Miyakogusa Predicted Gene
- Lj5g3v1529870.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1529870.1 Non Chatacterized Hit- tr|D5AD86|D5AD86_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,23.5,2e-18,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; PPR_3,Pentatricopeptide repeat; DYW_de,CUFF.55397.1
(668 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 543 e-154
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 542 e-154
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 523 e-148
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 521 e-148
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 488 e-138
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 488 e-138
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 487 e-137
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 476 e-134
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 474 e-134
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 474 e-134
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 472 e-133
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 471 e-133
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 462 e-130
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 461 e-129
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 456 e-128
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 454 e-127
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 453 e-127
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 451 e-127
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 449 e-126
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 447 e-126
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 444 e-125
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 442 e-124
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 430 e-120
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 429 e-120
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 428 e-120
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 427 e-120
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 427 e-119
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 427 e-119
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 426 e-119
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 422 e-118
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 421 e-117
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 419 e-117
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 419 e-117
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 416 e-116
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 416 e-116
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 414 e-116
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 414 e-116
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 414 e-115
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 413 e-115
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 413 e-115
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 412 e-115
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 412 e-115
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 409 e-114
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 406 e-113
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 406 e-113
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 405 e-113
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 405 e-113
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 405 e-113
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 402 e-112
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 402 e-112
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 401 e-111
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 400 e-111
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 400 e-111
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 398 e-111
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 398 e-111
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 395 e-110
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 390 e-108
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 390 e-108
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 389 e-108
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 386 e-107
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 385 e-107
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 382 e-106
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 382 e-106
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 381 e-106
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 381 e-106
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 380 e-105
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 380 e-105
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 379 e-105
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 379 e-105
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 376 e-104
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 376 e-104
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 376 e-104
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 375 e-104
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 374 e-103
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 372 e-103
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 365 e-101
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 365 e-101
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 364 e-100
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 361 e-100
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 360 2e-99
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 359 3e-99
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 358 5e-99
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 358 7e-99
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 357 1e-98
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 357 2e-98
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 353 2e-97
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 353 2e-97
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 346 3e-95
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 342 4e-94
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 340 1e-93
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 340 2e-93
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 339 4e-93
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 338 5e-93
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 338 6e-93
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 338 7e-93
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 338 9e-93
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 335 4e-92
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 334 1e-91
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 333 2e-91
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 333 3e-91
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 331 1e-90
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 330 2e-90
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 328 7e-90
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 2e-89
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 318 6e-87
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 315 8e-86
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 313 2e-85
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 312 6e-85
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 311 9e-85
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 310 2e-84
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 308 6e-84
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 2e-83
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 304 1e-82
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 2e-82
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 2e-82
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 2e-81
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 300 2e-81
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 2e-81
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 299 4e-81
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 9e-80
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 292 4e-79
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 5e-79
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 8e-79
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 1e-78
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 288 1e-77
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 287 1e-77
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 2e-77
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 5e-77
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 284 1e-76
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 2e-76
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 283 3e-76
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 282 4e-76
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 5e-76
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 9e-76
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 9e-76
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 281 1e-75
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 1e-75
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 2e-75
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 9e-75
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 1e-74
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 2e-74
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 277 2e-74
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 3e-74
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 276 3e-74
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 3e-74
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 5e-74
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 1e-73
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 273 3e-73
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 6e-73
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 3e-72
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 269 5e-72
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 268 6e-72
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 7e-72
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 268 7e-72
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 1e-71
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 1e-71
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 6e-71
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 2e-70
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 4e-70
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 5e-70
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 1e-69
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 3e-69
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 3e-69
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 6e-69
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 1e-68
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 5e-68
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 3e-67
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 253 4e-67
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 4e-67
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 4e-67
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 9e-67
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 1e-66
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 3e-65
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 246 4e-65
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 9e-65
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 3e-64
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 240 3e-63
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 1e-62
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 5e-62
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 8e-62
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 8e-62
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 2e-61
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 9e-60
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 4e-59
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 1e-58
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 7e-58
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 1e-57
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 2e-57
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 4e-57
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 2e-56
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 2e-56
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 2e-56
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 1e-55
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 4e-53
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 4e-52
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 1e-50
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 6e-47
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 178 1e-44
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 167 2e-41
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 6e-37
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 4e-28
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 121 1e-27
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 1e-26
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 2e-26
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 2e-26
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 3e-26
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 3e-26
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 7e-26
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 3e-25
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 6e-25
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 8e-25
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 8e-25
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 1e-24
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 111 1e-24
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 2e-24
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 4e-24
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 4e-24
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 5e-24
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 7e-24
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 108 1e-23
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 107 3e-23
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 5e-23
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 6e-23
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 6e-23
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 8e-23
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 105 1e-22
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 3e-22
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 5e-22
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 102 1e-21
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 1e-21
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 102 1e-21
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 5e-21
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 7e-21
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 7e-21
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 1e-20
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 1e-20
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 98 2e-20
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 3e-20
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 97 3e-20
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 5e-20
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 5e-20
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 5e-20
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 6e-20
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 1e-19
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 1e-19
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 2e-19
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 2e-19
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 3e-19
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 4e-19
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 5e-19
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 6e-19
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 7e-19
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 4e-18
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 5e-18
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 88 2e-17
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 3e-17
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 6e-17
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 85 1e-16
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 4e-16
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 8e-16
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 82 1e-15
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 82 1e-15
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 2e-15
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 81 3e-15
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 81 3e-15
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 6e-15
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 79 1e-14
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 6e-14
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 76 8e-14
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 75 2e-13
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 74 4e-13
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 7e-13
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 72 9e-13
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 72 1e-12
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 2e-12
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 71 3e-12
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 69 1e-11
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 68 2e-11
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 3e-11
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 9e-11
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 66 9e-11
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 1e-10
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 65 1e-10
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 65 2e-10
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-10
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 64 5e-10
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 6e-10
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-09
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-08
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 57 4e-08
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 56 7e-08
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-07
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 6e-07
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 51 3e-06
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 543 bits (1398), Expect = e-154, Method: Compositional matrix adjust.
Identities = 272/631 (43%), Positives = 398/631 (63%), Gaps = 24/631 (3%)
Query: 43 SLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTL--ATKVFDCIPRPNVFVCN 100
+++ L Q HA+ +K+ D + +L+ A + ++ L A K+F+ +P+ N F N
Sbjct: 35 TIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWN 94
Query: 101 IYLKGSIENGEPHK--AISCYHKMMVLN-SRPNKFTYPTLFKACAVTGSVKEGVQFHAFV 157
++G E+ E AI+ +++MM PN+FT+P++ KACA TG ++EG Q H
Sbjct: 95 TIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLA 154
Query: 158 VKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEA 217
+K G GD + S ++MY G ++AR +L + D++ M D + GE+
Sbjct: 155 LKYGFGGDEFVMSNLVRMYVMCGFMKDAR-VLFYKNIIEKDMV---VMTDRRKRDGEIVL 210
Query: 218 ANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCF 277
WN MI G R G + AR LFD+M +R +SW+ +I GY F
Sbjct: 211 ---------------WNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFF 255
Query: 278 KEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTAL 337
K+A+EVF +M++ I+P+ L S+L + +GSL+ G W+H + E + I++D VLG+AL
Sbjct: 256 KDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSAL 315
Query: 338 IDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNG 397
IDMY KCG ++ A VFE++ V TW+AMI G AIHG+A DA+ F KM +P+
Sbjct: 316 IDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSD 375
Query: 398 VTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIE 457
V ++ +L AC+H G+VE G F+ M V +EP +EH+GC+VDLLGR+GL++EAE+FI
Sbjct: 376 VAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFIL 435
Query: 458 SMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDD 517
+MP+KP+ +W ALL ACR+ GNVE+G+RV IL+DM P +SG Y LSN+YA G W +
Sbjct: 436 NMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSE 495
Query: 518 VARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGY 577
V+ +R MKE+ I PG S++D+ G +HEF + D SHP+ KEI ML ++ DKL++ GY
Sbjct: 496 VSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGY 555
Query: 578 SPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFKL 637
P T+ V ++EEE+KE VL HSEKIA AFGL+ PG + IVKNLR+C DCHS+ KL
Sbjct: 556 RPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKL 615
Query: 638 VSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
+SK+Y I +RDR R+HHF++G CSC D+W
Sbjct: 616 ISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 542 bits (1397), Expect = e-154, Method: Compositional matrix adjust.
Identities = 257/626 (41%), Positives = 389/626 (62%), Gaps = 35/626 (5%)
Query: 45 QHLKQAHAIILKTAHFHDHFVSGTLLK-CYANPNFNNFTLATKVFDCIPRPNVFVCNIYL 103
+ LKQ HA +LKT D + L C ++ + + A VFD RP+ F+ N+ +
Sbjct: 28 EELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMI 87
Query: 104 KGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLT 163
+G + EP +++ Y +M+ ++ N +T+P+L KAC+ + +E Q HA + K G
Sbjct: 88 RGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYE 147
Query: 164 GDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFV 223
DV YA N++I+ Y G + A+ +F
Sbjct: 148 NDV---------YAV------------------------NSLINSYAVTGNFKLAHLLFD 174
Query: 224 NMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEV 283
+P+ + SWN++I G + G ++ A TLF +M E++ ISW+ +I GY++ KEAL++
Sbjct: 175 RIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQL 234
Query: 284 FHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVK 343
FH+MQ ++P L + L+ CA +G+L+QG+WIHS++ + I++D+VLG LIDMY K
Sbjct: 235 FHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAK 294
Query: 344 CGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGV 403
CG ++ A EVF+ +K + V W A+I G A HG +A+ F +M KPN +TF V
Sbjct: 295 CGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAV 354
Query: 404 LNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKP 463
L AC++ G+VE G +F SM+R Y ++P +EH+GC+VDLLGRAGL++EA++FI+ MP+KP
Sbjct: 355 LTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKP 414
Query: 464 NVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRK 523
N +WGALL ACRIH N+ELGE +G IL+ ++P + GRY +NI+A +WD A R+
Sbjct: 415 NAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRR 474
Query: 524 LMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSM 583
LMKE+G+ VPG S + + G HEF GD SHP++++I M KL+ GY P
Sbjct: 475 LMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEE 534
Query: 584 VSYD-IEEEEKETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFKLVSKIY 642
+ D ++++E+E ++ QHSEK+A+ +GL+ KPGT + I+KNLRVC DCH KL+SKIY
Sbjct: 535 MLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIY 594
Query: 643 GHNIIMRDRVRYHHFKNGMCSCKDFW 668
+I+MRDR R+HHF++G CSC D+W
Sbjct: 595 KRDIVMRDRTRFHHFRDGKCSCGDYW 620
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 523 bits (1347), Expect = e-148, Method: Compositional matrix adjust.
Identities = 282/741 (38%), Positives = 426/741 (57%), Gaps = 75/741 (10%)
Query: 1 MSTTATNFPSGLKPIEL--SSDQAPSSKLSQKTVLDILNKKCFHSLQHLKQAHAIILKTA 58
+S + PS P SS P + L +L+ C +LQ L+ HA ++K
Sbjct: 3 LSCSPLTVPSSSYPFHFLPSSSDPPYDSIRNHPSLSLLHN-C-KTLQSLRIIHAQMIKIG 60
Query: 59 HFHDHFVSGTLLK-CYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAIS 117
+ ++ L++ C +P+F A VF I PN+ + N +G + +P A+
Sbjct: 61 LHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALK 120
Query: 118 CYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYA 177
Y M+ L PN +T+P + K+CA + + KEG Q H V+K G D+++ ++ I MY
Sbjct: 121 LYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYV 180
Query: 178 SFGLFREARKMLDESGKTQT-----------------------------DVICWNAMIDG 208
G +A K+ D+S DV+ WNAMI G
Sbjct: 181 QNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISG 240
Query: 209 YLKCGEVEAANEVFVNM------PD--------------------KNVGSW--------- 233
Y + G + A E+F +M PD + V W
Sbjct: 241 YAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSN 300
Query: 234 ----NAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQR 289
NA+I ++CG +E A LF+ + +D ISW+ +I GY +KEAL +F +M R
Sbjct: 301 LKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLR 360
Query: 290 EKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVER--NSIQVDAVLGTALIDMYVKCGRL 347
P+ + S+L CA++G++D GRWIH ++++ + + L T+LIDMY KCG +
Sbjct: 361 SGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDI 420
Query: 348 DMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNAC 407
+ A +VF + + +S+WNAMI G A+HGRA+ + LF++M +P+ +TFVG+L+AC
Sbjct: 421 EAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSAC 480
Query: 408 AHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAV 467
+H+GM++ G +F +M + Y++ P++EH+GC++DLLG +GL +EAE+ I M ++P+ +
Sbjct: 481 SHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVI 540
Query: 468 WGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKE 527
W +LL AC++HGNVELGE L+ +EP N G Y LLSNIYA AGRW++VA+ R L+ +
Sbjct: 541 WCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLND 600
Query: 528 RGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYD 587
+G++ VPG S +++ VHEF +GD HP+ +EIY MLE+M L+ G+ P+TS V +
Sbjct: 601 KGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQE 660
Query: 588 IEEEEKETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFKLVSKIYGHNII 647
+EEE KE L+ HSEK+A+AFGL+ KPGT L IVKNLRVC +CH A KL+SKIY II
Sbjct: 661 MEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREII 720
Query: 648 MRDRVRYHHFKNGMCSCKDFW 668
RDR R+HHF++G+CSC D+W
Sbjct: 721 ARDRTRFHHFRDGVCSCNDYW 741
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 521 bits (1343), Expect = e-148, Method: Compositional matrix adjust.
Identities = 255/632 (40%), Positives = 397/632 (62%), Gaps = 39/632 (6%)
Query: 43 SLQHLKQAHAIILKTAHFHDHFVSGTLLK-CYANPNFNNFT----LATKVFDCIPRPNVF 97
S LK H +L+T D FV+ LL C + FN T A +F I PN+F
Sbjct: 24 SFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLF 83
Query: 98 VCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFV 157
V N+ ++ EP KA Y +M+ P+ T+P L KA + V G Q H+ +
Sbjct: 84 VFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQI 143
Query: 158 VKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEA 217
V+ G DV+++ N+++ Y CG + A
Sbjct: 144 VRFGFQNDVYVE---------------------------------NSLVHMYANCGFIAA 170
Query: 218 ANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCF 277
A +F M ++V SW +M++G +CGM+ENAR +FDEM R+ +WS +I+GY K CF
Sbjct: 171 AGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCF 230
Query: 278 KEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTAL 337
++A+++F M+RE + + ++ S+++ CA++G+L+ G + +V ++ + V+ +LGTAL
Sbjct: 231 EKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTAL 290
Query: 338 IDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNG 397
+DM+ +CG ++ A VFE + + +W+++I GLA+HG A AM F++M P
Sbjct: 291 VDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRD 350
Query: 398 VTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIE 457
VTF VL+AC+H G+VE+GL ++ +MK+ + IEP +EH+GC+VD+LGRAG + EAE FI
Sbjct: 351 VTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFIL 410
Query: 458 SMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDD 517
M VKPN + GALL AC+I+ N E+ ERVG +L+ ++P +SG Y LLSNIYA AG+WD
Sbjct: 411 KMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDK 470
Query: 518 VARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSS-HPQMKEIYLMLEKMMDKLQIEG 576
+ +R +MKE+ ++ PG S++++ GK+++F MGD HP+M +I E+++ K+++ G
Sbjct: 471 IESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIG 530
Query: 577 YSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFK 636
Y NT +D++EEEKE+ + HSEK+A+A+G++ KPGTT+ IVKNLRVC DCH+ K
Sbjct: 531 YKGNTGDAFFDVDEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTK 590
Query: 637 LVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
L+S++YG +I+RDR R+HHF+NG+CSC+D+W
Sbjct: 591 LISEVYGRELIVRDRNRFHHFRNGVCSCRDYW 622
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 488 bits (1256), Expect = e-138, Method: Compositional matrix adjust.
Identities = 249/628 (39%), Positives = 378/628 (60%), Gaps = 37/628 (5%)
Query: 43 SLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIY 102
SL + H + +K+A D FV+ +L+ CY + + A KVF I +V N
Sbjct: 146 SLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFS--CGDLDSACKVFTTIKEKDVVSWNSM 203
Query: 103 LKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGL 162
+ G ++ G P KA+ + KM + + + T + ACA +++ G Q +++
Sbjct: 204 INGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYI----- 258
Query: 163 TGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVF 222
E + ++ NAM+D Y KCG +E A +F
Sbjct: 259 ----------------------------EENRVNVNLTLANAMLDMYTKCGSIEDAKRLF 290
Query: 223 VNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALE 282
M +K+ +W M+ G A E AR + + M ++D ++W+A+I Y + EAL
Sbjct: 291 DAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALI 350
Query: 283 VFHQMQREK-IKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMY 341
VFH++Q +K +K ++ L S L+ CA VG+L+ GRWIHS+++++ I+++ + +ALI MY
Sbjct: 351 VFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMY 410
Query: 342 VKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFV 401
KCG L+ + EVF ++ R+V W+AMIGGLA+HG +A+ +F KM KPNGVTF
Sbjct: 411 SKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFT 470
Query: 402 GVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPV 461
V AC+H G+V+ LF+ M+ Y I PE +H+ C+VD+LGR+G +E+A KFIE+MP+
Sbjct: 471 NVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPI 530
Query: 462 KPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARV 521
P+ +VWGALL AC+IH N+ L E LL++EPRN G + LLSNIYAK G+W++V+ +
Sbjct: 531 PPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSEL 590
Query: 522 RKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNT 581
RK M+ G++ PG S +++ G +HEF GD++HP +++Y L ++M+KL+ GY P
Sbjct: 591 RKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEI 650
Query: 582 SMVSYDIEEEE-KETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFKLVSK 640
S V IEEEE KE L HSEK+A+ +GL+ + + ++KNLRVC DCHS KL+S+
Sbjct: 651 SQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQ 710
Query: 641 IYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
+Y II+RDR R+HHF+NG CSC DFW
Sbjct: 711 LYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/470 (26%), Positives = 212/470 (45%), Gaps = 99/470 (21%)
Query: 43 SLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIY 102
SL+ LKQ H +++T F D + + L A +F + A KVFD IP+PN F N
Sbjct: 42 SLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTL 101
Query: 103 LKGSIENGEPHKAISCYHKMMVLNS-RPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQG 161
++ +P +I + M+ + PNK+T+P L KA A S+ G H VK
Sbjct: 102 IRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSA 161
Query: 162 LTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEV 221
+ DV + N++I Y CG++++A +V
Sbjct: 162 VGSDVFVA---------------------------------NSLIHCYFSCGDLDSACKV 188
Query: 222 FVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEAL 281
F + +K+V SWN+MI+G F + G D +AL
Sbjct: 189 FTTIKEKDVVSWNSMING-------------FVQKGSPD------------------KAL 217
Query: 282 EVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMY 341
E+F +M+ E +K S + +L+ CA + +L+ GR + S++E N + V+ L A++DMY
Sbjct: 218 ELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMY 277
Query: 342 VKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAI--------------------------- 374
KCG ++ A +F+ M+ ++ TW M+ G AI
Sbjct: 278 TKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALIS 337
Query: 375 ----HGRAEDAMKLFTKMNGEKR-KPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEI 429
+G+ +A+ +F ++ +K K N +T V L+ACA G +E G + + +K+ + I
Sbjct: 338 AYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK-HGI 396
Query: 430 EPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHG 479
++ + + G +E++ + S+ K +V VW A++ +HG
Sbjct: 397 RMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMHG 445
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 159/328 (48%), Gaps = 9/328 (2%)
Query: 237 ISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQRE-KIKPS 295
++ L+ +E AR +FDE+ + + +W+ +I Y ++ F M E + P+
Sbjct: 71 MAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPN 130
Query: 296 RHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFE 355
++ P ++ A V SL G+ +H ++++ D + +LI Y CG LD A +VF
Sbjct: 131 KYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFT 190
Query: 356 KMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVER 415
+K ++V +WN+MI G G + A++LF KM E K + VT VGVL+ACA +E
Sbjct: 191 TIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEF 250
Query: 416 GLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNAC 475
G + + ++ + + ++D+ + G +E+A++ ++M K NV W +L+
Sbjct: 251 GRQVCSYIEE-NRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNV-TWTTMLDGY 308
Query: 476 RIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARV---RKLMKERGIET 532
I + E V L M ++ + L + Y + G+ ++ V +L K +
Sbjct: 309 AISEDYEAAREV---LNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQ 365
Query: 533 VPGSSMMDMGGKVHEFKMGDSSHPQMKE 560
+ S + +V ++G H +K+
Sbjct: 366 ITLVSTLSACAQVGALELGRWIHSYIKK 393
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 113/259 (43%), Gaps = 14/259 (5%)
Query: 26 KLSQKTVLDILNKKCFH--SLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTL 83
KL+Q T++ L+ C +L+ + H+ I K + V+ L+ Y+ +
Sbjct: 362 KLNQITLVSTLSA-CAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSK--CGDLEK 418
Query: 84 ATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAV 143
+ +VF+ + + +VFV + + G +G ++A+ ++KM N +PN T+ +F AC+
Sbjct: 419 SREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSH 478
Query: 144 TGSVKEGVQ-FHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICW 202
TG V E FH G+ + + + + G +A K + E+ W
Sbjct: 479 TGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFI-EAMPIPPSTSVW 537
Query: 203 NAMIDG---YLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEM--- 256
A++ + E A + + +N G+ + + A+ G EN L M
Sbjct: 538 GALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVT 597
Query: 257 GERDEISWSAI-IDGYIKQ 274
G + E S+I IDG I +
Sbjct: 598 GLKKEPGCSSIEIDGMIHE 616
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 488 bits (1255), Expect = e-138, Method: Compositional matrix adjust.
Identities = 264/669 (39%), Positives = 395/669 (59%), Gaps = 49/669 (7%)
Query: 5 ATNFPSGLKPIELSSDQAPSSKLSQKTVLDILNKKCFHSLQHLKQAHAIILK---TAHFH 61
AT+ P +LS+ +L L +L K S+ + Q HA IL+ H
Sbjct: 8 ATSLPQN----QLSTTATARFRLPPPEKLAVLIDKS-QSVDEVLQIHAAILRHNLLLHPR 62
Query: 62 DHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHK 121
++ L + YA+ +LA +F P++F+ + + NG +A Y +
Sbjct: 63 YPVLNLKLHRAYASHGKIRHSLA--LFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQ 120
Query: 122 MMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGL 181
++ PN+FT+ +L K+C S K G H V+K GL GI Y + GL
Sbjct: 121 LLSSEINPNEFTFSSLLKSC----STKSGKLIHTHVLKFGL---------GIDPYVATGL 167
Query: 182 FREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLA 241
+D Y K G+V +A +VF MP++++ S AMI+ A
Sbjct: 168 ------------------------VDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYA 203
Query: 242 RCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQRE-KIKPSRHLLP 300
+ G +E AR LFD M ERD +SW+ +IDGY + +AL +F ++ E K KP +
Sbjct: 204 KQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVV 263
Query: 301 SMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR 360
+ L+ C+ +G+L+ GRWIH FV+ + I+++ + T LIDMY KCG L+ A VF +
Sbjct: 264 AALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRK 323
Query: 361 EVSTWNAMIGGLAIHGRAEDAMKLFTKMNG-EKRKPNGVTFVGVLNACAHAGMVERGLGL 419
++ WNAMI G A+HG ++DA++LF +M G +P +TF+G L ACAHAG+V G+ +
Sbjct: 324 DIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRI 383
Query: 420 FNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHG 479
F SM + Y I+P++EH+GC+V LLGRAG ++ A + I++M + + +W ++L +C++HG
Sbjct: 384 FESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHG 443
Query: 480 NVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMM 539
+ LG+ + L+ + +NSG Y LLSNIYA G ++ VA+VR LMKE+GI PG S +
Sbjct: 444 DFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTI 503
Query: 540 DMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQ 599
++ KVHEF+ GD H + KEIY ML K+ ++++ GY PNT+ V D+EE EKE L+
Sbjct: 504 EIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQV 563
Query: 600 HSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKN 659
HSE++A+A+GL+ KPG+ L I KNLRVC+DCH+ KL+SKI G I+MRDR R+HHF +
Sbjct: 564 HSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTD 623
Query: 660 GMCSCKDFW 668
G CSC DFW
Sbjct: 624 GSCSCGDFW 632
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 487 bits (1253), Expect = e-137, Method: Compositional matrix adjust.
Identities = 265/710 (37%), Positives = 398/710 (56%), Gaps = 78/710 (10%)
Query: 35 ILNKKCF-HSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPR 93
IL K F SL H+KQ HA IL+T +H ++ L + + N + A VF IP
Sbjct: 15 ILEKLSFCKSLNHIKQLHAHILRTVI--NHKLNSFLFNLSVSSSSINLSYALNVFSSIPS 72
Query: 94 P-NVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQ 152
P V N +L+ + EP I Y ++ + R ++F++ + KA + ++ EG++
Sbjct: 73 PPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGME 132
Query: 153 FHAFVVKQGLTGDVHIKSAGIQMYAS-------------------------------FGL 181
H K D +++ + MYAS FGL
Sbjct: 133 LHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGL 192
Query: 182 FREARKMLDE-------------------SGKT------------------QTDVICWNA 204
EA K+ +E G+T + D A
Sbjct: 193 VDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTA 252
Query: 205 MIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISW 264
++ Y G ++ A E F M +N+ AM+SG ++CG +++A+ +FD+ ++D + W
Sbjct: 253 LVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCW 312
Query: 265 SAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVER 324
+ +I Y++ +EAL VF +M IKP + S+++ CAN+G LD+ +W+HS +
Sbjct: 313 TTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHV 372
Query: 325 NSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKL 384
N ++ + + ALI+MY KCG LD +VFEKM R V +W++MI L++HG A DA+ L
Sbjct: 373 NGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSL 432
Query: 385 FTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLG 444
F +M E +PN VTFVGVL C+H+G+VE G +F SM Y I P++EH+GC+VDL G
Sbjct: 433 FARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFG 492
Query: 445 RAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYAL 504
RA L+ EA + IESMPV NV +WG+L++ACRIHG +ELG+ +L++EP + G L
Sbjct: 493 RANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVL 552
Query: 505 LSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLM 564
+SNIYA+ RW+DV +R++M+E+ + G S +D GK HEF +GD H Q EIY
Sbjct: 553 MSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAK 612
Query: 565 LEKMMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGT------T 618
L++++ KL++ GY P+ V D+EEEEK+ ++ HSEK+AL FGL++ +
Sbjct: 613 LDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGV 672
Query: 619 LHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
+ IVKNLRVC DCH FKLVSK+Y II+RDR R+H +KNG+CSC+D+W
Sbjct: 673 IRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 476 bits (1226), Expect = e-134, Method: Compositional matrix adjust.
Identities = 247/635 (38%), Positives = 376/635 (59%), Gaps = 17/635 (2%)
Query: 43 SLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIY 102
+L+ L Q H + +K D + +G L+ A + A ++ C P P+ F+ N
Sbjct: 17 NLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTL 76
Query: 103 LKGSIENGEPHKAISCYHKMMVLN-SRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQG 161
++G E+ EPH +++ + +MM P+ F++ + KA S++ G Q H +K G
Sbjct: 77 VRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHG 136
Query: 162 LTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEV 221
L + + + I MY G ARK+ DE Q +++ WNA+I + +V A E+
Sbjct: 137 LESHLFVGTTLIGMYGGCGCVEFARKVFDE--MHQPNLVAWNAVITACFRGNDVAGAREI 194
Query: 222 FVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEAL 281
F M +N SWN M++G + G +E+A+ +F EM RD++SWS +I G F E+
Sbjct: 195 FDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESF 254
Query: 282 EVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMY 341
F ++QR + P+ L +L+ C+ GS + G+ +H FVE+ + ALIDMY
Sbjct: 255 LYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMY 314
Query: 342 VKCGRLDMAWEVFEKMK-VREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTF 400
+CG + MA VFE M+ R + +W +MI GLA+HG+ E+A++LF +M P+G++F
Sbjct: 315 SRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISF 374
Query: 401 VGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMP 460
+ +L+AC+HAG++E G F+ MKRVY IEPE+EH+GC+VDL GR+G +++A FI MP
Sbjct: 375 ISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMP 434
Query: 461 VKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVAR 520
+ P VW LL AC HGN+EL E+V L +++P NSG LLSN YA AG+W DVA
Sbjct: 435 IPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVAS 494
Query: 521 VRKLMKERGIETVPGSSMMDMGGKVHEFKMGD-------SSHPQMKEIYLMLEKMMDKLQ 573
+RK M + I+ S++++G +++F G+ +H ++KEI L L+
Sbjct: 495 IRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDE----- 549
Query: 574 IEGYSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHS 633
GY+P + YD+EEEEKE + +HSEK+ALAF L G + IVKNLR+C DCH+
Sbjct: 550 -AGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHA 608
Query: 634 AFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
KL SK+YG I++RDR R+H FK+G CSC+D+W
Sbjct: 609 VMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 474 bits (1221), Expect = e-134, Method: Compositional matrix adjust.
Identities = 245/686 (35%), Positives = 381/686 (55%), Gaps = 45/686 (6%)
Query: 22 APSSKLSQKTVLDILNKKCFHSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNF 81
PS+ + + +++ C ++ HLKQ H ++ HD F+ LLK F
Sbjct: 6 VPSATSKVQQIKTLISVAC--TVNHLKQIHVSLINHHLHHDTFLVNLLLK--RTLFFRQT 61
Query: 82 TLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKAC 141
+ +F PN+F+ N + G + N H+ + + + + FT+P + KAC
Sbjct: 62 KYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKAC 121
Query: 142 AVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVIC 201
S K G+ H+ VVK G DV ++ + +Y+ G +A K+ DE V+
Sbjct: 122 TRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEI--PDRSVVT 179
Query: 202 WNAMIDGYLKCGEVEAANEVF----------------------VNMPDKNVGSW------ 233
W A+ GY G A ++F V++ D + G W
Sbjct: 180 WTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYME 239
Query: 234 -----------NAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALE 282
+++ A+CG +E AR++FD M E+D ++WS +I GY KE +E
Sbjct: 240 EMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIE 299
Query: 283 VFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYV 342
+F QM +E +KP + + L+ CA++G+LD G W S ++R+ + + ALIDMY
Sbjct: 300 LFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYA 359
Query: 343 KCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVG 402
KCG + +EVF++MK +++ NA I GLA +G + + +F + P+G TF+G
Sbjct: 360 KCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLG 419
Query: 403 VLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVK 462
+L C HAG+++ GL FN++ VY ++ +EH+GC+VDL GRAG++++A + I MP++
Sbjct: 420 LLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMR 479
Query: 463 PNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVR 522
PN VWGALL+ CR+ + +L E V L+ +EP N+G Y LSNIY+ GRWD+ A VR
Sbjct: 480 PNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVR 539
Query: 523 KLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTS 582
+M ++G++ +PG S +++ GKVHEF D SHP +IY LE + +++++ G+ P T
Sbjct: 540 DMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTE 599
Query: 583 MVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFKLVSKIY 642
V +D+EEEEKE VL HSEK+A+A GL+ G + +VKNLRVC DCH KL+SKI
Sbjct: 600 FVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKIT 659
Query: 643 GHNIIMRDRVRYHHFKNGMCSCKDFW 668
I++RD R+H F NG CSC D+W
Sbjct: 660 RREIVVRDNNRFHCFTNGSCSCNDYW 685
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 474 bits (1221), Expect = e-134, Method: Compositional matrix adjust.
Identities = 236/628 (37%), Positives = 368/628 (58%), Gaps = 35/628 (5%)
Query: 43 SLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIY 102
+ + ++Q HA + D + G +K A + A ++ D +P +F N
Sbjct: 18 TFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSM 77
Query: 103 LKGSIENGEPHKAISCYHKMMVLNS--RPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQ 160
++ ++ P K+ Y +++ + +P+ +T L +AC + G+Q H +++
Sbjct: 78 IRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRR 137
Query: 161 GLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANE 220
G D H+++ I +YA G +++ ++
Sbjct: 138 GFDNDPHVQTGLISLYAELGC---------------------------------LDSCHK 164
Query: 221 VFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEA 280
VF ++P + AM++ ARCG + AR LF+ M ERD I+W+A+I GY + +EA
Sbjct: 165 VFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREA 224
Query: 281 LEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDM 340
L VFH MQ E +K + + S+L+ C +G+LDQGRW HS++ERN I++ L T L+D+
Sbjct: 225 LNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDL 284
Query: 341 YVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTF 400
Y KCG ++ A EVF M+ + V TW++ + GLA++G E ++LF+ M + PN VTF
Sbjct: 285 YAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTF 344
Query: 401 VGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMP 460
V VL C+ G V+ G F+SM+ + IEP++EH+GC+VDL RAG +E+A I+ MP
Sbjct: 345 VSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMP 404
Query: 461 VKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVAR 520
+KP+ AVW +LL+A R++ N+ELG +L++E N G Y LLSNIYA + WD+V+
Sbjct: 405 MKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSH 464
Query: 521 VRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPN 580
VR+ MK +G+ PG S+M++ G+VHEF +GD SHP+ +I + + + +L++ GY +
Sbjct: 465 VRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKAD 524
Query: 581 TSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFKLVSK 640
T+ V +DI+EEEKE L HSEK A+AFG++ K + IVKNLRVC DCH ++SK
Sbjct: 525 TTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISK 584
Query: 641 IYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
I+ II+RDR R+HHFK+G CSC FW
Sbjct: 585 IFNREIIVRDRNRFHHFKDGHCSCNGFW 612
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 472 bits (1215), Expect = e-133, Method: Compositional matrix adjust.
Identities = 246/662 (37%), Positives = 374/662 (56%), Gaps = 42/662 (6%)
Query: 46 HLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKG 105
LKQ HA +L F+ L+ +A+ +F + T A +VFD +PRP +F N ++G
Sbjct: 36 QLKQIHARLLVLGLQFSGFLITKLI--HASSSFGDITFARQVFDDLPRPQIFPWNAIIRG 93
Query: 106 SIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGD 165
N A+ Y M + P+ FT+P L KAC+ ++ G HA V + G D
Sbjct: 94 YSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDAD 153
Query: 166 VHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM 225
V +++ I +YA AR + + + ++ W A++ Y + GE A E+F M
Sbjct: 154 VFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQM 213
Query: 226 PDKNVG-SWNAMISGL--------------------------------------ARCGMI 246
+V W A++S L A+CG +
Sbjct: 214 RKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQV 273
Query: 247 ENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVC 306
A+ LFD+M + I W+A+I GY K +EA+++FH+M + ++P + S ++ C
Sbjct: 274 ATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISAC 333
Query: 307 ANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWN 366
A VGSL+Q R ++ +V R+ + D + +ALIDM+ KCG ++ A VF++ R+V W+
Sbjct: 334 AQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWS 393
Query: 367 AMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRV 426
AMI G +HGRA +A+ L+ M PN VTF+G+L AC H+GMV G FN M
Sbjct: 394 AMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD- 452
Query: 427 YEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGER 486
++I P+ +H+ CV+DLLGRAG +++A + I+ MPV+P V VWGALL+AC+ H +VELGE
Sbjct: 453 HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEY 512
Query: 487 VGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVH 546
L ++P N+G Y LSN+YA A WD VA VR MKE+G+ G S +++ G++
Sbjct: 513 AAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLE 572
Query: 547 EFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQHSEKIAL 606
F++GD SHP+ +EI +E + +L+ G+ N +D+ +EE E L HSE+IA+
Sbjct: 573 AFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAI 632
Query: 607 AFGLLHAKPGTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKD 666
A+GL+ GT L I KNLR C +CH+A KL+SK+ I++RD R+HHFK+G+CSC D
Sbjct: 633 AYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGD 692
Query: 667 FW 668
+W
Sbjct: 693 YW 694
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 471 bits (1212), Expect = e-133, Method: Compositional matrix adjust.
Identities = 245/671 (36%), Positives = 384/671 (57%), Gaps = 22/671 (3%)
Query: 10 SGLKPIELSSDQAPSSKLSQKTVLDILNKKCFHSLQHLKQAHAIILKTAHFHDHFVSGTL 69
S L +EL + VLD + ++ L+ H+ I+ + + L
Sbjct: 26 SSLPKLELDQKSPQETVFLLGQVLDT-----YPDIRTLRTVHSRIILEDLRCNSSLGVKL 80
Query: 70 LKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRP 129
++ YA+ + A KVFD IP NV + N+ ++ + NG + + + M N RP
Sbjct: 81 MRAYAS--LKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRP 138
Query: 130 NKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKML 189
+ +T+P + KAC+ +G++ G + H K GL+ + + + + MY G EAR +L
Sbjct: 139 DHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVL 198
Query: 190 DESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNV----GSWNAMISGLARCGM 245
DE ++ DV+ WN+++ GY + + A EV M + G+ +++ ++
Sbjct: 199 DE--MSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT-T 255
Query: 246 IENA---RTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSM 302
EN + +F +MG++ +SW+ +I Y+K EA+E++ +M+ + +P + S+
Sbjct: 256 TENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSV 315
Query: 303 LTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREV 362
L C + +L G+ IH ++ER + + +L ALIDMY KCG L+ A +VFE MK R+V
Sbjct: 316 LPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDV 375
Query: 363 STWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNS 422
+W AMI GR DA+ LF+K+ P+ + FV L AC+HAG++E G F
Sbjct: 376 VSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKL 435
Query: 423 MKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVE 482
M Y+I P +EH C+VDLLGRAG V+EA +FI+ M ++PN VWGALL ACR+H + +
Sbjct: 436 MTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTD 495
Query: 483 LGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMG 542
+G L + P SG Y LLSNIYAKAGRW++V +R +MK +G++ PG+S +++
Sbjct: 496 IGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVN 555
Query: 543 GKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQHSE 602
+H F +GD SHPQ EIY L+ ++ K++ GY P++ +D+EEE+KET L HSE
Sbjct: 556 RIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSE 615
Query: 603 KIALAFGLLHAK-----PGTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHF 657
K+A+ F L++ K T+ I KNLR+C DCH A KL+S+I II+RD R+H F
Sbjct: 616 KLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVF 675
Query: 658 KNGMCSCKDFW 668
+ G+CSC D+W
Sbjct: 676 RFGVCSCGDYW 686
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 462 bits (1190), Expect = e-130, Method: Compositional matrix adjust.
Identities = 229/612 (37%), Positives = 364/612 (59%), Gaps = 33/612 (5%)
Query: 84 ATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYH-------------------KMMV 124
A VFD +P N N L ++N + +A + K +
Sbjct: 176 ARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKI 235
Query: 125 LNSRP--------NKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMY 176
+ +R + ++ T+ A +G + E Q + + DV +A + Y
Sbjct: 236 VEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQ----LFDESPVQDVFTWTAMVSGY 291
Query: 177 ASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAM 236
+ EAR++ D+ + + + WNAM+ GY++ +E A E+F MP +NV +WN M
Sbjct: 292 IQNRMVEEARELFDK--MPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTM 349
Query: 237 ISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSR 296
I+G A+CG I A+ LFD+M +RD +SW+A+I GY + EAL +F QM+RE + +R
Sbjct: 350 ITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNR 409
Query: 297 HLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEK 356
S L+ CA+V +L+ G+ +H + + + +G AL+ MY KCG ++ A ++F++
Sbjct: 410 SSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKE 469
Query: 357 MKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERG 416
M +++ +WN MI G + HG E A++ F M E KP+ T V VL+AC+H G+V++G
Sbjct: 470 MAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKG 529
Query: 417 LGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACR 476
F +M + Y + P +H+ C+VDLLGRAGL+E+A +++MP +P+ A+WG LL A R
Sbjct: 530 RQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASR 589
Query: 477 IHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGS 536
+HGN EL E + MEP NSG Y LLSN+YA +GRW DV ++R M+++G++ VPG
Sbjct: 590 VHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGY 649
Query: 537 SMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKETV 596
S +++ K H F +GD HP+ EI+ LE++ +++ GY TS+V +D+EEEEKE +
Sbjct: 650 SWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERM 709
Query: 597 LKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHH 656
++ HSE++A+A+G++ G + ++KNLRVC DCH+A K +++I G II+RD R+HH
Sbjct: 710 VRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHH 769
Query: 657 FKNGMCSCKDFW 668
FK+G CSC D+W
Sbjct: 770 FKDGSCSCGDYW 781
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/474 (25%), Positives = 205/474 (43%), Gaps = 124/474 (26%)
Query: 173 IQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGS 232
I Y G F ARK+ DE + D++ WN MI GY++ + A E+F MP+++V S
Sbjct: 102 ISGYLRNGEFELARKLFDE--MPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCS 159
Query: 233 WNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQ------ 286
WN M+SG A+ G +++AR++FD M E++++SW+A++ Y++ +EA +F
Sbjct: 160 WNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL 219
Query: 287 ----------MQREKIKPSRHLLPSM-----------LTVCANVGSLDQGR--------- 316
++++KI +R SM +T A G +D+ R
Sbjct: 220 VSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQ 279
Query: 317 ----W---IHSFV----------------ERNSIQVDAVLG------------------- 334
W + ++ ERN + +A+L
Sbjct: 280 DVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMP 339
Query: 335 -------TALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTK 387
+I Y +CG++ A +F+KM R+ +W AMI G + G + +A++LF +
Sbjct: 340 CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQ 399
Query: 388 MNGEKRKPNGVTFVGVLNACA-----------HAGMVERGL--GLF------------NS 422
M E + N +F L+ CA H +V+ G G F S
Sbjct: 400 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 459
Query: 423 MKRVYEIEPEME-----HFGCVVDLLGRAGLVEEAEKFIESMP---VKPNVAVWGALLNA 474
++ ++ EM + ++ R G E A +F ESM +KP+ A A+L+A
Sbjct: 460 IEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSA 519
Query: 475 CRIHGNVELGERVGWILLD---MEPRNSGRYALLSNIYAKAGRWDDVARVRKLM 525
C G V+ G + + + + P NS YA + ++ +AG +D + K M
Sbjct: 520 CSHTGLVDKGRQYFYTMTQDYGVMP-NSQHYACMVDLLGRAGLLEDAHNLMKNM 572
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 179/400 (44%), Gaps = 29/400 (7%)
Query: 164 GDVHIK--SAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEV 221
GD IK + I Y G EA ++ + + + +N MI GYL+ GE E A ++
Sbjct: 60 GDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSS--VSYNGMISGYLRNGEFELARKL 117
Query: 222 FVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEAL 281
F MP++++ SWN MI G R + AR LF+ M ERD SW+ ++ GY + C +A
Sbjct: 118 FDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDAR 177
Query: 282 EVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMY 341
VF +M P ++ + + A V + F R + + V L+ +
Sbjct: 178 SVFDRM------PEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL--VSWNCLLGGF 229
Query: 342 VKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFV 401
VK ++ A + F+ M VR+V +WN +I G A G+ ++A +LF E + T+
Sbjct: 230 VKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFD----ESPVQDVFTWT 285
Query: 402 GVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPV 461
+++ MVE LF+ M E+ G V + +E A++ + MP
Sbjct: 286 AMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYV-----QGERMEMAKELFDVMPC 340
Query: 462 KPNVAVWGALLNACRIHGNVELGERVGWILLDMEP-RNSGRYALLSNIYAKAGRWDDVAR 520
+ NV+ W ++ G + + L D P R+ +A + Y+++G + R
Sbjct: 341 R-NVSTWNTMITGYAQCGKISEAKN----LFDKMPKRDPVSWAAMIAGYSQSGHSFEALR 395
Query: 521 VRKLMKERG--IETVPGSSMMDMGGKVHEFKMGDSSHPQM 558
+ M+ G + SS + V ++G H ++
Sbjct: 396 LFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRL 435
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 461 bits (1185), Expect = e-129, Method: Compositional matrix adjust.
Identities = 230/612 (37%), Positives = 371/612 (60%), Gaps = 52/612 (8%)
Query: 67 GTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIEN---GEPHKAISCYHKMM 123
G + YANP F+ L + F + NI ++ + N + H IS Y +M
Sbjct: 4 GAAIIAYANPIFHIRHLKLESF---------LWNIIIRAIVHNVSSPQRHSPISVYLRMR 54
Query: 124 VLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFR 183
P+ T+P L + + G + HA ++ GL D ++++ + MY+S
Sbjct: 55 NHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSS----- 109
Query: 184 EARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARC 243
CG++ +A VF + K++ +WN++++ A+
Sbjct: 110 ----------------------------CGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKA 141
Query: 244 GMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREK-----IKPSRHL 298
G+I++AR LFDEM ER+ ISWS +I+GY+ +KEAL++F +MQ K ++P+
Sbjct: 142 GLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFT 201
Query: 299 LPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKM- 357
+ ++L+ C +G+L+QG+W+H+++++ +++D VLGTALIDMY KCG L+ A VF +
Sbjct: 202 MSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALG 261
Query: 358 KVREVSTWNAMIGGLAIHGRAEDAMKLFTKMN-GEKRKPNGVTFVGVLNACAHAGMVERG 416
++V ++AMI LA++G ++ +LF++M + PN VTFVG+L AC H G++ G
Sbjct: 262 SKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEG 321
Query: 417 LGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACR 476
F M + I P ++H+GC+VDL GR+GL++EAE FI SMP++P+V +WG+LL+ R
Sbjct: 322 KSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSR 381
Query: 477 IHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGS 536
+ G+++ E L++++P NSG Y LLSN+YAK GRW +V +R M+ +GI VPG
Sbjct: 382 MLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGC 441
Query: 537 SMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKETV 596
S +++ G VHEF +GD S + + IY ML+++M +L+ GY +T V D+ E++KE
Sbjct: 442 SYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIA 501
Query: 597 LKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHH 656
L HSEK+A+AF L+ +PGT + I+KNLR+C DCH K++SK++ I++RD R+HH
Sbjct: 502 LSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHH 561
Query: 657 FKNGMCSCKDFW 668
F++G CSC+DFW
Sbjct: 562 FRDGSCSCRDFW 573
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 456 bits (1174), Expect = e-128, Method: Compositional matrix adjust.
Identities = 229/591 (38%), Positives = 353/591 (59%), Gaps = 34/591 (5%)
Query: 79 NNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLF 138
N +A ++FD N+ +CN + G +A+ ++ MM RP++ + +
Sbjct: 285 NAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAI 344
Query: 139 KACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTD 198
+C+ ++ G H +V++ G D
Sbjct: 345 SSCSQLRNILWGKSCHGYVLRNGFE--------------------------------SWD 372
Query: 199 VICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGE 258
IC NA+ID Y+KC + A +F M +K V +WN++++G G ++ A F+ M E
Sbjct: 373 NIC-NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPE 431
Query: 259 RDEISWSAIIDGYIKQRCFKEALEVFHQMQ-REKIKPSRHLLPSMLTVCANVGSLDQGRW 317
++ +SW+ II G ++ F+EA+EVF MQ +E + + S+ + C ++G+LD +W
Sbjct: 432 KNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKW 491
Query: 318 IHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGR 377
I+ ++E+N IQ+D LGT L+DM+ +CG + A +F + R+VS W A IG +A+ G
Sbjct: 492 IYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGN 551
Query: 378 AEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFG 437
AE A++LF M + KP+GV FVG L AC+H G+V++G +F SM +++ + PE H+G
Sbjct: 552 AERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYG 611
Query: 438 CVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPR 497
C+VDLLGRAGL+EEA + IE MP++PN +W +LL ACR+ GNVE+ + + P
Sbjct: 612 CMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPE 671
Query: 498 NSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQ 557
+G Y LLSN+YA AGRW+D+A+VR MKE+G+ PG+S + + GK HEF GD SHP+
Sbjct: 672 RTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPE 731
Query: 558 MKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGT 617
M I ML+++ + G+ P+ S V D++E+EK +L +HSEK+A+A+GL+ + GT
Sbjct: 732 MPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGT 791
Query: 618 TLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
T+ IVKNLRVC+DCHS K SK+Y II+RD R+H+ + G CSC DFW
Sbjct: 792 TIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 132/545 (24%), Positives = 238/545 (43%), Gaps = 97/545 (17%)
Query: 1 MSTTATNFPSGLKPIELSSDQAPSSKLSQKTVLDILNKKCFHSLQHLKQAHAIILKTAHF 60
++TT T PS L +Q+ +K + ++ K C ++ LK H + K
Sbjct: 15 LATTTTTKPSLL-------NQSKCTKATPSSL-----KNC-KTIDELKMFHRSLTKQGLD 61
Query: 61 HDHFVSGTLLKCYANP----NFNNFTLATKVFD-CIPRPNVFVCNIYLKGSIENGEPHKA 115
+D T+ K A + + A +VF+ F+ N ++G +G ++A
Sbjct: 62 ND---VSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEA 118
Query: 116 ISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQM 175
I + +MM P+K+T+P ACA + + G+Q H +VK G D+ ++++ +
Sbjct: 119 ILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHF 178
Query: 176 YASFGLFREARKMLDESGKTQTDVICWNAMIDGY-------------------------- 209
YA G ARK+ DE ++ +V+ W +MI GY
Sbjct: 179 YAECGELDSARKVFDE--MSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNS 236
Query: 210 ----------LKCGEVEAANEVFVNMPDKNVGSWNAMISGLA----RCGMIENARTLFDE 255
K ++E +V+ + + + + M+S L +C I+ A+ LFDE
Sbjct: 237 VTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDE 296
Query: 256 MGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQG 315
G + +A+ Y++Q +EAL VF+ M ++P R + S ++ C+ + ++ G
Sbjct: 297 YGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWG 356
Query: 316 RWIHSFVERNSIQVDAVLGTALIDMYVKC------------------------------- 344
+ H +V RN + + ALIDMY+KC
Sbjct: 357 KSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVEN 416
Query: 345 GRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNG-EKRKPNGVTFVGV 403
G +D AWE FE M + + +WN +I GL E+A+++F M E +GVT + +
Sbjct: 417 GEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSI 476
Query: 404 LNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKP 463
+AC H G ++ ++ +++ I+ ++ +VD+ R G E A S+ +
Sbjct: 477 ASACGHLGALDLAKWIYYYIEK-NGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR- 534
Query: 464 NVAVW 468
+V+ W
Sbjct: 535 DVSAW 539
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 454 bits (1168), Expect = e-127, Method: Compositional matrix adjust.
Identities = 242/660 (36%), Positives = 365/660 (55%), Gaps = 44/660 (6%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSI 107
K+ H +++K+ D F L YA N A KVFD +P ++ N + G
Sbjct: 155 KEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVN--EARKVFDRMPERDLVSWNTIVAGYS 212
Query: 108 ENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVH 167
+NG A+ M N +P+ T ++ A + + G + H + ++ G V+
Sbjct: 213 QNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVN 272
Query: 168 IKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM-- 225
I +A + MYA G AR++ D G + +V+ WN+MID Y++ + A +F M
Sbjct: 273 ISTALVDMYAKCGSLETARQLFD--GMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLD 330
Query: 226 -------------------------------------PDKNVGSWNAMISGLARCGMIEN 248
D+NV N++IS +C ++
Sbjct: 331 EGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDT 390
Query: 249 ARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCAN 308
A ++F ++ R +SW+A+I G+ + +AL F QM+ +KP S++T A
Sbjct: 391 AASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAE 450
Query: 309 VGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAM 368
+ +WIH V R+ + + + TAL+DMY KCG + +A +F+ M R V+TWNAM
Sbjct: 451 LSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAM 510
Query: 369 IGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYE 428
I G HG + A++LF +M KPNGVTF+ V++AC+H+G+VE GL F MK Y
Sbjct: 511 IDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYS 570
Query: 429 IEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVG 488
IE M+H+G +VDLLGRAG + EA FI MPVKP V V+GA+L AC+IH NV E+
Sbjct: 571 IELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAA 630
Query: 489 WILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEF 548
L ++ P + G + LL+NIY A W+ V +VR M +G+ PG SM+++ +VH F
Sbjct: 631 ERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSF 690
Query: 549 KMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQHSEKIALAF 608
G ++HP K+IY LEK++ ++ GY P+T++V +E + KE +L HSEK+A++F
Sbjct: 691 FSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLV-LGVENDVKEQLLSTHSEKLAISF 749
Query: 609 GLLHAKPGTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
GLL+ GTT+H+ KNLRVCADCH+A K +S + G I++RD R+HHFKNG CSC D+W
Sbjct: 750 GLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 145/565 (25%), Positives = 254/565 (44%), Gaps = 93/565 (16%)
Query: 35 ILNKKCFHSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRP 94
+L ++C SL+ L+Q ++ K + +HF L+ + + + A +VF+ I
Sbjct: 42 LLLERC-SSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCR--YGSVDEAARVFEPIDSK 98
Query: 95 NVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFH 154
+ + LKG + + KA+ + +M + P + + L K C ++ G + H
Sbjct: 99 LNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIH 158
Query: 155 AFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGE 214
+VK G + D+ + MYA EARK+ D + D++ WN ++ GY + G
Sbjct: 159 GLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDR--MPERDLVSWNTIVAGYSQNGM 216
Query: 215 VEAANEVFVNMPDKN---------------------------------------VGSWNA 235
A E+ +M ++N V A
Sbjct: 217 ARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTA 276
Query: 236 MISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPS 295
++ A+CG +E AR LFD M ER+ +SW+++ID Y++ KEA+ +F +M E +KP+
Sbjct: 277 LVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPT 336
Query: 296 RHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFE 355
+ L CA++G L++GR+IH + + + +LI MY KC +D A +F
Sbjct: 337 DVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFG 396
Query: 356 KMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACA------H 409
K++ R + +WNAMI G A +GR DA+ F++M KP+ T+V V+ A A H
Sbjct: 397 KLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHH 456
Query: 410 A----GMVERG------------------LGLFNSMKRVYEI--EPEMEHFGCVVDLLGR 445
A G+V R G + ++++ E + + ++D G
Sbjct: 457 AKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGT 516
Query: 446 AGLVEEAEKFIESM---PVKPNVAVWGALLNACRIHGNVELGERVGWIL-------LDME 495
G + A + E M +KPN + ++++AC G VE G + +++ L M+
Sbjct: 517 HGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMD 576
Query: 496 PRNSGRYALLSNIYAKAGR----WD 516
Y + ++ +AGR WD
Sbjct: 577 -----HYGAMVDLLGRAGRLNEAWD 596
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 453 bits (1165), Expect = e-127, Method: Compositional matrix adjust.
Identities = 244/636 (38%), Positives = 363/636 (57%), Gaps = 68/636 (10%)
Query: 36 LNKKCFHSLQHLKQAHAIILKTAHFHDHFVSG--TLLKCYANPNFNNFTLATKVFDCIPR 93
L K+C H++ KQ HA +K + F+ S L KC + N+ A +F I
Sbjct: 36 LLKRC-HNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDD 94
Query: 94 PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQF 153
P F N ++G + +A+ Y++MM + P+ FTYP L KAC S++EG Q
Sbjct: 95 PCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQI 154
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCG 213
H V K GL DV ++ N++I+ Y +CG
Sbjct: 155 HGQVFKLGLEADVFVQ---------------------------------NSLINMYGRCG 181
Query: 214 EVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIK 273
E+E ++ VF + K SW++M+S A GM WS
Sbjct: 182 EMELSSAVFEKLESKTAASWSSMVSARAGMGM------------------WS-------- 215
Query: 274 QRCFKEALEVFHQMQRE-KIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAV 332
E L +F M E +K + S L CAN G+L+ G IH F+ RN +++ +
Sbjct: 216 -----ECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNII 270
Query: 333 LGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEK 392
+ T+L+DMYVKCG LD A +F+KM+ R T++AMI GLA+HG E A+++F+KM E
Sbjct: 271 VQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEG 330
Query: 393 RKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEA 452
+P+ V +V VLNAC+H+G+V+ G +F M + ++EP EH+GC+VDLLGRAGL+EEA
Sbjct: 331 LEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEA 390
Query: 453 EKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKA 512
+ I+S+P++ N +W L+ CR+ N+ELG+ LL + N G Y L+SN+Y++
Sbjct: 391 LETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQG 450
Query: 513 GRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKL 572
WDDVAR R + +G++ PG S++++ GK H F D SHP+ KEIY ML +M +L
Sbjct: 451 QMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQL 510
Query: 573 QIEGYSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCH 632
+ EGYSP+ + + +++EEEK+ LK HS+K+A+AFGLL+ PG+ + I +NLR+C+DCH
Sbjct: 511 KFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCH 570
Query: 633 SAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
+ K +S IY I++RDR R+H FK G CSCKD+W
Sbjct: 571 TYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 451 bits (1161), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/590 (38%), Positives = 352/590 (59%), Gaps = 34/590 (5%)
Query: 79 NNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLF 138
N +A ++FD N+ +CN + G +A+ ++ MM RP++ + +
Sbjct: 285 NAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAI 344
Query: 139 KACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTD 198
+C+ ++ G H +V++ G D
Sbjct: 345 SSCSQLRNILWGKSCHGYVLRNGFE--------------------------------SWD 372
Query: 199 VICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGE 258
IC NA+ID Y+KC + A +F M +K V +WN++++G G ++ A F+ M E
Sbjct: 373 NIC-NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPE 431
Query: 259 RDEISWSAIIDGYIKQRCFKEALEVFHQMQ-REKIKPSRHLLPSMLTVCANVGSLDQGRW 317
++ +SW+ II G ++ F+EA+EVF MQ +E + + S+ + C ++G+LD +W
Sbjct: 432 KNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKW 491
Query: 318 IHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGR 377
I+ ++E+N IQ+D LGT L+DM+ +CG + A +F + R+VS W A IG +A+ G
Sbjct: 492 IYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGN 551
Query: 378 AEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFG 437
AE A++LF M + KP+GV FVG L AC+H G+V++G +F SM +++ + PE H+G
Sbjct: 552 AERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYG 611
Query: 438 CVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPR 497
C+VDLLGRAGL+EEA + IE MP++PN +W +LL ACR+ GNVE+ + + P
Sbjct: 612 CMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPE 671
Query: 498 NSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQ 557
+G Y LLSN+YA AGRW+D+A+VR MKE+G+ PG+S + + GK HEF GD SHP+
Sbjct: 672 RTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPE 731
Query: 558 MKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGT 617
M I ML+++ + G+ P+ S V D++E+EK +L +HSEK+A+A+GL+ + GT
Sbjct: 732 MPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGT 791
Query: 618 TLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDF 667
T+ IVKNLRVC+DCHS K SK+Y II+RD R+H+ + G CSC DF
Sbjct: 792 TIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 133/545 (24%), Positives = 236/545 (43%), Gaps = 97/545 (17%)
Query: 1 MSTTATNFPSGLKPIELSSDQAPSSKLSQKTVLDILNKKCFHSLQHLKQAHAIILKTAHF 60
++TT T PS L SK ++ T + N K ++ LK H + K
Sbjct: 15 LATTTTTKPSLLN----------QSKCTKATPSSLKNCK---TIDELKMFHRSLTKQGLD 61
Query: 61 HDHFVSGTLLKCYANP----NFNNFTLATKVFD-CIPRPNVFVCNIYLKGSIENGEPHKA 115
+D T+ K A + + A +VF+ F+ N ++G +G ++A
Sbjct: 62 ND---VSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEA 118
Query: 116 ISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQM 175
I + +MM P+K+T+P ACA + + G+Q H +VK G D+ ++++ +
Sbjct: 119 ILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHF 178
Query: 176 YASFGLFREARKMLDESGKTQTDVICWNAMIDGY-------------------------- 209
YA G ARK+ DE ++ +V+ W +MI GY
Sbjct: 179 YAECGELDSARKVFDE--MSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNS 236
Query: 210 ----------LKCGEVEAANEVFVNMPDKNVGSWNAMISGLA----RCGMIENARTLFDE 255
K ++E +V+ + + + + M+S L +C I+ A+ LFDE
Sbjct: 237 VTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDE 296
Query: 256 MGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQG 315
G + +A+ Y++Q +EAL VF+ M ++P R + S ++ C+ + ++ G
Sbjct: 297 YGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWG 356
Query: 316 RWIHSFVERNSIQVDAVLGTALIDMYVKC------------------------------- 344
+ H +V RN + + ALIDMY+KC
Sbjct: 357 KSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVEN 416
Query: 345 GRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNG-EKRKPNGVTFVGV 403
G +D AWE FE M + + +WN +I GL E+A+++F M E +GVT + +
Sbjct: 417 GEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSI 476
Query: 404 LNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKP 463
+AC H G ++ ++ +++ I+ ++ +VD+ R G E A S+ +
Sbjct: 477 ASACGHLGALDLAKWIYYYIEK-NGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR- 534
Query: 464 NVAVW 468
+V+ W
Sbjct: 535 DVSAW 539
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 449 bits (1155), Expect = e-126, Method: Compositional matrix adjust.
