 35/278 (12%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L L+K Y + G+ A +F M H DV ++ MI GY A K++ +M+ DG
Sbjct: 168 LWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDG 227
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIG-ARGSSIYVDNALMDMYATCCDS-- 157
+ P+ +T+ ++L C L + G+ HG + G S++ + NAL+DMY C +S
Sbjct: 228 IEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGL 287
Query: 158 ----------------------------MDRARMVFEDIVTKNAVSWTTLITGYTHRG-D 188
M+ A+ VF+ + ++ VSW +L+ GY+ +G D
Sbjct: 288 AKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCD 347
Query: 189 AFGGLRVFRQMVLEEGELSPFSFSIA--VSACASVGSGILGKQLHAAVINHGFQSNLPVM 246
+F +M + E ++ P ++ +S A+ G G+ +H VI + + +
Sbjct: 348 QRTVRELFYEMTIVE-KVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLS 406
Query: 247 NSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
++++DMYC+C A F T+KD W ++I G
Sbjct: 407 SALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGL 444
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 122/237 (51%), Gaps = 14/237 (5%)
Query: 34 RPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTS--CNHHSRAWK 91
+ KD+ T ++ + G ++ A +FD+M RD+V+W +++ GY+ C+ +
Sbjct: 296 KKKDMRSWNT-MVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVREL 354
Query: 92 VFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMY 151
+ + + V+P+ T+ +++ L G HGL +++ +G + ++ +AL+DMY
Sbjct: 355 FYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDA-FLSSALIDMY 413
Query: 152 ATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSF 211
C ++RA MVF+ K+ WT++ITG G+ L++F +M EEG ++P +
Sbjct: 414 CKC-GIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQ-EEG-VTPNNV 470
Query: 212 SIAVSACASVGSGILGKQLHAAVINH-----GFQSNLPVMNSILDMYCRCRCASEAK 263
++ A SG++ + LH V NH GF S++D+ CR EAK
Sbjct: 471 TLLAVLTACSHSGLVEEGLH--VFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAK 525
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 112/238 (47%), Gaps = 9/238 (3%)
Query: 58 AHTLFDEMT-HRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACK 116
A LF T + +V + MI+ +S + + ++ M+R V P+ T ++KA
Sbjct: 87 AKLLFLNFTPNPNVFVYNTMISAVSSSKNE--CFGLYSSMIRHRVSPDRQTFLYLMKASS 144
Query: 117 GLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSW 176
L + + H + G Y+ N+L+ Y + A VF + + S+
Sbjct: 145 FLSEV---KQIHCHIIVSGCLSLGNYLWNSLVKFYMEL-GNFGVAEKVFARMPHPDVSSF 200
Query: 177 TTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVIN 236
+I GY +G + L+++ +MV + E ++ + C + LGK +H +
Sbjct: 201 NVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIER 260
Query: 237 HG--FQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLDSKES 292
G + SNL + N++LDMY +C+ + AK+ F M +KD +WNT++ GF L E+
Sbjct: 261 RGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEA 318
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 132/251 (52%), Gaps = 4/251 (1%)
Query: 52 KGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAV 111
+ S+ A ++F + + MI GY + A + M++ G P+ FT +
Sbjct: 79 ENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCL 138
Query: 112 LKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTK 171
LKAC L+++ G+ HG K+G + ++V N+L++MY C + M+ + VFE + +K
Sbjct: 139 LKACTRLKSIREGKQIHGQVFKLGLE-ADVFVQNSLINMYGRCGE-MELSSAVFEKLESK 196
Query: 172 NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSI-AVSACASVGSGILGKQL 230
A SW+++++ G L +FR M E + S + A+ ACA+ G+ LG +
Sbjct: 197 TAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSI 256
Query: 231 HAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLDSK 290
H ++ + + N+ V S++DMY +C C +A F +M +++ +T++ +I+G
Sbjct: 257 HGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEG 316
Query: 291 ES-LCIFSLMV 300
ES L +FS M+
Sbjct: 317 ESALRMFSKMI 327
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 112/245 (45%), Gaps = 5/245 (2%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRD- 99
+ LI Y G ++ + +F+++ + +W++M++ S +F M +
Sbjct: 169 VQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSET 228
Query: 100 GVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD 159
++ + + L AC AL G HG ++ +I V +L+DMY C +D
Sbjct: 229 NLKAEESGMVSALLACANTGALNLGMSIHGFLLR-NISELNIIVQTSLVDMYVKC-GCLD 286
Query: 160 RARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACA 219
+A +F+ + +N ++++ +I+G G+ LR+F +M+ E E + ++AC+
Sbjct: 287 KALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACS 346
Query: 220 SVGSGILGKQLHAAVINHG-FQSNLPVMNSILDMYCRCRCASEAKQFFCEM-TQKDTITW 277
G G+++ A ++ G + ++D+ R EA + + +K+ + W
Sbjct: 347 HSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIW 406
Query: 278 NTLIA 282
T ++
Sbjct: 407 RTFLS 411
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 118/240 (49%), Gaps = 2/240 (0%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
++K+Y G I EA LF + D+ W MI GY C + +F M G +PN
Sbjct: 147 IVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPN 206
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
+T+ A+ L H +KI S YV AL++MY+ C + A V
Sbjct: 207 CYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHS-YVGCALVNMYSRCM-CIASACSV 264
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
F I + V+ ++LITGY+ G+ L +F ++ + + +I + +CA +
Sbjct: 265 FNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDS 324
Query: 225 ILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
+ GK++H+ VI G + ++ V ++++DMY +C A F + +K+ +++N+LI G
Sbjct: 325 VSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGL 384
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 128/299 (42%), Gaps = 24/299 (8%)
Query: 6 RKFLPRIDFRPAPSVVLHHRTQLNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEM 65
RK R++ + S V +++L P+ T L + Y + A LFD
Sbjct: 16 RKIQTRLNTQKLHSFVT--KSKLARDPY-------FATQLARFYALNDDLISARKLFDVF 66
Query: 66 THRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKA------CKGLR 119
R V W ++I Y + + +F ++LR RP+ FT + + + KGLR
Sbjct: 67 PERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLR 126
Query: 120 ALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTL 179
+ HG+A+ + G +A++ Y+ ++ +++ F I + W +
Sbjct: 127 CI------HGIAI-VSGLGFDQICGSAIVKAYSKAGLIVEASKL-FCSIPDPDLALWNVM 178
Query: 180 ITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGF 239
I GY G G+ +F M + + ++ S ++ +HA +
Sbjct: 179 ILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINL 238
Query: 240 QSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETL-DSKESLCIFS 297
S+ V ++++MY RC C + A F +++ D + ++LI G+ + KE+L +F+
Sbjct: 239 DSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFA 297
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 126/256 (49%), Gaps = 6/256 (2%)
Query: 28 LNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHS 87
L D P D++ +IK Y G + A TLF +M ++ ++WT MI+GY + +
Sbjct: 172 LFDRIPEPDDVSW--NSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNK 229
Query: 88 RAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNAL 147
A ++F M V P+ +L+ L AC L AL G+ H K R S+ + L
Sbjct: 230 EALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSV-LGCVL 288
Query: 148 MDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELS 207
+DMYA C + M+ A VF++I K+ +WT LI+GY + G + F +M + +
Sbjct: 289 IDMYAKCGE-MEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPN 347
Query: 208 PFSFSIAVSACASVGSGILGKQL-HAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFF 266
+F+ ++AC+ G GK + ++ ++ + + I+D+ R EAK+F
Sbjct: 348 VITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFI 407
Query: 267 CEMTQK-DTITWNTLI 281
EM K + + W L+
Sbjct: 408 QEMPLKPNAVIWGALL 423
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 113/257 (43%), Gaps = 31/257 (12%)
Query: 58 AHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKG 117
A +FD D W MI G++ + R+ ++ RML NA+T ++LKAC
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSN 127
Query: 118 LRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCD--------------------- 156
L A H K+G + +Y N+L++ YA +
Sbjct: 128 LSAFEETTQIHAQITKLGYE-NDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNS 186
Query: 157 ---------SMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELS 207
MD A +F + KNA+SWTT+I+GY L++F +M + E
Sbjct: 187 VIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPD 246
Query: 208 PFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFC 267
S + A+SACA +G+ GK +H+ + + + + ++DMY +C EA + F
Sbjct: 247 NVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFK 306
Query: 268 EMTQKDTITWNTLIAGF 284
+ +K W LI+G+
Sbjct: 307 NIKKKSVQAWTALISGY 323
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/133 (20%), Positives = 68/133 (51%)
Query: 152 ATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSF 211
+T D + A++VF+ + W +I G++ + L ++++M+ + ++F
Sbjct: 59 STSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTF 118
Query: 212 SIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQ 271
+ AC+++ + Q+HA + G+++++ +NS+++ Y A F + +
Sbjct: 119 PSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPE 178
Query: 272 KDTITWNTLIAGF 284
D ++WN++I G+
Sbjct: 179 PDDVSWNSVIKGY 191
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 138/292 (47%), Gaps = 39/292 (13%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L L ++Y G I+ + LF + D+ +TA I + +A+ ++ ++L
Sbjct: 66 LNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSE 125
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCD---- 156
+ PN FT S++LK+C + G+L H +K G G YV L+D+YA D
Sbjct: 126 INPNEFTFSSLLKSC----STKSGKLIHTHVLKFGL-GIDPYVATGLVDVYAKGGDVVSA 180
Query: 157 --------------------------SMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAF 190
+++ AR +F+ + ++ VSW +I GY G
Sbjct: 181 QKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPN 240
Query: 191 GGLRVFRQMVLEEGELSPFSFSI--AVSACASVGSGILGKQLHAAVINHGFQSNLPVMNS 248
L +F Q +L EG+ P ++ A+SAC+ +G+ G+ +H V + + N+ V
Sbjct: 241 DALMLF-QKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTG 299
Query: 249 ILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLD-SKESLCIFSLM 299
++DMY +C EA F + +KD + WN +IAG+ S+++L +F+ M
Sbjct: 300 LIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEM 351
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 138/290 (47%), Gaps = 24/290 (8%)
Query: 20 VVLHHRTQLNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITG 79
+ LHH + P+ L LI Y G+I A +FD M R+VV+WTA+ITG
Sbjct: 79 INLHH--HMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITG 136
Query: 80 YTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGS 139
Y + + +F ML PN FTLS+VL +C+ G+ HGLA+K+G
Sbjct: 137 YVQAGNEQEGFCLFSSMLSHCF-PNEFTLSSVLTSCR----YEPGKQVHGLALKLGLH-C 190
Query: 140 SIYVDNALMDMYATCCD--SMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFR 197
SIYV NA++ MY C D + A VFE I KN V+W ++I + + VF
Sbjct: 191 SIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFM 250
Query: 198 QMVLEEGELSPFSFSIAVSACASV--GSGILGK-------QLHAAVINHGFQSNLPVMNS 248
+M + F + ++ C+S+ S ++ QLH+ + G + V +
Sbjct: 251 RM---HSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATA 307
Query: 249 ILDMYCR-CRCASEAKQFFCEMTQ-KDTITWNTLIAGFETLDSKESLCIF 296
++ +Y ++ + F EM+ +D + WN +I F D + ++ +F
Sbjct: 308 LIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDPERAIHLF 357
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 128/252 (50%), Gaps = 18/252 (7%)
Query: 39 TGLTTDLIKSYFDK-GSIQEAHTLFDEMTH-RDVVAWTAMITGYTSCNHHSRAWKVFPRM 96
T + T LIK Y + + + LF EM+H RD+VAW +IT + + RA +F ++
Sbjct: 302 TEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDP-ERAIHLFGQL 360
Query: 97 LRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCD 156
++ + P+ +T S+VLKAC GL H +K G ++ ++N+L+ YA C
Sbjct: 361 RQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTV-LNNSLIHAYAKC-G 418
Query: 157 SMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFS--FSIA 214
S+D VF+D+ +++ VSW +++ Y+ G L VF++M +++P S F
Sbjct: 419 SLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM-----DINPDSATFIAL 473
Query: 215 VSACASVGSGILGKQLHAAVINHGFQSNLPVMNS---ILDMYCRCRCASEAKQFFCEM-T 270
+SAC+ G G ++ ++ LP +N ++DM R +EA++ +M
Sbjct: 474 LSACSHAGRVEEGLRIFRSMFEK--PETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPM 531
Query: 271 QKDTITWNTLIA 282
D + W L+
Sbjct: 532 DPDAVVWIALLG 543
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 118/246 (47%), Gaps = 19/246 (7%)
Query: 51 DKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSA 110
D + EA T+F+ + +++V W +MI + CN +A VF RM DGV F +
Sbjct: 207 DGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGV---GFDRAT 263
Query: 111 VLKACKGLRA---LFCGELA------HGLAVKIGARGSSIYVDNALMDMYATCC-DSMDR 160
+L C L L E++ H L VK G + V AL+ +Y+ D D
Sbjct: 264 LLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLV-TQTEVATALIKVYSEMLEDYTDC 322
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAVSAC 218
++ E ++ V+W +IT + D + +F Q L + +LSP ++FS + AC
Sbjct: 323 YKLFMEMSHCRDIVAWNGIITAFAVY-DPERAIHLFGQ--LRQEKLSPDWYTFSSVLKAC 379
Query: 219 ASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWN 278
A + + +HA VI GF ++ + NS++ Y +C + F +M +D ++WN
Sbjct: 380 AGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWN 439
Query: 279 TLIAGF 284
+++ +
Sbjct: 440 SMLKAY 445
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 122/251 (48%), Gaps = 9/251 (3%)
Query: 38 LTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRML 97
L + L+ Y + G + A+ +FD+M +D+VAW ++I G+ A ++ M
Sbjct: 22 LIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMN 81
Query: 98 RDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDS 157
G++P+ FT+ ++L AC + AL G+ H +K+G +++ N L+D+YA C
Sbjct: 82 SKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLT-RNLHSSNVLLDLYAR-CGR 139
Query: 158 MDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEG----ELSPFSFSI 213
++ A+ +F+++V KN+VSWT+LI G G + +F+ M EG E++
Sbjct: 140 VEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILY 199
Query: 214 AVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM-TQK 272
A S C V G + + + + ++D+ R +A ++ M Q
Sbjct: 200 ACSHCGMVKEGF--EYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQP 257
Query: 273 DTITWNTLIAG 283
+ + W TL+
Sbjct: 258 NVVIWRTLLGA 268
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 99/181 (54%), Gaps = 7/181 (3%)
Query: 124 GELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGY 183
GE H + ++ G GS IYV N+L+ +YA C D + A VF+ + K+ V+W ++I G+
Sbjct: 7 GETIHSVVIRSGF-GSLIYVQNSLLHLYANCGD-VASAYKVFDKMPEKDLVAWNSVINGF 64
Query: 184 THRGDAFGGLRVFRQMVLEEGELSPFSFSIA--VSACASVGSGILGKQLHAAVINHGFQS 241
G L ++ +M + P F+I +SACA +G+ LGK++H +I G
Sbjct: 65 AENGKPEEALALYTEM--NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR 122
Query: 242 NLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLD-SKESLCIFSLMV 300
NL N +LD+Y RC EAK F EM K++++W +LI G KE++ +F M
Sbjct: 123 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 182
Query: 301 S 301
S
Sbjct: 183 S 183
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 226 LGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF- 284
LG+ +H+ VI GF S + V NS+L +Y C + A + F +M +KD + WN++I GF
Sbjct: 6 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 65
Query: 285 ETLDSKESLCIFSLMVS 301
E +E+L +++ M S
Sbjct: 66 ENGKPEEALALYTEMNS 82
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 71/165 (43%), Gaps = 21/165 (12%)
Query: 39 TGLTTDLIKS------YFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKV 92
GLT +L S Y G ++EA TLFDEM ++ V+WT++I G A ++
Sbjct: 118 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIEL 177
Query: 93 FPRMLR-DGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMY 151
F M +G+ P T +L AC CG + G + R Y ++ +
Sbjct: 178 FKYMESTEGLLPCEITFVGILYACS-----HCGMVKEGF--EYFRRMREEYKIEPRIEHF 230
Query: 152 ATCCDSMDRARMV---FEDI----VTKNAVSWTTLITGYTHRGDA 189
D + RA V +E I + N V W TL+ T GD+
Sbjct: 231 GCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDS 275
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 143/293 (48%), Gaps = 39/293 (13%)
Query: 44 DLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRP 103
+L+K + D I+ AH +FDE+ DV++ TA+I + + H A + F R+L G+RP
Sbjct: 33 ELVK-HIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRP 91
Query: 104 NAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARM 163
N FT V+ + R + G+ H A+K+G S+++V +A+++ Y D AR
Sbjct: 92 NEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGL-ASNVFVGSAVLNCYVKLSTLTD-ARR 149
Query: 164 VFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQM------------------------ 199
F+D N VS T LI+GY + + L +FR M
Sbjct: 150 CFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEA 209
Query: 200 ------VLEEGELSP--FSFSIAVSACASVGSGILGKQLHAAVINH-GFQSNLPVMNSIL 250
+L EG + P +F A++A +++ S GK +HA I G + N+ V NS++
Sbjct: 210 VNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLI 269
Query: 251 DMYCRCRCASEAKQFF--CEMTQKDTITWNTLIAGF-ETLDSKESLCIFSLMV 300
Y +C ++ F E Q++ ++WN++I G+ +E++ +F MV
Sbjct: 270 SFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMV 322
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 117/257 (45%), Gaps = 11/257 (4%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
T+LI Y K +EA +LF M R VV W A+I G++ + A F MLR+GV
Sbjct: 163 TNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVV 222
Query: 103 -PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRA 161
PN T + A + + G+ H A+K + +++V N+L+ Y+ C + M+ +
Sbjct: 223 IPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGN-MEDS 281
Query: 162 RMVFEDI--VTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSI--AVSA 217
+ F + +N VSW ++I GY H G + +F +MV ++ L P + +I + A
Sbjct: 282 LLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMV-KDTNLRPNNVTILGVLFA 340
Query: 218 CASVGSGILGKQLHAAVINHGFQSNLPVMNS---ILDMYCRCRCASEAKQFFCEMTQKDT 274
C G G +N NL + ++DM R EA++ M
Sbjct: 341 CNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPG 400
Query: 275 IT-WNTLIAGFETLDSK 290
I W L+ G + +K
Sbjct: 401 IGFWKALLGGCQIHSNK 417
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 128/293 (43%), Gaps = 40/293 (13%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
T +I + ++ A FD M + VV+W AM++GY A ++F MLR GVR
Sbjct: 202 TVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVR 261
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSI--YVDNALMDMYATCCD---- 156
PN T V+ AC RA L L I + + +V AL+DM+A C D
Sbjct: 262 PNETTWVIVISAC-SFRA--DPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSA 318
Query: 157 ---------------------------SMDRARMVFEDIVTKNAVSWTTLITGYTHRGDA 189
M AR +F+ + +N VSW +LI GY H G A
Sbjct: 319 RRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQA 378
Query: 190 FGGLRVFRQMVLEEGELSPFSFSI--AVSACASVGSGILGKQLHAAVINHGFQSNLPVMN 247
+ F M+ + G+ P ++ +SAC + LG + + + + N
Sbjct: 379 ALAIEFFEDMI-DYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYR 437
Query: 248 SILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETL-DSKESLCIFSLM 299
S++ MY R EAK+ F EM ++D +++NTL F D E+L + S M
Sbjct: 438 SLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKM 490
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 96/197 (48%), Gaps = 11/197 (5%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG-VRP 103
+I Y G + A LFD M R+VV+W ++I GY + A + F M+ G +P
Sbjct: 337 MISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKP 396
Query: 104 NAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNA----LMDMYATCCDSMD 159
+ T+ +VL AC + +L G + R + I ++++ L+ MYA + +
Sbjct: 397 DEVTMISVLSACGHM-----ADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWE 451
Query: 160 RARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACA 219
A+ VF+++ ++ VS+ TL T + GD L + +M E E +++ ++AC
Sbjct: 452 -AKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACN 510
Query: 220 SVGSGILGKQLHAAVIN 236
G G+++ ++ N
Sbjct: 511 RAGLLKEGQRIFKSIRN 527
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 100/272 (36%), Gaps = 73/272 (26%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
++ Y S++ A +FD+++ R W MI+GY + A K+F M + V
Sbjct: 142 IMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSW 201
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
++ K ++ AR
Sbjct: 202 TVMITGFAKV-----------------------------------------KDLENARKY 220
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
F+ + K+ VSW +++GY G LR+F M+ + ++ I +SAC+
Sbjct: 221 FDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADP 280
Query: 225 ILGKQL----------------------HAA---------VINH-GFQSNLPVMNSILDM 252
L + L HA + N G Q NL N+++
Sbjct: 281 SLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISG 340
Query: 253 YCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
Y R S A+Q F M +++ ++WN+LIAG+
Sbjct: 341 YTRIGDMSSARQLFDTMPKRNVVSWNSLIAGY 372
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 94/224 (41%), Gaps = 46/224 (20%)
Query: 61 LFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRA 120
+FD +T +V +M ++ + + +++ + R G+ P+AF+ V+K+
Sbjct: 62 IFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGI 121
Query: 121 LFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLI 180
LF L K+G YV N +MDMY +S++ AR VF+ I + W +I
Sbjct: 122 LF-----QALVEKLGFFKDP-YVRNVIMDMYVK-HESVESARKVFDQISQRKGSDWNVMI 174
Query: 181 TGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQ 240
+GY G+ ++F M E S+++ ++ A V K L
Sbjct: 175 SGYWKWGNKEEACKLFDMM----PENDVVSWTVMITGFAKV------KDLE--------- 215
Query: 241 SNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
A+++F M +K ++WN +++G+
Sbjct: 216 --------------------NARKYFDRMPEKSVVSWNAMLSGY 239
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 22/136 (16%)
Query: 21 VLHHRTQLNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGY 80
+ ++ +LNDS +R LI Y G++ EA +FDEM RDVV++ + T +
Sbjct: 424 IRKNQIKLNDSGYRS---------LIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAF 474
Query: 81 TSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSS 140
+ + +M +G+ P+ T ++VL AC RA G L G + R
Sbjct: 475 AANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACN--RA---GLLKEGQRIFKSIR--- 526
Query: 141 IYVDNALMDMYATCCD 156
N L D YA C D
Sbjct: 527 ----NPLADHYA-CMD 537
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 153 TCCDSMDRA-----RMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELS 207
+CC + RA R++F+ + N ++ ++ A LR++ Q
Sbjct: 47 SCCTRL-RAPSYYTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPD 105
Query: 208 PFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFC 267
FSF + + + +G G A V GF + V N I+DMY + A++ F
Sbjct: 106 AFSFPVVIKS-----AGRFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFD 160
Query: 268 EMTQKDTITWNTLIAGFETLDSKESLC-IFSLM 299
+++Q+ WN +I+G+ +KE C +F +M
Sbjct: 161 QISQRKGSDWNVMISGYWKWGNKEEACKLFDMM 193
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 127/260 (48%), Gaps = 5/260 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ + LI SY G + +F +T RD+ W ++I + S ++R+ F ML G
Sbjct: 61 VASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSG 120
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
P+ FT V+ AC L G HGL +K G + V + + Y+ C D
Sbjct: 121 QSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQD- 179
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGEL---SPFSFSIAVSA 217
A +VF+++ ++ V+WT +I+G+ G++ GGL +M ++ +P + A
Sbjct: 180 ACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQA 239
Query: 218 CASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITW 277
C+++G+ G+ LH + +G S+ V +S+ Y + SEA F E+ +D +W
Sbjct: 240 CSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSW 299
Query: 278 NTLIAGF-ETLDSKESLCIF 296
++IA + D +ES +F
Sbjct: 300 TSIIASLARSGDMEESFDMF 319
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 117/250 (46%), Gaps = 6/250 (2%)
Query: 39 TGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLR 98
T + + Y G +Q+A +FDEM RDVVAWTA+I+G+ +M
Sbjct: 161 TAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHS 220
Query: 99 DGV---RPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCC 155
G +PN TL +AC L AL G HG AVK G SS +V +++ Y+
Sbjct: 221 AGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGL-ASSKFVQSSMFSFYSKSG 279
Query: 156 DSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAV 215
+ A + F ++ ++ SWT++I GD +F +M + S +
Sbjct: 280 NP-SEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLI 338
Query: 216 SACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK-DT 274
+ + GK H VI H F + V NS+L MYC+ S A++ FC ++++ +
Sbjct: 339 NELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNK 398
Query: 275 ITWNTLIAGF 284
WNT++ G+
Sbjct: 399 EAWNTMLKGY 408
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 121/250 (48%), Gaps = 9/250 (3%)
Query: 37 DLT-GLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPR 95
DLT + LI Y G + A +F E +V+ W AMI Y C +A +F R
Sbjct: 465 DLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDR 523
Query: 96 MLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCC 155
M+ + +P++ TL +L AC +L G++ H + ++ + AL+DMYA C
Sbjct: 524 MVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITET-EHEMNLSLSAALIDMYAKC- 581
Query: 156 DSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPF--SFSI 213
++++R +F+ K+AV W +I+GY GD + +F QM EE ++ P +F
Sbjct: 582 GHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQM--EESDVKPTGPTFLA 639
Query: 214 AVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT-QK 272
+SAC G GK+L + + + NL + ++D+ R EA+ M
Sbjct: 640 LLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSP 699
Query: 273 DTITWNTLIA 282
D + W TL++
Sbjct: 700 DGVIWGTLLS 709
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 105/213 (49%), Gaps = 3/213 (1%)
Query: 72 AWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLA 131
AW M+ GY H + ++F ++ G+ ++ + ++V+ +C + A+ G+ H
Sbjct: 400 AWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYV 459
Query: 132 VKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFG 191
VK + +I V N+L+D+Y D RM E N ++W +I Y H +
Sbjct: 460 VKT-SLDLTISVVNSLIDLYGKMGDLTVAWRMFCE--ADTNVITWNAMIASYVHCEQSEK 516
Query: 192 GLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILD 251
+ +F +MV E + S + + AC + GS G+ +H + + NL + +++D
Sbjct: 517 AIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALID 576
Query: 252 MYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
MY +C ++++ F QKD + WN +I+G+
Sbjct: 577 MYAKCGHLEKSRELFDAGNQKDAVCWNVMISGY 609
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 130/279 (46%), Gaps = 41/279 (14%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDV------------------------------ 70
+ T LI+ YF G + +A +FDEM +DV
Sbjct: 153 VVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWV 212
Query: 71 ---VAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELA 127
V+WT +I+GY S A +VF RML + V P+ TL AVL AC L +L EL
Sbjct: 213 RNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSL---ELG 269
Query: 128 HGLAVKIGARG--SSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTH 185
+ + RG ++ ++NA++DMYA ++ +A VFE + +N V+WTT+I G
Sbjct: 270 ERICSYVDHRGMNRAVSLNNAVIDMYAK-SGNITKALDVFECVNERNVVTWTTIIAGLAT 328
Query: 186 RGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAV-INHGFQSNLP 244
G L +F +MV + +F +SAC+ VG LGK+L ++ +G N+
Sbjct: 329 HGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIE 388
Query: 245 VMNSILDMYCRCRCASEAKQFFCEMTQK-DTITWNTLIA 282
++D+ R EA + M K + W +L+A
Sbjct: 389 HYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLA 427
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 139/305 (45%), Gaps = 43/305 (14%)
Query: 38 LTGLTTD------LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYT---SCNHHSR 88
+TGL D I++ + G ++ A+++F + MI + N HS
Sbjct: 40 ITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSI 99
Query: 89 AWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALM 148
A V+ ++ +P+ FT VLK + ++ G HG V G SS++V L+
Sbjct: 100 AITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGF-DSSVHVVTGLI 158
Query: 149 DMYATC------------------------------CDSMDRARMVFEDIV--TKNAVSW 176
MY +C MD AR + E + +N VSW
Sbjct: 159 QMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSW 218
Query: 177 TTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVIN 236
T +I+GY G A + VF++M++E E + +SACA +GS LG+++ + V +
Sbjct: 219 TCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDH 278
Query: 237 HGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLD-SKESLCI 295
G + + N+++DMY + ++A F + +++ +TW T+IAG T E+L +
Sbjct: 279 RGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAM 338
Query: 296 FSLMV 300
F+ MV
Sbjct: 339 FNRMV 343
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 16/168 (9%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L +I Y G+I +A +F+ + R+VV WT +I G + H + A +F RM++ G
Sbjct: 287 LNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAG 346
Query: 101 VRPNAFTLSAVLKACKGLRALFCGE-LAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD 159
VRPN T A+L AC + + G+ L + + K G + ++ Y D +
Sbjct: 347 VRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPN--------IEHYGCMIDLLG 398
Query: 160 RARMVFE-DIVTK------NAVSWTTLITGYTHRGDAFGGLRVFRQMV 200
RA + E D V K NA W +L+ D G R +++
Sbjct: 399 RAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELI 446
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 125/248 (50%), Gaps = 9/248 (3%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ L+ Y GS+ ++ +F M RDVV+W MI+ + + M + G
Sbjct: 355 IVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG 414
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
+ + T++A+L A LR G+ H ++ G + + ++ L+DMY+ +
Sbjct: 415 FKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGM--NSYLIDMYSKS-GLIRI 471
Query: 161 ARMVFED--IVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA--VS 216
++ +FE ++ +W ++I+GYT G VFR+M+ E + P + ++A +
Sbjct: 472 SQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKML--EQNIRPNAVTVASILP 529
Query: 217 ACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTIT 276
AC+ +GS LGKQLH I N+ V ++++DMY + A+ F + +++++T
Sbjct: 530 ACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVT 589
Query: 277 WNTLIAGF 284
+ T+I G+
Sbjct: 590 YTTMILGY 597
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 124/242 (51%), Gaps = 5/242 (2%)
Query: 61 LFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRA 120
+FD M ++VVAW +I+ Y ++ A + F M+R V+P+ + V A R+
Sbjct: 170 VFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRS 229
Query: 121 LFCGELAHGLAVKIGARG-SSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTL 179
+ + +GL +K+G ++V ++ + MYA D ++ +R VF+ V +N W T+
Sbjct: 230 IKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGD-IESSRRVFDSCVERNIEVWNTM 288
Query: 180 ITGYTHRGDAFGGLRVFRQMVLEEGELS-PFSFSIAVSACASVGSGILGKQLHAAVINHG 238
I Y + +F + + + +S ++ +A SA +++ LG+Q H V +
Sbjct: 289 IGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNF 348
Query: 239 FQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF--ETLDSKESLCIF 296
+ + ++NS++ MY RC ++ F M ++D ++WNT+I+ F LD + + ++
Sbjct: 349 RELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVY 408
Query: 297 SL 298
+
Sbjct: 409 EM 410
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 124/250 (49%), Gaps = 11/250 (4%)
Query: 40 GLTTDLIKSYFDKGSIQEAHTLFDE--MTHRDVVAWTAMITGYTSCNHHSRAWKVFPRML 97
G+ + LI Y G I+ + LF+ RD W +MI+GYT H + + VF +ML
Sbjct: 454 GMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKML 513
Query: 98 RDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDS 157
+RPNA T++++L AC + ++ G+ HG +++ +++V +AL+DMY+ +
Sbjct: 514 EQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIR-QYLDQNVFVASALVDMYSKA-GA 571
Query: 158 MDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAV 215
+ A +F +N+V++TT+I GY G + +F M +E + P +F +
Sbjct: 572 IKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSM--QESGIKPDAITFVAVL 629
Query: 216 SACASVGSGILGKQLHAAVIN-HGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDT 274
SAC+ G G ++ + + Q + I DM R +EA +F + ++
Sbjct: 630 SACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGN 689
Query: 275 IT--WNTLIA 282
I W +L+
Sbjct: 690 IAELWGSLLG 699
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 120/268 (44%), Gaps = 17/268 (6%)
Query: 31 SPFRPKDLTGLTTDLIKSYFDK----GSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHH 86
S F P LT T I+S K G+ Q A LFD + V W +I G+ N
Sbjct: 28 STFSPPTLTPQTPS-IRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLP 86
Query: 87 SRAWKVFPRMLRDGVRPN--AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVD 144
A + RM + N A+T S+ LKAC + L G+ H ++ + SS V
Sbjct: 87 HEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRC-LQNSSRVVH 145
Query: 145 NALMDMYATC-----CDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQM 199
N+LM+MY +C C D R VF+++ KN V+W TLI+ Y G R F M
Sbjct: 146 NSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIM 205
Query: 200 VLEEGELSPFSFSIAVSACASVGSGILGKQLHAAV---INHGFQSNLPVMNSILDMYCRC 256
+ E + SP SF + V S+ I + + + + +L V++S + MY
Sbjct: 206 MRMEVKPSPVSF-VNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAEL 264
Query: 257 RCASEAKQFFCEMTQKDTITWNTLIAGF 284
+++ F +++ WNT+I +
Sbjct: 265 GDIESSRRVFDSCVERNIEVWNTMIGVY 292
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 129/270 (47%), Gaps = 10/270 (3%)
Query: 36 KDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPR 95
KDL + + I Y + G I+ + +FD R++ W MI Y + + ++F
Sbjct: 249 KDLF-VVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLE 307
Query: 96 ML-RDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATC 154
+ + + T A L+ + G HG K R I + N+LM MY+
Sbjct: 308 AIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSK-NFRELPIVIVNSLMVMYSR- 365
Query: 155 CDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA 214
C S+ ++ VF + ++ VSW T+I+ + G GL + +M + ++ + +
Sbjct: 366 CGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTAL 425
Query: 215 VSACASVGSGILGKQLHAAVINHGFQSNLPVMNS-ILDMYCRCRCASEAKQFF--CEMTQ 271
+SA +++ + +GKQ HA +I G Q MNS ++DMY + +++ F +
Sbjct: 426 LSAASNLRNKEIGKQTHAFLIRQGIQ--FEGMNSYLIDMYSKSGLIRISQKLFEGSGYAE 483
Query: 272 KDTITWNTLIAGF-ETLDSKESLCIFSLMV 300
+D TWN++I+G+ + ++++ +F M+
Sbjct: 484 RDQATWNSMISGYTQNGHTEKTFLVFRKML 513
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 122/244 (50%), Gaps = 4/244 (1%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L L+ Y G +Q A LF + RD++ W AMI+GY ++ M ++
Sbjct: 145 LKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNR 204
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
+ P+ +T ++V +AC L L G+ AH + +K + S+I VD+AL+DMY C D
Sbjct: 205 IVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIK-SNIIVDSALVDMYFKCSSFSDG 263
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
R VF+ + T+N ++WT+LI+GY + G L+ F +M E +P +F + ++AC
Sbjct: 264 HR-VFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNH 322
Query: 221 VGSGILG-KQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKD-TITWN 278
G G + ++ ++G + +++D R EA +F + K+ W
Sbjct: 323 GGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWG 382
Query: 279 TLIA 282
+L+
Sbjct: 383 SLLG 386
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 95/185 (51%), Gaps = 2/185 (1%)
Query: 100 GVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD 159
G++ T + +L+ CK + G+ H +G + Y+ L+ +YA D +
Sbjct: 103 GLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGF-ALNEYLKVKLLILYALSGD-LQ 160
Query: 160 RARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACA 219
A ++F + ++ + W +I+GY +G GL ++ M ++F+ AC+
Sbjct: 161 TAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACS 220
Query: 220 SVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNT 279
++ GK+ HA +I +SN+ V ++++DMY +C S+ + F +++ ++ ITW +
Sbjct: 221 ALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTS 280
Query: 280 LIAGF 284
LI+G+
Sbjct: 281 LISGY 285
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 139/291 (47%), Gaps = 17/291 (5%)
Query: 22 LHHRTQ-----LNDSPFR--PKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVV--- 71
LHH + LN+ R PK L + LI + + A +FD++T ++
Sbjct: 147 LHHGIKICSLILNNPSLRHNPK----LLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEK 202
Query: 72 AWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLA 131
W AM GY+ A V+ ML + P F++S LKAC L+ L G H
Sbjct: 203 VWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQI 262
Query: 132 VKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFG 191
VK + + V N L+ +Y D AR VF+ + +N V+W +LI+ + +
Sbjct: 263 VKRKEKVDQV-VYNVLLKLYMES-GLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHE 320
Query: 192 GLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILD 251
+FR+M E S + + + AC+ V + + GK++HA ++ + ++P++NS++D
Sbjct: 321 MFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMD 380
Query: 252 MYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFE-TLDSKESLCIFSLMVS 301
MY +C +++ F M KD +WN ++ + + +E + +F M+
Sbjct: 381 MYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIE 431