Identities = 234/626 (37%), Positives = 360/626 (57%), Gaps = 50/626 (7%)
Query: 91 IPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEG 150
+ + +VF N + +G+ +A+ + M L+ P + ++P KAC+ + G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 151 VQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYL 210
Q H G D+ + SA I MY++ G +ARK+ DE K +++ W +MI GY
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKR--NIVSWTSMIRGYD 153
Query: 211 KCGEVEAANEVFVNMP-------------------------------------------- 226
G A +F ++
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG 213
Query: 227 -DKNVGSWNAMISGLARCGM--IENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEV 283
D+ V N ++ A+ G + AR +FD++ ++D +S+++I+ Y + EA EV
Sbjct: 214 FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEV 273
Query: 284 FHQMQREKIKPSRHL-LPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYV 342
F ++ + K+ + L ++L ++ G+L G+ IH V R ++ D ++GT++IDMY
Sbjct: 274 FRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYC 333
Query: 343 KCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVG 402
KCGR++ A + F++MK + V +W AMI G +HG A A++LF M +PN +TFV
Sbjct: 334 KCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVS 393
Query: 403 VLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVK 462
VL AC+HAG+ G FN+MK + +EP +EH+GC+VDLLGRAG +++A I+ M +K
Sbjct: 394 VLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMK 453
Query: 463 PNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVR 522
P+ +W +LL ACRIH NVEL E L +++ N G Y LLS+IYA AGRW DV RVR
Sbjct: 454 PDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVR 513
Query: 523 KLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTS 582
+MK RG+ PG S++++ G+VH F +GD HPQ ++IY L ++ KL GY NTS
Sbjct: 514 MIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTS 573
Query: 583 MVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFKLVSKIY 642
V +D++EEEKE L+ HSEK+A+AFG+++ PG+T+++VKNLRVC+DCH+ KL+SKI
Sbjct: 574 SVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIV 633
Query: 643 GHNIIMRDRVRYHHFKNGMCSCKDFW 668
++RD R+HHFK+G CSC D+W
Sbjct: 634 DREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 160/384 (41%), Gaps = 54/384 (14%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSI 107
KQ H + D FVS L+ Y+ A KVFD IP+ N+ ++G
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCG--KLEDARKVFDEIPKRNIVSWTSMIRGYD 153
Query: 108 ENGEPHKAISCYHKMMVLNSRPNKFTY------PTLFKACAVTGSVKEGVQFHAFVVKQG 161
NG A+S + ++V + + + ++ AC+ + H+FV+K+G
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG 213
Query: 162 LTGDVHIKSAGIQMYASFGL--FREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAAN 219
V + + + YA G ARK+ D+ D + +N+++ Y + G A
Sbjct: 214 FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQI--VDKDRVSYNSIMSVYAQSGMSNEAF 271
Query: 220 EVFVNMPDKNVGSWNA----------------------------------------MISG 239
EVF + V ++NA +I
Sbjct: 272 EVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDM 331
Query: 240 LARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLL 299
+CG +E AR FD M ++ SW+A+I GY +ALE+F M ++P+
Sbjct: 332 YCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITF 391
Query: 300 PSMLTVCANVGSLDQG-RWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMK 358
S+L C++ G +G RW ++ R ++ ++D+ + G L A+++ ++MK
Sbjct: 392 VSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMK 451
Query: 359 VREVS-TWNAMIGGLAIHGRAEDA 381
++ S W++++ IH E A
Sbjct: 452 MKPDSIIWSSLLAACRIHKNVELA 475
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 144/330 (43%), Gaps = 44/330 (13%)
Query: 247 ENARTLFDEMGER-DEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTV 305
+N TLF+ ++ D SW+++I + EAL F M++ + P+R P +
Sbjct: 26 QNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKA 85
Query: 306 CANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTW 365
C+++ + G+ H Q D + +ALI MY CG+L+ A +VF+++ R + +W
Sbjct: 86 CSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSW 145
Query: 366 NAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTF------VGVLNACAHA---GMVE-- 414
+MI G ++G A DA+ LF + ++ + F V V++AC+ G+ E
Sbjct: 146 TSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESI 205
Query: 415 ----------RGLGLFNSMKRVYE-----------------IEPEMEHFGCVVDLLGRAG 447
RG+ + N++ Y ++ + + ++ + ++G
Sbjct: 206 HSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSG 265
Query: 448 LVEEA----EKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYA 503
+ EA + +++ V N +L A G + +G+ + ++ M +
Sbjct: 266 MSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVG 325
Query: 504 L-LSNIYAKAGRWDDVARVRKLMKERGIET 532
+ ++Y K GR + + MK + + +
Sbjct: 326 TSIIDMYCKCGRVETARKAFDRMKNKNVRS 355
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 447 bits (1151), Expect = e-126, Method: Compositional matrix adjust.
Identities = 222/624 (35%), Positives = 361/624 (57%), Gaps = 5/624 (0%)
Query: 47 LKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGS 106
L+ HA IL+ V+ L+ C + +++L+ +F N FV N ++G
Sbjct: 45 LRHVHAQILRRGVLSSR-VAAQLVSCSSLLKSPDYSLS--IFRNSEERNPFVLNALIRGL 101
Query: 107 IENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDV 166
EN ++ + M+ L +P++ T+P + K+ + G G HA +K + D
Sbjct: 102 TENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDS 161
Query: 167 HIKSAGIQMYASFGLFREARKMLDESGK--TQTDVICWNAMIDGYLKCGEVEAANEVFVN 224
++ + + MYA G + A ++ +ES + ++ WN +I+GY + ++ A +F +
Sbjct: 162 FVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRS 221
Query: 225 MPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVF 284
MP++N GSW+ +I G G + A+ LF+ M E++ +SW+ +I+G+ + ++ A+ +
Sbjct: 222 MPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTY 281
Query: 285 HQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKC 344
+M + +KP+ + + ++L+ C+ G+L G IH ++ N I++D +GTAL+DMY KC
Sbjct: 282 FEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKC 341
Query: 345 GRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVL 404
G LD A VF M +++ +W AMI G A+HGR A++ F +M KP+ V F+ VL
Sbjct: 342 GELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVL 401
Query: 405 NACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPN 464
AC ++ V+ GL F+SM+ Y IEP ++H+ VVDLLGRAG + EA + +E+MP+ P+
Sbjct: 402 TACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPD 461
Query: 465 VAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKL 524
+ W AL AC+ H E V LL+++P G Y L +A G DV + R
Sbjct: 462 LTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLS 521
Query: 525 MKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMV 584
+++R E G S +++ G++++F GD SH +EI L L++++ +GY+P
Sbjct: 522 LQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGYNPGADWS 581
Query: 585 SYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFKLVSKIYGH 644
+DIEEEEKE V HSEK+AL G L PGTT+ I+KNLR+C DCHS K VSKI
Sbjct: 582 IHDIEEEEKENVTGIHSEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLMKYVSKISQR 641
Query: 645 NIIMRDRVRYHHFKNGMCSCKDFW 668
+I++RD ++HHFK+G CSC D+W
Sbjct: 642 DILLRDARQFHHFKDGRCSCGDYW 665
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 444 bits (1142), Expect = e-125, Method: Compositional matrix adjust.
Identities = 238/616 (38%), Positives = 362/616 (58%), Gaps = 39/616 (6%)
Query: 84 ATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAV 143
A KVFD +P NV +KG + NG+ A S + KM NK ++ +
Sbjct: 98 ARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM----PEKNKVSWTVMLIGFLQ 153
Query: 144 TGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDE------------ 191
G + + + + + + D +++ I G EAR++ DE
Sbjct: 154 DGRIDDACKLYEMIPDK----DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTM 209
Query: 192 -SGKTQT----------DV------ICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWN 234
+G Q DV + W +M+ GY++ G +E A E+F MP K V + N
Sbjct: 210 VTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACN 269
Query: 235 AMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKP 294
AMISGL + G I AR +FD M ER++ SW +I + + EAL++F MQ++ ++P
Sbjct: 270 AMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRP 329
Query: 295 SRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVF 354
+ L S+L+VCA++ SL G+ +H+ + R VD + + L+ MY+KCG L + +F
Sbjct: 330 TFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIF 389
Query: 355 EKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMN-GEKRKPNGVTFVGVLNACAHAGMV 413
++ +++ WN++I G A HG E+A+K+F +M KPN VTFV L+AC++AGMV
Sbjct: 390 DRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMV 449
Query: 414 ERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLN 473
E GL ++ SM+ V+ ++P H+ C+VD+LGRAG EA + I+SM V+P+ AVWG+LL
Sbjct: 450 EEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLG 509
Query: 474 ACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETV 533
ACR H +++ E L+++EP NSG Y LLSN+YA GRW DVA +RKLMK R +
Sbjct: 510 ACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKS 569
Query: 534 PGSSMMDMGGKVHEFKMGD-SSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEE 592
PG S ++ KVH F G +SHP+ + I +L+++ L+ GY+P+ S +D++EEE
Sbjct: 570 PGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEE 629
Query: 593 KETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRV 652
K LK HSE++A+A+ LL G + ++KNLRVC+DCH+A K++SK+ II+RD
Sbjct: 630 KVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDAN 689
Query: 653 RYHHFKNGMCSCKDFW 668
R+HHF+NG CSCKD+W
Sbjct: 690 RFHHFRNGECSCKDYW 705
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 168/390 (43%), Gaps = 60/390 (15%)
Query: 173 IQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGS 232
I + G EARK+ D + WN+M+ GY A ++F MPD+N+ S
Sbjct: 24 ITHLSRIGKIHEARKLFDSCDSKS--ISSWNSMVAGYFANLMPRDARKLFDEMPDRNIIS 81
Query: 233 WNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKI 292
WN ++SG + G I+ AR +FD M ER+ +SW+A++ GY+ A +F +M EK
Sbjct: 82 WNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMP-EKN 140
Query: 293 KPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWE 352
K S + ML G +D ++ + D + T++I K GR+D A E
Sbjct: 141 KVSWTV---MLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGLCKEGRVDEARE 193
Query: 353 VFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGM 412
+F++M R V TW M+ G + R +DA K+F M
Sbjct: 194 IFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM------------------------ 229
Query: 413 VERGLGLFNSMKRVYEIEPEMEHFGCVVDLLG--RAGLVEEAEKFIESMPVKPNVAVWGA 470
PE L+G + G +E+AE+ E MPVKP +A A
Sbjct: 230 ------------------PEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIAC-NA 270
Query: 471 LLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGI 530
+++ G + RV M+ RN + + I+ + G + + LM+++G+
Sbjct: 271 MISGLGQKGEIAKARRV---FDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGV 327
Query: 531 E-TVPG-SSMMDMGGKVHEFKMGDSSHPQM 558
T P S++ + + G H Q+
Sbjct: 328 RPTFPTLISILSVCASLASLHHGKQVHAQL 357
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 82/179 (45%), Gaps = 6/179 (3%)
Query: 31 TVLDILNK-KCFHSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFD 89
T++ IL+ SL H KQ HA +++ D +V+ L+ Y + +FD
Sbjct: 333 TLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYI--KCGELVKSKLIFD 390
Query: 90 CIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNS-RPNKFTYPTLFKACAVTGSVK 148
P ++ + N + G +G +A+ + +M + S +PN+ T+ AC+ G V+
Sbjct: 391 RFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVE 450
Query: 149 EGVQ-FHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMI 206
EG++ + + G+ + + M G F EA +M+D S + D W +++
Sbjct: 451 EGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMID-SMTVEPDAAVWGSLL 508
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 442 bits (1137), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/586 (39%), Positives = 341/586 (58%), Gaps = 42/586 (7%)
Query: 84 ATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAV 143
A ++FD IP P+ F NI L + N KA S + +M FK A
Sbjct: 112 AHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMP--------------FKDAAS 157
Query: 144 TGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWN 203
++ G YA G +AR++ + + + WN
Sbjct: 158 WNTMITG-------------------------YARRGEMEKARELF--YSMMEKNEVSWN 190
Query: 204 AMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMG-ERDEI 262
AMI GY++CG++E A+ F P + V +W AMI+G + +E A +F +M ++ +
Sbjct: 191 AMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLV 250
Query: 263 SWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFV 322
+W+A+I GY++ ++ L++F M E I+P+ L S L C+ + +L GR IH V
Sbjct: 251 TWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIV 310
Query: 323 ERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAM 382
++++ D T+LI MY KCG L AW++FE MK ++V WNAMI G A HG A+ A+
Sbjct: 311 SKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKAL 370
Query: 383 KLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDL 442
LF +M K +P+ +TFV VL AC HAG+V G+ F SM R Y++EP+ +H+ C+VDL
Sbjct: 371 CLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDL 430
Query: 443 LGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRY 502
LGRAG +EEA K I SMP +P+ AV+G LL ACR+H NVEL E LL + +N+ Y
Sbjct: 431 LGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGY 490
Query: 503 ALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIY 562
L+NIYA RW+DVARVRK MKE + VPG S +++ KVH F+ D HP++ I+
Sbjct: 491 VQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIH 550
Query: 563 LMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLHIV 622
L+++ K+++ GY P +++EEE+KE +L HSEK+A+AFG + G+ + +
Sbjct: 551 KKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVF 610
Query: 623 KNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
KNLR+C DCH A K +S+I II+RD R+HHFK+G CSC D+W
Sbjct: 611 KNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 150/317 (47%), Gaps = 37/317 (11%)
Query: 196 QTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLAR--CGMIENARTLF 253
Q + N +I ++ G+++ A VF M KN +WN+++ G+++ M+E A LF
Sbjct: 58 QDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMME-AHQLF 116
Query: 254 DEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLD 313
DE+ E D S++ ++ Y++ F++A F +M + +M+T A G ++
Sbjct: 117 DEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAAS----WNTMITGYARRGEME 172
Query: 314 QGRWI-HSFVERNSIQVDAVLG--------------------------TALIDMYVKCGR 346
+ R + +S +E+N + +A++ TA+I Y+K +
Sbjct: 173 KARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKK 232
Query: 347 LDMAWEVFEKMKV-REVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLN 405
+++A +F+ M V + + TWNAMI G + R ED +KLF M E +PN L
Sbjct: 233 VELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALL 292
Query: 406 ACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNV 465
C+ ++ G + + + + ++ ++ + + G + +A K E M K +V
Sbjct: 293 GCSELSALQLGRQIHQIVSKS-TLCNDVTALTSLISMYCKCGELGDAWKLFEVMK-KKDV 350
Query: 466 AVWGALLNACRIHGNVE 482
W A+++ HGN +
Sbjct: 351 VAWNAMISGYAQHGNAD 367
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 430 bits (1105), Expect = e-120, Method: Compositional matrix adjust.
Identities = 231/630 (36%), Positives = 356/630 (56%), Gaps = 37/630 (5%)
Query: 43 SLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIY 102
+L +KQ H +L+ ++ L++ A +V + + N F+
Sbjct: 61 NLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAV 120
Query: 103 LKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGL 162
++G G+ +AI+ Y M P FT+ L KAC + G QFHA
Sbjct: 121 IRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHA------- 173
Query: 163 TGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVF 222
Q + G V N MID Y+KC ++ A +VF
Sbjct: 174 -----------QTFRLRGF---------------CFVYVGNTMIDMYVKCESIDCARKVF 207
Query: 223 VNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALE 282
MP+++V SW +I+ AR G +E A LF+ + +D ++W+A++ G+ + +EALE
Sbjct: 208 DEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALE 267
Query: 283 VFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERN--SIQVDAVLGTALIDM 340
F +M++ I+ + ++ CA +G+ +++ S V+G+ALIDM
Sbjct: 268 YFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDM 327
Query: 341 YVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKR-KPNGVT 399
Y KCG ++ A VF M + V T+++MI GLA HGRA++A+ LF M + KPN VT
Sbjct: 328 YSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVT 387
Query: 400 FVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESM 459
FVG L AC+H+G+V++G +F+SM + + ++P +H+ C+VDLLGR G ++EA + I++M
Sbjct: 388 FVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTM 447
Query: 460 PVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVA 519
V+P+ VWGALL ACRIH N E+ E L ++EP G Y LLSN+YA AG W V
Sbjct: 448 SVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVL 507
Query: 520 RVRKLMKERGIETVPGSS-MMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYS 578
RVRKL+KE+G++ P S ++D G++H+F G+ +HP +I LE+++++L + GY
Sbjct: 508 RVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQ 567
Query: 579 PNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFKLV 638
P+ S V YD+ + K +L QH+EK+ALAF LL +T+ I+KNLR+C DCH +L
Sbjct: 568 PDLSSVPYDVSDNAKRLILIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLA 627
Query: 639 SKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
S++ G IIMRD +R+HHF++G CSC DFW
Sbjct: 628 SEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 429 bits (1103), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/629 (35%), Positives = 348/629 (55%), Gaps = 53/629 (8%)
Query: 84 ATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLN-SRPNKFTYPTLFKACA 142
A KVFD +P + + N + G +N ++I + ++ + +R + T + A A
Sbjct: 173 ARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVA 232
Query: 143 VTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFG-------LFREARKMLDESGKT 195
++ G+Q H+ K G ++ + I +Y+ G LFRE RK
Sbjct: 233 ELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRK-------- 284
Query: 196 QTDVICWNAMIDGYLKCGEVEAANEVF-------VNMPDKNVGSW--------------- 233
D++ +NAMI GY GE E + +F + + S
Sbjct: 285 -PDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHG 343
Query: 234 --------------NAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKE 279
A+ + ++ IE+AR LFDE E+ SW+A+I GY + ++
Sbjct: 344 YCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTED 403
Query: 280 ALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALID 339
A+ +F +MQ+ + P+ + +L+ CA +G+L G+W+H V + + TALI
Sbjct: 404 AISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIG 463
Query: 340 MYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVT 399
MY KCG + A +F+ M + TWN MI G +HG+ ++A+ +F +M P VT
Sbjct: 464 MYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVT 523
Query: 400 FVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESM 459
F+ VL AC+HAG+V+ G +FNSM Y EP ++H+ C+VD+LGRAG ++ A +FIE+M
Sbjct: 524 FLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAM 583
Query: 460 PVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVA 519
++P +VW LL ACRIH + L V L +++P N G + LLSNI++ + A
Sbjct: 584 SIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAA 643
Query: 520 RVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSP 579
VR+ K+R + PG +++++G H F GD SHPQ+KEIY LEK+ K++ GY P
Sbjct: 644 TVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQP 703
Query: 580 NTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFKLVS 639
T + +D+EEEE+E ++K HSE++A+AFGL+ +PGT + I+KNLRVC DCH+ KL+S
Sbjct: 704 ETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLIS 763
Query: 640 KIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
KI I++RD R+HHFK+G+CSC D+W
Sbjct: 764 KITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 168/396 (42%), Gaps = 55/396 (13%)
Query: 25 SKLSQKTVLDILNKKCFHSLQHLK---QAHAIILKTAHF-HDHFVSGTLLKCYANPNFNN 80
++L T+LDIL LQ L+ Q H++ KT + HD+ ++G + Y+
Sbjct: 217 TRLDTTTLLDIL--PAVAELQELRLGMQIHSLATKTGCYSHDYVLTG-FISLYSK--CGK 271
Query: 81 FTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKA 140
+ + +F +P++ N + G NGE ++S + ++M+ +R TL
Sbjct: 272 IKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAR---LRSSTLVSL 328
Query: 141 CAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVI 200
V+G + H + +K + +A +Y+ ARK+ DES + +
Sbjct: 329 VPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDES--PEKSLP 386
Query: 201 CWNAMIDGYLKCGEVEAANEVFVNMPDK----------------------NVGSW----- 233
WNAMI GY + G E A +F M ++G W
Sbjct: 387 SWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLV 446
Query: 234 ------------NAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEAL 281
A+I A+CG I AR LFD M +++E++W+ +I GY +EAL
Sbjct: 447 RSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEAL 506
Query: 282 EVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWI-HSFVERNSIQVDAVLGTALIDM 340
+F++M I P+ +L C++ G + +G I +S + R + ++D+
Sbjct: 507 NIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDI 566
Query: 341 YVKCGRLDMAWEVFEKMKVRE-VSTWNAMIGGLAIH 375
+ G L A + E M + S W ++G IH
Sbjct: 567 LGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIH 602
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 126/551 (22%), Positives = 219/551 (39%), Gaps = 103/551 (18%)
Query: 12 LKPIELSSDQAPSSKLSQKTVLDILNKKCFHSLQHLKQAHAIILKTAHFHDHFVSGTLLK 71
L+ + ++ + ++ +S+ T LD + S+ HL Q HA I+ +D + L +
Sbjct: 3 LRTVSSATAETTAALISKNTYLDFFKRST--SISHLAQTHAQIILHGFRNDISLLTKLTQ 60
Query: 72 CYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCY-HKMMVLNSRPN 130
++ A +F + RP+VF+ N+ ++G N PH ++S + H + +PN
Sbjct: 61 RLSD--LGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPN 118
Query: 131 KFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLD 190
TY F A +G FR+ D
Sbjct: 119 SSTYA--FAISAASG------------------------------------FRD-----D 135
Query: 191 ESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENAR 250
+G+ VI A++DG C V M K W +E+AR
Sbjct: 136 RAGR----VIHGQAVVDG---CDSELLLGSNIVKMYFK---FWR-----------VEDAR 174
Query: 251 TLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREK-IKPSRHLLPSMLTVCANV 309
+FD M E+D I W+ +I GY K + E+++VF + E + L +L A +
Sbjct: 175 KVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAEL 234
Query: 310 GSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMI 369
L G IHS + + T I +Y KCG++ M +F + + ++ +NAMI
Sbjct: 235 QELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMI 294
Query: 370 GGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVL-------------------NACAHA 410
G +G E ++ LF ++ + T V ++ N +HA
Sbjct: 295 HGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHA 354
Query: 411 GM------VERGLGLFNSMKRVYEIEPE--MEHFGCVVDLLGRAGLVEEAEKFIESMP-- 460
+ V L S +++++ PE + + ++ + GL E+A M
Sbjct: 355 SVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKS 414
Query: 461 -VKPNVAVWGALLNACRIHGNVELGERVGWIL--LDMEPRNSGRYALLSNIYAKAGRWDD 517
PN +L+AC G + LG+ V ++ D E AL+ +YAK G +
Sbjct: 415 EFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALI-GMYAKCGSIAE 473
Query: 518 VARVRKLMKER 528
R+ LM ++
Sbjct: 474 ARRLFDLMTKK 484
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 428 bits (1101), Expect = e-120, Method: Compositional matrix adjust.
Identities = 242/705 (34%), Positives = 376/705 (53%), Gaps = 58/705 (8%)
Query: 17 LSSDQAPSSKLSQKTVLDILNKKCFHSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANP 76
L + PSS V N L KQ HA L+ + F+ TL+ Y
Sbjct: 191 LDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVAMYGK- 248
Query: 77 NFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPT 136
+ + ++ N L +N + +A+ +M++ P++FT +
Sbjct: 249 -LGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISS 307
Query: 137 LFKACAVTGSVKEGVQFHAFVVKQG-LTGDVHIKSAGIQMYASFGLFREARKMLDESGKT 195
+ AC+ ++ G + HA+ +K G L + + SA + MY + R++ D G
Sbjct: 308 VLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD--GMF 365
Query: 196 QTDVICWNAMIDGYLKCGEVEAANEVFVNMP----------------------------- 226
+ WNAMI GY + + A +F+ M
Sbjct: 366 DRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKE 425
Query: 227 -----------DKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQR 275
D++ N ++ +R G I+ A +F +M +RD ++W+ +I GY+
Sbjct: 426 AIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSE 485
Query: 276 CFKEALEVFHQMQ-----------REKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVER 324
++AL + H+MQ R +KP+ L ++L CA + +L +G+ IH++ +
Sbjct: 486 HHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIK 545
Query: 325 NSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKL 384
N++ D +G+AL+DMY KCG L M+ +VF+++ + V TWN +I +HG ++A+ L
Sbjct: 546 NNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDL 605
Query: 385 FTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLG 444
M + KPN VTF+ V AC+H+GMV+ GL +F MK Y +EP +H+ CVVDLLG
Sbjct: 606 LRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLG 665
Query: 445 RAGLVEEAEKFIESMPVKPNVA-VWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYA 503
RAG ++EA + + MP N A W +LL A RIH N+E+GE L+ +EP + Y
Sbjct: 666 RAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYV 725
Query: 504 LLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYL 563
LL+NIY+ AG WD VR+ MKE+G+ PG S ++ G +VH+F GDSSHPQ +++
Sbjct: 726 LLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSG 785
Query: 564 MLEKMMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLHIVK 623
LE + ++++ EGY P+TS V +++EE+EKE +L HSEK+A+AFG+L+ PGT + + K
Sbjct: 786 YLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAK 845
Query: 624 NLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
NLRVC DCH A K +SKI II+RD R+H FKNG CSC D+W
Sbjct: 846 NLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 115/489 (23%), Positives = 204/489 (41%), Gaps = 63/489 (12%)
Query: 48 KQAHAIILKTAHFHDHF-VSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGS 106
KQ HA + K + D V+ TL+ Y +F KVFD I N N +
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLVNLYRK--CGDFGAVYKVFDRISERNQVSWNSLISSL 174
Query: 107 IENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACA---VTGSVKEGVQFHAFVVKQGLT 163
+ A+ + M+ N P+ FT ++ AC+ + + G Q HA+ +++G
Sbjct: 175 CSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL 234
Query: 164 GDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFV 223
I + + MY G ++ +L G D++ WN ++ + ++ A E
Sbjct: 235 NSFIINTL-VAMYGKLGKLASSKVLLGSFGG--RDLVTWNTVLSSLCQNEQLLEALEYLR 291
Query: 224 NMP----------------------------------------DKNVGSWNAMISGLARC 243
M D+N +A++ C
Sbjct: 292 EMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNC 351
Query: 244 GMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREK-IKPSRHLLPSM 302
+ + R +FD M +R W+A+I GY + KEAL +F M+ + + + +
Sbjct: 352 KQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGV 411
Query: 303 LTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREV 362
+ C G+ + IH FV + + D + L+DMY + G++D+A +F KM+ R++
Sbjct: 412 VPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDL 471
Query: 363 STWNAMIGGLAIHGRAEDAMKLFTKMNGEKR-----------KPNGVTFVGVLNACAHAG 411
TWN MI G EDA+ L KM +R KPN +T + +L +CA
Sbjct: 472 VTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALS 531
Query: 412 MVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGAL 471
+ +G + ++ + ++ +VD+ + G ++ + K + +P K NV W +
Sbjct: 532 ALAKGKEI-HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK-NVITWNVI 589
Query: 472 LNACRIHGN 480
+ A +HGN
Sbjct: 590 IMAYGMHGN 598
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 134/317 (42%), Gaps = 67/317 (21%)
Query: 103 LKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGL 162
L+ + + +A+ Y M+VL +P+ + +P L KA A ++ G Q HA V K G
Sbjct: 69 LRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGY 128
Query: 163 TGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVF 222
D V N +++ Y KCG+ A +VF
Sbjct: 129 GVD--------------------------------SVTVANTLVNLYRKCGDFGAVYKVF 156
Query: 223 VNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALE 282
D + ER+++SW+++I ++ ALE
Sbjct: 157 -------------------------------DRISERNQVSWNSLISSLCSFEKWEMALE 185
Query: 283 VFHQMQREKIKPSRHLLPSMLTVCANVG---SLDQGRWIHSFVERNSIQVDAVLGTALID 339
F M E ++PS L S++T C+N+ L G+ +H++ R ++++ + L+
Sbjct: 186 AFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVA 244
Query: 340 MYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVT 399
MY K G+L + + R++ TWN ++ L + + +A++ +M E +P+ T
Sbjct: 245 MYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFT 304
Query: 400 FVGVLNACAHAGMVERG 416
VL AC+H M+ G
Sbjct: 305 ISSVLPACSHLEMLRTG 321
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 107/214 (50%), Gaps = 5/214 (2%)
Query: 264 WSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVE 323
W ++ ++ +EA+ + M IKP + P++L A++ ++ G+ IH+ V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 324 RNSIQVDAV-LGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAM 382
+ VD+V + L+++Y KCG ++VF+++ R +WN++I L + E A+
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 383 KLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHF--GCVV 440
+ F M E +P+ T V V+ AC++ M E GL + + + E+ F +V
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPE-GLMMGKQVHAYGLRKGELNSFIINTLV 243
Query: 441 DLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNA 474
+ G+ G + ++ + S + ++ W +L++
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSS 276
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 427 bits (1099), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/659 (34%), Positives = 367/659 (55%), Gaps = 49/659 (7%)
Query: 51 HAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENG 110
H + LK D +V+ +L+ Y+ + A +FD +P ++ N + G ++G
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLYSR--YKAVGNARILFDEMPVRDMGSWNAMISGYCQSG 230
Query: 111 EPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKS 170
+A++ + + ++S T +L AC G GV H++ +K GL ++ + +
Sbjct: 231 NAKEALTLSNGLRAMDS----VTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSN 286
Query: 171 AGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM----- 225
I +YA FG R+ +K+ D D+I WN++I Y + A +F M
Sbjct: 287 KLIDLYAEFGRLRDCQKVFDR--MYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRI 344
Query: 226 -PD----------------------------------KNVGSWNAMISGLARCGMIENAR 250
PD +++ NA++ A+ G++++AR
Sbjct: 345 QPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSAR 404
Query: 251 TLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQRE-KIKPSRHLLPSMLTVCANV 309
+F+ + D ISW+ II GY + EA+E+++ M+ E +I ++ S+L C+
Sbjct: 405 AVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQA 464
Query: 310 GSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMI 369
G+L QG +H + +N + +D + T+L DMY KCGRL+ A +F ++ WN +I
Sbjct: 465 GALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLI 524
Query: 370 GGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEI 429
HG E A+ LF +M E KP+ +TFV +L+AC+H+G+V+ G F M+ Y I
Sbjct: 525 ACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGI 584
Query: 430 EPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGW 489
P ++H+GC+VD+ GRAG +E A KFI+SM ++P+ ++WGALL+ACR+HGNV+LG+
Sbjct: 585 TPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASE 644
Query: 490 ILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFK 549
L ++EP + G + LLSN+YA AG+W+ V +R + +G+ PG S M++ KV F
Sbjct: 645 HLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFY 704
Query: 550 MGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQHSEKIALAFG 609
G+ +HP +E+Y L + KL++ GY P+ V D+E++EKE +L HSE++A+AF
Sbjct: 705 TGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFA 764
Query: 610 LLHAKPGTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
L+ TT+ I KNLRVC DCHS K +SKI II+RD R+HHFKNG+CSC D+W
Sbjct: 765 LIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 126/478 (26%), Positives = 215/478 (44%), Gaps = 47/478 (9%)
Query: 43 SLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIY 102
+LQ K HA ++ + + +S L+ Y N LA FD I +V+ N+
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCY--LGNVALARHTFDHIQNRDVYAWNLM 123
Query: 103 LKGSIENGEPHKAISCYHKMMVLNS-RPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQG 161
+ G G + I C+ M+ + P+ T+P++ KAC +V +G + H +K G
Sbjct: 124 ISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKIHCLALKFG 180
Query: 162 LTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGE------- 214
DV++ ++ I +Y+ + AR + DE D+ WNAMI GY + G
Sbjct: 181 FMWDVYVAASLIHLYSRYKAVGNARILFDE--MPVRDMGSWNAMISGYCQSGNAKEALTL 238
Query: 215 ---VEAANEVFV--------NMPDKNVGSW-----------------NAMISGLARCGMI 246
+ A + V V D N G N +I A G +
Sbjct: 239 SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRL 298
Query: 247 ENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVC 306
+ + +FD M RD ISW++II Y A+ +F +M+ +I+P L S+ ++
Sbjct: 299 RDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASIL 358
Query: 307 ANVGSLDQGRWIHSFVERNSIQV-DAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTW 365
+ +G + R + F R + D +G A++ MY K G +D A VF + +V +W
Sbjct: 359 SQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISW 418
Query: 366 NAMIGGLAIHGRAEDAMKLFTKMNGEKR-KPNGVTFVGVLNACAHAGMVERGLGLFNSMK 424
N +I G A +G A +A++++ M E N T+V VL AC+ AG + +G+ L +
Sbjct: 419 NTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLL 478
Query: 425 RVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVE 482
+ + ++ + D+ G+ G +E+A +P + N W L+ HG+ E
Sbjct: 479 K-NGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFHGHGE 534
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 427 bits (1098), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/617 (37%), Positives = 343/617 (55%), Gaps = 42/617 (6%)
Query: 84 ATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAV 143
A VF+ +P NV +KG ++ G +A S + +M N+ ++ +F
Sbjct: 98 ARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRM----PERNEVSWTVMFGGLID 153
Query: 144 TGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWN 203
G + + + + + + DV + I G EAR + DE + +V+ W
Sbjct: 154 DGRIDKARKLYDMMPVK----DVVASTNMIGGLCREGRVDEARLIFDE--MRERNVVTWT 207
Query: 204 AMIDGYLKCGEVEAANEVFVNMPDKNVGSW------------------------------ 233
MI GY + V+ A ++F MP+K SW
Sbjct: 208 TMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIA 267
Query: 234 -NAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKI 292
NAMI G G I AR +FD M +RD +W +I Y ++ EAL++F QMQ++ +
Sbjct: 268 CNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGV 327
Query: 293 KPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWE 352
+PS L S+L+VCA + SL GR +H+ + R D + + L+ MYVKCG L A
Sbjct: 328 RPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKL 387
Query: 353 VFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGM 412
VF++ +++ WN++I G A HG E+A+K+F +M PN VT + +L AC++AG
Sbjct: 388 VFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGK 447
Query: 413 VERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALL 472
+E GL +F SM+ + + P +EH+ C VD+LGRAG V++A + IESM +KP+ VWGALL
Sbjct: 448 LEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALL 507
Query: 473 NACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIET 532
AC+ H ++L E L + EP N+G Y LLS+I A +W DVA VRK M+ +
Sbjct: 508 GACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSK 567
Query: 533 VPGSSMMDMGGKVHEFKMGD-SSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEE 591
PG S +++G KVH F G +HP+ I +MLEK L+ GYSP+ S V +D++EE
Sbjct: 568 FPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEE 627
Query: 592 EKETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDR 651
EK L +HSE++A+A+GLL G + ++KNLRVC DCH+A KL+SK+ II+RD
Sbjct: 628 EKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDA 687
Query: 652 VRYHHFKNGMCSCKDFW 668
R+HHF NG CSC+D+W
Sbjct: 688 NRFHHFNNGECSCRDYW 704
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 159/346 (45%), Gaps = 64/346 (18%)
Query: 173 IQMYASFGLFREARKMLDESGKTQTDVI-CWNAMIDGYLKCGEVEAANEVFVNMPDKNVG 231
I + G EARK D Q I WN+++ GY G + A ++F M ++NV
Sbjct: 24 ISRLSRIGKINEARKFFD---SLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVV 80
Query: 232 SWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREK 291
SWN ++SG + MI AR +F+ M ER+ +SW+A++ GY+++ EA +F +M
Sbjct: 81 SWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMP--- 137
Query: 292 IKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAW 351
ERN + + G + D GR+D A
Sbjct: 138 -------------------------------ERNEVSWTVMFGGLIDD-----GRIDKAR 161
Query: 352 EVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAG 411
++++ M V++V MIGGL GR ++A +F +M R+ N VT+ ++
Sbjct: 162 KLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEM----RERNVVTWTTMITGYRQNN 217
Query: 412 MVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGR--AGLVEEAEKFIESMPVKPNVAVWG 469
V+ ++++E+ PE LLG +G +E+AE+F E MP+KP +A
Sbjct: 218 RVDVA-------RKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIAC-- 268
Query: 470 ALLNACRIHGNVELGE--RVGWILLDMEPRNSGRYALLSNIYAKAG 513
NA I G E+GE + + ME R++ + + Y + G
Sbjct: 269 ---NAM-IVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKG 310
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 161/319 (50%), Gaps = 30/319 (9%)
Query: 176 YASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNA 235
Y S GL +EAR++ DE ++ +V+ WN ++ GY+K + A VF MP++NV SW A
Sbjct: 58 YFSNGLPKEARQLFDE--MSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTA 115
Query: 236 MISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPS 295
M+ G + GM+ A +LF M ER+E+SW+ + G I +A +++ M + + S
Sbjct: 116 MVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVAS 175
Query: 296 RHLLPSMLTVCANVGSLDQGRWI-HSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVF 354
+++ + C G +D+ R I ERN V T +I Y + R+D+A ++F
Sbjct: 176 TNMIGGL---CRE-GRVDEARLIFDEMRERN-----VVTWTTMITGYRQNNRVDVARKLF 226
Query: 355 EKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVE 414
E M + +W +M+ G + GR EDA + F M KP + AC +A +V
Sbjct: 227 EVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVM---PMKP--------VIAC-NAMIVG 274
Query: 415 RG-LGLFNSMKRVYEIEPEMEH--FGCVVDLLGRAGLVEEAEKFIESMP---VKPNVAVW 468
G +G + +RV+++ + ++ + ++ R G EA M V+P+
Sbjct: 275 FGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSL 334
Query: 469 GALLNACRIHGNVELGERV 487
++L+ C +++ G +V
Sbjct: 335 ISILSVCATLASLQYGRQV 353
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 11/197 (5%)
Query: 43 SLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIY 102
SLQ+ +Q HA +++ D +V+ L+ Y A VFD ++ + N
Sbjct: 346 SLQYGRQVHAHLVRCQFDDDVYVASVLMTMYV--KCGELVKAKLVFDRFSSKDIIMWNSI 403
Query: 103 LKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQ-FHAFVVKQG 161
+ G +G +A+ +H+M + PNK T + AC+ G ++EG++ F + K
Sbjct: 404 ISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFC 463
Query: 162 LTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDG-----YLKCGEVE 216
+T V S + M G +A +++ ES + D W A++ L EV
Sbjct: 464 VTPTVEHYSCTVDMLGRAGQVDKAMELI-ESMTIKPDATVWGALLGACKTHSRLDLAEV- 521
Query: 217 AANEVFVNMPDKNVGSW 233
AA ++F N PD N G++
Sbjct: 522 AAKKLFENEPD-NAGTY 537
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 427 bits (1097), Expect = e-119, Method: Compositional matrix adjust.
Identities = 206/497 (41%), Positives = 315/497 (63%), Gaps = 9/497 (1%)
Query: 177 ASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSW--- 233
++F L+RE R SG + D + +I +V + + GS
Sbjct: 103 SAFSLYREMRV----SGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYV 158
Query: 234 -NAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKI 292
N+++ A CG + +A +FD+M E+D ++W+++I+G+ + +EAL ++ +M + I
Sbjct: 159 QNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGI 218
Query: 293 KPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWE 352
KP + S+L+ CA +G+L G+ +H ++ + + + L+D+Y +CGR++ A
Sbjct: 219 KPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKT 278
Query: 353 VFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNG-EKRKPNGVTFVGVLNACAHAG 411
+F++M + +W ++I GLA++G ++A++LF M E P +TFVG+L AC+H G
Sbjct: 279 LFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCG 338
Query: 412 MVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGAL 471
MV+ G F M+ Y+IEP +EHFGC+VDLL RAG V++A ++I+SMP++PNV +W L
Sbjct: 339 MVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTL 398
Query: 472 LNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIE 531
L AC +HG+ +L E +L +EP +SG Y LLSN+YA RW DV ++RK M G++
Sbjct: 399 LGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVK 458
Query: 532 TVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEE 591
VPG S++++G +VHEF MGD SHPQ IY L++M +L+ EGY P S V D+EEE
Sbjct: 459 KVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEE 518
Query: 592 EKETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDR 651
EKE + HSEKIA+AF L+ + + +VKNLRVCADCH A KLVSK+Y I++RDR
Sbjct: 519 EKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDR 578
Query: 652 VRYHHFKNGMCSCKDFW 668
R+HHFKNG CSC+D+W
Sbjct: 579 SRFHHFKNGSCSCQDYW 595
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 152/349 (43%), Gaps = 71/349 (20%)
Query: 51 HAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENG 110
H++++++ +V +LL YAN + A KVFD +P ++ N + G ENG
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYAN--CGDVASAYKVFDKMPEKDLVAWNSVINGFAENG 201
Query: 111 EPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKS 170
+P +A++ Y +M +P+ FT +L ACA G++ G + H +++K GLT ++H +
Sbjct: 202 KPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSN 261
Query: 171 AGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNV 230
+ +YA G EA+ + DE M DKN
Sbjct: 262 VLLDLYARCGRVEEAKTLFDE---------------------------------MVDKNS 288
Query: 231 GSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQR- 289
SW ++I GLA ++G+ KEA+E+F M+
Sbjct: 289 VSWTSLIVGLA--------------------------VNGF-----GKEAIELFKYMEST 317
Query: 290 EKIKPSRHLLPSMLTVCANVGSLDQG-RWIHSFVERNSIQVDAVLGTALIDMYVKCGRLD 348
E + P +L C++ G + +G + E I+ ++D+ + G++
Sbjct: 318 EGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVK 377
Query: 349 MAWEVFEKMKVR-EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPN 396
A+E + M ++ V W ++G +HG ++ A F ++ + +PN
Sbjct: 378 KAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAE--FARIQILQLEPN 424
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 426 bits (1094), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/595 (37%), Positives = 336/595 (56%), Gaps = 47/595 (7%)
Query: 114 KAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGI 173
++IS Y M+ S P+ F++P + K+CA G Q H V K G + + +A I
Sbjct: 36 ESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALI 95
Query: 174 QMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMP------- 226
MY GL +ARK+ +E+ ++ +C+NA+I GY +V A +F M
Sbjct: 96 SMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVD 155
Query: 227 --------------------------------DKNVGSWNAMISGLARCGMIENARTLFD 254
D V N+ I+ +CG +E R LFD
Sbjct: 156 SVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFD 215
Query: 255 EMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQ 314
EM + I+W+A+I GY + + LE++ QM+ + P L S+L+ CA++G+
Sbjct: 216 EMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKI 275
Query: 315 GRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAI 374
G + VE N + + A I MY +CG L A VF+ M V+ + +W AMIG +
Sbjct: 276 GHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGM 335
Query: 375 HGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEME 434
HG E + LF M +P+G FV VL+AC+H+G+ ++GL LF +MKR Y++EP E
Sbjct: 336 HGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPE 395
Query: 435 HFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDM 494
H+ C+VDLLGRAG ++EA +FIESMPV+P+ AVWGALL AC+IH NV++ E +++
Sbjct: 396 HYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEF 455
Query: 495 EPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSS 554
EP N G Y L+SNIY+ + + + R+R +M+ER PG S ++ G+VH F GD S
Sbjct: 456 EPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRS 515
Query: 555 HPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEE-EEKETVLKQHSEKIALAFGLLHA 613
H Q +E++ +M+D+L+ +M D + EE + ++HSE++A+AFG+L++
Sbjct: 516 HEQTEEVH----RMLDELETSVMELAGNM---DCDRGEEVSSTTREHSERLAIAFGILNS 568
Query: 614 KPGTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
PGT + ++KNLRVC DCH K VSKI ++RD R+H+FK+G+CSCKD+W
Sbjct: 569 IPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 161/396 (40%), Gaps = 49/396 (12%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPN-VFVC-NIYLKG 105
+Q H + K + FV L+ Y A KVF+ P+ + + VC N + G
Sbjct: 73 QQLHCHVTKGGCETEPFVLTALISMYCKCGL--VADARKVFEENPQSSQLSVCYNALISG 130
Query: 106 SIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGD 165
N + A + +M + T L C V + G H VK GL +
Sbjct: 131 YTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSE 190
Query: 166 VHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM 225
V + ++ I MY G R++ DE +I WNA+I GY + G E++ M
Sbjct: 191 VAVLNSFITMYMKCGSVEAGRRLFDE--MPVKGLITWNAVISGYSQNGLAYDVLELYEQM 248
Query: 226 ------PD---------------------------------KNVGSWNAMISGLARCGMI 246
PD NV NA IS ARCG +
Sbjct: 249 KSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNL 308
Query: 247 ENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVC 306
AR +FD M + +SW+A+I Y + L +F M + I+P + +L+ C
Sbjct: 309 AKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSAC 368
Query: 307 ANVGSLDQGRWIHSFVERN-SIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR-EVST 364
++ G D+G + ++R ++ + L+D+ + GRLD A E E M V + +
Sbjct: 369 SHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAV 428
Query: 365 WNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTF 400
W A++G IH + A F K+ + +PN + +
Sbjct: 429 WGALLGACKIHKNVDMAELAFAKVI--EFEPNNIGY 462
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 99/218 (45%), Gaps = 4/218 (1%)
Query: 264 WSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVE 323
W+ + Q F E++ ++ M R P P +L CA++ G+ +H V
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 324 RNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEK-MKVREVST-WNAMIGGLAIHGRAEDA 381
+ + + + TALI MY KCG + A +VFE+ + ++S +NA+I G + + DA
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 382 MKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVD 441
+F +M + VT +G++ C + G L + ++ E+ +
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVK-GGLDSEVAVLNSFIT 199
Query: 442 LLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHG 479
+ + G VE + + MPVK + W A+++ +G
Sbjct: 200 MYMKCGSVEAGRRLFDEMPVK-GLITWNAVISGYSQNG 236
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 422 bits (1085), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/588 (36%), Positives = 351/588 (59%), Gaps = 33/588 (5%)
Query: 83 LATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNS-RPNKFTYPTLFKAC 141
LA F+ + ++ N + G + G +A+ + KM+ + P++FT ++ AC
Sbjct: 230 LAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSAC 289
Query: 142 AVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVIC 201
A + G Q H+ +V G + +A I MY+ G AR+++++ G +
Sbjct: 290 ANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEG 349
Query: 202 WNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDE 261
+ A++DGY+K G+ + A+ +F + +RD
Sbjct: 350 FTALLDGYIKLGD-------------------------------MNQAKNIFVSLKDRDV 378
Query: 262 ISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSF 321
++W+A+I GY + + EA+ +F M +P+ + L +ML+V +++ SL G+ IH
Sbjct: 379 VAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGS 438
Query: 322 VERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKV-REVSTWNAMIGGLAIHGRAED 380
++ + ALI MY K G + A F+ ++ R+ +W +MI LA HG AE+
Sbjct: 439 AVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEE 498
Query: 381 AMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVV 440
A++LF M E +P+ +T+VGV +AC HAG+V +G F+ MK V +I P + H+ C+V
Sbjct: 499 ALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMV 558
Query: 441 DLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSG 500
DL GRAGL++EA++FIE MP++P+V WG+LL+ACR+H N++LG+ LL +EP NSG
Sbjct: 559 DLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSG 618
Query: 501 RYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKE 560
Y+ L+N+Y+ G+W++ A++RK MK+ ++ G S +++ KVH F + D +HP+ E
Sbjct: 619 AYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNE 678
Query: 561 IYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLH 620
IY+ ++K+ D+++ GY P+T+ V +D+EEE KE +L+ HSEK+A+AFGL+ TTL
Sbjct: 679 IYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLR 738
Query: 621 IVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
I+KNLRVC DCH+A K +SK+ G II+RD R+HHFK+G CSC+D+W
Sbjct: 739 IMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 194/454 (42%), Gaps = 72/454 (15%)
Query: 64 FVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMM 123
F T+L Y+ + T + FD +P+ + + G G+ HKAI M+
Sbjct: 81 FSWNTVLSAYSKRGDMDST--CEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMV 138
Query: 124 VLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFR 183
P +FT + + A T ++ G + H+F+VK GL G+V + ++ + MYA G
Sbjct: 139 KEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPM 198
Query: 184 EARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARC 243
A+ + D D+ WNAMI +++ G+++ A F M ++++ +WN+MISG
Sbjct: 199 MAKFVFDR--MVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGF--- 253
Query: 244 GMIENARTLFDEMGERDEISWSAIIDGYIKQRCFK-EALEVFHQMQREK-IKPSRHLLPS 301
QR + AL++F +M R+ + P R L S
Sbjct: 254 -----------------------------NQRGYDLRALDIFSKMLRDSLLSPDRFTLAS 284
Query: 302 MLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKC----------------- 344
+L+ CAN+ L G+ IHS + + ++ ALI MY +C
Sbjct: 285 VLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKD 344
Query: 345 ----------------GRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKM 388
G ++ A +F +K R+V W AMI G HG +A+ LF M
Sbjct: 345 LKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSM 404
Query: 389 NGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGL 448
G ++PN T +L+ + + G + S + EI + ++ + +AG
Sbjct: 405 VGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYS-VSVSNALITMYAKAGN 463
Query: 449 VEEAEKFIESMPVKPNVAVWGALLNACRIHGNVE 482
+ A + + + + + W +++ A HG+ E
Sbjct: 464 ITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE 497
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 128/234 (54%), Gaps = 4/234 (1%)
Query: 199 VICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGE 258
V N +++ Y K G A ++F MP + SWN ++S ++ G +++ FD++ +
Sbjct: 49 VYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQ 108
Query: 259 RDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWI 318
RD +SW+ +I GY + +A+ V M +E I+P++ L ++L A ++ G+ +
Sbjct: 109 RDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKV 168
Query: 319 HSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRA 378
HSF+ + ++ + + +L++MY KCG MA VF++M VR++S+WNAMI G+
Sbjct: 169 HSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQM 228
Query: 379 EDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPE 432
+ AM F +M + + VT+ +++ G R L +F+ M R + P+
Sbjct: 229 DLAMAQFEQM----AERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPD 278
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 117/261 (44%), Gaps = 27/261 (10%)
Query: 46 HLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCI--PRPNVFVCNIYL 103
H KQ H +K+ + VS L+ YA N T A++ FD I R V ++ +
Sbjct: 431 HGKQIHGSAVKSGEIYSVSVSNALITMYAKA--GNITSASRAFDLIRCERDTVSWTSMII 488
Query: 104 KGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFV--VKQG 161
+ ++G +A+ + M++ RP+ TY +F AC G V +G Q+ + V +
Sbjct: 489 ALA-QHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKI 547
Query: 162 LTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDG-----YLKCGEVE 216
+ H + + ++ GL +EA++ + E + DV+ W +++ + G+V
Sbjct: 548 IPTLSHY-ACMVDLFGRAGLLQEAQEFI-EKMPIEPDVVTWGSLLSACRVHKNIDLGKVA 605
Query: 217 AANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRC 276
A E + + +N G+++A+ + + CG E A + M DG +K+
Sbjct: 606 A--ERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMK-----------DGRVKKEQ 652
Query: 277 FKEALEVFHQMQREKIKPSRH 297
+EV H++ ++ H
Sbjct: 653 GFSWIEVKHKVHVFGVEDGTH 673
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 421 bits (1081), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/718 (32%), Positives = 372/718 (51%), Gaps = 78/718 (10%)
Query: 24 SSKLSQKTVLDILNKKCFHSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTL 83
SSK KT+ I N S KQ HA ++T H + ++ Y N
Sbjct: 3 SSKALIKTL--IKNPTRIKSKSQAKQLHAQFIRTQSL-SHTSASIVISIYTNLKLL--HE 57
Query: 84 ATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAV 143
A +F + P V ++ + KA++ + +M P+ +P++ K+C +
Sbjct: 58 ALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTM 117
Query: 144 TGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASF----------GLFREARKMLDESG 193
++ G H F+V+ G+ D++ +A + MYA +F E + SG
Sbjct: 118 MMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSG 177
Query: 194 ----KTQT--------------------DVICWNAMIDGYLKCGEVEAANEVFVNMP--- 226
K +T DV+ +N +I GY + G E A + M
Sbjct: 178 DEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTD 237
Query: 227 ------------------------------------DKNVGSWNAMISGLARCGMIENAR 250
D +V ++++ A+ IE++
Sbjct: 238 LKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSE 297
Query: 251 TLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVG 310
+F + RD ISW++++ GY++ + EAL +F QM K+KP S++ CA++
Sbjct: 298 RVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLA 357
Query: 311 SLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIG 370
+L G+ +H +V R + + +AL+DMY KCG + A ++F++M V + +W A+I
Sbjct: 358 TLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIM 417
Query: 371 GLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIE 430
G A+HG +A+ LF +M + KPN V FV VL AC+H G+V+ G FNSM +VY +
Sbjct: 418 GHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLN 477
Query: 431 PEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWI 490
E+EH+ V DLLGRAG +EEA FI M V+P +VW LL++C +H N+EL E+V
Sbjct: 478 QELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEK 537
Query: 491 LLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKM 550
+ ++ N G Y L+ N+YA GRW ++A++R M+++G+ P S ++M K H F
Sbjct: 538 IFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVS 597
Query: 551 GDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGL 610
GD SHP M +I L+ +M++++ EGY +TS V +D++EE K +L HSE++A+AFG+
Sbjct: 598 GDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGI 657
Query: 611 LHAKPGTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
++ +PGTT+ + KN+R+C DCH A K +SKI II+RD R+HHF G CSC D+W
Sbjct: 658 INTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 419 bits (1078), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/570 (36%), Positives = 331/570 (58%), Gaps = 35/570 (6%)
Query: 100 NIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVK 159
N + G + G +A+ +M+ ++FTYP++ +ACA G ++ G Q HA+V++
Sbjct: 255 NAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR 314
Query: 160 QGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAAN 219
+ E D N+++ Y KCG+ + A
Sbjct: 315 R------------------------------EDFSFHFD----NSLVSLYYKCGKFDEAR 340
Query: 220 EVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKE 279
+F MP K++ SWNA++SG G I A+ +F EM E++ +SW +I G + +E
Sbjct: 341 AIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEE 400
Query: 280 ALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALID 339
L++F M+RE +P + + CA +G+ G+ H+ + + G ALI
Sbjct: 401 GLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALIT 460
Query: 340 MYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVT 399
MY KCG ++ A +VF M + +WNA+I L HG +A+ ++ +M + +P+ +T
Sbjct: 461 MYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRIT 520
Query: 400 FVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESM 459
+ VL AC+HAG+V++G F+SM+ VY I P +H+ ++DLL R+G +AE IES+
Sbjct: 521 LLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESL 580
Query: 460 PVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVA 519
P KP +W ALL+ CR+HGN+ELG L + P + G Y LLSN++A G+W++VA
Sbjct: 581 PFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVA 640
Query: 520 RVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSP 579
RVRKLM++RG++ S ++M +VH F + D+SHP+ + +Y+ L+ + +++ GY P
Sbjct: 641 RVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVP 700
Query: 580 NTSMVSYDIEEE-EKETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFKLV 638
+TS V +D+E + KE +L HSEKIA+AFGL+ PGTT+ I KNLR C DCH+ F+ +
Sbjct: 701 DTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFL 760
Query: 639 SKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
S + +II+RDR R+HHF+NG CSC +FW
Sbjct: 761 SWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 117/443 (26%), Positives = 192/443 (43%), Gaps = 81/443 (18%)
Query: 80 NFTLATKVFDCIP--RPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTL 137
+ TLA VF+ P + + N + G N + + AI+ + KM +P+ FT+ ++
Sbjct: 95 DITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASV 154
Query: 138 FKACA-VTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMY----ASFGLFREARKMLDES 192
A V K+ VQFHA +K G + +A + +Y +S L ARK+ DE
Sbjct: 155 LAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEI 214
Query: 193 GKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDK-NVGSWNAMISGLARCGMIENART 251
+ D W M+ GY+K G + E+ M D + ++NAMIS
Sbjct: 215 --LEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMIS------------- 259
Query: 252 LFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGS 311
GY+ + ++EALE+ +M I+ PS++ CA G
Sbjct: 260 ------------------GYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGL 301
Query: 312 LDQGRWIHSFVERN---SIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNA- 367
L G+ +H++V R S D +L+ +Y KCG+ D A +FEKM +++ +WNA
Sbjct: 302 LQLGKQVHAYVLRREDFSFHFD----NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNAL 357
Query: 368 ------------------------------MIGGLAIHGRAEDAMKLFTKMNGEKRKPNG 397
MI GLA +G E+ +KLF+ M E +P
Sbjct: 358 LSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCD 417
Query: 398 VTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIE 457
F G + +CA G G + ++ + + ++ + + G+VEEA +
Sbjct: 418 YAFSGAIKSCAVLGAYCNGQQYHAQLLKI-GFDSSLSAGNALITMYAKCGVVEEARQVFR 476
Query: 458 SMPVKPNVAVWGALLNACRIHGN 480
+MP +V+ W AL+ A HG+
Sbjct: 477 TMPCLDSVS-WNALIAALGQHGH 498
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 174/396 (43%), Gaps = 36/396 (9%)
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCG 213
H ++ G HI + I +Y AR++ DE ++ D I M+ GY G
Sbjct: 37 HGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEI--SEPDKIARTTMVSGYCASG 94
Query: 214 EVEAANEVFVNMPD--KNVGSWNAMISGLARCGMIENARTLFDEMGER----DEISWSAI 267
++ A VF P ++ +NAMI+G + +A LF +M D +++++
Sbjct: 95 DITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASV 154
Query: 268 IDGYIKQRCFKEALEVFHQMQREK----IKPSRHLLPSMLTVCANVGSLDQGRWIHSF-- 321
+ G ++ FH + I + L S+ + CA+ SL +HS
Sbjct: 155 LAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSL-----LHSARK 209
Query: 322 VERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR-EVSTWNAMIGGLAIHGRAED 380
V ++ D T ++ YVK G D+ E+ E M ++ +NAMI G G ++
Sbjct: 210 VFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQE 269
Query: 381 AMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFG--- 437
A+++ +M + + T+ V+ ACA AG+++ G K+V+ E F
Sbjct: 270 ALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLG-------KQVHAYVLRREDFSFHF 322
Query: 438 --CVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDME 495
+V L + G +EA E MP K V+ W ALL+ G++ GE I +M+
Sbjct: 323 DNSLVSLYYKCGKFDEARAIFEKMPAKDLVS-WNALLSGYVSSGHI--GE-AKLIFKEMK 378
Query: 496 PRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIE 531
+N + ++ + A+ G ++ ++ MK G E
Sbjct: 379 EKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFE 414
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 154/404 (38%), Gaps = 101/404 (25%)
Query: 44 LQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYL 103
LQ KQ HA +L+ F HF + + Y F+ A +F+ +P ++ N L
Sbjct: 302 LQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDE---ARAIFEKMPAKDLVSWNALL 358
Query: 104 KGSIENGEPHKAISCYHKM--------MVLNS-----------------------RPNKF 132
G + +G +A + +M M++ S P +
Sbjct: 359 SGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDY 418
Query: 133 TYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDES 192
+ K+CAV G+ G Q+HA ++K G + +A I MYA G+ EAR
Sbjct: 419 AFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEAR------ 472
Query: 193 GKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTL 252
+VF MP + SWNA+I+ L + G A +
Sbjct: 473 ---------------------------QVFRTMPCLDSVSWNALIAALGQHGHGAEAVDV 505
Query: 253 FDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSL 312
++EM ++ I+P R L ++LT C++ G +
Sbjct: 506 YEEM-------------------------------LKKGIRPDRITLLTVLTACSHAGLV 534
Query: 313 DQGR-WIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVS-TWNAMIG 370
DQGR + S I A LID+ + G+ A V E + + + W A++
Sbjct: 535 DQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLS 594
Query: 371 GLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVE 414
G +HG E + K+ G + +G T++ + N A G E
Sbjct: 595 GCRVHGNMELGIIAADKLFGLIPEHDG-TYMLLSNMHAATGQWE 637
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 108/284 (38%), Gaps = 44/284 (15%)
Query: 292 IKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAW 351
+P H+L ++ V L+ R + + + D + T ++ Y G + +A
Sbjct: 45 FQPRAHILNRLIDVYCKSSELNYARQLFDEIS----EPDKIARTTMVSGYCASGDITLAR 100
Query: 352 EVFEKMKV--REVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACA- 408
VFEK V R+ +NAMI G + + A+ LF KM E KP+ TF VL A
Sbjct: 101 GVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLAL 160
Query: 409 -----------HAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIE 457
HA ++ G G S+ L+ A K +
Sbjct: 161 VADDEKQCVQFHAAALKSGAGYITSVSNAL--------VSVYSKCASSPSLLHSARKVFD 212
Query: 458 SMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNI--YAKAGRW 515
+ ++ + W ++ +G +LGE LL+ N A + I Y G +
Sbjct: 213 EI-LEKDERSWTTMMTGYVKNGYFDLGEE----LLEGMDDNMKLVAYNAMISGYVNRGFY 267
Query: 516 DDVARVRKLMKERGIE----TVPG-------SSMMDMGGKVHEF 548
+ + + M GIE T P + ++ +G +VH +
Sbjct: 268 QEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAY 311
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 419 bits (1076), Expect = e-117, Method: Compositional matrix adjust.
Identities = 194/436 (44%), Positives = 294/436 (67%), Gaps = 1/436 (0%)
Query: 234 NAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIK 293
N+++ A CG + +A +FD+M E+D ++W+++I+G+ + +EAL ++ +M + IK
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 86
Query: 294 PSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEV 353
P + S+L+ CA +G+L G+ +H ++ + + + L+D+Y +CGR++ A +
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 146
Query: 354 FEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNG-EKRKPNGVTFVGVLNACAHAGM 412
F++M + +W ++I GLA++G ++A++LF M E P +TFVG+L AC+H GM
Sbjct: 147 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 206
Query: 413 VERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALL 472
V+ G F M+ Y+IEP +EHFGC+VDLL RAG V++A ++I+SMP++PNV +W LL
Sbjct: 207 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 266
Query: 473 NACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIET 532
AC +HG+ +L E +L +EP +SG Y LLSN+YA RW DV ++RK M G++
Sbjct: 267 GACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKK 326
Query: 533 VPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEE 592
VPG S++++G +VHEF MGD SHPQ IY L++M +L+ EGY P S V D+EEEE
Sbjct: 327 VPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEE 386
Query: 593 KETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRV 652
KE + HSEKIA+AF L+ + + +VKNLRVCADCH A KLVSK+Y I++RDR
Sbjct: 387 KENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRS 446
Query: 653 RYHHFKNGMCSCKDFW 668
R+HHFKNG CSC+D+W
Sbjct: 447 RFHHFKNGSCSCQDYW 462
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 152/349 (43%), Gaps = 71/349 (20%)
Query: 51 HAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENG 110
H++++++ +V +LL YAN + A KVFD +P ++ N + G ENG
Sbjct: 11 HSVVIRSGFGSLIYVQNSLLHLYAN--CGDVASAYKVFDKMPEKDLVAWNSVINGFAENG 68
Query: 111 EPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKS 170
+P +A++ Y +M +P+ FT +L ACA G++ G + H +++K GLT ++H +
Sbjct: 69 KPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSN 128
Query: 171 AGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNV 230
+ +YA G EA+ + DE M DKN
Sbjct: 129 VLLDLYARCGRVEEAKTLFDE---------------------------------MVDKNS 155
Query: 231 GSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQR- 289
SW ++I GLA ++G+ KEA+E+F M+
Sbjct: 156 VSWTSLIVGLA--------------------------VNGF-----GKEAIELFKYMEST 184
Query: 290 EKIKPSRHLLPSMLTVCANVGSLDQG-RWIHSFVERNSIQVDAVLGTALIDMYVKCGRLD 348
E + P +L C++ G + +G + E I+ ++D+ + G++
Sbjct: 185 EGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVK 244
Query: 349 MAWEVFEKMKVR-EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPN 396
A+E + M ++ V W ++G +HG ++ A F ++ + +PN
Sbjct: 245 KAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAE--FARIQILQLEPN 291
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 91/165 (55%), Gaps = 2/165 (1%)
Query: 315 GRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAI 374
G IHS V R+ + +L+ +Y CG + A++VF+KM +++ WN++I G A
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 375 HGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEME 434
+G+ E+A+ L+T+MN + KP+G T V +L+ACA G + G + M +V + +
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV-GLTRNLH 125
Query: 435 HFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHG 479
++DL R G VEEA+ + M V N W +L+ ++G
Sbjct: 126 SSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNG 169
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 416 bits (1069), Expect = e-116, Method: Compositional matrix adjust.
Identities = 234/632 (37%), Positives = 345/632 (54%), Gaps = 51/632 (8%)
Query: 84 ATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAV 143
A +VF + + N + G +NG +A+ Y M + P FT + +CA
Sbjct: 368 ARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCAS 427
Query: 144 TGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWN 203
K G Q H +K G+ +V + +A + +YA G E RK+ S + D + WN
Sbjct: 428 LKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIF--SSMPEHDQVSWN 485
Query: 204 AMIDGYLKCGEVEAANEVFVNMPDKNVG-------------------------------- 231
++I G L E V + + G
Sbjct: 486 SII-GALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLAL 544
Query: 232 ---------SWNAMISGLARCGMIENARTLFDEMGER-DEISWSAIIDGYIKQRCFKEAL 281
+ NA+I+ +CG ++ +F M ER D ++W+++I GYI +AL
Sbjct: 545 KNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKAL 604
Query: 282 EVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMY 341
++ M + + + ++L+ A+V +L++G +H+ R ++ D V+G+AL+DMY
Sbjct: 605 DLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMY 664
Query: 342 VKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGE-KRKPNGVTF 400
KCGRLD A F M VR +WN+MI G A HG+ E+A+KLF M + + P+ VTF
Sbjct: 665 SKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTF 724
Query: 401 VGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMP 460
VGVL+AC+HAG++E G F SM Y + P +EHF C+ D+LGRAG +++ E FIE MP
Sbjct: 725 VGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMP 784
Query: 461 VKPNVAVWGALLNAC-RIHG-NVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDV 518
+KPNV +W +L AC R +G ELG++ +L +EP N+ Y LL N+YA GRW+D+
Sbjct: 785 MKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDL 844
Query: 519 ARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYS 578
+ RK MK+ ++ G S + M VH F GD SHP IY L+++ K++ GY
Sbjct: 845 VKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYV 904
Query: 579 PNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTL--HIVKNLRVCADCHSAFK 636
P T YD+E+E KE +L HSEK+A+AF +L A+ +TL I+KNLRVC DCHSAFK
Sbjct: 905 PQTGFALYDLEQENKEEILSYHSEKLAVAF-VLAAQRSSTLPIRIMKNLRVCGDCHSAFK 963
Query: 637 LVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
+SKI G II+RD R+HHF++G CSC DFW
Sbjct: 964 YISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 132/554 (23%), Positives = 234/554 (42%), Gaps = 68/554 (12%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSI 107
+Q H ++ K ++ D VS L+ Y + A F I N N +
Sbjct: 124 RQIHGLMFKLSYAVDAVVSNVLISMYWKC-IGSVGYALCAFGDIEVKNSVSWNSIISVYS 182
Query: 108 ENGEPHKAISCYHKMMVLNSRPNKFTYPTLFK-ACAVT-GSVKEGVQFHAFVVKQGLTGD 165
+ G+ A + M SRP ++T+ +L AC++T V+ Q + K GL D
Sbjct: 183 QAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTD 242
Query: 166 VHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM 225
+ + S + +A G ARK+ ++ + + N ++ G ++ E A ++F++M
Sbjct: 243 LFVGSGLVSAFAKSGSLSYARKVFNQ--METRNAVTLNGLMVGLVRQKWGEEATKLFMDM 300
Query: 226 P--------------------------------------------DKNVGSWNAMISGLA 241
D VG N +++ A
Sbjct: 301 NSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYA 360
Query: 242 RCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPS 301
+CG I +AR +F M ++D +SW+++I G + CF EA+E + M+R I P L S
Sbjct: 361 KCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLIS 420
Query: 302 MLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVRE 361
L+ CA++ G+ IH + I ++ + AL+ +Y + G L+ ++F M +
Sbjct: 421 SLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHD 480
Query: 362 VSTWNAMIGGLAIHGRA-EDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVE-----R 415
+WN++IG LA R+ +A+ F +K N +TF VL+A + E
Sbjct: 481 QVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIH 540
Query: 416 GLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNAC 475
GL L N+ I E ++ G+ G ++ EK M + + W ++++
Sbjct: 541 GLALKNN------IADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG- 593
Query: 476 RIHGNVELGERVG--WILLDMEPR-NSGRYALLSNIYAKAGRWDDVARVRKLMKERGIET 532
IH N L + + W +L R +S YA + + +A + V +E+
Sbjct: 594 YIH-NELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLES 652
Query: 533 --VPGSSMMDMGGK 544
V GS+++DM K
Sbjct: 653 DVVVGSALVDMYSK 666
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 133/289 (46%), Gaps = 26/289 (8%)
Query: 219 NEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFK 278
+ ++ N DK+V N +I+ G +AR +FDEM R+ +SW+ I+ GY + K
Sbjct: 25 SRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHK 84
Query: 279 EALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQ--GRWIHSFVERNSIQVDAVLGTA 336
EAL M +E I +++ S+L C +GS+ GR IH + + S VDAV+
Sbjct: 85 EALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNV 144
Query: 337 LIDMYVKC-GRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKP 395
LI MY KC G + A F ++V+ +WN++I + G A ++F+ M + +P
Sbjct: 145 LISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRP 204
Query: 396 NGVTFVG-VLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEE--- 451
TF V AC+ + E + L +I ++ G + DL +GLV
Sbjct: 205 TEYTFGSLVTTACS---LTEPDVRLLE------QIMCTIQKSGLLTDLFVGSGLVSAFAK 255
Query: 452 ------AEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDM 494
A K M + V + G ++ R + GE + +DM
Sbjct: 256 SGSLSYARKVFNQMETRNAVTLNGLMVGLVR----QKWGEEATKLFMDM 300
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 94/219 (42%), Gaps = 14/219 (6%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIP--RPNVFVCNIYLKG 105
KQ H + LK + L+ CY K+F + R NV N + G
Sbjct: 537 KQIHGLALKNNIADEATTENALIACYGKCG--EMDGCEKIFSRMAERRDNV-TWNSMISG 593
Query: 106 SIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGD 165
I N KA+ M+ R + F Y T+ A A +++ G++ HA V+ L D
Sbjct: 594 YIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESD 653
Query: 166 VHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM 225
V + SA + MY+ G A + + + WN+MI GY + G+ E A ++F M
Sbjct: 654 VVVGSALVDMYSKCGRLDYALRFFNTMPVRNS--YSWNSMISGYARHGQGEEALKLFETM 711
Query: 226 ------PDKNVGSWNAMISGLARCGMIENARTLFDEMGE 258
P +V ++ ++S + G++E F+ M +
Sbjct: 712 KLDGQTPPDHV-TFVGVLSACSHAGLLEEGFKHFESMSD 749
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%)
Query: 309 VGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAM 368
VG R+ HS + +N + D L LI+ Y++ G A +VF++M +R +W +
Sbjct: 14 VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACI 73
Query: 369 IGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMV 413
+ G + +G ++A+ M E N FV VL AC G V
Sbjct: 74 VSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 416 bits (1068), Expect = e-116, Method: Compositional matrix adjust.
Identities = 232/668 (34%), Positives = 358/668 (53%), Gaps = 46/668 (6%)
Query: 43 SLQHLKQAHAIILKTAHFHDH-FVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNI 101
S++ + HA I+KT F++ L+ Y+ ++ A V P NV
Sbjct: 21 SMRLGRVVHARIVKTLDSPPPPFLANYLINMYSK--LDHPESARLVLRLTPARNVVSWTS 78
Query: 102 YLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQG 161
+ G +NG A+ + +M PN FT+P FKA A G Q HA VK G
Sbjct: 79 LISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCG 138
Query: 162 LTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEV 221
DV + + MY L +ARK+ DE + + WNA I + G A E
Sbjct: 139 RILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLET--WNAFISNSVTDGRPREAIEA 196
Query: 222 FVNMP---------------------------------------DKNVGSWNAMISGLAR 242
F+ D +V N +I +
Sbjct: 197 FIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGK 256
Query: 243 CGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSM 302
C I ++ +F EMG ++ +SW +++ Y++ ++A ++ + +++ ++ S ++ S+
Sbjct: 257 CKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSV 316
Query: 303 LTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREV 362
L+ CA + L+ GR IH+ + ++ +G+AL+DMY KCG ++ + + F++M + +
Sbjct: 317 LSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNL 376
Query: 363 STWNAMIGGLAIHGRAEDAMKLFTKM--NGEKRKPNGVTFVGVLNACAHAGMVERGLGLF 420
T N++IGG A G+ + A+ LF +M G PN +TFV +L+AC+ AG VE G+ +F
Sbjct: 377 VTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIF 436
Query: 421 NSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGN 480
+SM+ Y IEP EH+ C+VD+LGRAG+VE A +FI+ MP++P ++VWGAL NACR+HG
Sbjct: 437 DSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGK 496
Query: 481 VELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMD 540
+LG L ++P++SG + LLSN +A AGRW + VR+ +K GI+ G S +
Sbjct: 497 PQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWIT 556
Query: 541 MGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQH 600
+ +VH F+ D SH KEI L K+ ++++ GY P+ + YD+EEEEK + H
Sbjct: 557 VKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHH 616
Query: 601 SEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNG 660
SEK+ALAFGLL + I KNLR+C DCHS FK VS II+RD R+H FK+G
Sbjct: 617 SEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDG 676
Query: 661 MCSCKDFW 668
+CSCKD+W
Sbjct: 677 ICSCKDYW 684
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 414 bits (1065), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/674 (34%), Positives = 366/674 (54%), Gaps = 49/674 (7%)
Query: 39 KCFHSLQHL---KQAHAIILKTAHFHDHFVSGTLLKCY-ANPNFNNFTLATKVFDCIPRP 94
K F SL+ + +Q H ILK+ + V +L+ Y N ++ A KVFD +
Sbjct: 203 KSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDS---ARKVFDEMTER 259
Query: 95 NVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFH 154
+V N + G + NG K +S + +M+V + T ++F CA + + G H
Sbjct: 260 DVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVH 319
Query: 155 AFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGE 214
+ VK + + + + MY+ G A+ + E + V+ + +MI GY + G
Sbjct: 320 SIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFRE--MSDRSVVSYTSMIAGYAREGL 377
Query: 215 VEAANEVFVNM------PD--------------------KNVGSW-------------NA 235
A ++F M PD K V W NA
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNA 437
Query: 236 MISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREK-IKP 294
++ A+CG ++ A +F EM +D ISW+ II GY K EAL +F+ + EK P
Sbjct: 438 LMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSP 497
Query: 295 SRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVF 354
+ +L CA++ + D+GR IH ++ RN D + +L+DMY KCG L +A +F
Sbjct: 498 DERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLF 557
Query: 355 EKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVE 414
+ + +++ +W MI G +HG ++A+ LF +M + + ++FV +L AC+H+G+V+
Sbjct: 558 DDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVD 617
Query: 415 RGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNA 474
G FN M+ +IEP +EH+ C+VD+L R G + +A +FIE+MP+ P+ +WGALL
Sbjct: 618 EGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCG 677
Query: 475 CRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVP 534
CRIH +V+L E+V + ++EP N+G Y L++NIYA+A +W+ V R+RK + +RG+ P
Sbjct: 678 CRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNP 737
Query: 535 GSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKE 594
G S +++ G+V+ F GDSS+P+ + I L K+ ++ EGYSP T D EE EKE
Sbjct: 738 GCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKE 797
Query: 595 TVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRY 654
L HSEK+A+A G++ + G + + KNLRVC DCH K +SK+ I++RD R+
Sbjct: 798 EALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRF 857
Query: 655 HHFKNGMCSCKDFW 668
H FK+G CSC+ FW
Sbjct: 858 HQFKDGHCSCRGFW 871
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 212/445 (47%), Gaps = 46/445 (10%)
Query: 76 PNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYP 135
N + A++VFD + NI + ++G+ +I + KMM + +T+
Sbjct: 140 TNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFS 199
Query: 136 TLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKT 195
+ K+ + SV G Q H F++K G + ++ + Y ARK+ DE T
Sbjct: 200 CVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDE--MT 257
Query: 196 QTDVICWNAMIDGYLKCGEVEAANEVFVNM-------------------PDKNVGSW--- 233
+ DVI WN++I+GY+ G E VFV M D + S
Sbjct: 258 ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRA 317
Query: 234 -----------------NAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRC 276
N ++ ++CG +++A+ +F EM +R +S++++I GY ++
Sbjct: 318 VHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGL 377
Query: 277 FKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTA 336
EA+++F +M+ E I P + + ++L CA LD+G+ +H +++ N + D + A
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNA 437
Query: 337 LIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKR-KP 395
L+DMY KCG + A VF +M+V+++ +WN +IGG + + A +A+ LF + EKR P
Sbjct: 438 LMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSP 497
Query: 396 NGVTFVGVLNACAHAGMVERGLGLFNS-MKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEK 454
+ T VL ACA ++G + M+ Y + + + +VD+ + G + A
Sbjct: 498 DERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVAN--SLVDMYAKCGALLLAHM 555
Query: 455 FIESMPVKPNVAVWGALLNACRIHG 479
+ + K V+ W ++ +HG
Sbjct: 556 LFDDIASKDLVS-WTVMIAGYGMHG 579
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 198/447 (44%), Gaps = 67/447 (14%)
Query: 78 FNNFTLATKVFDCIPRPNVFV-----CNIYLKGSIENGEPHKAISCYHKMMVLNSR--PN 130
FN +L T V DC+ F N L+ E+G A+ K++ ++ + +
Sbjct: 39 FNRASLRT-VSDCVDSITTFDRSVTDANTQLRRFCESGNLENAV----KLLCVSGKWDID 93
Query: 131 KFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLD 190
T ++ + CA + S+K+G + F+ G D ++ S MY + G +EA ++ D
Sbjct: 94 PRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFD 153
Query: 191 ESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNV-------------------- 230
E + + WN +++ K G+ + +F M V
Sbjct: 154 EVKIEKA--LFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 211
Query: 231 -------------------GSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGY 271
N++++ + +++AR +FDEM ERD ISW++II+GY
Sbjct: 212 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 271
Query: 272 IKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDA 331
+ ++ L VF QM I+ + S+ CA+ + GR +HS + +
Sbjct: 272 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 331
Query: 332 VLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGE 391
L+DMY KCG LD A VF +M R V ++ +MI G A G A +A+KLF +M E
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 391
Query: 392 KRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPE----MEHF--GCVVDLLGR 445
P+ T VLN CA +++ G KRV+E E + F ++D+ +
Sbjct: 392 GISPDVYTVTAVLNCCARYRLLDEG-------KRVHEWIKENDLGFDIFVSNALMDMYAK 444
Query: 446 AGLVEEAEKFIESMPVKPNVAVWGALL 472
G ++EAE M VK ++ W ++
Sbjct: 445 CGSMQEAELVFSEMRVK-DIISWNTII 470
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 176/414 (42%), Gaps = 52/414 (12%)
Query: 163 TGDVHIKSAGIQM--YASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANE 220
T D + A Q+ + G A K+L SGK D +++ ++ E
Sbjct: 56 TFDRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPRTLCSVLQLCADSKSLKDGKE 115
Query: 221 V--FVN----MPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQ 274
V F+ + D N+GS +++ CG ++ A +FDE+ + W+ +++ K
Sbjct: 116 VDNFIRGNGFVIDSNLGSKLSLM--YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKS 173
Query: 275 RCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLG 334
F ++ +F +M ++ + + +++ S+ G +H F+ ++ +G
Sbjct: 174 GDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVG 233
Query: 335 TALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRK 394
+L+ Y+K R+D A +VF++M R+V +WN++I G +G AE + +F +M +
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 293
Query: 395 PNGVTFVGVLNACAHAGMVERG----------------------------LGLFNSMKRV 426
+ T V V CA + ++ G G +S K V
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAV 353
Query: 427 YE--IEPEMEHFGCVVDLLGRAGLVEEAEKFIESMP---VKPNVAVWGALLNACRIHGNV 481
+ + + + ++ R GL EA K E M + P+V A+LN C + +
Sbjct: 354 FREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLL 413
Query: 482 ELGERV-GWILLDMEPRNSGRYALLSN----IYAKAGRWDDVARVRKLMKERGI 530
+ G+RV WI + + G +SN +YAK G + V M+ + I
Sbjct: 414 DEGKRVHEWI----KENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDI 463
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 414 bits (1065), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/625 (33%), Positives = 355/625 (56%), Gaps = 42/625 (6%)
Query: 84 ATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVL-NSRPNKFTYPTLFKACA 142
A K+FD +P NV +KG +G + + + M SRPN+F +FK+C+
Sbjct: 88 ARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCS 147
Query: 143 VTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICW 202
+G ++EG QFH +K GL +++ + MY+ EA ++LD+ D+ +
Sbjct: 148 NSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDD--LPYCDLSVF 205
Query: 203 NAMIDGYLKCGEVE--------AANEVFV--------------NMPDKN----------- 229
++ + GYL+CG + ANE FV N+ D N
Sbjct: 206 SSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVR 265
Query: 230 ------VGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEV 283
V + A+I+ +CG + A+ +FD+ ++ + I+D Y + + F+EAL +
Sbjct: 266 FGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNL 325
Query: 284 FHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVK 343
F +M +++ P+ + +L A + L QG +H V ++ + ++G AL++MY K
Sbjct: 326 FSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAK 385
Query: 344 CGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGV 403
G ++ A + F M R++ TWN MI G + HG +A++ F +M PN +TF+GV
Sbjct: 386 SGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGV 445
Query: 404 LNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKP 463
L AC+H G VE+GL FN + + ++++P+++H+ C+V LL +AG+ ++AE F+ + P++
Sbjct: 446 LQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEW 505
Query: 464 NVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRK 523
+V W LLNAC + N LG++V ++ P +SG Y LLSNI+AK+ W+ VA+VR
Sbjct: 506 DVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRS 565
Query: 524 LMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSM 583
LM RG++ PG S + + + H F D+ HP++ IY ++++M K++ GYSP+ +
Sbjct: 566 LMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAG 625
Query: 584 VSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFKLVSKIYG 643
+D++EE++E L HSEK+A+A+GL+ + L++ KN+R+C DCHSA KL+SKI
Sbjct: 626 AFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISK 685
Query: 644 HNIIMRDRVRYHHFKNGMCSCKDFW 668
I++RD R+HHF +G CSC D+W
Sbjct: 686 RYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 6/123 (4%)
Query: 299 LPSMLTVCANVGSLDQGRWIHSFV---ERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFE 355
L +L VCAN L G IH+ + ++S DA +LI++YVKC A ++F+
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 356 KMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKM--NGEKRKPNGVTFVGVLNACAHAGMV 413
M R V +W AM+ G G + +KLF M +GE R PN V +C+++G +
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESR-PNEFVATVVFKSCSNSGRI 152
Query: 414 ERG 416
E G
Sbjct: 153 EEG 155
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 414 bits (1064), Expect = e-115, Method: Compositional matrix adjust.
Identities = 250/656 (38%), Positives = 357/656 (54%), Gaps = 109/656 (16%)
Query: 44 LQHLKQAHAIILKTAHFHDH---FVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCN 100
+ LKQ HA L+T + + F+ G +L+ + +F++ A +VFD
Sbjct: 61 MSQLKQLHAFTLRTTYPEEPATLFLYGKILQ--LSSSFSDVNYAFRVFD----------- 107
Query: 101 IYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQ 160
SIEN + F + TL +ACA
Sbjct: 108 -----SIENH-------------------SSFMWNTLIRACA------------------ 125
Query: 161 GLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTD------VICWNAMIDGYLKCGE 214
DV K +Y RKML E G++ D V+ A I G+ + +
Sbjct: 126 ---HDVSRKEEAFMLY---------RKML-ERGESSPDKHTFPFVLKACAYIFGFSEGKQ 172
Query: 215 VEA-------ANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAI 267
V +V+VN N +I CG ++ AR +FDEM ER +SW+++
Sbjct: 173 VHCQIVKHGFGGDVYVN---------NGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSM 223
Query: 268 IDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERN-- 325
ID ++ + AL++F +MQR +P + + S+L+ CA +GSL G W H+F+ R
Sbjct: 224 IDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCD 282
Query: 326 -SIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKL 384
+ +D ++ +LI+MY KCG L MA +VF+ M+ R++++WNAMI G A HGRAE+AM
Sbjct: 283 VDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNF 342
Query: 385 FTKM--NGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDL 442
F +M E +PN VTFVG+L AC H G V +G F+ M R Y IEP +EH+GC+VDL
Sbjct: 343 FDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDL 402
Query: 443 LGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHG-NVELGERVGWILL----DMEPR 497
+ RAG + EA + SMP+KP+ +W +LL+AC G +VEL E + ++ D E
Sbjct: 403 IARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESS 462
Query: 498 N---SGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSS 554
N SG Y LLS +YA A RW+DV VRKLM E GI PG S +++ G HEF GD+S
Sbjct: 463 NGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTS 522
Query: 555 HPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSY--DIEEEEKETVLKQHSEKIALAFGLLH 612
HPQ K+IY L+ + D+L+ GY P+ S + KE L+ HSE++A+AFGL++
Sbjct: 523 HPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLIN 582
Query: 613 AKPGTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
P T + I KNLRVC DCH KL+SK++ II+RDRVR+HHFK+G CSC D+W
Sbjct: 583 LPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 413 bits (1062), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/657 (34%), Positives = 356/657 (54%), Gaps = 40/657 (6%)
Query: 49 QAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIE 108
Q H +++K VS +L+ Y N A +FD +V N + G
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCG--NVRKARILFDKTEVKSVVTWNSMISGYAA 272
Query: 109 NGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHI 168
NG +A+ ++ M + R ++ ++ ++ K CA ++ Q H VVK G D +I
Sbjct: 273 NGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332
Query: 169 KSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDK 228
++A + Y+ +A ++ E G +V+ W AMI G+L+ E A ++F M K
Sbjct: 333 RTALMVAYSKCTAMLDALRLFKEIG-CVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391
Query: 229 NV-----------------------------------GSWNAMISGLARCGMIENARTLF 253
V A++ + G +E A +F
Sbjct: 392 GVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVF 451
Query: 254 DEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANV-GSL 312
+ ++D ++WSA++ GY + + A+++F ++ + IKP+ S+L VCA S+
Sbjct: 452 SGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASM 511
Query: 313 DQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGL 372
QG+ H F ++ + + +AL+ MY K G ++ A EVF++ + +++ +WN+MI G
Sbjct: 512 GQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGY 571
Query: 373 AIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPE 432
A HG+A A+ +F +M K K +GVTF+GV AC HAG+VE G F+ M R +I P
Sbjct: 572 AQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPT 631
Query: 433 MEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILL 492
EH C+VDL RAG +E+A K IE+MP +W +L ACR+H ELG ++
Sbjct: 632 KEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKII 691
Query: 493 DMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGD 552
M+P +S Y LLSN+YA++G W + A+VRKLM ER ++ PG S +++ K + F GD
Sbjct: 692 AMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGD 751
Query: 553 SSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLH 612
SHP +IY+ LE + +L+ GY P+TS V DI++E KE VL QHSE++A+AFGL+
Sbjct: 752 RSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIA 811
Query: 613 AKPGTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHF-KNGMCSCKDFW 668
G+ L I+KNLRVC DCH KL++KI I++RD R+HHF +G+CSC DFW
Sbjct: 812 TPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 218/480 (45%), Gaps = 63/480 (13%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSI 107
+Q H +K D V +L+ Y + NF KVFD + NV + G
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGS--NFKDGRKVFDEMKERNVVTWTTLISGYA 170
Query: 108 ENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVH 167
N + ++ + +M ++PN FT+ A G G+Q H VVK GL +
Sbjct: 171 RNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIP 230
Query: 168 IKSAGIQMYASFGLFREARKMLDESGKTQT-DVICWNAMIDGYLKCGEVEAANEVFVNMP 226
+ ++ I +Y G R+AR + D KT+ V+ WN+MI GY G A +F +M
Sbjct: 231 VSNSLINLYLKCGNVRKARILFD---KTEVKSVVTWNSMISGYAANGLDLEALGMFYSMR 287
Query: 227 -----------------------------------------DKNVGSWNAMISGLARCGM 245
D+N+ + A++ ++C
Sbjct: 288 LNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRT--ALMVAYSKCTA 345
Query: 246 IENARTLFDEMG-ERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLT 304
+ +A LF E+G + +SW+A+I G+++ +EA+++F +M+R+ ++P+ +LT
Sbjct: 346 MLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT 405
Query: 305 VCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVST 364
+ + +H+ V + + + + +GTAL+D YVK G+++ A +VF + +++
Sbjct: 406 ALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVA 461
Query: 365 WNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMK 424
W+AM+ G A G E A+K+F ++ KPN TF +LN CA A G G
Sbjct: 462 WSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCA-ATNASMGQG---KQF 517
Query: 425 RVYEIEPEMEHFGCV----VDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGN 480
+ I+ ++ CV + + + G +E AE+ + K V+ W ++++ HG
Sbjct: 518 HGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVS-WNSMISGYAQHGQ 576
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 165/353 (46%), Gaps = 43/353 (12%)
Query: 222 FVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEAL 281
F + D +VG+ +++ + ++ R +FDEM ER+ ++W+ +I GY + E L
Sbjct: 122 FGFLDDVSVGT--SLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVL 179
Query: 282 EVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMY 341
+F +MQ E +P+ + L V A G +G +H+ V +N + + +LI++Y
Sbjct: 180 TLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLY 239
Query: 342 VKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFV 401
+KCG + A +F+K +V+ V TWN+MI G A +G +A+ +F M + + +F
Sbjct: 240 LKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFA 299
Query: 402 GVLNACA-----------HAGMVERGLGLFNSMKRV-----YEIEPEM-------EHFGC 438
V+ CA H +V+ G LF+ R Y M + GC
Sbjct: 300 SVIKLCANLKELRFTEQLHCSVVKYGF-LFDQNIRTALMVAYSKCTAMLDALRLFKEIGC 358
Query: 439 VVDLLGRAGLV---------EEAEKFIESMP---VKPNVAVWGALLNACRIHGNVELGER 486
V +++ ++ EEA M V+PN + +L A + E+ +
Sbjct: 359 VGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQ 418
Query: 487 VGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMM 539
V + + E ++ ALL + Y K G+ ++ A+V + ++ I V S+M+
Sbjct: 419 V--VKTNYERSSTVGTALL-DAYVKLGKVEEAAKVFSGIDDKDI--VAWSAML 466
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 113/241 (46%), Gaps = 2/241 (0%)
Query: 239 GLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHL 298
G + NA LFD+ RD S+ +++ G+ + +EA +F + R ++ +
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 299 LPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMK 358
S+L V A + GR +H + D +GT+L+D Y+K +VF++MK
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 359 VREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLG 418
R V TW +I G A + ++ + LF +M E +PN TF L A G+ RGL
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 419 LFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIH 478
+ + + ++ + +++L + G V +A + VK +V W ++++ +
Sbjct: 216 VHTVVVK-NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK-SVVTWNSMISGYAAN 273
Query: 479 G 479
G
Sbjct: 274 G 274
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 413 bits (1061), Expect = e-115, Method: Compositional matrix adjust.
Identities = 234/665 (35%), Positives = 366/665 (55%), Gaps = 52/665 (7%)
Query: 52 AIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGE 111
++KT HF G L N+F A KVFD + NV + + ++ G
Sbjct: 190 GFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGF 249
Query: 112 PHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSA 171
P +AI + M++ +KFT ++F ACA ++ G Q H++ ++ GL DV + +
Sbjct: 250 PREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDV--ECS 307
Query: 172 GIQMYA---SFGLFREARKMLDESGKTQTDVICWNAMIDGYLK-C--------------- 212
+ MYA + G + RK+ D V+ W A+I GY+K C
Sbjct: 308 LVDMYAKCSADGSVDDCRKVFDR--MEDHSVMSWTALITGYMKNCNLATEAINLFSEMIT 365
Query: 213 -GEVEAANEVFV-------NMPDKNVGSW-----------------NAMISGLARCGMIE 247
G VE + F N+ D VG N++IS + +E
Sbjct: 366 QGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRME 425
Query: 248 NARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCA 307
+A+ F+ + E++ +S++ +DG + F++A ++ ++ ++ S S+L+ A
Sbjct: 426 DAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVA 485
Query: 308 NVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNA 367
NVGS+ +G IHS V + + + + ALI MY KCG +D A VF M+ R V +W +
Sbjct: 486 NVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTS 545
Query: 368 MIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVY 427
MI G A HG A ++ F +M E KPN VT+V +L+AC+H G+V G FNSM +
Sbjct: 546 MITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDH 605
Query: 428 EIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERV 487
+I+P+MEH+ C+VDLL RAGL+ +A +FI +MP + +V VW L ACR+H N ELG+
Sbjct: 606 KIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLA 665
Query: 488 GWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHE 547
+L+++P Y LSNIYA AG+W++ +R+ MKER + G S +++G K+H+
Sbjct: 666 ARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHK 725
Query: 548 FKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKET----VLKQHSEK 603
F +GD++HP +IY L++++ +++ GY P+T +V + +EEE E +L QHSEK
Sbjct: 726 FYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEK 785
Query: 604 IALAFGLLHAKPGTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCS 663
IA+AFGL+ + + KNLRVC DCH+A K +S + G I++RD R+HHFK+G CS
Sbjct: 786 IAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCS 845
Query: 664 CKDFW 668
C D+W
Sbjct: 846 CNDYW 850
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 141/340 (41%), Gaps = 42/340 (12%)
Query: 233 WNAMISGLARCGMIENARTLFDEM---GERDEISWSAIIDGYIKQRCFKEALEVFHQMQR 289
+N++IS ++ G A +F+ M G+RD +SWSA++ Y +A++VF +
Sbjct: 100 YNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLE 159
Query: 290 EKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNS-IQVDAVLGTALIDMYVKC-GRL 347
+ P+ + +++ C+N + GR F+ + + D +G +LIDM+VK
Sbjct: 160 LGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSF 219
Query: 348 DMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNAC 407
+ A++VF+KM V TW MI G +A++ F M + + T V +AC
Sbjct: 220 ENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSAC 279
Query: 408 A-----------HAGMVERGL------------------GLFNSMKRVY---EIEPEMEH 435
A H+ + GL G + ++V+ E M
Sbjct: 280 AELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSW 339
Query: 436 FGCVVDLLGRAGLVEEAEKFIESM----PVKPNVAVWGALLNACRIHGNVELGERV-GWI 490
+ + L EA M V+PN + + AC + +G++V G
Sbjct: 340 TALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQA 399
Query: 491 LLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGI 530
NS + +++ K+ R +D R + + E+ +
Sbjct: 400 FKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNL 439
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 8/205 (3%)
Query: 277 FKEALEVFHQMQREKIKPSRHL-LPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGT 335
+ A+ M R+ I+P + S+L C G+ +H+ + I+ D+VL
Sbjct: 42 LRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYN 101
Query: 336 ALIDMYVKCGRLDMAWEVFEKMK---VREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEK 392
+LI +Y K G A +VFE M+ R+V +W+AM+ +GR DA+K+F +
Sbjct: 102 SLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELG 161
Query: 393 RKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGC-VVDLLGRA-GLVE 450
PN + V+ AC+++ V G + + E ++ GC ++D+ + E
Sbjct: 162 LVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDV-CVGCSLIDMFVKGENSFE 220
Query: 451 EAEKFIESMPVKPNVAVWGALLNAC 475
A K + M + NV W ++ C
Sbjct: 221 NAYKVFDKMS-ELNVVTWTLMITRC 244
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 412 bits (1059), Expect = e-115, Method: Compositional matrix adjust.
Identities = 237/708 (33%), Positives = 364/708 (51%), Gaps = 91/708 (12%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSI 107
+ AHA+ L T + FV L+ Y+ + + A KVFD + +V N ++
Sbjct: 147 ESAHALSLVTGFISNVFVGNALVAMYSR--CRSLSDARKVFDEMSVWDVVSWNSIIESYA 204
Query: 108 ENGEPHKAISCYHKMM-VLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDV 166
+ G+P A+ + +M RP+ T + CA G+ G Q H F V + ++
Sbjct: 205 KLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNM 264
Query: 167 HIKSAGIQMYASFGLFREARKMLD---------------------------------ESG 193
+ + + MYA G+ EA + +
Sbjct: 265 FVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEE 324
Query: 194 KTQTDVICWNAMIDGYLK--------------------------------CGEVEA---- 217
K + DV+ W+A I GY + C V A
Sbjct: 325 KIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHG 384
Query: 218 ------ANEVFVNMPDKNVGSWNAMISGL----ARCGMIENARTLFDEMG--ERDEISWS 265
A + +++ G N +I+ L A+C ++ AR +FD + ERD ++W+
Sbjct: 385 KEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWT 444
Query: 266 AIIDGYIKQRCFKEALEVFHQMQRE--KIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVE 323
+I GY + +ALE+ +M E + +P+ + L CA++ +L G+ IH++
Sbjct: 445 VMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYAL 504
Query: 324 RNSIQVDAV---LGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAED 380
RN Q +AV + LIDMY KCG + A VF+ M + TW +++ G +HG E+
Sbjct: 505 RN--QQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEE 562
Query: 381 AMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVV 440
A+ +F +M K +GVT + VL AC+H+GM+++G+ FN MK V+ + P EH+ C+V
Sbjct: 563 ALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLV 622
Query: 441 DLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSG 500
DLLGRAG + A + IE MP++P VW A L+ CRIHG VELGE + ++ + G
Sbjct: 623 DLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDG 682
Query: 501 RYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKE 560
Y LLSN+YA AGRW DV R+R LM+ +G++ PG S ++ F +GD +HP KE
Sbjct: 683 SYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKE 742
Query: 561 IYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLH 620
IY +L M +++ GY P T +D+++EEK+ +L +HSEK+ALA+G+L G +
Sbjct: 743 IYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIR 802
Query: 621 IVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
I KNLRVC DCH+AF +S+I H+II+RD R+HHFKNG CSCK +W
Sbjct: 803 ITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/473 (27%), Positives = 216/473 (45%), Gaps = 89/473 (18%)
Query: 96 VFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHA 155
V+ N ++ +NG +K + + M L+ P+ +T+P +FKAC SV+ G HA
Sbjct: 92 VYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHA 151
Query: 156 FVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEV 215
+ G +V + +A + MY+ +ARK+ DE + DV+ WN++I+ Y K G+
Sbjct: 152 LSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDE--MSVWDVVSWNSIIESYAKLGKP 209
Query: 216 EAANEVFVNM-------PD---------------------------------KNVGSWNA 235
+ A E+F M PD +N+ N
Sbjct: 210 KVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNC 269
Query: 236 MISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREK---- 291
++ A+CGM++ A T+F M +D +SW+A++ GY + F++A+ +F +MQ EK
Sbjct: 270 LVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMD 329
Query: 292 -------------------------------IKPSRHLLPSMLTVCANVGSLDQGRWIHS 320
IKP+ L S+L+ CA+VG+L G+ IH
Sbjct: 330 VVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHC 389
Query: 321 FVERNSIQV-------DAVLGTALIDMYVKCGRLDMAWEVFEKM--KVREVSTWNAMIGG 371
+ + I + + ++ LIDMY KC ++D A +F+ + K R+V TW MIGG
Sbjct: 390 YAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGG 449
Query: 372 LAIHGRAEDAMKLFTKMNGE--KRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEI 429
+ HG A A++L ++M E + +PN T L ACA + G + R +
Sbjct: 450 YSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQN 509
Query: 430 EPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVE 482
+ C++D+ + G + +A ++M K N W +L+ +HG E
Sbjct: 510 AVPLFVSNCLIDMYAKCGSISDARLVFDNMMAK-NEVTWTSLMTGYGMHGYGE 561
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 159/346 (45%), Gaps = 47/346 (13%)
Query: 119 YHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYAS 178
Y K+ + ++ + T P + K C VK H ++ G+ +++ S I Y S
Sbjct: 17 YIKVSLFSTSAPEITPPFIHK-CKTISQVK---LIHQKLLSFGIL-TLNLTSHLISTYIS 71
Query: 179 FGLFREARKMLDESGKTQTDVICWNAMIDGY----------------------------- 209
G A +L + V WN++I Y
Sbjct: 72 VGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFP 131
Query: 210 -----------LKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGE 258
++CGE A + NV NA+++ +RC + +AR +FDEM
Sbjct: 132 FVFKACGEISSVRCGESAHALSLVTGFI-SNVFVGNALVAMYSRCRSLSDARKVFDEMSV 190
Query: 259 RDEISWSAIIDGYIKQRCFKEALEVFHQMQRE-KIKPSRHLLPSMLTVCANVGSLDQGRW 317
D +SW++II+ Y K K ALE+F +M E +P L ++L CA++G+ G+
Sbjct: 191 WDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQ 250
Query: 318 IHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGR 377
+H F + + + +G L+DMY KCG +D A VF M V++V +WNAM+ G + GR
Sbjct: 251 LHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGR 310
Query: 378 AEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSM 423
EDA++LF KM EK K + VT+ ++ A G+ LG+ M
Sbjct: 311 FEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQM 356
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 116/255 (45%), Gaps = 5/255 (1%)
Query: 236 MISGLARCGMIENARTLFDEMGERDE--ISWSAIIDGYIKQRCFKEALEVFHQMQREKIK 293
+IS G + +A +L D W+++I Y C + L +F M
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 294 PSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEV 353
P + P + C + S+ G H+ + +G AL+ MY +C L A +V
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 354 FEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGE-KRKPNGVTFVGVLNACAHAGM 412
F++M V +V +WN++I A G+ + A+++F++M E +P+ +T V VL CA G
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 413 VERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALL 472
G L + E+ M C+VD+ + G+++EA +M VK +V W A++
Sbjct: 245 HSLGKQL-HCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK-DVVSWNAMV 302
Query: 473 NACRIHGNVELGERV 487
G E R+
Sbjct: 303 AGYSQIGRFEDAVRL 317
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 412 bits (1059), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/669 (33%), Positives = 367/669 (54%), Gaps = 51/669 (7%)
Query: 43 SLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIY 102
SL +Q H + LK VS +L+ Y F A VFD + ++ N
Sbjct: 330 SLALGQQVHCMALKLGLDLMLTVSNSLINMYCK--LRKFGFARTVFDNMSERDLISWNSV 387
Query: 103 LKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGV----QFHAFVV 158
+ G +NG +A+ + +++ +P+++T ++ KA + S+ EG+ Q H +
Sbjct: 388 IAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS---SLPEGLSLSKQVHVHAI 444
Query: 159 KQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLK------- 211
K D + +A I Y+ +EA + + + D++ WNAM+ GY +
Sbjct: 445 KINNVSDSFVSTALIDAYSRNRCMKEAEILFE---RHNFDLVAWNAMMAGYTQSHDGHKT 501
Query: 212 -------------------------CGEVEAANE-----VFVNMPDKNVGSW--NAMISG 239
CG + A N+ + ++ W + ++
Sbjct: 502 LKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDM 561
Query: 240 LARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLL 299
+CG + A+ FD + D+++W+ +I G I+ + A VF QM+ + P +
Sbjct: 562 YVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTI 621
Query: 300 PSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKV 359
++ + + +L+QGR IH+ + + D +GT+L+DMY KCG +D A+ +F+++++
Sbjct: 622 ATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM 681
Query: 360 REVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGL 419
++ WNAM+ GLA HG ++ ++LF +M KP+ VTF+GVL+AC+H+G+V
Sbjct: 682 MNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKH 741
Query: 420 FNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHG 479
SM Y I+PE+EH+ C+ D LGRAGLV++AE IESM ++ + +++ LL ACR+ G
Sbjct: 742 MRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQG 801
Query: 480 NVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMM 539
+ E G+RV LL++EP +S Y LLSN+YA A +WD++ R +MK ++ PG S +
Sbjct: 802 DTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWI 861
Query: 540 DMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQ 599
++ K+H F + D S+ Q + IY ++ M+ ++ EGY P T D+EEEEKE L
Sbjct: 862 EVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYY 921
Query: 600 HSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKN 659
HSEK+A+AFGLL P T + ++KNLRVC DCH+A K ++K+Y I++RD R+H FK+
Sbjct: 922 HSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKD 981
Query: 660 GMCSCKDFW 668
G+CSC D+W
Sbjct: 982 GICSCGDYW 990
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 181/440 (41%), Gaps = 24/440 (5%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSI 107
K HA IL + F+ L+ Y+ + T A +VFD +P ++ N L
Sbjct: 59 KCTHARILTFEENPERFLINNLISMYSKCG--SLTYARRVFDKMPDRDLVSWNSILAAYA 116
Query: 108 ENGE-----PHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGL 162
++ E +A + + ++ T + K C +G V FH + K GL
Sbjct: 117 QSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGL 176
Query: 163 TGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVF 222
GD + A + +Y FG +E + + +E DV+ WN M+ YL+ G E A ++
Sbjct: 177 DGDEFVAGALVNIYLKFGKVKEGKVLFEE--MPYRDVVLWNLMLKAYLEMGFKEEAIDLS 234
Query: 223 VNMPDKNVGSWNAMISGLAR-CGMIENARTLFDEMGERDEISWSAII------DGYIKQR 275
+ + LAR G +A + D S S II Y+
Sbjct: 235 SAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSG 294
Query: 276 CFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGT 335
+ L+ F M ++ + ML V SL G+ +H + + + +
Sbjct: 295 QYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSN 354
Query: 336 ALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKP 395
+LI+MY K + A VF+ M R++ +WN++I G+A +G +A+ LF ++ KP
Sbjct: 355 SLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKP 414
Query: 396 NGVTFVGVLNACAHAGMVERGLGLFNSMK-RVYEIEPEMEHF--GCVVDLLGRAGLVEEA 452
+ T VL A A + GL L + +I + F ++D R ++EA
Sbjct: 415 DQYTMTSVLKA---ASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEA 471
Query: 453 EKFIESMPVKPNVAVWGALL 472
E E ++ W A++
Sbjct: 472 EILFERHNF--DLVAWNAMM 489
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 157/387 (40%), Gaps = 70/387 (18%)
Query: 6 TNFPSGLKPIELSSDQAPSSKLSQKTVLDILNKKC--FHSLQHLKQAHAIILKTAHFHDH 63
T G K ++L + + S L + K C ++ KQ HA +K+ + D
Sbjct: 493 TQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDL 552
Query: 64 FVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMM 123
+VS +L Y + + A FD IP P+ + G IENGE +A + +M
Sbjct: 553 WVSSGILDMYVKCG--DMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMR 610
Query: 124 VLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFR 183
++ P++FT TL KA + ++++G Q HA +K T D + ++ + MYA
Sbjct: 611 LMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYA------ 664
Query: 184 EARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARC 243
KCG ++ A +F + N+ +WNAM+ GLA+
Sbjct: 665 ---------------------------KCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQH 697
Query: 244 GMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSML 303
G +G KE L++F QM+ IKP + +L
Sbjct: 698 G------------------------EG-------KETLQLFKQMKSLGIKPDKVTFIGVL 726
Query: 304 TVCANVGSLDQG-RWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR-E 361
+ C++ G + + + + S I+ + + L D + G + A + E M +
Sbjct: 727 SACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEAS 786
Query: 362 VSTWNAMIGGLAIHGRAEDAMKLFTKM 388
S + ++ + G E ++ TK+
Sbjct: 787 ASMYRTLLAACRVQGDTETGKRVATKL 813
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 409 bits (1050), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/662 (33%), Positives = 343/662 (51%), Gaps = 46/662 (6%)
Query: 49 QAHAIILKTAHFHDHF--VSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGS 106
Q HA +K + F VS LLK Y LA +F+ IP + N + G
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCE--VRRLDLACVLFEEIPEKDSVTFNTLITGY 225
Query: 107 IENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDV 166
++G ++I + KM +P+ FT+ + KA G Q HA V G + D
Sbjct: 226 EKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDA 285
Query: 167 HIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM- 225
+ + + Y+ E R + DE + D + +N +I Y + + EA+ F M
Sbjct: 286 SVGNQILDFYSKHDRVLETRMLFDE--MPELDFVSYNVVISSYSQADQYEASLHFFREMQ 343
Query: 226 --------------------------------------PDKNVGSWNAMISGLARCGMIE 247
D + N+++ A+C M E
Sbjct: 344 CMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFE 403
Query: 248 NARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCA 307
A +F + +R +SW+A+I GY+++ L++F +M+ ++ + ++L A
Sbjct: 404 EAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASA 463
Query: 308 NVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNA 367
+ SL G+ +H+F+ R+ + G+ L+DMY KCG + A +VFE+M R +WNA
Sbjct: 464 SFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNA 523
Query: 368 MIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVY 427
+I A +G E A+ F KM +P+ V+ +GVL AC+H G VE+G F +M +Y
Sbjct: 524 LISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIY 583
Query: 428 EIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERV 487
I P+ +H+ C++DLLGR G EAEK ++ MP +P+ +W ++LNACRIH N L ER
Sbjct: 584 GITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERA 643
Query: 488 GWILLDMEP-RNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVH 546
L ME R++ Y +SNIYA AG W+ V V+K M+ERGI+ VP S +++ K+H
Sbjct: 644 AEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIH 703
Query: 547 EFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQHSEKIAL 606
F D +HP EI + ++ +++ EGY P+TS V D++E+ K LK HSE++A+
Sbjct: 704 VFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAV 763
Query: 607 AFGLLHAKPGTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKD 666
AF L+ G + ++KNLR C DCH+A KL+SKI I +RD R+HHF G+CSC D
Sbjct: 764 AFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGD 823
Query: 667 FW 668
+W
Sbjct: 824 YW 825
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 114/226 (50%), Gaps = 6/226 (2%)
Query: 197 TDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEM 256
TD N +++ L+ G+V AA +V+ MP KN S N MISG + G + +AR LFD M
Sbjct: 46 TDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAM 105
Query: 257 GERDEISWSAIIDGYIKQRCFKEALEVFHQMQREK--IKPSRHLLPSMLTVCANVGSLDQ 314
+R ++W+ ++ Y + F EA ++F QM R P ++L C + +
Sbjct: 106 PDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNA 165
Query: 315 GRWIHSFVERNSIQVDAVLGTA--LIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGL 372
+H+F + + L + L+ Y + RLD+A +FE++ ++ T+N +I G
Sbjct: 166 VGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGY 225
Query: 373 AIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLG 418
G +++ LF KM +P+ TF GVL A G+ + LG
Sbjct: 226 EKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV--VGLHDFALG 269
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/402 (20%), Positives = 161/402 (40%), Gaps = 55/402 (13%)
Query: 84 ATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAV 143
A KV+D +P N N + G ++ G+ A + M P++ V
Sbjct: 67 ARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAM------PDR---------TVV 111
Query: 144 TGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWN 203
T ++ G + H A F LFR+ M S T D + +
Sbjct: 112 TWTILMG----------WYARNSHFDEA-------FKLFRQ---MCRSSSCTLPDHVTFT 151
Query: 204 AMIDGYLKCGEVEAANEV-----------FVNMPDKNVGSWNAMISGLARCGMIENARTL 252
++ G C + N V F P V N ++ ++ A L
Sbjct: 152 TLLPG---CNDAVPQNAVGQVHAFAVKLGFDTNPFLTVS--NVLLKSYCEVRRLDLACVL 206
Query: 253 FDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSL 312
F+E+ E+D ++++ +I GY K + E++ +F +M++ +PS +L +
Sbjct: 207 FEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDF 266
Query: 313 DQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGL 372
G+ +H+ DA +G ++D Y K R+ +F++M + ++N +I
Sbjct: 267 ALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSY 326
Query: 373 AIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPE 432
+ + E ++ F +M F +L+ A+ ++ G L + +
Sbjct: 327 SQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQL--HCQALLATADS 384
Query: 433 MEHFG-CVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLN 473
+ H G +VD+ + + EEAE +S+P + V+ W AL++
Sbjct: 385 ILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVS-WTALIS 425
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 158/383 (41%), Gaps = 45/383 (11%)
Query: 43 SLQHLKQAHA-IILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNI 101
SLQ +Q H +L TA H V +L+ YA F A +F +P+
Sbjct: 366 SLQMGRQLHCQALLATADSILH-VGNSLVDMYAKCEM--FEEAELIFKSLPQRTTVSWTA 422
Query: 102 YLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQG 161
+ G ++ G + + KM N R ++ T+ T+ KA A S+ G Q HAF+++ G
Sbjct: 423 LISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSG 482
Query: 162 LTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEV 221
+V S + MYA G ++A ++ +E + + WNA+I + G+ EAA
Sbjct: 483 NLENVFSGSGLVDMYAKCGSIKDAVQVFEE--MPDRNAVSWNALISAHADNGDGEAAIGA 540
Query: 222 FVNMPDKNVGSWNAMISGL----ARCGMIENARTLFDEMGERDEIS-----WSAIIDGYI 272
F M + + + I G+ + CG +E F M I+ ++ ++D
Sbjct: 541 FAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLG 600
Query: 273 KQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIH---SFVERNSIQV 329
+ F EA ++ +M E P + S+L C IH S ER + ++
Sbjct: 601 RNGRFAEAEKLMDEMPFE---PDEIMWSSVLNACR----------IHKNQSLAERAAEKL 647
Query: 330 -------DAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAM 382
DA ++ ++Y G + +V + M+ R + A + E
Sbjct: 648 FSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPA-------YSWVEVNH 700
Query: 383 KLFTKMNGEKRKPNGVTFVGVLN 405
K+ + ++ PNG V +N
Sbjct: 701 KIHVFSSNDQTHPNGDEIVRKIN 723
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 105/240 (43%), Gaps = 9/240 (3%)
Query: 26 KLSQKTVLDILNKKC-FHSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLA 84
+ Q T +L F SL KQ HA I+++ + + F L+ YA + A
Sbjct: 449 RADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYA--KCGSIKDA 506
Query: 85 TKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVT 144
+VF+ +P N N + +NG+ AI + KM+ +P+ + + AC+
Sbjct: 507 VQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHC 566
Query: 145 GSVKEGVQ-FHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWN 203
G V++G + F A G+T + + + G F EA K++DE + D I W+
Sbjct: 567 GFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEM-PFEPDEIMWS 625
Query: 204 AMIDG---YLKCGEVEAANEVFVNMPD-KNVGSWNAMISGLARCGMIENARTLFDEMGER 259
++++ + E A E +M ++ ++ +M + A G E R + M ER
Sbjct: 626 SVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRER 685
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 406 bits (1044), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/578 (35%), Positives = 321/578 (55%), Gaps = 37/578 (6%)
Query: 95 NVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFH 154
N+ N L G +G +A+ + K+ L P++ T ++ + + + G H
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 155 AFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGE 214
+V+KQGL D + SA MID Y K G
Sbjct: 276 GYVIKQGLLKDKCVISA---------------------------------MIDMYGKSGH 302
Query: 215 VEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGER----DEISWSAIIDG 270
V +F G NA I+GL+R G+++ A +F+ E+ + +SW++II G
Sbjct: 303 VYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAG 362
Query: 271 YIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVD 330
+ EALE+F +MQ +KP+ +PSML C N+ +L GR H F R + +
Sbjct: 363 CAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDN 422
Query: 331 AVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNG 390
+G+ALIDMY KCGR++++ VF M + + WN+++ G ++HG+A++ M +F +
Sbjct: 423 VHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMR 482
Query: 391 EKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVE 450
+ KP+ ++F +L+AC G+ + G F M Y I+P +EH+ C+V+LLGRAG ++
Sbjct: 483 TRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQ 542
Query: 451 EAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYA 510
EA I+ MP +P+ VWGALLN+CR+ NV+L E L +EP N G Y LLSNIYA
Sbjct: 543 EAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYA 602
Query: 511 KAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMD 570
G W +V +R M+ G++ PG S + + +V+ GD SHPQ+ +I ++++
Sbjct: 603 AKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISK 662
Query: 571 KLQIEGYSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCAD 630
+++ G+ PN +D+EE+E+E +L HSEK+A+ FGLL+ GT L ++KNLR+C D
Sbjct: 663 EMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGD 722
Query: 631 CHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
CH+ K +S G I +RD R+HHFK+G+CSC DFW
Sbjct: 723 CHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 118/474 (24%), Positives = 198/474 (41%), Gaps = 78/474 (16%)
Query: 49 QAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIE 108
QAHA ILK+ +D ++S L+ Y+N +N F A V IP P ++ + + +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSN--YNCFNDADLVLQSIPDPTIYSFSSLIYALTK 93
Query: 109 NGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHI 168
++I + +M P+ P LFK CA + K G Q H GL D +
Sbjct: 94 AKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFV 153
Query: 169 KSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMP-- 226
+ + MY G +ARK+ D + DV+ +A++ Y + G +E + M
Sbjct: 154 QGSMFHMYMRCGRMGDARKVFDR--MSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 227 --DKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVF 284
+ N+ SWN ++SG R G KEA+ +F
Sbjct: 212 GIEANIVSWNGILSGFNRSGY-------------------------------HKEAVVMF 240
Query: 285 HQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKC 344
++ P + + S+L + L+ GR IH +V + + D + +A+IDMY K
Sbjct: 241 QKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKS 300
Query: 345 GR-------------------------------LDMAWEVFEKMKVR----EVSTWNAMI 369
G +D A E+FE K + V +W ++I
Sbjct: 301 GHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSII 360
Query: 370 GGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEI 429
G A +G+ +A++LF +M KPN VT +L AC + + G RV+ +
Sbjct: 361 AGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLL 420
Query: 430 EPEMEHFG-CVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVE 482
+ H G ++D+ + G + ++ MP K N+ W +L+N +HG +
Sbjct: 421 DN--VHVGSALIDMYAKCGRINLSQIVFNMMPTK-NLVCWNSLMNGFSMHGKAK 471
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 406 bits (1043), Expect = e-113, Method: Compositional matrix adjust.