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 92/180 (51%), Gaps = 6/180 (3%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
L+K Y + G +A +FD M+ R+VV W ++I+ + + +F +M + + +
Sbjct: 277 LLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFS 336
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
TL+ +L AC + AL G+ H +K + + N+LMDMY C + ++ +R V
Sbjct: 337 WATLTTILPACSRVAALLTGKEIHAQILK-SKEKPDVPLLNSLMDMYGKCGE-VEYSRRV 394
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAVSACASVG 222
F+ ++TK+ SW ++ Y G+ + +F M+ E ++P +F +S C+ G
Sbjct: 395 FDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMI--ESGVAPDGITFVALLSGCSDTG 452
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 91/183 (49%), Gaps = 6/183 (3%)
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
P A+T +L AC ++L G L + + + + + L+ +++ C +D AR
Sbjct: 131 PEAYT--DLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVC-RRLDLAR 187
Query: 163 MVFEDIVTKNAVS---WTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACA 219
+F+D+ + ++ W + GY+ G L V+ M+ E FS S+A+ AC
Sbjct: 188 KIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACV 247
Query: 220 SVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNT 279
+ +G+ +HA ++ + + V N +L +Y +A++ F M++++ +TWN+
Sbjct: 248 DLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNS 307
Query: 280 LIA 282
LI+
Sbjct: 308 LIS 310
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 130/260 (50%), Gaps = 16/260 (6%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
++ Y + ++A + FD M +D +W MITGY +A ++F M+ N
Sbjct: 130 MLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEK----N 185
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
+ +A++ + CG+L A + A++ Y ++ A +
Sbjct: 186 EVSWNAMISG-----YIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKA-KKVELAEAM 239
Query: 165 FEDI-VTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFS--FSIAVSACASV 221
F+D+ V KN V+W +I+GY GL++FR M LEEG + P S S A+ C+ +
Sbjct: 240 FKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAM-LEEG-IRPNSSGLSSALLGCSEL 297
Query: 222 GSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLI 281
+ LG+Q+H V +++ + S++ MYC+C +A + F M +KD + WN +I
Sbjct: 298 SALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMI 357
Query: 282 AGF-ETLDSKESLCIFSLMV 300
+G+ + ++ ++LC+F M+
Sbjct: 358 SGYAQHGNADKALCLFREMI 377
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 91/181 (50%), Gaps = 3/181 (1%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMT-HRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGV 101
T +I Y ++ A +F +MT ++++V W AMI+GY + K+F ML +G+
Sbjct: 221 TAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGI 280
Query: 102 RPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRA 161
RPN+ LS+ L C L AL G H + K + + +L+ MY C + D A
Sbjct: 281 RPNSSGLSSALLGCSELSALQLGRQIHQIVSK-STLCNDVTALTSLISMYCKCGELGD-A 338
Query: 162 RMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASV 221
+FE + K+ V+W +I+GY G+A L +FR+M+ + +F + AC
Sbjct: 339 WKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHA 398
Query: 222 G 222
G
Sbjct: 399 G 399
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 37 DLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRM 96
D+T LT+ LI Y G + +A LF+ M +DVVAW AMI+GY + +A +F M
Sbjct: 318 DVTALTS-LISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREM 376
Query: 97 LRDGVRPNAFTLSAVLKAC 115
+ + +RP+ T AVL AC
Sbjct: 377 IDNKIRPDWITFVAVLLAC 395
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 127/247 (51%), Gaps = 9/247 (3%)
Query: 45 LIKSYFDKGSI-QEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRP 103
L+ Y G I +A+T FD + +DVV+W A+I G++ N + A++ F ML++ P
Sbjct: 163 LVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEP 222
Query: 104 NAFTLSAVLKACKGL-RALFC--GELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
N T++ VL C + + + C G H V+ + ++V N+L+ Y ++
Sbjct: 223 NYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLR-VGRIEE 281
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSI--AVSAC 218
A +F + +K+ VSW +I GY + F ++F +V +G++SP S +I + C
Sbjct: 282 AASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLV-HKGDVSPDSVTIISILPVC 340
Query: 219 ASVGSGILGKQLHAAVINHGF-QSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITW 277
A + GK++H+ ++ H + + V N+++ Y R S A F M+ KD I+W
Sbjct: 341 AQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISW 400
Query: 278 NTLIAGF 284
N ++ F
Sbjct: 401 NAILDAF 407
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 113/238 (47%), Gaps = 9/238 (3%)
Query: 55 IQEAHTLFDEMTHRDVVAWTAMITGYT-SCNHHSRAWKVFPRM-LRDGVRPNAFTLSAVL 112
+ + +F +M D V W ++TG + SC + + F M D +P++ T + VL
Sbjct: 72 MDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRETM--RFFKAMHFADEPKPSSVTFAIVL 129
Query: 113 KACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKN 172
C L + G+ H +K G ++ V NAL+ MYA A F+ I K+
Sbjct: 130 PLCVRLGDSYNGKSMHSYIIKAGLEKDTL-VGNALVSMYAKFGFIFPDAYTAFDGIADKD 188
Query: 173 AVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGIL---GKQ 229
VSW +I G++ R F M+ E E + + + + CAS+ I G+Q
Sbjct: 189 VVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQ 248
Query: 230 LHAAVINHGF-QSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFET 286
+H+ V+ + Q+++ V NS++ Y R EA F M KD ++WN +IAG+ +
Sbjct: 249 IHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYAS 306
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 106/241 (43%), Gaps = 9/241 (3%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
L+ Y + GS +A LF EM+ D+ W+ M+ Y + A VF + G+RPN
Sbjct: 508 LLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPN 567
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
T+ +L C L +L HG ++ G I + L+D+YA C S+ A V
Sbjct: 568 TVTIMNLLPVCAQLASLHLVRQCHGYIIRGGL--GDIRLKGTLLDVYAK-CGSLKHAYSV 624
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA--VSACASVG 222
F+ ++ V +T ++ GY G L ++ M E + P I ++AC G
Sbjct: 625 FQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMT--ESNIKPDHVFITTMLTACCHAG 682
Query: 223 SGILGKQLHAAVIN-HGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM-TQKDTITWNTL 280
G Q++ ++ HG + + +D+ R +A F +M + + W TL
Sbjct: 683 LIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTL 742
Query: 281 I 281
+
Sbjct: 743 L 743
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 93/191 (48%), Gaps = 9/191 (4%)
Query: 111 VLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVT 170
V+KAC + L G HG K+G S V ++++MYA C MD + +F + +
Sbjct: 27 VVKACASVSDLTSGRALHGCVFKLGHIACS-EVSKSVLNMYAK-CRRMDDCQKMFRQMDS 84
Query: 171 KNAVSWTTLITGYTHRGDAFGGLRVFRQM-VLEEGELSPFSFSIAVSACASVGSGILGKQ 229
+ V W ++TG + +R F+ M +E + S +F+I + C +G GK
Sbjct: 85 LDPVVWNIVLTGLS-VSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKS 143
Query: 230 LHAAVINHGFQSNLPVMNSILDMYCRCR-CASEAKQFFCEMTQKDTITWNTLIAGFET-- 286
+H+ +I G + + V N+++ MY + +A F + KD ++WN +IAGF
Sbjct: 144 MHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENN 203
Query: 287 --LDSKESLCI 295
D+ S C+
Sbjct: 204 MMADAFRSFCL 214
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 134/317 (42%), Gaps = 47/317 (14%)
Query: 19 SVVLHHRTQLNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMIT 78
S +L H L D T + LI Y G A+ F M+ +D+++W A++
Sbjct: 354 SYILRHSYLLED--------TSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILD 405
Query: 79 GYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGA-- 136
+ + + +L + + ++ T+ ++LK C ++ + + HG +VK G
Sbjct: 406 AFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLH 465
Query: 137 RGSSIYVDNALMDMYATCCD-------------------------------SMDRARMVF 165
+ NAL+D YA C + S D A+M+F
Sbjct: 466 DEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLF 525
Query: 166 EDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA--VSACASVGS 223
++ T + +W+ ++ Y + VFR+ ++ + P + +I + CA + S
Sbjct: 526 TEMSTTDLTTWSLMVRIYAESCCPNEAIGVFRE--IQARGMRPNTVTIMNLLPVCAQLAS 583
Query: 224 GILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAG 283
L +Q H +I G ++ + ++LD+Y +C A F ++D + + ++AG
Sbjct: 584 LHLVRQCHGYIIRGGL-GDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAG 642
Query: 284 FETLD-SKESLCIFSLM 299
+ KE+L I+S M
Sbjct: 643 YAVHGRGKEALMIYSHM 659
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Query: 196 FRQMVLEEGELSPFS-----FSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSIL 250
RQ V LS F F V ACASV G+ LH V G + V S+L
Sbjct: 4 LRQFVQNFRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVL 63
Query: 251 DMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLDSKESLCIFSLM 299
+MY +CR + ++ F +M D + WN ++ G +E++ F M
Sbjct: 64 NMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAM 112
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 115/241 (47%), Gaps = 5/241 (2%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
++ Y G ++ A +F EM HRD V+W+ MI G + ++ F + R G+ PN
Sbjct: 209 MLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPN 268
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
+L+ VL AC + G++ HG K G + V+NAL+DMY+ C ++ AR+V
Sbjct: 269 EVSLTGVLSACSQSGSFEFGKILHGFVEKAG-YSWIVSVNNALIDMYSR-CGNVPMARLV 326
Query: 165 FEDIVTKNA-VSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGS 223
FE + K VSWT++I G G +R+F +M SF + AC+ G
Sbjct: 327 FEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGL 386
Query: 224 GILGKQLHAAVIN-HGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDT-ITWNTLI 281
G+ + + + + + ++D+Y R +A F C+M T I W TL+
Sbjct: 387 IEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLL 446
Query: 282 A 282
Sbjct: 447 G 447
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 116/279 (41%), Gaps = 64/279 (22%)
Query: 69 DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG-VRPNAFTLSAVLKACKGLRALFCGELA 127
D + ++ GY+ + + VF M+R G V P++F+ + V+KA + R+L G
Sbjct: 69 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQM 128
Query: 128 HGLAVKIGARGSSIYVDNALMDMYATCC---------DSMDR------------------ 160
H A+K G S ++V L+ MY C D M +
Sbjct: 129 HCQALKHGLE-SHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGND 187
Query: 161 ---ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQM------------------ 199
AR +F+ ++ +N SW ++ GY G+ R+F +M
Sbjct: 188 VAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHN 247
Query: 200 -----------VLEEGELSPFSFSI--AVSACASVGSGILGKQLHAAVINHGFQSNLPVM 246
L+ +SP S+ +SAC+ GS GK LH V G+ + V
Sbjct: 248 GSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVN 307
Query: 247 NSILDMYCRCRCASEAKQFFCEMTQKDTI-TWNTLIAGF 284
N+++DMY RC A+ F M +K I +W ++IAG
Sbjct: 308 NALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGL 346
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 7/194 (3%)
Query: 110 AVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIV 169
++L +CK LRAL HGL +K G S + ++ + D++ AR +
Sbjct: 10 SLLNSCKNLRAL---TQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFP 66
Query: 170 TKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAVSACASVGSGILG 227
+A + TL+ GY+ + + VF +M + +G + P FSF+ + A + S G
Sbjct: 67 EPDAFMFNTLVRGYSESDEPHNSVAVFVEM-MRKGFVFPDSFSFAFVIKAVENFRSLRTG 125
Query: 228 KQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLI-AGFET 286
Q+H + HG +S+L V +++ MY C C A++ F EM Q + + WN +I A F
Sbjct: 126 FQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRG 185
Query: 287 LDSKESLCIFSLMV 300
D + IF M+
Sbjct: 186 NDVAGAREIFDKML 199
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 117/231 (50%), Gaps = 3/231 (1%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
T ++ Y G ++ A +FDEM HR++ W+ MI GY N +A +F M R+GV
Sbjct: 187 TSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVV 246
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
N + +V+ +C L AL GE A+ VK ++ + AL+DM+ C D +++A
Sbjct: 247 ANETVMVSVISSCAHLGALEFGERAYEYVVK-SHMTVNLILGTALVDMFWRCGD-IEKAI 304
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVG 222
VFE + +++SW+++I G G A + F QM+ +F+ +SAC+ G
Sbjct: 305 HVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGG 364
Query: 223 SGILGKQLHAAV-INHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK 272
G +++ + +HG + L I+DM R +EA+ F +M K
Sbjct: 365 LVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVK 415
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 147/311 (47%), Gaps = 38/311 (12%)
Query: 25 RTQLNDSPFRPKDLTGLTTDLIKSYFDKGS--IQEAHTLFDEMTHRDVVAWTAMITGYTS 82
RT L F L L D S F+K + + A+ +F ++ + ++ + +I +++
Sbjct: 37 RTHLISDVFVASRLLALCVD--DSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIRCFST 94
Query: 83 CNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIY 142
S+A+ + +ML+ + P+ T ++KA + + GE H V+ G + + +Y
Sbjct: 95 GAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQ-NDVY 153
Query: 143 VDNALMDMYATC------------------------------CDSMDRARMVFEDIVTKN 172
V+N+L+ MYA C C ++ AR +F+++ +N
Sbjct: 154 VENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRN 213
Query: 173 AVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAV-SACASVGSGILGKQLH 231
+W+ +I GY + + F + + EG ++ + ++V S+CA +G+ G++ +
Sbjct: 214 LFTWSIMINGYA-KNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAY 272
Query: 232 AAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETL-DSK 290
V+ NL + +++DM+ RC +A F + + D+++W+++I G +
Sbjct: 273 EYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAH 332
Query: 291 ESLCIFSLMVS 301
+++ FS M+S
Sbjct: 333 KAMHYFSQMIS 343
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 85/184 (46%), Gaps = 16/184 (8%)
Query: 110 AVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDS---------MDR 160
A+L++C L ++ HG ++ S ++V + L+ A C D +
Sbjct: 17 ALLQSCSSFSDL---KIIHGFLLRTHLI-SDVFVASRLL---ALCVDDSTFNKPTNLLGY 69
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
A +F I N + LI ++ + + QM+ +F + A +
Sbjct: 70 AYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSE 129
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTL 280
+ ++G+Q H+ ++ GFQ+++ V NS++ MY C + A + F +M +D ++W ++
Sbjct: 130 MECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSM 189
Query: 281 IAGF 284
+AG+
Sbjct: 190 VAGY 193
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 123/260 (47%), Gaps = 7/260 (2%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
++I Y G + A +FD+M R+ V++ +I GY+ +AW VF M G
Sbjct: 53 NNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYL 112
Query: 103 PNAFTLSAVLK-ACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRA 161
PN T+S +L A +RA G HGL++K G + +V L+ +Y D ++ A
Sbjct: 113 PNQSTVSGLLSCASLDVRA---GTQLHGLSLKYGLFMADAFVGTCLLCLYGRL-DLLEMA 168
Query: 162 RMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASV 221
VFED+ K+ +W +++ HRG + FR++V L+ SF + + V
Sbjct: 169 EQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCV 228
Query: 222 GSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLI 281
+ KQLH + G + V+NS++ Y +C A++ F + D ++WN +I
Sbjct: 229 KDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAII 288
Query: 282 AGFETLDSKESLCIFSLMVS 301
T S+ L L VS
Sbjct: 289 CA--TAKSENPLKALKLFVS 306
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 128/285 (44%), Gaps = 39/285 (13%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ LI +Y G+ A +F + D+V+W A+I + +A K+F M G
Sbjct: 252 VVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHG 311
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
PN T +VL ++ L CG HG+ +K G + I + NAL+D YA C +++
Sbjct: 312 FSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCE-TGIVLGNALIDFYAK-CGNLED 369
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
+R+ F+ I KN V W L++GY ++ D L +F QM+ + ++FS A+ +C
Sbjct: 370 SRLCFDYIRDKNIVCWNALLSGYANK-DGPICLSLFLQMLQMGFRPTEYTFSTALKSCCV 428
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCAS-------------------- 260
+QLH+ ++ G++ N V++S++ Y + + +
Sbjct: 429 TEL----QQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNI 484
Query: 261 ------------EAKQFFCEMTQKDTITWNTLIAGFETLDSKESL 293
E+ + + Q DT++WN IA D E +
Sbjct: 485 VAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEV 529
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 100/236 (42%), Gaps = 2/236 (0%)
Query: 49 YFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTL 108
Y +G E+ L + D V+W I + ++H ++F ML+ +RP+ +T
Sbjct: 489 YSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTF 548
Query: 109 SAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDI 168
++L C L L G HGL K + +V N L+DMY C S+ VFE+
Sbjct: 549 VSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGK-CGSIRSVMKVFEET 607
Query: 169 VTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGK 228
KN ++WT LI+ G L F++ + + SF ++AC G G
Sbjct: 608 REKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGM 667
Query: 229 QLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT-QKDTITWNTLIAG 283
L + ++G + + +D+ R EA+ EM D W T + G
Sbjct: 668 GLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDG 723
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 111/250 (44%), Gaps = 10/250 (4%)
Query: 55 IQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKA 114
++ A +F++M + + W M++ F ++R G + VLK
Sbjct: 165 LEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKG 224
Query: 115 CKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAV 174
++ L + H A K G I V N+L+ Y C ++ RM F+D + + V
Sbjct: 225 VSCVKDLDISKQLHCSATKKGL-DCEISVVNSLISAYGKCGNTHMAERM-FQDAGSWDIV 282
Query: 175 SWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP----FSFSIAVSACASVGSGILGKQL 230
SW +I + L++F M E SP + + VS+ + S G+Q+
Sbjct: 283 SWNAIICATAKSENPLKALKLFVSM--PEHGFSPNQGTYVSVLGVSSLVQLLS--CGRQI 338
Query: 231 HAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLDSK 290
H +I +G ++ + + N+++D Y +C +++ F + K+ + WN L++G+ D
Sbjct: 339 HGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGP 398
Query: 291 ESLCIFSLMV 300
L +F M+
Sbjct: 399 ICLSLFLQML 408
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 121/271 (44%), Gaps = 37/271 (13%)
Query: 56 QEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKAC 115
EA ++ + + W +I Y + RM+ G+RP+AFT +VLKAC
Sbjct: 95 NEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKAC 154
Query: 116 KGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVS 175
+ G + HG ++++ + SS+YV NAL+ MY +M AR +F+ + ++AVS
Sbjct: 155 GETLDVAFGRVVHG-SIEVSSYKSSLYVCNALISMYKR-FRNMGIARRLFDRMFERDAVS 212
Query: 176 WTTLITGYTHRG---DAF--------------------------------GGLRVFRQMV 200
W +I Y G +AF G L + +M
Sbjct: 213 WNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMR 272
Query: 201 LEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCAS 260
L P + I + AC+ +G+ LGK++H I+ + V N+++ MY +C+
Sbjct: 273 NFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLR 332
Query: 261 EAKQFFCEMTQKDTITWNTLIAGFETLDSKE 291
A F + + TWN++I+G+ L+ E
Sbjct: 333 HALIVFRQTEENSLCTWNSIISGYAQLNKSE 363
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 116/263 (44%), Gaps = 38/263 (14%)
Query: 58 AHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAV------ 111
A LFD M RD V+W A+I Y S S A+++F +M GV + T + +
Sbjct: 198 ARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQ 257
Query: 112 -----------------------------LKACKGLRALFCGELAHGLAVKIGARGSSIY 142
LKAC + A+ G+ HGLA+ G
Sbjct: 258 TGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGID-N 316
Query: 143 VDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLE 202
V N L+ MY+ C D + A +VF + +W ++I+GY + + R+M++
Sbjct: 317 VRNTLITMYSKCKD-LRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVA 375
Query: 203 EGELSPFSFSIAVSACASVGSGILGKQLHAAVINHG-FQSNLPVMNSILDMYCRCRCASE 261
+ + + + + CA + + GK+ H ++ F+ + NS++D+Y +
Sbjct: 376 GFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVA 435
Query: 262 AKQFFCEMTQKDTITWNTLIAGF 284
AKQ M+++D +T+ +LI G+
Sbjct: 436 AKQVSDLMSKRDEVTYTSLIDGY 458
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 112/239 (46%), Gaps = 3/239 (1%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
LI Y ++ A +F + + W ++I+GY N A + ML G +PN
Sbjct: 321 LITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPN 380
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
+ TL+++L C + L G+ H ++ + N+L+D+YA + A+ V
Sbjct: 381 SITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAK-SGKIVAAKQV 439
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
+ + ++ V++T+LI GY ++G+ L +F++M + + +SAC+
Sbjct: 440 SDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLV 499
Query: 225 ILGKQLHAAV-INHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDT-ITWNTLI 281
G++L + +G + L + ++D+Y R ++AK M K + TW TL+
Sbjct: 500 HEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLL 558
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 2/173 (1%)
Query: 109 SAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDI 168
+++L AC +RA G H + G S+ V L+ Y + + + A+ + E+
Sbjct: 47 ASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPK-LVTFY-SAFNLHNEAQSIIENS 104
Query: 169 VTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGK 228
+ + W LI Y + +++MV + F++ + AC G+
Sbjct: 105 DILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGR 164
Query: 229 QLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLI 281
+H ++ ++S+L V N+++ MY R R A++ F M ++D ++WN +I
Sbjct: 165 VVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVI 217
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 5/190 (2%)
Query: 36 KDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPR 95
KD T L L+ Y G I A + D M+ RD V +T++I GY + A +F
Sbjct: 414 KDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKE 473
Query: 96 MLRDGVRPNAFTLSAVLKACKGLRALFCGE-LAHGLAVKIGARGSSIYVDNALMDMYATC 154
M R G++P+ T+ AVL AC + + GE L + + G R + + ++D+Y
Sbjct: 474 MTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHF-SCMVDLYGR- 531
Query: 155 CDSMDRARMVFEDIVTK-NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSI 213
+ +A+ + ++ K + +W TL+ G+ G + + +LE +P + +
Sbjct: 532 AGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIG-KWAAEKLLEMKPENPGYYVL 590
Query: 214 AVSACASVGS 223
+ A+ GS
Sbjct: 591 IANMYAAAGS 600
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 146/323 (45%), Gaps = 66/323 (20%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG-V 101
+ ++ Y G I +A +LFD MT R+V+ WTAMI GY + +F RM ++G V
Sbjct: 212 SSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDV 271
Query: 102 RPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRA 161
+ N+ TL+ + KAC+ G HGL ++ +++ N+LM MY+ M A
Sbjct: 272 KVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLE-FDLFLGNSLMSMYSK-LGYMGEA 329
Query: 162 RMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEE--------------GELS 207
+ VF + K++VSW +LITG R +F +M ++ GE+S
Sbjct: 330 KAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEIS 389
Query: 208 P-------------FSFSIAVSACASVG------------------------SGILGKQL 230
+++ +SA S G S +L
Sbjct: 390 KCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATA 449
Query: 231 HAAVINHGFQ-----------SNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNT 279
A + G Q ++L V NS++ MYC+C ++A + F +++ + +++NT
Sbjct: 450 SLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNT 509
Query: 280 LIAGFETLD-SKESLCIFSLMVS 301
+I+G+ K++L +FS++ S
Sbjct: 510 MISGYSYNGFGKKALKLFSMLES 532
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 98/185 (52%), Gaps = 2/185 (1%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
TD+IK + KG I + LF M +D + WTAMI+ + S ++ A F +ML+ V
Sbjct: 376 TDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVC 435
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
PN++T S+VL A L L G HG VK+ + + V N+L+ MY C ++ D A
Sbjct: 436 PNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIV-NDLSVQNSLVSMYCKCGNTND-AY 493
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVG 222
+F I N VS+ T+I+GY++ G L++F + E + +F +SAC VG
Sbjct: 494 KIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVG 553
Query: 223 SGILG 227
LG
Sbjct: 554 YVDLG 558
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 121/299 (40%), Gaps = 64/299 (21%)
Query: 46 IKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRM-LRDGVRPN 104
I + G++QEA +F +M++R +V+W AMI+ Y S+AW+VF M +R N
Sbjct: 57 ISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYN 116
Query: 105 AFTLSAVLKACKGLRA--LFCG----------------------ELAHGLAVKIGARGSS 140
A + + C +A LFC + A L + +
Sbjct: 117 AMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRD 176
Query: 141 IYVDNALMDMY--------------------ATCCDSMDR----------ARMVFEDIVT 170
N L+ Y C SM AR +F+ +
Sbjct: 177 SVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTE 236
Query: 171 KNAVSWTTLITGYTHRG---DAFGGLRVFRQMVLEEGELSPFSFSIAV--SACASVGSGI 225
+N ++WT +I GY G D FG RQ EG++ S ++AV AC
Sbjct: 237 RNVITWTAMIDGYFKAGFFEDGFGLFLRMRQ----EGDVKVNSNTLAVMFKACRDFVRYR 292
Query: 226 LGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
G Q+H V + +L + NS++ MY + EAK F M KD+++WN+LI G
Sbjct: 293 EGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGL 351
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 114/252 (45%), Gaps = 4/252 (1%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
+ I Y G + A +FDE R + +W A+I G + A ++F M R G+
Sbjct: 156 SGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLE 215
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGA-RGSSIYVDNALMDMYATCCDSMDRA 161
P+ FT+ +V +C GL L H ++ S I + N+L+DMY C MD A
Sbjct: 216 PDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGK-CGRMDLA 274
Query: 162 RMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASV 221
+FE++ +N VSW+++I GY G+ L FRQM + +F +SAC
Sbjct: 275 SHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHG 334
Query: 222 GSGILGKQLHAAVINH-GFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK-DTITWNT 279
G GK A + + + L I+D+ R EAK+ EM K + + W
Sbjct: 335 GLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGC 394
Query: 280 LIAGFETLDSKE 291
L+ G E E
Sbjct: 395 LMGGCEKFGDVE 406
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 120/262 (45%), Gaps = 12/262 (4%)
Query: 31 SPFRPKDLTGLTTDLIKSYFDKGSIQEAH------TLFDEMTHRDVVAWTAMITGYTSCN 84
+P P+D L L+ + ++ H + D+ + W ++ Y
Sbjct: 39 TPLSPQDRNKLLATLLSNCTSLARVRRIHGDIFRSRILDQ--YPIAFLWNNIMRSYIRHE 96
Query: 85 HHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVD 144
A +V+ M+R V P+ ++L V+KA + G+ H +AV++G G + +
Sbjct: 97 SPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDE-FCE 155
Query: 145 NALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEG 204
+ + +Y + + AR VF++ + SW +I G H G A + +F M
Sbjct: 156 SGFITLYCKAGE-FENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGL 214
Query: 205 ELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQ--SNLPVMNSILDMYCRCRCASEA 262
E F+ ++C +G L QLH V+ + S++ ++NS++DMY +C A
Sbjct: 215 EPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLA 274
Query: 263 KQFFCEMTQKDTITWNTLIAGF 284
F EM Q++ ++W+++I G+
Sbjct: 275 SHIFEEMRQRNVVSWSSMIVGY 296
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 85/203 (41%), Gaps = 27/203 (13%)
Query: 24 HRTQLNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSC 83
H+ L D+ L + LI Y G + A +F+EM R+VV+W++MI GY +
Sbjct: 241 HKCVLQAKTEEKSDIMMLNS-LIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAAN 299
Query: 84 NHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIG----ARGS 139
+ A + F +M GVRPN T VL AC HG V+ G A
Sbjct: 300 GNTLEALECFRQMREFGVRPNKITFVGVLSAC-----------VHGGLVEEGKTYFAMMK 348
Query: 140 SIYVDNALMDMYATCCDSMDR------ARMVFEDIVTK-NAVSWTTLITGYTHRGDAFGG 192
S + + Y D + R A+ V E++ K N + W L+ G GD
Sbjct: 349 SEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMA 408
Query: 193 LRVFRQMVLEEGELSPFSFSIAV 215
V MV EL P++ + V
Sbjct: 409 EWVAPYMV----ELEPWNDGVYV 427
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 107/231 (46%), Gaps = 9/231 (3%)
Query: 39 TGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLR 98
T L+ L++ Y S+++AH +FDEM DV++W ++++GY +F + R
Sbjct: 90 TRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHR 149
Query: 99 DGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSM 158
V PN F+ +A L AC L G H VK+G ++ V N L+DMY C M
Sbjct: 150 SDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGK-CGFM 208
Query: 159 DRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSAC 218
D A +VF+ + K+ VSW ++ + G GL F QM +P + +
Sbjct: 209 DDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMP------NPDTVTYNELID 262
Query: 219 ASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM 269
A V SG V++ N N+IL Y + EA +FF +M
Sbjct: 263 AFVKSGDFNNAFQ--VLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKM 311
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 101/189 (53%), Gaps = 3/189 (1%)
Query: 95 RMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATC 154
++ DG +P+A L +L+ + HG K G S+ + N+LM Y T
Sbjct: 45 ELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFV-SNTRLSNSLMRFYKTS 103
Query: 155 CDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA 214
DS++ A VF+++ + +SW +L++GY G G+ +F ++ + + FSF+ A
Sbjct: 104 -DSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAA 162
Query: 215 VSACASVGSGILGKQLHAAVINHGFQS-NLPVMNSILDMYCRCRCASEAKQFFCEMTQKD 273
++ACA + LG +H+ ++ G + N+ V N ++DMY +C +A F M +KD
Sbjct: 163 LAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKD 222
Query: 274 TITWNTLIA 282
T++WN ++A
Sbjct: 223 TVSWNAIVA 231
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 94/187 (50%), Gaps = 5/187 (2%)
Query: 35 PKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFP 94
P T +LI ++ G A + +M + + +W ++TGY + A + F
Sbjct: 250 PNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFT 309
Query: 95 RMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATC 154
+M GVR + ++LS VL A L + G L H A K+G S + V +AL+DMY+
Sbjct: 310 KMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGL-DSRVVVASALIDMYSK- 367
Query: 155 CDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFS 212
C + A ++F + KN + W +I+GY GD+ +++F Q+ +E L P F+F
Sbjct: 368 CGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLK-QERFLKPDRFTFL 426
Query: 213 IAVSACA 219
++ C+
Sbjct: 427 NLLAVCS 433
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 101/232 (43%), Gaps = 11/232 (4%)
Query: 69 DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAH 128
+VV +I Y C A VF M + + +A++ +C G+L
Sbjct: 191 NVVVGNCLIDMYGKCGFMDDAVLVFQHM----EEKDTVSWNAIVASCSR-----NGKLEL 241
Query: 129 GLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGD 188
GL N L+D + D + A V D+ N+ SW T++TGY +
Sbjct: 242 GLWFFHQMPNPDTVTYNELIDAFVKSGD-FNNAFQVLSDMPNPNSSSWNTILTGYVNSEK 300
Query: 189 AFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNS 248
+ F +M +S SI ++A A++ G +HA G S + V ++
Sbjct: 301 SGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASA 360
Query: 249 ILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF-ETLDSKESLCIFSLM 299
++DMY +C A+ F M +K+ I WN +I+G+ DS E++ +F+ +
Sbjct: 361 LIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQL 412
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 12/133 (9%)
Query: 170 TKNAVSWTTLITGYTHRGDAFGGLRVFRQMV--LEEGE---LSPFSFSIAVSACASVGSG 224
T ++ SW+T++ FG + V R V + +GE SP + VS + G
Sbjct: 18 TASSNSWSTIVPALAR----FGSIGVLRAAVELINDGEKPDASPLVHLLRVSG--NYGYV 71
Query: 225 ILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
L +QLH V HGF SN + NS++ Y +A + F EM D I+WN+L++G+
Sbjct: 72 SLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGY 131
Query: 285 -ETLDSKESLCIF 296
++ +E +C+F
Sbjct: 132 VQSGRFQEGICLF 144
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 134/307 (43%), Gaps = 43/307 (14%)
Query: 18 PSVVLHHRTQLNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDE--MTHRDVVAWTA 75
P LH L S + + L+ L + Y G + A LFDE ++ +D V WT
Sbjct: 24 PGKELH--AVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTT 81
Query: 76 MITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIG 135
+++ ++ + K+F M R V + ++ + C L L + HG+AVK+G
Sbjct: 82 LLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMG 141
Query: 136 ARGSSIYVDNALMDMYATC------------------------------CDSMDRARMVF 165
+S+ V NALMDMY C + ++R R VF
Sbjct: 142 VL-TSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVF 200
Query: 166 EDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGE-LSPFSFSIAVSACASVGSG 224
++ +NAV+WT ++ GY G L + +MV G L+ + +SACA G+
Sbjct: 201 HEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNL 260
Query: 225 ILGKQLHAAVINHGFQ-------SNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITW 277
++G+ +H + ++ V +++DMY +C + F M +++ +TW
Sbjct: 261 VVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTW 320
Query: 278 NTLIAGF 284
N L +G
Sbjct: 321 NALFSGL 327
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 9/222 (4%)
Query: 55 IQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRML-RDGVRPNAFTLSAVLK 113
++ +F EM R+ VAWT M+ GY ++ M+ R G N TL ++L
Sbjct: 193 LERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLS 252
Query: 114 ACKGLRALFCGELAHGLAVK----IGARGS--SIYVDNALMDMYATCCDSMDRARMVFED 167
AC L G H A+K +G S + V AL+DMYA C ++D + VF
Sbjct: 253 ACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKC-GNIDSSMNVFRL 311
Query: 168 IVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILG 227
+ +N V+W L +G G + +F QM+ E + +F+ +SAC+ G G
Sbjct: 312 MRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMI-REVKPDDLTFTAVLSACSHSGIVDEG 370
Query: 228 KQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM 269
+ ++ +G + + ++D+ R EA+ EM
Sbjct: 371 WRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREM 412
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 127/251 (50%), Gaps = 7/251 (2%)
Query: 35 PKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFP 94
P DL I G++ AH FDEM+ RDVV + +I+G + RA +++
Sbjct: 42 PSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYA 101
Query: 95 RMLRDGVRPNAFTLSAVLKACKGLRALFCGE--LAHGLAVKIGARGSSIYVDNALMDMYA 152
M+ G+R +A T +VL C LFC E H + +G G +++V +AL+ +YA
Sbjct: 102 EMVSCGLRESASTFPSVLSVCSD--ELFCREGIQVHCRVISLGF-GCNMFVRSALVGLYA 158
Query: 153 TCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFS 212
C +D A +F++++ +N L+ + G++ V+ +M LE + ++
Sbjct: 159 -CLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYC 217
Query: 213 IAVSACASVGSGILGKQLHAAVINHGFQ-SNLPVMNSILDMYCRCRCASEAKQFFCEMTQ 271
+ C+ GKQLH+ V+ G+ SN+ V N ++D Y C S + + F + +
Sbjct: 218 YMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPE 277
Query: 272 KDTITWNTLIA 282
KD I+WN++++
Sbjct: 278 KDVISWNSIVS 288
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 2/203 (0%)
Query: 55 IQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKA 114
+ A LFDEM R++ ++ + R ++V+ RM +GV N T +++
Sbjct: 163 VDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRG 222
Query: 115 CKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAV 174
C R ++ G+ H L VK G S+I+V N L+D Y+ C D R F + K+ +
Sbjct: 223 CSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRS-FNAVPEKDVI 281
Query: 175 SWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAV 234
SW ++++ G L +F +M S F ++ C+ GKQ+H V
Sbjct: 282 SWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYV 341
Query: 235 INHGFQ-SNLPVMNSILDMYCRC 256
+ GF S+L V ++++DMY +C
Sbjct: 342 LKMGFDVSSLHVQSALIDMYGKC 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 107/243 (44%), Gaps = 10/243 (4%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
LI Y I+ + L+ + ++ +++T C ++F M+ +G +
Sbjct: 357 LIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGID 416
Query: 105 AFTLSAVLKACKGL--RALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
TLS VLKA +L L H A+K G + + V +L+D Y T + +R
Sbjct: 417 EVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGY-AADVAVSCSLIDAY-TKSGQNEVSR 474
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSI--AVSACAS 220
VF+++ T N T++I GY G +++ R+M + L P +I +S C+
Sbjct: 475 KVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREM--DRMNLIPDEVTILSVLSGCSH 532
Query: 221 VGSGILGKQLHAAVIN-HGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT-QKDTITWN 278
G G+ + ++ + +G + ++D+ R +A++ + D + W+
Sbjct: 533 SGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWS 592
Query: 279 TLI 281
+L+
Sbjct: 593 SLL 595
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 128/276 (46%), Gaps = 52/276 (18%)
Query: 58 AHTLFDEMTHRDVVAWTAMITGYTSCNHHSR--AWKVFPRMLRDG-VRPNAFTLSAVLKA 114
AH +F++M R+ +W +I G++ + A +F M+ D V PN FT +VLKA
Sbjct: 78 AHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKA 137
Query: 115 CKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATC-------------------- 154
C + G+ HGLA+K G G + N L+ MY C
Sbjct: 138 CAKTGKIQEGKQIHGLALKYGFGGDEFVMSN-LVRMYVMCGFMKDARVLFYKNIIEKDMV 196
Query: 155 --CDSMDR----------------------ARMVFEDIVTKNAVSWTTLITGYTHRGDAF 190
D R ARM+F+ + ++ VSW T+I+GY+ G
Sbjct: 197 VMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFK 256
Query: 191 GGLRVFRQMVLEEGELSPFSFSIA--VSACASVGSGILGKQLHAAVINHGFQSNLPVMNS 248
+ VFR+M ++G++ P ++ + A + +GS LG+ LH + G + + + ++
Sbjct: 257 DAVEVFREM--KKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSA 314
Query: 249 ILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
++DMY +C +A F + +++ ITW+ +I GF
Sbjct: 315 LIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGF 350
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 118/240 (49%), Gaps = 4/240 (1%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
+I Y G + A LFD+M R VV+W MI+GY+ A +VF M + +RPN
Sbjct: 214 MIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPN 273
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
TL +VL A L +L GE H A G R + + +AL+DMY+ C +++A V
Sbjct: 274 YVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDV-LGSALIDMYSK-CGIIEKAIHV 331
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
FE + +N ++W+ +I G+ G A + F +M S ++ ++AC+ G
Sbjct: 332 FERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLV 391
Query: 225 ILGKQLHAAVIN-HGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK-DTITWNTLIA 282
G++ + +++ G + + ++D+ R EA++F M K D + W L+
Sbjct: 392 EEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLG 451
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 18/160 (11%)
Query: 158 MDRARMVFEDIVTKNAVSWTTLITGYTHRGD--AFGGLRVFRQMVLEE-GELSPFSFSIA 214
+D A +F + +N SW T+I G++ + A + +F +M+ +E E + F+F
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 215 VSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAK-QFFCEMTQKD 273
+ ACA G GKQ+H + +GF + VM++++ MY C +A+ F+ + +KD
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 274 TIT-------------WNTLIAGFETL-DSKESLCIFSLM 299
+ WN +I G+ L D K + +F M
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKM 234
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 114/235 (48%), Gaps = 8/235 (3%)
Query: 54 SIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLK 113
+ A LFD T +DVV W AMI+GY +C + A +F M G P+ T+ ++L
Sbjct: 224 EMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLS 283
Query: 114 ACKGLRALFCGELAHGLAVKIGARGSSIYVD----NALMDMYATCCDSMDRARMVFEDIV 169
AC L L G+ H ++ + SSIYV NAL+DMYA C S+DRA VF +
Sbjct: 284 ACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAK-CGSIDRAIEVFRGVK 342
Query: 170 TKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQ 229
++ +W TLI G A G + +F +M + + +F + AC+ G G++
Sbjct: 343 DRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRK 401
Query: 230 LHAAVIN-HGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT-QKDTITWNTLIA 282
+ + + + + N+ ++DM R EA F M + + I W TL+
Sbjct: 402 YFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLG 456
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 131/314 (41%), Gaps = 69/314 (21%)
Query: 53 GSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVL 112
G+++ AH LFDE+ DV ++ G + ++ M + GV P+ +T + VL
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 113 KAC---------------------------KGLRALF---CGEL------------AHGL 130
KAC K LF CG+L AH +
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV 179
Query: 131 A--------VKIGARGSSI-------YVDNALMDMYATCC---DSMDRARMVFEDIVTKN 172
A K G ++ Y D ++ T C MD AR +F+ K+
Sbjct: 180 AWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKD 239
Query: 173 AVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA--VSACASVGSGILGKQL 230
V+W +I+GY + G L +F++M + GE P +I +SACA +G GK+L
Sbjct: 240 VVTWNAMISGYVNCGYPKEALGIFKEM-RDAGE-HPDVVTILSLLSACAVLGDLETGKRL 297
Query: 231 H-----AAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFE 285
H A ++ P+ N+++DMY +C A + F + +D TWNTLI G
Sbjct: 298 HIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLA 357
Query: 286 TLDSKESLCIFSLM 299
++ S+ +F M
Sbjct: 358 LHHAEGSIEMFEEM 371
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 128/272 (47%), Gaps = 34/272 (12%)
Query: 36 KDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVF-- 93
KDL + ++ +Y G I +A LFDEM R+V++W+ +I GY C + A +F
Sbjct: 126 KDLPAWNS-VVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFRE 184
Query: 94 ---PRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDM 150
P+ VRPN FT+S VL AC L AL G+ H K I + AL+DM
Sbjct: 185 MQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVE-IDIVLGTALIDM 243
Query: 151 YATCCDSMDRARMVFEDIVTKNAV-SWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPF 209
YA C S++RA+ VF + +K V +++ +I G ++F +M + ++P
Sbjct: 244 YAK-CGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDN-INPN 301
Query: 210 SFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVM-------------NSILDMYCRC 256
S + GILG +H +IN G +S +M ++D+Y R
Sbjct: 302 SVTFV---------GILGACVHRGLINEG-KSYFKMMIEEFGITPSIQHYGCMVDLYGRS 351
Query: 257 RCASEAKQFFCEMT-QKDTITWNTLIAGFETL 287
EA+ F M + D + W +L++G L
Sbjct: 352 GLIKEAESFIASMPMEPDVLIWGSLLSGSRML 383
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 139/291 (47%), Gaps = 37/291 (12%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
T I S G I A +FD M D VAW M+T Y+ H A +F ++ +
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
P+ ++ +A+L C L + G L ++ G +S+ V+N+L+DMY C D++ A
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGF-CASLPVNNSLIDMYGKCSDTLS-AN 125
Query: 163 MVFEDIV--TKNAVSWTTL-------------------------------ITGYTHRGDA 189
VF D+ ++N V+W +L I+G+ H G
Sbjct: 126 KVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKL 185
Query: 190 FGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGIL-GKQLHAAVINHGFQSNLPVMNS 248
L +F++M+ E + ++FS ++AC++ S ++ G+ +HA ++ +G+ S + NS
Sbjct: 186 ESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNS 245
Query: 249 ILDMYCRCRCASEAKQFFCEMTQKDTITWNTLI-AGFETLDSKESLCIFSL 298
+L Y + +A + + ++WN++I A + +++++L +F L
Sbjct: 246 VLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHL 296
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 119/249 (47%), Gaps = 10/249 (4%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
+I + G ++A +F +++V WT MITGY +A + F M++ GV +
Sbjct: 277 IIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSD 336
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
F AVL AC GL L G++ HG + G +G + YV NAL+++YA C D + A
Sbjct: 337 HFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYA-YVGNALVNLYAKCGD-IKEADRA 394
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
F DI K+ VSW T++ + G A L+++ M+ + +F ++ C+ G
Sbjct: 395 FGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLV 454
Query: 225 ILGKQLHAAVINHGFQSNLPV--MNSILDMYCRCRCASEAKQFFCEMT-----QKDTITW 277
G + +++ ++ L V + ++DM+ R +EAK + + +W
Sbjct: 455 EEGCMIFESMVKD-YRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSW 513
Query: 278 NTLIAGFET 286
TL+ T
Sbjct: 514 ETLLGACST 522
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 120/250 (48%), Gaps = 20/250 (8%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRM--LR 98
++T ++ Y G + A FDEM HR V+WTA+I+GY C A K+F +M ++
Sbjct: 115 VSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVK 174
Query: 99 DGVRPNAFTLSAVLKA--CKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCD 156
D V NA + +K+ R LF E+ H ++ ++ Y D
Sbjct: 175 DVVIYNAM-MDGFVKSGDMTSARRLF-DEMTH----------KTVITWTTMIHGYCNIKD 222
Query: 157 SMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSI--A 214
+D AR +F+ + +N VSW T+I GY G+R+F++M L P +I
Sbjct: 223 -IDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTS-LDPDDVTILSV 280
Query: 215 VSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDT 274
+ A + G+ LG+ H V + V +ILDMY +C +AK+ F EM +K
Sbjct: 281 LPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQV 340
Query: 275 ITWNTLIAGF 284
+WN +I G+
Sbjct: 341 ASWNAMIHGY 350
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 4/228 (1%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRM-LRDGV 101
T +I Y + I A LFD M R++V+W MI GY ++F M +
Sbjct: 211 TTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSL 270
Query: 102 RPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRA 161
P+ T+ +VL A AL GE H V+ + V A++DMY+ C + +++A
Sbjct: 271 DPDDVTILSVLPAISDTGALSLGEWCHCF-VQRKKLDKKVKVCTAILDMYSKCGE-IEKA 328
Query: 162 RMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASV 221
+ +F+++ K SW +I GY G+A L +F M++EE + + ++AC
Sbjct: 329 KRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHG 387
Query: 222 GSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM 269
G G++ + G + + ++D+ R EA+ M
Sbjct: 388 GLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNM 435
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 115/250 (46%), Gaps = 44/250 (17%)
Query: 53 GSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVL 112
G +++A LFDEM RD+++W M+ GY C S+A+++F +M P T+S
Sbjct: 199 GELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKM------PERNTVSW-- 250
Query: 113 KACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFED--IVT 170
+ M M + M+ AR++F+ +
Sbjct: 251 ---------------------------------STMVMGYSKAGDMEMARVMFDKMPLPA 277
Query: 171 KNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQL 230
KN V+WT +I GY +G R+ QMV + + ++AC G LG ++
Sbjct: 278 KNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRI 337
Query: 231 HAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLD-S 289
H+ + SN V+N++LDMY +C +A F ++ +KD ++WNT++ G
Sbjct: 338 HSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHG 397
Query: 290 KESLCIFSLM 299
KE++ +FS M
Sbjct: 398 KEAIELFSRM 407
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 41/225 (18%)
Query: 61 LFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRA 120
+F+++ +V ++I + + +A+ VF M R G+ + FT +LKAC G
Sbjct: 73 VFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSW 132
Query: 121 LFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARM-VFEDIVTKNAVSWTTL 179
L ++ H K+G S IYV NAL+D Y+ C R M +FE + ++ VSW ++
Sbjct: 133 LPVVKMMHNHIEKLGL-SSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSM 191
Query: 180 ITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGF 239
+ G G+ R+F +M
Sbjct: 192 LGGLVKAGELRDARRLFDEMP--------------------------------------- 212
Query: 240 QSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
Q +L N++LD Y RCR S+A + F +M +++T++W+T++ G+
Sbjct: 213 QRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGY 257
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 93/190 (48%), Gaps = 4/190 (2%)
Query: 35 PKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMT--HRDVVAWTAMITGYTSCNHHSRAWKV 92
P+ T + ++ Y G ++ A +FD+M ++VV WT +I GY A ++
Sbjct: 243 PERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRL 302
Query: 93 FPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYA 152
+M+ G++ +A + ++L AC L G H + +K GS+ YV NAL+DMYA
Sbjct: 303 VDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSI-LKRSNLGSNAYVLNALLDMYA 361
Query: 153 TCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFS 212
C + + +A VF DI K+ VSW T++ G G + +F +M E +F
Sbjct: 362 KCGN-LKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFI 420
Query: 213 IAVSACASVG 222
+ +C G
Sbjct: 421 AVLCSCNHAG 430
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 61/134 (45%), Gaps = 2/134 (1%)
Query: 153 TCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFS 212
+ C + A VF + N +LI + + VF +M F++
Sbjct: 62 SLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYP 121
Query: 213 IAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRC--RCASEAKQFFCEMT 270
+ AC+ + K +H + G S++ V N+++D Y RC +A + F +M+
Sbjct: 122 FLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMS 181
Query: 271 QKDTITWNTLIAGF 284
++DT++WN+++ G
Sbjct: 182 ERDTVSWNSMLGGL 195
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 125/263 (47%), Gaps = 20/263 (7%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
T L+ Y + +A + DEM R + + A ++G A+++F G
Sbjct: 70 TALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSG 129
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
N+ T+++VL C + G H LA+K G +YV +L+ MY+ C + + AR
Sbjct: 130 MNSVTVASVLGGCGDIEG---GMQLHCLAMKSGFE-MEVYVGTSLVSMYSRCGEWVLAAR 185
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQM-VLEEGELSPFSFSIAVSACASV 221
M FE + K+ V++ I+G G VF M E + +F A++ACAS+
Sbjct: 186 M-FEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASL 244
Query: 222 GSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQ-KDTITWNTL 280
+ G+QLH V+ FQ V +++DMY +CRC A F E+ ++ I+WN++
Sbjct: 245 LNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSV 304
Query: 281 IAG-------------FETLDSK 290
I+G FE LDS+
Sbjct: 305 ISGMMINGQHETAVELFEKLDSE 327
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 129/297 (43%), Gaps = 42/297 (14%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLR-DGV 101
T L+ Y G A +F+++ H+ VV + A I+G + VF M +
Sbjct: 168 TSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSE 227
Query: 102 RPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRA 161
PN T + AC L L G HGL +K + ++ V AL+DMY+ C A
Sbjct: 228 EPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETM-VGTALIDMYSKC-RCWKSA 285
Query: 162 RMVFEDIV-TKNAVSWTT-----------------------------------LITGYTH 185
+VF ++ T+N +SW + LI+G++
Sbjct: 286 YIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQ 345
Query: 186 RGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPV 245
G + F +M+ S + +SAC+ + + GK++H VI + ++ V
Sbjct: 346 LGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFV 405
Query: 246 MNSILDMYCRCRCASEAKQFF--CEMTQKDTITWNTLIAGFETLDSKES-LCIFSLM 299
+ S++DMY +C +S A++ F E KD + WN +I+G+ ES + IF L+
Sbjct: 406 LTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELL 462
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 112/232 (48%), Gaps = 9/232 (3%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+I G + A LF+++ D W ++I+G++ A+K F RML
Sbjct: 304 VISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVV 363
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
+ P+ L+++L AC + L G+ HG +K A I+V +L+DMY C S
Sbjct: 364 MVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAE-RDIFVLTSLIDMYMKCGLS-SW 421
Query: 161 ARMVFE--DIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSAC 218
AR +F+ + K+ V W +I+GY G+ + +F + E+ E S +F+ +SAC
Sbjct: 422 ARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSAC 481
Query: 219 ASVGSGILGKQLHAAVI-NHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM 269
+ G+ G Q+ + +G++ + + ++D+ R EAK+ +M
Sbjct: 482 SHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 78/182 (42%), Gaps = 5/182 (2%)
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
PN FT +LK+C L + G + H VK G ++ AL+ MY D A
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFF-VDVFTATALVSMYMKVKQVTD-AL 86
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVG 222
V +++ + S ++G G R+F + ++ + + + C +
Sbjct: 87 KVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIE 146
Query: 223 SGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIA 282
G+ QLH + GF+ + V S++ MY RC A + F ++ K +T+N I+
Sbjct: 147 GGM---QLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFIS 203
Query: 283 GF 284
G
Sbjct: 204 GL 205
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 126/270 (46%), Gaps = 17/270 (6%)
Query: 21 VLHHRTQLNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGY 80
+L R+ + P R D+ T +++ Y + G ++ +FD+M R+V +W +I GY
Sbjct: 106 MLEARSLFDQMPCR--DVMSWNT-VLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGY 162
Query: 81 TSCNHHSRAWKVFPRMLRDG-VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGS 139
S F RM+ +G V PN T++ VL AC L A G+ H +G
Sbjct: 163 AQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKV 222
Query: 140 SIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQM 199
+ V NAL+DMY C +++ A VF+ I ++ +SW T+I G G L +F +M
Sbjct: 223 DVNVKNALIDMYGK-CGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEM 281
Query: 200 VLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSI------LDMY 253
+ +SP + CA G++ L A N F ++ +M I +D+
Sbjct: 282 --KNSGISPDKVTFVGVLCACKHMGLVEDGL--AYFNSMF-TDFSIMPEIEHCGCVVDLL 336
Query: 254 CRCRCASEAKQFFCEMTQK-DTITWNTLIA 282
R ++A +F +M K D + W TL+
Sbjct: 337 SRAGFLTQAVEFINKMPVKADAVIWATLLG 366
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 116/238 (48%), Gaps = 20/238 (8%)
Query: 53 GSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVF---PRMLRDGVRPNAFTLS 109
G I A+ +F EM ++VV WT+MI GY A + F P RD V N +S
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPE--RDIVLWNTM-IS 98
Query: 110 AVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIV 169
++ L A L ++ R + N +++ YA D M+ VF+D+
Sbjct: 99 GYIEMGNMLEA-------RSLFDQMPCRDVMSW--NTVLEGYANIGD-MEACERVFDDMP 148
Query: 170 TKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAVSACASVGSGILG 227
+N SW LI GY G L F++MV +EG + P + ++ +SACA +G+ G
Sbjct: 149 ERNVFSWNGLIKGYAQNGRVSEVLGSFKRMV-DEGSVVPNDATMTLVLSACAKLGAFDFG 207
Query: 228 KQLHAAVINHGFQS-NLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
K +H G+ ++ V N+++DMY +C A + F + ++D I+WNT+I G
Sbjct: 208 KWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGL 265
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 96/181 (53%), Gaps = 7/181 (3%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGV-RP 103
+I Y G ++EA +FD M RDVV+W AM+T Y ++ +VF +ML D +P
Sbjct: 243 MISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKP 302
Query: 104 NAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSI--YVDNALMDMYATCCDSMDRA 161
+ FTL +VL AC L +L GE H V I G I ++ AL+DMY+ C +D+A
Sbjct: 303 DGFTLVSVLSACASLGSLSQGEWVH---VYIDKHGIEIEGFLATALVDMYSK-CGKIDKA 358
Query: 162 RMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASV 221
VF ++ +W ++I+ + G L +F +MV E + + +F +SAC V
Sbjct: 359 LEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHV 418
Query: 222 G 222
G
Sbjct: 419 G 419
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 129/310 (41%), Gaps = 64/310 (20%)
Query: 54 SIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLK 113
++ AH++ + + + ++I Y + + A VF ML V P+ ++ + VLK
Sbjct: 89 TVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLK 148
Query: 114 ACKGLRALFCGELAHGLAVKIG-----------------------ARGS----------- 139
AC G HGL +K G AR
Sbjct: 149 ACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVS 208
Query: 140 -----SIYVDNALMDMYATCCDSMDR---------------------ARMVFEDIVTKNA 173
S Y++ L+D D M+ A+ VF+ + ++
Sbjct: 209 WNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDV 268
Query: 174 VSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA--VSACASVGSGILGKQLH 231
VSW ++T Y H G L VF +M L++ P F++ +SACAS+GS G+ +H
Sbjct: 269 VSWNAMVTAYAHVGCYNEVLEVFNKM-LDDSTEKPDGFTLVSVLSACASLGSLSQGEWVH 327
Query: 232 AAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLD-SK 290
+ HG + + +++DMY +C +A + F +++D TWN++I+ K
Sbjct: 328 VYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGK 387
Query: 291 ESLCIFSLMV 300
++L IFS MV
Sbjct: 388 DALEIFSEMV 397
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 117/255 (45%), Gaps = 6/255 (2%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ T +++ Y + + +A +FDE+ DVV W ++ GY C S +VF ML G
Sbjct: 154 VQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRG 213
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
+ P+ F+++ L AC + AL G+ H K S ++V AL+DMYA C ++
Sbjct: 214 IEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAK-CGCIET 272
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSI--AVSAC 218
A VFE + +N SW LI GY G A ++ E+G + P S + ++AC
Sbjct: 273 AVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDG-IKPDSVVLLGVLAAC 331
Query: 219 ASVGSGILGK-QLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTIT- 276
A G G+ L +G + I+D+ CR +A +M K +
Sbjct: 332 AHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASV 391
Query: 277 WNTLIAGFETLDSKE 291
W L+ G T + E
Sbjct: 392 WGALLNGCRTHKNVE 406
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGE-LSP--FSFSIAVSA 217
A +F+ I N+ + T+I + GLR F MV EE E ++P +F + A
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVA 125
Query: 218 CASVGSGILGKQLHAAVINHG-FQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTIT 276
C +GKQ+H V+ +G F S+ V +L +Y + +A++ F E+ Q D +
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVK 185
Query: 277 WNTLIAGF 284
W+ L+ G+
Sbjct: 186 WDVLMNGY 193
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 136/310 (43%), Gaps = 68/310 (21%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRD--G 100
T ++ Y G ++EA+ LF EM R++V+WTAMI+G+ + A +F M +D
Sbjct: 235 TSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDA 294
Query: 101 VRPNAFTLSAVLKACKGLRALF--CGELAHGLAVKIGAR--GSSIYVDNALMDMYATC-- 154
V PN TL ++ AC GL F GE H + G + +L+ MYA+
Sbjct: 295 VSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGL 354
Query: 155 ----------------CD----------SMDRARMVFEDIVT-KNAVSWTTLITGYTHRG 187
C+ ++RA +FE + + + VSWT++I GY G
Sbjct: 355 IASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAG 414
Query: 188 DAFGGLRVFRQMVLEEG-----------------------------ELSPF--SFSIAVS 216
D +F+++ ++G L P ++S+ +S
Sbjct: 415 DVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLS 474
Query: 217 ACASVGSGILGKQLHAAVINHG--FQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDT 274
+ + + GK +H + + +L + NS++ MY +C +A + F +M QKDT
Sbjct: 475 SAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDT 534
Query: 275 ITWNTLIAGF 284
++WN++I G
Sbjct: 535 VSWNSMIMGL 544
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 110/226 (48%), Gaps = 3/226 (1%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
T +I Y + G + A LF ++ +D V WT MI+G + A + M+R G++
Sbjct: 404 TSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLK 463
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGA-RGSSIYVDNALMDMYATCCDSMDRA 161
P T S +L + L G+ H + K A + + N+L+ MYA C +++ A
Sbjct: 464 PLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAK-CGAIEDA 522
Query: 162 RMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASV 221
+F +V K+ VSW ++I G +H G A L +F++M+ + + +F +SAC+
Sbjct: 523 YEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHS 582
Query: 222 GSGILGKQLHAAVIN-HGFQSNLPVMNSILDMYCRCRCASEAKQFF 266
G G +L A+ + Q + S++D+ R EA++F
Sbjct: 583 GLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFI 628
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 117/286 (40%), Gaps = 56/286 (19%)
Query: 15 RPAPSVVLHHRTQLNDSPFRPK-DLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAW 73
R + ++H R L+ P R + T L+ Y G + EA LF+ M R++V
Sbjct: 52 RLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTC 111
Query: 74 TAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVK 133
AM+TGY C + AW +F M + N + + +L A C + AV+
Sbjct: 112 NAMLTGYVKCRRMNEAWTLFREMPK-----NVVSWTVMLTA-------LCDDGRSEDAVE 159
Query: 134 IGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGL 193
+ F+++ +N VSW TL+TG GD
Sbjct: 160 L------------------------------FDEMPERNVVSWNTLVTGLIRNGDMEKAK 189
Query: 194 RVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQS--NLPVMNSILD 251
+VF M + VS A + I + A + G S N+ S++
Sbjct: 190 QVFDAMPSRD----------VVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVY 239
Query: 252 MYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLD-SKESLCIF 296
YCR EA + FCEM +++ ++W +I+GF + +E+L +F
Sbjct: 240 GYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLF 285
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 113/273 (41%), Gaps = 82/273 (30%)
Query: 35 PKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFP 94
PK++ T ++ + D G ++A LFDEM R+VV+W ++TG +A +VF
Sbjct: 135 PKNVVSWTV-MLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFD 193
Query: 95 RM-LRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYAT 153
M RD V NA KG Y++N
Sbjct: 194 AMPSRDVVSWNAMI--------KG------------------------YIEN-------- 213
Query: 154 CCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVF-----RQMVLEEGELSP 208
D M+ A+++F D+ KN V+WT+++ GY GD R+F R +V +S
Sbjct: 214 --DGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISG 271
Query: 209 FSFSI-----------------AVS-----------ACASVGSGI--LGKQLHAAVINHG 238
F+++ AVS AC +G LG+QLHA VI++G
Sbjct: 272 FAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNG 331
Query: 239 FQS---NLPVMNSILDMYCRCRCASEAKQFFCE 268
+++ + + S++ MY + A+ E
Sbjct: 332 WETVDHDGRLAKSLVHMYASSGLIASAQSLLNE 364
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L L+ Y G+I++A+ +F +M +D V+W +MI G + +A +F ML G
Sbjct: 505 LQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSG 564
Query: 101 VRPNAFTLSAVLKAC 115
+PN+ T VL AC
Sbjct: 565 KKPNSVTFLGVLSAC 579
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 117/255 (45%), Gaps = 6/255 (2%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ T +++ Y + + +A +FDE+ DVV W ++ GY C S +VF ML G
Sbjct: 154 VQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKG 213
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
+ P+ F+++ L AC + AL G+ H K S ++V AL+DMYA C ++
Sbjct: 214 LEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAK-CGCIET 272
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSI--AVSAC 218
A VF+ + +N SW LI GY G A + ++ E+G + P S + ++AC
Sbjct: 273 AVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDG-IKPDSVVLLGVLAAC 331
Query: 219 ASVGSGILGKQ-LHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTIT- 276
A G G+ L + + I+D+ CR +A +M K +
Sbjct: 332 AHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASV 391
Query: 277 WNTLIAGFETLDSKE 291
W L+ G T + E
Sbjct: 392 WGALLNGCRTHKNVE 406
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGE-LSP--FSFSIAVSA 217
A +F+ I N+ + T+I + GLR F MV EE E ++P +F + A
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVA 125
Query: 218 CASVGSGILGKQLHAAVINHG-FQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTIT 276
C +GKQ+H V+ +G F S+ V +L +Y + +A++ F E+ Q D +
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVK 185
Query: 277 WNTLIAGF 284
W+ L+ G+
Sbjct: 186 WDVLMNGY 193
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 108/242 (44%), Gaps = 36/242 (14%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
L+ Y G +++A +FD + ++DV W +MITGY + +A+++F RM +RPN
Sbjct: 393 LVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPN 452
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
T + ++ +K G G + MD++ RM
Sbjct: 453 IITWNTMISG----------------YIKNGDEGEA-------MDLF---------QRME 480
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSI--AVSACASVG 222
+ V +N +W +I GY G L +FR+M P S +I + ACA++
Sbjct: 481 KDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQF--SRFMPNSVTILSLLPACANLL 538
Query: 223 SGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIA 282
+ +++H V+ + V N++ D Y + ++ F M KD ITWN+LI
Sbjct: 539 GAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIG 598
Query: 283 GF 284
G+
Sbjct: 599 GY 600
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 138/332 (41%), Gaps = 73/332 (21%)
Query: 21 VLHHRTQLNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGY 80
+LH R L P D+ + T L+ Y G I +A +FD M R++ W+AMI Y
Sbjct: 102 ILHARFGLFTEP----DVF-VETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAY 156
Query: 81 TSCNHHSRAWKVFPRMLRDGVRPNAFT----------------------------LSAVL 112
+ N K+F M++DGV P+ F +S+ L
Sbjct: 157 SRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCL 216
Query: 113 KACKGLRALF--CGEL-----------------------------AHGLAVKIGAR---- 137
+ + A++ CGEL H AV++
Sbjct: 217 RVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKE 276
Query: 138 --GSSIYVDNALMDMY---ATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGG 192
+ N L+ Y C +MD + + +T + +WT +I+G H G +
Sbjct: 277 GISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQA 336
Query: 193 LRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDM 252
L +FR+M L + + AVSAC+ + G ++H+ + GF ++ V NS++DM
Sbjct: 337 LDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDM 396
Query: 253 YCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
Y +C +A++ F + KD TWN++I G+
Sbjct: 397 YSKCGKLEDARKVFDSVKNKDVYTWNSMITGY 428
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 114/265 (43%), Gaps = 47/265 (17%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTH----RDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
LI Y G A L +M DV WTAMI+G +A +F +M G
Sbjct: 288 LIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAG 347
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
V PNA T+ + + AC L+ + G H +AVK+G + V N+L+DMY+ C ++
Sbjct: 348 VVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFI-DDVLVGNSLVDMYSK-CGKLED 405
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
AR VF+ + K+ +W ++ITGY G +F +M ++ L P
Sbjct: 406 ARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRM--QDANLRP------------ 451
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM-----TQKDTI 275
N+ N+++ Y + EA F M Q++T
Sbjct: 452 ---------------------NIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTA 490
Query: 276 TWNTLIAGF-ETLDSKESLCIFSLM 299
TWN +IAG+ + E+L +F M
Sbjct: 491 TWNLIIAGYIQNGKKDEALELFRKM 515
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 120/266 (45%), Gaps = 13/266 (4%)
Query: 26 TQLNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEM-----THRDVVAWTAMITGY 80
T++ D+ RP +T T +I Y G EA LF M R+ W +I GY
Sbjct: 442 TRMQDANLRPNIITWNT--MISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGY 499
Query: 81 TSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSS 140
A ++F +M PN+ T+ ++L AC L HG ++ +
Sbjct: 500 IQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNL--DA 557
Query: 141 IY-VDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQM 199
I+ V NAL D YA D ++ +R +F + TK+ ++W +LI GY G L +F QM
Sbjct: 558 IHAVKNALTDTYAKSGD-IEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQM 616
Query: 200 VLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVIN-HGFQSNLPVMNSILDMYCRCRC 258
+ + + S + A +G+ GK++ ++ N + L ++++ +Y R
Sbjct: 617 KTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANR 676
Query: 259 ASEAKQFFCEMT-QKDTITWNTLIAG 283
EA QF EM Q +T W + + G
Sbjct: 677 LEEALQFIQEMNIQSETPIWESFLTG 702
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 94/200 (47%), Gaps = 9/200 (4%)
Query: 88 RAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAH---GLAVKIGARGSSIYVD 144
A K + + G + T +L++C ++ G + H GL + ++V+
Sbjct: 64 EAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTE-----PDVFVE 118
Query: 145 NALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEG 204
L+ MYA C D AR VF+ + +N +W+ +I Y+ ++FR M+ +
Sbjct: 119 TKLLSMYAKCGCIAD-ARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGV 177
Query: 205 ELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQ 264
F F + CA+ G GK +H+ VI G S L V NSIL +Y +C A +
Sbjct: 178 LPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATK 237
Query: 265 FFCEMTQKDTITWNTLIAGF 284
FF M ++D I WN+++ +
Sbjct: 238 FFRRMRERDVIAWNSVLLAY 257
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 126/243 (51%), Gaps = 5/243 (2%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYT-SCNHHSRAWKVFPRMLRDGV 101
T +I Y ++G +++A +F+ +D+V + AM+ G++ S R+ ++ M R G
Sbjct: 210 TSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGF 269
Query: 102 RPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRA 161
PN T ++V+ AC L + G+ H +K G + I + ++L+DMYA C ++ A
Sbjct: 270 HPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVY-THIKMGSSLLDMYAKC-GGINDA 327
Query: 162 RMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASV 221
R VF+ + KN SWT++I GY G+ L +F +M E + +F A+SAC+
Sbjct: 328 RRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHS 387
Query: 222 GSGILGKQLHAAVI-NHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK-DTITWNT 279
G G ++ ++ ++ + + I+D+ R ++A +F M ++ D+ W
Sbjct: 388 GLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAA 447
Query: 280 LIA 282
L++
Sbjct: 448 LLS 450
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 147/323 (45%), Gaps = 44/323 (13%)
Query: 16 PAPSVVLHHRTQLNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTA 75
PAP + + F+P DL ++ L+ + G + A +FDE+ + A+
Sbjct: 48 PAPKAGKKIHADIIKTGFQP-DLN-ISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNY 105
Query: 76 MITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKG------LRALFCGELAHG 129
MI+GY + RM G + + +TLS VLKA L C L H
Sbjct: 106 MISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLC-RLVHA 164
Query: 130 LAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDA 189
+K + + AL+D Y ++ AR VFE + +N V T++I+GY ++G
Sbjct: 165 RIIKCDVELDDVLI-TALVDTYVKS-GKLESARTVFETMKDENVVCCTSMISGYMNQGFV 222
Query: 190 FGGLRVF-----RQMVLEEGELSPFS---------------------------FSIAVSA 217
+F + +V+ + FS F+ + A
Sbjct: 223 EDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGA 282
Query: 218 CASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITW 277
C+ + S +G+Q+HA ++ G +++ + +S+LDMY +C ++A++ F +M +K+ +W
Sbjct: 283 CSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSW 342
Query: 278 NTLIAGF-ETLDSKESLCIFSLM 299
++I G+ + + +E+L +F+ M
Sbjct: 343 TSMIDGYGKNGNPEEALELFTRM 365
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 125/283 (44%), Gaps = 37/283 (13%)
Query: 54 SIQEAHTLFDEMTHRDVVAWTAMITGYTSCN--HHSRAWKVFPRMLRDGV-RPNAFTLSA 110
++ A +FD + + + A++T Y+S H S A+ F M+ V RPN F
Sbjct: 72 NLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPL 131
Query: 111 VLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVT 170
VLK+ L + F L H K G + V AL+ YA+ + AR +F+++
Sbjct: 132 VLKSTPYLSSAFSTPLVHTHLFKSGFH-LYVVVQTALLHSYASSVSHITLARQLFDEMSE 190
Query: 171 KNAVSWTTLITGYTHRGDAFGGLRVFRQM------------------------------V 200
+N VSWT +++GY GD + +F M +
Sbjct: 191 RNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRM 250
Query: 201 LEEGELSPFSFSI--AVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRC 258
+ E + P ++ +SACA G+ L K +HA S++ V NS++D+Y +C
Sbjct: 251 INEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGN 310
Query: 259 ASEAKQFFCEMTQKDTITWNTLIAGFETLD-SKESLCIFSLMV 300
EA F ++K WN++I F S+E++ +F M+
Sbjct: 311 LEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMM 353
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 111/245 (45%), Gaps = 8/245 (3%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRD-GV 101
T ++ Y G I A LF++M RDV +W A++ T A +F RM+ + +
Sbjct: 197 TAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSI 256
Query: 102 RPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRA 161
RPN T+ VL AC L + H A + S ++V N+L+D+Y C + ++ A
Sbjct: 257 RPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDL-SSDVFVSNSLVDLYGKCGN-LEEA 314
Query: 162 RMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMV-LEEGELSP--FSFSIAVSAC 218
VF+ K+ +W ++I + G + + VF +M+ L ++ P +F ++AC
Sbjct: 315 SSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNAC 374
Query: 219 ASVGSGILGKQLHAAVINH-GFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK-DTIT 276
G G+ + N G + + ++D+ R EA + M K D
Sbjct: 375 THGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAI 434
Query: 277 WNTLI 281
W +L+
Sbjct: 435 WGSLL 439
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 116/242 (47%), Gaps = 6/242 (2%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
+I+ + D G ++ LF +M+ R +V+W +MI+ + C A ++F M+ G P+
Sbjct: 174 MIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPD 233
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
T+ VL L L G+ H A G I V NAL+D Y D ++ A +
Sbjct: 234 EATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGD-LEAATAI 292
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAVSACASVG 222
F + +N VSW TLI+G G G+ +F M+ EEG+++P +F ++ C+ G
Sbjct: 293 FRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMI-EEGKVAPNEATFLGVLACCSYTG 351
Query: 223 SGILGKQLHAAVINH-GFQSNLPVMNSILDMYCRCRCASEAKQFFCEM-TQKDTITWNTL 280
G++L ++ ++ +++D+ R +EA +F M + W +L
Sbjct: 352 QVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSL 411
Query: 281 IA 282
++
Sbjct: 412 LS 413
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 119/260 (45%), Gaps = 38/260 (14%)
Query: 58 AHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKG 117
A+ +F + + +V+ + AMI Y+ + F M G+ + +T + +LK+C
Sbjct: 55 ANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSS 114
Query: 118 LRALFCGELAHGLAVKIG-ARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSW 176
L L G+ HG ++ G R I + ++++Y T M A+ VF+++ +N V W
Sbjct: 115 LSDLRFGKCVHGELIRTGFHRLGKIRI--GVVELY-TSGGRMGDAQKVFDEMSERNVVVW 171
Query: 177 TTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSAC------------------ 218
+I G+ GD GL +F+QM E +S S ++S C
Sbjct: 172 NLMIRGFCDSGDVERGLHLFKQMS-ERSIVSWNSMISSLSKCGRDREALELFCEMIDQGF 230
Query: 219 --------------ASVGSGILGKQLHAAVINHG-FQSNLPVMNSILDMYCRCRCASEAK 263
AS+G GK +H+ + G F+ + V N+++D YC+ A
Sbjct: 231 DPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAAT 290
Query: 264 QFFCEMTQKDTITWNTLIAG 283
F +M +++ ++WNTLI+G
Sbjct: 291 AIFRKMQRRNVVSWNTLISG 310
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 76/163 (46%), Gaps = 4/163 (2%)