Identities = 240/653 (36%), Positives = 358/653 (54%), Gaps = 59/653 (9%)
Query: 35 ILNKKCFHS--LQHLKQAHAII----LKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVF 88
+L + C H L+ K+ HA++ LK A ++S L + YA+ A K+F
Sbjct: 11 LLLRHCAHRSFLRPGKELHAVLTTSGLKKAP--RSYLSNALFQFYASSG--EMVTAQKLF 66
Query: 89 DCIP---RPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTG 145
D IP + NV + L G ++ + +M + + LF CA
Sbjct: 67 DEIPLSEKDNVDWTTL-LSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLE 125
Query: 146 SVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAM 205
+ Q H VK G+ T V NA+
Sbjct: 126 DLGFAQQGHGVAVKMGVL---------------------------------TSVKVCNAL 152
Query: 206 IDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWS 265
+D Y KCG V +F + +K+V SW ++ + + +E R +F EM ER+ ++W+
Sbjct: 153 MDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWT 212
Query: 266 AIIDGYIKQRCFKEALEVFHQMQ-REKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVER 324
++ GY+ +E LE+ +M R + L SML+ CA G+L GRW+H + +
Sbjct: 213 VMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALK 272
Query: 325 NSIQV-------DAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGR 377
+ + D ++GTAL+DMY KCG +D + VF M+ R V TWNA+ GLA+HG+
Sbjct: 273 KEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGK 332
Query: 378 AEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFG 437
+ +F +M E KP+ +TF VL+AC+H+G+V+ G F+S+ R Y +EP+++H+
Sbjct: 333 GRMVIDMFPQMIREV-KPDDLTFTAVLSACSHSGIVDEGWRCFHSL-RFYGLEPKVDHYA 390
Query: 438 CVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPR 497
C+VDLLGRAGL+EEAE + MPV PN V G+LL +C +HG VE+ ER+ L+ M P
Sbjct: 391 CMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPG 450
Query: 498 NSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQ 557
N+ L+SN+Y GR D +R +++RGI +PG S + + VH F GD SHP+
Sbjct: 451 NTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPR 510
Query: 558 MKEIYLMLEKMMDKLQIEGYSPNTS-MVSY-DIEEEEKETVLKQHSEKIALAFGLLHAKP 615
KEIYL L +++++++ GY P+ S +VS+ + + EEKE L HSEK+A+ FGLL KP
Sbjct: 511 TKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDLEEKEQALCCHSEKLAVCFGLLETKP 570
Query: 616 GTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
T L + KNLR+C DCHSA K+VSK+Y II+RDR R+H FK G CSC D+W
Sbjct: 571 STPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGGSCSCSDYW 623
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust.
Identities = 229/640 (35%), Positives = 346/640 (54%), Gaps = 46/640 (7%)
Query: 41 FHSLQHLKQAHAIILKTAHFHDHFVSGTLLKC--YANPNFNNF------TLATKVFDCIP 92
H LQ + + A H H V +++C AN N + + A +VFD +P
Sbjct: 7 LHQLQLCARNRTLTTAKA-LHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMP 65
Query: 93 -RPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGV 151
R ++ ++ + N RP+ F + L KACA GS+ G
Sbjct: 66 HRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGR 125
Query: 152 QFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLK 211
Q H + D +KS+ + MYA K
Sbjct: 126 QVHCHFIVSEYANDEVVKSSLVDMYA---------------------------------K 152
Query: 212 CGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGY 271
CG + +A VF ++ KN SW AM+SG A+ G E A LF + ++ SW+A+I G+
Sbjct: 153 CGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGF 212
Query: 272 IKQRCFKEALEVFHQMQREKIKPSRHL-LPSMLTVCANVGSLDQGRWIHSFVERNSIQVD 330
++ EA VF +M+RE++ L L S++ CAN+ + GR +H V
Sbjct: 213 VQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSC 272
Query: 331 AVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNG 390
+ ALIDMY KC + A ++F +M+ R+V +W ++I G+A HG+AE A+ L+ M
Sbjct: 273 VFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVS 332
Query: 391 EKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVE 450
KPN VTFVG++ AC+H G VE+G LF SM + Y I P ++H+ C++DLLGR+GL++
Sbjct: 333 HGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLD 392
Query: 451 EAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVG-WILLDMEPRNSGRYALLSNIY 509
EAE I +MP P+ W ALL+AC+ G ++G R+ ++ + ++ Y LLSNIY
Sbjct: 393 EAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIY 452
Query: 510 AKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMM 569
A A W V+ R+ + E + PG S +++ + F G++SHP ++I+ +L+K+
Sbjct: 453 ASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLE 512
Query: 570 DKLQIE-GYSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVC 628
++++I GY P+TS + +D++E+EKE +L HSE+ A+A+GLL A PGT + IVKNLRVC
Sbjct: 513 EEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVC 572
Query: 629 ADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
DCH K +S+I II+RD RYHHFK G CSC DFW
Sbjct: 573 GDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 405 bits (1041), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/632 (34%), Positives = 341/632 (53%), Gaps = 46/632 (7%)
Query: 78 FNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTL 137
FN L + F P V + + NG +A+ +M +L Y L
Sbjct: 2 FNLMRLIHRSFSSSPTNYVLQTILPISQLCSNGRLQEALL---EMAMLGPEMGFHGYDAL 58
Query: 138 FKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQT 197
AC ++++G + HA ++K ++++ + Y +ARK+LDE +
Sbjct: 59 LNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDE--MPEK 116
Query: 198 DVICWNAMIDGYLKCGEVEAANEVFVNMPDKN---------------------------- 229
+V+ W AMI Y + G A VF M +
Sbjct: 117 NVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIH 176
Query: 230 --VGSWN---------AMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFK 278
+ WN +++ A+ G I+ AR +F+ + ERD +S +AII GY + +
Sbjct: 177 GLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDE 236
Query: 279 EALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALI 338
EALE+FH++ E + P+ S+LT + + LD G+ H V R + AVL +LI
Sbjct: 237 EALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLI 296
Query: 339 DMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKR-KPNG 397
DMY KCG L A +F+ M R +WNAM+ G + HG + ++LF M EKR KP+
Sbjct: 297 DMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDA 356
Query: 398 VTFVGVLNACAHAGMVERGLGLFNSM-KRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFI 456
VT + VL+ C+H M + GL +F+ M Y +P EH+GC+VD+LGRAG ++EA +FI
Sbjct: 357 VTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFI 416
Query: 457 ESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWD 516
+ MP KP V G+LL ACR+H +V++GE VG L+++EP N+G Y +LSN+YA AGRW
Sbjct: 417 KRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWA 476
Query: 517 DVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEG 576
DV VR +M ++ + PG S + +H F D +HP+ +E+ ++++ K++ G
Sbjct: 477 DVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAG 536
Query: 577 YSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFK 636
Y P+ S V YD++EE+KE +L HSEK+AL FGL+ G + + KNLR+C DCH+ K
Sbjct: 537 YVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAK 596
Query: 637 LVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
+ SK++ + +RD+ R+H +G+CSC D+W
Sbjct: 597 IFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 174/389 (44%), Gaps = 53/389 (13%)
Query: 34 DILNKKCF--HSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCI 91
D L C +L+ ++ HA ++KT + ++ LL Y + A KV D +
Sbjct: 56 DALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGK--CDCLEDARKVLDEM 113
Query: 92 PRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGV 151
P NV + + G +A++ + +MM + +PN+FT+ T+ +C + G
Sbjct: 114 PEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGK 173
Query: 152 QFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLK 211
Q H +VK + + S+ + MYA G +EAR++ + + DV+ A+I GY +
Sbjct: 174 QIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFE--CLPERDVVSCTAIIAGYAQ 231
Query: 212 CGEVEAANEVFVNMPDKNVGS--------------------------------------- 232
G E A E+F + + +
Sbjct: 232 LGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVL 291
Query: 233 WNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREK- 291
N++I ++CG + AR LFD M ER ISW+A++ GY K +E LE+F M+ EK
Sbjct: 292 QNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKR 351
Query: 292 IKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGT----ALIDMYVKCGRL 347
+KP L ++L+ C++ D G ++ F + + GT ++DM + GR+
Sbjct: 352 VKPDAVTLLAVLSGCSHGRMEDTG--LNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRI 409
Query: 348 DMAWEVFEKMKVREVS-TWNAMIGGLAIH 375
D A+E ++M + + +++G +H
Sbjct: 410 DEAFEFIKRMPSKPTAGVLGSLLGACRVH 438
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 405 bits (1040), Expect = e-113, Method: Compositional matrix adjust.
Identities = 233/725 (32%), Positives = 367/725 (50%), Gaps = 105/725 (14%)
Query: 45 QHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVF------- 97
+++K H I++ + + F+ ++ YA + T A +VFD IP+PN+F
Sbjct: 23 RYVKMIHGNIIRALPYPETFLYNNIVHAYAL--MKSSTYARRVFDRIPQPNLFSWNNLLL 80
Query: 98 ------------------------VCNIYLKGSIENGEPHKAISCYHKMMV-LNSRPNKF 132
N+ ++G +G A+ Y+ MM ++ +
Sbjct: 81 AYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRV 140
Query: 133 TYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKM---L 189
T T+ K + G V G Q H V+K G + + S + MYA+ G +A+K+ L
Sbjct: 141 TLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGL 200
Query: 190 DESGKT-------------------------QTDVICWNAMIDGYLK------------- 211
D+ + D + W AMI G +
Sbjct: 201 DDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFRE 260
Query: 212 -------------------CGEVEAANE--------VFVNMPDK-NVGSWNAMISGLARC 243
CG + A NE + N D VGS A+I +C
Sbjct: 261 MKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGS--ALIDMYCKC 318
Query: 244 GMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSML 303
+ A+T+FD M +++ +SW+A++ GY + +EA+++F MQR I P + L +
Sbjct: 319 KCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAI 378
Query: 304 TVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVS 363
+ CANV SL++G H + + + +L+ +Y KCG +D + +F +M VR+
Sbjct: 379 SACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAV 438
Query: 364 TWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSM 423
+W AM+ A GRA + ++LF KM KP+GVT GV++AC+ AG+VE+G F M
Sbjct: 439 SWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLM 498
Query: 424 KRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVEL 483
Y I P + H+ C++DL R+G +EEA +FI MP P+ W LL+ACR GN+E+
Sbjct: 499 TSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEI 558
Query: 484 GERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGG 543
G+ L++++P + Y LLS+IYA G+WD VA++R+ M+E+ ++ PG S + G
Sbjct: 559 GKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKG 618
Query: 544 KVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQHSEK 603
K+H F D S P + +IY LE++ +K+ GY P+TS V +D+EE K +L HSE+
Sbjct: 619 KLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSER 678
Query: 604 IALAFGLLHAKPGTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCS 663
+A+AFGL+ G + + KNLRVC DCH+A K +S + G I++RD VR+H FK+G CS
Sbjct: 679 LAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCS 738
Query: 664 CKDFW 668
C DFW
Sbjct: 739 CGDFW 743
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 402 bits (1033), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/572 (37%), Positives = 318/572 (55%), Gaps = 40/572 (6%)
Query: 133 TYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDES 192
TY L K C +V EG + G + + + I MY F L +A ++ D+
Sbjct: 63 TYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQ- 121
Query: 193 GKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGS-------------------- 232
Q +VI W MI Y KC + A E+ V M NV
Sbjct: 122 -MPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM 180
Query: 233 ----------------WNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRC 276
+A+I A+ G E+A ++FDEM D I W++II G+ +
Sbjct: 181 LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSR 240
Query: 277 FKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTA 336
ALE+F +M+R + L S+L C + L+ G H + + D +L A
Sbjct: 241 SDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNA 298
Query: 337 LIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPN 396
L+DMY KCG L+ A VF +MK R+V TW+ MI GLA +G +++A+KLF +M KPN
Sbjct: 299 LVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPN 358
Query: 397 GVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFI 456
+T VGVL AC+HAG++E G F SMK++Y I+P EH+GC++DLLG+AG +++A K +
Sbjct: 359 YITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLL 418
Query: 457 ESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWD 516
M +P+ W LL ACR+ N+ L E ++ ++P ++G Y LLSNIYA + +WD
Sbjct: 419 NEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWD 478
Query: 517 DVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEG 576
V +R M++RGI+ PG S +++ ++H F +GD+SHPQ+ E+ L +++ +L G
Sbjct: 479 SVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIG 538
Query: 577 YSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFK 636
Y P T+ V D+E E+ E L+ HSEK+ALAFGL+ + I KNLR+C DCH K
Sbjct: 539 YVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCK 598
Query: 637 LVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
L SK+ +I++RD +RYHHF++G CSC D+W
Sbjct: 599 LASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 107/455 (23%), Positives = 175/455 (38%), Gaps = 152/455 (33%)
Query: 53 IILKTAHFHDH----FVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIE 108
+I + +F+ H F+ L+ Y FN A ++FD +P+ NV + +
Sbjct: 82 LICRHLYFNGHRPMMFLVNVLINMYVK--FNLLNDAHQLFDQMPQRNVISWTTMISAYSK 139
Query: 109 NGEPHKAISCYHKMMVLNSRPNKFTYPTLFKAC--------AVTGSVKEGVQFHAFV--- 157
KA+ M+ N RPN +TY ++ ++C G +KEG++ FV
Sbjct: 140 CKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSA 199
Query: 158 -----------------VKQGLTGDVHIKSAGIQMYA-------SFGLFREARKM----- 188
+ +TGD + ++ I +A + LF+ ++
Sbjct: 200 LIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAE 259
Query: 189 ---------------LDESG--------KTQTDVICWNAMIDGYLKCGEVEAANEVFVNM 225
L E G K D+I NA++D Y KCG +E A VF M
Sbjct: 260 QATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQM 319
Query: 226 PDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFH 285
+++V +W+ MISGLA+ +GY +EAL++F
Sbjct: 320 KERDVITWSTMISGLAQ--------------------------NGY-----SQEALKLFE 348
Query: 286 QMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCG 345
+M+ KP+ + +L C++ G L+ G
Sbjct: 349 RMKSSGTKPNYITIVGVLFACSHAGLLEDG------------------------------ 378
Query: 346 RLDMAWEVFEKMK-------VREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGV 398
W F MK VRE + MI L G+ +DA+KL +M E P+ V
Sbjct: 379 -----WYYFRSMKKLYGIDPVRE--HYGCMIDLLGKAGKLDDAVKLLNEMECE---PDAV 428
Query: 399 TFVGVLNACAHAGMVERGLGLFN-SMKRVYEIEPE 432
T+ +L AC V+R + L + K+V ++PE
Sbjct: 429 TWRTLLGACR----VQRNMVLAEYAAKKVIALDPE 459
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 119/289 (41%), Gaps = 31/289 (10%)
Query: 274 QRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVL 333
QR A++ +Q + ++ C + ++ +G I + N + L
Sbjct: 39 QRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFL 98
Query: 334 GTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKR 393
LI+MYVK L+ A ++F++M R V +W MI + + A++L M +
Sbjct: 99 VNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNV 158
Query: 394 KPNGVTFVGVLNAC--------AHAGMVERGL--------GLFNSMKRVYEIEPEMEHFG 437
+PN T+ VL +C H G+++ GL L + ++ E E + F
Sbjct: 159 RPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFD 218
Query: 438 CVV--------DLLG------RAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVEL 483
+V ++G R+ + E K ++ A ++L AC +EL
Sbjct: 219 EMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLEL 278
Query: 484 GERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIET 532
G + ++ + AL+ ++Y K G +D RV MKER + T
Sbjct: 279 GMQAHVHIVKYDQDLILNNALV-DMYCKCGSLEDALRVFNQMKERDVIT 326
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 402 bits (1032), Expect = e-112, Method: Compositional matrix adjust.
Identities = 193/486 (39%), Positives = 299/486 (61%), Gaps = 4/486 (0%)
Query: 43 SLQHLKQAHAIILKTAHFHDHFVSGTLLKCYA-NPNFNNFTLATKVFDCIPRPNVFVCNI 101
SL ++QAHA +LKT FHD F + L+ A NP + A + + I PN F N
Sbjct: 51 SLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNS 110
Query: 102 YLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQG 161
++ + P A++ + +M++ P+K+++ + KACA +EG Q H +K G
Sbjct: 111 VIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSG 170
Query: 162 LTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEV 221
L DV +++ + +Y G F ARK+LD D + WN+++ YL+ G V+ A +
Sbjct: 171 LVTDVFVENTLVNVYGRSGYFEIARKVLDR--MPVRDAVSWNSLLSAYLEKGLVDEARAL 228
Query: 222 FVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEAL 281
F M ++NV SWN MISG A G+++ A+ +FD M RD +SW+A++ Y C+ E L
Sbjct: 229 FDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVL 288
Query: 282 EVFHQMQREKI-KPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDM 340
EVF++M + KP L S+L+ CA++GSL QG W+H +++++ I+++ L TAL+DM
Sbjct: 289 EVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDM 348
Query: 341 YVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTF 400
Y KCG++D A EVF R+VSTWN++I L++HG +DA+++F++M E KPNG+TF
Sbjct: 349 YSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITF 408
Query: 401 VGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMP 460
+GVL+AC H GM+++ LF M VY +EP +EH+GC+VDLLGR G +EEAE+ + +P
Sbjct: 409 IGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIP 468
Query: 461 VKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVAR 520
+ +LL AC+ G +E ER+ LL++ R+S YA +SN+YA GRW+ V
Sbjct: 469 ADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVID 528
Query: 521 VRKLMK 526
R+ M+
Sbjct: 529 GRRNMR 534
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 401 bits (1030), Expect = e-111, Method: Compositional matrix adjust.
Identities = 187/443 (42%), Positives = 292/443 (65%), Gaps = 1/443 (0%)
Query: 227 DKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQ 286
D NV +I+ C +++AR +FD + E + ++A+I GY ++ EAL +F +
Sbjct: 161 DDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFRE 220
Query: 287 MQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGR 346
MQ + +KP+ L S+L+ CA +GSLD G+WIH + +++S + TALIDM+ KCG
Sbjct: 221 MQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGS 280
Query: 347 LDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNA 406
LD A +FEKM+ ++ W+AMI A HG+AE +M +F +M E +P+ +TF+G+LNA
Sbjct: 281 LDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNA 340
Query: 407 CAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVA 466
C+H G VE G F+ M + I P ++H+G +VDLL RAG +E+A +FI+ +P+ P
Sbjct: 341 CSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPM 400
Query: 467 VWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMK 526
+W LL AC H N++L E+V + +++ + G Y +LSN+YA+ +W+ V +RK+MK
Sbjct: 401 LWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMK 460
Query: 527 ERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSY 586
+R VPG S +++ VHEF GD +++ L++M+ +L++ GY P+TSMV +
Sbjct: 461 DRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVH 520
Query: 587 -DIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFKLVSKIYGHN 645
++ ++EKE L+ HSEK+A+ FGLL+ PGTT+ +VKNLRVC DCH+A KL+S I+G
Sbjct: 521 ANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRK 580
Query: 646 IIMRDRVRYHHFKNGMCSCKDFW 668
+++RD R+HHF++G CSC DFW
Sbjct: 581 VVLRDVQRFHHFEDGKCSCGDFW 603
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 180/392 (45%), Gaps = 46/392 (11%)
Query: 35 ILNKKCFHSLQHLKQAHAIILKTAHFHD-HFVSGTLLKCYANPNFNNFTLATKVFDCIPR 93
+L KC +SL+ L Q A +K+ H D FV+ + C +P ++ + A +F+ +
Sbjct: 34 LLISKC-NSLRELMQIQAYAIKS-HIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSE 91
Query: 94 PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQF 153
P++ + N +G P + S + +++ P+ +T+P+L KACAV +++EG Q
Sbjct: 92 PDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQL 151
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCG 213
H +K GL +V++ I MY AR + D + V+C+NAMI GY +
Sbjct: 152 HCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRI--VEPCVVCYNAMITGYARRN 209
Query: 214 EVEAANEVFVNMPDK----------------------NVGSW-----------------N 234
A +F M K ++G W
Sbjct: 210 RPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNT 269
Query: 235 AMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKP 294
A+I A+CG +++A ++F++M +D +WSA+I Y ++++ +F +M+ E ++P
Sbjct: 270 ALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQP 329
Query: 295 SRHLLPSMLTVCANVGSLDQGR-WIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEV 353
+L C++ G +++GR + V + I +++D+ + G L+ A+E
Sbjct: 330 DEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEF 389
Query: 354 FEKMKVREVST-WNAMIGGLAIHGRAEDAMKL 384
+K+ + W ++ + H + A K+
Sbjct: 390 IDKLPISPTPMLWRILLAACSSHNNLDLAEKV 421
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 120/234 (51%), Gaps = 2/234 (0%)
Query: 249 ARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCAN 308
AR LF+ M E D + ++++ GY + E +F ++ + I P + PS+L CA
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 309 VGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAM 368
+L++GR +H + + + + LI+MY +C +D A VF+++ V +NAM
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201
Query: 369 IGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYE 428
I G A R +A+ LF +M G+ KPN +T + VL++CA G ++ G + K+ +
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKK-HS 260
Query: 429 IEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVE 482
++ ++D+ + G +++A E M K A W A++ A HG E
Sbjct: 261 FCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQA-WSAMIVAYANHGKAE 313
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 400 bits (1029), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/661 (32%), Positives = 346/661 (52%), Gaps = 45/661 (6%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSI 107
+Q HA K ++ + G LL YA + A F NV + N+ L
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKCA--DIETALDYFLETEVENVVLWNVMLVAYG 466
Query: 108 ENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVH 167
+ + + +M + PN++TYP++ K C G ++ G Q H+ ++K + +
Sbjct: 467 LLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAY 526
Query: 168 IKSAGIQMYASFGLFREARKMLDE-SGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMP 226
+ S I MYA G A +L +GK DV+ W MI GY + + A F M
Sbjct: 527 VCSVLIDMYAKLGKLDTAWDILIRFAGK---DVVSWTTMIAGYTQYNFDDKALTTFRQML 583
Query: 227 DKNVGS---------------------------------------WNAMISGLARCGMIE 247
D+ + S NA+++ +RCG IE
Sbjct: 584 DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIE 643
Query: 248 NARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCA 307
+ F++ D I+W+A++ G+ + +EAL VF +M RE I + S + +
Sbjct: 644 ESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAAS 703
Query: 308 NVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNA 367
++ QG+ +H+ + + + + ALI MY KCG + A + F ++ + +WNA
Sbjct: 704 ETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNA 763
Query: 368 MIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVY 427
+I + HG +A+ F +M +PN VT VGVL+AC+H G+V++G+ F SM Y
Sbjct: 764 IINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEY 823
Query: 428 EIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERV 487
+ P+ EH+ CVVD+L RAGL+ A++FI+ MP+KP+ VW LL+AC +H N+E+GE
Sbjct: 824 GLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFA 883
Query: 488 GWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHE 547
LL++EP +S Y LLSN+YA + +WD R+ MKE+G++ PG S +++ +H
Sbjct: 884 AHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHS 943
Query: 548 FKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQHSEKIALA 607
F +GD +HP EI+ + + + GY + + +++ E+K+ ++ HSEK+A++
Sbjct: 944 FYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAIS 1003
Query: 608 FGLLHAKPGTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDF 667
FGLL ++++KNLRVC DCH+ K VSK+ II+RD R+HHF+ G CSCKD+
Sbjct: 1004 FGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDY 1063
Query: 668 W 668
W
Sbjct: 1064 W 1064
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/505 (25%), Positives = 225/505 (44%), Gaps = 46/505 (9%)
Query: 47 LKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGS 106
++Q HA IL V L+ Y+ F + LA +VFD + + + G
Sbjct: 206 VEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVD--LARRVFDGLRLKDHSSWVAMISGL 263
Query: 107 IENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDV 166
+N +AI + M VL P + + ++ AC S++ G Q H V+K G + D
Sbjct: 264 SKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDT 323
Query: 167 HIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM- 225
++ +A + +Y G A + S +Q D + +N +I+G +CG E A E+F M
Sbjct: 324 YVCNALVSLYFHLGNLISAEHIF--SNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMH 381
Query: 226 -----PDKNV-----------------------------GSWN----AMISGLARCGMIE 247
PD N S N A+++ A+C IE
Sbjct: 382 LDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIE 441
Query: 248 NARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCA 307
A F E + + W+ ++ Y + + +F QMQ E+I P+++ PS+L C
Sbjct: 442 TALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCI 501
Query: 308 NVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNA 367
+G L+ G IHS + + + Q++A + + LIDMY K G+LD AW++ + ++V +W
Sbjct: 502 RLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTT 561
Query: 368 MIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVY 427
MI G + + A+ F +M + + V ++ACA ++ G + ++ V
Sbjct: 562 MIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI-HAQACVS 620
Query: 428 EIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERV 487
++ +V L R G +EE+ E N+A W AL++ + GN E RV
Sbjct: 621 GFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIA-WNALVSGFQQSGNNEEALRV 679
Query: 488 GWILLDMEPRNSGRYALLSNIYAKA 512
++ ++ E ++ + S + A +
Sbjct: 680 -FVRMNREGIDNNNFTFGSAVKAAS 703
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 122/487 (25%), Positives = 207/487 (42%), Gaps = 79/487 (16%)
Query: 128 RPNKFTYPTLFKACAVT-GSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREAR 186
RPN T L + C T GS+ EG + H+ ++K GL + + Y G A
Sbjct: 81 RPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAF 140
Query: 187 KMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNV----GSW--------- 233
K+ DE + + WN MI + +FV M +NV G++
Sbjct: 141 KVFDE--MPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 234 ---------------------------NAMISGLARCGMIENARTLFDEMGERDEISWSA 266
N +I +R G ++ AR +FD + +D SW A
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258
Query: 267 IIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNS 326
+I G K C EA+ +F M I P+ + S+L+ C + SL+ G +H V +
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 318
Query: 327 IQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFT 386
D + AL+ +Y G L A +F M R+ T+N +I GL+ G E AM+LF
Sbjct: 319 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK 378
Query: 387 KMNGEKRKPNGVTFVGVLNACAHAGMVERGLGL--------FNSMKRV------------ 426
+M+ + +P+ T ++ AC+ G + RG L F S ++
Sbjct: 379 RMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCA 438
Query: 427 -------YEIEPEMEHFGCVVDLLGRAGLVEEAE---KFIESMPVK---PNVAVWGALLN 473
Y +E E+E+ +L GL+++ + M ++ PN + ++L
Sbjct: 439 DIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILK 498
Query: 474 ACRIHGNVELGERV-GWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIET 532
C G++ELGE++ I+ N+ ++L ++YAK G+ D + L++ G +
Sbjct: 499 TCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI--LIRFAGKDV 556
Query: 533 VPGSSMM 539
V ++M+
Sbjct: 557 VSWTTMI 563
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 125/281 (44%), Gaps = 37/281 (13%)
Query: 249 ARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCAN 308
RT+F + S++AI + F+E + ++ I+P+ L +L C
Sbjct: 39 TRTVFPTLCGTRRASFAAISVYISEDESFQE--KRIDSVENRGIRPNHQTLKWLLEGCLK 96
Query: 309 V-GSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNA 367
GSLD+GR +HS + + + + L L D Y+ G L A++VF++M R + TWN
Sbjct: 97 TNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNK 156
Query: 368 MIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNAC------------AHAGMVER 415
MI LA + LF +M E PN TF GVL AC HA ++ +
Sbjct: 157 MIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQ 216
Query: 416 GL-----------------GLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKF--- 455
GL G + +RV++ +H V + G + EAE
Sbjct: 217 GLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLF 276
Query: 456 --IESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDM 494
+ + + P + ++L+AC+ ++E+GE++ ++L +
Sbjct: 277 CDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 317
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 400 bits (1027), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/593 (35%), Positives = 331/593 (55%), Gaps = 47/593 (7%)
Query: 121 KMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFG 180
+++ S P++ TY L C S+ + ++ H ++ G D + + I MY+ G
Sbjct: 67 RVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLG 126
Query: 181 LFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVE------------------------ 216
ARK+ D++ K + WNA+ G E
Sbjct: 127 SVDYARKVFDKTRKRT--IYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYV 184
Query: 217 ----AANEVFVN--MPDKNVGS-------------WNAMISGLARCGMIENARTLFDEMG 257
A+E VN M K + + ++ AR G ++ A +F M
Sbjct: 185 LKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMP 244
Query: 258 ERDEISWSAIIDGYIKQRCFKEALEVFHQMQREK--IKPSRHLLPSMLTVCANVGSLDQG 315
R+ +SWSA+I Y K EAL F +M RE P+ + S+L CA++ +L+QG
Sbjct: 245 VRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQG 304
Query: 316 RWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIH 375
+ IH ++ R + + +AL+ MY +CG+L++ VF++M R+V +WN++I +H
Sbjct: 305 KLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVH 364
Query: 376 GRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEH 435
G + A+++F +M P VTFV VL AC+H G+VE G LF +M R + I+P++EH
Sbjct: 365 GYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEH 424
Query: 436 FGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDME 495
+ C+VDLLGRA ++EA K ++ M +P VWG+LL +CRIHGNVEL ER L +E
Sbjct: 425 YACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALE 484
Query: 496 PRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSH 555
P+N+G Y LL++IYA+A WD+V RV+KL++ RG++ +PG M++ K++ F D +
Sbjct: 485 PKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFN 544
Query: 556 PQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKP 615
P M++I+ L K+ + ++ +GY P T V Y++E EEKE ++ HSEK+ALAFGL++
Sbjct: 545 PLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSK 604
Query: 616 GTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
G + I KNLR+C DCH K +SK I++RD R+H FKNG+CSC D+W
Sbjct: 605 GEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 109/470 (23%), Positives = 201/470 (42%), Gaps = 69/470 (14%)
Query: 17 LSSDQAPSSKLSQKTVLDILNKKCFH--SLQHLKQAHAIILKTAHFHDHFVSGTLLKCYA 74
LS + +PS + + +L C H SL + H IL D F++ L+ Y+
Sbjct: 69 LSQESSPSQQTYELLIL-----CCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYS 123
Query: 75 NPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTY 134
+ + A KVFD + ++V N + G + + Y KM + ++FTY
Sbjct: 124 D--LGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTY 181
Query: 135 PTLFKACAVT----GSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLD 190
+ KAC + + +G + HA + ++G + V+I + + MYA FG A +
Sbjct: 182 TYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVF- 240
Query: 191 ESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM------------------------- 225
G +V+ W+AMI Y K G+ A F M
Sbjct: 241 -GGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLA 299
Query: 226 ----------------PDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIID 269
D + +A+++ RCG +E + +FD M +RD +SW+++I
Sbjct: 300 ALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLIS 359
Query: 270 GYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERN-SIQ 328
Y K+A+++F +M P+ S+L C++ G +++G+ + + R+ I+
Sbjct: 360 SYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIK 419
Query: 329 VDAVLGTALIDMYVKCGRLDMAWEVFEKMKVRE-VSTWNAMIGGLAIHGRAEDAMKLFTK 387
++D+ + RLD A ++ + M+ W +++G IHG E A + +
Sbjct: 420 PQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRR 479
Query: 388 MNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFG 437
+ + K N +V + + A A M ++ +KRV ++ +EH G
Sbjct: 480 LFALEPK-NAGNYVLLADIYAEAQM-------WDEVKRVKKL---LEHRG 518
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 100/228 (43%), Gaps = 21/228 (9%)
Query: 257 GERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGR 316
G +IS + +I K+ K+A+ V Q + PS+ ++ C + SL
Sbjct: 42 GAGAKISNNQLIQSLCKEGKLKQAIRVLSQ----ESSPSQQTYELLILCCGHRSSLSDAL 97
Query: 317 WIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHG 376
+H + N D L T LI MY G +D A +VF+K + R + WNA+ L + G
Sbjct: 98 RVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAG 157
Query: 377 RAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHF 436
E+ + L+ KMN + + T+ VL AC + N + + EI +
Sbjct: 158 HGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT------VNHLMKGKEIHAHLTRR 211
Query: 437 G---------CVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNAC 475
G +VD+ R G V+ A MPV+ NV W A++ AC
Sbjct: 212 GYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVR-NVVSWSAMI-AC 257
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 398 bits (1023), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/566 (36%), Positives = 329/566 (58%), Gaps = 42/566 (7%)
Query: 134 YPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESG 193
Y TL K C V + +G HA +++ D+ + + + MYA G EARK+ ++
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEK-- 120
Query: 194 KTQTDVICWNAMIDGYLK----CGEVEAANEV--FVNMP--------------------- 226
Q D + W +I GY + C + N++ F P
Sbjct: 121 MPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCG 180
Query: 227 ------------DKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQ 274
D NV +A++ R G++++A+ +FD + R+++SW+A+I G+ ++
Sbjct: 181 HQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARR 240
Query: 275 RCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLG 334
++ALE+F M R+ +PS S+ C++ G L+QG+W+H+++ ++ ++ A G
Sbjct: 241 SGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG 300
Query: 335 TALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRK 394
L+DMY K G + A ++F+++ R+V +WN+++ A HG ++A+ F +M +
Sbjct: 301 NTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIR 360
Query: 395 PNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEK 454
PN ++F+ VL AC+H+G+++ G + MK+ I PE H+ VVDLLGRAG + A +
Sbjct: 361 PNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALR 419
Query: 455 FIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGR 514
FIE MP++P A+W ALLNACR+H N ELG + +++P + G + +L NIYA GR
Sbjct: 420 FIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGR 479
Query: 515 WDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQI 574
W+D ARVRK MKE G++ P S +++ +H F D HPQ +EI E+++ K++
Sbjct: 480 WNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKE 539
Query: 575 EGYSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSA 634
GY P+TS V ++++E+E L+ HSEKIALAF LL+ PG+T+HI KN+RVC DCH+A
Sbjct: 540 LGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTA 599
Query: 635 FKLVSKIYGHNIIMRDRVRYHHFKNG 660
KL SK+ G II+RD R+HHFK+
Sbjct: 600 IKLASKVVGREIIVRDTNRFHHFKDA 625
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 191/415 (46%), Gaps = 47/415 (11%)
Query: 8 FPSGLKPIELSSDQAPSSKL-SQKTVLDILNKKC--FHSLQHLKQAHAIILKTAHFHDHF 64
FPS + SS+ S + + + + L KKC F L + HA IL++ HD
Sbjct: 37 FPSNDLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIV 96
Query: 65 VSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMV 124
+ TLL YA + A KVF+ +P+ + + G ++ P A+ +++M+
Sbjct: 97 MGNTLLNMYAK--CGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLR 154
Query: 125 LNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFRE 184
PN+FT ++ KA A G Q H F VK G +VH+ SA + +Y +GL +
Sbjct: 155 FGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDD 214
Query: 185 ARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNV-------------- 230
A+ + D + +++ DV WNA+I G+ + E A E+F M
Sbjct: 215 AQLVFD-ALESRNDV-SWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGAC 272
Query: 231 --------GSW-----------------NAMISGLARCGMIENARTLFDEMGERDEISWS 265
G W N ++ A+ G I +AR +FD + +RD +SW+
Sbjct: 273 SSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWN 332
Query: 266 AIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERN 325
+++ Y + KEA+ F +M+R I+P+ S+LT C++ G LD+G + ++++
Sbjct: 333 SLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD 392
Query: 326 SIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVST-WNAMIGGLAIHGRAE 379
I +A ++D+ + G L+ A E+M + + W A++ +H E
Sbjct: 393 GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTE 447
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 123/273 (45%), Gaps = 30/273 (10%)
Query: 292 IKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAW 351
I R ++L C L QGR +H+ + ++ + D V+G L++MY KCG L+ A
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 352 EVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACA--- 408
+VFEKM R+ TW +I G + H R DA+ F +M PN T V+ A A
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAER 175
Query: 409 --------HAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMP 460
H V+ G F+S V ++DL R GL+++A+ +++
Sbjct: 176 RGCCGHQLHGFCVKCG---FDSNVHV---------GSALLDLYTRYGLMDDAQLVFDALE 223
Query: 461 VKPNVAVWGALLNA-CRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVA 519
+ +V+ W AL+ R G + E +L D + YA L + G +
Sbjct: 224 SRNDVS-WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGK 282
Query: 520 RVRKLMKERGIETV--PGSSMMDM---GGKVHE 547
V M + G + V G++++DM G +H+
Sbjct: 283 WVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHD 315
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 398 bits (1022), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/533 (37%), Positives = 310/533 (58%), Gaps = 35/533 (6%)
Query: 137 LFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQ 196
+ ++C + K +Q HA + K G + + + Y AR++L
Sbjct: 36 VLESCKAPSNSKCVLQAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFLSLS 95
Query: 197 TDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEM 256
V N +I+ +K GE A +V N D+NV +WN M
Sbjct: 96 PGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLM-------------------- 135
Query: 257 GERDEISWSAIIDGYIKQRCFKEALEVFHQMQR-EKIKPSRHLLPSMLTVCANVGSLDQG 315
I GY++ ++EAL+ M IKP++ S L CA +G L
Sbjct: 136 -----------IGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHA 184
Query: 316 RWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIH 375
+W+HS + + I+++A+L +AL+D+Y KCG + + EVF +K +VS WNAMI G A H
Sbjct: 185 KWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATH 244
Query: 376 GRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEH 435
G A +A+++F++M E P+ +TF+G+L C+H G++E G F M R + I+P++EH
Sbjct: 245 GLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEH 304
Query: 436 FGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDME 495
+G +VDLLGRAG V+EA + IESMP++P+V +W +LL++ R + N ELGE + ++
Sbjct: 305 YGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIA---IQNLS 361
Query: 496 PRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSH 555
SG Y LLSNIY+ +W+ +VR+LM + GI G S ++ GG +H FK GD+SH
Sbjct: 362 KAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSH 421
Query: 556 PQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKP 615
+ K IY +LE ++ K + +G+ +T +V D+ EEEKE L HSEK+ALA+ +L + P
Sbjct: 422 IETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSSP 481
Query: 616 GTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
GT + I KN+R+C+DCH+ K VSK+ IIMRDR+R+H F++G+CSC+D+W
Sbjct: 482 GTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGLCSCRDYW 534
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 104/232 (44%), Gaps = 15/232 (6%)
Query: 83 LATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNS-RPNKFTYPTLFKAC 141
LA KV NV N+ + G + N + +A+ M+ +PNKF++ + AC
Sbjct: 116 LAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAAC 175
Query: 142 AVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVIC 201
A G + H+ ++ G+ + + SA + +YA G +R++ + DV
Sbjct: 176 ARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVF--YSVKRNDVSI 233
Query: 202 WNAMIDGYLKCGEVEAANEVFVNMPDKNVG----SWNAMISGLARCGMIENARTLFDEMG 257
WNAMI G+ G A VF M ++V ++ +++ + CG++E + F M
Sbjct: 234 WNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMS 293
Query: 258 ERDEIS-----WSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLT 304
R I + A++D + KEA E+ M I+P + S+L+
Sbjct: 294 RRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESM---PIEPDVVIWRSLLS 342
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 395 bits (1016), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/582 (33%), Positives = 327/582 (56%), Gaps = 41/582 (7%)
Query: 126 NSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREA 185
N N+ + + CA G+V E H +++ L GDV + + I Y+ G A
Sbjct: 56 NEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELA 115
Query: 186 RKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMP------------------- 226
R++ D G + ++ WN MI Y + A ++F+ M
Sbjct: 116 RQVFD--GMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACG 173
Query: 227 --------------------DKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSA 266
D N+ A++ A+CGMI++A +F+ M ++ ++WS+
Sbjct: 174 VNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSS 233
Query: 267 IIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNS 326
++ GY++ + ++EAL ++ + QR ++ ++ L S++ C+N+ +L +G+ +H+ + ++
Sbjct: 234 MVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSG 293
Query: 327 IQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFT 386
+ + ++ +DMY KCG L ++ +F +++ + + WN +I G A H R ++ M LF
Sbjct: 294 FGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFE 353
Query: 387 KMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRA 446
KM + PN VTF +L+ C H G+VE G F M+ Y + P + H+ C+VD+LGRA
Sbjct: 354 KMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRA 413
Query: 447 GLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLS 506
GL+ EA + I+S+P P ++WG+LL +CR++ N+EL E L ++EP N+G + LLS
Sbjct: 414 GLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLS 473
Query: 507 NIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLE 566
NIYA +W+++A+ RKL+++ ++ V G S +D+ KVH F +G+S HP+++EI L+
Sbjct: 474 NIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLD 533
Query: 567 KMMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLR 626
++ K + GY P+ +D+E +KE +L QHSEK+AL FGL+ + + I+KNLR
Sbjct: 534 NLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLR 593
Query: 627 VCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
+C DCH K S II+RD R+HHF +G CSC DFW
Sbjct: 594 ICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/375 (20%), Positives = 162/375 (43%), Gaps = 45/375 (12%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSI 107
K H I++ D + L+ Y+ F LA +VFD + ++ N +
Sbjct: 81 KACHGKIIRIDLEGDVTLLNVLINAYSKCGF--VELARQVFDGMLERSLVSWNTMIGLYT 138
Query: 108 ENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVH 167
N +A+ + +M + ++FT ++ AC V E + H VK + +++
Sbjct: 139 RNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLY 198
Query: 168 IKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAA--------- 218
+ +A + +YA G+ ++A ++ ES + ++ V W++M+ GY++ E A
Sbjct: 199 VGTALLDLYAKCGMIKDAVQVF-ESMQDKSSVT-WSSMVAGYVQNKNYEEALLLYRRAQR 256
Query: 219 -----NEVFVNMPDKNVGSWNAMISG-------------------------LARCGMIEN 248
N+ ++ + A+I G A+CG +
Sbjct: 257 MSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRE 316
Query: 249 ARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCAN 308
+ +F E+ E++ W+ II G+ K KE + +F +MQ++ + P+ S+L+VC +
Sbjct: 317 SYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGH 376
Query: 309 VGSLDQGRWIHSFVERN-SIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR-EVSTWN 366
G +++GR + + + V + ++D+ + G L A+E+ + + S W
Sbjct: 377 TGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWG 436
Query: 367 AMIGGLAIHGRAEDA 381
+++ ++ E A
Sbjct: 437 SLLASCRVYKNLELA 451
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 281 LEVFHQMQREKIKPSRH--------LLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAV 332
+ V +E++ P R+ L+ +L +CA G++ + + H + R ++ D
Sbjct: 38 ISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVT 97
Query: 333 LGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEK 392
L LI+ Y KCG +++A +VF+ M R + +WN MIG + +A+ +F +M E
Sbjct: 98 LLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEG 157
Query: 393 RKPNGVTFVGVLNACA-HAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEE 451
K + T VL+AC + +E S+K I+ + ++DL + G++++
Sbjct: 158 FKFSEFTISSVLSACGVNCDALECKKLHCLSVKTC--IDLNLYVGTALLDLYAKCGMIKD 215
Query: 452 AEKFIESMPVKPNVAVWGALL 472
A + ESM K +V W +++
Sbjct: 216 AVQVFESMQDKSSVT-WSSMV 235
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 390 bits (1001), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/671 (32%), Positives = 366/671 (54%), Gaps = 59/671 (8%)
Query: 49 QAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIE 108
Q H +LK+ + S L+ Y +A KVFD +P NV + + G +
Sbjct: 27 QVHCYLLKSGSGLNLITSNYLIDMYCKCR--EPLMAYKVFDSMPERNVVSWSALMSGHVL 84
Query: 109 NGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHI 168
NG+ ++S + +M PN+FT+ T KAC + ++++G+Q H F +K G V +
Sbjct: 85 NGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEV 144
Query: 169 KSAGIQMYASFGLFREA----RKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVN 224
++ + MY+ G EA R+++D S +I WNAMI G++ G A + F
Sbjct: 145 GNSLVDMYSKCGRINEAEKVFRRIVDRS------LISWNAMIAGFVHAGYGSKALDTFGM 198
Query: 225 MPDKNVGSW--------------------------------------NAMISG-----LA 241
M + N+ +A I+G
Sbjct: 199 MQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYV 258
Query: 242 RCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPS 301
+CG + +AR FD++ E+ ISWS++I GY ++ F EA+ +F ++Q + L S
Sbjct: 259 KCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSS 318
Query: 302 MLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVRE 361
++ V A+ L QG+ + + + ++ + +++DMY+KCG +D A + F +M++++
Sbjct: 319 IIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKD 378
Query: 362 VSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFN 421
V +W +I G HG + ++++F +M +P+ V ++ VL+AC+H+GM++ G LF+
Sbjct: 379 VISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFS 438
Query: 422 SMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNV 481
+ + I+P +EH+ CVVDLLGRAG ++EA+ I++MP+KPNV +W LL+ CR+HG++
Sbjct: 439 KLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDI 498
Query: 482 ELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDM 541
ELG+ VG ILL ++ +N Y ++SN+Y +AG W++ R+L +G++ G S +++
Sbjct: 499 ELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEI 558
Query: 542 GGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIE-GYSPNTSMVSYDIEEEEKETVLKQH 600
+VH F+ G+ SHP I L++ +L+ E GY +DI++E KE L+ H
Sbjct: 559 EREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAH 618
Query: 601 SEKIALAFGLLHA---KPGTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHF 657
SEK+A+ L + G T+ + KNLRVC DCH K +SKI ++RD VR+H F
Sbjct: 619 SEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSF 678
Query: 658 KNGMCSCKDFW 668
++G CSC D+W
Sbjct: 679 EDGCCSCGDYW 689
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 194/432 (44%), Gaps = 58/432 (13%)
Query: 123 MVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLF 182
M+ N R N ++ + C G +G Q H +++K G ++ + I MY
Sbjct: 1 MIPNQRQN---LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREP 57
Query: 183 REARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNV------------ 230
A K+ D + +V+ W+A++ G++ G+++ + +F M + +
Sbjct: 58 LMAYKVFDS--MPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLK 115
Query: 231 --GSWNAMISGL-------------------------ARCGMIENARTLFDEMGERDEIS 263
G NA+ GL ++CG I A +F + +R IS
Sbjct: 116 ACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLIS 175
Query: 264 WSAIIDGYIKQRCFKEALEVFHQMQREKIK--PSRHLLPSMLTVCANVGSLDQGRWIHSF 321
W+A+I G++ +AL+ F MQ IK P L S+L C++ G + G+ IH F
Sbjct: 176 WNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGF 235
Query: 322 VERNSIQV--DAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAE 379
+ R+ A + +L+D+YVKCG L A + F+++K + + +W+++I G A G
Sbjct: 236 LVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFV 295
Query: 380 DAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEP---EMEHF 436
+AM LF ++ + + ++ A ++ +G M+ + P E
Sbjct: 296 EAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQG----KQMQALAVKLPSGLETSVL 351
Query: 437 GCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILL--DM 494
VVD+ + GLV+EAEK M +K +V W ++ HG + R+ + +L ++
Sbjct: 352 NSVVDMYLKCGLVDEAEKCFAEMQLK-DVISWTVVITGYGKHGLGKKSVRIFYEMLRHNI 410
Query: 495 EPRNSGRYALLS 506
EP A+LS
Sbjct: 411 EPDEVCYLAVLS 422
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 390 bits (1001), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/587 (35%), Positives = 339/587 (57%), Gaps = 42/587 (7%)
Query: 21 QAPSSKLSQKTVLDILNK--KCFHSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNF 78
+APS S++ + L KC +L +KQ HA I++ D ++ L+ +
Sbjct: 8 RAPSWVSSRRIFEERLQDLPKC-ANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQ 66
Query: 79 NNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLF 138
N LA +VF+ + PNV +CN ++ +N +P++A + +M + FTYP L
Sbjct: 67 TN--LAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLL 124
Query: 139 KACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFG---------LF------- 182
KAC+ + H + K GL+ D+++ +A I Y+ G LF
Sbjct: 125 KACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERD 184
Query: 183 -----------------REARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM 225
R+AR++ DE Q D+I WN M+DGY +C E+ A E+F M
Sbjct: 185 TVSWNSMLGGLVKAGELRDARRLFDE--MPQRDLISWNTMLDGYARCREMSKAFELFEKM 242
Query: 226 PDKNVGSWNAMISGLARCGMIENARTLFDEMG--ERDEISWSAIIDGYIKQRCFKEALEV 283
P++N SW+ M+ G ++ G +E AR +FD+M ++ ++W+ II GY ++ KEA +
Sbjct: 243 PERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRL 302
Query: 284 FHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVK 343
QM +K + S+L C G L G IHS ++R+++ +A + AL+DMY K
Sbjct: 303 VDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAK 362
Query: 344 CGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGV 403
CG L A++VF + +++ +WN M+ GL +HG ++A++LF++M E +P+ VTF+ V
Sbjct: 363 CGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAV 422
Query: 404 LNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKP 463
L +C HAG+++ G+ F SM++VY++ P++EH+GC+VDLLGR G ++EA K +++MP++P
Sbjct: 423 LCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEP 482
Query: 464 NVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRK 523
NV +WGALL ACR+H V++ + V L+ ++P + G Y+LLSNIYA A W+ VA +R
Sbjct: 483 NVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRS 542
Query: 524 LMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMD 570
MK G+E G+S +++ +HEF + D SHP+ +IY ML +++
Sbjct: 543 KMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLIE 589
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 389 bits (1000), Expect = e-108, Method: Compositional matrix adjust.
Identities = 223/659 (33%), Positives = 355/659 (53%), Gaps = 48/659 (7%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSI 107
K+ H +++ + D V L+ Y + A +FD +PR ++ N + G
Sbjct: 216 KEVHVHVVRYGYELDIDVVNALITMYVKCG--DVKSARLLFDRMPRRDIISWNAMISGYF 273
Query: 108 ENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVH 167
ENG H+ + + M L+ P+ T ++ AC + G + G HA+V+ G D+
Sbjct: 274 ENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDIS 333
Query: 168 IKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGY------------------ 209
+ ++ QMY + G +REA K+ S + D++ W MI GY
Sbjct: 334 VCNSLTQMYLNAGSWREAEKLF--SRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQ 391
Query: 210 --LKCGEVEAAN--EVFVNMPDKNVGS-----------------WNAMISGLARCGMIEN 248
+K E+ A + D + G N +I+ ++C I+
Sbjct: 392 DSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDK 451
Query: 249 ARTLFDEMGERDEISWSAIIDGY-IKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCA 307
A +F + ++ ISW++II G + RCF EAL QM + ++P+ L + L CA
Sbjct: 452 ALDIFHNIPRKNVISWTSIIAGLRLNNRCF-EALIFLRQM-KMTLQPNAITLTAALAACA 509
Query: 308 NVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNA 367
+G+L G+ IH+ V R + +D L AL+DMYV+CGR++ AW F K ++V++WN
Sbjct: 510 RIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNI 568
Query: 368 MIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVY 427
++ G + G+ ++LF +M + +P+ +TF+ +L C+ + MV +GL F+ M+ Y
Sbjct: 569 LLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED-Y 627
Query: 428 EIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERV 487
+ P ++H+ CVVDLLGRAG ++EA KFI+ MPV P+ AVWGALLNACRIH ++LGE
Sbjct: 628 GVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELS 687
Query: 488 GWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHE 547
+ +++ ++ G Y LL N+YA G+W +VA+VR++MKE G+ G S +++ GKVH
Sbjct: 688 AQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHA 747
Query: 548 FKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQHSEKIALA 607
F D HPQ KEI +LE +K+ G + + S D E ++ + HSE+ A+A
Sbjct: 748 FLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERKAIA 807
Query: 608 FGLLHAKPGTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKD 666
FGL++ PG + + KNL +C +CH K +SK I +RD +HHFK+G CSC D
Sbjct: 808 FGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/466 (24%), Positives = 197/466 (42%), Gaps = 74/466 (15%)
Query: 78 FNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMM-VLNSRPNKFTYPT 136
F N A VF + N+F N+ + G + G +A+ YH+M+ V +P+ +T+P
Sbjct: 142 FGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPC 201
Query: 137 LFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQ 196
+ + C + G + H VV+ G D+ + +A I MY G + AR + D +
Sbjct: 202 VLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDR--MPR 259
Query: 197 TDVICWNAMIDGYLKCGEVEAANEVFVNM------PD----------------------- 227
D+I WNAMI GY + G E+F M PD
Sbjct: 260 RDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDI 319
Query: 228 ----------KNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCF 277
++ N++ G A LF M +D +SW+ +I GY
Sbjct: 320 HAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLP 379
Query: 278 KEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTAL 337
+A++ + M ++ +KP + ++L+ CA +G LD G +H + + ++ L
Sbjct: 380 DKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNL 439
Query: 338 IDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNG 397
I+MY KC +D A ++F + + V +W ++I GL ++ R +A+ +F + +PN
Sbjct: 440 INMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNA 498
Query: 398 VTF---------VGVLNACA---HAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGR 445
+T +G L C HA ++ G+GL + + ++D+ R
Sbjct: 499 ITLTAALAACARIGAL-MCGKEIHAHVLRTGVGLDDFLPNA------------LLDMYVR 545
Query: 446 AGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGN----VELGERV 487
G + A S K +V W LL G VEL +R+
Sbjct: 546 CGRMNTAWSQFNSQ--KKDVTSWNILLTGYSERGQGSMVVELFDRM 589
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 187/416 (44%), Gaps = 44/416 (10%)
Query: 103 LKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGL 162
L G NG+ +A+ + M L ++ + L + C + +EG + ++ +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 163 TGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVF 222
+ V + +A + M+ FG +A + + ++ ++ WN ++ GY K G + A ++
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGK--MSERNLFSWNVLVGGYAKQGYFDEAMCLY 183
Query: 223 VNM-------PDK---------------------------------NVGSWNAMISGLAR 242
M PD ++ NA+I+ +
Sbjct: 184 HRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVK 243
Query: 243 CGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSM 302
CG +++AR LFD M RD ISW+A+I GY + E LE+F M+ + P L S+
Sbjct: 244 CGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSV 303
Query: 303 LTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREV 362
++ C +G GR IH++V VD + +L MY+ G A ++F +M+ +++
Sbjct: 304 ISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDI 363
Query: 363 STWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNS 422
+W MI G + + A+ + M+ + KP+ +T VL+ACA G ++ G+ L
Sbjct: 364 VSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKL 423
Query: 423 MKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIH 478
+ I + ++++ + +++A ++P K NV W +++ R++
Sbjct: 424 AIKARLISYVIVA-NNLINMYSKCKCIDKALDIFHNIPRK-NVISWTSIIAGLRLN 477
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 386 bits (991), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/629 (33%), Positives = 338/629 (53%), Gaps = 71/629 (11%)
Query: 44 LQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYL 103
++ L+Q HA ++ T + + L+ + +T +F +P P+ F+ N +
Sbjct: 22 VKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYT--HLLFLSVPLPDDFLFNSVI 79
Query: 104 KGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLT 163
K + + P ++ Y +M+ N P+ +T+ T +K A + +G
Sbjct: 80 KSTSKLRLPLHCVAYYRRMLSSNVSPSNYTF---------TSVIKSCADLSALRIGKG-- 128
Query: 164 GDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFV 223
VH + + + FGL D Y++
Sbjct: 129 --VHCHA----VVSGFGL-------------------------DTYVQA----------- 146
Query: 224 NMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEV 283
A+++ ++CG +E AR +FD M E+ ++W++++ G+ + EA++V
Sbjct: 147 -----------ALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQV 195
Query: 284 FHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVK 343
F+QM+ +P S+L+ CA G++ G W+H ++ + ++ LGTALI++Y +
Sbjct: 196 FYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSR 255
Query: 344 CGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGE-KRKPNGVTFVG 402
CG + A EVF+KMK V+ W AMI HG + A++LF KM + PN VTFV
Sbjct: 256 CGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVA 315
Query: 403 VLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVK 462
VL+ACAHAG+VE G ++ M + Y + P +EH C+VD+LGRAG ++EA KFI +
Sbjct: 316 VLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDAT 375
Query: 463 PNV---AVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVA 519
A+W A+L AC++H N +LG + L+ +EP N G + +LSNIYA +G+ D+V+
Sbjct: 376 GKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVS 435
Query: 520 RVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSP 579
+R M + G S++++ K + F MGD SH + EIY LE ++ + + GY+P
Sbjct: 436 HIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAP 495
Query: 580 NTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFKLVS 639
+ V + +EEEEKE L+ HSEK+A+AFGLL + IVKNLR+C DCHSAFK +S
Sbjct: 496 VSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKT-VDVAITIVKNLRICEDCHSAFKYIS 554
Query: 640 KIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
+ I +RD++R+HHF+NG CSC D+W
Sbjct: 555 IVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 141/311 (45%), Gaps = 21/311 (6%)
Query: 17 LSSDQAPSSKLSQKTVLDILNKKC--FHSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYA 74
LSS+ +PS+ + K C +L+ K H + + D +V L+ Y+
Sbjct: 99 LSSNVSPSNYTFTSVI-----KSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYS 153
Query: 75 NPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTY 134
+ A +VFD +P ++ N + G +NG +AI +++M P+ T+
Sbjct: 154 KCG--DMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATF 211
Query: 135 PTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGK 194
+L ACA TG+V G H +++ +GL +V + +A I +Y+ G +AR++ D+
Sbjct: 212 VSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDK--M 269
Query: 195 TQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDK-----NVGSWNAMISGLARCGMIENA 249
+T+V W AMI Y G + A E+F M D N ++ A++S A G++E
Sbjct: 270 KETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEG 329
Query: 250 RTLFDEMGERDEI-----SWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLT 304
R+++ M + + ++D + EA + HQ+ + L +ML
Sbjct: 330 RSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLG 389
Query: 305 VCANVGSLDQG 315
C + D G
Sbjct: 390 ACKMHRNYDLG 400
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 385 bits (989), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/568 (36%), Positives = 322/568 (56%), Gaps = 43/568 (7%)
Query: 142 AVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVIC 201
A + K+ + HA V++ G + + + ++ G AR++ DE K + +
Sbjct: 19 ASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPR--IFL 76
Query: 202 WNAMIDGYLKCGEVEAANEVFVNMPD--------------KNVGSWNAMISGLA------ 241
WN + GY++ + ++ M D K + G A
Sbjct: 77 WNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVV 136
Query: 242 -------------------RCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALE 282
+ G + +A LF+ M +D ++W+A + ++ ALE
Sbjct: 137 KYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALE 196
Query: 283 VFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYV 342
F++M + ++ + SML+ C +GSL+ G I+ + I + ++ A +DM++
Sbjct: 197 YFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHL 256
Query: 343 KCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVG 402
KCG + A +FE+MK R V +W+ MI G A++G + +A+ LFT M E +PN VTF+G
Sbjct: 257 KCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLG 316
Query: 403 VLNACAHAGMVERGLGLFNSMKRVYE--IEPEMEHFGCVVDLLGRAGLVEEAEKFIESMP 460
VL+AC+HAG+V G F+ M + + +EP EH+ C+VDLLGR+GL+EEA +FI+ MP
Sbjct: 317 VLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMP 376
Query: 461 VKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVAR 520
V+P+ +WGALL AC +H ++ LG++V +L++ P + LLSNIYA AG+WD V +
Sbjct: 377 VEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDK 436
Query: 521 VRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPN 580
VR M++ G + V S ++ GK+H F GD SHPQ K IY L++++ K++ GY P+
Sbjct: 437 VRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPD 496
Query: 581 TSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFKLVSK 640
T V +D+E EEKE L HSEK+A+AFGL+ +PG + ++KNLR C DCH+ K VS
Sbjct: 497 TCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSS 556
Query: 641 IYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
+ IIMRD+ R+HHF+NG+CSCK+FW
Sbjct: 557 LTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 172/374 (45%), Gaps = 47/374 (12%)
Query: 45 QHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLK 104
+ LK+ HAI+L+T + + LL+ + A +VFD + +P +F+ N K
Sbjct: 25 KQLKKIHAIVLRTGFSEKNSLLTQLLENLVV--IGDMCYARQVFDEMHKPRIFLWNTLFK 82
Query: 105 GSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTG 164
G + N P +++ Y KM L RP++FTYP + KA + G G HA VVK G
Sbjct: 83 GYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGC 142
Query: 165 DVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVN 224
+ + + MY FG A + L ES + + D++ WNA + ++ G A E F
Sbjct: 143 LGIVATELVMMYMKFGELSSA-EFLFESMQVK-DLVAWNAFLAVCVQTGNSAIALEYFNK 200
Query: 225 M---------------------------------------PDKNVGSWNAMISGLARCGM 245
M D N+ NA + +CG
Sbjct: 201 MCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGN 260
Query: 246 IENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTV 305
E AR LF+EM +R+ +SWS +I GY +EAL +F MQ E ++P+ +L+
Sbjct: 261 TEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSA 320
Query: 306 CANVGSLDQG-RWIHSFVERNSIQVDAVLG--TALIDMYVKCGRLDMAWEVFEKMKVR-E 361
C++ G +++G R+ V+ N ++ ++D+ + G L+ A+E +KM V +
Sbjct: 321 CSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPD 380
Query: 362 VSTWNAMIGGLAIH 375
W A++G A+H
Sbjct: 381 TGIWGALLGACAVH 394
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 181/433 (41%), Positives = 278/433 (64%), Gaps = 5/433 (1%)
Query: 241 ARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREK---IKPSRH 297
+ C +A +FDE+ +RD +SW+ + Y++ + ++ L +F +M+ + +KP
Sbjct: 159 STCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGV 218
Query: 298 LLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKM 357
L CAN+G+LD G+ +H F++ N + L L+ MY +CG +D A++VF M
Sbjct: 219 TCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGM 278
Query: 358 KVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGL 417
+ R V +W A+I GLA++G ++A++ F +M P T G+L+AC+H+G+V G+
Sbjct: 279 RERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGM 338
Query: 418 GLFNSMKR-VYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACR 476
F+ M+ ++I+P + H+GCVVDLLGRA L+++A I+SM +KP+ +W LL ACR
Sbjct: 339 MFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACR 398
Query: 477 IHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGS 536
+HG+VELGERV L++++ +G Y LL N Y+ G+W+ V +R LMKE+ I T PG
Sbjct: 399 VHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGC 458
Query: 537 SMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIE-EEEKET 595
S +++ G VHEF + D SHP+ +EIY ML ++ +L+I GY + +++E EEEK
Sbjct: 459 SAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAEITSELHNLESEEEKGY 518
Query: 596 VLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYH 655
L+ HSEK+A+AFG+L PGTT+ + KNLR C DCH+ K VS +Y +I+RDR R+H
Sbjct: 519 ALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHNFAKFVSDVYDRIVIVRDRSRFH 578
Query: 656 HFKNGMCSCKDFW 668
HFK G CSC DFW
Sbjct: 579 HFKGGSCSCNDFW 591
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 100/431 (23%), Positives = 182/431 (42%), Gaps = 60/431 (13%)
Query: 46 HLKQAHAIILKTAH------FHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVC 99
HL+Q HA++L+T+ FH HF+S L P N++ +VF P + C
Sbjct: 26 HLRQIHALLLRTSLIRNSDVFH-HFLSRLALSLI--PRDINYS--CRVFSQRLNPTLSHC 80
Query: 100 NIYLKGSIENGEPHKAISCYHKMMVLNSRP-NKFTYPTLFKACAVTGSVKEGVQFHAFVV 158
N ++ + P + + + +S P N + K C +G + G+Q H +
Sbjct: 81 NTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIF 140
Query: 159 KQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAA 218
G D + + + +Y++ +A K+ DE K D + WN + YL+
Sbjct: 141 SDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKR--DTVSWNVLFSCYLRNKRTRDV 198
Query: 219 NEVFVNM---------PD-----------KNVGSW----------------------NAM 236
+F M PD N+G+ N +
Sbjct: 199 LVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTL 258
Query: 237 ISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSR 296
+S +RCG ++ A +F M ER+ +SW+A+I G KEA+E F++M + I P
Sbjct: 259 VSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEE 318
Query: 297 HLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLG--TALIDMYVKCGRLDMAWEVF 354
L +L+ C++ G + +G + ++ L ++D+ + LD A+ +
Sbjct: 319 QTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLI 378
Query: 355 EKMKVREVST-WNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMV 413
+ M+++ ST W ++G +HG E ++ + + K + G +V +LN + G
Sbjct: 379 KSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAG-DYVLLLNTYSTVGKW 437
Query: 414 ERGLGLFNSMK 424
E+ L + MK
Sbjct: 438 EKVTELRSLMK 448
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 279 EALEVFHQMQREKIKPSRHLLPSM-LTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTAL 337
E +F ++R P+ L S L C G L G IH + + D++L T L
Sbjct: 95 EGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTL 154
Query: 338 IDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKR---K 394
+D+Y C A +VF+++ R+ +WN + + R D + LF KM + K
Sbjct: 155 MDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVK 214
Query: 395 PNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPE------MEHFGCVVDLLGRAGL 448
P+GVT + L ACA+ G ++ G K+V++ E + +V + R G
Sbjct: 215 PDGVTCLLALQACANLGALDFG-------KQVHDFIDENGLSGALNLSNTLVSMYSRCGS 267
Query: 449 VEEAEKFIESMPVKPNVAVWGALLNACRIHG 479
+++A + M + NV W AL++ ++G
Sbjct: 268 MDKAYQVFYGMRER-NVVSWTALISGLAMNG 297
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/588 (32%), Positives = 328/588 (55%), Gaps = 12/588 (2%)
Query: 90 CIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKE 149
C +P++ N L G G AI+ +M + +P+ + +L +A A G +K
Sbjct: 184 CGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKL 243
Query: 150 GVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGY 209
G H ++++ L DV++++ I MY G AR + D +++ WN+++ G
Sbjct: 244 GKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDM--MDAKNIVAWNSLVSGL 301
Query: 210 LKCGEVEAANEVFVNMPDKNVG----SWNAMISGLARCGMIENARTLFDEMGER----DE 261
++ A + + M + + +WN++ SG A G E A + +M E+ +
Sbjct: 302 SYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNV 361
Query: 262 ISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSF 321
+SW+AI G K F+ AL+VF +MQ E + P+ + ++L + + L G+ +H F
Sbjct: 362 VSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGF 421
Query: 322 VERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDA 381
R ++ DA + TAL+DMY K G L A E+F +K + +++WN M+ G A+ GR E+
Sbjct: 422 CLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEG 481
Query: 382 MKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVD 441
+ F+ M +P+ +TF VL+ C ++G+V+ G F+ M+ Y I P +EH C+VD
Sbjct: 482 IAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVD 541
Query: 442 LLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLD-MEPRNSG 500
LLGR+G ++EA FI++M +KP+ +WGA L++C+IH ++EL E + W L +EP NS
Sbjct: 542 LLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAE-IAWKRLQVLEPHNSA 600
Query: 501 RYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKE 560
Y ++ N+Y+ RW+DV R+R LM+ + S + + VH F +HP +
Sbjct: 601 NYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGD 660
Query: 561 IYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLH 620
IY L K++ +++ GY P+TS + DI + EKE +L H+EK+A+ +GL+ K +
Sbjct: 661 IYFELYKLVSEMKKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIR 720
Query: 621 IVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
+VKN +C+D H+ K +S + I++++ R HHF++G CSC D W
Sbjct: 721 VVKNTNICSDSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 183/402 (45%), Gaps = 70/402 (17%)
Query: 83 LATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACA 142
A K+FD +P+ + N + ++ +G KA+ + +M ++ T L + C+
Sbjct: 41 FANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCS 100
Query: 143 VTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICW 202
EG Q H +V++ GL +V + ++ I MY+
Sbjct: 101 NKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYS------------------------- 135
Query: 203 NAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMG----E 258
+ G++E + +VF +M D+N+ SWN+++S + G +++A L DEM +
Sbjct: 136 --------RNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLK 187
Query: 259 RDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWI 318
D ++W++++ GY + K+A+ V +MQ +KPS + S+L A G L G+ I
Sbjct: 188 PDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAI 247
Query: 319 HSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRA 378
H ++ RN + D + T LIDMY+K G L A VF+ M + + WN+++ GL+
Sbjct: 248 HGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLL 307
Query: 379 EDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGC 438
+DA L +M E KP+ +T+ + + A G E+ L + MK
Sbjct: 308 KDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMK-------------- 353
Query: 439 VVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGN 480
EK V PNV W A+ + C +GN
Sbjct: 354 --------------EK-----GVAPNVVSWTAIFSGCSKNGN 376
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 111/207 (53%), Gaps = 1/207 (0%)
Query: 241 ARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLP 300
RC + A LFDEM +RD+++W+ I+ ++ +++A+E+F +MQ K +
Sbjct: 34 GRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMV 93
Query: 301 SMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR 360
+L VC+N +GR IH +V R ++ + + +LI MY + G+L+++ +VF MK R
Sbjct: 94 KLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDR 153
Query: 361 EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLF 420
+S+WN+++ G +DA+ L +M KP+ VT+ +L+ A G+ + + +
Sbjct: 154 NLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVL 213
Query: 421 NSMKRVYEIEPEMEHFGCVVDLLGRAG 447
M+ + ++P ++ + G
Sbjct: 214 KRMQ-IAGLKPSTSSISSLLQAVAEPG 239
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 124/284 (43%), Gaps = 21/284 (7%)
Query: 315 GRWIHS-FVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLA 373
G IH ++R D + +A + Y +C L A ++F++M R+ WN ++
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 374 IHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEM 433
G E A++LF +M K T V +L C++ G + + R+ +E +
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRL-GLESNV 124
Query: 434 EHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLD 493
++ + R G +E + K SM + N++ W ++L++ G V+ + +G LLD
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMKDR-NLSSWNSILSSYTKLGYVD--DAIG--LLD 179
Query: 494 ------MEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIE--TVPGSSMMDMGGKV 545
++P +LLS YA G D V K M+ G++ T SS++ +
Sbjct: 180 EMEICGLKPDIVTWNSLLSG-YASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEP 238
Query: 546 HEFKMGDSSHPQMKEIYLMLEKMMDKLQIE-----GYSPNTSMV 584
K+G + H + L + ++ I+ GY P MV
Sbjct: 239 GHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMV 282
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 223/651 (34%), Positives = 338/651 (51%), Gaps = 84/651 (12%)
Query: 30 KTVLDILNKKCFHSLQHLKQAHAIILKTAHFHDHFVSGTLL-KCYANPNFNNFTLATKVF 88
+ ++ + +KC S +KQ + L HF F+ LL +C +P F + + A ++F
Sbjct: 3 RVYMETMIQKCV-SFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISP-FGDLSFAVQIF 60
Query: 89 DCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNS------RPNKFTYPTLFKACA 142
IP+P N ++G + P A S Y M+ +S R + T KACA
Sbjct: 61 RYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACA 120
Query: 143 VTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICW 202
Q H + ++GL+ D +
Sbjct: 121 RALCSSAMDQLHCQINRRGLS---------------------------------ADSLLC 147
Query: 203 NAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEI 262
++D Y K G++ +A + LFDEM RD
Sbjct: 148 TTLLDAYSKNGDLISAYK-------------------------------LFDEMPVRDVA 176
Query: 263 SWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWI-HSF 321
SW+A+I G + EA+E++ +M+ E I+ S + + L C+++G + +G I H +
Sbjct: 177 SWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGY 236
Query: 322 VERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMK-VREVSTWNAMIGGLAIHGRAED 380
N ++ A IDMY KCG +D A++VFE+ + V TWN MI G A+HG A
Sbjct: 237 SNDN-----VIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHR 291
Query: 381 AMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVV 440
A+++F K+ KP+ V+++ L AC HAG+VE GL +FN+M +E M+H+GCVV
Sbjct: 292 ALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMA-CKGVERNMKHYGCVV 350
Query: 441 DLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSG 500
DLL RAG + EA I SM + P+ +W +LL A I+ +VE+ E + +M N G
Sbjct: 351 DLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDG 410
Query: 501 RYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKE 560
+ LLSN+YA GRW DV RVR M+ + ++ +PG S ++ G +HEF D SH Q +E
Sbjct: 411 DFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWRE 470
Query: 561 IYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLH---AKPGT 617
IY ++++ K++ +GY T +V +DI EEEKE L HSEK+A+A+GL+ A +
Sbjct: 471 IYEKIDEIRFKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEES 530
Query: 618 TLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
+ ++ NLR+C DCH FK +SKIY II+RDRVR+H FK+G CSC+DFW
Sbjct: 531 PVRVINNLRICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/548 (37%), Positives = 320/548 (58%), Gaps = 40/548 (7%)
Query: 23 PSS-KLSQKTVLDILNKKCFHSLQHLKQAHAIILKTAHFHDHFVSGTLLK-CYANPNFNN 80
PSS LS T L +++ +C +++ LKQ HA ++KT D + +L C A+P+ N
Sbjct: 17 PSSGSLSGNTYLRLIDTQC-STMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMN 75
Query: 81 FTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNS--RPNKFTYPTLF 138
+ A VF I N FV N ++G + P AIS + M+ + +P + TYP++F
Sbjct: 76 Y--AYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVF 133
Query: 139 KACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTD 198
KA G ++G Q H V+K+GL D I+
Sbjct: 134 KAYGRLGQARDGRQLHGMVIKEGLEDDSFIR----------------------------- 164
Query: 199 VICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGE 258
N M+ Y+ CG + A +F+ M +V +WN+MI G A+CG+I+ A+ LFDEM +
Sbjct: 165 ----NTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQ 220
Query: 259 RDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWI 318
R+ +SW+++I G+++ FK+AL++F +MQ + +KP + S+L CA +G+ +QGRWI
Sbjct: 221 RNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWI 280
Query: 319 HSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRA 378
H ++ RN ++++++ TALIDMY KCG ++ VFE +++S WN+MI GLA +G
Sbjct: 281 HEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFE 340
Query: 379 EDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGC 438
E AM LF+++ +P+ V+F+GVL ACAH+G V R F MK Y IEP ++H+
Sbjct: 341 ERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTL 400
Query: 439 VVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRN 498
+V++LG AGL+EEAE I++MPV+ + +W +LL+ACR GNVE+ +R L ++P
Sbjct: 401 MVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDE 460
Query: 499 SGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQM 558
+ Y LLSN YA G +++ R LMKER +E G S +++ +VHEF +HP+
Sbjct: 461 TCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTHPKS 520
Query: 559 KEIYLMLE 566
EIY +L+
Sbjct: 521 AEIYSLLD 528
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 380 bits (976), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/543 (34%), Positives = 321/543 (59%), Gaps = 40/543 (7%)
Query: 26 KLSQKTVLDILNKKCFHSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLAT 85
+LS++ L + + C ++ H+ HA I++T H D FV L++ + ++ A
Sbjct: 25 RLSRRKTLISVLRSC-KNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCST--LDSVDYAY 81
Query: 86 KVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTG 145
VF + PNV++ + G + +G +S YH+M+ + P+ + ++ KAC
Sbjct: 82 DVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC---- 137
Query: 146 SVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAM 205
+K + HA V+K G +S G++M +G
Sbjct: 138 DLKVCREIHAQVLKLGFGSS---RSVGLKMMEIYG------------------------- 169
Query: 206 IDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWS 265
K GE+ A ++F MPD++ + MI+ + CG I+ A LF ++ +D + W+
Sbjct: 170 -----KSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWT 224
Query: 266 AIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERN 325
A+IDG ++ + +ALE+F +MQ E + + +L+ C+++G+L+ GRW+HSFVE
Sbjct: 225 AMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQ 284
Query: 326 SIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLF 385
+++ +G ALI+MY +CG ++ A VF M+ ++V ++N MI GLA+HG + +A+ F
Sbjct: 285 RMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEF 344
Query: 386 TKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGR 445
M +PN VT V +LNAC+H G+++ GL +FNSMKRV+ +EP++EH+GC+VDLLGR
Sbjct: 345 RDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGR 404
Query: 446 AGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALL 505
G +EEA +FIE++P++P+ + G LL+AC+IHGN+ELGE++ L + E +SG Y LL
Sbjct: 405 VGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLL 464
Query: 506 SNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLML 565
SN+YA +G+W + +R+ M++ GIE PG S +++ ++HEF +GD +HP + IY L
Sbjct: 465 SNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRL 524
Query: 566 EKM 568
+++
Sbjct: 525 QEL 527
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 380 bits (975), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/612 (32%), Positives = 320/612 (52%), Gaps = 73/612 (11%)
Query: 128 RPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYA---------- 177
+P TY L + C+ T +++EG + H + G + I + ++MYA
Sbjct: 82 KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARK 141
Query: 178 ---------------------SFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVE 216
GL EARK+ DE T+ D W AM+ GY+K + E
Sbjct: 142 VFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDE--MTEKDSYSWTAMVTGYVKKDQPE 199
Query: 217 AANEVFVNMP----------------------------------------DKNVGSWNAM 236
A ++ M D + W+++
Sbjct: 200 EALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSL 259
Query: 237 ISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSR 296
+ +CG I+ AR +FD++ E+D +SW+++ID Y K ++E +F ++ +P+
Sbjct: 260 MDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNE 319
Query: 297 HLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEK 356
+ +L CA++ + + G+ +H ++ R + ++L+DMY KCG ++ A V +
Sbjct: 320 YTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDG 379
Query: 357 MKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERG 416
++ +W ++IGG A +G+ ++A+K F + KP+ VTFV VL+AC HAG+VE+G
Sbjct: 380 CPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKG 439
Query: 417 LGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACR 476
L F S+ + + +H+ C+VDLL R+G E+ + I MP+KP+ +W ++L C
Sbjct: 440 LEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCS 499
Query: 477 IHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGS 536
+GN++L E L +EP N Y ++NIYA AG+W++ ++RK M+E G+ PGS
Sbjct: 500 TYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGS 559
Query: 537 SMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKETV 596
S ++ K H F D+SHP +I L ++ K++ EGY P TS+V +D+E+E+KE
Sbjct: 560 SWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEEN 619
Query: 597 LKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHH 656
L HSEK+A+AF +L + GT + + KNLR C DCH A K +S I I +RD R+H
Sbjct: 620 LVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHC 679
Query: 657 FKNGMCSCKDFW 668
F+NG CSC D+W
Sbjct: 680 FENGQCSCGDYW 691
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 169/376 (44%), Gaps = 51/376 (13%)
Query: 84 ATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMM-VLNSRPNKFTYPTLFKACA 142
A K+FD + + + + G ++ +P +A+ Y M V NSRPN FT A A
Sbjct: 170 ARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAA 229
Query: 143 VTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICW 202
++ G + H +V+ GL D + S+ + MY G EAR + D+ + DV+ W
Sbjct: 230 AVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKI--VEKDVVSW 287
Query: 203 NAMIDGYLK--------------CGEVEAANE--------VFVNMPDKNVG--------- 231
+MID Y K G E NE ++ + +G
Sbjct: 288 TSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTR 347
Query: 232 --------SWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEV 283
+ ++++ +CG IE+A+ + D + D +SW+++I G + EAL+
Sbjct: 348 VGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKY 407
Query: 284 FHQMQREKIKPSRHLLPSMLTVCANVGSLDQG-RWIHSFVERNSIQVDAVLGTALIDMYV 342
F + + KP ++L+ C + G +++G + +S E++ + + T L+D+
Sbjct: 408 FDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLA 467
Query: 343 KCGRLDMAWEVFEKMKVREVS-TWNAMIGGLAIHGR---AEDAMKLFTKMNGEKRKPNGV 398
+ GR + V +M ++ W +++GG + +G AE+A + K+ E N V
Sbjct: 468 RSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPE----NPV 523
Query: 399 TFVGVLNACAHAGMVE 414
T+V + N A AG E
Sbjct: 524 TYVTMANIYAAAGKWE 539
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 83/166 (50%), Gaps = 8/166 (4%)
Query: 268 IDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSI 327
ID Q+ +EA+++ + + KP +++ VC+ +L++G+ +H + +
Sbjct: 61 IDVLCGQKLLREAVQLLGRAK----KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGF 116
Query: 328 QVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTK 387
V+ L+ MY KCG L A +VF++M R++ +WN M+ G A G E+A KLF +
Sbjct: 117 VPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDE 176
Query: 388 MNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEM 433
M + + ++ ++ E L L++ M+RV P +
Sbjct: 177 MT----EKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNI 218
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 114/265 (43%), Gaps = 18/265 (6%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSI 107
KQ H + + F S +L+ Y N A V D P+P++ + G
Sbjct: 339 KQVHGYMTRVGFDPYSFASSSLVDMYTK--CGNIESAKHVVDGCPKPDLVSWTSLIGGCA 396
Query: 108 ENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQ-FHAFVVKQGLTGDV 166
+NG+P +A+ + ++ ++P+ T+ + AC G V++G++ F++ K L+
Sbjct: 397 QNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTS 456
Query: 167 HIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEV----EAANEVF 222
+ + + A G F + + ++ E + + W +++ G G + EAA E+F
Sbjct: 457 DHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFL-WASVLGGCSTYGNIDLAEEAAQELF 515
Query: 223 VNMPDKNVGSWNAMISGLARCGMIENA---RTLFDEMG--ERDEISWSAIIDGYIKQRCF 277
P+ V ++ M + A G E R E+G +R SW+ I ++R
Sbjct: 516 KIEPENPV-TYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEI----KRKRHV 570
Query: 278 KEALEVFHQMQREKIKPSRHLLPSM 302
A + H M + ++ R L M
Sbjct: 571 FIAADTSHPMYNQIVEFLRELRKKM 595
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/581 (34%), Positives = 321/581 (55%), Gaps = 42/581 (7%)
Query: 128 RPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARK 187
+P+ T ++ +AC + + +++K G + +++ I +YA G AR
Sbjct: 304 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARD 363
Query: 188 MLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVF----------------------VNM 225
+ + D + WN++I GY++ G++ A ++F +
Sbjct: 364 VFN--SMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRL 421
Query: 226 PDKNVGSW-----------------NAMISGLARCGMIENARTLFDEMGERDEISWSAII 268
D G NA+I A+CG + ++ +F MG D ++W+ +I
Sbjct: 422 ADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVI 481
Query: 269 DGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQ 328
++ F L+V QM++ ++ P L +CA++ + G+ IH + R +
Sbjct: 482 SACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYE 541
Query: 329 VDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKM 388
+ +G ALI+MY KCG L+ + VFE+M R+V TW MI ++G E A++ F M
Sbjct: 542 SELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADM 601
Query: 389 NGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGL 448
P+ V F+ ++ AC+H+G+V+ GL F MK Y+I+P +EH+ CVVDLL R+
Sbjct: 602 EKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQK 661
Query: 449 VEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNI 508
+ +AE+FI++MP+KP+ ++W ++L ACR G++E ERV ++++ P + G L SN
Sbjct: 662 ISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNA 721
Query: 509 YAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKM 568
YA +WD V+ +RK +K++ I PG S +++G VH F GD S PQ + IY LE +
Sbjct: 722 YAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEIL 781
Query: 569 MDKLQIEGYSPNTSMVSYDI-EEEEKETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRV 627
+ EGY P+ VS ++ EEEEK ++ HSE++A+AFGLL+ +PGT L ++KNLRV
Sbjct: 782 YSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRV 841
Query: 628 CADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
C DCH KL+SKI G I++RD R+H FK+G CSCKD W
Sbjct: 842 CGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 119/486 (24%), Positives = 230/486 (47%), Gaps = 49/486 (10%)
Query: 43 SLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCI-PRPNVFVCNI 101
+L L++ HA+++ F SG L+ Y++ F + VF + P NV++ N
Sbjct: 19 NLNELRRIHALVISLGLDSSDFFSGKLIDKYSH--FREPASSLSVFRRVSPAKNVYLWNS 76
Query: 102 YLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQG 161
++ +NG +A+ Y K+ P+K+T+P++ KACA + G + ++ G
Sbjct: 77 IIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMG 136
Query: 162 LTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEV 221
D+ + +A + MY+ GL AR++ DE D++ WN++I GY G E A E+
Sbjct: 137 FESDLFVGNALVDMYSRMGLLTRARQVFDE--MPVRDLVSWNSLISGYSSHGYYEEALEI 194
Query: 222 FVNM------PDKNVGS---------------------------------WNAMISGLAR 242
+ + PD S N +++ +
Sbjct: 195 YHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLK 254
Query: 243 CGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSM 302
+AR +FDEM RD +S++ +I GY+K +E++ +F + ++ KP + S+
Sbjct: 255 FRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSV 313
Query: 303 LTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREV 362
L C ++ L ++I++++ + +++ + LID+Y KCG + A +VF M+ ++
Sbjct: 314 LRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDT 373
Query: 363 STWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLF-N 421
+WN++I G G +AMKLF M + + + +T++ +++ ++ G GL N
Sbjct: 374 VSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSN 433
Query: 422 SMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNV 481
+K I+ + + ++D+ + G V ++ K SM V W +++AC G+
Sbjct: 434 GIKSGICIDLSVSN--ALIDMYAKCGEVGDSLKIFSSMGTGDTVT-WNTVISACVRFGDF 490
Query: 482 ELGERV 487
G +V
Sbjct: 491 ATGLQV 496
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 186/408 (45%), Gaps = 49/408 (12%)
Query: 130 NKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKML 189
+ + P + +A + + ++ E + HA V+ GL I Y+ F RE L
Sbjct: 3 TRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHF---REPASSL 59
Query: 190 DESGKTQ--TDVICWNAMIDGYLKCGEVEAANEVFVNM------PDK------------- 228
+ +V WN++I + K G A E + + PDK
Sbjct: 60 SVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGL 119
Query: 229 --------------------NVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAII 268
++ NA++ +R G++ AR +FDEM RD +SW+++I
Sbjct: 120 FDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLI 179
Query: 269 DGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQ 328
GY ++EALE++H+++ I P + S+L N+ + QG+ +H F ++ +
Sbjct: 180 SGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVN 239
Query: 329 VDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKM 388
V+ L+ MY+K R A VF++M VR+ ++N MI G E+++++F +
Sbjct: 240 SVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE- 298
Query: 389 NGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSM-KRVYEIEPEMEHFGCVVDLLGRAG 447
N ++ KP+ +T VL AC H + ++N M K + +E + + ++D+ + G
Sbjct: 299 NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNI--LIDVYAKCG 356
Query: 448 LVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDME 495
+ A SM K V+ W ++++ G++ ++ +++ ME
Sbjct: 357 DMITARDVFNSMECKDTVS-WNSIISGYIQSGDLMEAMKLFKMMMIME 403
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 173/410 (42%), Gaps = 55/410 (13%)
Query: 20 DQAPSSKLSQKTVLDILNKKCFH--SLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPN 77
DQ L+ +VL + C H L K + +LK + V L+ YA
Sbjct: 301 DQFKPDLLTVSSVL----RACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAK-- 354
Query: 78 FNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTL 137
+ A VF+ + + N + G I++G+ +A+ + MM++ + + TY L
Sbjct: 355 CGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLML 414
Query: 138 FKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQT 197
+K G H+ +K G+ D+ + +A I MYA G ++ K+ G
Sbjct: 415 ISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG--TG 472
Query: 198 DVICWNAMIDGYLKCGEVEAANEVFVNM------PD----------------KNVGS--- 232
D + WN +I ++ G+ +V M PD K +G
Sbjct: 473 DTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIH 532
Query: 233 --------------WNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFK 278
NA+I ++CG +EN+ +F+ M RD ++W+ +I Y +
Sbjct: 533 CCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGE 592
Query: 279 EALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVE-RNSIQVDAVLG--T 335
+ALE F M++ I P + +++ C++ G +D+G + F + + ++D ++
Sbjct: 593 KALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEG--LACFEKMKTHYKIDPMIEHYA 650
Query: 336 ALIDMYVKCGRLDMAWEVFEKMKVR-EVSTWNAMIGGLAIHGRAEDAMKL 384
++D+ + ++ A E + M ++ + S W +++ G E A ++
Sbjct: 651 CVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERV 700
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/623 (34%), Positives = 327/623 (52%), Gaps = 80/623 (12%)
Query: 13 KPIELSSDQAPSSKLSQKTVLDILNKKCFHSLQHLKQAHAIILKTAHFHDHFVSGTLLKC 72
KPI +S S + +L +L +KC L HLKQ A ++ D F S L+
Sbjct: 40 KPINWNSTH---SFVLHNPLLSLL-EKC-KLLLHLKQIQAQMIINGLILDPFASSRLIAF 94
Query: 73 YANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMM---VLNSRP 129
A + K+ I PN+F N+ ++G E+ P ++ Y +M+ SRP
Sbjct: 95 CALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRP 154
Query: 130 NKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKML 189
+ FTYP LFK CA G V+K L H+ +A I M+AS G ARK+
Sbjct: 155 DHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVF 214
Query: 190 DESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM------PDK--------------- 228
DES D++ WN +I+GY K GE E A V+ M PD
Sbjct: 215 DES--PVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGD 272
Query: 229 ------------------NVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDG 270
+ NA++ ++CG I AR +FD + +R +SW+ +I G
Sbjct: 273 LNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISG 332
Query: 271 Y-------IKQRCF------------------------KEALEVFHQMQREKIKPSRHLL 299
Y + ++ F ++AL +F +MQ KP +
Sbjct: 333 YARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITM 392
Query: 300 PSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKV 359
L+ C+ +G+LD G WIH ++E+ S+ ++ LGT+L+DMY KCG + A VF ++
Sbjct: 393 IHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQT 452
Query: 360 REVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGL 419
R T+ A+IGGLA+HG A A+ F +M P+ +TF+G+L+AC H GM++ G
Sbjct: 453 RNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDY 512
Query: 420 FNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHG 479
F+ MK + + P+++H+ +VDLLGRAGL+EEA++ +ESMP++ + AVWGALL CR+HG
Sbjct: 513 FSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHG 572
Query: 480 NVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMM 539
NVELGE+ LL+++P +SG Y LL +Y +A W+D R R++M ERG+E +PG S +
Sbjct: 573 NVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSI 632
Query: 540 DMGGKVHEFKMGDSSHPQMKEIY 562
++ G V EF + D S P+ ++IY
Sbjct: 633 EVNGIVCEFIVRDKSRPESEKIY 655
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/658 (31%), Positives = 337/658 (51%), Gaps = 44/658 (6%)
Query: 51 HAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENG 110
H +++K V TLL+ YA + A VF +P ++ N + + +G
Sbjct: 284 HGLVVKMGFDSVVCVCNTLLRMYAGAGRS--VEANLVFKQMPTKDLISWNSLMASFVNDG 341
Query: 111 EPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKS 170
A+ M+ N T+ + AC ++G H VV GL + I +
Sbjct: 342 RSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGN 401
Query: 171 AGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNV 230
A + MY G E+R++L + + DV+ WNA+I GY + + + A F M + V
Sbjct: 402 ALVSMYGKIGEMSESRRVLLQ--MPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGV 459
Query: 231 GS----------------------------------------WNAMISGLARCGMIENAR 250
S N++I+ A+CG + +++
Sbjct: 460 SSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQ 519
Query: 251 TLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVG 310
LF+ + R+ I+W+A++ +E L++ +M+ + + L+ A +
Sbjct: 520 DLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLA 579
Query: 311 SLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIG 370
L++G+ +H + + D+ + A DMY KCG + ++ R + +WN +I
Sbjct: 580 VLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILIS 639
Query: 371 GLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIE 430
L HG E+ F +M KP VTFV +L AC+H G+V++GL ++ + R + +E
Sbjct: 640 ALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLE 699
Query: 431 PEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWI 490
P +EH CV+DLLGR+G + EAE FI MP+KPN VW +LL +C+IHGN++ G +
Sbjct: 700 PAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAEN 759
Query: 491 LLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKM 550
L +EP + Y L SN++A GRW+DV VRK M + I+ S + + KV F +
Sbjct: 760 LSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGI 819
Query: 551 GDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGL 610
GD +HPQ EIY LE + ++ GY +TS D +EE+KE L HSE++ALA+ L
Sbjct: 820 GDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYAL 879
Query: 611 LHAKPGTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
+ G+T+ I KNLR+C+DCHS +K VS++ G I++RD+ R+HHF+ G+CSCKD+W
Sbjct: 880 MSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 114/435 (26%), Positives = 195/435 (44%), Gaps = 44/435 (10%)
Query: 78 FNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTL 137
F A +FD +P N N + G + G + + + KM L +P+ F +L
Sbjct: 5 FGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASL 64
Query: 138 FKACAVTGSV-KEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQ 196
AC +GS+ +EGVQ H FV K GL DV++ +A + +Y +GL +RK+ +E
Sbjct: 65 VTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE--MPD 122
Query: 197 TDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGS------------------------ 232
+V+ W +++ GY GE E +++ M + VG
Sbjct: 123 RNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQI 182
Query: 233 ---------------WNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCF 277
N++IS L G ++ A +FD+M ERD ISW++I Y +
Sbjct: 183 IGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHI 242
Query: 278 KEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTAL 337
+E+ +F M+R + + + ++L+V +V GR IH V + + L
Sbjct: 243 EESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTL 302
Query: 338 IDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNG 397
+ MY GR A VF++M +++ +WN+++ GR+ DA+ L M + N
Sbjct: 303 LRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNY 362
Query: 398 VTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIE 457
VTF L AC E+G + + + V + +V + G+ G + E+ + +
Sbjct: 363 VTFTSALAACFTPDFFEKGR-ILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLL 421
Query: 458 SMPVKPNVAVWGALL 472
MP + +V W AL+
Sbjct: 422 QMP-RRDVVAWNALI 435
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 111/475 (23%), Positives = 195/475 (41%), Gaps = 48/475 (10%)
Query: 49 QAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIE 108
Q H + K+ D +VS +L Y + + + KVF+ +P NV + G +
Sbjct: 80 QVHGFVAKSGLLSDVYVSTAILHLYGV--YGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 137
Query: 109 NGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHI 168
GEP + I Y M N+ + + +C + G Q VVK GL + +
Sbjct: 138 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 197
Query: 169 KSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMP-- 226
+++ I M S G A + D+ ++ D I WN++ Y + G +E + +F M
Sbjct: 198 ENSLISMLGSMGNVDYANYIFDQ--MSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRF 255
Query: 227 -------------------------------------DKNVGSWNAMISGLARCGMIENA 249
D V N ++ A G A
Sbjct: 256 HDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA 315
Query: 250 RTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANV 309
+F +M +D ISW++++ ++ +AL + M + S L C
Sbjct: 316 NLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTP 375
Query: 310 GSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMI 369
++GR +H V + + + ++G AL+ MY K G + + V +M R+V WNA+I
Sbjct: 376 DFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALI 435
Query: 370 GGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAG-MVERGLGLFNSMKRV-Y 427
GG A + A+ F M E N +T V VL+AC G ++ERG L + +
Sbjct: 436 GGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGF 495
Query: 428 EIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVE 482
E + +++ ++ + + G + ++ + + N+ W A+L A HG+ E
Sbjct: 496 ESDEHVKN--SLITMYAKCGDLSSSQDLFNGLDNR-NIITWNAMLAANAHHGHGE 547
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 126/245 (51%), Gaps = 3/245 (1%)
Query: 244 GMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSML 303
G ++ AR LFD M R+E+SW+ ++ G ++ + E +E F +M IKPS ++ S++
Sbjct: 6 GRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLV 65
Query: 304 TVCANVGSL-DQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREV 362
T C GS+ +G +H FV ++ + D + TA++ +Y G + + +VFE+M R V
Sbjct: 66 TACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNV 125
Query: 363 STWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNS 422
+W +++ G + G E+ + ++ M GE N + V+++C G +
Sbjct: 126 VSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQ 185
Query: 423 MKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVE 482
+ + +E ++ ++ +LG G V+ A + M + ++ W ++ A +G++E
Sbjct: 186 VVK-SGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTIS-WNSIAAAYAQNGHIE 243
Query: 483 LGERV 487
R+
Sbjct: 244 ESFRI 248
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 130/353 (36%), Gaps = 71/353 (20%)
Query: 44 LQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYL 103
L+ K HA I+ D V +L+ YA + + + +F+ + N+ N L
Sbjct: 480 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCG--DLSSSQDLFNGLDNRNIITWNAML 537
Query: 104 KGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLT 163
+ +G + + KM ++F++ A A ++EG Q H VK G
Sbjct: 538 AANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFE 597
Query: 164 GDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFV 223
D I +A MY+ KCGE+ ++
Sbjct: 598 HDSFIFNAAADMYS---------------------------------KCGEIGEVVKMLP 624
Query: 224 NMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEV 283
++++ SWN +IS L R G F+E
Sbjct: 625 PSVNRSLPSWNILISALGRHGY-------------------------------FEEVCAT 653
Query: 284 FHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERN-SIQVDAVLGTALIDMYV 342
FH+M IKP S+LT C++ G +D+G + + R+ ++ +ID+
Sbjct: 654 FHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLG 713
Query: 343 KCGRLDMAWEVFEKMKVREVS-TWNAMIGGLAIHG---RAEDAMKLFTKMNGE 391
+ GRL A KM ++ W +++ IHG R A + +K+ E
Sbjct: 714 RSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPE 766
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 3/134 (2%)
Query: 340 MYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVT 399
MY K GR+ A +F+ M VR +WN M+ G+ G + M+ F KM KP+
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 400 FVGVLNACAHAG-MVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIES 458
++ AC +G M G+ + + + + ++ ++ L G GLV + K E
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAK-SGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 459 MPVKPNVAVWGALL 472
MP + NV W +L+
Sbjct: 120 MPDR-NVVSWTSLM 132
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/632 (33%), Positives = 346/632 (54%), Gaps = 56/632 (8%)
Query: 79 NNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLF 138
N A +FD +P +V N + G +E G+ + A+ + +M + ++ +
Sbjct: 80 NRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM----PERSVVSWTAMV 135
Query: 139 KACAVTGSVKEGVQ-FHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDE-SGKTQ 196
C +G V + + F+ VK D ++ + Y FG +A K+ + GK
Sbjct: 136 NGCFRSGKVDQAERLFYQMPVK-----DTAAWNSMVHGYLQFGKVDDALKLFKQMPGK-- 188
Query: 197 TDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWN---------------------- 234
+VI W MI G + A ++F NM + S +
Sbjct: 189 -NVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQV 247
Query: 235 -----------------AMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCF 277
++I+ A C I ++R +FDE W+A++ GY +
Sbjct: 248 HGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKH 307
Query: 278 KEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTAL 337
++AL +F M R I P++ S L C+ +G+LD G+ +H + ++ DA +G +L
Sbjct: 308 EDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSL 367
Query: 338 IDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNG 397
+ MY G ++ A VF K+ + + +WN++I G A HGR + A +F +M ++P+
Sbjct: 368 VVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDE 427
Query: 398 VTFVGVLNACAHAGMVERGLGLFNSMKR-VYEIEPEMEHFGCVVDLLGRAGLVEEAEKFI 456
+TF G+L+AC+H G +E+G LF M + I+ +++H+ C+VD+LGR G ++EAE+ I
Sbjct: 428 ITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELI 487
Query: 457 ESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWD 516
E M VKPN VW ALL+ACR+H +V+ GE+ + +++ ++S Y LLSNIYA AGRW
Sbjct: 488 ERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWS 547
Query: 517 DVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEG 576
+V+++R MK+ GI PGSS + + GK HEF GD P IY LE + +KL+ G
Sbjct: 548 NVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGD--QPHCSRIYEKLEFLREKLKELG 605
Query: 577 YSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFK 636
Y+P+ +D+E+E+KE +L HSE++A+AFGL++ G+ + ++KNLRVC DCH+ K
Sbjct: 606 YAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIK 665
Query: 637 LVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
L+S + G I++RD +R+HHFKNG CSC D+W
Sbjct: 666 LISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 156/359 (43%), Gaps = 68/359 (18%)
Query: 184 EARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARC 243
EAR++ ++ + + MI GY + + A +F MP ++V SWN+MISG C
Sbjct: 53 EAREVFNQVPSPHVSL--YTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVEC 110
Query: 244 GMIENARTLFDEMGERDEISWSAIIDGYIK-------QRCF------------------- 277
G + A LFDEM ER +SW+A+++G + +R F
Sbjct: 111 GDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYL 170
Query: 278 -----KEALEVFHQM----------------QREKIKPSRHLLPSML------------- 303
+AL++F QM Q E+ + L +ML
Sbjct: 171 QFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTC 230
Query: 304 --TVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVRE 361
T CAN + G +H + + + + +LI Y C R+ + +VF++ +
Sbjct: 231 VITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQ 290
Query: 362 VSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFN 421
V+ W A++ G +++ + EDA+ +F+ M PN TF LN+C+ G ++ G +
Sbjct: 291 VAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHG 350
Query: 422 SMKRVYEIEPEMEHFGCVVDLLGRAGLVEEA-EKFIESMPVKPNVAVWGALLNACRIHG 479
++ +E + +V + +G V +A FI+ K ++ W +++ C HG
Sbjct: 351 VAVKL-GLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIF--KKSIVSWNSIIVGCAQHG 406
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 133/279 (47%), Gaps = 28/279 (10%)
Query: 205 MIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISW 264
+I +L ++ A EVF +P +V + MI+G R + +A LFDEM RD +SW
Sbjct: 41 LICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSW 100
Query: 265 SAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLP--SMLTVCANVGSLDQGRWIHSFV 322
+++I G ++ A+++F +M P R ++ +M+ C G +DQ
Sbjct: 101 NSMISGCVECGDMNTAVKLFDEM------PERSVVSWTAMVNGCFRSGKVDQA------- 147
Query: 323 ERNSIQV---DAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAE 379
ER Q+ D +++ Y++ G++D A ++F++M + V +W MI GL + R+
Sbjct: 148 ERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSG 207
Query: 380 DAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGL---GLFNSMKRVYEIEPEMEHF 436
+A+ LF M K F V+ ACA+A G+ GL + +YE E+
Sbjct: 208 EALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYE-----EYV 262
Query: 437 GC-VVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNA 474
++ + ++ K + V VAVW ALL+
Sbjct: 263 SASLITFYANCKRIGDSRKVFDE-KVHEQVAVWTALLSG 300
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 148/326 (45%), Gaps = 30/326 (9%)
Query: 49 QAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIE 108
Q H +I+K ++ +VS +L+ YAN + KVFD V V L G
Sbjct: 246 QVHGLIIKLGFLYEEYVSASLITFYANCK--RIGDSRKVFDEKVHEQVAVWTALLSGYSL 303
Query: 109 NGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHI 168
N + A+S + M+ + PN+ T+ + +C+ G++ G + H VK GL D +
Sbjct: 304 NKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFV 363
Query: 169 KSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM--- 225
++ + MY+ G +A + + K ++ WN++I G + G + A +F M
Sbjct: 364 GNSLVVMYSDSGNVNDAVSVFIKIFKKS--IVSWNSIIVGCAQHGRGKWAFVIFGQMIRL 421
Query: 226 ---PDKNVGSWNAMISGLARCGMIENARTLFDEMG------ERDEISWSAIIDGYIKQRC 276
PD+ ++ ++S + CG +E R LF M +R ++ ++D I RC
Sbjct: 422 NKEPDEI--TFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVD--ILGRC 477
Query: 277 --FKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLG 334
KEA E+ ++R +KP+ + ++L+ C +D+G + + + A
Sbjct: 478 GKLKEAEEL---IERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAY- 533
Query: 335 TALIDMYVKCGRLDMAWEVFEKMKVR 360
L ++Y GR W K++V+
Sbjct: 534 VLLSNIYASAGR----WSNVSKLRVK 555
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 15/140 (10%)
Query: 346 RLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLN 405
R+D A EVF ++ VS + MI G R DA+ LF +M + V++ +++
Sbjct: 50 RIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVR----DVVSWNSMIS 105
Query: 406 ACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNV 465
C G + + LF+ M E + + +V+ R+G V++AE+ MPVK +
Sbjct: 106 GCVECGDMNTAVKLFDEMP-----ERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVK-DT 159
Query: 466 AVWGALLNACRIHGNVELGE 485
A W ++ +HG ++ G+
Sbjct: 160 AAWNSM-----VHGYLQFGK 174
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/593 (33%), Positives = 321/593 (54%), Gaps = 74/593 (12%)
Query: 83 LATKVFDCIPRPNVFVCNIYLKGSI---ENGEPHKAISCYHKMMVLNSRPNKFTYPTLFK 139
LA K+FD + ++ ++ +I NG P A+ Y M+ P F+ K
Sbjct: 185 LARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALK 244
Query: 140 ACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDV 199
AC ++ G HA +VK+ K + D
Sbjct: 245 ACVDLKDLRVGRGIHAQIVKR---------------------------------KEKVDQ 271
Query: 200 ICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGER 259
+ +N ++ Y++ G + ++AR +FD M ER
Sbjct: 272 VVYNVLLKLYMESG-------------------------------LFDDARKVFDGMSER 300
Query: 260 DEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIH 319
+ ++W+++I K+ E +F +MQ E I S L ++L C+ V +L G+ IH
Sbjct: 301 NVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIH 360
Query: 320 SFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAE 379
+ + ++ + D L +L+DMY KCG ++ + VF+ M +++++WN M+ AI+G E
Sbjct: 361 AQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIE 420
Query: 380 DAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCV 439
+ + LF M P+G+TFV +L+ C+ G+ E GL LF MK + + P +EH+ C+
Sbjct: 421 EVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACL 480
Query: 440 VDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNS 499
VD+LGRAG ++EA K IE+MP KP+ ++WG+LLN+CR+HGNV +GE L +EP N
Sbjct: 481 VDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNP 540
Query: 500 GRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDS----SH 555
G Y ++SNIYA A WD+V ++R++MK+RG++ G S + + K+ F G +
Sbjct: 541 GNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNS 600
Query: 556 PQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKP 615
+ K+++ L++ ++K GYSPNTS+V +D++EE K + HSE++A + L+H
Sbjct: 601 DEYKKVWTELQEAIEK---SGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGE 657
Query: 616 GTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
G + I KNLRVCADCHS K+VS++ I++RD R+HHF +G+CSCKD+W
Sbjct: 658 GVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/503 (39%), Positives = 305/503 (60%), Gaps = 8/503 (1%)
Query: 43 SLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIY 102
+++ LKQ HA ++ + V G L+ + A K+FD IP+P+V +CN
Sbjct: 24 NIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHV 83
Query: 103 LKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGL 162
L+GS ++ +P K +S Y +M P+++T+ + KAC+ G FH VV+ G
Sbjct: 84 LRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGF 143
Query: 163 TGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVF 222
+ ++K+A I +A+ G A ++ D+S K + W++M GY K G+++ A +F
Sbjct: 144 VLNEYVKNALILFHANCGDLGIASELFDDSAKAHK--VAWSSMTSGYAKRGKIDEAMRLF 201
Query: 223 VNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALE 282
MP K+ +WN MI+G +C +++AR LFD E+D ++W+A+I GY+ KEAL
Sbjct: 202 DEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALG 261
Query: 283 VFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFV-ERNSIQVDAVLGT----AL 337
+F +M+ P + S+L+ CA +G L+ G+ +H ++ E S+ +GT AL
Sbjct: 262 IFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNAL 321
Query: 338 IDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNG 397
IDMY KCG +D A EVF +K R++STWN +I GLA+H AE ++++F +M K PN
Sbjct: 322 IDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNE 380
Query: 398 VTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIE 457
VTF+GV+ AC+H+G V+ G F+ M+ +Y IEP ++H+GC+VD+LGRAG +EEA F+E
Sbjct: 381 VTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVE 440
Query: 458 SMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDD 517
SM ++PN VW LL AC+I+GNVELG+ LL M SG Y LLSNIYA G+WD
Sbjct: 441 SMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDG 500
Query: 518 VARVRKLMKERGIETVPGSSMMD 540