Query: 141 IYVDNALMDMYATCCDSM---DRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFR 197
++ N L+ + + C S+ D A VF I N + + +I Y+ G L F
Sbjct: 32 LHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFS 91
Query: 198 QMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCR 257
M ++++ + +C+S+ GK +H +I GF + ++++Y
Sbjct: 92 SMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGG 151
Query: 258 CASEAKQFFCEMTQKDTITWNTLIAGF-ETLDSKESLCIFSLM 299
+A++ F EM++++ + WN +I GF ++ D + L +F M
Sbjct: 152 RMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQM 194
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 65/164 (39%), Gaps = 21/164 (12%)
Query: 36 KDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPR 95
KD + L+ Y G ++ A +F +M R+VV+W +I+G +F
Sbjct: 267 KDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDA 326
Query: 96 MLRDG-VRPNAFTLSAVLKACKGLRALFCGELAHGLAV---KIGARGSSIYVDNALMDMY 151
M+ +G V PN T VL C + GE GL + K+ AR + Y
Sbjct: 327 MIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEAR----------TEHY 376
Query: 152 ATCCDSMDRARMVFEDI-------VTKNAVSWTTLITGYTHRGD 188
D M R+ + E V NA W +L++ GD
Sbjct: 377 GAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGD 420
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 110/229 (48%), Gaps = 5/229 (2%)
Query: 73 WTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAV 132
W + GY+S + + V+ M R G++PN T +LKAC L G +
Sbjct: 81 WNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVL 140
Query: 133 KIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGG 192
K G +YV N L+ +Y TC + D AR VF+++ +N VSW +++T G
Sbjct: 141 KHGF-DFDVYVGNNLIHLYGTCKKTSD-ARKVFDEMTERNVVSWNSIMTALVENGKLNLV 198
Query: 193 LRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDM 252
F +M+ + + + +SAC G+ LGK +H+ V+ + N + +++DM
Sbjct: 199 FECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDM 256
Query: 253 YCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLD-SKESLCIFSLMV 300
Y + A+ F M K+ TW+ +I G ++E+L +FS M+
Sbjct: 257 YAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMM 305
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 117/245 (47%), Gaps = 9/245 (3%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
+LI Y +A +FDEMT R+VV+W +++T + ++ F M+
Sbjct: 152 NNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFC 211
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
P+ T+ +L AC G +L G+L H V + + + AL+DMYA ++ AR
Sbjct: 212 PDETTMVVLLSACGGNLSL--GKLVHS-QVMVRELELNCRLGTALVDMYAK-SGGLEYAR 267
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVG 222
+VFE +V KN +W+ +I G G A L++F +M ++E + P + CA
Sbjct: 268 LVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKM-MKESSVRPNYVTFLGVLCACSH 326
Query: 223 SGILG---KQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT-QKDTITWN 278
+G++ K H H + + +++D+ R +EA F +M + D + W
Sbjct: 327 TGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWR 386
Query: 279 TLIAG 283
TL++
Sbjct: 387 TLLSA 391
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 59/110 (53%)
Query: 175 SWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAV 234
+W L GY+ + V+ +M + + +F + ACAS G+Q+ V
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 235 INHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
+ HGF ++ V N+++ +Y C+ S+A++ F EMT+++ ++WN+++
Sbjct: 140 LKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTAL 189
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 80/179 (44%), Gaps = 22/179 (12%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRD- 99
L T L+ Y G ++ A +F+ M ++V W+AMI G A ++F +M+++
Sbjct: 249 LGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKES 308
Query: 100 GVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD 159
VRPN T VL AC G + G K I+ +M Y D +
Sbjct: 309 SVRPNYVTFLGVLCACS-----HTGLVDDG--YKYFHEMEKIHKIKPMMIHYGAMVDILG 361
Query: 160 RARMVFE--DIVTK-----NAVSWTTLITGYT--HRGDAFG-GLRVFRQMVLEEGELSP 208
RA + E D + K +AV W TL++ + H D G G +V ++++ EL P
Sbjct: 362 RAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLI----ELEP 416
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 131/279 (46%), Gaps = 38/279 (13%)
Query: 58 AHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKG 117
A + + + R+ WTA+I GY A ++ M ++ + P +FT SA+LKAC
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 118 LRALFCGELAHGLAVKIGARG-SSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSW 176
++ L G H ++ RG +YV N ++DMY C+S+D AR VF+++ ++ +SW
Sbjct: 162 MKDLNLGRQFHAQTFRL--RGFCFVYVGNTMIDMYVK-CESIDCARKVFDEMPERDVISW 218
Query: 177 TTLITGYTHRGDAFGGLRVF-----RQMV------------------------LEEGELS 207
T LI Y G+ +F + MV +E+ +
Sbjct: 219 TELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIR 278
Query: 208 PFSFSIA--VSACASVGSGILGKQLHAAVINHGF--QSNLPVMNSILDMYCRCRCASEAK 263
++A +SACA +G+ + G+ ++ + ++++DMY +C EA
Sbjct: 279 ADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAV 338
Query: 264 QFFCEMTQKDTITWNTLIAGFETLD-SKESLCIFSLMVS 301
F M K+ T++++I G T ++E+L +F MV+
Sbjct: 339 NVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVT 377
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 117/232 (50%), Gaps = 6/232 (2%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
T+LI +Y G+++ A LF+ + +D+VAWTAM+TG+ A + F RM + G+R
Sbjct: 219 TELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIR 278
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSS-IYVDNALMDMYATCCDSMDRA 161
+ T++ + AC L A + A +A K G S + + +AL+DMY+ C +++ A
Sbjct: 279 ADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSK-CGNVEEA 337
Query: 162 RMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAVSACA 219
VF + KN +++++I G G A L +F MV + E+ P +F A+ AC+
Sbjct: 338 VNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQT-EIKPNTVTFVGALMACS 396
Query: 220 SVGSGILGKQLHAAVIN-HGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT 270
G G+Q+ ++ G Q ++D+ R EA + M+
Sbjct: 397 HSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMS 448
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 113/228 (49%), Gaps = 5/228 (2%)
Query: 57 EAHTLFDEMTHR-DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKAC 115
E LF E T +VV+WT++I G A ++F M GV+PN T+ ++L AC
Sbjct: 339 EMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPAC 398
Query: 116 KGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVS 175
+ AL G HG AV++ +++V +AL+DMYA C ++ +++VF + TKN V
Sbjct: 399 GNIAALGHGRSTHGFAVRVHLL-DNVHVGSALIDMYAKC-GRINLSQIVFNMMPTKNLVC 456
Query: 176 WTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILG-KQLHAAV 234
W +L+ G++ G A + +F ++ + SF+ +SAC VG G K
Sbjct: 457 WNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMS 516
Query: 235 INHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT-QKDTITWNTLI 281
+G + L + ++++ R EA EM + D+ W L+
Sbjct: 517 EEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALL 564
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 133/295 (45%), Gaps = 41/295 (13%)
Query: 45 LIKSYFDKGSIQEAHTLFDEM----THRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L+ +Y KG ++E + EM ++V+W +++G+ +H A +F ++ G
Sbjct: 188 LLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLG 247
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMY--------- 151
P+ T+S+VL + L G L HG +K G + +A++DMY
Sbjct: 248 FCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVI-SAMIDMYGKSGHVYGI 306
Query: 152 -----------ATCCDS----------MDRARMVFE----DIVTKNAVSWTTLITGYTHR 186
A C++ +D+A +FE + N VSWT++I G
Sbjct: 307 ISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQN 366
Query: 187 GDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVM 246
G L +FR+M + + + + + AC ++ + G+ H + N+ V
Sbjct: 367 GKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVG 426
Query: 247 NSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETL-DSKESLCIF-SLM 299
++++DMY +C + ++ F M K+ + WN+L+ GF +KE + IF SLM
Sbjct: 427 SALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLM 481
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 110/285 (38%), Gaps = 49/285 (17%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
++ LI SY + +A + + + +++++I T +++ VF RM G
Sbjct: 52 ISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHG 111
Query: 101 ------VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATC 154
V PN F + A L A K + + C GL + +V ++ MY
Sbjct: 112 LIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDM-------DAFVQGSMFHMYMR- 163
Query: 155 CDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQM---------VLEEGE 205
C M AR VF+ + K+ V+ + L+ Y +G +R+ +M V G
Sbjct: 164 CGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGI 223
Query: 206 LSPFSFS----------------------IAVSAC-ASVGSGI---LGKQLHAAVINHGF 239
LS F+ S + VS+ SVG +G+ +H VI G
Sbjct: 224 LSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGL 283
Query: 240 QSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
+ V+++++DMY + F + + N I G
Sbjct: 284 LKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGL 328
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 10/162 (6%)
Query: 127 AHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHR 186
AH +K GA+ Y+ L+ Y+ + + A +V + I S+++LI T
Sbjct: 37 AHARILKSGAQNDG-YISAKLIASYSNY-NCFNDADLVLQSIPDPTIYSFSSLIYALTKA 94
Query: 187 GDAFGGLRVFRQM----VLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSN 242
+ VF +M ++ + + P F + CA + + +GKQ+H G +
Sbjct: 95 KLFTQSIGVFSRMFSHGLIPDSHVLPNLFKV----CAELSAFKVGKQIHCVSCVSGLDMD 150
Query: 243 LPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
V S+ MY RC +A++ F M+ KD +T + L+ +
Sbjct: 151 AFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAY 192
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 145/357 (40%), Gaps = 102/357 (28%)
Query: 38 LTGLTTD-LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFP-- 94
LT ++++ L+ Y G ++EA +FDEM R+V +W A+I Y N+ A ++F
Sbjct: 21 LTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESD 80
Query: 95 ----------------------------------RMLRDGVRPNAFTLSAVLKACKGLRA 120
R +D + + FT++ ++K L
Sbjct: 81 NCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTN 140
Query: 121 LFCGELAHGLAVKIGARGSSIYVDNALMDMYATC------CDSMDRARMVFEDIVTKNA- 173
+F GE HG+ VK G G+ V ++L+ MY+ C C+ + + + F D V +NA
Sbjct: 141 VFYGEQLHGVLVKTGNDGTKFAV-SSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAM 199
Query: 174 --------------------------VSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELS 207
+SW TLI GY G L++ M +
Sbjct: 200 IAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWD 259
Query: 208 PFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRC----------- 256
SF ++ +S+ S +GK++HA V+ +G SN V + I+D+YC+C
Sbjct: 260 EHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHL 319
Query: 257 -------RCAS-------------EAKQFFCEMTQKDTITWNTLIAGFETLDSKESL 293
AS EAK+ F +++K+ + W + G+ L +S+
Sbjct: 320 LYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSV 376
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 118/272 (43%), Gaps = 35/272 (12%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTH-RDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRP 103
+I +Y +G I +A ++F D ++W +I GY + A K+ M +G++
Sbjct: 199 MIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKW 258
Query: 104 NAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCD------- 156
+ + AVL L++L G+ H +K G+ S+ +V + ++D+Y C +
Sbjct: 259 DEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSY-SNKFVSSGIVDVYCKCGNMKYAESA 317
Query: 157 -----------------------SMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGL 193
M A+ +F+ + KN V WT + GY + L
Sbjct: 318 HLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVL 377
Query: 194 RVFRQMVLEEGELSPFSFSIA--VSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILD 251
+ R + E +P S + + AC+ GK++H + G + ++ + +D
Sbjct: 378 ELARAFIANETN-TPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVD 436
Query: 252 MYCRCRCASEAKQFFCEMTQKDTITWNTLIAG 283
MY +C A++ F ++DT+ +N +IAG
Sbjct: 437 MYSKCGNVEYAERIFDSSFERDTVMYNAMIAG 468
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 91/196 (46%), Gaps = 7/196 (3%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
+ +I Y +G + EA LFD ++ +++V WTAM GY + ++ + +
Sbjct: 330 SSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETN 389
Query: 103 -PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRA 161
P++ + +VL AC + G+ HG +++ G V A +DMY+ C + ++ A
Sbjct: 390 TPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLV-TAFVDMYSKCGN-VEYA 447
Query: 162 RMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAVSACA 219
+F+ ++ V + +I G H G + F M EG P +F +SAC
Sbjct: 448 ERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMT--EGGFKPDEITFMALLSACR 505
Query: 220 SVGSGILGKQLHAAVI 235
G + G++ ++I
Sbjct: 506 HRGLVLEGEKYFKSMI 521
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L T + Y G+++ A +FD RD V + AMI G H +++++ F M G
Sbjct: 430 LVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGG 489
Query: 101 VRPNAFTLSAVLKACKGLRALFCGE 125
+P+ T A+L AC+ + GE
Sbjct: 490 FKPDEITFMALLSACRHRGLVLEGE 514
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 140/340 (41%), Gaps = 75/340 (22%)
Query: 36 KDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPR 95
K+ + +L+ Y G + +A+ LF EM R+ ++W MI G++ A K+F
Sbjct: 190 KENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEW 249
Query: 96 MLRDGVRPNAFTLSAVLK-----------------------------------ACKGLRA 120
M R+ +P+ T ++VL C L A
Sbjct: 250 MQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEA 309
Query: 121 LFCGELAHGLAVKIG------ARGSSIYVD------------------------NALMDM 150
L E HG +K G +R + I+V N+L+
Sbjct: 310 LSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITS 369
Query: 151 YATCCDSMDRARMVFEDI--------VTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLE 202
+ +D A +F ++ V N V+WT++I G +G L FRQM
Sbjct: 370 FVDA-GKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFS 428
Query: 203 EGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEA 262
+ + + +S CA + + LG+++H VI N+ V N++++MY +C SE
Sbjct: 429 KVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEG 488
Query: 263 KQFFCEMTQKDTITWNTLIAGFETLD-SKESLCIFSLMVS 301
F + KD I+WN++I G+ ++++L +F M+S
Sbjct: 489 SLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMIS 528
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 130/282 (46%), Gaps = 24/282 (8%)
Query: 13 DFRPAPSVVLH---HRTQLNDSP--FRPKDLTGLTT--DLIKSYFDKGSIQEAHTLF--- 62
++ P+ + ++H + ++ D+ FR G+ + LI S+ D G + EA +LF
Sbjct: 327 EYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSEL 386
Query: 63 DEMTH-----RDVVAWTAMITGYTSCNHHSR---AWKVFPRMLRDGVRPNAFTLSAVLKA 114
+EM H +VV WT++I G CN R + + F +M V N+ T+ +L
Sbjct: 387 EEMNHVCNVKANVVTWTSVIKG---CNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSI 443
Query: 115 CKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAV 174
C L AL G HG ++ + +I V NAL++MYA C + +VFE I K+ +
Sbjct: 444 CAELPALNLGREIHGHVIRT-SMSENILVQNALVNMYAKC-GLLSEGSLVFEAIRDKDLI 501
Query: 175 SWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAV 234
SW ++I GY G A L +F +M+ + +SAC+ G G+++ ++
Sbjct: 502 SWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSM 561
Query: 235 INH-GFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTI 275
G + I+D+ R EA + M + +
Sbjct: 562 SKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKV 603
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 137/315 (43%), Gaps = 44/315 (13%)
Query: 22 LHHRTQLNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTH---RDVVAWTAMIT 78
+H + L+D FR L +LI Y G + +A +F+ ++ D+ W +++
Sbjct: 75 VHAQVLLSDFIFRSGSLAA---NLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILK 131
Query: 79 GYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARG 138
S + A +++ M + G+ + + L +L+AC+ L H ++IG +
Sbjct: 132 ANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLK- 190
Query: 139 SSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQ 198
+++V N L+ +Y M A +F ++ +N +SW +I G++ D +++F
Sbjct: 191 ENLHVVNELLTLYPKA-GRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEW 249
Query: 199 MVLEE-----------------------------------GELSPFSFSIAVSACASVGS 223
M EE +S + ++ S CA + +
Sbjct: 250 MQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEA 309
Query: 224 GILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAG 283
+ +++H VI GF+ LP N+++ +Y + +A+ F ++ K +WN+LI
Sbjct: 310 LSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITS 369
Query: 284 F-ETLDSKESLCIFS 297
F + E+L +FS
Sbjct: 370 FVDAGKLDEALSLFS 384
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 5/157 (3%)
Query: 147 LMDMYATCCDSMDRARMVFEDI---VTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEE 203
L+ +YA +D AR VFE + + + W +++ G L ++R M
Sbjct: 95 LISVYARLGLLLD-ARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRG 153
Query: 204 GELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAK 263
+ + + AC +G L + H VI G + NL V+N +L +Y + +A
Sbjct: 154 LTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAY 213
Query: 264 QFFCEMTQKDTITWNTLIAGF-ETLDSKESLCIFSLM 299
F EM ++ ++WN +I GF + D + ++ IF M
Sbjct: 214 NLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWM 250
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 116/249 (46%), Gaps = 10/249 (4%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
++ LI Y ++EA+++F+ M RD+ W +++ + C H +F RML G
Sbjct: 299 VSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSG 358
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGA---RGSSIYVDNALMDMYATCCDS 157
+RP+ TL+ VL C L +L G HG + G + S+ ++ N+LMDMY C D
Sbjct: 359 IRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDL 418
Query: 158 MDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSA 217
D ARMVF+ + K++ SW +I GY + L +F M + +F + A
Sbjct: 419 RD-ARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQA 477
Query: 218 CASVGSGILGKQLHAAVINHGFQSNLPVMNS---ILDMYCRCRCASEAKQFFCEMTQKDT 274
C+ SG L + + + LP + ++DM R EA + D
Sbjct: 478 CSH--SGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDN 535
Query: 275 -ITWNTLIA 282
+ W ++++
Sbjct: 536 PVVWRSILS 544
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 133/275 (48%), Gaps = 13/275 (4%)
Query: 28 LNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHS 87
L+DSP T L+ Y G ++ A +F + RDV + A+I+G+
Sbjct: 92 LDDSP-------RAGTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPL 143
Query: 88 RAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNAL 147
A + + M +G+ P+ +T ++LK + L + HGLA K+G S YV + L
Sbjct: 144 DAMETYREMRANGILPDKYTFPSLLKGSDAME-LSDVKKVHGLAFKLGF-DSDCYVGSGL 201
Query: 148 MDMYATCCDSMDRARMVFEDIVTKN-AVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGEL 206
+ Y+ S++ A+ VF+++ ++ +V W L+ GY+ L VF +M E +
Sbjct: 202 VTSYSKFM-SVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGV 260
Query: 207 SPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFF 266
S + + +SA G G+ +H + G S++ V N+++DMY + + EA F
Sbjct: 261 SRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIF 320
Query: 267 CEMTQKDTITWNTLIAGFETL-DSKESLCIFSLMV 300
M ++D TWN+++ + D +L +F M+
Sbjct: 321 EAMDERDLFTWNSVLCVHDYCGDHDGTLALFERML 355
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 5/198 (2%)
Query: 104 NAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARM 163
N T A L+ C + G+ HG V+ G S +L++MYA C M RA +
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAK-CGLMRRAVL 117
Query: 164 VFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGS 223
VF ++ + LI+G+ G + +R+M ++F + ++
Sbjct: 118 VFGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMEL 176
Query: 224 GILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK-DTITWNTLIA 282
+ K++H GF S+ V + ++ Y + +A++ F E+ + D++ WN L+
Sbjct: 177 SDV-KKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVN 235
Query: 283 GF-ETLDSKESLCIFSLM 299
G+ + +++L +FS M
Sbjct: 236 GYSQIFRFEDALLVFSKM 253
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 38/284 (13%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
LI Y G + A LFD M+ RD V+W A+I YTS A+K+ RM GV +
Sbjct: 225 LISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEAS 284
Query: 105 AFTLSAV-----------------------------------LKACKGLRALFCGELAHG 129
T + + LKAC + AL G++ H
Sbjct: 285 IVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHC 344
Query: 130 LAVKIGARGSSI-YVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGD 188
L ++ + I V N+L+ MY+ C D + A +VF+ + + +W ++I+G+ +
Sbjct: 345 LVIRSCSFSHDIDNVRNSLITMYSRCSD-LRHAFIVFQQVEANSLSTWNSIISGFAYNER 403
Query: 189 AFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVIN-HGFQSNLPVMN 247
+ + ++M+L + + + + A VG+ GK+ H ++ ++ L + N
Sbjct: 404 SEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWN 463
Query: 248 SILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLDSKE 291
S++DMY + AK+ F M ++D +T+ +LI G+ L E
Sbjct: 464 SLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGE 507
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 110/257 (42%), Gaps = 9/257 (3%)
Query: 31 SPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFD-EMTHRDVVAWTAMITGYTSCNHHSRA 89
SP R L GLT I + + Q + + TH D + + C H +
Sbjct: 4 SPSRSI-LRGLTVSEICKFIPQSWKQLPRPISETSKTHDDESVPQVLFNSFRHCISHGQL 62
Query: 90 WKVFP--RMLRDGVRPNAFTL---SAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVD 144
++ F +LR + F L +++L C G G+ H + G S+ V
Sbjct: 63 YEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVP 122
Query: 145 NALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEG 204
+ + + + +D A+ + E+ + + W LI Y + V+++M+ +
Sbjct: 123 KLVT--FYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGI 180
Query: 205 ELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQ 264
F++ + ACA++ G+ +H ++ + NL V N+++ MY R A++
Sbjct: 181 RADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARR 240
Query: 265 FFCEMTQKDTITWNTLI 281
F M+++D ++WN +I
Sbjct: 241 LFDRMSERDAVSWNAII 257
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 101/235 (42%), Gaps = 10/235 (4%)
Query: 37 DLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRM 96
D+ + LI Y ++ A +F ++ + W ++I+G+ + M
Sbjct: 355 DIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEM 414
Query: 97 LRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCD 156
L G PN TL+++L + L G+ H ++ + + + N+L+DMYA +
Sbjct: 415 LLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGE 474
Query: 157 SMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVS 216
+ A+ VF+ + ++ V++T+LI GY G L F+ M + + +S
Sbjct: 475 II-AAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLS 533
Query: 217 ACASV-----GSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFF 266
AC+ G + K H G + L + ++D+YCR +A+ F
Sbjct: 534 ACSHSNLVREGHWLFTKMEHV----FGIRLRLEHYSCMVDLYCRAGYLDKARDIF 584
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 59/138 (42%), Gaps = 11/138 (7%)
Query: 36 KDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPR 95
KD L L+ Y G I A +FD M RD V +T++I GY A F
Sbjct: 456 KDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKD 515
Query: 96 MLRDGVRPNAFTLSAVLKACKGLRALFCG-----ELAHGLAVKIGARGSSIYVDNALMDM 150
M R G++P+ T+ AVL AC + G ++ H +++ S VD
Sbjct: 516 MDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAG 575
Query: 151 YATCCDSMDRARMVFEDI 168
Y +D+AR +F I
Sbjct: 576 Y------LDKARDIFHTI 587
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 131/253 (51%), Gaps = 11/253 (4%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHR-DVVAWTAMITGYTSCNHHSRAWKVFPRMLRD 99
+ T L+ Y G + A +FDE + ++V WTAMI+ YT + A ++F RM +
Sbjct: 102 IQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAE 161
Query: 100 GVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGAR-GSSIYVDNALMDMYATCCDSM 158
+ + ++ L AC L A+ GE + ++K R + + N+L++MY ++
Sbjct: 162 KIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGET- 220
Query: 159 DRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQM-VLEEGE---LSP--FSFS 212
++AR +F++ + K+ ++T++I GY G A L +F++M +++ + ++P +F
Sbjct: 221 EKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFI 280
Query: 213 IAVSACASVGSGILGKQ-LHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQ 271
+ AC+ G GK+ + ++++ + ++D++CR +A +F +M
Sbjct: 281 GVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPI 340
Query: 272 K-DTITWNTLIAG 283
K +T+ W TL+
Sbjct: 341 KPNTVIWRTLLGA 353
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 100/180 (55%), Gaps = 6/180 (3%)
Query: 124 GELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTK-NAVSWTTLITG 182
G H L K+G + I + +L+ Y++ D +D AR VF++ K N V WT +I+
Sbjct: 84 GRQIHALVRKLGF-NAVIQIQTSLVGFYSSVGD-VDYARQVFDETPEKQNIVLWTAMISA 141
Query: 183 YTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHG--FQ 240
YT ++ + +F++M E+ EL ++A+SACA +G+ +G+++++ I
Sbjct: 142 YTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLA 201
Query: 241 SNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFE-TLDSKESLCIFSLM 299
+L + NS+L+MY + +A++ F E +KD T+ ++I G+ ++ESL +F M
Sbjct: 202 MDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKM 261
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 38/284 (13%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
LI Y G + A LFD M+ RD V+W A+I YTS A+K+ RM GV +
Sbjct: 225 LISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEAS 284
Query: 105 AFTLSAV-----------------------------------LKACKGLRALFCGELAHG 129
T + + LKAC + AL G++ H
Sbjct: 285 IVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHC 344
Query: 130 LAVKIGARGSSI-YVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGD 188
L ++ + I V N+L+ MY+ C D + A +VF+ + + +W ++I+G+ +
Sbjct: 345 LVIRSCSFSHDIDNVRNSLITMYSRCSD-LRHAFIVFQQVEANSLSTWNSIISGFAYNER 403
Query: 189 AFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVIN-HGFQSNLPVMN 247
+ + ++M+L + + + + A VG+ GK+ H ++ ++ L + N
Sbjct: 404 SEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWN 463
Query: 248 SILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLDSKE 291
S++DMY + AK+ F M ++D +T+ +LI G+ L E
Sbjct: 464 SLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGE 507
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 110/257 (42%), Gaps = 9/257 (3%)
Query: 31 SPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFD-EMTHRDVVAWTAMITGYTSCNHHSRA 89
SP R L GLT I + + Q + + TH D + + C H +
Sbjct: 4 SPSRSI-LRGLTVSEICKFIPQSWKQLPRPISETSKTHDDESVPQVLFNSFRHCISHGQL 62
Query: 90 WKVFP--RMLRDGVRPNAFTL---SAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVD 144
++ F +LR + F L +++L C G G+ H + G S+ V
Sbjct: 63 YEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVP 122
Query: 145 NALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEG 204
+ + + + +D A+ + E+ + + W LI Y + V+++M+ +
Sbjct: 123 KLVT--FYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGI 180
Query: 205 ELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQ 264
F++ + ACA++ G+ +H ++ + NL V N+++ MY R A++
Sbjct: 181 RADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARR 240
Query: 265 FFCEMTQKDTITWNTLI 281
F M+++D ++WN +I
Sbjct: 241 LFDRMSERDAVSWNAII 257
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 101/235 (42%), Gaps = 10/235 (4%)
Query: 37 DLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRM 96
D+ + LI Y ++ A +F ++ + W ++I+G+ + M
Sbjct: 355 DIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEM 414
Query: 97 LRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCD 156
L G PN TL+++L + L G+ H ++ + + + N+L+DMYA +
Sbjct: 415 LLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGE 474
Query: 157 SMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVS 216
+ A+ VF+ + ++ V++T+LI GY G L F+ M + + +S
Sbjct: 475 II-AAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLS 533
Query: 217 ACASV-----GSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFF 266
AC+ G + K H G + L + ++D+YCR +A+ F
Sbjct: 534 ACSHSNLVREGHWLFTKMEHV----FGIRLRLEHYSCMVDLYCRAGYLDKARDIF 584
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 59/138 (42%), Gaps = 11/138 (7%)
Query: 36 KDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPR 95
KD L L+ Y G I A +FD M RD V +T++I GY A F
Sbjct: 456 KDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKD 515
Query: 96 MLRDGVRPNAFTLSAVLKACKGLRALFCG-----ELAHGLAVKIGARGSSIYVDNALMDM 150
M R G++P+ T+ AVL AC + G ++ H +++ S VD
Sbjct: 516 MDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAG 575
Query: 151 YATCCDSMDRARMVFEDI 168
Y +D+AR +F I
Sbjct: 576 Y------LDKARDIFHTI 587
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 123/259 (47%), Gaps = 13/259 (5%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
T +I +G + EA +FDEM+ R V+ WT M+TGY N A K+F M +
Sbjct: 176 TSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPE---K 232
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
S ++ + R EL + VK + NA++ + + +AR
Sbjct: 233 TEVSWTSMLMGYVQNGRIEDAEELFEVMPVK------PVIACNAMISGLGQKGE-IAKAR 285
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAV-SACASV 221
VF+ + +N SW T+I + G L +F M ++G F I++ S CAS+
Sbjct: 286 RVFDSMKERNDASWQTVIKIHERNGFELEALDLFILM-QKQGVRPTFPTLISILSVCASL 344
Query: 222 GSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLI 281
S GKQ+HA ++ F ++ V + ++ MY +C ++K F KD I WN++I
Sbjct: 345 ASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSII 404
Query: 282 AGFETLD-SKESLCIFSLM 299
+G+ + +E+L +F M
Sbjct: 405 SGYASHGLGEEALKVFCEM 423
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 115/246 (46%), Gaps = 7/246 (2%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
+I KG I +A +FD M R+ +W +I + A +F M + GVRP
Sbjct: 271 MISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPT 330
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
TL ++L C L +L G+ H V+ +YV + LM MY C + + +++++
Sbjct: 331 FPTLISILSVCASLASLHHGKQVHAQLVRCQF-DVDVYVASVLMTMYIKCGE-LVKSKLI 388
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAVSACASVG 222
F+ +K+ + W ++I+GY G L+VF +M L G P +F +SAC+ G
Sbjct: 389 FDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPL-SGSTKPNEVTFVATLSACSYAG 447
Query: 223 SGILGKQLHAAVIN-HGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT-QKDTITWNTL 280
G +++ ++ + G + ++DM R +EA + MT + D W +L
Sbjct: 448 MVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSL 507
Query: 281 IAGFET 286
+ T
Sbjct: 508 LGACRT 513
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 94/232 (40%), Gaps = 49/232 (21%)
Query: 53 GSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVL 112
G I EA LFD + + +W +M+ GY + A K+F M P+ +S
Sbjct: 31 GKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------PDRNIIS--- 81
Query: 113 KACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKN 172
L G + +G +D AR VF+ + +N
Sbjct: 82 -----WNGLVSGYMKNG---------------------------EIDEARKVFDLMPERN 109
Query: 173 AVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHA 232
VSWT L+ GY H G +F +M E + S+++ + G +L+
Sbjct: 110 VVSWTALVKGYVHNGKVDVAESLFWKM----PEKNKVSWTVMLIGFLQDGRIDDACKLYE 165
Query: 233 AVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
+ + + N+ S++ C+ EA++ F EM+++ ITW T++ G+
Sbjct: 166 MIPD---KDNI-ARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGY 213
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 108/262 (41%), Gaps = 58/262 (22%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
T L+K Y G + A +LF +M ++ V+WT M+ G+ A K++ M+ D +
Sbjct: 114 TALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLY-EMIPD--K 170
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
N S + CK R E+ ++ + S+ ++ Y + +D AR
Sbjct: 171 DNIARTSMIHGLCKEGRVDEAREIFDEMSER------SVITWTTMVTGYGQ-NNRVDDAR 223
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVG 222
+F+ + K VSWT+++ GY G +F M ++ V AC ++
Sbjct: 224 KIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVK-----------PVIACNAMI 272
Query: 223 SGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIA 282
SG LG++ A +A++ F M +++ +W T+I
Sbjct: 273 SG-LGQKGEIA---------------------------KARRVFDSMKERNDASWQTVIK 304
Query: 283 -----GFETLDSKESLCIFSLM 299
GFE E+L +F LM
Sbjct: 305 IHERNGFEL----EALDLFILM 322
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 118/273 (43%), Gaps = 34/273 (12%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSR-AWKVFP-RMLR 98
L LI G Q A +F+++ W MI S NH R A +F M+
Sbjct: 54 LVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSL-SVNHKPREALLLFILMMIS 112
Query: 99 DGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATC---- 154
+ + FT V+KAC ++ G HGLA+K G + ++ N LMD+Y C
Sbjct: 113 HQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFF-NDVFFQNTLMDLYFKCGKPD 171
Query: 155 --------------------------CDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGD 188
+D A +VF + +N VSWT +IT Y
Sbjct: 172 SGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRR 231
Query: 189 AFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNS 248
++FR+M +++ + + F+ + A +GS +G+ +H +GF + + +
Sbjct: 232 PDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTA 291
Query: 249 ILDMYCRCRCASEAKQFFCEMTQKDTITWNTLI 281
++DMY +C +A++ F M K TWN++I
Sbjct: 292 LIDMYSKCGSLQDARKVFDVMQGKSLATWNSMI 324
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 93/182 (51%), Gaps = 3/182 (1%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
T ++ + A +F++M R+VV+WTAMIT Y A+++F RM D V+
Sbjct: 189 TTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVK 248
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
PN FT+ +L+A L +L G H A K G ++ AL+DMY+ C S+ AR
Sbjct: 249 PNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFV-LDCFLGTALIDMYSK-CGSLQDAR 306
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEG-ELSPFSFSIAVSACASV 221
VF+ + K+ +W ++IT G L +F +M E E +F +SACA+
Sbjct: 307 KVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANT 366
Query: 222 GS 223
G+
Sbjct: 367 GN 368
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 64/135 (47%), Gaps = 4/135 (2%)
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVF-RQMVLEEGELSPFSFSIAVSACA 219
A +VF + + + +W +I + L +F M+ + + F+F + AC
Sbjct: 71 ASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACL 130
Query: 220 SVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNT 279
+ S LG Q+H I GF +++ N+++D+Y +C ++ F +M + ++W T
Sbjct: 131 ASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTT 190
Query: 280 LIAGF---ETLDSKE 291
++ G LDS E
Sbjct: 191 MLYGLVSNSQLDSAE 205
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 112/245 (45%), Gaps = 11/245 (4%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
+I G + AH LFDEM +++++W MI+ Y N+ + +F M+R G + N
Sbjct: 190 IIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGN 249
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
TL +L AC L G H ++ SS+ +D AL+DMY C + AR +
Sbjct: 250 ESTLVLLLNACGRSARLKEGRSVHASLIRT-FLNSSVVIDTALIDMYGK-CKEVGLARRI 307
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAVSACASVG 222
F+ + +N V+W +I + G GGL +F M+ G L P +F + CA G
Sbjct: 308 FDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMI--NGMLRPDEVTFVGVLCGCARAG 365
Query: 223 SGILGKQLHAAVINH-GFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKD----TITW 277
G+ ++ +++ + N + ++Y EA++ + +D + W
Sbjct: 366 LVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKW 425
Query: 278 NTLIA 282
L++
Sbjct: 426 ANLLS 430
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 104/217 (47%), Gaps = 33/217 (15%)
Query: 96 MLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCC 155
+LR G P+++T +++ + + G++ HG A+K G + V N+LM MY TCC
Sbjct: 109 ILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGC-DQVLPVQNSLMHMY-TCC 166
Query: 156 DSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGG----------------------- 192
++D A+ +F +I ++ VSW ++I G GD
Sbjct: 167 GALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYL 226
Query: 193 --------LRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLP 244
+ +FR+MV + + + + ++AC G+ +HA++I S++
Sbjct: 227 GANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVV 286
Query: 245 VMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLI 281
+ +++DMY +C+ A++ F ++ ++ +TWN +I
Sbjct: 287 IDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMI 323
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%)
Query: 227 GKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAG 283
GK H I HG LPV NS++ MY C AK+ F E+ ++D ++WN++IAG
Sbjct: 137 GKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAG 193
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 117/259 (45%), Gaps = 44/259 (16%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
+IK+Y G + A LFD+M RD ++W MI GY + A+ +F M PN
Sbjct: 287 MIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM------PN 340
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
AH N ++ YA+ + ++ AR
Sbjct: 341 --------------------RDAHSW--------------NMMVSGYASVGN-VELARHY 365
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
FE K+ VSW ++I Y D + +F +M +E + P + + +SA + +
Sbjct: 366 FEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNL 425