V +VRK+ + ++ G S+++
Sbjct: 501 VQKVRKMFDDTRVKKPTGVSLIE 523
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 374 bits (959), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/658 (32%), Positives = 343/658 (52%), Gaps = 44/658 (6%)
Query: 51 HAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENG 110
H+ I+K + + FV L+ Y+ + A VF+ I ++ V + +ENG
Sbjct: 169 HSPIVKLGYDSNAFVGAALINAYSVCG--SVDSARTVFEGILCKDIVVWAGIVSCYVENG 226
Query: 111 EPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKS 170
++ M + PN +T+ T KA G+ H ++K D +
Sbjct: 227 YFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGV 286
Query: 171 AGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMP---- 226
+Q+Y G +A K+ +E K DV+ W+ MI + + G A ++F+ M
Sbjct: 287 GLLQLYTQLGDMSDAFKVFNEMPKN--DVVPWSFMIARFCQNGFCNEAVDLFIRMREAFV 344
Query: 227 -----------------------------------DKNVGSWNAMISGLARCGMIENART 251
D ++ NA+I A+C ++ A
Sbjct: 345 VPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVK 404
Query: 252 LFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGS 311
LF E+ ++E+SW+ +I GY +A +F + R ++ + S L CA++ S
Sbjct: 405 LFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLAS 464
Query: 312 LDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGG 371
+D G +H + + + +LIDMY KCG + A VF +M+ +V++WNA+I G
Sbjct: 465 MDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISG 524
Query: 372 LAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEP 431
+ HG A+++ M KPNG+TF+GVL+ C++AG++++G F SM R + IEP
Sbjct: 525 YSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEP 584
Query: 432 EMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWIL 491
+EH+ C+V LLGR+G +++A K IE +P +P+V +W A+L+A N E R +
Sbjct: 585 CLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEI 644
Query: 492 LDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMG 551
L + P++ Y L+SN+YA A +W +VA +RK MKE G++ PG S ++ G VH F +G
Sbjct: 645 LKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVG 704
Query: 552 DSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLL 611
S HP MK I MLE + K GY P+ + V D+++EEK+ L HSE++ALA+GL+
Sbjct: 705 LSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLV 764
Query: 612 HAKPG-TTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
+ I+KNLR+C+DCHSA K++S I ++++RD R+HHF G+CSC D W
Sbjct: 765 RMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 162/366 (44%), Gaps = 47/366 (12%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSI 107
K H ILKT + D V LL+ Y + + A KVF+ +P+ +V + +
Sbjct: 267 KGVHGQILKTCYVLDPRVGVGLLQLYTQ--LGDMSDAFKVFNEMPKNDVVPWSFMIARFC 324
Query: 108 ENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVH 167
+NG ++A+ + +M PN+FT ++ CA+ G Q H VVK G D++
Sbjct: 325 QNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIY 384
Query: 168 IKSAGIQMYASFGLFREARKMLDE-SGKTQTDVICWNAMIDGYLKCGEVEAANEVF---- 222
+ +A I +YA A K+ E S K + + WN +I GY GE A +F
Sbjct: 385 VSNALIDVYAKCEKMDTAVKLFAELSSKNE---VSWNTVIVGYENLGEGGKAFSMFREAL 441
Query: 223 ---VNMPD--------------------------------KNVGSWNAMISGLARCGMIE 247
V++ + K V N++I A+CG I+
Sbjct: 442 RNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIK 501
Query: 248 NARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCA 307
A+++F+EM D SW+A+I GY ++AL + M+ KP+ +L+ C+
Sbjct: 502 FAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCS 561
Query: 308 NVGSLDQGR-WIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR-EVSTW 365
N G +DQG+ S + + I+ T ++ + + G+LD A ++ E + V W
Sbjct: 562 NAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIW 621
Query: 366 NAMIGG 371
AM+
Sbjct: 622 RAMLSA 627
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 108/496 (21%), Positives = 197/496 (39%), Gaps = 64/496 (12%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSI 107
K H ILK D F + LL Y F+ L +FD +P N N+
Sbjct: 69 KAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDAL--NLFDEMPERN----NVSFVTLA 122
Query: 108 ENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVH 167
+ I Y ++ N + + K + H+ +VK G +
Sbjct: 123 QGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAF 182
Query: 168 IKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM-- 225
+ +A I Y+ G AR + + G D++ W ++ Y++ G E + ++ M
Sbjct: 183 VGAALINAYSVCGSVDSARTVFE--GILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRM 240
Query: 226 ----PDK-----------NVGSWN----------------------AMISGLARCGMIEN 248
P+ +G+++ ++ + G + +
Sbjct: 241 AGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSD 300
Query: 249 ARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCAN 308
A +F+EM + D + WS +I + + EA+++F +M+ + P+ L S+L CA
Sbjct: 301 AFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAI 360
Query: 309 VGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAM 368
G +H V + +D + ALID+Y KC ++D A ++F ++ + +WN +
Sbjct: 361 GKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTV 420
Query: 369 IGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLF------NS 422
I G G A +F + + VTF L ACA ++ G+ + N+
Sbjct: 421 IVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNN 480
Query: 423 MKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVE 482
K+V ++D+ + G ++ A+ M +VA W AL++ HG
Sbjct: 481 AKKVAVSNS-------LIDMYAKCGDIKFAQSVFNEMET-IDVASWNALISGYSTHG--- 529
Query: 483 LGERVGWILLDMEPRN 498
LG + IL M+ R+
Sbjct: 530 LGRQALRILDIMKDRD 545
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 372 bits (954), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/539 (36%), Positives = 310/539 (57%), Gaps = 7/539 (1%)
Query: 47 LKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGS 106
L+ A A ++KT+ D + + A +F LA + PNVFV N KG
Sbjct: 789 LESALAAMIKTSLNQDCRLMNQFIT--ACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGF 846
Query: 107 IENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDV 166
+ P +++ Y +M+ + P+ +TY +L KA + E +Q H + K G V
Sbjct: 847 VTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAH--IWKFGFGFHV 904
Query: 167 HIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMP 226
I++ I Y++ G REARK+ DE + D I W M+ Y + ++++AN + M
Sbjct: 905 KIQTTLIDFYSATGRIREARKVFDE--MPERDDIAWTTMVSAYRRVLDMDSANSLANQMS 962
Query: 227 DKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQ 286
+KN + N +I+G G +E A +LF++M +D ISW+ +I GY + + ++EA+ VF++
Sbjct: 963 EKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYK 1022
Query: 287 MQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGR 346
M E I P + ++++ CA++G L+ G+ +H + +N +D +G+AL+DMY KCG
Sbjct: 1023 MMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGS 1082
Query: 347 LDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNA 406
L+ A VF + + + WN++I GLA HG A++A+K+F KM E KPN VTFV V A
Sbjct: 1083 LERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTA 1142
Query: 407 CAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVA 466
C HAG+V+ G ++ SM Y I +EH+G +V L +AGL+ EA + I +M +PN
Sbjct: 1143 CTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAV 1202
Query: 467 VWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMK 526
+WGALL+ CRIH N+ + E L+ +EP NSG Y LL ++YA+ RW DVA +R M+
Sbjct: 1203 IWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMR 1262
Query: 527 ERGIETV-PGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMV 584
E GIE + PG+S + + + H F D SH E+ L+L+++ D++ + GY T V
Sbjct: 1263 ELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQETENV 1321
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 224/654 (34%), Positives = 340/654 (51%), Gaps = 56/654 (8%)
Query: 64 FVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMM 123
F ++K YA + +A ++FD IP+P+ N + G + E A+ + +M
Sbjct: 75 FSYNVIVKAYAKDS--KIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMR 132
Query: 124 VLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFR 183
L + FT L AC V Q H F V G + +A + Y+ GL R
Sbjct: 133 KLGFEVDGFTLSGLIAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLR 190
Query: 184 EARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM------------------ 225
EA + + + D + WN+MI Y + E A ++ M
Sbjct: 191 EAVSVFYGMDELR-DEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNA 249
Query: 226 -----------------------PDKNVGSWNAMISGLARCGMIE---NARTLFDEMGER 259
+ +VGS +I ++CG + ++ +F E+
Sbjct: 250 LTSLDHLIGGRQFHGKLIKAGFHQNSHVGS--GLIDFYSKCGGCDGMYDSEKVFQEILSP 307
Query: 260 DEISWSAIIDGY-IKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWI 318
D + W+ +I GY + + +EA++ F QMQR +P + + C+N+ S Q + I
Sbjct: 308 DLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQI 367
Query: 319 HSFVERNSIQVDAV-LGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGR 377
H ++ I + + + ALI +Y K G L A VF++M ++N MI G A HG
Sbjct: 368 HGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGH 427
Query: 378 AEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFG 437
+A+ L+ +M PN +TFV VL+ACAH G V+ G FN+MK ++IEPE EH+
Sbjct: 428 GTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYS 487
Query: 438 CVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPR 497
C++DLLGRAG +EEAE+FI++MP KP W ALL ACR H N+ L ER L+ M+P
Sbjct: 488 CMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPL 547
Query: 498 NSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQ 557
+ Y +L+N+YA A +W+++A VRK M+ + I PG S +++ K H F D SHP
Sbjct: 548 AATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPM 607
Query: 558 MKEIYLMLEKMMDKLQIEGYSPNT--SMVSYDIEEEEKETV-LKQHSEKIALAFGLLHAK 614
++E+ LE+MM K++ GY + +MV D E E + L HSEK+A+AFGL+ +
Sbjct: 608 IREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTR 667
Query: 615 PGTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
G L +VKNLR+C DCH+A K +S + G II+RD +R+H FK+G CSC D+W
Sbjct: 668 DGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 130/288 (45%), Gaps = 12/288 (4%)
Query: 203 NAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEI 262
N ++ Y KCG + A F + + NV S+N ++ A+ I AR LFDE+ + D +
Sbjct: 47 NHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTV 106
Query: 263 SWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFV 322
S++ +I GY R A+ +F +M++ + L ++ C + +D + +H F
Sbjct: 107 SYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCD--RVDLIKQLHCFS 164
Query: 323 ERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKM-KVREVSTWNAMIGGLAIHGRAEDA 381
+ + A + Y K G L A VF M ++R+ +WN+MI H A
Sbjct: 165 VSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKA 224
Query: 382 MKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGC-VV 440
+ L+ +M + K + T VLNA + G K + + H G ++
Sbjct: 225 LALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHG--KLIKAGFHQNSHVGSGLI 282
Query: 441 DLLGRAGLVE---EAEKFIESMPVKPNVAVWGALLNACRIHGNVELGE 485
D + G + ++EK + + + P++ VW +++ + N EL E
Sbjct: 283 DFYSKCGGCDGMYDSEKVFQEI-LSPDLVVWNTMISGYSM--NEELSE 327
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 80/191 (41%), Gaps = 11/191 (5%)
Query: 43 SLQHLKQAHAIILKTAHFHDHFVS--GTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCN 100
S KQ H + +K+ H + +S L+ Y N A VFD +P N N
Sbjct: 360 SPSQCKQIHGLAIKS-HIPSNRISVNNALISLYYKSG--NLQDARWVFDRMPELNAVSFN 416
Query: 101 IYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQ-FHAFVVK 159
+KG ++G +A+ Y +M+ PNK T+ + ACA G V EG + F+
Sbjct: 417 CMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKET 476
Query: 160 QGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEV---- 215
+ + S I + G EA + +D + + + W A++ K +
Sbjct: 477 FKIEPEAEHYSCMIDLLGRAGKLEEAERFID-AMPYKPGSVAWAALLGACRKHKNMALAE 535
Query: 216 EAANEVFVNMP 226
AANE+ V P
Sbjct: 536 RAANELMVMQP 546
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/586 (34%), Positives = 322/586 (54%), Gaps = 65/586 (11%)
Query: 84 ATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAV 143
A KVFD +P + N + G I+ + +S + +M L P+++T ++F A
Sbjct: 44 ARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAG 103
Query: 144 TGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWN 203
SV G Q H + +K GL D+ + S+ MY
Sbjct: 104 LRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMY--------------------------- 136
Query: 204 AMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEIS 263
M +G L+ GE+ V +MP +N+ +WN +I G A+ G
Sbjct: 137 -MRNGKLQDGEI-----VIRSMPVRNLVAWNTLIMGNAQNG------------------- 171
Query: 264 WSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVE 323
C + L ++ M+ +P++ ++L+ C+++ QG+ IH+
Sbjct: 172 ------------CPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAI 219
Query: 324 RNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMK 383
+ + ++LI MY KCG L A + F + + + W++MI HG+ ++A++
Sbjct: 220 KIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIE 279
Query: 384 LFTKMNGEKR-KPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDL 442
LF M + + N V F+ +L AC+H+G+ ++GL LF+ M Y +P ++H+ CVVDL
Sbjct: 280 LFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDL 339
Query: 443 LGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRY 502
LGRAG +++AE I SMP+K ++ +W LL+AC IH N E+ +RV +L ++P +S Y
Sbjct: 340 LGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACY 399
Query: 503 ALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIY 562
LL+N++A A RW DV+ VRK M+++ ++ G S + G+VH+FKMGD S + KEIY
Sbjct: 400 VLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIY 459
Query: 563 LMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLHIV 622
L+++ +++++GY P+T+ V +D++EEEKE+ L QHSEK+A+AF L+ G + I+
Sbjct: 460 SYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRII 519
Query: 623 KNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
KNLRVC+DCH AFK +S I I +RD R+HHF NG CSC D+W
Sbjct: 520 KNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 137/281 (48%), Gaps = 20/281 (7%)
Query: 209 YLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAII 268
Y K G+ +A V+ M KN S N +I+G R G + NAR +FDEM +R +W+A+I
Sbjct: 4 YSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMI 63
Query: 269 DGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQ 328
G I+ +E L +F +M P + L S+ + A + S+ G+ IH + + ++
Sbjct: 64 AGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLE 123
Query: 329 VDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKM 388
+D V+ ++L MY++ G+L V M VR + WN +I G A +G E + L+ M
Sbjct: 124 LDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMM 183
Query: 389 NGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFG---------CV 439
+PN +TFV VL++C+ + RG G +I E G +
Sbjct: 184 KISGCRPNKITFVTVLSSCSDLAI--RGQG--------QQIHAEAIKIGASSVVAVVSSL 233
Query: 440 VDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGN 480
+ + + G + +A K + V +W ++++A HG
Sbjct: 234 ISMYSKCGCLGDAAKAFSEREDEDEV-MWSSMISAYGFHGQ 273
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 117/270 (43%), Gaps = 19/270 (7%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYA-NPNFNNFTLATKVFDCIPRPNVFVCNIYLKGS 106
+Q H +K D V+ +L Y N + + V +P N+ N + G+
Sbjct: 111 QQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEI---VIRSMPVRNLVAWNTLIMGN 167
Query: 107 IENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDV 166
+NG P + Y M + RPNK T+ T+ +C+ +G Q HA +K G + V
Sbjct: 168 AQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVV 227
Query: 167 HIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMP 226
+ S+ I MY+ G +A K E + D + W++MI Y G+ + A E+F M
Sbjct: 228 AVVSSLISMYSKCGCLGDAAKAFSE--REDEDEVMWSSMISAYGFHGQGDEAIELFNTMA 285
Query: 227 DKNVGSWN--AMISGLARC---GMIENARTLFDEMGERDEIS-----WSAIIDGYIKQRC 276
++ N A ++ L C G+ + LFD M E+ ++ ++D + C
Sbjct: 286 EQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGC 345
Query: 277 FKEALEVFHQMQREKIKPSRHLLPSMLTVC 306
+A + M IK + ++L+ C
Sbjct: 346 LDQAEAIIRSM---PIKTDIVIWKTLLSAC 372
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 364 bits (934), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/607 (34%), Positives = 321/607 (52%), Gaps = 83/607 (13%)
Query: 82 TLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKAC 141
+ A K+F IP P+V V N +KG + + + Y M+ P+ T+P L
Sbjct: 85 SYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGL 144
Query: 142 AVTG-SVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVI 200
G ++ G + H VVK GL ++++++A ++MY+ GL AR + D + + DV
Sbjct: 145 KRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDR--RCKEDVF 202
Query: 201 CWNAMIDGYLKCGEVEAANEVFVNM----------------------PDKNVGSW----- 233
WN MI GY + E E + E+ V M DK++
Sbjct: 203 SWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYV 262
Query: 234 ------------NAMISGLARCGMIENA-------------------------------R 250
NA+++ A CG ++ A R
Sbjct: 263 SECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLAR 322
Query: 251 TLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVG 310
T FD+M RD ISW+ +IDGY++ CF E+LE+F +MQ + P + S+LT CA++G
Sbjct: 323 TYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLG 382
Query: 311 SLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIG 370
SL+ G WI +++++N I+ D V+G ALIDMY KCG + A +VF M R+ TW AM+
Sbjct: 383 SLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVV 442
Query: 371 GLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIE 430
GLA +G+ ++A+K+F +M +P+ +T++GVL+AC H+GMV++ F M+ + IE
Sbjct: 443 GLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIE 502
Query: 431 PEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWI 490
P + H+GC+VD+LGRAGLV+EA + + MP+ PN VWGALL A R+H + + E
Sbjct: 503 PSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKK 562
Query: 491 LLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKM 550
+L++EP N YALL NIYA RW D+ VR+ + + I+ PG S++++ G HEF
Sbjct: 563 ILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVA 622
Query: 551 GDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGL 610
GD SH Q +EIY+ LE++ + Y P+TS + ++ + + +A F
Sbjct: 623 GDKSHLQSEEIYMKLEELAQESTFAAYLPDTSELLFEAGD----------AYSVANRFVR 672
Query: 611 LHAKPGT 617
L PGT
Sbjct: 673 LSGHPGT 679
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 183/418 (43%), Gaps = 37/418 (8%)
Query: 116 ISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQM 175
+S +K+ V P+ + + K + EGV+ + ++K+G+T D H +
Sbjct: 84 VSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLN- 142
Query: 176 YASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNA 235
GL R+ G L CG+ + V + N+ NA
Sbjct: 143 ----GLKRDG----------------------GALACGKKLHCHVVKFGL-GSNLYVQNA 175
Query: 236 MISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPS 295
++ + CG+++ AR +FD + D SW+ +I GY + + ++E++E+ +M+R + P+
Sbjct: 176 LVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPT 235
Query: 296 RHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFE 355
L +L+ C+ V D + +H +V + L AL++ Y CG +D+A +F
Sbjct: 236 SVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFR 295
Query: 356 KMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVER 415
MK R+V +W +++ G G + A F +M R +++ +++ AG
Sbjct: 296 SMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDR----ISWTIMIDGYLRAGCFNE 351
Query: 416 GLGLFNSMKRVYEIEPEMEHFGCVVDL--LGRAGLVEEAEKFIESMPVKPNVAVWGALLN 473
L +F M+ I E + LG + E + +I+ +K +V V AL++
Sbjct: 352 SLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALID 411
Query: 474 ACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIE 531
G E ++V DM+ R+ + + A G+ + +V M++ I+
Sbjct: 412 MYFKCGCSEKAQKV---FHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQ 466
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 11/217 (5%)
Query: 80 NFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFK 139
N LA FD +P + I + G + G ++++ + +M P++FT ++
Sbjct: 317 NLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLT 376
Query: 140 ACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDV 199
ACA GS++ G ++ K + DV + +A I MY G +A+K+ + Q D
Sbjct: 377 ACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHD--MDQRDK 434
Query: 200 ICWNAMIDGYLKCGEVEAANEVFVNMPDKNVG----SWNAMISGLARCGMIENARTLFDE 255
W AM+ G G+ + A +VF M D ++ ++ ++S GM++ AR F +
Sbjct: 435 FTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAK 494
Query: 256 MG-----ERDEISWSAIIDGYIKQRCFKEALEVFHQM 287
M E + + ++D + KEA E+ +M
Sbjct: 495 MRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKM 531
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 361 bits (927), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/666 (30%), Positives = 346/666 (51%), Gaps = 46/666 (6%)
Query: 43 SLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIY 102
SL+ K+ HA+++K D +V +L+ Y A KVF+ +P ++ N
Sbjct: 145 SLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMK--LGCAWDAEKVFEEMPERDIVSWNSM 202
Query: 103 LKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGL 162
+ G + G+ ++ + +M+ +P++F+ + AC+ S K G + H V+ +
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRI 262
Query: 163 -TGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEV 221
TGDV + ++ + MY+ +G A ++ + G Q +++ WN MI Y + G V A
Sbjct: 263 ETGDVMVMTSILDMYSKYGEVSYAERIFN--GMIQRNIVAWNVMIGCYARNGRVTDAFLC 320
Query: 222 FVNMPDKN------VGSWN------------------------------AMISGLARCGM 245
F M ++N + S N A+I CG
Sbjct: 321 FQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQ 380
Query: 246 IENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTV 305
+++A +FD M E++ ISW++II Y++ ALE+F ++ + P + S+L
Sbjct: 381 LKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPA 440
Query: 306 CANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTW 365
A SL +GR IH+++ ++ + ++ +L+ MY CG L+ A + F + +++V +W
Sbjct: 441 YAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSW 500
Query: 366 NAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKR 425
N++I A+HG ++ LF++M + PN TF +L AC+ +GMV+ G F SMKR
Sbjct: 501 NSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKR 560
Query: 426 VYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGE 485
Y I+P +EH+GC++DL+GR G A++F+E MP P +WG+LLNA R H ++ + E
Sbjct: 561 EYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAE 620
Query: 486 RVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKV 545
+ ME N+G Y LL N+YA+AGRW+DV R++ LM+ +GI S ++ GK
Sbjct: 621 FAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKS 680
Query: 546 HEFKMGDSSHPQMKEIYLMLE---KMMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQHSE 602
H F GD SH +IY +L+ +M+ + I Y S + + + + ++HS
Sbjct: 681 HVFTNGDRSHVATNKIYEVLDVVSRMVGEEDI--YVHCVSRLRPETLVKSRSNSPRRHSV 738
Query: 603 KIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMC 662
++A FGL+ + G + + N R+C CH + S++ I++ D +HHF NG C
Sbjct: 739 RLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRC 798
Query: 663 SCKDFW 668
SC ++W
Sbjct: 799 SCGNYW 804
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 127/519 (24%), Positives = 236/519 (45%), Gaps = 71/519 (13%)
Query: 84 ATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAV 143
A ++FD + + + F+ N+ +KG G +A+ Y +M+ + + FTYP + K+ A
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 144 TGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWN 203
S++EG + HA V+K G DV++ ++ I +Y G +A K+ +E + D++ WN
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEE--MPERDIVSWN 200
Query: 204 AMIDGYLKCGEVEAANEVFVNM------PDK----------------------------- 228
+MI GYL G+ ++ +F M PD+
Sbjct: 201 SMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRS 260
Query: 229 -----NVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEV 283
+V +++ ++ G + A +F+ M +R+ ++W+ +I Y + +A
Sbjct: 261 RIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLC 320
Query: 284 FHQMQREK-IKP----SRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALI 338
F +M + ++P S +LLP+ ++ +GR IH + R VL TALI
Sbjct: 321 FQKMSEQNGLQPDVITSINLLPA--------SAILEGRTIHGYAMRRGFLPHMVLETALI 372
Query: 339 DMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGV 398
DMY +CG+L A +F++M + V +WN++I +G+ A++LF ++ P+
Sbjct: 373 DMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDST 432
Query: 399 TFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIES 458
T +L A A + + G + + + + +V + G +E+A K
Sbjct: 433 TIASILPAYAESLSLSEGREIHAYIVKSRYWSNTI-ILNSLVHMYAMCGDLEDARKCFNH 491
Query: 459 MPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPR----NSGRYALLSNIYAKAGR 514
+ +K +V W +++ A +HG G W+ +M N +A L + +G
Sbjct: 492 ILLK-DVVSWNSIIMAYAVHG---FGRISVWLFSEMIASRVNPNKSTFASLLAACSISGM 547
Query: 515 WDDVARVRKLMK-ERGIETVPG----SSMMDMGGKVHEF 548
D+ + MK E GI+ PG M+D+ G+ F
Sbjct: 548 VDEGWEYFESMKREYGID--PGIEHYGCMLDLIGRTGNF 584
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 118/245 (48%), Gaps = 1/245 (0%)
Query: 237 ISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSR 296
+ G A ++E+A LFDEM + D W+ +I G+ + EA++ + +M +K
Sbjct: 71 LRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADT 130
Query: 297 HLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEK 356
P ++ A + SL++G+ IH+ V + D + +LI +Y+K G A +VFE+
Sbjct: 131 FTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEE 190
Query: 357 MKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERG 416
M R++ +WN+MI G G ++ LF +M KP+ + + L AC+H + G
Sbjct: 191 MPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMG 250
Query: 417 LGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACR 476
+ R ++ ++D+ + G V AE+ M ++ N+ W ++
Sbjct: 251 KEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNVMIGCYA 309
Query: 477 IHGNV 481
+G V
Sbjct: 310 RNGRV 314
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 360 bits (924), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 208/598 (34%), Positives = 322/598 (53%), Gaps = 62/598 (10%)
Query: 30 KTVLDILNKKCFHSLQHLKQAHAIILKTAHFH---DHFVSGTLLKCYANPNFNNFTLATK 86
KT+LD+ H L HLKQ H ++L + F+ D F+S L +C F A +
Sbjct: 5 KTLLDL----PLHFL-HLKQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAAT--QFRYARR 57
Query: 87 VFDCIPRPNVFVCNIYLKGSIENG---EPHKAISCYHKMMVLNSRPNKFTYPTLFKACAV 143
+ + ++ + + L G G + Y M P++ T+P L KA
Sbjct: 58 LLCQLQTLSIQLWD-SLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFK 116
Query: 144 TGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWN 203
QFHA +VK GL D ++++ I Y+S GLF A ++ D G DV+ W
Sbjct: 117 LRD-SNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFD--GAEDKDVVTWT 173
Query: 204 AMIDGYLKCGEVEAANEVFVNMPDKNVGS------------------------------- 232
AMIDG+++ G A FV M V +
Sbjct: 174 AMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLET 233
Query: 233 ---------WNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEV 283
++++ +C ++A+ +FDEM R+ ++W+A+I GY++ RCF + + V
Sbjct: 234 GRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLV 293
Query: 284 FHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVK 343
F +M + + P+ L S+L+ CA+VG+L +GR +H ++ +NSI+++ GT LID+YVK
Sbjct: 294 FEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVK 353
Query: 344 CGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGV 403
CG L+ A VFE++ + V TW AMI G A HG A DA LF M PN VTF+ V
Sbjct: 354 CGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAV 413
Query: 404 LNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKP 463
L+ACAH G+VE G LF SMK + +EP+ +H+ C+VDL GR GL+EEA+ IE MP++P
Sbjct: 414 LSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEP 473
Query: 464 NVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRK 523
VWGAL +C +H + ELG+ ++ ++P +SGRY LL+N+Y+++ WD+VARVRK
Sbjct: 474 TNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRK 533
Query: 524 LMKERGIETVPGSSMMDMGGKVHEFKMGDSSHP-QMKEIYLMLEKMMDKLQIEGYSPN 580
MK++ + PG S +++ GK+ EF D P + ++Y K +D + ++ P+
Sbjct: 534 QMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLY----KTLDTVGVQMRLPD 587
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 359 bits (922), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 200/632 (31%), Positives = 334/632 (52%), Gaps = 50/632 (7%)
Query: 82 TLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMV--LNSRPNKFTYPTLFK 139
T A +F NV N + G G+ H +M+ + + ++ T
Sbjct: 344 TNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVP 403
Query: 140 ACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDV 199
C + + H + +KQ + + +A + YA G A+++ G V
Sbjct: 404 VCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVF--HGIRSKTV 461
Query: 200 ICWNAMI--------------------------DGYLKCGEVEAANE------------- 220
WNA+I D + C + A ++
Sbjct: 462 NSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGF 521
Query: 221 VFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEA 280
+ N ++++ + +++S CG + + LFD M ++ +SW+ +I GY++ A
Sbjct: 522 IIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRA 581
Query: 281 LEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDM 340
L VF QM I+ + + C+ + SL GR H++ ++ ++ DA + +LIDM
Sbjct: 582 LGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDM 641
Query: 341 YVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTF 400
Y K G + + +VF +K + ++WNAMI G IHG A++A+KLF +M P+ +TF
Sbjct: 642 YAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTF 701
Query: 401 VGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFI-ESM 459
+GVL AC H+G++ GL + MK + ++P ++H+ CV+D+LGRAG +++A + + E M
Sbjct: 702 LGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEM 761
Query: 460 PVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVA 519
+ +V +W +LL++CRIH N+E+GE+V L ++EP Y LLSN+YA G+W+DV
Sbjct: 762 SEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVR 821
Query: 520 RVRKLMKERGIETVPGSSMMDMGGKVHEFKMGD---SSHPQMKEIYLMLEKMMDKLQIEG 576
+VR+ M E + G S +++ KV F +G+ ++K ++ +LE + K+ G
Sbjct: 822 KVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKM---G 878
Query: 577 YSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFK 636
Y P+T V +D+ EEEK L+ HSEK+AL +GL+ GTT+ + KNLR+C DCH+A K
Sbjct: 879 YRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAK 938
Query: 637 LVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
L+SK+ I++RD R+HHFKNG+CSC D+W
Sbjct: 939 LISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 107/478 (22%), Positives = 206/478 (43%), Gaps = 59/478 (12%)
Query: 51 HAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENG 110
H +++KT D FV L+ Y F T A ++FD +P N+ N ++ +NG
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGF--VTDALQLFDIMPERNLVSWNSMIRVFSDNG 267
Query: 111 EPHKAISCYHKMMVLNSR----PNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDV 166
++ +MM N P+ T T+ CA + G H + VK L ++
Sbjct: 268 FSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKEL 327
Query: 167 HIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGY----------------- 209
+ +A + MY+ G A+ + + +V+ WN M+ G+
Sbjct: 328 VLNNALMDMYSKCGCITNAQMIFKMN--NNKNVVSWNTMVGGFSAEGDTHGTFDVLRQML 385
Query: 210 -----LKCGEVEAANEVFVNMPDKNVGSW-------------------NAMISGLARCGM 245
+K EV N V V + + S NA ++ A+CG
Sbjct: 386 AGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGS 445
Query: 246 IENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTV 305
+ A+ +F + + SW+A+I G+ + + +L+ QM+ + P + S+L+
Sbjct: 446 LSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSA 505
Query: 306 CANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTW 365
C+ + SL G+ +H F+ RN ++ D + +++ +Y+ CG L +F+ M+ + + +W
Sbjct: 506 CSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSW 565
Query: 366 NAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKR 425
N +I G +G + A+ +F +M + G++ + V AC+ + G
Sbjct: 566 NTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLG-----REAH 620
Query: 426 VYEIEPEMEH---FGC-VVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHG 479
Y ++ +E C ++D+ + G + ++ K + K + A W A++ IHG
Sbjct: 621 AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEK-STASWNAMIMGYGIHG 677
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 157/368 (42%), Gaps = 48/368 (13%)
Query: 87 VFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMM-VLNSRPNKFTYPTLFKACAVTG 145
VFD + N+F N + N + + + +M+ + P+ FTYP + KACA
Sbjct: 142 VFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 201
Query: 146 SVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAM 205
V G+ H VVK GL DV + +A + Y + G +A ++ D + +++ WN+M
Sbjct: 202 DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDI--MPERNLVSWNSM 259
Query: 206 I----------DGYLKCGEVEAANEVFVNMPD--------------------KNVGSW-- 233
I + +L GE+ N MPD K V W
Sbjct: 260 IRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAV 319
Query: 234 -----------NAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALE 282
NA++ ++CG I NA+ +F ++ +SW+ ++ G+ + +
Sbjct: 320 KLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFD 379
Query: 283 VFHQMQR--EKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDM 340
V QM E +K + + + VC + L + +H + + + ++ A +
Sbjct: 380 VLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVAS 439
Query: 341 YVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTF 400
Y KCG L A VF ++ + V++WNA+IGG A ++ +M P+ T
Sbjct: 440 YAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTV 499
Query: 401 VGVLNACA 408
+L+AC+
Sbjct: 500 CSLLSACS 507
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 180/439 (41%), Gaps = 58/439 (13%)
Query: 40 CFHS--LQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVF 97
CFH L LK+ H LK ++ V+ + YA + + A +VF I V
Sbjct: 405 CFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCG--SLSYAQRVFHGIRSKTVN 462
Query: 98 VCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFV 157
N + G ++ +P ++ + +M + P+ FT +L AC+ S++ G + H F+
Sbjct: 463 SWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFI 522
Query: 158 VKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEA 217
++ L D+ + + + +Y G + + D ++ WN +I GYL+ G +
Sbjct: 523 IRNWLERDLFVYLSVLSLYIHCGELCTVQALFD--AMEDKSLVSWNTVITGYLQNGFPDR 580
Query: 218 ANEVFVNM----------------------PDKNVGSWN-----------------AMIS 238
A VF M P +G ++I
Sbjct: 581 ALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLID 640
Query: 239 GLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHL 298
A+ G I + +F+ + E+ SW+A+I GY KEA+++F +MQR P
Sbjct: 641 MYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLT 700
Query: 299 LPSMLTVCANVGSLDQG-RWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVF--E 355
+LT C + G + +G R++ ++ + +IDM + G+LD A V E
Sbjct: 701 FLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEE 760
Query: 356 KMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKM-NGEKRKPNGVTFVGVLNACAHAGMVE 414
+ +V W +++ IH E K+ K+ E KP + L A
Sbjct: 761 MSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYA-------- 812
Query: 415 RGLGLFNSMKRVYEIEPEM 433
GLG + +++V + EM
Sbjct: 813 -GLGKWEDVRKVRQRMNEM 830
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 117/251 (46%), Gaps = 7/251 (2%)
Query: 236 MISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQM-QREKIKP 294
+I+ A CG +++R +FD + ++ W+A+I Y + + E LE F +M + P
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185
Query: 295 SRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVF 354
P ++ CA + + G +H V + + D +G AL+ Y G + A ++F
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 245
Query: 355 EKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKM---NGEKR-KPNGVTFVGVLNACAHA 410
+ M R + +WN+MI + +G +E++ L +M NG+ P+ T V VL CA
Sbjct: 246 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 305
Query: 411 GMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGA 470
+ G G+ ++ ++ E+ ++D+ + G + A+ I M NV W
Sbjct: 306 REIGLGKGVHGWAVKL-RLDKELVLNNALMDMYSKCGCITNAQ-MIFKMNNNKNVVSWNT 363
Query: 471 LLNACRIHGNV 481
++ G+
Sbjct: 364 MVGGFSAEGDT 374
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 130/320 (40%), Gaps = 49/320 (15%)
Query: 137 LFKACAVTGSVKEGVQFHAFVV-KQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKT 195
L +A ++ G + H V L D + + I MYA G ++R + D
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFD--ALR 147
Query: 196 QTDVICWNAMIDGYLKCGEVEAANEVFVNM-------PD--------------------- 227
++ WNA+I Y + + E F+ M PD
Sbjct: 148 SKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGL 207
Query: 228 ------------KNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQR 275
++V NA++S G + +A LFD M ER+ +SW+++I +
Sbjct: 208 AVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNG 267
Query: 276 CFKEALEVFHQMQREK----IKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDA 331
+E+ + +M E P L ++L VCA + G+ +H + + + +
Sbjct: 268 FSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKEL 327
Query: 332 VLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKM--N 389
VL AL+DMY KCG + A +F+ + V +WN M+GG + G + +M
Sbjct: 328 VLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAG 387
Query: 390 GEKRKPNGVTFVGVLNACAH 409
GE K + VT + + C H
Sbjct: 388 GEDVKADEVTILNAVPVCFH 407
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 358 bits (920), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 222/676 (32%), Positives = 364/676 (53%), Gaps = 51/676 (7%)
Query: 36 LNKKCF--HSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPR 93
L ++C S+ +K A +LK+ + +SG+ L A+ + A +VFD +
Sbjct: 71 LLRQCIDERSISGIKTIQAHMLKSGFPAE--ISGSKL-VDASLKCGDIDYARQVFDGMSE 127
Query: 94 PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQF 153
++ N + I++ +A+ Y M+ N P+++T ++FKA + KE +
Sbjct: 128 RHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRS 187
Query: 154 HAFVVKQGL-TGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKC 212
H V GL +V + SA + MY FG REA+ +LD + DV+ A+I GY +
Sbjct: 188 HGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRV--EEKDVVLITALIVGYSQK 245
Query: 213 GEVEAANEVFVNM------PD--------------KNVG-------------------SW 233
GE A + F +M P+ K++G S
Sbjct: 246 GEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQ 305
Query: 234 NAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIK 293
++++ RC +++++ +F + +++SW+++I G ++ + AL F +M R+ IK
Sbjct: 306 TSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIK 365
Query: 294 PSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEV 353
P+ L S L C+N+ ++GR IH V + D G+ LID+Y KCG DMA V
Sbjct: 366 PNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLV 425
Query: 354 FEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMV 413
F+ + +V + N MI A +G +A+ LF +M +PN VT + VL AC ++ +V
Sbjct: 426 FDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLV 485
Query: 414 ERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLN 473
E G LF+S ++ +I +H+ C+VDLLGRAG +EEAE + + + P++ +W LL+
Sbjct: 486 EEGCELFDSFRK-DKIMLTNDHYACMVDLLGRAGRLEEAE-MLTTEVINPDLVLWRTLLS 543
Query: 474 ACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETV 533
AC++H VE+ ER+ +L++EP + G L+SN+YA G+W+ V ++ MK+ ++
Sbjct: 544 ACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKN 603
Query: 534 PGSSMMDMGGKVHEFKMGDS-SHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEE 592
P S +++ + H F GD SHP ++I LE+++ K + GY + S V D+EE
Sbjct: 604 PAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQDMEETA 663
Query: 593 KETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRV 652
KE L QHSEK+A+AF + G ++ I+KNLRVC DCHS K+VS++ II RD
Sbjct: 664 KERSLHQHSEKLAIAFAVWR-NVGGSIRILKNLRVCVDCHSWIKIVSRVMKREIICRDSK 722
Query: 653 RYHHFKNGMCSCKDFW 668
R+HHF++G CSC D+W
Sbjct: 723 RFHHFRDGSCSCGDYW 738
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 109/246 (44%), Gaps = 9/246 (3%)
Query: 295 SRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVF 354
+ H +L C + S+ + I + + ++ + + G+ L+D +KCG +D A +VF
Sbjct: 64 TTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAE-ISGSKLVDASLKCGDIDYARQVF 122
Query: 355 EKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVE 414
+ M R + TWN++I L H R+++A++++ M P+ T V A + + E
Sbjct: 123 DGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSL-E 181
Query: 415 RGLGLFNSMKRVYEIEPEMEHFG-CVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLN 473
+ + + + +E G +VD+ + G EA+ ++ + K V + ++
Sbjct: 182 KEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVG 241
Query: 474 ACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVAR---VRKLMKERGI 530
+ + E + +L++ N YA ++ G D+ + LM + G
Sbjct: 242 YSQKGEDTEAVKAFQSMLVEKVQPNEYTYA---SVLISCGNLKDIGNGKLIHGLMVKSGF 298
Query: 531 ETVPGS 536
E+ S
Sbjct: 299 ESALAS 304
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 358 bits (919), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 206/662 (31%), Positives = 333/662 (50%), Gaps = 48/662 (7%)
Query: 51 HAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENG 110
H +++K V TLL+ YA + A VF +P ++ N + + +G
Sbjct: 267 HGLVVKMGFDSVVCVCNTLLRMYAGAGRS--VEANLVFKQMPTKDLISWNSLMASFVNDG 324
Query: 111 EPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKS 170
A+ M+ N T+ + AC ++G H VV GL + I +
Sbjct: 325 RSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGN 384
Query: 171 AGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNV 230
A + MY G E+R++L + + DV+ WNA+I GY + + + A F M + V
Sbjct: 385 ALVSMYGKIGEMSESRRVLLQ--MPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGV 442
Query: 231 GS----------------------------------------WNAMISGLARCGMIENAR 250
S N++I+ A+CG + +++
Sbjct: 443 SSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQ 502
Query: 251 TLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVG 310
LF+ + R+ I+W+A++ +E L++ +M+ + + L+ A +
Sbjct: 503 DLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLA 562
Query: 311 SLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIG 370
L++G+ +H + + D+ + A DMY KCG + ++ R + +WN +I
Sbjct: 563 VLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILIS 622
Query: 371 GLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIE 430
L HG E+ F +M KP VTFV +L AC+H G+V++GL ++ + R + +E
Sbjct: 623 ALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLE 682
Query: 431 PEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWI 490
P +EH CV+DLLGR+G + EAE FI MP+KPN VW +LL +C+IHGN++ G +
Sbjct: 683 PAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAEN 742
Query: 491 LLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKM 550
L +EP + Y L SN++A GRW+DV VRK M + I+ S + + KV F +
Sbjct: 743 LSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGI 802
Query: 551 GDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGL 610
GD +HPQ EIY LE + ++ GY +TS D +EE+KE L HSE++ALA+ L
Sbjct: 803 GDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYAL 862
Query: 611 LHAKPGTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGM----CSCKD 666
+ G+T+ I KNLR+C+DCHS +K VS++ G I++RD+ R+HHF+ G+ +
Sbjct: 863 MSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLFGKGSGFQQ 922
Query: 667 FW 668
FW
Sbjct: 923 FW 924
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 190/424 (44%), Gaps = 44/424 (10%)
Query: 91 IPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSV-KE 149
+P N N + G + G + + + KM L +P+ F +L AC +GS+ +E
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 150 GVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGY 209
GVQ H FV K GL DV++ +A + +Y +GL +RK+ +E +V+ W +++ GY
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE--MPDRNVVSWTSLMVGY 118
Query: 210 LKCGEVEAANEVFVNMPDKNVGS------------------------------------- 232
GE E +++ M + VG
Sbjct: 119 SDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKL 178
Query: 233 --WNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQRE 290
N++IS L G ++ A +FD+M ERD ISW++I Y + +E+ +F M+R
Sbjct: 179 AVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRF 238
Query: 291 KIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMA 350
+ + + ++L+V +V GR IH V + + L+ MY GR A
Sbjct: 239 HDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA 298
Query: 351 WEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHA 410
VF++M +++ +WN+++ GR+ DA+ L M + N VTF L AC
Sbjct: 299 NLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTP 358
Query: 411 GMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGA 470
E+G + + + V + +V + G+ G + E+ + + MP + +V W A
Sbjct: 359 DFFEKGR-ILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNA 416
Query: 471 LLNA 474
L+
Sbjct: 417 LIGG 420
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 111/475 (23%), Positives = 195/475 (41%), Gaps = 48/475 (10%)
Query: 49 QAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIE 108
Q H + K+ D +VS +L Y + + + KVF+ +P NV + G +
Sbjct: 63 QVHGFVAKSGLLSDVYVSTAILHLYGV--YGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 109 NGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHI 168
GEP + I Y M N+ + + +C + G Q VVK GL + +
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 169 KSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMP-- 226
+++ I M S G A + D+ ++ D I WN++ Y + G +E + +F M
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQ--MSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRF 238
Query: 227 -------------------------------------DKNVGSWNAMISGLARCGMIENA 249
D V N ++ A G A
Sbjct: 239 HDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA 298
Query: 250 RTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANV 309
+F +M +D ISW++++ ++ +AL + M + S L C
Sbjct: 299 NLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTP 358
Query: 310 GSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMI 369
++GR +H V + + + ++G AL+ MY K G + + V +M R+V WNA+I
Sbjct: 359 DFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALI 418
Query: 370 GGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAG-MVERGLGLFNSMKRV-Y 427
GG A + A+ F M E N +T V VL+AC G ++ERG L + +
Sbjct: 419 GGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGF 478
Query: 428 EIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVE 482
E + +++ ++ + + G + ++ + + N+ W A+L A HG+ E
Sbjct: 479 ESDEHVKN--SLITMYAKCGDLSSSQDLFNGLDNR-NIITWNAMLAANAHHGHGE 530
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 118/233 (50%), Gaps = 3/233 (1%)
Query: 256 MGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSL-DQ 314
M R+E+SW+ ++ G ++ + E +E F +M IKPS ++ S++T C GS+ +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 315 GRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAI 374
G +H FV ++ + D + TA++ +Y G + + +VFE+M R V +W +++ G +
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 375 HGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEME 434
G E+ + ++ M GE N + V+++C G + + + +E ++
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVK-SGLESKLA 179
Query: 435 HFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERV 487
++ +LG G V+ A + M + ++ W ++ A +G++E R+
Sbjct: 180 VENSLISMLGSMGNVDYANYIFDQMSERDTIS-WNSIAAAYAQNGHIEESFRI 231
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 130/353 (36%), Gaps = 71/353 (20%)
Query: 44 LQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYL 103
L+ K HA I+ D V +L+ YA + + + +F+ + N+ N L
Sbjct: 463 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCG--DLSSSQDLFNGLDNRNIITWNAML 520
Query: 104 KGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLT 163
+ +G + + KM ++F++ A A ++EG Q H VK G
Sbjct: 521 AANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFE 580
Query: 164 GDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFV 223
D I +A MY+ KCGE+ ++
Sbjct: 581 HDSFIFNAAADMYS---------------------------------KCGEIGEVVKMLP 607
Query: 224 NMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEV 283
++++ SWN +IS L R G F+E
Sbjct: 608 PSVNRSLPSWNILISALGRHGY-------------------------------FEEVCAT 636
Query: 284 FHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERN-SIQVDAVLGTALIDMYV 342
FH+M IKP S+LT C++ G +D+G + + R+ ++ +ID+
Sbjct: 637 FHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLG 696
Query: 343 KCGRLDMAWEVFEKMKVREVS-TWNAMIGGLAIHG---RAEDAMKLFTKMNGE 391
+ GRL A KM ++ W +++ IHG R A + +K+ E
Sbjct: 697 RSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPE 749
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 357 bits (917), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 201/628 (32%), Positives = 319/628 (50%), Gaps = 55/628 (8%)
Query: 84 ATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAV 143
A K+FD + N + E G KA+ + M+ +P Y TL K+
Sbjct: 137 ADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVN 196
Query: 144 TGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWN 203
++ G Q HA V++ GL + I++ + MY G A+++ D+ + V C
Sbjct: 197 PRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMA-VKKPVACTG 255
Query: 204 AMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLA---------------------- 241
M+ GY + G A ++FV++ + V W++ + +
Sbjct: 256 LMV-GYTQAGRARDALKLFVDLVTEGV-EWDSFVFSVVLKACASLEELNLGKQIHACVAK 313
Query: 242 ------------------RCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEV 283
+C E+A F E+ E +++SWSAII GY + F+EA++
Sbjct: 314 LGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKT 373
Query: 284 FHQMQREKIKP-SRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYV 342
F ++ + + S+ C+ + + G +H+ + S+ +ALI MY
Sbjct: 374 FKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYS 433
Query: 343 KCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVG 402
KCG LD A EVFE M ++ W A I G A +G A +A++LF KM KPN VTF+
Sbjct: 434 KCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIA 493
Query: 403 VLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVK 462
VL AC+HAG+VE+G ++M R Y + P ++H+ C++D+ R+GL++EA KF+++MP +
Sbjct: 494 VLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFE 553
Query: 463 PNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVR 522
P+ W L+ C H N+ELGE G L ++P ++ Y L N+Y AG+W++ A +
Sbjct: 554 PDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMM 613
Query: 523 KLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTS 582
KLM ER ++ S + GK+H F +GD HPQ +EIY L++ ++ + + N +
Sbjct: 614 KLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFDGFMEGDMFQCNMT 673
Query: 583 MVSYDIEEEEKETVLKQHSEKIALAFGLL--HAKPGTTLHIVKNLRVCADCHSAFKLVSK 640
E+ L HSE++A+AFGL+ H + + KNLR C DCH K VS
Sbjct: 674 ---------ERREQLLDHSERLAIAFGLISVHGNAPAPIKVFKNLRACPDCHEFAKHVSL 724
Query: 641 IYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
+ GH I++RD R+HHFK G CSC D+W
Sbjct: 725 VTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 146/333 (43%), Gaps = 37/333 (11%)
Query: 234 NAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIK 293
N ++ C +E+A LFDEM E + +S + +I Y +Q +A+ +F M K
Sbjct: 122 NCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDK 181
Query: 294 PSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEV 353
P + ++L N +LD GR IH+ V R + + + T +++MYVKCG L A V
Sbjct: 182 PPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRV 241
Query: 354 FEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACA----- 408
F++M V++ ++ G GRA DA+KLF + E + + F VL ACA
Sbjct: 242 FDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEEL 301
Query: 409 ------HAGMVERGL-----------------GLFNSMKRVYE--IEPEMEHFGCVVDLL 443
HA + + GL F S R ++ EP + ++
Sbjct: 302 NLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGY 361
Query: 444 GRAGLVEEAEKFIESMPVKP----NVAVWGALLNACRIHGNVELGERV--GWILLDMEPR 497
+ EEA K +S+ K N + ++ AC + + +G +V I +
Sbjct: 362 CQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGS 421
Query: 498 NSGRYALLSNIYAKAGRWDDVARVRKLMKERGI 530
G AL++ +Y+K G DD V + M I
Sbjct: 422 QYGESALIT-MYSKCGCLDDANEVFESMDNPDI 453
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 144/343 (41%), Gaps = 24/343 (6%)
Query: 32 VLDILNKKCFHSLQHL---KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVF 88
V ++ K C SL+ L KQ HA + K + V L+ Y + +F A + F
Sbjct: 287 VFSVVLKAC-ASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCS--SFESACRAF 343
Query: 89 DCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLN-SRPNKFTYPTLFKACAVTGSV 147
I PN + + G + + +A+ + + N S N FTY ++F+AC+V
Sbjct: 344 QEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADC 403
Query: 148 KEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMID 207
G Q HA +K+ L G + +SA I MY+ G +A ++ + D++ W A I
Sbjct: 404 NIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFE--SMDNPDIVAWTAFIS 461
Query: 208 GYLKCGEVEAANEVFVNMPD----KNVGSWNAMISGLARCGMIENARTLFDEMGERDEIS 263
G+ G A +F M N ++ A+++ + G++E + D M + ++
Sbjct: 462 GHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVA 521
Query: 264 -----WSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWI 318
+ +ID Y + EAL+ M E P L+ C +L+ G
Sbjct: 522 PTIDHYDCMIDIYARSGLLDEALKFMKNMPFE---PDAMSWKCFLSGCWTHKNLELGEIA 578
Query: 319 HSFVERNSIQVDAVLGTAL-IDMYVKCGRLDMAWEVFEKMKVR 360
E + + G L ++Y G+ + A E+ + M R
Sbjct: 579 GE--ELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNER 619
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 83/200 (41%), Gaps = 1/200 (0%)
Query: 273 KQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAV 332
K R EA E +M + + S + + C + SL GR +H + +
Sbjct: 60 KHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVL 119
Query: 333 LGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEK 392
L ++ MY +C L+ A ++F++M + MI A G + A+ LF+ M
Sbjct: 120 LQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASG 179
Query: 393 RKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEA 452
KP + +L + + ++ G + + R G +V++ + G + A
Sbjct: 180 DKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETG-IVNMYVKCGWLVGA 238
Query: 453 EKFIESMPVKPNVAVWGALL 472
++ + M VK VA G ++
Sbjct: 239 KRVFDQMAVKKPVACTGLMV 258
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 357 bits (915), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 177/484 (36%), Positives = 291/484 (60%), Gaps = 34/484 (7%)
Query: 84 ATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLN-SRPNKFTYPTLFKACA 142
AT++F+ + PNVF+ N ++ N I Y +++ + P++FT+P +FK+CA
Sbjct: 61 ATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCA 120
Query: 143 VTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICW 202
GS G Q H + K G + V+
Sbjct: 121 SLGSCYLGKQVHGHLCKFG---------------------------------PRFHVVTE 147
Query: 203 NAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEI 262
NA+ID Y+K ++ A++VF M +++V SWN+++SG AR G ++ A+ LF M ++ +
Sbjct: 148 NALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIV 207
Query: 263 SWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFV 322
SW+A+I GY C+ EA++ F +MQ I+P L S+L CA +GSL+ G+WIH +
Sbjct: 208 SWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYA 267
Query: 323 ERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAM 382
ER + ALI+MY KCG + A ++F +M+ ++V +W+ MI G A HG A A+
Sbjct: 268 ERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAI 327
Query: 383 KLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDL 442
+ F +M K KPNG+TF+G+L+AC+H GM + GL F+ M++ Y+IEP++EH+GC++D+
Sbjct: 328 ETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDV 387
Query: 443 LGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRY 502
L RAG +E A + ++MP+KP+ +WG+LL++CR GN+++ L+++EP + G Y
Sbjct: 388 LARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNY 447
Query: 503 ALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIY 562
LL+NIYA G+W+DV+R+RK+++ ++ PG S++++ V EF GD+S P EI
Sbjct: 448 VLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEIS 507
Query: 563 LMLE 566
++L+
Sbjct: 508 IVLQ 511
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 156/365 (42%), Gaps = 72/365 (19%)
Query: 243 CGMIEN---ARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIK-PSRHL 298
C IE+ A LF+++ + +++II Y + + + ++ Q+ R+ + P R
Sbjct: 52 CDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFT 111
Query: 299 LPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMK 358
P M CA++GS G+ +H + + + V ALIDMY+K L A +VF++M
Sbjct: 112 FPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMY 171
Query: 359 VREVSTWNAMIGGLAIHGRAE-------------------------------DAMKLFTK 387
R+V +WN+++ G A G+ + +AM F +
Sbjct: 172 ERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFRE 231
Query: 388 MNGEKRKPNGVTFVGVLNACAHAGMVERG---------------LGLFNSMKRVYE---- 428
M +P+ ++ + VL +CA G +E G G+ N++ +Y
Sbjct: 232 MQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGV 291
Query: 429 IEPEMEHFGCV--VDLLGRAGLVE------EAEKFIESM------PVKPNVAVWGALLNA 474
I ++ FG + D++ + ++ A IE+ VKPN + LL+A
Sbjct: 292 ISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSA 351
Query: 475 CRIHGNVELGERVGWIL---LDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIE 531
C G + G R ++ +EP+ Y L ++ A+AG+ + + K M +
Sbjct: 352 CSHVGMWQEGLRYFDMMRQDYQIEPKIE-HYGCLIDVLARAGKLERAVEITKTMPMKPDS 410
Query: 532 TVPGS 536
+ GS
Sbjct: 411 KIWGS 415
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 122/307 (39%), Gaps = 49/307 (15%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSI 107
KQ H + K L+ Y F++ A KVFD + +V N L G
Sbjct: 129 KQVHGHLCKFGPRFHVVTENALIDMYMK--FDDLVDAHKVFDEMYERDVISWNSLLSGYA 186
Query: 108 ENGEPHKA------------------------ISCY-------HKMMVLNSRPNKFTYPT 136
G+ KA I CY +M + P++ + +
Sbjct: 187 RLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLIS 246
Query: 137 LFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDE-SGKT 195
+ +CA GS++ G H + ++G + +A I+MY+ G+ +A ++ + GK
Sbjct: 247 VLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGK- 305
Query: 196 QTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVG----SWNAMISGLARCGMIENART 251
DVI W+ MI GY G A E F M V ++ ++S + GM +
Sbjct: 306 --DVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLR 363
Query: 252 LFDEMGERDEIS-----WSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVC 306
FD M + +I + +ID + + A+E+ M +KP + S+L+ C
Sbjct: 364 YFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTM---PMKPDSKIWGSLLSSC 420
Query: 307 ANVGSLD 313
G+LD
Sbjct: 421 RTPGNLD 427
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 353 bits (907), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 195/539 (36%), Positives = 302/539 (56%), Gaps = 42/539 (7%)
Query: 42 HSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNI 101
++L+ LKQ+H ++ T D+ ++ A N + A VF P PN ++ N
Sbjct: 26 NNLKTLKQSHCYMIITGLNRDNLNVAKFIE--ACSNAGHLRYAYSVFTHQPCPNTYLHNT 83
Query: 102 YLKGSIENGEPHK---AISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVV 158
++ EP+ AI+ Y K+ L ++P+ FT+P + K V G Q H VV
Sbjct: 84 MIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVV 143
Query: 159 KQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAA 218
G VH+ + IQMY S CG + A
Sbjct: 144 VFGFDSSVHVVTGLIQMYFS---------------------------------CGGLGDA 170
Query: 219 NEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMG--ERDEISWSAIIDGYIKQRC 276
++F M K+V WNA+++G + G ++ AR+L + M R+E+SW+ +I GY K
Sbjct: 171 RKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGR 230
Query: 277 FKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTA 336
EA+EVF +M E ++P L ++L+ CA++GSL+ G I S+V+ + L A
Sbjct: 231 ASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNA 290
Query: 337 LIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPN 396
+IDMY K G + A +VFE + R V TW +I GLA HG +A+ +F +M +PN
Sbjct: 291 VIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPN 350
Query: 397 GVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFI 456
VTF+ +L+AC+H G V+ G LFNSM+ Y I P +EH+GC++DLLGRAG + EA++ I
Sbjct: 351 DVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVI 410
Query: 457 ESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWD 516
+SMP K N A+WG+LL A +H ++ELGER L+ +EP NSG Y LL+N+Y+ GRWD
Sbjct: 411 KSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWD 470
Query: 517 DVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIE 575
+ +R +MK G++ + G S +++ +V++F GD +HPQ++ I+ +L++M LQI+
Sbjct: 471 ESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQEM--DLQIQ 527
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 353 bits (906), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 189/533 (35%), Positives = 299/533 (56%), Gaps = 40/533 (7%)
Query: 49 QAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIE 108
Q H++I K+ D ++ L+ Y+ N A +VFD + NV N + +
Sbjct: 173 QVHSLIAKSPFLSDVYIGSALVDMYSKCG--NVNDAQRVFDEMGDRNVVSWNSLITCFEQ 230
Query: 109 NGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHI 168
NG +A+ + M+ P++ T ++ ACA ++K G + H VVK
Sbjct: 231 NGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVK--------- 281
Query: 169 KSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDK 228
+ K + D+I NA +D Y KC ++ A +F +MP +
Sbjct: 282 -----------------------NDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
Query: 229 NVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQ 288
NV + +MISG A + AR +F +M ER+ +SW+A+I GY + +EAL +F ++
Sbjct: 319 NVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLK 378
Query: 289 REKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQV------DAVLGTALIDMYV 342
RE + P+ + ++L CA++ L G H V ++ + D +G +LIDMYV
Sbjct: 379 RESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYV 438
Query: 343 KCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVG 402
KCG ++ + VF KM R+ +WNAMI G A +G +A++LF +M KP+ +T +G