Query: 225 ILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT-QKDTITWNTLIAG 283
LG Q+H V+ ++PV N+++ MY RC E+++ F EM +++ ITWN +I G
Sbjct: 426 RLGMQMHQIVVKTVI-PDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGG 484
Query: 284 FETL-DSKESLCIFSLMVS 301
+ ++ E+L +F M S
Sbjct: 485 YAFHGNASEALNLFGSMKS 503
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 2/178 (1%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
++ Y G+++ A F++ + V+W ++I Y + A +F RM +G +P+
Sbjct: 349 MVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPD 408
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
TL+++L A GL L G H + VK + V NAL+ MY+ C + M+ R+
Sbjct: 409 PHTLTSLLSASTGLVNLRLGMQMHQIVVKTVI--PDVPVHNALITMYSRCGEIMESRRIF 466
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVG 222
E + + ++W +I GY G+A L +F M S +F ++ACA G
Sbjct: 467 DEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAG 524
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 133/304 (43%), Gaps = 54/304 (17%)
Query: 42 TTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRM-LRDG 100
T + G I EA +F+++ R+ V W MI+GY ++A K+F M RD
Sbjct: 43 TNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDV 102
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
V N T+ + +C G+R L E A L ++ +R S + N ++ YA +
Sbjct: 103 VTWN--TMISGYVSCGGIRFL---EEARKLFDEMPSRDSFSW--NTMISGYAKN-RRIGE 154
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEE---------GELSPFSF 211
A ++FE + +NAVSW+ +ITG+ G+ + +FR+M +++ G +
Sbjct: 155 ALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERL 214
Query: 212 SIAVSACASVGSGILGK------------------QLHAAVI-----------NHG---- 238
S A GS + G+ Q+ AA +HG
Sbjct: 215 SEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFR 274
Query: 239 --FQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLDSKE-SLCI 295
F N+ NS++ Y + A+ F +M +DTI+WNT+I G+ + E + +
Sbjct: 275 ERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFAL 334
Query: 296 FSLM 299
FS M
Sbjct: 335 FSEM 338
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 108/270 (40%), Gaps = 26/270 (9%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
+I Y I EA LF++M R+ V+W+AMITG+ A +F +M P
Sbjct: 142 MISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPL 201
Query: 105 AFTLSAVLKACKGLRALFC----GELAHG----------LAVKIGARGSSIYVDNALMDM 150
++ ++K + A + G L G L V G RG + L D
Sbjct: 202 CALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRG-QVEAARCLFDQ 260
Query: 151 YATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFS 210
C D F + KN VSW ++I Y GD +F QM + S
Sbjct: 261 IPDLCG--DDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQM----KDRDTIS 314
Query: 211 FSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT 270
++ + V L + + N S N ++ Y A+ +F +
Sbjct: 315 WNTMIDGYVHVSRMEDAFALFSEMPNRDAHS----WNMMVSGYASVGNVELARHYFEKTP 370
Query: 271 QKDTITWNTLIAGFE-TLDSKESLCIFSLM 299
+K T++WN++IA +E D KE++ +F M
Sbjct: 371 EKHTVSWNSIIAAYEKNKDYKEAVDLFIRM 400
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 121/276 (43%), Gaps = 37/276 (13%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGY---------------------- 80
T LI +Y G++ A +FDEM+ RDV W AMITGY
Sbjct: 121 TTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVT 180
Query: 81 ---------TSCNHHSRAWKVFPRMLRD-GVRPNAFTLSAVLKACKGLRALFCGELAHGL 130
+ ++S A K+F M +D V+PN T+ +VL AC L L G G
Sbjct: 181 SWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGY 240
Query: 131 AVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVT-KNAVSWTTLITGYTHRGDA 189
A + G +IYV NA ++MY+ C +D A+ +FE++ +N SW ++I G
Sbjct: 241 ARENGFF-DNIYVCNATIEMYSK-CGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKH 298
Query: 190 FGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVIN-HGFQSNLPVMNS 248
L +F QM+ E + +F + AC G + G++L ++ H L
Sbjct: 299 DEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGC 358
Query: 249 ILDMYCRCRCASEAKQFFCEMTQK-DTITWNTLIAG 283
++D+ R EA M K D + W TL+
Sbjct: 359 MIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGA 394
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 95/181 (52%), Gaps = 5/181 (2%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG-VRP 103
+I + + +A LFD M ++V++WT MITGY + A VF +MLRDG V+P
Sbjct: 270 MITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKP 329
Query: 104 NAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARM 163
N T ++L AC L L G+ H L K + + I V +AL++MY+ + + AR
Sbjct: 330 NVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEI-VTSALLNMYSKSGE-LIAARK 387
Query: 164 VFED--IVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASV 221
+F++ + ++ +SW ++I Y H G + ++ QM + S ++ + AC+
Sbjct: 388 MFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHA 447
Query: 222 G 222
G
Sbjct: 448 G 448
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 122/248 (49%), Gaps = 23/248 (9%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
++K+ +G I EA LF+ M RDVV+WTAM+ G A ++F M N
Sbjct: 177 MVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCM----PERN 232
Query: 105 AFTLSAVLKA-CKGLRALFCGELAHGLAVKIGARGSSI---YVDNALMDMYATCCDSMDR 160
+ +A++ + R +L + + A +++ ++ N M++
Sbjct: 233 IISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNR----------EMNK 282
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPF--SFSIAVSAC 218
A +F+ + KN +SWTT+ITGY + L VF +M L +G + P ++ +SAC
Sbjct: 283 ACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKM-LRDGSVKPNVGTYVSILSAC 341
Query: 219 ASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCE--MTQKDTIT 276
+ + + G+Q+H + Q N V +++L+MY + A++ F + Q+D I+
Sbjct: 342 SDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLIS 401
Query: 277 WNTLIAGF 284
WN++IA +
Sbjct: 402 WNSMIAVY 409
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 107/232 (46%), Gaps = 17/232 (7%)
Query: 53 GSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVL 112
G I EA LFD + RDVV WT +ITGY A ++F R+ R N T +A++
Sbjct: 60 GKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRV---DSRKNVVTWTAMV 116
Query: 113 KACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKN 172
+ L E+ L ++ R + N ++D YA +D+A +F+++ +N
Sbjct: 117 SGYLRSKQLSIAEM---LFQEMPERNVVSW--NTMIDGYAQ-SGRIDKALELFDEMPERN 170
Query: 173 AVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHA 232
VSW +++ RG + +F +M + S++ V A G ++L
Sbjct: 171 IVSWNSMVKALVQRGRIDEAMNLFERMPRRD----VVSWTAMVDGLAKNGKVDEARRLFD 226
Query: 233 AVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
+ + N+ N+++ Y + EA Q F M ++D +WNT+I GF
Sbjct: 227 CMP----ERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGF 274
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 98/197 (49%), Gaps = 10/197 (5%)
Query: 36 KDLTGLTTDLIKSYFDKGSIQEAHTLFDEMT-HRDVVAWTAMITGYTSCNHHSRAWKVFP 94
+DL L T +I Y G I EA +++ + H D V ++I+G ++ A+ +
Sbjct: 216 RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMS 275
Query: 95 RMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATC 154
R RPN LS+ L C L+ G+ H +A++ G S + N LMDMY C
Sbjct: 276 RQ-----RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDS-KLCNGLMDMYGKC 329
Query: 155 CDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFS--FS 212
+ +AR +F I +K+ VSWT++I Y GD L +FR+M E + P S F
Sbjct: 330 -GQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFL 388
Query: 213 IAVSACASVGSGILGKQ 229
+ +SACA G GK+
Sbjct: 389 VVISACAHAGLVKEGKE 405
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 125/261 (47%), Gaps = 14/261 (5%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
T LI Y G + ++ +F+ + +D+V+W A+++G+ A VF M R+ V
Sbjct: 123 TALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVE 182
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
+ FTLS+V+K C L+ L G+ H + V G + + A++ Y++ ++ A
Sbjct: 183 ISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGR--DLVVLGTAMISFYSS-VGLINEAM 239
Query: 163 MVFEDI-VTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPF--SFSIAVSACA 219
V+ + V + V +LI+G R +++ L P S +++ C+
Sbjct: 240 KVYNSLNVHTDEVMLNSLISGCIRN-------RNYKEAFLLMSRQRPNVRVLSSSLAGCS 292
Query: 220 SVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNT 279
+GKQ+H + +GF S+ + N ++DMY +C +A+ F + K ++W +
Sbjct: 293 DNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTS 352
Query: 280 LIAGFETL-DSKESLCIFSLM 299
+I + D ++L IF M
Sbjct: 353 MIDAYAVNGDGVKALEIFREM 373
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 129/269 (47%), Gaps = 8/269 (2%)
Query: 33 FRPKDLTGLTTDLI-KSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWK 91
R ++T +T+L+ + F + A LFDE+ RD+ + + ++ + + +
Sbjct: 11 IRLGNVTVKSTNLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLA 70
Query: 92 VFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMY 151
+F ++ R ++ T + VL AC L G H L +K GA +I AL+DMY
Sbjct: 71 LFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTIS-KTALIDMY 129
Query: 152 ATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSF 211
+ +D R VFE + K+ VSW L++G+ G L VF M E E+S F+
Sbjct: 130 SKYGHLVDSVR-VFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTL 188
Query: 212 SIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNS-ILDMYCRCRCASEAKQFFCEM- 269
S V CAS+ GKQ+HA V+ G +L V+ + ++ Y +EA + + +
Sbjct: 189 SSVVKTCASLKILQQGKQVHAMVVVTG--RDLVVLGTAMISFYSSVGLINEAMKVYNSLN 246
Query: 270 TQKDTITWNTLIAG-FETLDSKESLCIFS 297
D + N+LI+G + KE+ + S
Sbjct: 247 VHTDEVMLNSLISGCIRNRNYKEAFLLMS 275
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 73/137 (53%), Gaps = 1/137 (0%)
Query: 164 VFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGS 223
+F+++ ++ S + ++ + G+ L +F Q+ +LS +F+ + AC+ +
Sbjct: 40 LFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSY 99
Query: 224 GILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAG 283
G+Q+HA +I G ++ +++DMY + ++ + F + +KD ++WN L++G
Sbjct: 100 PETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSG 159
Query: 284 F-ETLDSKESLCIFSLM 299
F KE+L +F+ M
Sbjct: 160 FLRNGKGKEALGVFAAM 176
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 12/208 (5%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L L+ Y G I +A T+F + + VV+WT+MI Y +A ++F M +G
Sbjct: 318 LCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEG 377
Query: 101 --VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGAR---GSSIYVDNALMDMYATCC 155
V PN+ T V+ AC + G+ G+ +K R G+ YV +D+ +
Sbjct: 378 SGVLPNSVTFLVVISACAHAGLVKEGKECFGM-MKEKYRLVPGTEHYV--CFIDILSKAG 434
Query: 156 DSMDRARMVFEDIVTKNA----VSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSF 211
++ + R+V + N W +++ + D G V R+++ E G + +
Sbjct: 435 ETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIY 494
Query: 212 SIAVSACASVGSGILGKQLHAAVINHGF 239
+ + A++G + ++L + N G
Sbjct: 495 VLVSNFYAAMGKWDVVEELRGKLKNKGL 522
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 108/246 (43%), Gaps = 35/246 (14%)
Query: 39 TGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLR 98
+ L L+++Y + A +FDE+ R+V+ MI Y + + KVF M
Sbjct: 74 SSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCG 133
Query: 99 DGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSM 158
VRP+ +T VLKAC + G HG A K+G S+++V N L+ MY C +
Sbjct: 134 CNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGL-SSTLFVGNGLVSMYGK-CGFL 191
Query: 159 DRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSAC 218
AR+V +++ ++ VSW +L+ GY L V R+M S+ +S
Sbjct: 192 SEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREME-----------SVKISHD 240
Query: 219 ASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWN 278
A + +L AV N ++ + V K F +M +K ++WN
Sbjct: 241 AGTMASLL-----PAVSNTTTENVMYV-----------------KDMFFKMGKKSLVSWN 278
Query: 279 TLIAGF 284
+I +
Sbjct: 279 VMIGVY 284
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 115/227 (50%), Gaps = 8/227 (3%)
Query: 61 LFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRA 120
+F +M + +V+W MI Y A +++ RM DG P+A ++++VL AC A
Sbjct: 265 MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSA 324
Query: 121 LFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLI 180
L G+ HG ++ ++ ++NAL+DMYA C +++AR VFE++ +++ VSWT +I
Sbjct: 325 LSLGKKIHGY-IERKKLIPNLLLENALIDMYAK-CGCLEKARDVFENMKSRDVVSWTAMI 382
Query: 181 TGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAVSACASVGSGILGKQLHAAVINH- 237
+ Y G + +F + L++ L P +F ++AC+ G G+ + +H
Sbjct: 383 SAYGFSGRGCDAVALFSK--LQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHY 440
Query: 238 GFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT-QKDTITWNTLIAG 283
L + ++D+ R EA +F +M+ + + W L+
Sbjct: 441 KITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGA 487
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L LI Y G +++A +F+ M RDVV+WTAMI+ Y A +F ++ G
Sbjct: 346 LENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSG 405
Query: 101 VRPNAFTLSAVLKAC 115
+ P++ L AC
Sbjct: 406 LVPDSIAFVTTLAAC 420
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 104/194 (53%), Gaps = 2/194 (1%)
Query: 91 KVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDM 150
+ +M+ +RP+ L + K+C L G H L++K G + ++V ++L+DM
Sbjct: 102 EFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGY-DADVFVGSSLVDM 160
Query: 151 YATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFS 210
YA C + + AR +F+++ +N V+W+ ++ GY G+ L +F++ + E ++ +S
Sbjct: 161 YAKCGEIV-YARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYS 219
Query: 211 FSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT 270
FS +S CA+ LG+Q+H I F S+ V +S++ +Y +C A Q F E+
Sbjct: 220 FSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVP 279
Query: 271 QKDTITWNTLIAGF 284
K+ WN ++ +
Sbjct: 280 VKNLGIWNAMLKAY 293
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 3/240 (1%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
+ L+ Y G I A +FDEM R+VV W+ M+ GY + A +F L + +
Sbjct: 155 SSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLA 214
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
N ++ S+V+ C L G HGL++K SS ++L+ +Y+ C + A
Sbjct: 215 VNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVG-SSLVSLYSKC-GVPEGAY 272
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVG 222
VF ++ KN W ++ Y + +F++M L + + +F ++AC+ G
Sbjct: 273 QVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAG 332
Query: 223 SGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTIT-WNTLI 281
G+ + + S++DM R EA + M T + W L+
Sbjct: 333 LVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALL 392
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 95/181 (52%), Gaps = 7/181 (3%)
Query: 119 RALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTT 178
R+ G HG VK G + V N L++ Y+ D +R FED K++ +W++
Sbjct: 29 RSTIKGLQLHGYVVKSGLSLIPL-VANNLINFYSKSQLPFD-SRRAFEDSPQKSSTTWSS 86
Query: 179 LITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSI--AVSACASVGSGILGKQLHAAVIN 236
+I+ + + L ++M+ G L P + A +CA + +G+ +H +
Sbjct: 87 IISCFAQNELPWMSLEFLKKMM--AGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMK 144
Query: 237 HGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETL-DSKESLCI 295
G+ +++ V +S++DMY +C A++ F EM Q++ +TW+ ++ G+ + +++E+L +
Sbjct: 145 TGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWL 204
Query: 296 F 296
F
Sbjct: 205 F 205
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 132/281 (46%), Gaps = 7/281 (2%)
Query: 22 LHHRTQLNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYT 81
+H + + R +D + + LI Y A LFD M R+VV+W AM+ GY
Sbjct: 53 IHAHLIVTNQSSRAEDAYQINS-LINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQ 111
Query: 82 SCNHHSRAWKVFPRMLRDG-VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSS 140
+ K+F M G RPN F + V K+C + G+ HG +K G S
Sbjct: 112 NSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLI-SH 170
Query: 141 IYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMV 200
+V N L+ MY+ C + + R V +D+ + +++ ++GY G GL V R+
Sbjct: 171 EFVRNTLVYMYSLCSGNGEAIR-VLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTA 229
Query: 201 LEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCAS 260
E+ + ++ ++ +++ L Q+H+ ++ GF + + ++++MY +C
Sbjct: 230 NEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVL 289
Query: 261 EAKQFFCEMTQKDTITWNTLI--AGFETLDSKESLCIFSLM 299
A++ F + T I NT I A F+ +E+L +FS M
Sbjct: 290 YAQRVF-DDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKM 329
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 111/227 (48%), Gaps = 2/227 (0%)
Query: 57 EAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACK 116
EA + D++ + D+ +++ ++GY C V + + N T + L+
Sbjct: 189 EAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFS 248
Query: 117 GLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSW 176
LR L H V+ G + + AL++MY C + A+ VF+D +N
Sbjct: 249 NLRDLNLALQVHSRMVRFGF-NAEVEACGALINMYGKCGKVL-YAQRVFDDTHAQNIFLN 306
Query: 177 TTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVIN 236
TT++ Y L +F +M +E + ++F+I +++ A + G LH V+
Sbjct: 307 TTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLK 366
Query: 237 HGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAG 283
G+++++ V N++++MY + +A++ F MT +D +TWNT+I+G
Sbjct: 367 SGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISG 413
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 109/239 (45%), Gaps = 4/239 (1%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
LI Y G + A +FD+ +++ T ++ Y A +F +M V PN
Sbjct: 278 LINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPN 337
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
+T + +L + L L G+L HGL +K G R + + V NAL++MYA S++ AR
Sbjct: 338 EYTFAILLNSIAELSLLKQGDLLHGLVLKSGYR-NHVMVGNALVNMYAK-SGSIEDARKA 395
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
F + ++ V+W T+I+G +H G L F +M+ + +F + AC+ +G
Sbjct: 396 FSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFV 455
Query: 225 ILGKQLHAAVINH-GFQSNLPVMNSILDMYCRCRCASEAKQFF-CEMTQKDTITWNTLI 281
G ++ Q ++ I+ + + +A+ F + D + W TL+
Sbjct: 456 EQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLL 514
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 107/235 (45%), Gaps = 12/235 (5%)
Query: 53 GSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVL 112
G + A LF+ M RD +AW AMI+GY A VF M +GV+ N + +VL
Sbjct: 188 GDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVL 247
Query: 113 KACKGLRALFCGELAHGL----AVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDI 168
AC L AL G AH +KI R ++ L+D+YA C D M++A VF +
Sbjct: 248 SACTQLGALDQGRWAHSYIERNKIKITVRLAT-----TLVDLYAKCGD-MEKAMEVFWGM 301
Query: 169 VTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGK 228
KN +W++ + G G L +F M + + +F + C+ VG G+
Sbjct: 302 EEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQ 361
Query: 229 QLHAAVINH-GFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK-DTITWNTLI 281
+ ++ N G + L ++D+Y R +A +M K W++L+
Sbjct: 362 RHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 128/282 (45%), Gaps = 34/282 (12%)
Query: 51 DKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG--VRPNAFTL 108
D + A+ + D + A +MI + +++ + R+L G ++P+ +T+
Sbjct: 52 DHKYLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTV 111
Query: 109 SAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYAT--CCDSMDR------ 160
+ +++AC GLR G HG+ ++ G +V L+ +YA C DS +
Sbjct: 112 NFLVQACTGLRMRETGLQVHGMTIRRGFDNDP-HVQTGLISLYAELGCLDSCHKVFNSIP 170
Query: 161 ----------------------ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQ 198
AR +FE + ++ ++W +I+GY G++ L VF
Sbjct: 171 CPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHL 230
Query: 199 MVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRC 258
M LE +++ + +SAC +G+ G+ H+ + + + + + +++D+Y +C
Sbjct: 231 MQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGD 290
Query: 259 ASEAKQFFCEMTQKDTITWNTLIAGFETLDSKES-LCIFSLM 299
+A + F M +K+ TW++ + G E L +FSLM
Sbjct: 291 MEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLM 332
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 14/147 (9%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L T L+ Y G +++A +F M ++V W++ + G + ++F M +DG
Sbjct: 277 LATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDG 336
Query: 101 VRPNAFTLSAVLKAC-------KGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYAT 153
V PNA T +VL+ C +G R G+ ++ G L+D+YA
Sbjct: 337 VTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYG-------CLVDLYAR 389
Query: 154 CCDSMDRARMVFEDIVTKNAVSWTTLI 180
D ++ + + +A W++L+
Sbjct: 390 AGRLEDAVSIIQQMPMKPHAAVWSSLL 416
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 124/263 (47%), Gaps = 4/263 (1%)
Query: 39 TGLTTDLIKSYFDKGSIQEAHTLFDEMTHR-DVVAWTAMITGYTSCNHHSRAWKVFPRML 97
T L LI Y G I +A +FDEM D V ++ ++ GY + + A +F M
Sbjct: 160 TDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMR 219
Query: 98 RDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDS 157
+ V N TL + L A L L E AH L +KIG +++ AL+ MY
Sbjct: 220 KSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGL-DLDLHLITALIGMYGKT-GG 277
Query: 158 MDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSA 217
+ AR +F+ + K+ V+W +I Y G + + RQM E+ + + +F +S+
Sbjct: 278 ISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSS 337
Query: 218 CASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITW 277
CA + +G+ + + + + +++DMY + +A + F M KD +W
Sbjct: 338 CAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSW 397
Query: 278 NTLIAGFETLD-SKESLCIFSLM 299
+I+G+ ++E++ +F+ M
Sbjct: 398 TAMISGYGAHGLAREAVTLFNKM 420
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 117/230 (50%), Gaps = 7/230 (3%)
Query: 55 IQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKA 114
I+ A ++F+ +++ ++ + MI GY+ + RA+ VF ++ G+ + F+ LK+
Sbjct: 75 IRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKS 134
Query: 115 CKGLRALFCGELAHGLAVKIGARGSSIYVD--NALMDMYATCCDSMDRARMVFEDI-VTK 171
C + GE HG+A++ G ++ D NAL+ Y C D AR VF+++ +
Sbjct: 135 CSRELCVSIGEGLHGIALR---SGFMVFTDLRNALIHFYCVCGKISD-ARKVFDEMPQSV 190
Query: 172 NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLH 231
+AV+++TL+ GY L +FR M E ++ + +SA + +G + H
Sbjct: 191 DAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAH 250
Query: 232 AAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLI 281
I G +L ++ +++ MY + S A++ F +KD +TWN +I
Sbjct: 251 VLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMI 300
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 108/247 (43%), Gaps = 6/247 (2%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L T LI Y G I A +FD +DVV W MI Y + +M +
Sbjct: 264 LITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEK 323
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
++PN+ T +L +C A F G L + +I + AL+DMYA +++
Sbjct: 324 MKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAI-LGTALVDMYAK-VGLLEK 381
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAVSAC 218
A +F + K+ SWT +I+GY G A + +F +M E ++ P +F + ++AC
Sbjct: 382 AVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNAC 441
Query: 219 ASVGSGILGKQLHAAVIN-HGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM-TQKDTIT 276
+ G + G + ++ + F + ++D+ R EA + + D+
Sbjct: 442 SHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTA 501
Query: 277 WNTLIAG 283
W L+A
Sbjct: 502 WRALLAA 508
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 82/174 (47%), Gaps = 5/174 (2%)
Query: 128 HGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRG 187
HG VK G V L +++ D + A +FE + N + T+I GY+
Sbjct: 48 HGYMVKTGLDKDDFAVSKLLA--FSSVLD-IRYASSIFEHVSNTNLFMFNTMIRGYSISD 104
Query: 188 DAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMN 247
+ VF Q+ + L FSF + +C+ +G+ LH + GF + N
Sbjct: 105 EPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRN 164
Query: 248 SILDMYCRCRCASEAKQFFCEMTQK-DTITWNTLIAGFETLDSKE-SLCIFSLM 299
+++ YC C S+A++ F EM Q D +T++TL+ G+ + K +L +F +M
Sbjct: 165 ALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIM 218
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 6/215 (2%)
Query: 74 TAMITGYTSCNHHSRAWKVFPRMLRDGVRP-NAFTLSAVLKACKGLRALFCGELAHGLAV 132
MI ++ +++F + R+ P N + S LK C L G HG
Sbjct: 81 NTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIF 140
Query: 133 KIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGG 192
G S+ + LMD+Y+TC +S D + VF++I ++ VSW L + Y
Sbjct: 141 SDGFLSDSLLM-TTLMDLYSTCENSTDACK-VFDEIPKRDTVSWNVLFSCYLRNKRTRDV 198
Query: 193 LRVFRQMVLE-EGELSPFSFS--IAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSI 249
L +F +M + +G + P + +A+ ACA++G+ GKQ+H + +G L + N++
Sbjct: 199 LVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTL 258
Query: 250 LDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
+ MY RC +A Q F M +++ ++W LI+G
Sbjct: 259 VSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGL 293
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 113/251 (45%), Gaps = 12/251 (4%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRD- 99
L T L+ Y + +A +FDE+ RD V+W + + Y +F +M D
Sbjct: 150 LMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDV 209
Query: 100 --GVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDS 157
V+P+ T L+AC L AL G+ H + G G ++ + N L+ MY+ C S
Sbjct: 210 DGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSG-ALNLSNTLVSMYSR-CGS 267
Query: 158 MDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA--V 215
MD+A VF + +N VSWT LI+G G + F +M+ + +SP ++ +
Sbjct: 268 MDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEML--KFGISPEEQTLTGLL 325
Query: 216 SACASVGSGILGKQLHAAVINHGF--QSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK- 272
SAC+ G G + + F + NL ++D+ R R +A M K
Sbjct: 326 SACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKP 385
Query: 273 DTITWNTLIAG 283
D+ W TL+
Sbjct: 386 DSTIWRTLLGA 396
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 68/138 (49%), Gaps = 2/138 (1%)
Query: 164 VFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEG-ELSPFSFSIAVSACASVG 222
VF + T+I ++ G R+FR + +P S S A+ C G
Sbjct: 68 VFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSG 127
Query: 223 SGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIA 282
+ G Q+H + + GF S+ +M +++D+Y C +++A + F E+ ++DT++WN L +
Sbjct: 128 DLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFS 187
Query: 283 GF-ETLDSKESLCIFSLM 299
+ +++ L +F M
Sbjct: 188 CYLRNKRTRDVLVLFDKM 205
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 13/172 (7%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L+ L+ Y GS+ +A+ +F M R+VV+WTA+I+G A + F ML+ G
Sbjct: 254 LSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFG 313
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
+ P TL+ +L AC G +A G+ R + L Y D + R
Sbjct: 314 ISPEEQTLTGLLSACS-----HSGLVAEGMMFFDRMRSGEFKIKPNL-HHYGCVVDLLGR 367
Query: 161 ARMVFEDI-------VTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGE 205
AR++ + + ++ W TL+ GD G RV ++ + E
Sbjct: 368 ARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAE 419
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 109/249 (43%), Gaps = 14/249 (5%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
+I + + G I +A +FD M RD W MI Y A +F +M + GVRP+
Sbjct: 271 MIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPS 330
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
+L ++L C L +L G H V+ +YV + LM MY C + + +A++V
Sbjct: 331 FPSLISILSVCATLASLQYGRQVHAHLVRC-QFDDDVYVASVLMTMYVKCGE-LVKAKLV 388
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
F+ +K+ + W ++I+GY G L++F +M + + ++AC+
Sbjct: 389 FDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYA--- 445
Query: 225 ILGKQLHAAVINHGFQSNLPVMNSI------LDMYCRCRCASEAKQFFCEMTQK-DTITW 277
GK I +S V ++ +DM R +A + MT K D W
Sbjct: 446 --GKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVW 503
Query: 278 NTLIAGFET 286
L+ +T
Sbjct: 504 GALLGACKT 512
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 132/328 (40%), Gaps = 70/328 (21%)
Query: 3 NAARKFLPRIDFRPAPSVVLHHRTQLNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLF 62
N ARKF + F+ G ++ YF G +EA LF
Sbjct: 34 NEARKFFDSLQFKA----------------------IGSWNSIVSGYFSNGLPKEARQLF 71
Query: 63 DEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALF 122
DEM+ R+VV+W +++GY A VF M N + +A++K ++
Sbjct: 72 DEMSERNVVSWNGLVSGYIKNRMIVEARNVFELM----PERNVVSWTAMVKGY--MQEGM 125
Query: 123 CGELAHGLAVKIGARGSSIY-------VDNALMDMYATCCDSM----------------- 158
GE A L ++ R + +D+ +D D M
Sbjct: 126 VGE-AESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCR 184
Query: 159 ----DRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA 214
D AR++F+++ +N V+WTT+ITGY ++F +++ E+ E+S S +
Sbjct: 185 EGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLF-EVMPEKTEVSWTSMLLG 243
Query: 215 VSACASVGSGILGKQLHAAVINHGFQSNLPVM--NSILDMYCRCRCASEAKQFFCEMTQK 272
+ L ++ A PV+ N+++ + S+A++ F M +
Sbjct: 244 YT---------LSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDR 294
Query: 273 DTITWNTLIAGFETLDSK-ESLCIFSLM 299
D TW +I +E + E+L +F+ M
Sbjct: 295 DNATWRGMIKAYERKGFELEALDLFAQM 322
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 128/281 (45%), Gaps = 35/281 (12%)
Query: 53 GSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVL 112
G + A+ +++ W +I G+++ + ++ V+ +MLR G+ P+ T ++
Sbjct: 56 GDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLM 115
Query: 113 KACKGLRALFCGELAHGLAVKIGAR-------------GS-----------------SIY 142
K+ L G H VK G GS ++
Sbjct: 116 KSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLV 175
Query: 143 VDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMV-L 201
N+++D YA D + AR+VF+++ ++ V+W+++I GY RG+ L +F QM+ +
Sbjct: 176 TWNSILDAYAKSGDVVS-ARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRM 234
Query: 202 EEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASE 261
+ + + + ACA +G+ GK +H +++ + + S++DMY +C +
Sbjct: 235 GSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGD 294
Query: 262 AKQFFCEMTQKDT--ITWNTLIAGFETLD-SKESLCIFSLM 299
A F + K+T + WN +I G + +ESL +F M
Sbjct: 295 AWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKM 335
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 111/234 (47%), Gaps = 7/234 (2%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG-VRP 103
++ +Y G + A +FDEM+ RDVV W++MI GY +++A ++F +M+R G +
Sbjct: 180 ILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKA 239
Query: 104 NAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARM 163
N T+ +V+ AC L AL G+ H + + + I + +L+DMYA C D +
Sbjct: 240 NEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVI-LQTSLIDMYAKCGSIGDAWSV 298
Query: 164 VFEDIVTK-NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAVSACAS 220
+ V + +A+ W +I G G L++F +M E ++ P +F ++AC+
Sbjct: 299 FYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKM--RESKIDPDEITFLCLLAACSH 356
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDT 274
G ++ G + ++D+ R +A F EM K T
Sbjct: 357 GGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPT 410
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 77/171 (45%), Gaps = 5/171 (2%)
Query: 115 CKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAV 174
CK + L+ H L + +G +V L + +D A +
Sbjct: 18 CKSMSELY---KIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNY 74
Query: 175 SWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP-FSFSIAVSACASVGSGILGKQLHAA 233
W +I G+++ + + V+ QM L G L ++ + + + + + LG LH +
Sbjct: 75 GWNFVIRGFSNSRNPEKSISVYIQM-LRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCS 133
Query: 234 VINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
V+ G + +L + N+++ MY R + A++ F EM K+ +TWN+++ +
Sbjct: 134 VVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAY 184
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 134/321 (41%), Gaps = 67/321 (20%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
++ Y + +A LFD M R V++T +I GY N S A ++F M G+ N
Sbjct: 113 MVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLN 172
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV 164
TL+ V+ AC L ++ + LA+K+ G ++V L+ MY C + AR +
Sbjct: 173 EVTLATVISACSHLGGIWDCRMLQSLAIKLKLEG-RVFVSTNLLHMYCLCL-CLKDARKL 230
Query: 165 FEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMV--------------LEEGEL---- 206
F+++ +N V+W ++ GY+ G +F Q+ L + +L
Sbjct: 231 FDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEAL 290
Query: 207 -------------SPFSFSIAVSACA-SVGSGILGKQLHAAVINHGF------------- 239
S +SA A SVGS G QLH ++ GF
Sbjct: 291 VYYTEMLRCGMKPSEVMMVDLLSASARSVGSS-KGLQLHGTIVKRGFDCYDFLQATIIHF 349
Query: 240 ------------------QSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLI 281
+ ++ N+++ + + +A++ F + KD +WN +I
Sbjct: 350 YAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMI 409
Query: 282 AGF-ETLDSKESLCIFSLMVS 301
+G+ ++L + +L +F M+S
Sbjct: 410 SGYAQSLSPQLALHLFREMIS 430
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 117/278 (42%), Gaps = 39/278 (14%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
++ Y G I++A LFD++T +D+V+W MI G N A + MLR G++P+
Sbjct: 245 MLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPS 304
Query: 105 AFTLSAVLKA-------CKGL--------RALFCGELAHGLAVKIGARGSSIYVDNALMD 149
+ +L A KGL R C + + A + I + AL
Sbjct: 305 EVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKL--ALQQ 362
Query: 150 MYATCCDSM----------------DRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGL 193
A+ D + ++AR VF+ K+ SW +I+GY L
Sbjct: 363 FEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLAL 422
Query: 194 RVFRQMVLEEGELSPFSFSI--AVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILD 251
+FR+M+ ++ P + ++ SA +S+GS GK+ H + N + +I+D
Sbjct: 423 HLFREMI-SSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIID 481
Query: 252 MYCRCRCASEAKQFFCEMTQKDTIT---WNTLIAGFET 286
MY +C A F + + T WN +I G T
Sbjct: 482 MYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSAT 519
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 117/257 (45%), Gaps = 8/257 (3%)
Query: 36 KDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPR 95
KD LI + G +++A +FD+ +D+ +W AMI+GY A +F
Sbjct: 368 KDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFRE 427
Query: 96 MLRDG-VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATC 154
M+ V+P+A T+ +V A L +L G+ AH + + + A++DMYA
Sbjct: 428 MISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDY-LNFSTIPPNDNLTAAIIDMYAK- 485
Query: 155 CDSMDRARMVF---EDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSF 211
C S++ A +F ++I + W +I G G A L ++ + + + +F
Sbjct: 486 CGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITF 545
Query: 212 SIAVSACASVGSGILGKQLHAAVI-NHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT 270
+SAC G LGK ++ +HG + ++ ++D+ + EAK+ +M
Sbjct: 546 VGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMP 605
Query: 271 QK-DTITWNTLIAGFET 286
K D + W L++ T
Sbjct: 606 VKADVMIWGMLLSASRT 622
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 31/207 (14%)
Query: 108 LSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATC------------- 154
L + L +C + CG H +K G S+ Y+ N++++MYA C
Sbjct: 44 LVSALGSCASSNDVTCGRQIHCRVLKSGL-DSNGYICNSVLNMYAKCRLLADAESVFRDH 102
Query: 155 -----------CDSMDRAR------MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFR 197
D R+R +F+ + ++ VS+TTLI GY + +FR
Sbjct: 103 AKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFR 162
Query: 198 QMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCR 257
+M L+ + + +SAC+ +G + L + I + + V ++L MYC C
Sbjct: 163 EMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCL 222
Query: 258 CASEAKQFFCEMTQKDTITWNTLIAGF 284
C +A++ F EM +++ +TWN ++ G+
Sbjct: 223 CLKDARKLFDEMPERNLVTWNVMLNGY 249
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 89/181 (49%), Gaps = 7/181 (3%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
T +I Y G + A LF+E DV AW+A+I GY + A+KVF M V+
Sbjct: 242 TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVK 301
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARG---SSIYVDNALMDMYATCCDSMD 159
P+ F + ++ AC + C EL + + R SS YV AL+DM A C MD
Sbjct: 302 PDEFIMVGLMSACS---QMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAK-CGHMD 357
Query: 160 RARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACA 219
RA +FE++ ++ VS+ +++ G G +R+F +MV E +F++ + C
Sbjct: 358 RAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCG 417
Query: 220 S 220
Sbjct: 418 Q 418
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 12/241 (4%)
Query: 61 LFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGV-RPNAFTLSAVLKACKGLR 119
+F+ + W +I GY++ + RM+R G+ RP+ +T V+K C
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 120 ALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTL 179
+ G HGL ++IG + V + +D Y C D + AR VF ++ +NAVSWT L
Sbjct: 125 QVRVGSSVHGLVLRIGF-DKDVVVGTSFVDFYGKCKD-LFSARKVFGEMPERNAVSWTAL 182
Query: 180 ITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGF 239
+ Y G+ +F M E + S++ V G + K+L +
Sbjct: 183 VVAYVKSGELEEAKSMFDLM----PERNLGSWNALVDGLVKSGDLVNAKKL----FDEMP 234
Query: 240 QSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF-ETLDSKESLCIFSL 298