Sbjct: 439 KCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIG 498
Query: 403 VLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVK 462
VL+AC HAG VE G F+SM R + + P +H+ C+VDLLGRAG +EEA+ IE MP++
Sbjct: 499 VLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQ 558
Query: 463 PNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVR 522
P+ +WG+LL AC++H N+ LG+ V LL++EP NSG Y LLSN+YA+ G+W+DV VR
Sbjct: 559 PDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVR 618
Query: 523 KLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIE 575
K M++ G+ PG S + + G H F + D SHP+ K+I+ +L+ ++ +++ E
Sbjct: 619 KSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPE 671
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 154/270 (57%)
Query: 197 TDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEM 256
++ N +ID Y KCG +E +VF MP +N+ +WN++++GL + G ++ A +LF M
Sbjct: 53 NEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSM 112
Query: 257 GERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGR 316
ERD+ +W++++ G+ + +EAL F M +E + + S+L+ C+ + +++G
Sbjct: 113 PERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGV 172
Query: 317 WIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHG 376
+HS + ++ D +G+AL+DMY KCG ++ A VF++M R V +WN++I +G
Sbjct: 173 QVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNG 232
Query: 377 RAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHF 436
A +A+ +F M + +P+ VT V++ACA ++ G + + + ++ ++
Sbjct: 233 PAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILS 292
Query: 437 GCVVDLLGRAGLVEEAEKFIESMPVKPNVA 466
VD+ + ++EA +SMP++ +A
Sbjct: 293 NAFVDMYAKCSRIKEARFIFDSMPIRNVIA 322
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 86/195 (44%), Gaps = 33/195 (16%)
Query: 316 RWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREV------------- 362
R++H+ V ++ + + LID Y KCG L+ +VF+KM R +
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 363 ------------------STWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVL 404
TWN+M+ G A H R E+A+ F M+ E N +F VL
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 405 NACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPN 464
+AC+ + +G+ + +S+ ++ +VD+ + G V +A++ + M + N
Sbjct: 160 SACSGLNDMNKGVQV-HSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDR-N 217
Query: 465 VAVWGALLNACRIHG 479
V W +L+ +G
Sbjct: 218 VVSWNSLITCFEQNG 232
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 346 bits (888), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 185/526 (35%), Positives = 297/526 (56%), Gaps = 44/526 (8%)
Query: 185 ARKMLDESGKTQTDVICWNAMIDGYL------KCGEVEA----------ANEV-FVNMPD 227
A K+ DE + D++ WN++I GY KC EV + NEV F++M
Sbjct: 85 AEKLFDE--MPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMIS 142
Query: 228 ------------------------KNVGSWNAMISGLARCGMIENARTLFDEMGERDEIS 263
+ V NA I+ + G + ++ LF+++ ++ +S
Sbjct: 143 ACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVS 202
Query: 264 WSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVE 323
W+ +I +++ ++ L F+ +R +P + ++L C ++G + + IH +
Sbjct: 203 WNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIM 262
Query: 324 RNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMK 383
+ + TAL+D+Y K GRL+ + VF ++ + W AM+ A HG DA+K
Sbjct: 263 FGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIK 322
Query: 384 LFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLL 443
F M P+ VTF +LNAC+H+G+VE G F +M + Y I+P ++H+ C+VDLL
Sbjct: 323 HFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLL 382
Query: 444 GRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYA 503
GR+GL+++A I+ MP++P+ VWGALL ACR++ + +LG + L ++EPR+ Y
Sbjct: 383 GRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYV 442
Query: 504 LLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYL 563
+LSNIY+ +G W D +R+R LMK++G+ G S ++ G K+H+F +GD SHP+ ++I
Sbjct: 443 MLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQK 502
Query: 564 MLEKMMDKLQIE-GYSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLHIV 622
L+++ K++ E GY T V +D+ E+ KE ++ QHSEKIA+AFGLL P + I
Sbjct: 503 KLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIR 562
Query: 623 KNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
KNLR+C DCH K +S I II+RD R+HHF +G CSC D+W
Sbjct: 563 KNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/432 (21%), Positives = 185/432 (42%), Gaps = 51/432 (11%)
Query: 38 KKCFHSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVF 97
K C S++ + H ++K+ + F+ L+ CY + A K+FD +P ++
Sbjct: 42 KSCV-SIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHD--VCAEKLFDEMPERDLV 98
Query: 98 VCNIYLKGSIENGEPHKAISCYHKMMV--LNSRPNKFTYPTLFKACAVTGSVKEGVQFHA 155
N + G G K +MM+ + RPN+ T+ ++ AC GS +EG H
Sbjct: 99 SWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHG 158
Query: 156 FVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEV 215
V+K G+ +V + +A I Y G + K+ ++ + +++ WN MI +L+ G
Sbjct: 159 LVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFED--LSIKNLVSWNTMIVIHLQNGLA 216
Query: 216 EAANEVFVNM-------PDK---------------------------------NVGSWNA 235
E F NM PD+ N A
Sbjct: 217 EKGLAYF-NMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTA 275
Query: 236 MISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPS 295
++ ++ G +E++ T+F E+ D ++W+A++ Y ++A++ F M I P
Sbjct: 276 LLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPD 335
Query: 296 RHLLPSMLTVCANVGSLDQGR-WIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVF 354
+L C++ G +++G+ + + +R I + ++D+ + G L A+ +
Sbjct: 336 HVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLI 395
Query: 355 EKMKVREVS-TWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMV 413
++M + S W A++G ++ + K ++ E +G +V + N + +G+
Sbjct: 396 KEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLF-ELEPRDGRNYVMLSNIYSASGLW 454
Query: 414 ERGLGLFNSMKR 425
+ + N MK+
Sbjct: 455 KDASRIRNLMKQ 466
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 342 bits (878), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 198/585 (33%), Positives = 301/585 (51%), Gaps = 17/585 (2%)
Query: 95 NVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFH 154
+VF + G I NG ++A+ + KM + PN T + AC+ + +G + H
Sbjct: 316 DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVH 375
Query: 155 AFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGE 214
+ VK G DV + ++ + MY+ G +ARK+ D DV WN+MI GY + G
Sbjct: 376 SIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSV--KNKDVYTWNSMITGYCQAGY 433
Query: 215 VEAANEVFVNMPDKN----VGSWNAMISGLARCGMIENARTLFDEMG-----ERDEISWS 265
A E+F M D N + +WN MISG + G A LF M +R+ +W+
Sbjct: 434 CGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWN 493
Query: 266 AIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERN 325
II GYI+ EALE+F +MQ + P+ + S+L CAN+ R IH V R
Sbjct: 494 LIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRR 553
Query: 326 SIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLF 385
++ + AL D Y K G ++ + +F M+ +++ TWN++IGG +HG A+ LF
Sbjct: 554 NLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALF 613
Query: 386 TKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGR 445
+M + PN T ++ A G V+ G +F S+ Y I P +EH +V L GR
Sbjct: 614 NQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGR 673
Query: 446 AGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALL 505
A +EEA +FI+ M ++ +W + L CRIHG++++ L +EP N+ +++
Sbjct: 674 ANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIV 733
Query: 506 SNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLML 565
S IYA + K ++ ++ G S +++ +H F GD S +Y ++
Sbjct: 734 SQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLV 793
Query: 566 EKMMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPG--TTLHIVK 623
EK M +L N + IEEE +E HSEK A+AFGL+ + TT+ I+K
Sbjct: 794 EK-MSRLDNRSDQYNGELW---IEEEGREETCGIHSEKFAMAFGLISSSGASKTTIRILK 849
Query: 624 NLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
NLR+C DCH K VSK YG +I++ D HHFKNG CSCKD+W
Sbjct: 850 NLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDCSCKDYW 894
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 134/537 (24%), Positives = 249/537 (46%), Gaps = 34/537 (6%)
Query: 62 DHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHK 121
D FV LL YA A KVFD + N+F + + + +
Sbjct: 114 DVFVETKLLSMYAKCGC--IADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRL 171
Query: 122 MMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGL 181
MM P+ F +P + + CA G V+ G H+ V+K G++ + + ++ + +YA G
Sbjct: 172 MMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGE 231
Query: 182 FREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVG----SWNAMI 237
A K + DVI WN+++ Y + G+ E A E+ M + + +WN +I
Sbjct: 232 LDFATKFFRR--MRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILI 289
Query: 238 SGLARCGMIENARTLFDEMG----ERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIK 293
G + G + A L +M D +W+A+I G I +AL++F +M +
Sbjct: 290 GGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVV 349
Query: 294 PSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEV 353
P+ + S ++ C+ + ++QG +HS + D ++G +L+DMY KCG+L+ A +V
Sbjct: 350 PNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKV 409
Query: 354 FEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMV 413
F+ +K ++V TWN+MI G G A +LFT+M +PN +T+ +++ G
Sbjct: 410 FDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDE 469
Query: 414 ERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVK---PNVAVWGA 470
+ LF M++ +++ + ++ + G +EA + M PN +
Sbjct: 470 GEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILS 529
Query: 471 LLNAC-RIHGNVELGERVGWIL-LDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKER 528
LL AC + G + E G +L +++ ++ + A L++ YAK+G D+ R +
Sbjct: 530 LLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNA-LTDTYAKSG---DIEYSRTIF--L 583
Query: 529 GIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVS 585
G+ET ++ + + + S P + + ++++ +G +PN +S
Sbjct: 584 GMET---KDIITWNSLIGGYVLHGSYGPAL--------ALFNQMKTQGITPNRGTLS 629
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 186/397 (46%), Gaps = 30/397 (7%)
Query: 180 GLFREARKMLD---ESG---KTQTDVICWNAMID-GYLKCGEVEAANEVFVNMPDKNVGS 232
G EA K LD + G K T + + ID G + G + A PD V +
Sbjct: 60 GSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTEPDVFVET 119
Query: 233 WNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKI 292
++S A+CG I +AR +FD M ER+ +WSA+I Y ++ ++E ++F M ++ +
Sbjct: 120 --KLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGV 177
Query: 293 KPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWE 352
P L P +L CAN G ++ G+ IHS V + + + +++ +Y KCG LD A +
Sbjct: 178 LPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATK 237
Query: 353 VFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGM 412
F +M+ R+V WN+++ +G+ E+A++L +M E P VT+ ++ G
Sbjct: 238 FFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGK 297
Query: 413 VERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESM---PVKPNVAVWG 469
+ + L M+ + I ++ + ++ L G+ +A M V PN
Sbjct: 298 CDAAMDLMQKME-TFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIM 356
Query: 470 ALLNACRIHGNVELGERVGWILL------DMEPRNSGRYALLSNIYAKAGRWDDVARVRK 523
+ ++AC + G V I + D+ NS L ++Y+K G+ +D +V
Sbjct: 357 SAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNS-----LVDMYSKCGKLEDARKVFD 411
Query: 524 LMKERGIET----VPGSSMMDMGGKVHEF--KMGDSS 554
+K + + T + G GK +E +M D++
Sbjct: 412 SVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDAN 448
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 171/417 (41%), Gaps = 99/417 (23%)
Query: 109 NGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGL--TGDV 166
NG +A + S+ + TY L ++C +GS+ G HA + GL DV
Sbjct: 59 NGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA---RFGLFTEPDV 115
Query: 167 HIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLK--------------- 211
+++ + MYA G +ARK+ D + ++ W+AMI Y +
Sbjct: 116 FVETKLLSMYAKCGCIADARKVFD--SMRERNLFTWSAMIGAYSRENRWREVAKLFRLMM 173
Query: 212 --------------------CGEVEAANEVFVNMPDKNVGSW----NAMISGLARCGMIE 247
CG+VEA + + + S N++++ A+CG ++
Sbjct: 174 KDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELD 233
Query: 248 NARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCA 307
A F M ERD I+W++++ Y + +EA+E+ +M++E I P
Sbjct: 234 FATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPG------------ 281
Query: 308 NVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMK----VREVS 363
V LI Y + G+ D A ++ +KM+ +V
Sbjct: 282 -----------------------LVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVF 318
Query: 364 TWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSM 423
TW AMI GL +G A+ +F KM PN VT + ++AC+ ++ +G
Sbjct: 319 TWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQG------- 371
Query: 424 KRVYEIEPEMEHF------GCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNA 474
V+ I +M +VD+ + G +E+A K +S+ K +V W +++
Sbjct: 372 SEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK-DVYTWNSMITG 427
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 340 bits (873), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 186/569 (32%), Positives = 305/569 (53%), Gaps = 42/569 (7%)
Query: 11 GLKPIELSSDQAPSSKLSQKTVLDILNKKCFHS--LQHLKQAHAIILKTAHFHDHFVSGT 68
G + + S APSS ++++ + ++ S L HLKQ + ++ + H HF+
Sbjct: 2 GTRVTQFSYLHAPSSHMAEQLLNQFISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFK 61
Query: 69 LLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAIS-CYHKMMVLNS 127
LL+ + N + A +FD PN + L + H + + + ++MV S
Sbjct: 62 LLR-FCTLRLCNLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRS 120
Query: 128 --RPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREA 185
RPN F YP + K+ S H + K G V +++A + YAS
Sbjct: 121 VPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYAS------- 173
Query: 186 RKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGM 245
+ A ++F M ++NV SW AM+SG AR G
Sbjct: 174 -------------------------SVSHITLARQLFDEMSERNVVSWTAMLSGYARSGD 208
Query: 246 IENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQRE-KIKPSRHLLPSMLT 304
I NA LF++M ERD SW+AI+ + F EA+ +F +M E I+P+ + +L+
Sbjct: 209 ISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLS 268
Query: 305 VCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVST 364
CA G+L + IH+F R + D + +L+D+Y KCG L+ A VF+ + ++
Sbjct: 269 ACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTA 328
Query: 365 WNAMIGGLAIHGRAEDAMKLF---TKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFN 421
WN+MI A+HGR+E+A+ +F K+N KP+ +TF+G+LNAC H G+V +G G F+
Sbjct: 329 WNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFD 388
Query: 422 SMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNV 481
M + IEP +EH+GC++DLLGRAG +EA + + +M +K + A+WG+LLNAC+IHG++
Sbjct: 389 LMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHL 448
Query: 482 ELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDM 541
+L E L+ + P N G A+++N+Y + G W++ R RK++K + PG S +++
Sbjct: 449 DLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEI 508
Query: 542 GGKVHEFKMGDSSHPQMKEIYLMLEKMMD 570
+VH+F D SHP+ +EIY++L+ ++
Sbjct: 509 DNEVHQFYSLDKSHPETEEIYMILDSLIS 537
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 340 bits (872), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 211/664 (31%), Positives = 333/664 (50%), Gaps = 82/664 (12%)
Query: 16 ELSSDQAPSSKLSQKTVLDILNKKCFHSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYAN 75
E+ SD ++ + +VL + L +Q H +KT D V LL YA
Sbjct: 115 EMQSDGIKPNEYTLGSVLRMCTSLVL--LLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQ 172
Query: 76 PNFNNFTLATKVFDCIP-RPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTY 134
+ A +F+ + N L G +NG KAI C+ + ++ N++T+
Sbjct: 173 CK--RISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTF 230
Query: 135 PTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGK 194
P++ ACA + + GVQ H +VK G +++++SA I MYA AR +L+ G
Sbjct: 231 PSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLE--GM 288
Query: 195 TQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNV------------------------ 230
DV+ WN+MI G ++ G + A +F M ++++
Sbjct: 289 EVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIA 348
Query: 231 ------------GSW----NAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQ 274
++ NA++ A+ G++++A +F+ M E+D ISW+A++ G
Sbjct: 349 SSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHN 408
Query: 275 RCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLG 334
+ EAL++F M+ I P + + S+L+ A + L+ G+ +H ++ +
Sbjct: 409 GSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVN 468
Query: 335 TALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRK 394
+L+ MY KCG L+ A +F M++R++ TW +I G A +G EDA +
Sbjct: 469 NSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRY---------- 518
Query: 395 PNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEK 454
F+SM+ VY I P EH+ C++DL GR+G + E+
Sbjct: 519 -------------------------FDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQ 553
Query: 455 FIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGR 514
+ M V+P+ VW A+L A R HGN+E GER L+++EP N+ Y LSN+Y+ AGR
Sbjct: 554 LLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGR 613
Query: 515 WDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQI 574
D+ A VR+LMK R I PG S ++ GKVH F D HP+M EIY +++MM ++
Sbjct: 614 QDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKE 673
Query: 575 EGYSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSA 634
GY + S +D+++E KE L HSEK+A+AFGLL G + I+KNLRVC DCHSA
Sbjct: 674 AGYFADMSFALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSGAPIRIIKNLRVCGDCHSA 733
Query: 635 FKLV 638
KL+
Sbjct: 734 MKLL 737
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 139/279 (49%), Gaps = 5/279 (1%)
Query: 203 NAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEI 262
N ++ K G V+ A ++F MP+++ +WN MI + + +A LF ++ I
Sbjct: 32 NLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTI 91
Query: 263 SWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFV 322
SW+A+I GY K EA +F +MQ + IKP+ + L S+L +C ++ L +G IH
Sbjct: 92 SWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHT 151
Query: 323 ERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVS-TWNAMIGGLAIHGRAEDA 381
+ +D + L+ MY +C R+ A +FE M+ + + TW +M+ G + +G A A
Sbjct: 152 IKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKA 211
Query: 382 MKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSM-KRVYEIEPEMEHFGCVV 440
++ F + E + N TF VL ACA G+ + + K ++ ++ ++
Sbjct: 212 IECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQ--SALI 269
Query: 441 DLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHG 479
D+ + +E A +E M V +V W +++ C G
Sbjct: 270 DMYAKCREMESARALLEGMEVD-DVVSWNSMIVGCVRQG 307
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 339 bits (870), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 193/547 (35%), Positives = 302/547 (55%), Gaps = 43/547 (7%)
Query: 24 SSKLSQKTVLDILNKKCFHSLQHLKQAHAIILKTAHFHDH-FVSGTLLKCYANPNFNNFT 82
SS L K+ IL +C S+ L + H +++ + FVS TL A + +
Sbjct: 5 SSSLVAKS---ILRHQC-KSMSELYKIHTLLITLGLSEEEPFVSQTL-SFSALSSSGDVD 59
Query: 83 LATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACA 142
A K + P + N ++G + P K+IS Y +M+ P+ TYP L K+ +
Sbjct: 60 YAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSS 119
Query: 143 VTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICW 202
+ K G H VVK GL D+ I + I MY SF ARK+ DE
Sbjct: 120 RLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDE----------- 168
Query: 203 NAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEI 262
MP KN+ +WN+++ A+ G + +AR +FDEM ERD +
Sbjct: 169 ----------------------MPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVV 206
Query: 263 SWSAIIDGYIKQRCFKEALEVFHQMQR-EKIKPSRHLLPSMLTVCANVGSLDQGRWIHSF 321
+WS++IDGY+K+ + +ALE+F QM R K + + S++ CA++G+L++G+ +H +
Sbjct: 207 TWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRY 266
Query: 322 VERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVST--WNAMIGGLAIHGRAE 379
+ + + +L T+LIDMY KCG + AW VF + V+E WNA+IGGLA HG
Sbjct: 267 ILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIR 326
Query: 380 DAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCV 439
++++LF KM K P+ +TF+ +L AC+H G+V+ F S+K EP+ EH+ C+
Sbjct: 327 ESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES-GAEPKSEHYACM 385
Query: 440 VDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNS 499
VD+L RAGLV++A FI MP+KP ++ GALLN C HGN+EL E VG L++++P N
Sbjct: 386 VDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHND 445
Query: 500 GRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMK 559
GRY L+N+YA ++ +R+ M+++G++ + G S++D+ G H F D +H
Sbjct: 446 GRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSD 505
Query: 560 EIYLMLE 566
+IY +L+
Sbjct: 506 KIYAVLQ 512
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 338 bits (868), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 188/554 (33%), Positives = 306/554 (55%), Gaps = 44/554 (7%)
Query: 27 LSQKTVLDILNKKCFHSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYA-NPNFNNFTLAT 85
L +K+VL L +C SL+ KQ ++ D + ++ + +F +++ +
Sbjct: 3 LPEKSVLLELISRC-SSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYS-SV 60
Query: 86 KVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTG 145
+ + F N L +P I Y + P+ FT+P +FKAC
Sbjct: 61 ILHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFS 120
Query: 146 SVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAM 205
++EG Q H V K G D++++++ + Y G R A K+ E DV+ W +
Sbjct: 121 GIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGE--MPVRDVVSWTGI 178
Query: 206 IDGYLKCGEVEAANEVFVNMP-DKNVGSW------------------------------- 233
I G+ + G + A + F M + N+ ++
Sbjct: 179 ITGFTRTGLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLIS 238
Query: 234 ----NAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQR 289
NA+I +C + +A +F E+ ++D++SW+++I G + KEA+++F MQ
Sbjct: 239 LETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQT 298
Query: 290 EK-IKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLD 348
IKP H+L S+L+ CA++G++D GRW+H ++ I+ D +GTA++DMY KCG ++
Sbjct: 299 SSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIE 358
Query: 349 MAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACA 408
A E+F ++ + V TWNA++GGLAIHG ++++ F +M KPN VTF+ LNAC
Sbjct: 359 TALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACC 418
Query: 409 HAGMVERGLGLFNSMK-RVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAV 467
H G+V+ G F+ MK R Y + P++EH+GC++DLL RAGL++EA + +++MPVKP+V +
Sbjct: 419 HTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRI 478
Query: 468 WGALLNACRIHGNV-ELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMK 526
GA+L+AC+ G + EL + + LD+E +SG Y LLSNI+A RWDDVAR+R+LMK
Sbjct: 479 CGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMK 538
Query: 527 ERGIETVPGSSMMD 540
+GI VPGSS ++
Sbjct: 539 VKGISKVPGSSYIE 552
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 338 bits (868), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 192/543 (35%), Positives = 286/543 (52%), Gaps = 66/543 (12%)
Query: 70 LKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRP 129
L +A F+ + + + F + P F+ N +K +P +A+ M+
Sbjct: 62 LADFARCVFHEYHVCSFSFGEVEDP--FLWNAVIKSHSHGKDPRQALLLLCLMLENGVSV 119
Query: 130 NKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMY------------- 176
+KF+ + KAC+ G VK G+Q H F+ K GL D+ +++ I +Y
Sbjct: 120 DKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMF 179
Query: 177 ------------------ASFGLFREARKMLDE---------------SGKTQT------ 197
GL AR++ D SG QT
Sbjct: 180 DRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDI 239
Query: 198 -----------DVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMI 246
D+I WN+MIDGY+K G +E A +F MP ++V +W MI G A+ G +
Sbjct: 240 ASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFV 299
Query: 247 ENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREK-IKPSRHLLPSMLTV 305
+A+TLFD+M RD +++++++ GY++ + EALE+F M++E + P L +L
Sbjct: 300 HHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPA 359
Query: 306 CANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTW 365
A +G L + +H ++ + LG ALIDMY KCG + A VFE ++ + + W
Sbjct: 360 IAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHW 419
Query: 366 NAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKR 425
NAMIGGLAIHG E A + ++ KP+ +TFVGVLNAC+H+G+V+ GL F M+R
Sbjct: 420 NAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRR 479
Query: 426 VYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGE 485
++IEP ++H+GC+VD+L R+G +E A+ IE MPV+PN +W L AC H E GE
Sbjct: 480 KHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGE 539
Query: 486 RVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKV 545
V L+ N Y LLSN+YA G W DV RVR +MKER IE +PG S +++ G+V
Sbjct: 540 LVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRV 599
Query: 546 HEF 548
HEF
Sbjct: 600 HEF 602
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 338 bits (867), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 187/526 (35%), Positives = 297/526 (56%), Gaps = 42/526 (7%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSI 107
++ H +K D +VS +L+ YA+ + KVFD +P+ +V N + +
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYAS--LGKIEITHKVFDEMPQRDVVSWNGLISSYV 123
Query: 108 ENGEPHKAISCYHKM-MVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDV 166
NG AI + +M N + ++ T + AC+ +++ G + + FVV +
Sbjct: 124 GNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE------ 177
Query: 167 HIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMP 226
+M G NA++D + KCG ++ A VF +M
Sbjct: 178 ------FEMSVRIG----------------------NALVDMFCKCGCLDKARAVFDSMR 209
Query: 227 DKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQ 286
DKNV W +M+ G G I+ AR LF+ +D + W+A+++GY++ F EALE+F
Sbjct: 210 DKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRC 269
Query: 287 MQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGR 346
MQ I+P +L S+LT CA G+L+QG+WIH ++ N + VD V+GTAL+DMY KCG
Sbjct: 270 MQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGC 329
Query: 347 LDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNA 406
++ A EVF ++K R+ ++W ++I GLA++G + A+ L+ +M + + +TFV VL A
Sbjct: 330 IETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTA 389
Query: 407 CAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPN-- 464
C H G V G +F+SM + ++P+ EH C++DLL RAGL++EAE+ I+ M + +
Sbjct: 390 CNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDET 449
Query: 465 -VAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRK 523
V V+ +LL+A R +GNV++ ERV L +E +S + LL+++YA A RW+DV VR+
Sbjct: 450 LVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRR 509
Query: 524 LMKERGIETVPGSSMMDMGGKVHEFKMGDS--SHPQMKEIYLMLEK 567
MK+ GI PG S +++ G HEF +GD SHP+M EI ML +
Sbjct: 510 KMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSMLHQ 555
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 159/327 (48%), Gaps = 16/327 (4%)
Query: 275 RCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLG 334
+ F + L +F +++ + + P LP +L + + +G +H + + ++ D+ +
Sbjct: 25 KSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVS 84
Query: 335 TALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKR- 393
+L+ MY G++++ +VF++M R+V +WN +I +GR EDA+ +F +M+ E
Sbjct: 85 NSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNL 144
Query: 394 KPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAE 453
K + T V L+AC+ +E G ++ + V E E + +VD+ + G +++A
Sbjct: 145 KFDEGTIVSTLSACSALKNLEIGERIYRFV--VTEFEMSVRIGNALVDMFCKCGCLDKAR 202
Query: 454 KFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEP-RNSGRYALLSNIYAKA 512
+SM K NV W +++ G ++ +L + P ++ + + N Y +
Sbjct: 203 AVFDSMRDK-NVKCWTSMVFGYVSTGRIDEAR----VLFERSPVKDVVLWTAMMNGYVQF 257
Query: 513 GRWDDVARVRKLMKERGI--ETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMD 570
R+D+ + + M+ GI + S++ + + G H + E + ++K++
Sbjct: 258 NRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVG 317
Query: 571 KLQIEGYSP----NTSM-VSYDIEEEE 592
++ Y+ T++ V Y+I+E +
Sbjct: 318 TALVDMYAKCGCIETALEVFYEIKERD 344
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 338 bits (866), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 190/571 (33%), Positives = 318/571 (55%), Gaps = 42/571 (7%)
Query: 137 LFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQ 196
L + A T S +G+Q H +VVK GL+ + + I Y+ L ++R+ ++S +
Sbjct: 21 LLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKS 80
Query: 197 T------------DVICWNAMIDGYLK---CGEVEAANEVFVNMP--------------- 226
+ + + W ++ +LK G + + V +
Sbjct: 81 STTWSSIISCFAQNELPWMSL--EFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSV 138
Query: 227 ---------DKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCF 277
D +V ++++ A+CG I AR +FDEM +R+ ++WS ++ GY +
Sbjct: 139 HCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGEN 198
Query: 278 KEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTAL 337
+EAL +F + E + + + S+++VCAN L+ GR IH ++S + +G++L
Sbjct: 199 EEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSL 258
Query: 338 IDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNG 397
+ +Y KCG + A++VF ++ V+ + WNAM+ A H + ++LF +M KPN
Sbjct: 259 VSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNF 318
Query: 398 VTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIE 457
+TF+ VLNAC+HAG+V+ G F+ MK IEP +H+ +VD+LGRAG ++EA + I
Sbjct: 319 ITFLNVLNACSHAGLVDEGRYYFDQMKES-RIEPTDKHYASLVDMLGRAGRLQEALEVIT 377
Query: 458 SMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDD 517
+MP+ P +VWGALL +C +H N EL + ++ P +SG + LSN YA GR++D
Sbjct: 378 NMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFED 437
Query: 518 VARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGY 577
A+ RKL+++RG + G S ++ KVH F G+ H + KEIY L ++ ++++ GY
Sbjct: 438 AAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGY 497
Query: 578 SPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFKL 637
+TS V +++ +EK ++ HSE++A+AFGL+ + ++KNLRVC DCH+A K
Sbjct: 498 IADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKF 557
Query: 638 VSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
+S II+RD R+H F++G CSC D+W
Sbjct: 558 MSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 144/314 (45%), Gaps = 42/314 (13%)
Query: 108 ENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVH 167
+N P ++ KMM N RP+ P+ K+CA+ G H +K G DV
Sbjct: 93 QNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVF 152
Query: 168 IKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPD 227
+ S+ + MYA G ARKM DE Q +V+ W+ M+ GY + GE E A +F
Sbjct: 153 VGSSLVDMYAKCGEIVYARKMFDE--MPQRNVVTWSGMMYGYAQMGENEEALWLFKEALF 210
Query: 228 KNVG----SWNAMIS---------------GL--------------------ARCGMIEN 248
+N+ S++++IS GL ++CG+ E
Sbjct: 211 ENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEG 270
Query: 249 ARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCAN 308
A +F+E+ ++ W+A++ Y + ++ +E+F +M+ +KP+ ++L C++
Sbjct: 271 AYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSH 330
Query: 309 VGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREV-STWNA 367
G +D+GR+ ++ + I+ +L+DM + GRL A EV M + S W A
Sbjct: 331 AGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGA 390
Query: 368 MIGGLAIHGRAEDA 381
++ +H E A
Sbjct: 391 LLTSCTVHKNTELA 404
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 166/410 (40%), Gaps = 61/410 (14%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSI 107
+ H + +KT + D FV +L+ YA A K+FD +P+ NV + + G
Sbjct: 136 RSVHCLSMKTGYDADVFVGSSLVDMYA--KCGEIVYARKMFDEMPQRNVVTWSGMMYGYA 193
Query: 108 ENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVH 167
+ GE +A+ + + + N N +++ ++ CA + ++ G Q H +K
Sbjct: 194 QMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSF 253
Query: 168 IKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMP- 226
+ S+ + +Y+ G+ A ++ +E + WNAM+ Y + + E+F M
Sbjct: 254 VGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGI--WNAMLKAYAQHSHTQKVIELFKRMKL 311
Query: 227 ---DKNVGSWNAMISGLARCGMIENARTLFDEMGER----DEISWSAIIDGYIKQRCFKE 279
N ++ +++ + G+++ R FD+M E + +++++D + +E
Sbjct: 312 SGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQE 371
Query: 280 ALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAV--LGTAL 337
ALEV M I P+ + ++LT C +H E + D V LG
Sbjct: 372 ALEVITNM---PIDPTESVWGALLTSCT----------VHKNTELAAFAADKVFELGPVS 418
Query: 338 IDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKL--FTKMNGEKRKP 395
M++ ++ A GR EDA K + GEK K
Sbjct: 419 SGMHI------------------------SLSNAYAADGRFEDAAKARKLLRDRGEK-KE 453
Query: 396 NGVTFVGVLNACAHAGMVERGLGLFNSMKRVY----EIEPEMEHFGCVVD 441
G+++V N ER K +Y E+ EME G + D
Sbjct: 454 TGLSWVEERNKVHTFAAGERR---HEKSKEIYEKLAELGEEMEKAGYIAD 500
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 335 bits (860), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 193/551 (35%), Positives = 311/551 (56%), Gaps = 42/551 (7%)
Query: 29 QKTVLDILNKKCFHSLQHLKQAHA-IILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKV 87
++T L ++ F L +KQ H II+ +++ +L+K Y NF +A KV
Sbjct: 133 RQTFLYLMKASSF--LSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYME--LGNFGVAEKV 188
Query: 88 FDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSV 147
F +P P+V N+ + G + G +A+ Y KM+ P+++T +L C +
Sbjct: 189 FARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDI 248
Query: 148 KEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMID 207
+ G H ++ ++G +Y+S ++I NA++D
Sbjct: 249 RLGKGVHGWIERRG------------PVYSS-------------------NLILSNALLD 277
Query: 208 GYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAI 267
Y KC E A F M K++ SWN M+ G R G +E A+ +FD+M +RD +SW+++
Sbjct: 278 MYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSL 337
Query: 268 IDGYIKQRCFKEAL-EVFHQMQ-REKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERN 325
+ GY K+ C + + E+F++M EK+KP R + S+++ AN G L GRW+H V R
Sbjct: 338 LFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRL 397
Query: 326 SIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLF 385
++ DA L +ALIDMY KCG ++ A+ VF+ ++V+ W +MI GLA HG + A++LF
Sbjct: 398 QLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLF 457
Query: 386 TKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGR 445
+M E PN VT + VL AC+H+G+VE GL +FN MK + +PE EH+G +VDLL R
Sbjct: 458 GRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCR 517
Query: 446 AGLVEEAEKFIE-SMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYAL 504
AG VEEA+ ++ MP++P+ ++WG++L+ACR ++E E LL +EP G Y L
Sbjct: 518 AGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVL 577
Query: 505 LSNIYAKAGRWDDVARVRKLMKERGIETVPG-SSMMDMGGKVHEFKMGD-SSHPQMKEIY 562
LSNIYA GRW + R+ M+ RG++ G SS++ + G +H F + +HP+ EI
Sbjct: 578 LSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEG-LHRFVAAEKQNHPRWTEIK 636
Query: 563 LMLEKMMDKLQ 573
+L+ + ++++
Sbjct: 637 RILQHLYNEMK 647
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 120/292 (41%), Gaps = 71/292 (24%)
Query: 215 VEAANEVFVNM-PDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIK 273
++ A +F+N P+ NV +N MIS ++ K
Sbjct: 84 LDLAKLLFLNFTPNPNVFVYNTMISAVSSS-----------------------------K 114
Query: 274 QRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHS-FVERNSIQVDAV 332
CF ++ M R ++ P R ++ + + + Q IH + + +
Sbjct: 115 NECFG----LYSSMIRHRVSPDRQTFLYLMKASSFLSEVKQ---IHCHIIVSGCLSLGNY 167
Query: 333 LGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEK 392
L +L+ Y++ G +A +VF +M +VS++N MI G A G + +A+KL+ KM +
Sbjct: 168 LWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDG 227
Query: 393 RKPNGVTFVGVLNACAHA----------GMVER-------GLGLFNSM------------ 423
+P+ T + +L C H G +ER L L N++
Sbjct: 228 IEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGL 287
Query: 424 -KRVYEI--EPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALL 472
KR ++ + +M + +V R G +E A+ + MP K ++ W +LL
Sbjct: 288 AKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMP-KRDLVSWNSLL 338
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 334 bits (857), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 182/579 (31%), Positives = 313/579 (54%), Gaps = 45/579 (7%)
Query: 133 TYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDES 192
TY L +AC S++ + + F++ G + ++ + + M+ G+ +AR++ DE
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEI 184
Query: 193 GKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM----PDKNVGSWNAMI---SGL----- 240
+ ++ + ++I G++ G A E+F M D ++ M+ +GL
Sbjct: 185 --PERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYV 242
Query: 241 ---------------------------ARCGMIENARTLFDEMGERDEISWSAIIDGYIK 273
++CG IE+AR F+ M E+ ++W+ +I GY
Sbjct: 243 GKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYAL 302
Query: 274 QRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVL 333
+EAL + + M+ + + L M+ + + L+ + H+ + RN + + V
Sbjct: 303 HGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVA 362
Query: 334 GTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKR 393
TAL+D Y K GR+D A VF+K+ + + +WNA++GG A HGR DA+KLF KM
Sbjct: 363 NTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANV 422
Query: 394 KPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAE 453
PN VTF+ VL+ACA++G+ E+G +F SM V+ I+P H+ C+++LLGR GL++EA
Sbjct: 423 APNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAI 482
Query: 454 KFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAG 513
FI P+K V +W ALLNACR+ N+ELG V L M P G Y ++ N+Y G
Sbjct: 483 AFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMG 542
Query: 514 RWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDS----SHPQMKEIYLMLEKMM 569
+ + A V + ++ +G+ +P + +++G + H F GD + ++IY ++++M
Sbjct: 543 KTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDELM 602
Query: 570 DKLQIEGYSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCA 629
+++ GYS + D++E+E+E V + HSEK+A+A+GL++ L I +N R+C
Sbjct: 603 EEISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVNTPEWNPLQITQNHRICK 662
Query: 630 DCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
+CH + +S + G +++RD R+HHFK G CSC +W
Sbjct: 663 NCHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 162/376 (43%), Gaps = 43/376 (11%)
Query: 159 KQGLTGDVHIKSAGIQMYASF------GLFREARKM---LDESGKTQTDVICWNAMIDGY 209
K + D I +G+ + + FREA ++ L+ + V ++A+++
Sbjct: 74 KDQILDDTQISKSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEAC 133
Query: 210 LKCGEVEAANEVFVNMPDKNVGSWNAMISGL----ARCGMIENARTLFDEMGERDEISWS 265
++ + V+ M M++ + +CGMI +AR LFDE+ ER+ S+
Sbjct: 134 IRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYY 193
Query: 266 AIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERN 325
+II G++ + EA E+F M E H ML A +GS+ G+ +H +
Sbjct: 194 SIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKL 253
Query: 326 SIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLF 385
+ + + LIDMY KCG ++ A FE M + WN +I G A+HG +E+A+ L
Sbjct: 254 GVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLL 313
Query: 386 TKMNGEKRKPNGVTFVGV-----------LNACAHAGMVERGLGLFNSMKRVYEIEPEME 434
M + T + L AHA ++ G E E+
Sbjct: 314 YDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGF------------ESEIV 361
Query: 435 HFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGN----VELGERVGWI 490
+VD + G V+ A + +P K N+ W AL+ HG V+L E++ I
Sbjct: 362 ANTALVDFYSKWGRVDTARYVFDKLPRK-NIISWNALMGGYANHGRGTDAVKLFEKM--I 418
Query: 491 LLDMEPRNSGRYALLS 506
++ P + A+LS
Sbjct: 419 AANVAPNHVTFLAVLS 434
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 155/382 (40%), Gaps = 44/382 (11%)
Query: 84 ATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAV 143
A ++FD IP N++ + G + G +A + M S T+ + +A A
Sbjct: 177 ARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAG 236
Query: 144 TGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWN 203
GS+ G Q H +K G+ + + I MY+ G +AR + + T + WN
Sbjct: 237 LGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTT--VAWN 294
Query: 204 AMIDGYLKCGEVEAANEVFVNMPDKNVG-------------------------------- 231
+I GY G E A + +M D V
Sbjct: 295 NVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRN 354
Query: 232 -------SWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVF 284
+ A++ ++ G ++ AR +FD++ ++ ISW+A++ GY +A+++F
Sbjct: 355 GFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLF 414
Query: 285 HQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIH-SFVERNSIQVDAVLGTALIDMYVK 343
+M + P+ ++L+ CA G +QG I S E + I+ A+ +I++ +
Sbjct: 415 EKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGR 474
Query: 344 CGRLDMAWEVFEKMKVR-EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVG 402
G LD A + ++ V+ W A++ + E + K+ G + G +V
Sbjct: 475 DGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLG-NYVV 533
Query: 403 VLNACAHAGMVERGLGLFNSMK 424
+ N G G+ +++
Sbjct: 534 MYNMYNSMGKTAEAAGVLETLE 555
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 4/166 (2%)
Query: 44 LQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYL 103
L+ KQAHA +++ F V+ T L + + + A VFD +PR N+ N +
Sbjct: 341 LELTKQAHASLIRNG-FESEIVANTALVDFYS-KWGRVDTARYVFDKLPRKNIISWNALM 398
Query: 104 KGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQ-FHAFVVKQGL 162
G +G A+ + KM+ N PN T+ + ACA +G ++G + F + G+
Sbjct: 399 GGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGI 458
Query: 163 TGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDG 208
+ I++ GL EA + + +T V W A+++
Sbjct: 459 KPRAMHYACMIELLGRDGLLDEAIAFIRRA-PLKTTVNMWAALLNA 503
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 333 bits (854), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 185/551 (33%), Positives = 298/551 (54%), Gaps = 9/551 (1%)
Query: 125 LNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYAS--FGLF 182
L P+ F + F A +VTGS+ T D + G +S +
Sbjct: 33 LQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSIL 92
Query: 183 REARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLAR 242
R +L S ++ D+ +N + + + E+ ++ + + L R
Sbjct: 93 FYNRMLL--SSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVR 150
Query: 243 C----GMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHL 298
C G +E A +FDEM RD +SW+ +I + +AL ++ +M E + +
Sbjct: 151 CYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYT 210
Query: 299 LPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMK 358
L ++L+ CA+V +L+ G +H + + ALIDMY KCG L+ A VF M+
Sbjct: 211 LVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMR 270
Query: 359 VREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLG 418
R+V TWN+MI G +HG +A+ F KM +PN +TF+G+L C+H G+V+ G+
Sbjct: 271 KRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVE 330
Query: 419 LFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIH 478
F M + + P ++H+GC+VDL GRAG +E + + I + + +W LL +C+IH
Sbjct: 331 HFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIH 390
Query: 479 GNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSM 538
N+ELGE L+ +E N+G Y L+++IY+ A A +RKL++ ++TVPG S
Sbjct: 391 RNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSW 450
Query: 539 MDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSP-NTSMVSYDIEEEEKETVL 597
+++G +VH+F + D HP+ IY L +++++ + GY P +++ + + + +
Sbjct: 451 IEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAGYKPEDSNRTAPTLSDRCLGSAD 510
Query: 598 KQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHF 657
HSEK+A+A+GL+ GTTL I KNLRVC DCHS K VSK + II+RDRVR+HHF
Sbjct: 511 TSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTKYVSKAFNREIIVRDRVRFHHF 570
Query: 658 KNGMCSCKDFW 668
+G+CSC D+W
Sbjct: 571 ADGICSCNDYW 581
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 11/181 (6%)
Query: 64 FVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMM 123
FVS L+ YA + A VF+ + + +V N + G +G +AIS + KM+
Sbjct: 244 FVSNALIDMYAKCG--SLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMV 301
Query: 124 VLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQ-GLTGDVHIKSAGIQMYASFGLF 182
RPN T+ L C+ G VKEGV+ + Q LT +V + +Y G
Sbjct: 302 ASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQL 361
Query: 183 REARKMLDESGKTQTDVICWNAM-----IDGYLKCGEVEAANEVFVNMPDKNVGSWNAMI 237
+ +M+ S D + W + I L+ GEV A + V + N G + M
Sbjct: 362 ENSLEMIYAS-SCHEDPVLWRTLLGSCKIHRNLELGEV--AMKKLVQLEAFNAGDYVLMT 418
Query: 238 S 238
S
Sbjct: 419 S 419
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 333 bits (853), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 186/499 (37%), Positives = 282/499 (56%), Gaps = 36/499 (7%)
Query: 80 NFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFK 139
N A K+FD F+ N ++ + +PH++I Y+ + RP+ T+ +F
Sbjct: 31 NLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFA 90
Query: 140 ACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDV 199
A A S + H+ + G D + I YA G AR++ DE K DV
Sbjct: 91 ASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSK--RDV 148
Query: 200 ICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGER 259
WNAMI GY + G+++AA E+F +MP KNV SW +ISG ++ G
Sbjct: 149 PVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGN-------------- 194
Query: 260 DEISWSAIIDGYIKQRCFKEALEVFHQMQREK-IKPSRHLLPSMLTVCANVGSLDQGRWI 318
+ EAL++F M+++K +KP+ + S+L CAN+G L+ GR +
Sbjct: 195 -----------------YSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRL 237
Query: 319 HSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKM-KVREVSTWNAMIGGLAIHGR 377
+ N + + A I+MY KCG +D+A +FE++ R + +WN+MIG LA HG+
Sbjct: 238 EGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGK 297
Query: 378 AEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFG 437
++A+ LF +M E KP+ VTFVG+L AC H GMV +G LF SM+ V++I P++EH+G
Sbjct: 298 HDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYG 357
Query: 438 CVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPR 497
C++DLLGR G ++EA I++MP+KP+ VWG LL AC HGNVE+ E L +EP
Sbjct: 358 CMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPT 417
Query: 498 NSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPG-SSMMDMGGKVHEFKMGDSSHP 556
N G ++SNIYA +WD V R+RKLMK+ + G S +++G VH+F + D SHP
Sbjct: 418 NPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHP 477
Query: 557 QMKEIYLMLEKMMDKLQIE 575
+ EIY +LE++ ++++E
Sbjct: 478 RSYEIYQVLEEIFRRMKLE 496
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 132/310 (42%), Gaps = 51/310 (16%)
Query: 47 LKQAHAIILKTAHFHDHFVSGTLLKCYAN-------------------PNFN-------- 79
L+ H+ ++ D F TL+ YA P +N
Sbjct: 101 LRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQR 160
Query: 80 --NFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNS-RPNKFTYPT 136
+ A ++FD +PR NV + G +NG +A+ + M S +PN T +
Sbjct: 161 RGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVS 220
Query: 137 LFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQ 196
+ ACA G ++ G + + + G ++++ +A I+MY+ G+ A+++ +E G Q
Sbjct: 221 VLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELG-NQ 279
Query: 197 TDVICWNAMIDGYLKCGEVEAANEVFVNM------PD--KNVGSWNAMISGLARCGMIEN 248
++ WN+MI G+ + A +F M PD VG A + G GM+
Sbjct: 280 RNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHG----GMVVK 335
Query: 249 ARTLFDEMGERDEIS-----WSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSML 303
+ LF M E +IS + +ID + +EA ++ M +KP + ++L
Sbjct: 336 GQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTM---PMKPDAVVWGTLL 392
Query: 304 TVCANVGSLD 313
C+ G+++
Sbjct: 393 GACSFHGNVE 402
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 331 bits (848), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 204/697 (29%), Positives = 345/697 (49%), Gaps = 79/697 (11%)
Query: 49 QAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIE 108
Q H +I+K+ + FVS +L+ Y + ++ K+FD IP+ +V N + ++
Sbjct: 202 QIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVK 261
Query: 109 NGEPHKAISCYHKM-MVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVH 167
G+ HKA +++M V + FT TL +C + + G + H ++ GL ++
Sbjct: 262 EGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELS 321
Query: 168 IKSAGIQMYA-------------------------------SFGLFREARKMLDESGKTQ 196
+ +A I Y+ SFG+ A ++ + T+
Sbjct: 322 VNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIF--ANVTE 379
Query: 197 TDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNV-------------------------- 230
+ I +NA++ G+ + G A ++F +M + V
Sbjct: 380 KNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQI 439
Query: 231 --------GSWN-----AMISGLARCGMIENARTLFDEMGERDEIS--WSAIIDGYIKQR 275
++N A++ RC + +A +FD+ + S ++II GY +
Sbjct: 440 HGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNG 499
Query: 276 CFKEALEVFHQ-MQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLG 334
+A+ +FH+ + +K+ L +L VC +G + G IH + + D LG
Sbjct: 500 LPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLG 559
Query: 335 TALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRK 394
+LI MY KC D A ++F M+ +V +WN++I + ++A+ L+++MN ++ K
Sbjct: 560 NSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIK 619
Query: 395 PNGVTFVGVLNACAH--AGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEA 452
P+ +T V++A + + + LF SMK +Y+IEP EH+ V +LG GL+EEA
Sbjct: 620 PDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEA 679
Query: 453 EKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKA 512
E I SMPV+P V+V ALL++CRIH N + +RV ++L +P Y L SNIY+ +
Sbjct: 680 EDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSAS 739
Query: 513 GRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKL 572
G W +R+ M+ERG P S + K+H F D+SHPQ K+IY LE ++ +
Sbjct: 740 GFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGLEILIMEC 799
Query: 573 QIEGYSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKP-GTTLHIVKNLRVCADC 631
GY PNT V +++E K++ L HS K+A+ +G+L + G + ++KN+ +C DC
Sbjct: 800 LKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGILSSNTRGKPVRVMKNVMLCGDC 859
Query: 632 HSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
H FK +S + I++RD +HHF NG CSC+D W
Sbjct: 860 HEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 157/347 (45%), Gaps = 11/347 (3%)
Query: 215 VEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQ 274
+A + F+ + ++ NA+IS + G A +F + +S++A+I G+ +
Sbjct: 99 TKAVHASFLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRL 158
Query: 275 RCFKEALEVFHQMQREK-IKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVL 333
EAL+VF +M++ ++P+ + ++LT C V G IH + ++ +
Sbjct: 159 NLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFV 218
Query: 334 GTALIDMYVK--CGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNG- 390
+L+ +Y K D ++F+++ R+V++WN ++ L G++ A LF +MN
Sbjct: 219 SNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRV 278
Query: 391 EKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVE 450
E + T +L++C + ++ RG L R+ ++ E+ ++ + ++
Sbjct: 279 EGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQ-ELSVNNALIGFYSKFWDMK 337
Query: 451 EAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYA 510
+ E E M + V + ++ A G V+ I ++ +N+ Y L +
Sbjct: 338 KVESLYEMMMAQDAVT-FTEMITAYMSFGMVDSAVE---IFANVTEKNTITYNALMAGFC 393
Query: 511 KAGRWDDVARVRKLMKERGIETVPGS--SMMDMGGKVHEFKMGDSSH 555
+ G ++ M +RG+E S S +D G V E K+ + H
Sbjct: 394 RNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIH 440
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 142/373 (38%), Gaps = 44/373 (11%)
Query: 41 FHSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCN 100
+H ++ K HA LK + L+ Y F A VF + P V
Sbjct: 93 YHDVEVTKAVHASFLKLREEKTR-LGNALISTYLKLGFPR--EAILVFVSLSSPTVVSYT 149
Query: 101 IYLKGSIENGEPHKAISCYHKMMVLN-SRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVK 159
+ G +A+ + +M +PN++T+ + AC G+Q H +VK
Sbjct: 150 ALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVK 209
Query: 160 QGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAAN 219
G V + ++ + +Y +SG + DV+
Sbjct: 210 SGFLNSVFVSNSLMSLYDK------------DSGSSCDDVL------------------- 238
Query: 220 EVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGE-----RDEISWSAIIDGYIKQ 274
++F +P ++V SWN ++S L + G A LF EM D + S ++
Sbjct: 239 KLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDS 298
Query: 275 RCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLG 334
E+ + R + + +++ + + + + S E Q DAV
Sbjct: 299 SVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKK---VESLYEMMMAQ-DAVTF 354
Query: 335 TALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRK 394
T +I Y+ G +D A E+F + + T+NA++ G +G A+KLFT M +
Sbjct: 355 TEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVE 414
Query: 395 PNGVTFVGVLNAC 407
+ ++AC
Sbjct: 415 LTDFSLTSAVDAC 427
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 330 bits (846), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 222/715 (31%), Positives = 348/715 (48%), Gaps = 82/715 (11%)
Query: 14 PIELSSDQAPSSKLS----QKTVLDILNKKCFHSLQHLKQAHAIILKTAHFHDHFVSGTL 69
P+EL S QA ++ Q+ +LD +N L H +H +F+
Sbjct: 53 PVELQSQQAYAALFQACAEQRNLLDGIN------LHHHMLSHPYCYSQNVILANFLINMY 106
Query: 70 LKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRP 129
KC N A +VFD +P NV + G ++ G + C M+ + P
Sbjct: 107 AKC------GNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGF-CLFSSMLSHCFP 159
Query: 130 NKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASF--GLFREARK 187
N+FT ++ +C + G Q H +K GL +++ +A I MY G
Sbjct: 160 NEFTLSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAW 215
Query: 188 MLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVG---------------S 232
+ E+ K + +++ WN+MI + C + A VF+ M VG S
Sbjct: 216 TVFEAIKFK-NLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKS 274
Query: 233 WNAMISGLARC-----------GMIENART--------------------LFDEMGE-RD 260
+ + + +++C G++ LF EM RD
Sbjct: 275 SDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRD 334
Query: 261 EISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHS 320
++W+ II + + A+ +F Q+++EK+ P + S+L CA + + IH+
Sbjct: 335 IVAWNGIITAFAVYDP-ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHA 393
Query: 321 FVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAED 380
V + D VL +LI Y KCG LD+ VF+ M R+V +WN+M+ ++HG+ +
Sbjct: 394 QVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDS 453
Query: 381 AMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVV 440
+ +F KM+ P+ TF+ +L+AC+HAG VE GL +F SM E P++ H+ CV+
Sbjct: 454 ILPVFQKMD---INPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVI 510
Query: 441 DLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDM-EPRNS 499
D+L RA EAE+ I+ MP+ P+ VW ALL +CR HGN LG+ L ++ EP NS
Sbjct: 511 DMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNS 570
Query: 500 GRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMK 559
Y +SNIY G +++ K M+ + P S ++G KVHEF G P +
Sbjct: 571 MSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKE 630
Query: 560 EIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKETV-LKQHSEKIALAFGLLHAKPGTT 618
+Y L++++ L+ GY P S DIE+EE+E L HSEK+ALAF ++ + +
Sbjct: 631 AVYRELKRLISWLKEMGYVPEMRSASQDIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSD 690
Query: 619 -----LHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
+ I+KN R+C DCH+ KL SK+ G I+MRD R+HHFK+ CSC D+W
Sbjct: 691 CGVNLIQIMKNTRICIDCHNFMKLASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 328 bits (841), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 177/528 (33%), Positives = 295/528 (55%), Gaps = 35/528 (6%)
Query: 84 ATKVFDCIP-RPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNS-RPNKFTYPTLFKAC 141
A K+FD P R + F+ N +K +E + + + Y + P+ FT+ TL K+C
Sbjct: 29 ARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSC 88
Query: 142 AVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDE---------- 191
+++ V +G+Q H+ + + G D+++ + + MYA FG AR DE
Sbjct: 89 SLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWT 148
Query: 192 ---SGKTQ-----------------TDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVG 231
SG + DV+ +NAM+DG++K G++ +A +F M K V
Sbjct: 149 ALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVI 208
Query: 232 SWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQ-RE 290
+W MI G I+ AR LFD M ER+ +SW+ +I GY + + +E + +F +MQ
Sbjct: 209 TWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATT 268
Query: 291 KIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMA 350
+ P + S+L ++ G+L G W H FV+R + + TA++DMY KCG ++ A
Sbjct: 269 SLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKA 328
Query: 351 WEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHA 410
+F++M ++V++WNAMI G A++G A A+ LF M E+ KP+ +T + V+ AC H
Sbjct: 329 KRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHG 387
Query: 411 GMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGA 470
G+VE G F+ M+ + + ++EH+GC+VDLLGRAG ++EAE I +MP +PN + +
Sbjct: 388 GLVEEGRKWFHVMREM-GLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSS 446
Query: 471 LLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGI 530
L+AC + ++E ER+ +++EP+N G Y LL N+YA RWDD V+ +M++
Sbjct: 447 FLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQA 506
Query: 531 ETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYS 578
+ G S++++ V EF GD++HP + I+L+L ++ + E Y+
Sbjct: 507 KKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLMHMNEEKYN 554
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 117/250 (46%), Gaps = 13/250 (5%)
Query: 77 NFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNS-RPNKFTYP 135
N + A K+FD +P N+ N + G +N +P + I + +M S P+ T
Sbjct: 219 NIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTIL 278
Query: 136 TLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKT 195
++ A + TG++ G H FV ++ L V + +A + MY+ G +A+++ DE +
Sbjct: 279 SVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEK 338
Query: 196 QTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARC---GMIENARTL 252
Q V WNAMI GY G AA ++FV M + M++ + C G++E R
Sbjct: 339 Q--VASWNAMIHGYALNGNARAALDLFVTMMIEEKPDEITMLAVITACNHGGLVEEGRKW 396
Query: 253 FD---EMGERDEIS-WSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCAN 308
F EMG +I + ++D + KEA ++ M E P+ +L S L+ C
Sbjct: 397 FHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFE---PNGIILSSFLSACGQ 453
Query: 309 VGSLDQGRWI 318
+++ I
Sbjct: 454 YKDIERAERI 463
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 327 bits (837), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 185/561 (32%), Positives = 291/561 (51%), Gaps = 42/561 (7%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSI 107
+ HA ++K+ + D FV + + N ++ A KVF+ +P + N L G
Sbjct: 72 EMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDY--AAKVFERMPERDATTWNAMLSGFC 129
Query: 108 ENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVH 167
++G KA S + +M + P+ T TL ++ + S+K HA ++ G+ V
Sbjct: 130 QSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVT 189
Query: 168 IKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAAN-------- 219
+ + I Y G A+ + + + V+ WN+M Y GE A
Sbjct: 190 VANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLR 249
Query: 220 -------EVFVNMP------------------------DKNVGSWNAMISGLARCGMIEN 248
F+N+ D+++ + N IS ++ +
Sbjct: 250 EEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCS 309
Query: 249 ARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCAN 308
AR LFD M R +SW+ +I GY ++ EAL +FH M + KP L S+++ C
Sbjct: 310 ARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGK 369
Query: 309 VGSLDQGRWIHSFVERNSIQVDAVL-GTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNA 367
GSL+ G+WI + + + D V+ ALIDMY KCG + A ++F+ + V TW
Sbjct: 370 FGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTT 429
Query: 368 MIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVY 427
MI G A++G +A+KLF+KM KPN +TF+ VL ACAH+G +E+G F+ MK+VY
Sbjct: 430 MIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVY 489
Query: 428 EIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERV 487
I P ++H+ C+VDLLGR G +EEA + I +M KP+ +WGALLNAC+IH NV++ E+
Sbjct: 490 NISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQA 549
Query: 488 GWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHE 547
L ++EP+ + Y ++NIYA AG WD AR+R +MK+R I+ PG S++ + GK H
Sbjct: 550 AESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHS 609
Query: 548 FKMGDSSHPQMKEIYLMLEKM 568
F +G+ H + + IY L +
Sbjct: 610 FTVGEHGHVENEVIYFTLNGL 630
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/434 (23%), Positives = 175/434 (40%), Gaps = 70/434 (16%)
Query: 100 NIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVK 159
N+ ++ ++ +P +++ + +M PN FT+P + KACA V HA ++K
Sbjct: 21 NLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIK 80
Query: 160 QGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAAN 219
DV + +A + M+ A K+ + + D WNAM+ G+ + G + A