+ ++ S++D Y + A+ F E D W+ LI G+ + E+ +FS
Sbjct: 235 KRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSE 294
Query: 299 M 299
M
Sbjct: 295 M 295
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 110/246 (44%), Gaps = 14/246 (5%)
Query: 58 AHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKG 117
A +F EM R+ V+WTA++ Y A +F M + + ++K+
Sbjct: 164 ARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKS--- 220
Query: 118 LRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWT 177
G+L + + I +++D YA D M AR +FE+ + +W+
Sbjct: 221 ------GDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGD-MVSARDLFEEARGVDVRAWS 273
Query: 178 TLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVIN- 236
LI GY G +VF +M + + F +SAC+ +G L +++ + +
Sbjct: 274 ALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQR 333
Query: 237 -HGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLD-SKESLC 294
+ F S+ V+ +++DM +C A + F EM Q+D +++ +++ G E++
Sbjct: 334 MNKFSSHY-VVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIR 392
Query: 295 IFSLMV 300
+F MV
Sbjct: 393 LFEKMV 398
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 110/250 (44%), Gaps = 11/250 (4%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTS----CNHHSRAWKVFPRM 96
+ T L+ Y G ++ A +FDEM R V W AMI GY S NH++R V R
Sbjct: 149 IGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRR 208
Query: 97 LR---DGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGS-SIYVDNALMDMYA 152
GVRP T+ VL A L G L HG K+G +++ AL+DMY+
Sbjct: 209 FSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYS 268
Query: 153 TCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFS 212
C ++ A VFE + KN +WT++ TG G + +M + + +F+
Sbjct: 269 K-CGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFT 327
Query: 213 IAVSACASVGSGILGKQLHAAV-INHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQ 271
+SA +G G +L ++ G + I+D+ + EA QF M
Sbjct: 328 SLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPI 387
Query: 272 K-DTITWNTL 280
K D I +L
Sbjct: 388 KPDAILLRSL 397
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 10/173 (5%)
Query: 121 LFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLI 180
L G + HG+ K+G S + L+ YA D + AR VF+++ + +V+W +I
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGD-LRYARKVFDEMPERTSVTWNAMI 185
Query: 181 TGYTHRGD-----AFGGLRVFRQMVLEEGELSPFSFSIA--VSACASVGSGILGKQLHAA 233
GY D A + +FR+ + P ++ +SA + G +G +H
Sbjct: 186 GGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGY 245
Query: 234 VINHGFQSNLPVM--NSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
+ GF + V +++DMY +C C + A F M K+ TW ++ G
Sbjct: 246 IEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGL 298
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 110/250 (44%), Gaps = 5/250 (2%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLR-DGVRP 103
+I+S G A + + ++V+ W MI GY + A K ML ++P
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 104 NAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARM 163
N F+ ++ L AC L L + H L + G ++I + +AL+D+YA C D + +R
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAI-LSSALVDVYAKCGD-IGTSRE 221
Query: 164 VFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGS 223
VF + + W +ITG+ G A +RVF +M E +F ++ C+ G
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGL 281
Query: 224 GILGKQLHAAVINH-GFQSNLPVMNSILDMYCRCRCASEAKQFFCEM-TQKDTITWNTLI 281
GK+ + Q L +++D+ R EA + M + D + W +L+
Sbjct: 282 LEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Query: 282 AGFETLDSKE 291
+ T + E
Sbjct: 342 SSSRTYKNPE 351
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 75/142 (52%), Gaps = 4/142 (2%)
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAVSAC 218
A+ V + +N ++W +I GY L+ + M L ++ P FSF+ +++AC
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNM-LSFTDIKPNKFSFASSLAAC 175
Query: 219 ASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWN 278
A +G K +H+ +I+ G + N + ++++D+Y +C +++ F + + D WN
Sbjct: 176 ARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWN 235
Query: 279 TLIAGFETLD-SKESLCIFSLM 299
+I GF T + E++ +FS M
Sbjct: 236 AMITGFATHGLATEAIRVFSEM 257
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 4/216 (1%)
Query: 69 DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAH 128
DVV+WT++I+G + +A+ F +ML G+ PN+ T+ +L AC L + G+ H
Sbjct: 252 DVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIH 311
Query: 129 GLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGD 188
G +V G +V +AL+DMY C + A ++F K V++ ++I Y + G
Sbjct: 312 GYSVVTGLEDHG-FVRSALLDMYGK-CGFISEAMILFRKTPKKTTVTFNSMIFCYANHGL 369
Query: 189 AFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVIN-HGFQSNLPVMN 247
A + +F QM +L +F+ ++AC+ G LG+ L + N + L
Sbjct: 370 ADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYA 429
Query: 248 SILDMYCRCRCASEAKQFFCEM-TQKDTITWNTLIA 282
++D+ R EA + M + D W L+A
Sbjct: 430 CMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLA 465
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 84/164 (51%), Gaps = 2/164 (1%)
Query: 38 LTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRML 97
LT + L+ Y + G + +A +FDEM RD+ MI ++ + F M
Sbjct: 50 LTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMY 109
Query: 98 RDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDS 157
+DG++ +AF + ++LKA + L G++ H L +K S ++ ++L+DMY+ +
Sbjct: 110 KDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYE-SDAFIVSSLIDMYSKFGE- 167
Query: 158 MDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVL 201
+ AR VF D+ ++ V + +I+GY + A L + + M L
Sbjct: 168 VGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKL 211
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 90/191 (47%), Gaps = 10/191 (5%)
Query: 101 VRPNAFTLSAV-----LKACKGLRALFC-GELAHGLAVKIG-ARGSSIYVDNALMDMYAT 153
+ P++F L ++ L G LFC G + H V G AR + I L+ Y
Sbjct: 6 IVPSSFRLLSIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAK--LVTFYVE 63
Query: 154 CCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSI 213
C +D AR VF+++ ++ +I G L FR+M + +L F
Sbjct: 64 CGKVLD-ARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPS 122
Query: 214 AVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKD 273
+ A ++ GK +H V+ ++S+ +++S++DMY + A++ F ++ ++D
Sbjct: 123 LLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQD 182
Query: 274 TITWNTLIAGF 284
+ +N +I+G+
Sbjct: 183 LVVFNAMISGY 193
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 121/280 (43%), Gaps = 40/280 (14%)
Query: 54 SIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLK 113
S+ A+ LFDEM RD +AW ++ + +A ++F M G + T+ +L+
Sbjct: 38 SLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQ 97
Query: 114 ACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKN- 172
C G HG +++G S++ + N+L+ MY+ ++ +R VF + +N
Sbjct: 98 VCSNKEGFAEGRQIHGYVLRLGLE-SNVSMCNSLIVMYSRN-GKLELSRKVFNSMKDRNL 155
Query: 173 ----------------------------------AVSWTTLITGYTHRGDAFGGLRVFRQ 198
V+W +L++GY +G + + V ++
Sbjct: 156 SSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKR 215
Query: 199 MVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRC 258
M + + S S S + A A G LGK +H ++ + ++ V +++DMY +
Sbjct: 216 MQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGY 275
Query: 259 ASEAKQFFCEMTQKDTITWNTLIAGFE---TLDSKESLCI 295
A+ F M K+ + WN+L++G L E+L I
Sbjct: 276 LPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMI 315
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 113/262 (43%), Gaps = 10/262 (3%)
Query: 27 QLNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTS 82
++ +P +T L Y G ++A + +M + +VV+WTA+ +G +
Sbjct: 316 RMEKEGIKPDAIT--WNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSK 373
Query: 83 CNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIY 142
+ A KVF +M +GV PNA T+S +LK L L G+ HG ++ + Y
Sbjct: 374 NGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDA-Y 432
Query: 143 VDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLE 202
V AL+DMY D + A +F I K+ SW ++ GY G G+ F M+
Sbjct: 433 VATALVDMYGKSGD-LQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEA 491
Query: 203 EGELSPFSFSIAVSACASVGSGILG-KQLHAAVINHGFQSNLPVMNSILDMYCRCRCASE 261
E +F+ +S C + G G K +G + + ++D+ R E
Sbjct: 492 GMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDE 551
Query: 262 AKQFFCEMTQK-DTITWNTLIA 282
A F M+ K D W ++
Sbjct: 552 AWDFIQTMSLKPDATIWGAFLS 573
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 111/267 (41%), Gaps = 46/267 (17%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
+ T LI Y G + A +FD M +++VAW ++++G + A + RM ++G
Sbjct: 262 VETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEG 321
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCD---S 157
++P+A T N+L YAT +
Sbjct: 322 IKPDAITW------------------------------------NSLASGYATLGKPEKA 345
Query: 158 MDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEG---ELSPFSFSIA 214
+D + E V N VSWT + +G + G+ L+VF +M EEG + S +
Sbjct: 346 LDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQ-EEGVGPNAATMSTLLK 404
Query: 215 VSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDT 274
+ C S+ GK++H + + V +++DMY + A + F + K
Sbjct: 405 ILGCLSLLHS--GKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSL 462
Query: 275 ITWNTLIAGFETLD-SKESLCIFSLMV 300
+WN ++ G+ +E + FS+M+
Sbjct: 463 ASWNCMLMGYAMFGRGEEGIAAFSVML 489
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 76/145 (52%), Gaps = 6/145 (4%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMT----HRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
++ SY G + +A L DEM D+V W ++++GY S A V RM G
Sbjct: 161 ILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAG 220
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
++P+ ++S++L+A L G+ HG ++ +YV+ L+DMY +
Sbjct: 221 LKPSTSSISSLLQAVAEPGHLKLGKAIHGYILR-NQLWYDVYVETTLIDMYIKT-GYLPY 278
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTH 185
ARMVF+ + KN V+W +L++G ++
Sbjct: 279 ARMVFDMMDAKNIVAWNSLVSGLSY 303
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 79/166 (47%), Gaps = 1/166 (0%)
Query: 122 FCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLIT 181
F G HG +K G S V +A M Y C S+ A +F+++ ++ ++W ++
Sbjct: 4 FLGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCV-SLGFANKLFDEMPKRDDLAWNEIVM 62
Query: 182 GYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQS 241
G+ + +FR+M + + + C++ G+Q+H V+ G +S
Sbjct: 63 VNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLES 122
Query: 242 NLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETL 287
N+ + NS++ MY R +++ F M ++ +WN++++ + L
Sbjct: 123 NVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKL 168
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 109/246 (44%), Gaps = 17/246 (6%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG-VRP 103
+I Y G + A TLFD+M HRDVVA+ +M+ GY +H A ++F M ++ + P
Sbjct: 289 MIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLP 348
Query: 104 NAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDN----ALMDMYATCCDSMD 159
+ TL VL A L G L+ + + + Y+ AL+DMY+ C S+
Sbjct: 349 DDTTLVIVLPAIAQL-----GRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSK-CGSIQ 402
Query: 160 RARMVFEDIVTKNAVSWTTLITGYTHRG---DAFGGLRVFRQMVLEEGELSPFSFSIAVS 216
A +VFE I K+ W +I G G AF L ++ L+ +++ A S
Sbjct: 403 HAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACS 462
Query: 217 ACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM-TQKDTI 275
V G+L +L H + L ++D+ R AK EM + + +
Sbjct: 463 HSGLVKEGLLCFELMRR--KHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDV 520
Query: 276 TWNTLI 281
W T +
Sbjct: 521 IWRTFL 526
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 107/221 (48%), Gaps = 9/221 (4%)
Query: 68 RDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELA 127
D W A+I ++ +A + ML +GV + F+LS VLKAC L + G
Sbjct: 84 EDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQI 143
Query: 128 HGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRG 187
HG K G S +++ N L+ +Y C + +R +F+ + +++VS+ ++I GY G
Sbjct: 144 HGFLKKTGL-WSDLFLQNCLIGLYLK-CGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCG 201
Query: 188 DAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGI-LGKQLHAAVINHGFQSNLPVM 246
+F M +E L S++ +S A G+ + +L A + + +L
Sbjct: 202 LIVSARELFDLMPMEMKNL--ISWNSMISGYAQTSDGVDIASKLFADMP----EKDLISW 255
Query: 247 NSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETL 287
NS++D Y + +AK F M ++D +TW T+I G+ L
Sbjct: 256 NSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKL 296
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 119/291 (40%), Gaps = 39/291 (13%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVR 102
+ LI Y G + A +FDEM R+V W AMI GY S A +F + V
Sbjct: 85 SSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEI---SVC 141
Query: 103 PNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
N T ++ KG E A L ++ ++ + ++ +Y M+ AR
Sbjct: 142 RNTVTW---IEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNN-RKMEDAR 197
Query: 163 MVFEDIVTKNA-------------------------------VSWTTLITGYTHRGDAFG 191
FEDI KNA V W TLI GY G +
Sbjct: 198 KFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDD 257
Query: 192 GLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILD 251
+ F M E E + S +SACA G +G+++H+ + + G + N V N+++D
Sbjct: 258 AIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALID 317
Query: 252 MYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETL-DSKESLCIFSLMVS 301
MY +C A F ++ + N++I+ KE+L +FS M S
Sbjct: 318 MYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMES 368
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 81/192 (42%), Gaps = 41/192 (21%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
++ YF G + EA +F + RD+V W +I GY + A F M +G P+
Sbjct: 214 MMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPD 273
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSI--YVDNALMDMYATCCDSMDRAR 162
A T+S++L AC L G H L I RG + +V NAL+DMYA C D ++ A
Sbjct: 274 AVTVSSILSACAQSGRLDVGREVHSL---INHRGIELNQFVSNALIDMYAKCGD-LENAT 329
Query: 163 MVFEDIVTK-----------------------------------NAVSWTTLITGYTHRG 187
VFE I + + +++ ++T H G
Sbjct: 330 SVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGG 389
Query: 188 DAFGGLRVFRQM 199
GL++F +M
Sbjct: 390 FLMEGLKIFSEM 401
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 35/230 (15%)
Query: 84 NHHSRAWKVFPRMLRDGVRPNAFTLSA----VLKACKGLRA-LFCGELAHGLAVKIGARG 138
NH SR + +L G+R +L+AC + + G+L H ++K G
Sbjct: 20 NHISRGSPIQALVLYGGIRRRGVYFPGWVPLILRACACVVPRVVLGKLLHSESIKFGV-C 78
Query: 139 SSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQ 198
S + V ++L+ MY C + AR VF+++ +N +W +I GY GDA V
Sbjct: 79 SDVMVGSSLISMYGKC-GCVVSARKVFDEMPERNVATWNAMIGGYMSNGDA-----VLAS 132
Query: 199 MVLEEGELSPFSFSIAVSACASVGSGI-----LGKQLHAAVINHGFQ------SNLPVMN 247
+ EE +S C + + I GK++ F+ N+ +
Sbjct: 133 GLFEE-----------ISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWS 181
Query: 248 SILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAG-FETLDSKESLCIF 296
+L +Y R +A++FF ++ +K+ W+ +++G F D E+ IF
Sbjct: 182 VMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIF 231
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 2/123 (1%)
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASV- 221
M E+ ++ + LI + RG L V + G P + + ACA V
Sbjct: 1 MNLEEHLSLGEFHVSNLIKNHISRGSPIQAL-VLYGGIRRRGVYFPGWVPLILRACACVV 59
Query: 222 GSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLI 281
+LGK LH+ I G S++ V +S++ MY +C C A++ F EM +++ TWN +I
Sbjct: 60 PRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMI 119
Query: 282 AGF 284
G+
Sbjct: 120 GGY 122
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 116/240 (48%), Gaps = 19/240 (7%)
Query: 58 AHTLFDEMTHRDVVAWTAMITGYTSCNHHSR----AWKVFPRMLR---DGVRPNAFTLSA 110
A ++ ++ + V + +I+ S NH+S A+ ++ ++L + VRPN FT +
Sbjct: 59 ALSILRQIPNPSVFLYNTLISSIVS-NHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPS 117
Query: 111 VLKACKGLRALFC--GELAHGLAVK-IGARGSSIYVDNALMDMYATCCDSMDRARMVFED 167
+ KA G A + G H +K + +V AL+ YA C + AR +FE
Sbjct: 118 LFKA-SGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANC-GKLREARSLFER 175
Query: 168 IVTKNAVSWTTLITGYTHRGDAFGG---LRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
I + +W TL+ Y + + L +F +M + ELS + + +CA++G
Sbjct: 176 IREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVAL---IKSCANLGEF 232
Query: 225 ILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
+ G H V+ + N V S++D+Y +C C S A++ F EM+Q+D +N +I G
Sbjct: 233 VRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGL 292
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 114/245 (46%), Gaps = 6/245 (2%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
L+ Y + G ++EA +LF+ + D+ W ++ Y + +V +R VRPN
Sbjct: 156 LVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPN 215
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATC-CDSMDRARM 163
+L A++K+C L G AH +K + +V +L+D+Y+ C C S AR
Sbjct: 216 ELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQ-FVGTSLIDLYSKCGCLSF--ARK 272
Query: 164 VFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGS 223
VF+++ ++ + +I G G G+ +++ ++ + +F + +SAC+ G
Sbjct: 273 VFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGL 332
Query: 224 GILGKQLHAAVIN-HGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTIT-WNTLI 281
G Q+ ++ +G + + ++D+ R EA++ +M K T W + +
Sbjct: 333 VDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFL 392
Query: 282 AGFET 286
+T
Sbjct: 393 GSSQT 397
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 119/277 (42%), Gaps = 45/277 (16%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRM-LRD 99
+ T L+ Y G I+ A FD++ ++ V+W +++ GY A +VF ++ +D
Sbjct: 141 VQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKD 200
Query: 100 GVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD 159
V N S K G++ + ++ S N L+ Y C + M
Sbjct: 201 AVSWNLIISSYAKK----------GDMGNACSLFSAMPLKSPASWNILIGGYVNCRE-MK 249
Query: 160 RARMVFEDIVTKNAVSWTTLITGYTHRGDAFGG--------------------------- 192
AR F+ + KN VSW T+I+GYT GD
Sbjct: 250 LARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGK 309
Query: 193 ----LRVFRQMVLEEGELSP--FSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVM 246
L++F QM+ + P + S VSA + +G+ G + + + HG + + +
Sbjct: 310 PKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLS 369
Query: 247 NSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAG 283
S++D+Y + ++A + F + +KDT++++ +I G
Sbjct: 370 TSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMG 406
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 105/281 (37%), Gaps = 71/281 (25%)
Query: 50 FDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLS 109
F + + + D +W ++ + V+ M G+ P++ ++
Sbjct: 49 FSRNIVTYVKRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVT 108
Query: 110 AVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATC--------------- 154
+VL+AC + + G+ H A+K G G +YV L+ +Y+
Sbjct: 109 SVLRACGKMENMVDGKPIHAQALKNGLCGC-VYVQTGLVGLYSRLGYIELAKKAFDDIAE 167
Query: 155 ---------------CDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQM 199
+D AR VF+ I K+AVSW +I+ Y +GD +F M
Sbjct: 168 KNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAM 227
Query: 200 VLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCA 259
L+ SP S++I + Y CR
Sbjct: 228 PLK----SPASWNILIGG-----------------------------------YVNCREM 248
Query: 260 SEAKQFFCEMTQKDTITWNTLIAGFETL-DSKESLCIFSLM 299
A+ +F M QK+ ++W T+I+G+ L D + + +F LM
Sbjct: 249 KLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLM 289
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 83/182 (45%), Gaps = 10/182 (5%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPN 104
LI I A LFD M RD+V+W ++I+GY NH A K+F M+ G++P+
Sbjct: 189 LIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPD 248
Query: 105 AFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDN----ALMDMYATCCDSMDR 160
+ + L AC G+ G A+ + +++D+ L+D YA C +D
Sbjct: 249 NVAIVSTLSACAQ-----SGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAK-CGFIDT 302
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
A +FE K +W +ITG G+ + FR+MV + +F + C+
Sbjct: 303 AMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSH 362
Query: 221 VG 222
G
Sbjct: 363 SG 364
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 90/227 (39%), Gaps = 35/227 (15%)
Query: 91 KVFPRMLRDGVRPNAFTLSAVLKACKG--------LRALFCGELAHGLAVKIGARGSSIY 142
+ F M R V P+ T V KAC ++ L C L GL + + I
Sbjct: 101 RFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIR 160
Query: 143 V-------DNAL----------MDMYATCCDSMD------RARMVFEDIVTKNAVSWTTL 179
V D+AL + Y D + RAR +F+ + ++ VSW +L
Sbjct: 161 VYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSL 220
Query: 180 ITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA--VSACASVGSGILGKQLHAAVINH 237
I+GY +++F +MV L P + +I +SACA G GK +H
Sbjct: 221 ISGYAQMNHCREAIKLFDEMV--ALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRK 278
Query: 238 GFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGF 284
+ + ++D Y +C A + F + K TWN +I G
Sbjct: 279 RLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGL 325
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 113/257 (43%), Gaps = 36/257 (14%)
Query: 70 VVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRP-NAFTLSAVLKACKGLRALFCGELAH 128
+++ T ++ Y + +H +A +F +M P +A S LK+C G H
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 129 GLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGD 188
+VK S+ +V AL+DMY C S+ AR +F++I +NAV W +I+ YTH G
Sbjct: 72 AHSVKSNFL-SNPFVGCALLDMYGKCL-SVSHARKLFDEIPQRNAVVWNAMISHYTHCGK 129
Query: 189 ---------------------------------AFGGLRVFRQMVLEEGELSPFSFSIAV 215
++ + +R+M+ + + + V
Sbjct: 130 VKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALV 189
Query: 216 SACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTI 275
SAC+++G+ L K++H+ + + + + + +++ Y RC + F M +D +
Sbjct: 190 SACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVV 249
Query: 276 TWNTLIAGFETLDSKES 292
W++LI+ + ES
Sbjct: 250 AWSSLISAYALHGDAES 266
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 115/268 (42%), Gaps = 43/268 (16%)
Query: 54 SIQEAHTLFDEMTHRDVVAWTAMITGYTSC-----------------NHHS--------- 87
S+ A LFDE+ R+ V W AMI+ YT C N S
Sbjct: 98 SVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLV 157
Query: 88 -------RAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSS 140
RA + + +M+ +PN TL A++ AC + A + H A +
Sbjct: 158 GTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFR-NLIEPH 216
Query: 141 IYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMV 200
+ + L++ Y C S+ ++VF+ + ++ V+W++LI+ Y GDA L+ F++M
Sbjct: 217 PQLKSGLVEAYGRC-GSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEME 275
Query: 201 LEEGELSPFSFSIAVSACASVGSG----ILGKQLHAAVINHGFQSNLPVMNSILDMYCRC 256
L + +F + AC+ G + K++ ++G +++ + ++D+ R
Sbjct: 276 LAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQG---DYGLRASKDHYSCLVDVLSRV 332
Query: 257 RCASEAKQFFCEMTQKDTI-TWNTLIAG 283
EA + M +K T TW L+
Sbjct: 333 GRFEEAYKVIQAMPEKPTAKTWGALLGA 360
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L + L+++Y GSI +FD M RDVVAW+++I+ Y A K F M
Sbjct: 219 LKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAK 278
Query: 101 VRPNAFTLSAVLKAC 115
V P+ VLKAC
Sbjct: 279 VTPDDIAFLNVLKAC 293
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 118/264 (44%), Gaps = 23/264 (8%)
Query: 38 LTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRML 97
+TGLT + G ++A ++M +R VV+WT +I GY + A +F RM+
Sbjct: 196 ITGLT--------NLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMV 247
Query: 98 R-DGVRPNAFTLSAVLKACKGLRAL-FCGELAHGLAVKIGARGSSIYVDNALMDMYATCC 155
D ++PN T+ A+L A L L CG + H K G I V N+L+D YA C
Sbjct: 248 ACDAIKPNEITILAILPAVWNLGDLKMCGSV-HAYVGKRGFVPCDIRVTNSLIDAYAK-C 305
Query: 156 DSMDRARMVFEDIVT--KNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSI 213
+ A F +I KN VSWTT+I+ + G + +F+ M E L P ++
Sbjct: 306 GCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDM--ERLGLKPNRVTM 363
Query: 214 AVSACASVGSGILGKQ-----LHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCE 268
+S + G L ++ + V + ++ ++DM R EA++ E
Sbjct: 364 -ISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALE 422
Query: 269 M-TQKDTITWNTLIAGFETLDSKE 291
+ ++ + W L+ D E
Sbjct: 423 IPIEEKAVVWRMLLGACSVYDDAE 446
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 39/198 (19%)
Query: 139 SSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGL----- 193
S +YV AL+ MY + +D A VF+++ +N V+W +ITG T+ GD L
Sbjct: 156 SHVYVQTALVGMYLVGGNMID-AHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEK 214
Query: 194 --------------------------RVFRQMVLEEGELSPFSFSI--AVSACASVGSGI 225
+F +MV + + P +I + A ++G
Sbjct: 215 MPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDA-IKPNEITILAILPAVWNLGDLK 273
Query: 226 LGKQLHAAVINHGF-QSNLPVMNSILDMYCRCRCASEAKQFFCEMT--QKDTITWNTLIA 282
+ +HA V GF ++ V NS++D Y +C C A +FF E+ +K+ ++W T+I+
Sbjct: 274 MCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMIS 333
Query: 283 GFETLD-SKESLCIFSLM 299
F KE++ +F M
Sbjct: 334 AFAIHGMGKEAVSMFKDM 351
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 77/177 (43%), Gaps = 16/177 (9%)
Query: 33 FRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTH--RDVVAWTAMITGYTSCNHHSRAW 90
F P D+ +T LI +Y G IQ A F E+ + +++V+WT MI+ + A
Sbjct: 287 FVPCDIR-VTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAV 345
Query: 91 KVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDM 150
+F M R G++PN T+ +VL AC G LA ++ + Y +
Sbjct: 346 SMFKDMERLGLKPNRVTMISVLNACSH------GGLAEEEFLEFFNTMVNEYKITPDVKH 399
Query: 151 YATCCDSMDRA-------RMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMV 200
Y D + R ++ E + + AV W L+ + DA RV R+++
Sbjct: 400 YGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLM 456
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 107/239 (44%), Gaps = 8/239 (3%)
Query: 53 GSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRD----GVRPNAFTL 108
G + +FD M HRD +W + G + A +F ML+ + ++ L
Sbjct: 137 GRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWIL 196
Query: 109 SAVLKACKGLRALFCGELAHGLAVKIG-ARGSSIYVDNALMDMYATCCDSMDRARMVFED 167
VLKAC +R G+ H L K+G Y+ +L+ Y ++ A +V
Sbjct: 197 GCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGE-FRCLEDANLVLHQ 255
Query: 168 IVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGS-GIL 226
+ N V+W +T G+ +R F +M + + FS + AC+ V G
Sbjct: 256 LSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRS 315
Query: 227 GKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTIT-WNTLIAGF 284
G+Q+HA I GF+S+ + +++MY + +A++ F + +++ WN ++A +
Sbjct: 316 GQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASY 374
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 116/268 (43%), Gaps = 24/268 (8%)
Query: 33 FRPKDLTGLTTDLIKSYFDKGSIQEAHTLFD---EMTHR-DVVAWTAMITGYTSCNHHSR 88
+ P +T T L+ + +G + EA L D EM R D+V + +I G S
Sbjct: 136 YEPDTITFST--LVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSE 193
Query: 89 AWKVFPRMLRDGVRPNAFTLSAVL-KACKGLRALFCGELAHGLA---VKIGARGSSIYVD 144
A + RM+ G +P+ T VL + CK + +L + +K SI +D
Sbjct: 194 ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVID 253
Query: 145 NALMDMYATCCDSMDRARMVFEDIVTK----NAVSWTTLITGYTHRGDAFGGLRVFRQMV 200
+ D S D A +F ++ K + V++++LI G + G G ++ R+M+
Sbjct: 254 SLCKD------GSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 201 LEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCAS 260
+FS + G + K+L+ +I G + NS++D +C+ C
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 261 EAKQFFCEMTQK----DTITWNTLIAGF 284
EA Q F M K D +T++ LI +
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSY 395
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 93/249 (37%), Gaps = 43/249 (17%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
LI + +G + EA L++EM R D + + ++I G+ N A ++F M+ G
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 101 VRPNAFTLSAVLKA-CKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD 159
P+ T S ++ + CK R VD D M
Sbjct: 381 CEPDIVTYSILINSYCKAKR-----------------------VD-----------DGMR 406
Query: 160 RARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACA 219
R + + N +++ TL+ G+ G +F++MV S ++ I +
Sbjct: 407 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 466
Query: 220 SVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK----DTI 275
G ++ + + + N I+ C +A FC ++ K D +
Sbjct: 467 DNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVV 526
Query: 276 TWNTLIAGF 284
T+N +I G
Sbjct: 527 TYNVMIGGL 535
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 128/295 (43%), Gaps = 45/295 (15%)
Query: 50 FDKGSIQEAHTLFDEMTHRDVVA--------WTAMITGYTSCNHHSRAWKVFPRMLRDGV 101
+ I++ HT+ +T +VA + +I Y + + + +F ML V
Sbjct: 25 YSSNQIKQIHTVL--LTSNALVASRWKTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHV 82
Query: 102 RPNAFTLSAVLKACKGLRALFCGELAHGLAVK-------------------IGARGSSIY 142
+PN T +++KA ++ G HG A+K +G SS
Sbjct: 83 QPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRK 142
Query: 143 VDNALMDMYATCCDS----------MDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGG 192
+ + +++ C+S MD A F+ + + VSWTT+I G++ +G
Sbjct: 143 MFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKA 202
Query: 193 LRVFRQMVLEE-GELSP--FSFSIAVSACASVGSG--ILGKQLHAAVINHGFQSNLPVMN 247
L VF +M+ E ++P +F +S+CA+ G LGKQ+H V++ +
Sbjct: 203 LMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGT 262
Query: 248 SILDMYCRCRCASEAKQFFCEMTQKDTITWNTLIAGFETLD-SKESLCIFSLMVS 301
++LDMY + A F ++ K WN +I+ + K++L +F +M S
Sbjct: 263 ALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKS 317
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 82/188 (43%), Gaps = 7/188 (3%)
Query: 52 KGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG---VRPNAFTL 108
G + A F M DVV+WT +I G++ H++A VF M+++ + PN T
Sbjct: 165 NGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATF 224
Query: 109 SAVLKACKGLR--ALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFE 166
+VL +C + G+ HG + + + AL+DMY D ++ A +F+
Sbjct: 225 VSVLSSCANFDQGGIRLGKQIHGYVMS-KEIILTTTLGTALLDMYGKAGD-LEMALTIFD 282
Query: 167 DIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGIL 226
I K +W +I+ G L +F M + + ++ACA L
Sbjct: 283 QIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDL 342
Query: 227 GKQLHAAV 234
G QL +++
Sbjct: 343 GIQLFSSI 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%)
Query: 49 YFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTL 108
Y G ++ A T+FD++ + V AW A+I+ S +A ++F M V PN TL
Sbjct: 268 YGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITL 327
Query: 109 SAVLKAC 115
A+L AC
Sbjct: 328 LAILTAC 334
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 116/268 (43%), Gaps = 24/268 (8%)
Query: 33 FRPKDLTGLTTDLIKSYFDKGSIQEAHTLFD---EMTHR-DVVAWTAMITGYTSCNHHSR 88
+ P +T T LI +G + EA L D EM H+ D++ ++ G +
Sbjct: 154 YEPNTITFST--LINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAE 211
Query: 89 AWKVFPRMLRDGVRPNAFTLSAVLKA-CKGLRALFCGELAHGLA---VKIGARGSSIYVD 144
A + +M+ G +PNA T VL CK + EL + +K+ A SI +D
Sbjct: 212 AMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 145 NALMDMYATCCDSMDRARMVFEDI----VTKNAVSWTTLITGYTHRGDAFGGLRVFRQMV 200
S+D A +F ++ +T N +++ LI G+ + G G ++ R M+
Sbjct: 272 GLCKH------GSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 201 LEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCAS 260
+ + +FS+ + + G ++LH +I+ G + S++D +C+
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 261 EAKQFFCEMTQK----DTITWNTLIAGF 284
+A Q M K + T+N LI G+
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGY 413
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 103/244 (42%), Gaps = 14/244 (5%)
Query: 53 GSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTL 108
GS+ A LF+EM + +++ + +I G+ + K+ M++ + PN T
Sbjct: 277 GSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTF 336
Query: 109 SAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDI 168
S ++ + L E H + G +I +L+D + + +D+A + + +
Sbjct: 337 SVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITY-TSLIDGFCKE-NHLDKANQMVDLM 394
Query: 169 VTK----NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSG 224
V+K N ++ LI GY GL +FR+M L +++ + +G
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 454
Query: 225 ILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK----DTITWNTL 280
+ K+L +++ N+ +LD C + +A + F ++ + D +N +
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 514
Query: 281 IAGF 284
I G
Sbjct: 515 IHGM 518
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 102/248 (41%), Gaps = 44/248 (17%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
LI ++F +G + EA L +EM R D + + +I G+ N A ++F M+
Sbjct: 334 LIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD 393
Query: 101 VRPNAFTLSAVLKA-CKGLRALFCGELAHGLAV--KIGARGSSIYVDNALMDMYATCCDS 157
PN T + ++ CK C + G+ + ++ RG
Sbjct: 394 CLPNIQTYNTLINGFCK------CKRVEDGVELFREMSQRG------------------- 428
Query: 158 MDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSA 217
+ N V++TT+I G+ GD VF+QMV ++SI +
Sbjct: 429 -----------LVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHG 477
Query: 218 CASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK-DTIT 276
S G + + + N+ + N++++ C+ EA FC ++ K D +T
Sbjct: 478 LCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVT 537
Query: 277 WNTLIAGF 284
+NT+I+G
Sbjct: 538 YNTMISGL 545
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 116/271 (42%), Gaps = 30/271 (11%)
Query: 33 FRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSR 88
+ P D+ L++ L+ Y I +A L D+M D +T +I G N S
Sbjct: 149 YEP-DIVTLSS-LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASE 206
Query: 89 AWKVFPRMLRDGVRPNAFTLSAVLKA-CKGLRALFCGELAHGLAVKIGARGSSIYVDNAL 147
A + +M++ G +P+ T V+ CK G++ L + + I A
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKR------GDIDLALNLLNKMEAARI---KAN 257
Query: 148 MDMYATCCDSMDRARMV------FEDIVTK----NAVSWTTLITGYTHRGDAFGGLRVFR 197
+ ++ T DS+ + R V F ++ TK N V++ +LI + G R+
Sbjct: 258 VVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLS 317
Query: 198 QMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCR 257
M+ ++ + +F+ + A G + ++LH +I + N +++ +C
Sbjct: 318 NMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHN 377
Query: 258 CASEAKQFFCEMTQKDTI----TWNTLIAGF 284
EAKQ F M KD + T+NTLI GF
Sbjct: 378 RLDEAKQMFKFMVSKDCLPNIQTYNTLINGF 408
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 105/246 (42%), Gaps = 22/246 (8%)
Query: 55 IQEAHTLFD---EMTHR-DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSA 110
+ EA L D EM H+ ++ ++ G S A + RM+ G +PN T
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 111 VLKA-CKGLRALFCGELAHGLA---VKIGARGSSIYVDNALMDMYATCCDSMDRARMVFE 166
VL CK + EL + +K+ A SI +D D S+D A +F
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKD------GSLDNAFNLFN 287
Query: 167 DIVTK----NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVG 222
++ K + +++ TLI G+ + G G ++ R M+ + + +FS+ + + G
Sbjct: 288 EMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEG 347
Query: 223 SGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK----DTITWN 278
QL ++ G N NS++D +C+ EA Q M K D +T+N
Sbjct: 348 KLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFN 407
Query: 279 TLIAGF 284
LI G+
Sbjct: 408 ILINGY 413
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 117/259 (45%), Gaps = 24/259 (9%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEM----THRDVVAWTAMITGYTSCNHHSRAWKVFPRMLR 98
+ L+ Y I EA L D+M + V + +I G N S A + RM+
Sbjct: 155 SSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVA 214
Query: 99 DGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKI--GARGSSIYVDNALMDMYATC-C 155
G +P+ T V+ GL +LA L K+ G + + N ++D C
Sbjct: 215 KGCQPDLVTYGVVVN---GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIID--GLCKY 269
Query: 156 DSMDRARMVFEDIVTK----NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--F 209
MD A +F+++ TK N V++++LI+ + G R+ M+ E +++P F
Sbjct: 270 KHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI--ERKINPDVF 327
Query: 210 SFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM 269
+FS + A G + ++L+ ++ ++ +S+++ +C EAKQ F M
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 387
Query: 270 TQK----DTITWNTLIAGF 284
K D +T+NTLI GF
Sbjct: 388 VSKHCFPDVVTYNTLIKGF 406
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 113/242 (46%), Gaps = 16/242 (6%)
Query: 55 IQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSA 110
+ +A LF EM + +VV ++++I+ + S A ++ M+ + P+ FT SA
Sbjct: 272 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331
Query: 111 VLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVT 170
++ A L E + VK + SI ++L++ + D +D A+ +FE +V+
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVK-RSIDPSIVTYSSLINGFCMH-DRLDEAKQMFEFMVS 389
Query: 171 K----NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGIL 226
K + V++ TLI G+ G+ VFR+M + +++I + G +
Sbjct: 390 KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDM 449
Query: 227 GKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTI-----TWNTLI 281
+++ +++ G N+ N++LD C+ +A F E Q+ + T+N +I
Sbjct: 450 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF-EYLQRSKMEPTIYTYNIMI 508
Query: 282 AG 283
G
Sbjct: 509 EG 510
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 134/314 (42%), Gaps = 38/314 (12%)
Query: 2 ANAARKFLPRIDFRPAPSVVLHH--------RTQLNDSPFRPKDLT---GLTTD------ 44
+AA+ RI P P +V+ + +L+D+ D+ G+ D
Sbjct: 338 VDAAKDLFYRI---PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNS 394
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
LI Y+ +G + A + +M ++ +V ++T ++ G+ A+ V M DG
Sbjct: 395 LIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADG 454
Query: 101 VRPNAFTLSAVLKA-CKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATC-CDSM 158
++PN + ++ A CK R E+ + K G + +Y N+L+ C D +
Sbjct: 455 LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK-GCK-PDVYTFNSLIS--GLCEVDEI 510
Query: 159 DRARMVFEDIVTK----NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIA 214
A + D++++ N V++ TLI + RG+ ++ +MV + L +++
Sbjct: 511 KHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSL 570
Query: 215 VSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK-- 272
+ G + L ++ G + N +++ CR EA +F EM +
Sbjct: 571 IKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGS 630
Query: 273 --DTITWNTLIAGF 284
D +T+N+LI G
Sbjct: 631 TPDIVTFNSLINGL 644
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 108/253 (42%), Gaps = 43/253 (16%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRM 96
+ T LI+ Y KG I A L +EM + DVV + ++ G A K+F M
Sbjct: 412 IYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM 471
Query: 97 LRDGVRPNAFTLSAVLKA-CKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCC 155
+ P+++TL+ ++ CK G L + + + + I +D
Sbjct: 472 TERALFPDSYTLTILIDGHCK------LGNLQNAMELFQKMKEKRIRLD----------- 514
Query: 156 DSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAV 215
V++ TL+ G+ GD ++ MV +E +P S+SI V
Sbjct: 515 -----------------VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILV 557
Query: 216 SACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK--- 272
+A S G ++ +I+ + + + NS++ YCR AS+ + F +M +
Sbjct: 558 NALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV 617
Query: 273 -DTITWNTLIAGF 284
D I++NTLI GF
Sbjct: 618 PDCISYNTLIYGF 630
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 125/278 (44%), Gaps = 30/278 (10%)
Query: 26 TQLNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRD----VVAWTAMITGYT 81
+Q+ + P +T T LI +Y KG ++EA L + M + V + +I G
Sbjct: 259 SQVQEKGVYPDIVTYNT--LISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLC 316
Query: 82 SCNHHSRAWKVFPRMLRDGVRPNAFTL-SAVLKACKGLRALFCGELAHGLAVKIGARGSS 140
+ RA +VF MLR G+ P++ T S +++ACK G++ V R
Sbjct: 317 KHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK------GDVVETEKVFSDMRSRD 370
Query: 141 IYVD----NALMDMYATCCDSMDRARMVFEDI----VTKNAVSWTTLITGYTHRGDAFGG 192
+ D +++M ++ T ++D+A M F + + + V +T LI GY +G
Sbjct: 371 VVPDLVCFSSMMSLF-TRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVA 429
Query: 193 LRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGK--QLHAAVINHGFQSNLPVMNSIL 250
+ + +M+ + + +++ + +LG+ +L + + + ++
Sbjct: 430 MNLRNEMLQQGCAMDVVTYNTILHGLCK--RKMLGEADKLFNEMTERALFPDSYTLTILI 487
Query: 251 DMYCRCRCASEAKQFFCEMTQK----DTITWNTLIAGF 284
D +C+ A + F +M +K D +T+NTL+ GF
Sbjct: 488 DGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGF 525
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 108/243 (44%), Gaps = 12/243 (4%)
Query: 53 GSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTL 108
G I+EAH L M + DV++++ ++ GY + WK+ M R G++PN++
Sbjct: 260 GRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIY 319
Query: 109 SAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFE-- 166
+++ + L E A ++ G ++ V L+D + D ++ +E
Sbjct: 320 GSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV-VYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 167 -DIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGI 225
+T + +++T +I+G+ GD ++F +M + E +F+ ++ G
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 438
Query: 226 LGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM----TQKDTITWNTLI 281
++H +I G N+ +++D C+ A + EM Q + T+N+++
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 282 AGF 284
G
Sbjct: 499 NGL 501
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 131/305 (42%), Gaps = 21/305 (6%)
Query: 8 FLPRIDFRPAPSVVLHHRTQLNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEM-- 65
F R D R A +++ P LT T +I + G + EA LF EM
Sbjct: 361 FCKRGDIRAASKFFY----EMHSRDITPDVLT--YTAIISGFCQIGDMVEAGKLFHEMFC 414
Query: 66 --THRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKA-CKGLRALF 122
D V +T +I GY H A++V M++ G PN T + ++ CK
Sbjct: 415 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474
Query: 123 CGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV--FEDI-VTKNAVSWTTL 179
EL H + KIG + +I+ N++++ + + ++V FE + + V++TTL
Sbjct: 475 ANELLHEMW-KIGLQ-PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 180 ITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGF 239
+ Y G+ + ++M+ + + + +F++ ++ G G++L ++ G
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 240 QSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK----DTITWNTLIAGF-ETLDSKESLC 294
N NS++ YC A + +M + D T+ L+ G + + KE+
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652
Query: 295 IFSLM 299
+F M
Sbjct: 653 LFQEM 657
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 108/243 (44%), Gaps = 12/243 (4%)
Query: 53 GSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTL 108
G I+EAH L M + DV++++ ++ GY + WK+ M R G++PN++
Sbjct: 260 GRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIY 319
Query: 109 SAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFE-- 166
+++ + L E A ++ G ++ V L+D + D ++ +E
Sbjct: 320 GSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV-VYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 167 -DIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGI 225
+T + +++T +I+G+ GD ++F +M + E +F+ ++ G
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 438
Query: 226 LGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM----TQKDTITWNTLI 281
++H +I G N+ +++D C+ A + EM Q + T+N+++
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 282 AGF 284
G
Sbjct: 499 NGL 501
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 131/305 (42%), Gaps = 21/305 (6%)
Query: 8 FLPRIDFRPAPSVVLHHRTQLNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEM-- 65
F R D R A +++ P LT T +I + G + EA LF EM
Sbjct: 361 FCKRGDIRAASKFFY----EMHSRDITPDVLT--YTAIISGFCQIGDMVEAGKLFHEMFC 414
Query: 66 --THRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKA-CKGLRALF 122
D V +T +I GY H A++V M++ G PN T + ++ CK
Sbjct: 415 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474
Query: 123 CGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMV--FEDI-VTKNAVSWTTL 179
EL H + KIG + +I+ N++++ + + ++V FE + + V++TTL
Sbjct: 475 ANELLHEMW-KIGLQ-PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 180 ITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGF 239
+ Y G+ + ++M+ + + + +F++ ++ G G++L ++ G
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 240 QSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK----DTITWNTLIAGF-ETLDSKESLC 294
N NS++ YC A + +M + D T+ L+ G + + KE+
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652
Query: 295 IFSLM 299
+F M
Sbjct: 653 LFQEM 657
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 107/256 (41%), Gaps = 22/256 (8%)
Query: 45 LIKSYFDKGSIQEAHTLFD---EMTHR-DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
LI +G + EA L D EM H+ ++ A++ G S A + RM+ G
Sbjct: 148 LINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETG 207
Query: 101 VRPNAFTLSAVLKA-CKGLRALFCGELAHGL---AVKIGARGSSIYVDNALMDMYATCCD 156
+PN T VLK CK + EL + +K+ A SI +D D
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKD------G 261
Query: 157 SMDRARMVFEDIVTK----NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFS 212
S+D A +F ++ K + + +TTLI G+ + G G ++ R M+ + +FS
Sbjct: 262 SLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFS 321
Query: 213 IAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK 272
+ G ++LH +I G + S++D +C+ +A M K
Sbjct: 322 ALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK 381
Query: 273 ----DTITWNTLIAGF 284
+ T+N LI G+
Sbjct: 382 GCGPNIRTFNILINGY 397
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 90/248 (36%), Gaps = 41/248 (16%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
LI + +G ++EA L EM R D V +T++I G+ N +A + M+ G
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
PN T + ++ Y L+D D ++
Sbjct: 383 CGPNIRTFNILING---------------------------YCKANLID------DGLEL 409
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
R + V + V++ TLI G+ G +F++MV S+ I +
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK----DTIT 276
G ++ + + ++ + N I+ C +A FC + K D T
Sbjct: 470 NGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKT 529
Query: 277 WNTLIAGF 284
+N +I G
Sbjct: 530 YNIMIGGL 537
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 119/258 (46%), Gaps = 25/258 (9%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVAWTAMITGYTSC----NHHSRAWKVFPRMLRDG 100
++K Y +KG ++ A +FD M + + S + A V+ +M+
Sbjct: 161 ILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFE 220
Query: 101 VRPNAFTLSAVLKA-CKGLRA----LFCGELAHGLAVKIGARGSSIYVDNALMDMYATCC 155
V P+ FT S V+ A C+ +F E L +++ ++ N+L++ YA
Sbjct: 221 VSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLEL-----NVVTYNSLINGYAMIG 275
Query: 156 D--SMDRA-RMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGEL--SPFS 210
D M R R++ E V++N V++T+LI GY +G VF +L+E +L
Sbjct: 276 DVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFE--LLKEKKLVADQHM 333
Query: 211 FSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT 270
+ + + G ++H +I G ++N + NS+++ YC+ EA+Q F M
Sbjct: 334 YGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMN 393
Query: 271 ----QKDTITWNTLIAGF 284
+ D T+NTL+ G+
Sbjct: 394 DWSLKPDHHTYNTLVDGY 411
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 99/242 (40%), Gaps = 30/242 (12%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRDVVA----WTAMITGYTSCNHHSRAWKVFPRMLR 98
T LIK Y KG ++EA +F+ + + +VA + ++ GY A +V M+
Sbjct: 300 TSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIE 359
Query: 99 DGVRPNAFTLSAVLKA-CKGLRALFCGEL------------AHGLAVKIGARGSSIYVDN 145
GVR N ++++ CK + + ++ H + + YVD
Sbjct: 360 IGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDE 419
Query: 146 ALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEG- 204
AL CD M + +V +++ L+ GY+ G AF + +M+L+ G
Sbjct: 420 AL-----KLCDQMCQKEVV------PTVMTYNILLKGYSRIG-AFHDVLSLWKMMLKRGV 467
Query: 205 ELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQ 264
S S + A +G +L V+ G ++ +N ++ C+ +EAK+
Sbjct: 468 NADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKE 527
Query: 265 FF 266
Sbjct: 528 IL 529
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 114/258 (44%), Gaps = 26/258 (10%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L+ + I +A L D+M D V +T +I G N S A + RM++ G
Sbjct: 154 LLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRG 213
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSM-- 158
+P+ T AV+ C LA+ + + + ++ ++ +Y+T DS+
Sbjct: 214 CQPDLVTYGAVVNG-------LCKRGDTDLALNLLNKMEAAKIEANVV-IYSTVIDSLCK 265
Query: 159 ----DRARMVFEDIVTK----NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFS 210
D A +F ++ K N +++++LI+ + G R+ M+ + + +
Sbjct: 266 YRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVT 325
Query: 211 FSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT 270
FS + A G + ++L+ +I N+ +S+++ +C EAKQ M
Sbjct: 326 FSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMI 385
Query: 271 QKD----TITWNTLIAGF 284
+KD +T+NTLI GF
Sbjct: 386 RKDCLPNVVTYNTLINGF 403
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 119/290 (41%), Gaps = 21/290 (7%)
Query: 27 QLNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTS 82
Q+ + ++P +T T LI F EA L D M R D+V + A++ G
Sbjct: 173 QMVEMGYKPDTVT--FTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCK 230
Query: 83 CNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLR------ALFCGELAHGLAVKIGA 136
A + +M + N S V+ + R LF G+ +
Sbjct: 231 RGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVIT 290
Query: 137 RGSSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVF 196
S I + + Y D+ + E + N V+++ LI + +G +++
Sbjct: 291 YSSLI----SCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLY 346
Query: 197 RQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRC 256
+M+ + + F++S ++ + KQ+ +I N+ N++++ +C+
Sbjct: 347 EEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKA 406
Query: 257 RCASEAKQFFCEMTQK----DTITWNTLIAG-FETLDSKESLCIFSLMVS 301
+ + + F EM+Q+ +T+T+ TLI G F+ D + +F MVS
Sbjct: 407 KRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 456
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 109/259 (42%), Gaps = 28/259 (10%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L+ + I EA L D+M D V +T ++ G N S A + RM+ G
Sbjct: 141 LLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG 200
Query: 101 VRPNAFTLSAVLKA-CKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSM- 158
+P+ T AV+ CK GE L + I D + Y+T DS+
Sbjct: 201 CQPDLVTYGAVINGLCKR------GEPDLALNLLNKMEKGKIEADVVI---YSTVIDSLC 251
Query: 159 -----DRARMVFEDIVTK----NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPF 209
D A +F ++ K + ++++LI+ + G R+ M+ + +
Sbjct: 252 KYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVV 311
Query: 210 SFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM 269
+F+ + A A G I ++L +I N+ NS+++ +C EA+Q F M
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 371
Query: 270 TQK----DTITWNTLIAGF 284
K D +T+NTLI GF
Sbjct: 372 VSKDCLPDVVTYNTLINGF 390
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 97/249 (38%), Gaps = 43/249 (17%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
LI ++ +G + EA LFDEM R ++V + ++I G+ + A ++F M+
Sbjct: 316 LIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 375
Query: 101 VRPNAFTLSAVLKA-CKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD 159
P+ T + ++ CK + + D M+
Sbjct: 376 CLPDVVTYNTLINGFCKAKKVV----------------------------------DGME 401
Query: 160 RARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACA 219
R + + N V++TTLI G+ D VF+QMV + + +++ +
Sbjct: 402 LFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 461
Query: 220 SVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK----DTI 275
G + + + ++ N + + C+ + FC ++ K D I
Sbjct: 462 KNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 521
Query: 276 TWNTLIAGF 284
+NT+I+GF
Sbjct: 522 AYNTMISGF 530
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 115/258 (44%), Gaps = 22/258 (8%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLR 98
+ L+ Y I +A L D+M D + +T +I G N S A + RM++
Sbjct: 84 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 143
Query: 99 DGVRPNAFTLSAVLKA-CK-GLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCD 156
G +PN T V+ CK G L L A KI A + + N ++D + C
Sbjct: 144 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA---DVVIFNTIID---SLCK 197
Query: 157 --SMDRARMVFEDIVTK----NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFS 210
+D A +F+++ TK N V++++LI+ G ++ M+ ++ + +
Sbjct: 198 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 257
Query: 211 FSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT 270
F+ + A G + ++LH +I ++ NS+++ +C +AKQ F M
Sbjct: 258 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV 317
Query: 271 QKDTI----TWNTLIAGF 284
KD T+NTLI GF
Sbjct: 318 SKDCFPDLDTYNTLIKGF 335
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 24/153 (15%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
LIK + +++ LF EM+HR D V +T +I G A KVF +M+ DG
Sbjct: 331 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 390
Query: 101 VRPNAFTLSAVLKA-CKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD 159
V P+ T S +L C G+L L V + S I +D + +Y T + M
Sbjct: 391 VPPDIMTYSILLDGLCNN------GKLEKALEVFDYMQKSEIKLD---IYIYTTMIEGMC 441
Query: 160 RARMVFE--DI--------VTKNAVSWTTLITG 182
+A V + D+ V N V++ T+I+G
Sbjct: 442 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 474
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 116/258 (44%), Gaps = 22/258 (8%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLR 98
+ L+ Y I +A L D+M D + +T +I G N S A + RM++
Sbjct: 159 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 218
Query: 99 DGVRPNAFTLSAVLKA-CK-GLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCD 156
G +PN T V+ CK G L L A KI A + + N ++D + C
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEA---DVVIFNTIID---SLCK 272
Query: 157 --SMDRARMVFEDIVTK----NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFS 210
+D A +F+++ TK N V++++LI+ G ++ M+ ++ + +
Sbjct: 273 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 332
Query: 211 FSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT 270
F+ + A G + ++L+ +I ++ NS+++ +C +AKQ F M
Sbjct: 333 FNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 392
Query: 271 QK----DTITWNTLIAGF 284
K D +T+NTLI GF
Sbjct: 393 SKDCFPDVVTYNTLIKGF 410
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/277 (19%), Positives = 115/277 (41%), Gaps = 49/277 (17%)
Query: 55 IQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSA 110
+ +A LF EM + +VV ++++I+ S S A ++ M+ + PN T +A
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 335
Query: 111 VLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFEDIVT 170
++ A E + +K + I+ N+L++ + D +D+A+ +FE +V+
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIK-RSIDPDIFTYNSLVNGFCMH-DRLDKAKQMFEFMVS 393
Query: 171 KN----AVSWTTLITGYT-----------------------------------HRGDAFG 191
K+ V++ TLI G+ H GD
Sbjct: 394 KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 453
Query: 192 GLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILD 251
+VF+QMV + ++SI + + G ++ + + ++ + ++++
Sbjct: 454 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 513
Query: 252 MYCRCRCASEAKQFFCEMTQK----DTITWNTLIAGF 284
C+ + FC ++ K + +T+NT+I+G
Sbjct: 514 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 550
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 24/153 (15%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
LIK + +++ LF EM+HR D V +T +I G A KVF +M+ DG
Sbjct: 406 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 465
Query: 101 VRPNAFTLSAVLKA-CKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD 159
V P+ T S +L C G+L L V + S I +D + +Y T + M
Sbjct: 466 VPPDIMTYSILLDGLCNN------GKLEKALEVFDYMQKSEIKLD---IYIYTTMIEGMC 516
Query: 160 RARMVFE--DI--------VTKNAVSWTTLITG 182
+A V + D+ V N V++ T+I+G
Sbjct: 517 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 549
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 126/288 (43%), Gaps = 31/288 (10%)
Query: 8 FLPRIDFRPAPSVVLHHRTQLNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTH 67
F + RP PS+V D T + T + K I H + +
Sbjct: 67 FCEMLQSRPIPSIV---------------DFTRVLTVIAKMNKFDIVIYLYHKMENLGIS 111
Query: 68 RDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKA-CKGLRALFCGEL 126
D+ ++T +I + C+ S A + +M++ G RP+ TL ++L C+G R +
Sbjct: 112 HDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRF----QE 167
Query: 127 AHGLAVKIGARG--SSIYVDNALMDMYATCCDSMDRARMVFEDIVTK----NAVSWTTLI 180
A L + G ++ + N +++ D ++ A VF + K +AV++ TLI
Sbjct: 168 AVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD-LNNALEVFYCMEKKGIRADAVTYNTLI 226
Query: 181 TGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQ 240
+G ++ G R+ R MV + + + F+ + G+ + + L+ +I
Sbjct: 227 SGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVV 286
Query: 241 SNLPVMNSILDMYCRCRCASEAKQFFCEMTQK----DTITWNTLIAGF 284
N+ NS+++ +C C +AK F M K D +T+NTLI GF
Sbjct: 287 PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 334
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 107/262 (40%), Gaps = 44/262 (16%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
LI + G +A L +M R +V+ +TA+I + + A ++ M+R
Sbjct: 225 LISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS 284
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDR 160
V PN FT ++++ FC G G + Y+ + ++
Sbjct: 285 VVPNVFTYNSLING-------FCIH---------GCLGDAKYMFDLMV------------ 316
Query: 161 ARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACAS 220
++ F D+VT N TLITG+ G+++F +M + F+++ +
Sbjct: 317 SKGCFPDVVTYN-----TLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQ 371
Query: 221 VGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK-----DTI 275
G + +++ +++ G ++ N +LD C E E QK D I
Sbjct: 372 AGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCN-NGKIEKALVMVEDLQKSEMDVDII 430
Query: 276 TWNTLIAGFETLDS-KESLCIF 296
T+N +I G D KE+ C+F
Sbjct: 431 TYNIIIQGLCRTDKLKEAWCLF 452
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 104/260 (40%), Gaps = 43/260 (16%)
Query: 33 FRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTH----RDVVAWTAMITGYTSCNHHSR 88
FRP +T L+ + QEA +L D M +VV + +I G +
Sbjct: 145 FRPSIVT--LGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNN 202
Query: 89 AWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALM 148
A +VF M + G+R +A T + ++ G S + D A +
Sbjct: 203 ALEVFYCMEKKGIRADAVTYNTLIS---------------------GLSNSGRWTDAARL 241
Query: 149 DMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP 208
R + + + N + +T LI + G+ ++++M+ +
Sbjct: 242 ------------LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNV 289
Query: 209 FSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCE 268
F+++ ++ G K + +++ G ++ N+++ +C+ + + + FCE
Sbjct: 290 FTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCE 349
Query: 269 MTQK----DTITWNTLIAGF 284
MT + D T+NTLI G+
Sbjct: 350 MTYQGLVGDAFTYNTLIHGY 369
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 106/250 (42%), Gaps = 45/250 (18%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTH----RDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L+ + + + +A +L D+M D+VA+ A+I + A+ F + R G
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 220
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNA--LMDMYATCCDSM 158
+RPN T +A L +GL SS + D A L DM
Sbjct: 221 IRPNVVTYTA---------------LVNGLC------NSSRWSDAARLLSDM-------- 251
Query: 159 DRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSAC 218
+ +T N ++++ L+ + G +F +MV + ++S ++
Sbjct: 252 ------IKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 219 ASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK----DT 274
Q+ +++ G +++ N++++ +C+ + + + F EM+Q+ +T
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 275 ITWNTLIAGF 284
+T+NTLI GF
Sbjct: 366 VTYNTLIQGF 375
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 96/226 (42%), Gaps = 10/226 (4%)
Query: 67 HRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKA-CKGLRALFCGE 125
D+ + +I + C S A + +ML+ G P+ T+ +++ C+ R
Sbjct: 117 RNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVS 176
Query: 126 LAHGLAVKIGARGSSIYVDNALMDMYAT---CCDSMDRARMVFEDIVTKNAVSWTTLITG 182
L + V+IG + I NA++D D+ D + + + N V++T L+ G
Sbjct: 177 LVDKM-VEIGYK-PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG 234
Query: 183 YTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSN 242
+ R+ M+ ++ + ++S + A G + K+L ++ +
Sbjct: 235 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294
Query: 243 LPVMNSILDMYCRCRCASEAKQFFCEMTQK----DTITWNTLIAGF 284
+ +S+++ C EA Q F M K D +++NTLI GF
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGF 340
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 102/257 (39%), Gaps = 43/257 (16%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
LI ++ +G + EA L+DEM R D+ ++++I G+ + A +F M+
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 393
Query: 101 VRPNAFTLSAVLKA-CKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD 159
PN T S ++K CK R E L ++ RG
Sbjct: 394 CFPNVVTYSTLIKGFCKAKRV----EEGMELFREMSQRG--------------------- 428
Query: 160 RARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACA 219
+ N V++TTLI G+ D VF+QMV + +++I +
Sbjct: 429 ---------LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479
Query: 220 SVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK----DTI 275
G + + + ++ N +++ C+ + + FC ++ K + I
Sbjct: 480 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVI 539
Query: 276 TWNTLIAGFETLDSKES 292
+NT+I+GF SKE
Sbjct: 540 AYNTMISGFCRKGSKEE 556
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 117/267 (43%), Gaps = 22/267 (8%)
Query: 33 FRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSR 88
+ P D+ L++ L+ Y I +A L D+M D +T +I G N S
Sbjct: 149 YEP-DIVTLSS-LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASE 206
Query: 89 AWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKI--GARGSSIYVDNA 146
A + +M++ G +P+ T V+ GL +LA L K+ G + + + N
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVN---GLCKRGDIDLALSLLKKMEKGKIEADVVIYNT 263
Query: 147 LMDMYATC-CDSMDRARMVFEDIVTK----NAVSWTTLITGYTHRGDAFGGLRVFRQMVL 201
++D C MD A +F ++ K + ++++LI+ + G R+ M+
Sbjct: 264 IID--GLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE 321
Query: 202 EEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASE 261
+ + +FS + A G + ++L+ +I ++ +S+++ +C E
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 381
Query: 262 AKQFFCEMTQKD----TITWNTLIAGF 284
AK F M KD +T++TLI GF
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGF 408
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 113/253 (44%), Gaps = 33/253 (13%)
Query: 69 DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVL-------KACKGLRAL 121
D+V ++++ GY S A + +M+ G +P+ FT + ++ KA + + AL
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV-AL 210
Query: 122 FCGELAHGLAVKIGARGSSIYVDNAL-----MDMYATCCDSMDRARMVFEDIVTKNAVSW 176
+ G + G+ + N L +D+ + M++ + + + V +
Sbjct: 211 VDQMVQRGCQPDLVTYGTVV---NGLCKRGDIDLALSLLKKMEKGK------IEADVVIY 261
Query: 177 TTLITG---YTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAA 233
T+I G Y H DA L +F +M + F++S +S + G +L +
Sbjct: 262 NTIIDGLCKYKHMDDA---LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD 318
Query: 234 VINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK----DTITWNTLIAGFETLDS 289
+I N+ ++++D + + EA++ + EM ++ D T+++LI GF D
Sbjct: 319 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 378
Query: 290 -KESLCIFSLMVS 301
E+ +F LM+S
Sbjct: 379 LDEAKHMFELMIS 391
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 151/372 (40%), Gaps = 84/372 (22%)
Query: 4 AARKFLPRIDFRPAPSVVLH--------HRTQLNDS--PFRPKDLTGLTTDLI------K 47
A+R +D PAP+VV R +++ + F+ + G+ DLI
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 48 SYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRP 103
YF G + H LF + H+ DVV +++ I Y + A V+ RML G+ P
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389
Query: 104 NAFTLSAVLKA-CKGLRALFCGELAHGLAVKIGARG--SSIYVDNALMDMYATCCDSMDR 160
N T + ++K C+ R A G+ +I RG SI ++L+D + C ++
Sbjct: 390 NVVTYTILIKGLCQDGRIY----EAFGMYGQILKRGMEPSIVTYSSLIDGFCKC-GNLRS 444
Query: 161 ARMVFEDIVTK---------------------------------------NAVSWTTLIT 181
++ED++ N V + +LI
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLID 504
Query: 182 GYTHRGDAFGGLRVFRQMVLE--EGELSPFSFSIAVSA-----CASVGSGILGKQLHAAV 234
G+ L+VFR M + + +++ F+ + VS C + I G QL +
Sbjct: 505 GWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTI-GLQLFDLM 563
Query: 235 INHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT----QKDTITWNTLIAGF---ETL 287
+ +++ V N ++ + +C +A +FF + + D +T+NT+I G+ L
Sbjct: 564 QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRL 623
Query: 288 DSKESLCIFSLM 299
D E IF L+
Sbjct: 624 DEAER--IFELL 633
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 91/205 (44%), Gaps = 20/205 (9%)
Query: 93 FPRMLRDGVRPNAFTLSAVLKACKGLRALFC-GELA-----HGLAVKIGARGSSIYVDNA 146
F ++ R G+ P+ + + L ALFC GE+ H L ++ G R + +
Sbjct: 204 FDKLCRGGIEPSGVSAHGFV-----LDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKV 258
Query: 147 LMDMYATCCDSMDRA-RMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGE 205
L + + R +V + N V++ TLI G+ RG+ +F+ V+E+
Sbjct: 259 LKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFK--VMEQRG 316
Query: 206 LSP--FSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEA- 262
+ P ++S + G +G +L + ++ G + ++ V +S +D+Y + + A
Sbjct: 317 IEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATAS 376
Query: 263 ---KQFFCEMTQKDTITWNTLIAGF 284
K+ C+ + +T+ LI G
Sbjct: 377 VVYKRMLCQGISPNVVTYTILIKGL 401
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 105/239 (43%), Gaps = 15/239 (6%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
LI + G+++ A L +EMT + DV+ +T ++ G+ + S A +V+ MLR G
Sbjct: 415 LIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKG 474
Query: 101 VRPN--AFTLSAV--LKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMD---MYAT 153
++P+ A+T AV L+ +A H V + + N +D
Sbjct: 475 IKPDGYAYTTRAVGELRLGDSDKAFRL----HEEMVATDHHAPDLTIYNVRIDGLCKVGN 530
Query: 154 CCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSI 213
+++ R +F + + V++TT+I GY G ++ +M+ + S ++ +
Sbjct: 531 LVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFV 590
Query: 214 AVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK 272
+ A G Q + G + N+ N++L C+ EA ++ C+M ++
Sbjct: 591 LIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEE 649
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 99/250 (39%), Gaps = 50/250 (20%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHR-----DVVAWTAMITGYTSCNHHSRAWKVFPRMLRD 99
LI ++ +G + EA L+DEM DVVA+ +I G+ +VF M +
Sbjct: 326 LIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQR 385
Query: 100 GVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD 159
G+ N T + L HG A CD+
Sbjct: 386 GLVGNTVTYTT---------------LIHGF-------------------FQARDCDN-- 409
Query: 160 RARMVFEDIVTK----NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAV 215
A+MVF+ +V+ + +++ L+ G + G+ L VF M + +L +++ +
Sbjct: 410 -AQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMI 468
Query: 216 SACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTI 275
A G G L ++ G + N+ +++ +CR EA F EM + +
Sbjct: 469 EALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPL 528
Query: 276 ----TWNTLI 281
T+NTLI
Sbjct: 529 PNSGTYNTLI 538
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 101/253 (39%), Gaps = 50/253 (19%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L+ + I EA L D+M D V +T ++ G N S A + RM+ G
Sbjct: 151 LLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG 210
Query: 101 VRPNAFTLSAVLKA-CKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD 159
+P+ T AV+ CK RG D+ + M+
Sbjct: 211 CQPDLVTYGAVINGLCK--------------------RGEP--------DLALNLLNKME 242
Query: 160 RARMVFEDIVTKNAVSWTTLITG---YTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVS 216
+ + + + V + T+I G Y H DAF +F +M + + F+++ +S
Sbjct: 243 KGK------IEADVVIYNTIIDGLCKYKHMDDAFD---LFNKMETKGIKPDVFTYNPLIS 293
Query: 217 ACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK---- 272
+ G +L + ++ +L N+++D + + EA++ + EM +
Sbjct: 294 CLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF 353
Query: 273 -DTITWNTLIAGF 284
D + +NTLI GF
Sbjct: 354 PDVVAYNTLIKGF 366
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 99/233 (42%), Gaps = 50/233 (21%)
Query: 63 DEMTHR-DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRAL 121
+EM R DVV + +I G + A ++F RM RDGVR +A T ++
Sbjct: 166 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNS----------- 214
Query: 122 FCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSM--DRAR----MVFEDIVTKNAVS 175
L GL CC D AR MV DIV N ++
Sbjct: 215 ----LVAGL-----------------------CCSGRWSDAARLMRDMVMRDIVP-NVIT 246
Query: 176 WTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVI 235
+T +I + G ++++ +M + F+++ ++ G KQ+ ++
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 236 NHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK----DTITWNTLIAGF 284
G ++ N++++ +C+ + E + F EM Q+ DTIT+NT+I G+
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 359
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 117/286 (40%), Gaps = 43/286 (15%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRM 96
+ T LIK++ +A + EM + D+ + ++I G + A M
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513
Query: 97 LRDGVRPNAFTLSAVL-------------KACKGLRALFCGELAH-----GLAVKIGARG 138
+ +G++PNAFT A + K K +R CG L + GL + +G
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE--CGVLPNKVLCTGLINEYCKKG 571
Query: 139 SSIYVDNALMDMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQ 198
I ++ R + + + +A ++T L+ G +FR+
Sbjct: 572 KVI--------------EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFRE 617
Query: 199 MVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRC 258
M + FS+ + ++ + +G+ + ++ G N+ + N +L +CR
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE 677
Query: 259 ASEAKQFFCEMTQK----DTITWNTLIAGF-ETLDSKESLCIFSLM 299
+AK+ EM+ K + +T+ T+I G+ ++ D E+ +F M
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 22/192 (11%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRM 96
L T LI Y KG + EA + + M + D +T ++ G + A ++F M
Sbjct: 559 LCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM 618
Query: 97 LRDGVRPNAFTLSAVLKACKGL------RALFCGELAHGLAVKIGARGSSIYVDNALMDM 150
G+ P+ F+ ++ L ++F + GL ++ + N L+
Sbjct: 619 RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLT-------PNVIIYNMLLGG 671
Query: 151 YATCCDSMDRARMVFEDIVTK----NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGEL 206
+ + +++A+ + +++ K NAV++ T+I GY GD R+F +M L+
Sbjct: 672 FCRSGE-IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP 730
Query: 207 SPFSFSIAVSAC 218
F ++ V C
Sbjct: 731 DSFVYTTLVDGC 742
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 122/287 (42%), Gaps = 49/287 (17%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRD----VVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L+ + +G+I +A +FDE+T R VV++ +I GY + +++ +M +
Sbjct: 246 LMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSR 305
Query: 101 VRPNAFTLSAVLKA-CK-----GLRALF---CGE-----------LAHGLA--------- 131
RP+ FT SA++ A CK G LF C L HG +
Sbjct: 306 TRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMK 365
Query: 132 ---VKIGARG--SSIYVDNALMDMYATCCDSMDRARMVFEDIVTK----NAVSWTTLITG 182
K+ ++G I + N L++ + D + AR + + ++ + + +++TTLI G
Sbjct: 366 ESYQKMLSKGLQPDIVLYNTLVNGFCKNGD-LVAARNIVDGMIRRGLRPDKITYTTLIDG 424
Query: 183 YTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSN 242
+ GD L + ++M EL FS V G I ++ ++ G + +
Sbjct: 425 FCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPD 484
Query: 243 LPVMNSILDMYCRCRCASEAKQFFCEMTQKD-----TITWNTLIAGF 284
++D +C+ A + EM Q D +T+N L+ G
Sbjct: 485 DVTYTMMMDAFCKKGDAQTGFKLLKEM-QSDGHVPSVVTYNVLLNGL 530
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 118/288 (40%), Gaps = 33/288 (11%)
Query: 16 PAPSVVLHHRTQLNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEM----THRDVV 71
P VL +L P D+ L++ L+ Y I EA L D+M + V
Sbjct: 132 PLALAVLGKMMKLGYEP----DIVTLSS-LLNGYCHGKRISEAVALVDQMFVMEYQPNTV 186
Query: 72 AWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKA-CKGLRALFCGELAHGL 130
+ +I G N S A + RM+ G +P+ FT V+ CK G++ L
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR------GDIDLAL 240
Query: 131 AVKIGARGSSIYVDNALMDMYATCCDSM------DRARMVFEDIVTK----NAVSWTTLI 180
++ I D + Y T D++ + A +F ++ K N V++ +LI
Sbjct: 241 SLLKKMEKGKIEADVVI---YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 181 TGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQ 240
+ G R+ M+ + + +FS + A G + ++L+ +I
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 241 SNLPVMNSILDMYCRCRCASEAKQFFCEMTQKD----TITWNTLIAGF 284
++ +S+++ +C EAK F M KD +T+NTLI GF
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 42/259 (16%)
Query: 52 KGSIQEAHTLFDEM----THRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFT 107
+G I A +L +M DVV +T +I + + + A +F M G+RPN T
Sbjct: 233 RGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 292
Query: 108 LSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRARMVFED 167
+++++ C Y D+ + E
Sbjct: 293 YNSLIRC-------LCN--------------------------YGRWSDASRLLSDMIER 319
Query: 168 IVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILG 227
+ N V+++ LI + G +++ +M+ + F++S ++
Sbjct: 320 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 379
Query: 228 KQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK----DTITWNTLIAG 283
K + +I+ N+ N+++ +C+ + E + F EM+Q+ +T+T+NTLI G
Sbjct: 380 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 439
Query: 284 -FETLDSKESLCIFSLMVS 301
F+ D + IF MVS
Sbjct: 440 LFQAGDCDMAQKIFKKMVS 458
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 98/224 (43%), Gaps = 26/224 (11%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
LIK + ++E LF EM+ R + V + +I G A K+F +M+ DG
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 101 VRPNAFTLSAVLKA-CKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD 159
V P+ T S +L CK G+L L V + S + D + Y + M
Sbjct: 461 VPPDIITYSILLDGLCK------YGKLEKALVVFEYLQKSKMEPD---IYTYNIMIEGMC 511
Query: 160 RARMVFE--DI--------VTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGEL-SP 208
+A V + D+ V N + +TT+I+G+ +G +FR+M E+G L +
Sbjct: 512 KAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK-EDGTLPNS 570
Query: 209 FSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDM 252
+++ + A G +L + + GF + ++ +++M
Sbjct: 571 GTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM 614
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 113/263 (42%), Gaps = 32/263 (12%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLR 98
+ L+ Y I +A L D+M D + +T +I G N S A + RM++
Sbjct: 159 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 218
Query: 99 DGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSM 158
G +PN T V+ C LA + + + ++ ++ +Y+T DS+
Sbjct: 219 RGCQPNLVTYGVVVNG-------LCKRGDIDLAFNLLNKMEAAKIEANVV-IYSTVIDSL 270
Query: 159 ------DRARMVFEDIVTK----NAVSWTTLIT---GYTHRGDAFGGLRVFRQMVLEEGE 205
D A +F ++ K N +++++LI+ Y DA R+ M+ +
Sbjct: 271 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDAS---RLLSDMIERKIN 327
Query: 206 LSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQF 265
+ +F+ + A G + ++L+ +I ++ +S+++ +C EAK
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387
Query: 266 FCEMTQKD----TITWNTLIAGF 284
F M KD +T+NTLI GF
Sbjct: 388 FELMISKDCFPNVVTYNTLINGF 410
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 96/249 (38%), Gaps = 43/249 (17%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
LI ++ +G + EA L+DEM R D+ ++++I G+ + A +F M+
Sbjct: 336 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 395
Query: 101 VRPNAFTLSAVLKA-CKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD 159
PN T + ++ CK R EL ++ RG
Sbjct: 396 CFPNVVTYNTLINGFCKAKRIDEGVELFR----EMSQRG--------------------- 430
Query: 160 RARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACA 219
+ N V++TTLI G+ D VF+QMV + + +++ +
Sbjct: 431 ---------LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 481
Query: 220 SVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK----DTI 275
G + + + + N +++ C+ + FC ++ K D I
Sbjct: 482 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 541
Query: 276 TWNTLIAGF 284
+NT+I+GF
Sbjct: 542 IYNTMISGF 550
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 96/248 (38%), Gaps = 42/248 (16%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTH-----RDVVAWTAMITGYTSCNHHSRAWKVFPRMLRD 99
LI+ + + +A +F ++ DVV +T+MI+GY A + MLR
Sbjct: 247 LIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 306
Query: 100 GVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD 159
G+ P T + ++ + E G + G
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGC----------------------- 343
Query: 160 RARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACA 219
F D+VT +T+LI GY G G R++ +M + F++SI ++A
Sbjct: 344 -----FPDVVT-----FTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALC 393
Query: 220 SVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK----DTI 275
+ + ++L + + + N ++D +C+ +EA EM +K D I
Sbjct: 394 NENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKI 453
Query: 276 TWNTLIAG 283
T+ LI G
Sbjct: 454 TFTILIIG 461
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 14/207 (6%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTH----RDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L+ Y G + A + +M DVV +T++I GY S+ ++++ M G
Sbjct: 318 LVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARG 377
Query: 101 VRPNAFTLSAVLKA-CKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD 159
+ PNAFT S ++ A C R L EL LA K +Y N ++D + ++
Sbjct: 378 MFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMY--NPVIDGFCK-AGKVN 434
Query: 160 RARMVFEDIVTK----NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAV 215
A ++ E++ K + +++T LI G+ +G F + +F +MV SP +++
Sbjct: 435 EANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMV--AIGCSPDKITVSS 492
Query: 216 SACASVGSGILGKQLHAAVINHGFQSN 242
+ +G+ + H I QSN
Sbjct: 493 LLSCLLKAGMAKEAYHLNQIARKGQSN 519
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 96/248 (38%), Gaps = 42/248 (16%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTH-----RDVVAWTAMITGYTSCNHHSRAWKVFPRMLRD 99
LI+ + + +A +F ++ DVV +T+MI+GY A + MLR
Sbjct: 247 LIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 306
Query: 100 GVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD 159
G+ P T + ++ + E G + G
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGC----------------------- 343
Query: 160 RARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACA 219
F D+VT +T+LI GY G G R++ +M + F++SI ++A
Sbjct: 344 -----FPDVVT-----FTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALC 393
Query: 220 SVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK----DTI 275
+ + ++L + + + N ++D +C+ +EA EM +K D I
Sbjct: 394 NENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKI 453
Query: 276 TWNTLIAG 283
T+ LI G
Sbjct: 454 TFTILIIG 461
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 14/207 (6%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTH----RDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L+ Y G + A + +M DVV +T++I GY S+ ++++ M G
Sbjct: 318 LVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARG 377
Query: 101 VRPNAFTLSAVLKA-CKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD 159
+ PNAFT S ++ A C R L EL LA K +Y N ++D + ++
Sbjct: 378 MFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMY--NPVIDGFCK-AGKVN 434
Query: 160 RARMVFEDIVTK----NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAV 215
A ++ E++ K + +++T LI G+ +G F + +F +MV SP +++
Sbjct: 435 EANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMV--AIGCSPDKITVSS 492
Query: 216 SACASVGSGILGKQLHAAVINHGFQSN 242
+ +G+ + H I QSN
Sbjct: 493 LLSCLLKAGMAKEAYHLNQIARKGQSN 519
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 124/297 (41%), Gaps = 25/297 (8%)
Query: 5 ARKFLPRIDFRPAPSVVLHHRTQLNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDE 64
A + L ++ R S L R+ + P+D++ + + L+ Y G I ++ +F++
Sbjct: 99 AHQLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQ 158
Query: 65 M----THRDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRA 120
+ + A T ++ WK+F +M++ GV N + ++ AC
Sbjct: 159 IRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSK--- 215
Query: 121 LFCG--ELAHGLAVKIGARG--SSIYVDNALMDMYATCCDSMDRARMVFEDI-----VTK 171
G E A L ++ +G I+ N L+ +Y C SM + +D V
Sbjct: 216 --SGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVY--CKKSMHFEALSVQDRMERSGVAP 271
Query: 172 NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLH 231
N V++ + I G++ G R+FR+ + ++ + +++ + + +L
Sbjct: 272 NIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTANHVTYTTLIDGYCRMNDIDEALRLR 330
Query: 232 AAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK----DTITWNTLIAGF 284
+ + GF + NSIL C EA + EM+ K D IT NTLI +
Sbjct: 331 EVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAY 387
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 97/253 (38%), Gaps = 51/253 (20%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
LIK F +G + EA L D M DVV + +++ G S A + +M
Sbjct: 164 LIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN 223
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDS-MD 159
V+ + FT S ++ + C D +D
Sbjct: 224 VKADVFTYSTIIDS--------------------------------------LCRDGCID 245
Query: 160 RARMVFEDIVTK----NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAV 215
A +F+++ TK + V++ +L+ G G G + + MV E + +F++ +
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 216 SACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK--- 272
G +L+ +I G N+ N+++D YC SEA M +
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365
Query: 273 -DTITWNTLIAGF 284
D +T+ +LI G+
Sbjct: 366 PDIVTFTSLIKGY 378
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 107/258 (41%), Gaps = 25/258 (9%)
Query: 55 IQEAHTLFDEMTHR---DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAV 111
+++A+ LF + R D V + ++ G+ +A +V M+ G+ PN T + +
Sbjct: 177 VEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTM 236
Query: 112 LKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCD------SMDRARMVF 165
LK RA G++ H + + +D + Y T + RAR VF
Sbjct: 237 LKGF--FRA---GQIRHAWEFFLEMKKRDCEID---VVTYTTVVHGFGVAGEIKRARNVF 288
Query: 166 EDIVTKNAV----SWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASV 221
++++ + + ++ +I + + + +F +MV E + ++++ +
Sbjct: 289 DEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHA 348
Query: 222 GSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKDTI----TW 277
G G++L + N G + N N ++ Y C +A F +M D + T+
Sbjct: 349 GEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTY 408
Query: 278 NTLIAGFETLDSKESLCI 295
N LI+G E + +
Sbjct: 409 NILISGMFVRKRSEDMVV 426
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 119/303 (39%), Gaps = 59/303 (19%)
Query: 4 AARKFLPRIDFRPAPSVVLH--------HRTQLNDS--PFRPKDLTGLTTDLI------K 47
A+R +D PAP+VV R +++ + F+ + G+ DLI
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 48 SYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRP 103
YF G + H LF + H+ DVV +++ I Y + A V+ RML G+ P
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389
Query: 104 NAFTLSAVLKA-CKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMDRAR 162
N T + ++K C+ R A G+ +I RG
Sbjct: 390 NVVTYTILIKGLCQDGRIY----EAFGMYGQILKRG------------------------ 421
Query: 163 MVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVG 222
+ + V++++LI G+ G+ G ++ M+ + + V + G
Sbjct: 422 ------MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Query: 223 SGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM----TQKDTITWN 278
+ + ++ + N+ V NS++D +CR EA + F M + D T+
Sbjct: 476 LMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFT 535
Query: 279 TLI 281
T++
Sbjct: 536 TVM 538
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 118/276 (42%), Gaps = 27/276 (9%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLR 98
T LIK G I EA ++ ++ R +V ++++I G+ C + + ++ M++
Sbjct: 395 TILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK 454
Query: 99 DGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVD----NALMDMYATC 154
G P+ ++ GL G + H + + G SI ++ N+L+D +
Sbjct: 455 MGYPPDVVIYGVLVD---GLSKQ--GLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509
Query: 155 CDSMDRARMVFEDI----VTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFS 210
+ D A VF + + + ++TT++ G L +F +M E +
Sbjct: 510 -NRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALA 568
Query: 211 FSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT 270
+ + A +G QL + + +++ V N ++ + +C +A +FF +
Sbjct: 569 YCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI 628
Query: 271 ----QKDTITWNTLIAGF---ETLDSKESLCIFSLM 299
+ D +T+NT+I G+ LD E IF L+
Sbjct: 629 EGKMEPDIVTYNTMICGYCSLRRLDEAER--IFELL 662
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 91/205 (44%), Gaps = 20/205 (9%)
Query: 93 FPRMLRDGVRPNAFTLSAVLKACKGLRALFC-GELA-----HGLAVKIGARGSSIYVDNA 146
F ++ R G+ P+ + + L ALFC GE+ H L ++ G R + +
Sbjct: 204 FDKLCRGGIEPSGVSAHGFV-----LDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKV 258
Query: 147 LMDMYATCCDSMDRA-RMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGE 205
L + + R +V + N V++ TLI G+ RG+ +F+ V+E+
Sbjct: 259 LKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFK--VMEQRG 316
Query: 206 LSP--FSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEA- 262
+ P ++S + G +G +L + ++ G + ++ V +S +D+Y + + A
Sbjct: 317 IEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATAS 376
Query: 263 ---KQFFCEMTQKDTITWNTLIAGF 284
K+ C+ + +T+ LI G
Sbjct: 377 VVYKRMLCQGISPNVVTYTILIKGL 401
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 94/231 (40%), Gaps = 41/231 (17%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHRDVVA----WTAMITGYTSCNHHSRAWKVFPRMLRDG 100
LI +K +++A + DEMT V A +T ++ GY S +A++ F R+ +G
Sbjct: 630 LINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEG 689
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAV--KIGARGSSIYVDNALMDMYATCCDSM 158
+ + FT A+LKAC G + LAV ++ AR
Sbjct: 690 LDVDIFTYEALLKAC-----CKSGRMQSALAVTKEMSARN-------------------- 724
Query: 159 DRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSAC 218
+ +N+ + LI G+ RGD + + +QM E + +++ +SAC
Sbjct: 725 ----------IPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISAC 774
Query: 219 ASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM 269
+ G Q + G + N+ +++ + R +A + EM
Sbjct: 775 SKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEM 825
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 111/254 (43%), Gaps = 35/254 (13%)
Query: 69 DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKA-CKGLRALFCGELA 127
D+V +T++I G+ N A + +M+ G++P+ + ++ + CK G +
Sbjct: 141 DIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKN------GHVN 194
Query: 128 HGLAVKIGARGSSIYVDNALMDMYATCC------------DSMDRA---RMVFEDIVTKN 172
+ L++ I D + MY + DS+ R R + D++T N
Sbjct: 195 YALSLFDQMENYGIRPD---VVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFN 251
Query: 173 AVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVGSGILGKQLHA 232
A LI + G ++ +M+ + F+++ ++ G +Q+
Sbjct: 252 A-----LIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFY 306
Query: 233 AVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK----DTITWNTLIAGFETLD 288
+ G ++ S+++ +C+C+ +A + F EM+QK +TIT+ TLI GF +
Sbjct: 307 LMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVG 366
Query: 289 SKE-SLCIFSLMVS 301
+ +FS MVS
Sbjct: 367 KPNVAQEVFSHMVS 380
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/260 (19%), Positives = 116/260 (44%), Gaps = 19/260 (7%)
Query: 41 LTTDLIKSYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRM 96
+ T +I S G + A +LFD+M + DVV +T+++ G + A + M
Sbjct: 179 MYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM 238
Query: 97 LRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCD 156
+ ++P+ T +A++ A E + +++ +I+ +L++ + C +
Sbjct: 239 TKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSI-APNIFTYTSLINGF--CME 295
Query: 157 S-MDRARMVFEDIVTK----NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSF 211
+D AR +F + TK + V++T+LI G+ +++F +M + + ++
Sbjct: 296 GCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITY 355
Query: 212 SIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQ 271
+ + VG + +++ + +++ G N+ N +L C +A F +M +
Sbjct: 356 TTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQK 415
Query: 272 KD-------TITWNTLIAGF 284
++ T+N L+ G
Sbjct: 416 REMDGVAPNIWTYNVLLHGL 435
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 103/241 (42%), Gaps = 15/241 (6%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLR 98
T LI + +G + EA +F M + DVVA+T++I G+ C A K+F M +
Sbjct: 286 TSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQ 345
Query: 99 DGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCD-S 157
G+ N T + ++ +G + +A + + +RG + + ++ C +
Sbjct: 346 KGLTGNTITYTTLI---QGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGK 402
Query: 158 MDRARMVFEDI-------VTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFS 210
+ +A M+FED+ V N ++ L+ G + G L VF M E ++ +
Sbjct: 403 VKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIIT 462
Query: 211 FSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT 270
++I + G L ++ + G + N+ +++ R EA F +M
Sbjct: 463 YTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMK 522
Query: 271 Q 271
+
Sbjct: 523 E 523
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 106/259 (40%), Gaps = 29/259 (11%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTH----RDVVAWTAMITGYTSCNHHSRAWKVFPRMLR 98
T LI Y G ++ A +L+ EM +VV +TA+I G+ RA +++ RM+
Sbjct: 202 TCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVE 261
Query: 99 DGVRPNAFTLSAVLKA------CKGLRALFCGELAHGLAVKIGARGSSI--YVDNALMDM 150
D V PN+ + ++ L G+ + I A G I N +
Sbjct: 262 DRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKE 321
Query: 151 YATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFS 210
+ M+++ +V + V +TT++ Y G + ++ +++ E +
Sbjct: 322 ATEIVEDMEKSDLV------PDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVA 375
Query: 211 FSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSIL-DMYCRCRCASEAKQFFCEM 269
S + A G QLH A++ + VM ++L D C+ E ++ F ++
Sbjct: 376 LSTMIDGIAKNG------QLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKI 429
Query: 270 TQ----KDTITWNTLIAGF 284
++ D + + IAG
Sbjct: 430 SEAGLVPDKFMYTSWIAGL 448
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 110/255 (43%), Gaps = 15/255 (5%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTHRD----VVAWTAMITGYTSCNHH-SRAWKVFPRML 97
T LI ++ + G +EA +F +M ++ + ++ + ++ + +M
Sbjct: 212 TSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMK 271
Query: 98 RDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVD-NALMDMYATCCD 156
DG+ P+A+T + ++ CK R E A A S V NAL+D+Y
Sbjct: 272 SDGIAPDAYTYNTLITCCK--RGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHR 329
Query: 157 SMDRARMVFEDIV---TKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSI 213
+ +++ E ++ + + V++ +LI+ Y G + + QM + + F+++
Sbjct: 330 PKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTT 389
Query: 214 AVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT--- 270
+S G + + N G + N+ N+ + MY +E + F E+
Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCG 449
Query: 271 -QKDTITWNTLIAGF 284
D +TWNTL+A F
Sbjct: 450 LSPDIVTWNTLLAVF 464
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 110/261 (42%), Gaps = 24/261 (9%)
Query: 27 QLNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEM----THRDVVAWTAMITGYTS 82
++ D +P +LT + L+ +Y + I H+L +E+ V ++ +
Sbjct: 549 EMEDGRCKPNELTYCS--LLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSK 606
Query: 83 CNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARG--SS 140
C+ A + F + G P+ TL++++ + G R + A+G+ + RG S
Sbjct: 607 CDLLPEAERAFSELKERGFSPDITTLNSMV-SIYGRRQMVAK--ANGVLDYMKERGFTPS 663
Query: 141 IYVDNALMDMYATCCD---SMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFR 197
+ N+LM M++ D S + R + + + +S+ T+I Y R+F
Sbjct: 664 MATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFS 723
Query: 198 QM-----VLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDM 252
+M V + + F S A + G++ +I HG + N NSI+D
Sbjct: 724 EMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVV-----RYMIKHGCRPNQNTYNSIVDG 778
Query: 253 YCRCRCASEAKQFFCEMTQKD 273
YC+ EAK F ++ D
Sbjct: 779 YCKLNRKDEAKLFVEDLRNLD 799
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 114/262 (43%), Gaps = 28/262 (10%)
Query: 42 TTDLIKSYFDKGSIQEAHTLFDEMTH----RDVVAWTAMITGYTSCNHHSRAWKVFPRML 97
+ L++ +G I+EA L + ++ + A+I A +F RM
Sbjct: 335 VSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMG 394
Query: 98 RDGVRPNAFTLSAVLKACKGLRALFC--GELAHGLA-----VKIGARGSSIYVDNALMDM 150
+ G+RPN T S ++ +FC G+L L+ V G + S+Y N+L++
Sbjct: 395 KIGLRPNDVTYSILID-------MFCRRGKLDTALSFLGEMVDTGLK-LSVYPYNSLING 446
Query: 151 YATCCDSMDRARMVFEDIVTKN----AVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGEL 206
+ D + A +++ K V++T+L+ GY +G LR++ +M +
Sbjct: 447 HCKFGD-ISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAP 505
Query: 207 SPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFF 266
S ++F+ +S G +L + + N N +++ YC S+A +F
Sbjct: 506 SIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFL 565
Query: 267 CEMTQK----DTITWNTLIAGF 284
EMT+K DT ++ LI G
Sbjct: 566 KEMTEKGIVPDTYSYRPLIHGL 587
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 131/305 (42%), Gaps = 51/305 (16%)
Query: 27 QLNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHRDVVA----WTAMITGYTS 82
+L + F P + + T LI KG I++A LF EM +VA +T +I G
Sbjct: 188 ELTEFGFSPNVV--IYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFK 245
Query: 83 CNHHSRAWKVFPRMLRDGVRPNAFTLSAVL-KACKG--------------LRALFC---- 123
+ ++++ +M DGV PN +T + V+ + CK R + C
Sbjct: 246 NGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVT 305
Query: 124 -GELAHGLAVKIGARGSSIYVD-------NALMDMYATCCD------SMDRARMVFEDI- 168
L GL ++ ++ VD N + Y T D + +A + D+
Sbjct: 306 YNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLK 365
Query: 169 ---VTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAVSACASVGS 223
++ + V++ L++G+ +GD G ++ ++M EE + P +++I + A +
Sbjct: 366 SRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM--EERGIKPSKVTYTILIDTFARSDN 423
Query: 224 GILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK----DTITWNT 279
QL ++ G ++ + ++ +C +EA + F M +K + + +NT
Sbjct: 424 MEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNT 483
Query: 280 LIAGF 284
+I G+
Sbjct: 484 MILGY 488
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 113/271 (41%), Gaps = 19/271 (7%)
Query: 27 QLNDSPFRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTS 82
Q+ + + P L T LI+ + +G + A +L DEM D+V + I +
Sbjct: 193 QMQELGYEPT--VHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGK 250
Query: 83 CNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKA-CKGLRALFCGELAHGLAVKIGARGSSI 141
AWK F + +G++P+ T ++++ CK R E+ L + R
Sbjct: 251 VGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL--EKNRRVPCT 308
Query: 142 YVDNALMDMYATCCDSMDRARMVFEDIVTKNA----VSWTTLITGYTHRGDAFGGLRVFR 197
Y N ++ Y + D A + E K + +++ ++T G L+VF
Sbjct: 309 YAYNTMIMGYGS-AGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFE 367
Query: 198 QMVLEEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCR 257
+M ++ + +++I + G +L ++ G N+ +N ++D C+ +
Sbjct: 368 EMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQ 426
Query: 258 CASEAKQFFCEMTQK----DTITWNTLIAGF 284
EA F EM K D IT+ +LI G
Sbjct: 427 KLDEACAMFEEMDYKVCTPDEITFCSLIDGL 457
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 99/246 (40%), Gaps = 20/246 (8%)
Query: 54 SIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLS 109
+ EA +F+EM ++ D + + ++I G A+KV+ +ML R N+ +
Sbjct: 427 KLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYT 486
Query: 110 AVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATC---CDSMDRARMVFE 166
+++K G G + + D L++ Y C ++ R +FE
Sbjct: 487 SLIK-----NFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFE 541
Query: 167 DIVTK----NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASVG 222
+I + +A S++ LI G G A +F M + L +++I + G
Sbjct: 542 EIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCG 601
Query: 223 SGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK----DTITWN 278
QL + GF+ + S++D + EA F E K + + ++
Sbjct: 602 KVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYS 661
Query: 279 TLIAGF 284
+LI GF
Sbjct: 662 SLIDGF 667
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 102/251 (40%), Gaps = 27/251 (10%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMTH----RDVVAWTAMITGYTSCNHHSRAWKVFPRMLR 98
T ++ S+ G I++A F+EM +VV +TA+I Y S A ++F ML
Sbjct: 522 TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLS 581
Query: 99 DGVRPNAFTLSAVLKA-CKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDS 157
+G PN T SA++ CK G++ + GS D +DMY D
Sbjct: 582 EGCLPNIVTYSALIDGHCKA------GQVEKACQIFERMCGSKDVPD---VDMYFKQYD- 631
Query: 158 MDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSA 217
++ N V++ L+ G+ ++ M +E E + + +
Sbjct: 632 --------DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDG 683
Query: 218 CASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK----D 273
VG +++ + HGF + L +S++D Y + + A + +M + +
Sbjct: 684 LCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPN 743
Query: 274 TITWNTLIAGF 284
+ + +I G
Sbjct: 744 VVIYTEMIDGL 754
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 107/281 (38%), Gaps = 78/281 (27%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
LI ++ +G + EA L+DEM R D+ ++++I G+ + A +F M+
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391
Query: 101 VRPNAFTLSAVLKA-CKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD 159
PN T + ++K CK R VD + M+
Sbjct: 392 CFPNVVTYNTLIKGFCKAKR-----------------------VD-----------EGME 417
Query: 160 RARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMV------------------- 200
R + + + N V++TTLI G+ + VF+QMV
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC 477
Query: 201 --------------LEEGELSP--FSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLP 244
L+ ++ P ++++I + G G L ++ G + N+
Sbjct: 478 NNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVV 537
Query: 245 VMNSILDMYCRCRCASEAKQFFCEMTQK----DTITWNTLI 281
+++ +CR EA F EM ++ D+ T+NTLI
Sbjct: 538 TYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 104/253 (41%), Gaps = 16/253 (6%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
L+ + I +A +L +M D + +I G N S A + RM+ G
Sbjct: 157 LLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG 216
Query: 101 VRPNAFTLSAVLKACKGLRALFCGELAHGLAVKI--GARGSSIYVDNALMDM---YATCC 155
+P+ T V+ GL +LA L K+ G + + N ++D Y
Sbjct: 217 CQPDLVTYGIVVN---GLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVN 273
Query: 156 DSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAV 215
D+++ + + N V++ +LI + G R+ M+ + + +FS +
Sbjct: 274 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 333
Query: 216 SACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQKD-- 273
A G + ++L+ +I ++ +S+++ +C EAK F M KD
Sbjct: 334 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 393
Query: 274 --TITWNTLIAGF 284
+T+NTLI GF
Sbjct: 394 PNVVTYNTLIKGF 406
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 110/244 (45%), Gaps = 14/244 (5%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEMT----HRDVVAWTAMITGYTSCNHHSRAWKVFPRMLR 98
T+L++ + G I EA +F EM +V ++ +I C SRA VF ML
Sbjct: 259 TNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLD 318
Query: 99 DGVRPNAFTLSAVLKA-CKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCD- 156
G PNA T + +++ K R ++ + + K+G +I N L++ A C D
Sbjct: 319 SGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMK-KLGCEPDTITY-NFLIE--AHCRDE 374
Query: 157 SMDRARMVFEDIVTK----NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFS 212
+++ A V ++ K NA ++ T+ + D G R++ +M+ + E + +++
Sbjct: 375 NLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYN 434
Query: 213 IAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK 272
I + S + ++ + + + N+ ++ M+C + A + F EM ++
Sbjct: 435 ILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEE 494
Query: 273 DTIT 276
+T
Sbjct: 495 KCLT 498
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 112/272 (41%), Gaps = 47/272 (17%)
Query: 70 VVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTLSAVLKAC-------KGLRALF 122
V A++A+I+ Y H A VF M G+RPN T +AV+ AC K + F
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 123 CGELAHGLA---------VKIGARG-------------------SSIYVDNALMDMYATC 154
+G+ + + +RG ++ N L+D A C
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLD--AIC 385
Query: 155 -CDSMDRARMVFEDIVTK----NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPF 209
MD A + + K N VS++T+I G+ G L +F +M L
Sbjct: 386 KGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRV 445
Query: 210 SFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEM 269
S++ +S VG + + + G + ++ N++L Y + E K+ F EM
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM 505
Query: 270 TQK----DTITWNTLIAGFETLD-SKESLCIF 296
++ + +T++TLI G+ KE++ IF
Sbjct: 506 KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIF 537
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 104/247 (42%), Gaps = 20/247 (8%)
Query: 53 GSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTL 108
G + A LFDEMT+R DV ++ ++ A+++ +M + PN +
Sbjct: 353 GLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSY 412
Query: 109 SAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVD----NALMDMYATCC---DSMDRA 161
S V+ G L + R I +D N L+ +Y +++D
Sbjct: 413 STVIDGFAK-----AGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDIL 467
Query: 162 RMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAVSACASV 221
R + + K+ V++ L+ GY +G +VF +M E + ++S + +
Sbjct: 468 REMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKG 527
Query: 222 GSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK----DTITW 277
G ++ + G ++++ + ++++D C+ A EMT++ + +T+
Sbjct: 528 GLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTY 587
Query: 278 NTLIAGF 284
N++I F
Sbjct: 588 NSIIDAF 594
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 126/270 (46%), Gaps = 35/270 (12%)
Query: 53 GSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTL 108
G + +A LFDEM R DV +T++I+ + RA+ +F + G+ P+++T
Sbjct: 308 GKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTY 367
Query: 109 SAVLKA-CKGLRALFCGEL--AHGLAVKIGARGSSI--YVDNALMDMYATCCDSM-DRAR 162
A++ CK GE+ A L ++ ++G +I V N L+D Y C M D A
Sbjct: 368 GALIDGVCK------VGEMGAAEILMNEMQSKGVNITQVVFNTLIDGY--CRKGMVDEAS 419
Query: 163 MVFEDIVTK----NAVSWTTLITGYTHRGDAFGGLR--VFRQMVLEEG--ELSPFSFSIA 214
M+++ + K + + T+ + + +R + + +FR M EG +LS S++
Sbjct: 420 MIYDVMEQKGFQADVFTCNTIASCF-NRLKRYDEAKQWLFRMM---EGGVKLSTVSYTNL 475
Query: 215 VSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK-- 272
+ G+ K+L + + G Q N N ++ YC+ EA++ M
Sbjct: 476 IDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGM 535
Query: 273 --DTITWNTLIAGFETLDS-KESLCIFSLM 299
D+ T+ +LI G D+ E++ +FS M
Sbjct: 536 DPDSYTYTSLIHGECIADNVDEAMRLFSEM 565
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 109/252 (43%), Gaps = 20/252 (7%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
LI + +G + EA L DEM HR D V + +MI G+ N A +F M
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM---- 427
Query: 101 VRPNAFTLSAVLKA-CKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD 159
P+ T + ++ C+ R +L ++ + ++ Y N L+ + D+++
Sbjct: 428 ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTY--NTLIHGFCE-VDNLN 484
Query: 160 RARMVFEDIVTK----NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAV 215
A+ +F+++++ + ++ L+ G+ L +F + + + +L +++I +
Sbjct: 485 AAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIII 544
Query: 216 SACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT----Q 271
L ++ HG + ++ N ++ +C S+A F +M +
Sbjct: 545 HGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHE 604
Query: 272 KDTITWNTLIAG 283
D T+NTLI G
Sbjct: 605 PDNSTYNTLIRG 616
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 109/268 (40%), Gaps = 35/268 (13%)
Query: 53 GSIQEAHTLFDEM--TH--RDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTL 108
G + A L +M TH DVV ++A+I HHS A +F ML G+ PN FT
Sbjct: 275 GDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTY 334
Query: 109 SAVL----------KACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSM 158
+ ++ A + LR + E+ + + A S+ + L + C + +
Sbjct: 335 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDV-LTFNALISASVKEGKLFEAEKLCDEML 393
Query: 159 DRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAVS 216
R +F D VT N+ +I G+ +F M SP +F+ +
Sbjct: 394 HRC--IFPDTVTYNS-----MIYGFCKHNRFDDAKHMFDLMA------SPDVVTFNTIID 440
Query: 217 ACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK---- 272
G QL + G +N N+++ +C + A+ F EM
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500
Query: 273 DTITWNTLIAGF-ETLDSKESLCIFSLM 299
DTIT N L+ GF E +E+L +F ++
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVI 528
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 108/260 (41%), Gaps = 43/260 (16%)
Query: 33 FRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEMT----HRDVVAWTAMITGYTSCNHHSR 88
F P DL T+ L+ Y I++A LFD++ +VV +T +I H +
Sbjct: 149 FEP-DLVTFTS-LLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNH 206
Query: 89 AWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALM 148
A ++F +M +G RPN T +A L GL +IG G + ++ L
Sbjct: 207 AVELFNQMGTNGSRPNVVTYNA---------------LVTGLC-EIGRWGDAAWL---LR 247
Query: 149 DMYATCCDSMDRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP 208
DM M R + N +++T LI + G ++ M+
Sbjct: 248 DM-------MKRR-------IEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDV 293
Query: 209 FSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCE 268
F++ ++ G +Q+ + +G N + +++ +C+ + + + F E
Sbjct: 294 FTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYE 353
Query: 269 MTQK----DTITWNTLIAGF 284
M+QK +TIT+ LI G+
Sbjct: 354 MSQKGVVANTITYTVLIQGY 373
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 115/275 (41%), Gaps = 24/275 (8%)
Query: 33 FRPKDLTGLTTDLIKSYFDKGSIQEAHTLFDEM----THRDVVAWTAMITGYTSCNHHSR 88
F+P +T T LI+ + A LF++M + +VV + A++TG
Sbjct: 184 FKPNVVT--YTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGD 241
Query: 89 AWKVFPRMLRDGVRPNAFTLSAVLKACKGLRALFCGELAHGLAVKIGARGSSIYVDNALM 148
A + M++ + PN T +A++ A + L + + + +++ ++ +L+
Sbjct: 242 AAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVY-PDVFTYGSLI 300
Query: 149 D---MYATCCDSMDRARMVF----EDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVL 201
+ MY +D AR +F + N V +TTLI G+ G+++F +M
Sbjct: 301 NGLCMYGL----LDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQ 356
Query: 202 EEGELSPFSFSIAVSACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASE 261
+ + ++++ + VG + +++ + + ++ N +LD C C E
Sbjct: 357 KGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLC-CNGKVE 415
Query: 262 AKQFFCEMTQK-----DTITWNTLIAGFETLDSKE 291
E +K + +T+ +I G L E
Sbjct: 416 KALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVE 450
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 109/252 (43%), Gaps = 20/252 (7%)
Query: 45 LIKSYFDKGSIQEAHTLFDEMTHR----DVVAWTAMITGYTSCNHHSRAWKVFPRMLRDG 100
LI + +G + EA L DEM HR D V + +MI G+ N A +F M
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM---- 427
Query: 101 VRPNAFTLSAVLKA-CKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSMD 159
P+ T + ++ C+ R +L ++ + ++ Y N L+ + D+++
Sbjct: 428 ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTY--NTLIHGFCE-VDNLN 484
Query: 160 RARMVFEDIVTK----NAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSPFSFSIAV 215
A+ +F+++++ + ++ L+ G+ L +F + + + +L +++I +
Sbjct: 485 AAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIII 544
Query: 216 SACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMT----Q 271
L ++ HG + ++ N ++ +C S+A F +M +
Sbjct: 545 HGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHE 604
Query: 272 KDTITWNTLIAG 283
D T+NTLI G
Sbjct: 605 PDNSTYNTLIRG 616
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 109/268 (40%), Gaps = 35/268 (13%)
Query: 53 GSIQEAHTLFDEM--TH--RDVVAWTAMITGYTSCNHHSRAWKVFPRMLRDGVRPNAFTL 108
G + A L +M TH DVV ++A+I HHS A +F ML G+ PN FT
Sbjct: 275 GDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTY 334
Query: 109 SAVL----------KACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMDMYATCCDSM 158
+ ++ A + LR + E+ + + A S+ + L + C + +
Sbjct: 335 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDV-LTFNALISASVKEGKLFEAEKLCDEML 393
Query: 159 DRARMVFEDIVTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELSP--FSFSIAVS 216
R +F D VT N+ +I G+ +F M SP +F+ +
Sbjct: 394 HRC--IFPDTVTYNS-----MIYGFCKHNRFDDAKHMFDLMA------SPDVVTFNTIID 440
Query: 217 ACASVGSGILGKQLHAAVINHGFQSNLPVMNSILDMYCRCRCASEAKQFFCEMTQK---- 272
G QL + G +N N+++ +C + A+ F EM
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500
Query: 273 DTITWNTLIAGF-ETLDSKESLCIFSLM 299
DTIT N L+ GF E +E+L +F ++
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVI 528
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 119/268 (44%), Gaps = 43/268 (16%)
Query: 43 TDLIKSYFDKGSIQEAHTLFDEM----THRDVVAWTAMITGYTSCNHHSRAWKVFPRMLR 98
T LI + G++ +A L +EM +VV +TA+I G A ++F +M
Sbjct: 406 TSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDT 465
Query: 99 DGVRPNAFTLSAVL----KACKGLRALFCGELAHGLAVKIGARGSSIYVDNALMD--MYA 152
GV PN + +A++ KA RAL EL + L +G I D L ++
Sbjct: 466 AGVIPNLASYNALIHGFVKAKNMDRAL---ELLNEL------KGRGIKPDLLLYGTFIWG 516
Query: 153 TC-CDSMDRARMVFEDI----VTKNAVSWTTLITGYTHRGDAFGGLRVFRQMVLEEGELS 207
C + ++ A++V ++ + N++ +TTL+ Y G+ GL + +M + E++
Sbjct: 517 LCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVT 576
Query: 208 PFSFSIAVSACASVGSGILGKQLHAAVINH--------GFQSNLPVMNSILDMYCRCRCA 259
+F + + G+ +L + +++ G Q+N + +++D C+
Sbjct: 577 VVTFCVLI-------DGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQV 629
Query: 260 SEAKQFFCEMTQK----DTITWNTLIAG 283
A F +M QK D + +L+ G
Sbjct: 630 EAATTLFEQMVQKGLVPDRTAYTSLMDG 657