Sbjct: 81 SPFWSDVFVGTATVDMFVKCNSVDYAAKVFER--MPERDATTWNAMLSGFCQSGHTDKAF 138
Query: 220 EVFVNM------PDK---------------------------------NVGSWNAMISGL 240
+F M PD V N IS
Sbjct: 139 SLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTY 198
Query: 241 ARCGMIENARTLFDEM--GERDEISWSAIIDGYIKQRCFKEALEVFH---QMQREKIKPS 295
+CG +++A+ +F+ + G+R +SW+++ Y F EA + F M RE+ KP
Sbjct: 199 GKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAY---SVFGEAFDAFGLYCLMLREEFKPD 255
Query: 296 RHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFE 355
++ C N +L QGR IHS D I MY K A +F+
Sbjct: 256 LSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFD 315
Query: 356 KMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVER 415
M R +W MI G A G ++A+ LF M KP+ VT + +++ C G +E
Sbjct: 316 IMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLET 375
Query: 416 GLGLFNSMKRVYEIEPEMEHFGC----------VVDLLGRAGLVEEAEKFIESMPVKPNV 465
G I+ + +GC ++D+ + G + EA ++ P K V
Sbjct: 376 GKW----------IDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEK-TV 424
Query: 466 AVWGALLNACRIHG 479
W ++ ++G
Sbjct: 425 VTWTTMIAGYALNG 438
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 111/234 (47%), Gaps = 8/234 (3%)
Query: 250 RTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANV 309
R L+ G +W+ I + + E+L +F +M+R +P+ P + CA +
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 310 GSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMI 369
+ +H+ + ++ D +GTA +DM+VKC +D A +VFE+M R+ +TWNAM+
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 125
Query: 370 GGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRV--- 426
G G + A LF +M + P+ VT + ++ + + E+ L L +M V
Sbjct: 126 SGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSAS----FEKSLKLLEAMHAVGIR 181
Query: 427 YEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAV-WGALLNACRIHG 479
++ ++ + G+ G ++ A+ E++ V W ++ A + G
Sbjct: 182 LGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFG 235
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 113/270 (41%), Gaps = 19/270 (7%)
Query: 47 LKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGS 106
L +HAI L T D T + Y+ + A +FD + + + G
Sbjct: 277 LIHSHAIHLGTDQ--DIEAINTFISMYSKSE--DTCSARLLFDIMTSRTCVSWTVMISGY 332
Query: 107 IENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGD- 165
E G+ +A++ +H M+ +P+ T +L C GS++ G A G D
Sbjct: 333 AEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDN 392
Query: 166 VHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM 225
V I +A I MY+ G EAR + D + + V+ W MI GY G A ++F M
Sbjct: 393 VMICNALIDMYSKCGSIHEARDIFDNT--PEKTVVTWTTMIAGYALNGIFLEALKLFSKM 450
Query: 226 PD----KNVGSWNAMISGLARCGMIENARTLFDEMGERDEIS-----WSAIIDGYIKQRC 276
D N ++ A++ A G +E F M + IS +S ++D ++
Sbjct: 451 IDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGK 510
Query: 277 FKEALEVFHQMQREKIKPSRHLLPSMLTVC 306
+EALE+ M KP + ++L C
Sbjct: 511 LEEALELIRNMSA---KPDAGIWGALLNAC 537
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 318 bits (816), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 195/564 (34%), Positives = 291/564 (51%), Gaps = 64/564 (11%)
Query: 30 KTVLDILNKKCFHSLQHLKQAHAIILKTAHFHDHFVSGT-LLKCYANPNFNNFTLATKVF 88
+ +L IL++ +L H +Q HA ++ F D V G+ L Y N +F AT F
Sbjct: 8 RALLTILSQA--KTLNHTQQVHAKVIIHG-FEDEVVLGSSLTNAYIQSNRLDF--ATSSF 62
Query: 89 DCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNK-------FTYPTLFKAC 141
+ IP + N + +I +G CY +++L +R + F KAC
Sbjct: 63 NRIP---CWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKAC 119
Query: 142 AVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVIC 201
G ++ G+ H +K GL D ++ + ++MYA G A+K+ DE + +
Sbjct: 120 VGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNS--VL 177
Query: 202 WNAMIDGYLK--------------------------------CGEVEAAN---------- 219
W ++ GYLK CG V A
Sbjct: 178 WGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSI 237
Query: 220 -EVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFK 278
F++ D S +I +C +++NAR LF+ +R+ + W+ +I G+ K
Sbjct: 238 RRSFIDQSDYLQAS---IIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAV 294
Query: 279 EALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALI 338
EA ++F QM RE I P++ L ++L C+++GSL G+ +H ++ RN I++DAV T+ I
Sbjct: 295 EAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFI 354
Query: 339 DMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGV 398
DMY +CG + MA VF+ M R V +W++MI I+G E+A+ F KM + PN V
Sbjct: 355 DMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSV 414
Query: 399 TFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIES 458
TFV +L+AC+H+G V+ G F SM R Y + PE EH+ C+VDLLGRAG + EA+ FI++
Sbjct: 415 TFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDN 474
Query: 459 MPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDV 518
MPVKP + WGALL+ACRIH V+L + LL MEP S Y LLSNIYA AG W+ V
Sbjct: 475 MPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMV 534
Query: 519 ARVRKLMKERGIETVPGSSMMDMG 542
VR+ M +G G S ++G
Sbjct: 535 NCVRRKMGIKGYRKHVGQSATEVG 558
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 315 bits (806), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 179/547 (32%), Positives = 283/547 (51%), Gaps = 51/547 (9%)
Query: 43 SLQHLKQAHAIILKTAHFHDHFVSGTLLK-CYANPNFNNFTLATKVFDCIPRPNVFVCNI 101
SL L Q H +++K++ + L+ C P N + A VF+ I P+V++ N
Sbjct: 18 SLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNS 77
Query: 102 YLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQG 161
++G + P KA+ Y +M+ P+ FT+P + KAC+ ++ G H FVVK G
Sbjct: 78 MIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTG 137
Query: 162 LTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEV 221
++++ + + MY G ++ ++ Q +V+ W ++I G++ A E
Sbjct: 138 FEVNMYVSTCLLHMYMCCGEVNYGLRVFEDI--PQWNVVAWGSLISGFVNNNRFSDAIEA 195
Query: 222 FVNMPDKNV----------------------GSW-------------------------N 234
F M V G W
Sbjct: 196 FREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILAT 255
Query: 235 AMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKP 294
++I A+CG + AR LFD M ER +SW++II GY + +EAL +F M I P
Sbjct: 256 SLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAP 315
Query: 295 SRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVF 354
+ S++ G G+ IH++V + DA + AL++MY K G + A + F
Sbjct: 316 DKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAF 375
Query: 355 EKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGE-KRKPNGVTFVGVLNACAHAGMV 413
E ++ ++ W +I GLA HG +A+ +F +M + P+G+T++GVL AC+H G+V
Sbjct: 376 EDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLV 435
Query: 414 ERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLN 473
E G F M+ ++ +EP +EH+GC+VD+L RAG EEAE+ +++MPVKPNV +WGALLN
Sbjct: 436 EEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLN 495
Query: 474 ACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETV 533
C IH N+EL +R+ ++ + E SG Y LLSNIYAKAGRW DV +R+ MK + ++ V
Sbjct: 496 GCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKV 555
Query: 534 PGSSMMD 540
G S ++
Sbjct: 556 LGHSSVE 562
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 313 bits (803), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 185/566 (32%), Positives = 301/566 (53%), Gaps = 69/566 (12%)
Query: 35 ILNKKCFHSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNF--------NNFTLATK 86
L KKC S+ L+Q A +L L PNF +F ++
Sbjct: 42 FLLKKCI-SVNQLRQIQAQML--------------LHSVEKPNFLIPKAVELGDFNYSSF 86
Query: 87 VFDCIPRPNVFVCNIYLKGSIENGEPHKA-ISCYHKMMVLNSRPNKFTYPTLFKACAVTG 145
+F PN + N ++G H+A +S Y +M +P+KFTY +F ACA
Sbjct: 87 LFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLE 146
Query: 146 SVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAM 205
+ G H+ + K GL DVHI + I MYA G ARK+ DE T+ D + WN+M
Sbjct: 147 EIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEI--TERDTVSWNSM 204
Query: 206 IDGYLKCGEVEAANEVFVNM------PD-----------------------------KNV 230
I GY + G + A ++F M PD K +
Sbjct: 205 ISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKI 264
Query: 231 G----SWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQ 286
G + +IS +CG +++AR +F++M ++D ++W+A+I Y + EA ++F +
Sbjct: 265 GLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFE 324
Query: 287 MQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGR 346
M++ + P L ++L+ C +VG+L+ G+ I + S+Q + + T L+DMY KCGR
Sbjct: 325 MEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGR 384
Query: 347 LDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNA 406
++ A VFE M V+ +TWNAMI A G A++A+ LF +M+ P+ +TF+GVL+A
Sbjct: 385 VEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMS---VPPSDITFIGVLSA 441
Query: 407 CAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVA 466
C HAG+V +G F+ M ++ + P++EH+ ++DLL RAG+++EA +F+E P KP+
Sbjct: 442 CVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEI 501
Query: 467 VWGALLNACRIHGNVELGERVGWILLDM-EPRNSGRYALLSNIYAKAGRWDDVARVRKLM 525
+ A+L AC +V + E+ +L++M E +N+G Y + SN+ A WD+ A++R LM
Sbjct: 502 MLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALM 561
Query: 526 KERGIETVPGSSMMDMGGKVHEFKMG 551
++RG+ PG S +++ G++ EF G
Sbjct: 562 RDRGVVKTPGCSWIEIEGELMEFLAG 587
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 312 bits (799), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 179/603 (29%), Positives = 311/603 (51%), Gaps = 50/603 (8%)
Query: 20 DQAPSSKLSQKTVLDILNKKCFHSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFN 79
DQ + ++ VL + K L Q H +++ + + + +LL Y+
Sbjct: 233 DQISPNAVTFDCVLSVCASKLLIDLG--VQLHGLVVVSGVDFEGSIKNSLLSMYSK--CG 288
Query: 80 NFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFK 139
F A+K+F + R + N + G +++G ++++ +++M+ P+ T+ +L
Sbjct: 289 RFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLP 348
Query: 140 ACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDV 199
+ + +++ Q H ++++ ++ D+ + SA I Y A+ + + DV
Sbjct: 349 SVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQC--NSVDV 406
Query: 200 ICWNAMIDGYLKCGEVEAANEVFVNM------PDK------------------------- 228
+ + AMI GYL G + E+F + P++
Sbjct: 407 VVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGF 466
Query: 229 ----------NVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFK 278
N+G A+I A+CG + A +F+ + +RD +SW+++I +
Sbjct: 467 IIKKGFDNRCNIGC--AVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPS 524
Query: 279 EALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALI 338
A+++F QM I + + L+ CAN+ S G+ IH F+ ++S+ D + LI
Sbjct: 525 AAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLI 584
Query: 339 DMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKM-NGEKRKPNG 397
DMY KCG L A VF+ MK + + +WN++I HG+ +D++ LF +M +P+
Sbjct: 585 DMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQ 644
Query: 398 VTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIE 457
+TF+ ++++C H G V+ G+ F SM Y I+P+ EH+ CVVDL GRAG + EA + ++
Sbjct: 645 ITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVK 704
Query: 458 SMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDD 517
SMP P+ VWG LL ACR+H NVEL E L+D++P NSG Y L+SN +A A W+
Sbjct: 705 SMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWES 764
Query: 518 VARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGY 577
V +VR LMKER ++ +PG S +++ + H F GD +HP+ IY +L ++ +L++EGY
Sbjct: 765 VTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGY 824
Query: 578 SPN 580
P
Sbjct: 825 IPQ 827
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/460 (24%), Positives = 214/460 (46%), Gaps = 45/460 (9%)
Query: 62 DHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHK 121
+ FV+ +L+K Y + + +K+FD + + + + N+ L G + G I +
Sbjct: 172 NEFVASSLIKAYLE--YGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSV 229
Query: 122 MMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGL 181
M + PN T+ + CA + GVQ H VV G+ + IK++ + MY+ G
Sbjct: 230 MRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGR 289
Query: 182 FREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM------PDK------- 228
F +A K+ ++ D + WN MI GY++ G +E + F M PD
Sbjct: 290 FDDASKLFRM--MSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLL 347
Query: 229 --------------------------NVGSWNAMISGLARCGMIENARTLFDEMGERDEI 262
++ +A+I +C + A+ +F + D +
Sbjct: 348 PSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVV 407
Query: 263 SWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFV 322
++A+I GY+ + ++LE+F + + KI P+ L S+L V + +L GR +H F+
Sbjct: 408 VFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFI 467
Query: 323 ERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAM 382
+ +G A+IDMY KCGR+++A+E+FE++ R++ +WN+MI A A+
Sbjct: 468 IKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAI 527
Query: 383 KLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDL 442
+F +M + V+ L+ACA+ G + M + + + ++ ++D+
Sbjct: 528 DIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDM 586
Query: 443 LGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVE 482
+ G ++ A ++M K N+ W +++ AC HG ++
Sbjct: 587 YAKCGNLKAAMNVFKTMKEK-NIVSWNSIIAACGNHGKLK 625
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/529 (24%), Positives = 238/529 (44%), Gaps = 58/529 (10%)
Query: 1 MSTTATNFPSGLKPIELSSDQAPSSKLSQKTV---LDILNKKCFHS--LQHLKQAHAIIL 55
+S+ A F + P + S SS+ ++T+ L +L + C + L+ KQ HA ++
Sbjct: 3 ISSVAKRFAPAIAPYKKSLPLRNSSRFLEETIPRRLSLLLQACSNPNLLRQGKQVHAFLI 62
Query: 56 KTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIP--RPNVFVCNIYLKGSIENGEPH 113
+ D + +L YA +F+ K+F + R ++ N + + NG +
Sbjct: 63 VNSISGDSYTDERILGMYAM--CGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLN 120
Query: 114 KAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQ-GLTGDVHIKSAG 172
+A++ Y KM+ P+ T+P L KAC + K G+ F + V G+ + + S+
Sbjct: 121 QALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK-GIDFLSDTVSSLGMDCNEFVASSL 179
Query: 173 IQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNV-- 230
I+ Y +G K+ D Q D + WN M++GY KCG +++ + F M +
Sbjct: 180 IKAYLEYGKIDVPSKLFDRV--LQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISP 237
Query: 231 ------------------------------------GSW-NAMISGLARCGMIENARTLF 253
GS N+++S ++CG ++A LF
Sbjct: 238 NAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLF 297
Query: 254 DEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLD 313
M D ++W+ +I GY++ +E+L F++M + P S+L + +L+
Sbjct: 298 RMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLE 357
Query: 314 QGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLA 373
+ IH ++ R+SI +D L +ALID Y KC + MA +F + +V + AMI G
Sbjct: 358 YCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYL 417
Query: 374 IHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFN-SMKRVYEIEPE 432
+G D++++F + K PN +T V +L ++ G L +K+ ++
Sbjct: 418 HNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFD---N 474
Query: 433 MEHFGC-VVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGN 480
+ GC V+D+ + G + A + E + K ++ W +++ C N
Sbjct: 475 RCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSMITRCAQSDN 522
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 113/246 (45%), Gaps = 9/246 (3%)
Query: 241 ARCGMIENARTLFDEMG-ERDEI-SWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHL 298
A CG + +F + R I W++II +++ +AL + +M + P
Sbjct: 81 AMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVST 140
Query: 299 LPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMK 358
P ++ C + + ++ V + + + ++LI Y++ G++D+ ++F+++
Sbjct: 141 FPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVL 200
Query: 359 VREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLG 418
++ WN M+ G A G + +K F+ M ++ PN VTF VL+ CA +++ G+
Sbjct: 201 QKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQ 260
Query: 419 LFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIH 478
L + + V ++ E ++ + + G ++A K M + + W C I
Sbjct: 261 L-HGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS-RADTVTWN-----CMIS 313
Query: 479 GNVELG 484
G V+ G
Sbjct: 314 GYVQSG 319
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 311 bits (797), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 181/573 (31%), Positives = 296/573 (51%), Gaps = 49/573 (8%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSI 107
KQ HA IL+ D + L+ Y A K+F+ +P N+ L G
Sbjct: 269 KQIHAHILRYGLEMDASLMNVLIDSYVKCG--RVIAAHKLFNGMPNKNIISWTTLLSGYK 326
Query: 108 ENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVH 167
+N +A+ + M +P+ + ++ +CA ++ G Q HA+ +K L D +
Sbjct: 327 QNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSY 386
Query: 168 IKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCG---EVEAANEVFVN 224
+ ++ I MYA +ARK+ D DV+ +NAMI+GY + G E+ A +F +
Sbjct: 387 VTNSLIDMYAKCDCLTDARKVFDIFAAA--DVVLFNAMIEGYSRLGTQWELHEALNIFRD 444
Query: 225 MP---------------------------------------DKNVGSWNAMISGLARCGM 245
M + ++ + +A+I + C
Sbjct: 445 MRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYC 504
Query: 246 IENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTV 305
++++R +FDEM +D + W+++ GY++Q +EAL +F ++Q + +P +M+T
Sbjct: 505 LKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTA 564
Query: 306 CANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTW 365
N+ S+ G+ H + + ++ + + AL+DMY KCG + A + F+ R+V W
Sbjct: 565 AGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCW 624
Query: 366 NAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKR 425
N++I A HG + A+++ KM E +PN +TFVGVL+AC+HAG+VE GL F M R
Sbjct: 625 NSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR 684
Query: 426 VYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGE 485
+ IEPE EH+ C+V LLGRAG + +A + IE MP KP VW +LL+ C GNVEL E
Sbjct: 685 -FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAE 743
Query: 486 RVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKV 545
+ + +P++SG + +LSNIYA G W + +VR+ MK G+ PG S + + +V
Sbjct: 744 HAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEV 803
Query: 546 HEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYS 578
H F D SH + +IY +L+ ++ +QI G S
Sbjct: 804 HIFLSKDKSHCKANQIYEVLDDLL--VQIRGVS 834
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 131/531 (24%), Positives = 240/531 (45%), Gaps = 59/531 (11%)
Query: 49 QAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIE 108
Q + ++K+ D +V L+ Y N A VFD +P + + G ++
Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDFYLKDG--NIDYARLVFDALPEKSTVTWTTMISGCVK 226
Query: 109 NGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHI 168
G + ++ ++++M N P+ + T+ AC++ ++ G Q HA +++ GL D +
Sbjct: 227 MGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASL 286
Query: 169 KSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM--- 225
+ I Y G A K+ + G ++I W ++ GY + + A E+F +M
Sbjct: 287 MNVLIDSYVKCGRVIAAHKLFN--GMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKF 344
Query: 226 ---PD-----------------------------KNVGS----WNAMISGLARCGMIENA 249
PD N+G+ N++I A+C + +A
Sbjct: 345 GLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDA 404
Query: 250 RTLFDEMGERDEISWSAIIDGYIK---QRCFKEALEVFHQMQREKIKPSRHLLPSMLTVC 306
R +FD D + ++A+I+GY + Q EAL +F M+ I+PS S+L
Sbjct: 405 RKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRAS 464
Query: 307 ANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWN 366
A++ SL + IH + + + +D G+ALID+Y C L + VF++MKV+++ WN
Sbjct: 465 ASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWN 524
Query: 367 AMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLF-NSMKR 425
+M G E+A+ LF ++ + +P+ TF ++ A + V+ G +KR
Sbjct: 525 SMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKR 584
Query: 426 VYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGE 485
E P + + ++D+ + G E+A K +S + +V W +++++ HG G+
Sbjct: 585 GLECNPYITN--ALLDMYAKCGSPEDAHKAFDSAASR-DVVCWNSVISSYANHGE---GK 638
Query: 486 RVGWILLDM-----EPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIE 531
+ +L M EP +LS + AG +D + +LM GIE
Sbjct: 639 KALQMLEKMMSEGIEPNYITFVGVLSAC-SHAGLVEDGLKQFELMLRFGIE 688
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 140/602 (23%), Positives = 248/602 (41%), Gaps = 107/602 (17%)
Query: 62 DHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHK 121
D ++S L+ Y+ A KVF+ +P N+ + + +G +++ + +
Sbjct: 78 DTYLSNILINLYSRAG--GMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLE 135
Query: 122 MM-VLNSRPNKFTYPTLFKACA-VTGSVKEGV-QFHAFVVKQGLTGDVHIKSAGIQMYAS 178
PN++ + +AC+ + G + V Q +F+VK G DV++ + I Y
Sbjct: 136 FWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLK 195
Query: 179 FGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNV-------- 230
G AR + D + T + W MI G +K G + ++F + + NV
Sbjct: 196 DGNIDYARLVFDALPEKST--VTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILS 253
Query: 231 -------------------------------GSWNAMISGLARCGMIENARTLFDEMGER 259
N +I +CG + A LF+ M +
Sbjct: 254 TVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNK 313
Query: 260 DEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIH 319
+ ISW+ ++ GY + KEA+E+F M + +KP + S+LT CA++ +L G +H
Sbjct: 314 NIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVH 373
Query: 320 SFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGG---LAIHG 376
++ + ++ D+ + +LIDMY KC L A +VF+ +V +NAMI G L
Sbjct: 374 AYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQW 433
Query: 377 RAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHF 436
+A+ +F M +P+ +TFV +L A A S+ +I M +
Sbjct: 434 ELHEALNIFRDMRFRLIRPSLLTFVSLLRASAS----------LTSLGLSKQIHGLMFKY 483
Query: 437 GCVVDLLGRAGLVE---------EAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERV 487
G +D+ + L++ ++ + M VK ++ +W ++ G V+ E
Sbjct: 484 GLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMF-----AGYVQQSENE 537
Query: 488 GWILLDME---PRNSGRYALLSNIYAKAGRWDDVARVRKL---MKERGIETVP--GSSMM 539
+ L +E R +N+ AG V ++ + +RG+E P ++++
Sbjct: 538 EALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALL 597
Query: 540 DM----GGKVHEFKMGDSS-----------------HPQMKEIYLMLEKMMDKLQIEGYS 578
DM G K DS+ H + K+ MLEKMM EG
Sbjct: 598 DMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMS----EGIE 653
Query: 579 PN 580
PN
Sbjct: 654 PN 655
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 174/384 (45%), Gaps = 47/384 (12%)
Query: 41 FHSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCN 100
H+L Q HA +K +D +V+ +L+ YA + T A KVFD +V + N
Sbjct: 363 LHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKC--DCLTDARKVFDIFAAADVVLFN 420
Query: 101 IYLKGSIENG---EPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFV 157
++G G E H+A++ + M RP+ T+ +L +A A S+ Q H +
Sbjct: 421 AMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLM 480
Query: 158 VKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEA 217
K GL D+ SA I +Y++ +++R + DE D++ WN+M GY++ E E
Sbjct: 481 FKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDE--MKVKDLVIWNSMFAGYVQQSENEE 538
Query: 218 ANEVFVNM------PDK-----------NVGS----------------------WNAMIS 238
A +F+ + PD+ N+ S NA++
Sbjct: 539 ALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLD 598
Query: 239 GLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHL 298
A+CG E+A FD RD + W+++I Y K+AL++ +M E I+P+
Sbjct: 599 MYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYIT 658
Query: 299 LPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMK 358
+L+ C++ G ++ G + R I+ + ++ + + GRL+ A E+ EKM
Sbjct: 659 FVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMP 718
Query: 359 VREVS-TWNAMIGGLAIHGRAEDA 381
+ + W +++ G A G E A
Sbjct: 719 TKPAAIVWRSLLSGCAKAGNVELA 742
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 140/308 (45%), Gaps = 31/308 (10%)
Query: 172 GIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVG 231
G + +A R + +L +I W +D YL
Sbjct: 43 GRREFARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLS-------------------- 82
Query: 232 SWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQR-E 290
N +I+ +R G + AR +F++M ER+ +SWS ++ ++E+L VF + R
Sbjct: 83 --NILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTR 140
Query: 291 KIKPSRHLLPSMLTVCANVGSLDQGRW----IHSFVERNSIQVDAVLGTALIDMYVKCGR 346
K P+ ++L S + C+ + +GRW + SF+ ++ D +GT LID Y+K G
Sbjct: 141 KDSPNEYILSSFIQACSGLDG--RGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGN 198
Query: 347 LDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNA 406
+D A VF+ + + TW MI G GR+ +++LF ++ + P+G VL+A
Sbjct: 199 IDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSA 258
Query: 407 CAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVA 466
C+ +E G + + R Y +E + ++D + G V A K MP K N+
Sbjct: 259 CSILPFLEGGKQIHAHILR-YGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNK-NII 316
Query: 467 VWGALLNA 474
W LL+
Sbjct: 317 SWTTLLSG 324
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 152/330 (46%), Gaps = 20/330 (6%)
Query: 43 SLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATK--VFDCIPRPNVFVCN 100
SL KQ H ++ K D F L+ Y+N + L VFD + ++ + N
Sbjct: 469 SLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNC----YCLKDSRLVFDEMKVKDLVIWN 524
Query: 101 IYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQ 160
G ++ E +A++ + ++ + RP++FT+ + A SV+ G +FH ++K+
Sbjct: 525 SMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKR 584
Query: 161 GLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANE 220
GL + +I +A + MYA G +A K D + DV+CWN++I Y GE + A +
Sbjct: 585 GLECNPYITNALLDMYAKCGSPEDAHKAFDSAA--SRDVVCWNSVISSYANHGEGKKALQ 642
Query: 221 VFVNM----PDKNVGSWNAMISGLARCGMIENARTLFDEMG----ERDEISWSAIIDGYI 272
+ M + N ++ ++S + G++E+ F+ M E + + ++
Sbjct: 643 MLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLG 702
Query: 273 KQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAV 332
+ +A E+ +M KP+ + S+L+ CA G+++ + + D+
Sbjct: 703 RAGRLNKARELIEKM---PTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPK-DSG 758
Query: 333 LGTALIDMYVKCGRLDMAWEVFEKMKVREV 362
T L ++Y G A +V E+MKV V
Sbjct: 759 SFTMLSNIYASKGMWTEAKKVRERMKVEGV 788
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 310 bits (795), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 177/547 (32%), Positives = 299/547 (54%), Gaps = 39/547 (7%)
Query: 26 KLSQKTVLDI--LNKKCFHSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTL 83
+LS ++L + L K C S HL Q HA I++ D + + ++ + ++ +
Sbjct: 4 RLSHPSLLSLETLFKLC-KSEIHLNQIHARIIRKGLEQDQNLISIFIS-SSSSSSSSLSY 61
Query: 84 ATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLN-SRPNKFTYPTLFKACA 142
++ VF+ +P P ++ N +KG + +S +MM +RP+++T+P + K C+
Sbjct: 62 SSSVFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCS 121
Query: 143 VTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICW 202
G V+ G H V++ G DV + ++ + Y ARK+ E + + + W
Sbjct: 122 NNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGE--MPERNAVSW 179
Query: 203 NAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEI 262
A++ Y+K GE+E A +F MP++N+GSWNA++ GL + G + NA+ LFDEM +RD I
Sbjct: 180 TALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDII 239
Query: 263 SWSAIIDGYIK-------QRCFKEA------------------------LEVFHQMQREK 291
S++++IDGY K + F+EA +VF +M +
Sbjct: 240 SYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKN 299
Query: 292 IKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDA-VLGTALIDMYVKCGRLDMA 350
+KP ++ +++ C+ +G + + S++ + + + + ALIDM KCG +D A
Sbjct: 300 VKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRA 359
Query: 351 WEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHA 410
++FE+M R++ ++ +M+ G+AIHG +A++LF KM E P+ V F +L C +
Sbjct: 360 AKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQS 419
Query: 411 GMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGA 470
+VE GL F M++ Y I +H+ C+V+LL R G ++EA + I+SMP + + + WG+
Sbjct: 420 RLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGS 479
Query: 471 LLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGI 530
LL C +HGN E+ E V L ++EP+++G Y LLSNIYA RW DVA +R M E GI
Sbjct: 480 LLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGI 539
Query: 531 ETVPGSS 537
+ G S
Sbjct: 540 TKICGRS 546
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 308 bits (790), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 169/472 (35%), Positives = 256/472 (54%), Gaps = 35/472 (7%)
Query: 108 ENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACA--VTGSVKEGVQFHAFVVKQGLTGD 165
NG +A + M + PN T+ L C +GS G H + K GL
Sbjct: 48 RNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLD-- 105
Query: 166 VHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM 225
+ V+ A+I Y K G + A VF M
Sbjct: 106 ------------------------------RNHVMVGTAIIGMYSKRGRFKKARLVFDYM 135
Query: 226 PDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFH 285
DKN +WN MI G R G ++NA +FD+M ERD ISW+A+I+G++K+ +EAL F
Sbjct: 136 EDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFR 195
Query: 286 QMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCG 345
+MQ +KP + + L C N+G+L G W+H +V + + + +LID+Y +CG
Sbjct: 196 EMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCG 255
Query: 346 RLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLN 405
++ A +VF M+ R V +WN++I G A +G A +++ F KM + KP+ VTF G L
Sbjct: 256 CVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALT 315
Query: 406 ACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNV 465
AC+H G+VE GL F MK Y I P +EH+GC+VDL RAG +E+A K ++SMP+KPN
Sbjct: 316 ACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNE 375
Query: 466 AVWGALLNACRIHG-NVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKL 524
V G+LL AC HG N+ L ER+ L D+ ++ Y +LSN+YA G+W+ +++R+
Sbjct: 376 VVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRK 435
Query: 525 MKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEG 576
MK G++ PG S +++ +H F GD++H + I +LE + L+++G
Sbjct: 436 MKGLGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQG 487
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 141/346 (40%), Gaps = 73/346 (21%)
Query: 262 ISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANV--GSLDQGRWIH 319
+SW++ I+ + EA + F M ++P+ ++L+ C + GS G +H
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLH 96
Query: 320 SF-----VERNSIQV---------------------------DAVLGTALIDMYVKCGRL 347
+ ++RN + V ++V +ID Y++ G++
Sbjct: 97 GYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQV 156
Query: 348 DMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNAC 407
D A ++F+KM R++ +W AMI G G E+A+ F +M KP+ V + LNAC
Sbjct: 157 DNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNAC 216
Query: 408 AHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMP------- 460
+ G + GL + + + + + ++DL R G VE A + +M
Sbjct: 217 TNLGALSFGLWVHRYVLS-QDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSW 275
Query: 461 ---------------------------VKPNVAVWGALLNACRIHGNVELGERVGWIL-- 491
KP+ + L AC G VE G R I+
Sbjct: 276 NSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKC 335
Query: 492 -LDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGS 536
+ PR Y L ++Y++AGR +D ++ + M + E V GS
Sbjct: 336 DYRISPRIE-HYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGS 380
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 178/568 (31%), Positives = 292/568 (51%), Gaps = 54/568 (9%)
Query: 153 FHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKC 212
H +K G D + + Y ARK+ DE + +V+ W ++I GY
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDE--MCEPNVVSWTSVISGYNDM 108
Query: 213 GEVEAANEVFVNMPD----------------------------------------KNVGS 232
G+ + A +F M + +N+
Sbjct: 109 GKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVV 168
Query: 233 WNAMISGLARCGMIENARTLFDEM--GERDEISWSAIIDGYIKQRCFKEALEVFHQMQRE 290
++++ +C +E AR +FD M R+ +SW+++I Y + EA+E+F
Sbjct: 169 SSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAA 228
Query: 291 KI--KPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLD 348
+ ++ +L S+++ C+++G L G+ H V R + + V+ T+L+DMY KCG L
Sbjct: 229 LTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLS 288
Query: 349 MAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACA 408
A ++F +++ V ++ +MI A HG E A+KLF +M + PN VT +GVL+AC+
Sbjct: 289 CAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACS 348
Query: 409 HAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPV--KPNVA 466
H+G+V GL + M Y + P+ H+ CVVD+LGR G V+EA + +++ V +
Sbjct: 349 HSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGAL 408
Query: 467 VWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMK 526
+WGALL+A R+HG VE+ L+ + + Y LSN YA +G W+D +R MK
Sbjct: 409 LWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMK 468
Query: 527 ERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGY------SPN 580
G S ++ V+ F GD S + EI L+ + +++ G+
Sbjct: 469 RSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSSMITT 528
Query: 581 TSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFKLVSK 640
+S V D++EE K+ ++ H E++ALA+GLLH G+T+ I+ NLR+C DCH AFKL+S+
Sbjct: 529 SSSVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISE 588
Query: 641 IYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
I I++RD R+H FKNG C+C+D+W
Sbjct: 589 IVEREIVVRDVNRFHCFKNGSCTCRDYW 616
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 126/300 (42%), Gaps = 28/300 (9%)
Query: 1 MSTTATNFPSGLKPIEL--SSDQAPSSKLSQKTVLDILNKKC--FHSLQHLKQAHAIILK 56
M T G + IEL S + A +S + + +L + C LQ K AH ++ +
Sbjct: 205 MITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTR 264
Query: 57 TAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAI 116
+ + V+ +LL YA + + A K+F I +V + ++G A+
Sbjct: 265 GGYESNTVVATSLLDMYAKCG--SLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAV 322
Query: 117 SCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVV-KQGLTGDVHIKSAGIQM 175
+ +M+ PN T + AC+ +G V EG+++ + + K G+ D + + M
Sbjct: 323 KLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDM 382
Query: 176 YASFGLFREARKMLD--ESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKN---V 230
FG EA ++ E G Q ++ W A++ G VE +E + N
Sbjct: 383 LGRFGRVDEAYELAKTIEVGAEQGALL-WGALLSAGRLHGRVEIVSEASKRLIQSNQQVT 441
Query: 231 GSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCF-----KEALEVFH 285
++ A+ + A G E++ +L EM G +K+R K+++ VFH
Sbjct: 442 SAYIALSNAYAVSGGWEDSESLRLEMKR----------SGNVKERACSWIENKDSVYVFH 491
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 304 bits (779), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 187/592 (31%), Positives = 308/592 (52%), Gaps = 53/592 (8%)
Query: 42 HSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNI 101
H L+ Q H+II+K + FV L+ YA A ++F+ + + N
Sbjct: 442 HDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKC--GALEDARQIFERMCDRDNVTWNT 499
Query: 102 YLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQG 161
+ +++ +A + +M + + + KAC + +G Q H VK G
Sbjct: 500 IIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCG 559
Query: 162 LTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEV 221
L D+H S+ I MY+ G+ ++ARK+ S + V+ NA+I GY + +E A +
Sbjct: 560 LDRDLHTGSSLIDMYSKCGIIKDARKVF--SSLPEWSVVSMNALIAGYSQ-NNLEEAVVL 616
Query: 222 FVNMPDKNVG-----------------------SWNAMIS-----------GLARCGMIE 247
F M + V ++ I+ G++ GM
Sbjct: 617 FQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYM 676
Query: 248 NAR------TLFDEMGERDEIS-WSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLP 300
N+R LF E+ I W+ ++ G+ + ++EAL+ + +M+ + + P +
Sbjct: 677 NSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFV 736
Query: 301 SMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR 360
++L VC+ + SL +GR IHS + + +D + LIDMY KCG + + +VF++M+ R
Sbjct: 737 TVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRR 796
Query: 361 E-VSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGL 419
V +WN++I G A +G AEDA+K+F M P+ +TF+GVL AC+HAG V G +
Sbjct: 797 SNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKI 856
Query: 420 FNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHG 479
F M Y IE ++H C+VDLLGR G ++EA+ FIE+ +KP+ +W +LL ACRIHG
Sbjct: 857 FEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHG 916
Query: 480 NVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMM 539
+ GE L+++EP+NS Y LLSNIYA G W+ +RK+M++RG++ VPG S +
Sbjct: 917 DDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWI 976
Query: 540 DMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEE 591
D+ + H F GD SH ++ +I + LE + D ++ + ++V+ DI E+
Sbjct: 977 DVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMK------DDAVVNPDIVEQ 1022
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 199/397 (50%), Gaps = 9/397 (2%)
Query: 82 TLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKAC 141
+ A K FD + + +V N L G+P K + + + PNKFT+ + C
Sbjct: 112 SYAEKQFDFLEK-DVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTC 170
Query: 142 AVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVIC 201
A +V+ G Q H ++K GL + + A + MYA +AR++ + + +C
Sbjct: 171 ARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFE--WIVDPNTVC 228
Query: 202 WNAMIDGYLKCGEVEAANEVFVNMPDK----NVGSWNAMISGLARCGMIENARTLFDEMG 257
W + GY+K G E A VF M D+ + ++ +I+ R G +++AR LF EM
Sbjct: 229 WTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS 288
Query: 258 ERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRW 317
D ++W+ +I G+ K+ C A+E F M++ +K +R L S+L+ V +LD G
Sbjct: 289 SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLV 348
Query: 318 IHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGR 377
+H+ + + + +G++L+ MY KC +++ A +VFE ++ + WNAMI G A +G
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGE 408
Query: 378 AEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFG 437
+ M+LF M + TF +L+ CA + +E G F+S+ ++ +
Sbjct: 409 SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMG-SQFHSIIIKKKLAKNLFVGN 467
Query: 438 CVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNA 474
+VD+ + G +E+A + E M + NV W ++ +
Sbjct: 468 ALVDMYAKCGALEDARQIFERMCDRDNV-TWNTIIGS 503
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/485 (22%), Positives = 198/485 (40%), Gaps = 81/485 (16%)
Query: 15 IELSSDQAPSSKLSQKTVLDILNKKCFHSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYA 74
+ L +Q +K + VL ++ +++ +Q H ++K + + G L+ YA
Sbjct: 149 VSLFENQIFPNKFTFSIVLSTCARET--NVEFGRQIHCSMIKMGLERNSYCGGALVDMYA 206
Query: 75 NPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTY 134
+ + A +VF+ I PN G ++ G P +A+ + +M RP+ +
Sbjct: 207 KCD--RISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAF 264
Query: 135 PTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGK 194
T+ I Y G ++AR + E
Sbjct: 265 VTV-----------------------------------INTYIRLGKLKDARLLFGE--M 287
Query: 195 TQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSW--------------------- 233
+ DV+ WN MI G+ K G A E F NM +V S
Sbjct: 288 SSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGL 347
Query: 234 ------------------NAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQR 275
++++S ++C +E A +F+ + E++++ W+A+I GY
Sbjct: 348 VVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNG 407
Query: 276 CFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGT 335
+ +E+F M+ S+L+ CA L+ G HS + + + + +G
Sbjct: 408 ESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGN 467
Query: 336 ALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKP 395
AL+DMY KCG L+ A ++FE+M R+ TWN +IG +A LF +MN
Sbjct: 468 ALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVS 527
Query: 396 NGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKF 455
+G L AC H + +G + + + ++ ++ ++D+ + G++++A K
Sbjct: 528 DGACLASTLKACTHVHGLYQGKQV-HCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKV 586
Query: 456 IESMP 460
S+P
Sbjct: 587 FSSLP 591
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 152/330 (46%), Gaps = 41/330 (12%)
Query: 203 NAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEI 262
NA++D Y KC +V A + F + +K+V +WN+M+S ++ +G+ ++
Sbjct: 99 NAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSMLS-------------MYSSIGKPGKV 144
Query: 263 SWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFV 322
L F + +I P++ +L+ CA +++ GR IH +
Sbjct: 145 ------------------LRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSM 186
Query: 323 ERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAM 382
+ ++ ++ G AL+DMY KC R+ A VFE + W + G G E+A+
Sbjct: 187 IKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAV 246
Query: 383 KLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDL 442
+F +M E +P+ + FV V+N G ++ LF M P++ + ++
Sbjct: 247 LVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS-----SPDVVAWNVMISG 301
Query: 443 LGRAGLVEEAEKFIESM---PVKPNVAVWGALLNACRIHGNVELGERVGWILLDME-PRN 498
G+ G A ++ +M VK + G++L+A I N++LG V + + N
Sbjct: 302 HGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASN 361
Query: 499 SGRYALLSNIYAKAGRWDDVARVRKLMKER 528
+ L ++Y+K + + A+V + ++E+
Sbjct: 362 IYVGSSLVSMYSKCEKMEAAAKVFEALEEK 391
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 136/292 (46%), Gaps = 17/292 (5%)
Query: 25 SKLSQKTVLDILNKKCFHSLQHLKQAHAIILKTAHFHD-HFVSGTLLKCYANPNFNNFTL 83
S+++ T+++ +K SL Q H I K + ++ +LL Y N T
Sbjct: 628 SEITFATIVEACHKP--ESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSR--GMTE 683
Query: 84 ATKVFDCIPRP-NVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACA 142
A +F + P ++ + + G +NG +A+ Y +M P++ T+ T+ + C+
Sbjct: 684 ACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCS 743
Query: 143 VTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICW 202
V S++EG H+ + D + I MYA G + + ++ DE + +++V+ W
Sbjct: 744 VLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEM-RRRSNVVSW 802
Query: 203 NAMIDGYLKCGEVEAANEVFVNMPDKNVG----SWNAMISGLARCGMIENARTLFDEM-- 256
N++I+GY K G E A ++F +M ++ ++ +++ + G + + R +F+ M
Sbjct: 803 NSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIG 862
Query: 257 --GERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVC 306
G + A + + + + + + F ++ + +KP L S+L C
Sbjct: 863 QYGIEARVDHVACMVDLLGRWGYLQEADDF--IEAQNLKPDARLWSSLLGAC 912
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 14/213 (6%)
Query: 311 SLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIG 370
+L G+ +HS I + LG A++D+Y KC ++ A + F+ ++ ++V+ WN+M+
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLS 133
Query: 371 GLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIE 430
+ G+ ++ F + + PN TF VL+ CA VE G + SM ++ +E
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKM-GLE 192
Query: 431 PEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWI 490
G +VD+ + + +A + E + V PN W C G V+ G +
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWI-VDPNTVCW-----TCLFSGYVKAGLPEEAV 246
Query: 491 LLDMEPRNSGR------YALLSNIYAKAGRWDD 517
L+ R+ G + + N Y + G+ D
Sbjct: 247 LVFERMRDEGHRPDHLAFVTVINTYIRLGKLKD 279
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 303 bits (777), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 154/386 (39%), Positives = 231/386 (59%), Gaps = 4/386 (1%)
Query: 185 ARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCG 244
AR+ D S + D++ WN MI GY++ G + A +F MP ++V SWN ++ G A G
Sbjct: 78 ARRYFDLS--PERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIG 135
Query: 245 MIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQRE-KIKPSRHLLPSML 303
+E +FD+M ER+ SW+ +I GY + E L F +M E + P+ + +L
Sbjct: 136 DMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVL 195
Query: 304 TVCANVGSLDQGRWIHSFVERNSI-QVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREV 362
+ CA +G+ D G+W+H + E +VD + ALIDMY KCG +++A EVF+ +K R++
Sbjct: 196 SACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDL 255
Query: 363 STWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNS 422
+WN MI GLA HG +A+ LF +M P+ VTFVGVL AC H G+VE GL FNS
Sbjct: 256 ISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNS 315
Query: 423 MKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVE 482
M + I PE+EH GCVVDLL RAG + +A +FI MPVK + +W LL A +++ V+
Sbjct: 316 MFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVD 375
Query: 483 LGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMG 542
+GE L+ +EPRN + +LSNIY AGR+DD AR++ M++ G + G S ++
Sbjct: 376 IGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETD 435
Query: 543 GKVHEFKMGDSSHPQMKEIYLMLEKM 568
+ +F HP+ +E+ +L ++
Sbjct: 436 DGLVKFYSSGEKHPRTEELQRILREL 461
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 142/350 (40%), Gaps = 75/350 (21%)
Query: 68 TLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNS 127
T+L+ YAN + +VFD +P NVF N +KG +NG + + + +M+ S
Sbjct: 126 TVLEGYAN--IGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGS 183
Query: 128 R-PNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREAR 186
PN T + ACA G+ F +V K G T
Sbjct: 184 VVPNDATMTLVLSACAKLGAF----DFGKWVHKYGET----------------------- 216
Query: 187 KMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMI 246
G + DV NA+ID Y KCG +E A EVF + +++ SWN MI+GLA G
Sbjct: 217 -----LGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGH- 270
Query: 247 ENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVC 306
EAL +FH+M+ I P + +L C
Sbjct: 271 ------------------------------GTEALNLFHEMKNSGISPDKVTFVGVLCAC 300
Query: 307 ANVGSLDQG-RWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR-EVST 364
++G ++ G + +S SI + ++D+ + G L A E KM V+ +
Sbjct: 301 KHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVI 360
Query: 365 WNAMIGGLAIHGR---AEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAG 411
W ++G ++ + E A++ K+ E R P FV + N AG
Sbjct: 361 WATLLGASKVYKKVDIGEVALEELIKL--EPRNP--ANFVMLSNIYGDAG 406
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 117/268 (43%), Gaps = 41/268 (15%)
Query: 213 GEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYI 272
G + +AN+VF M +KNV W +MI+G + +AR FD ERD + W+ +I GYI
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYI 101
Query: 273 KQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAV 332
+ EA +F QM P R ++ W
Sbjct: 102 EMGNMLEARSLFDQM------PCRDVMS----------------W--------------- 124
Query: 333 LGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEK 392
+++ Y G ++ VF+ M R V +WN +I G A +GR + + F +M E
Sbjct: 125 --NTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEG 182
Query: 393 R-KPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEE 451
PN T VL+ACA G + G + + + + ++ ++D+ G+ G +E
Sbjct: 183 SVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEI 242
Query: 452 AEKFIESMPVKPNVAVWGALLNACRIHG 479
A + + + + ++ W ++N HG
Sbjct: 243 AMEVFKGIK-RRDLISWNTMINGLAAHG 269
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 303 bits (776), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 160/492 (32%), Positives = 272/492 (55%), Gaps = 3/492 (0%)
Query: 84 ATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVL-NSRPNKFTYPTLFKACA 142
A +FD + NV + G + G + +M + + N T +FKAC
Sbjct: 227 ARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACR 286
Query: 143 VTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICW 202
+EG Q H V + L D+ + ++ + MY+ G EA+ + D + W
Sbjct: 287 DFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGV--MKNKDSVSW 344
Query: 203 NAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEI 262
N++I G ++ ++ A E+F MP K++ SW MI G + G I LF M E+D I
Sbjct: 345 NSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNI 404
Query: 263 SWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFV 322
+W+A+I ++ ++EAL FH+M ++++ P+ + S+L+ A++ L +G IH V
Sbjct: 405 TWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRV 464
Query: 323 ERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAM 382
+ +I D + +L+ MY KCG + A+++F + + ++N MI G + +G + A+
Sbjct: 465 VKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKAL 524
Query: 383 KLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDL 442
KLF+ + ++PNGVTF+ +L+AC H G V+ G F SMK Y IEP +H+ C+VDL
Sbjct: 525 KLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDL 584
Query: 443 LGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRY 502
LGR+GL+++A I +MP KP+ VWG+LL+A + H V+L E L+++EP ++ Y
Sbjct: 585 LGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPY 644
Query: 503 ALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIY 562
+LS +Y+ G+ D R+ + K + I+ PGSS + + G+VH F GD S ++EI
Sbjct: 645 VVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEIG 704
Query: 563 LMLEKMMDKLQI 574
L+ + ++++
Sbjct: 705 FTLKMIRKEMEL 716
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 192/403 (47%), Gaps = 41/403 (10%)
Query: 173 IQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGS 232
I + G F EA + E+ D + N ++ GYL+ G+ A VF M K V S
Sbjct: 151 ITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVS 210
Query: 233 WNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQRE-K 291
++M+ G + G I +AR+LFD M ER+ I+W+A+IDGY K F++ +F +M++E
Sbjct: 211 CSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGD 270
Query: 292 IKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAW 351
+K + + L M C + +G IH V R ++ D LG +L+ MY K G + A
Sbjct: 271 VKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAK 330
Query: 352 EVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAG 411
VF MK ++ +WN++I GL + +A +LF KM G+ + V++ ++ + G
Sbjct: 331 AVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGK----DMVSWTDMIKGFSGKG 386
Query: 412 MVERGLGLFNSMKRVYEIEPEMEH--FGCVVDLLGRAGLVEEAEKFIESMPVK---PNVA 466
+ + + LF M PE ++ + ++ G EEA + M K PN
Sbjct: 387 EISKCVELFGMM-------PEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSY 439
Query: 467 VWGALLNAC----------RIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWD 516
+ ++L+A +IHG V I+ D+ +NS L ++Y K G +
Sbjct: 440 TFSSVLSATASLADLIEGLQIHGRVVKMN----IVNDLSVQNS-----LVSMYCKCGNTN 490
Query: 517 DVARVRKLMKERGIET----VPGSSMMDMGGKVHE-FKMGDSS 554
D ++ + E I + + G S G K + F M +SS
Sbjct: 491 DAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESS 533
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 121/238 (50%), Gaps = 15/238 (6%)
Query: 191 ESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENAR 250
E+ T T + N+ I + + G ++ A +F M ++++ SW AMIS A G + A
Sbjct: 42 ETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAW 101
Query: 251 TLFDEMGERDEISWSAIIDGYIKQRC-FKEALEVFHQMQREKIKPSRHLL--PSMLTVCA 307
+FDEM R S++A+I IK +C +A E+F + P ++ + +M+T
Sbjct: 102 QVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDI------PEKNAVSYATMITGFV 155
Query: 308 NVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNA 367
G D+ ++++ E D+V L+ Y++ G+ + A VF+ M V+EV + ++
Sbjct: 156 RAGRFDEAEFLYA--ETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSS 213
Query: 368 MIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKR 425
M+ G GR DA LF +M + N +T+ +++ AG E G GLF M++
Sbjct: 214 MVHGYCKMGRIVDARSLFDRMT----ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQ 267
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 300 bits (769), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 181/586 (30%), Positives = 305/586 (52%), Gaps = 47/586 (8%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSI 107
+QAHA+++K + F D +V +L+ Y L KVF +P N + + + G
Sbjct: 138 RQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGL--KVFAYMPERNTYTWSTMVSGYA 195
Query: 108 ENGEPHKAISCYHKMMVLNSR--PNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGD 165
G +AI ++ + + + + + + A T V G Q H +K GL G
Sbjct: 196 TRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGF 255
Query: 166 VHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM 225
V + +A + MY+ EA KM D SG + I W+AM+ GY + GE A ++F M
Sbjct: 256 VALSNALVTMYSKCESLNEACKMFDSSGDRNS--ITWSAMVTGYSQNGESLEAVKLFSRM 313
Query: 226 ------P---------------------------------DKNVGSWNAMISGLARCGMI 246
P ++++ + A++ A+ G +
Sbjct: 314 FSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCL 373
Query: 247 ENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVC 306
+AR FD + ERD W+++I GY++ +EAL ++ +M+ I P+ + S+L C
Sbjct: 374 ADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKAC 433
Query: 307 ANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWN 366
+++ +L+ G+ +H ++ ++ +G+AL MY KCG L+ VF + ++V +WN
Sbjct: 434 SSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWN 493
Query: 367 AMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRV 426
AMI GL+ +G+ ++A++LF +M E +P+ VTFV +++AC+H G VERG FN M
Sbjct: 494 AMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQ 553
Query: 427 YEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGER 486
++P+++H+ C+VDLL RAG ++EA++FIES + + +W LL+AC+ HG ELG
Sbjct: 554 IGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVY 613
Query: 487 VGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVH 546
G L+ + R S Y LS IY GR DV RV K M+ G+ G S +++ + H
Sbjct: 614 AGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYH 673
Query: 547 EFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEE 592
F +GD+ HP ++E ++ + ++ EG+ T + S +EEEE
Sbjct: 674 VFVVGDTMHPMIEETKDLVCLVSRQMIEEGFV--TVLDSSFVEEEE 717
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 177/396 (44%), Gaps = 71/396 (17%)
Query: 84 ATKVFDCIPRPNVFVCNIYLKGSIENG---EPHKAISCYHKMMVLNSRPNKFTYPTLFKA 140
A +F+ I +V N + G +NG + + + +M + PN +T +FKA
Sbjct: 68 AHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKA 127
Query: 141 CAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVI 200
+ S G Q HA VVK GD+++ ++ + MY
Sbjct: 128 ESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYC----------------------- 164
Query: 201 CWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERD 260
K G VE +VF MP++N +W+ M+SG A G +E
Sbjct: 165 ----------KAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVE------------- 201
Query: 261 EISWSAIIDGYIKQRCFKEALEVFHQMQREKIK--PSRHLLPSMLTVCANVGSLDQGRWI 318
EA++VF+ REK + S ++ ++L+ A + GR I
Sbjct: 202 ------------------EAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQI 243
Query: 319 HSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRA 378
H +N + L AL+ MY KC L+ A ++F+ R TW+AM+ G + +G +
Sbjct: 244 HCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGES 303
Query: 379 EDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGC 438
+A+KLF++M KP+ T VGVLNAC+ +E G L + + ++ E +
Sbjct: 304 LEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKL-GFERHLFATTA 362
Query: 439 VVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNA 474
+VD+ +AG + +A K + + + +VA+W +L++
Sbjct: 363 LVDMYAKAGCLADARKGFDCLQER-DVALWTSLISG 397
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 152/336 (45%), Gaps = 39/336 (11%)
Query: 234 NAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEA---LEVFHQMQRE 290
N +++ A+CG + A ++F+ + +D +SW+++I GY + + +++F +M+ +
Sbjct: 53 NVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQ 112
Query: 291 KIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMA 350
I P+ + L + +++ S GR H+ V + S D + T+L+ MY K G ++
Sbjct: 113 DILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDG 172
Query: 351 WEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRK--PNGVTFVGVLNACA 408
+VF M R TW+ M+ G A GR E+A+K+F EK + + F VL++ A
Sbjct: 173 LKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLA 232
Query: 409 -----------HAGMVERGL----GLFNSMKRVYEIEPEMEH---------------FGC 438
H ++ GL L N++ +Y + +
Sbjct: 233 ATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSA 292
Query: 439 VVDLLGRAGLVEEAEKFIESM---PVKPNVAVWGALLNACRIHGNVELGERVGWILLDME 495
+V + G EA K M +KP+ +LNAC +E G+++ LL +
Sbjct: 293 MVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLG 352
Query: 496 -PRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGI 530
R+ L ++YAKAG D + ++ER +
Sbjct: 353 FERHLFATTALVDMYAKAGCLADARKGFDCLQERDV 388
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 155/376 (41%), Gaps = 51/376 (13%)
Query: 8 FPSGLKPIELSSDQAPSSKLSQKTVLDILN---KKCFHSLQHLKQAHAIILKTAHFHDHF 64
F +G+KP S+ T++ +LN C+ L+ KQ H+ +LK F
Sbjct: 314 FSAGIKP-------------SEYTIVGVLNACSDICY--LEEGKQLHSFLLKLGFERHLF 358
Query: 65 VSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMV 124
+ L+ YA A K FDC+ +V + + G ++N + +A+ Y +M
Sbjct: 359 ATTALVDMYAKAGC--LADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKT 416
Query: 125 LNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFRE 184
PN T ++ KAC+ +++ G Q H +K G +V I SA MY+ G +
Sbjct: 417 AGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLED 476
Query: 185 ARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM------PDKNVGSWNAMIS 238
+ + DV+ WNAMI G G+ + A E+F M PD ++ +IS
Sbjct: 477 GNLVFRRT--PNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDV--TFVNIIS 532
Query: 239 GLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREK------- 291
+ G +E F+ M D+I +D Y C + L Q++ K
Sbjct: 533 ACSHKGFVERGWFYFNMMS--DQIGLDPKVDHY---ACMVDLLSRAGQLKEAKEFIESAN 587
Query: 292 IKPSRHLLPSMLTVCANVGSLDQGRW----IHSFVERNSIQVDAVLGTALIDMYVKCGRL 347
I L +L+ C N G + G + + + R S + G +Y GR+
Sbjct: 588 IDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSG-----IYTALGRM 642
Query: 348 DMAWEVFEKMKVREVS 363
V++ M+ VS
Sbjct: 643 RDVERVWKHMRANGVS 658
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 102/243 (41%), Gaps = 25/243 (10%)
Query: 289 REKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLD 348
+ ++ P L LT + +L GR +H + R L++ Y KCG+L
Sbjct: 7 QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLA 66
Query: 349 MAWEVFEKMKVREVSTWNAMIGGLAIHG---RAEDAMKLFTKMNGEKRKPNGVTFVGVLN 405
A +F + ++V +WN++I G + +G + M+LF +M + PN T G+
Sbjct: 67 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126
Query: 406 ACAHAGMVERGLGLFNSMKRVYEIEPEMEHFG------CVVDLLGRAGLVEEAEKFIESM 459
A E L ++ + + +M FG +V + +AGLVE+ K M
Sbjct: 127 A-------ESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYM 179
Query: 460 PVKPNVAVWGALLNACRIHGNVELGERV-GWILLDMEPRNSGRY-------ALLSNIYAK 511
P + N W +++ G VE +V L + E + Y +L + IY
Sbjct: 180 PER-NTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVG 238
Query: 512 AGR 514
GR
Sbjct: 239 LGR 241
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 184/604 (30%), Positives = 305/604 (50%), Gaps = 65/604 (10%)
Query: 49 QAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIE 108
Q HA LK+ D V L YA + N A +FD N N + G +
Sbjct: 302 QLHAHALKSDFAADGIVRTATLDMYAKCD--NMQDAQILFDNSENLNRQSYNAMITGYSQ 359
Query: 109 NGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHI 168
KA+ +H++M ++ + +F+ACA+ + EG+Q + +K L+ DV +
Sbjct: 360 EEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCV 419
Query: 169 KSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM--- 225
+A I MY EA ++ DE + D + WNA+I + + G+ +FV+M
Sbjct: 420 ANAAIDMYGKCQALAEAFRVFDE--MRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS 477
Query: 226 ---PDK--------------------------------NVGSWNAMISGLARCGMIENAR 250
PD+ N ++I ++CGMIE A
Sbjct: 478 RIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAE 537
Query: 251 TLFDEMGERDEIS--------------------WSAIIDGYIKQRCFKEALEVFHQMQRE 290
+ +R +S W++II GY+ + ++A +F +M
Sbjct: 538 KIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEM 597
Query: 291 KIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMA 350
I P + ++L CAN+ S G+ IH+ V + +Q D + + L+DMY KCG L +
Sbjct: 598 GITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDS 657
Query: 351 WEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHA 410
+FEK R+ TWNAMI G A HG+ E+A++LF +M E KPN VTF+ +L ACAH
Sbjct: 658 RLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHM 717
Query: 411 GMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGA 470
G++++GL F MKR Y ++P++ H+ +VD+LG++G V+ A + I MP + + +W
Sbjct: 718 GLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRT 777
Query: 471 LLNACRIH-GNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERG 529
LL C IH NVE+ E LL ++P++S Y LLSN+YA AG W+ V+ +R+ M+
Sbjct: 778 LLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFK 837
Query: 530 IETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIE 589
++ PG S +++ ++H F +GD +HP+ +EIY L + +++ + ++ + ++E
Sbjct: 838 LKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMK--PFDDSSFVRGVEVE 895
Query: 590 EEEK 593
EE++
Sbjct: 896 EEDQ 899
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 128/517 (24%), Positives = 225/517 (43%), Gaps = 84/517 (16%)
Query: 49 QAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIE 108
Q H I+++ D + LL YA F + +VF IP N + + G ++
Sbjct: 201 QIHGIVVRVGCDTDVVAASALLDMYAKGK--RFVESLRVFQGIPEKNSVSWSAIIAGCVQ 258
Query: 109 NGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHI 168
N A+ + +M +N+ ++ Y ++ ++CA ++ G Q HA +K D +
Sbjct: 259 NNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIV 318
Query: 169 KSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLK----------------- 211
++A + MYA ++A+ + D S +NAMI GY +
Sbjct: 319 RTATLDMYAKCDNMQDAQILFDNSENLNRQ--SYNAMITGYSQEEHGFKALLLFHRLMSS 376
Query: 212 ---------------CGEVEAANE-------VFVNMPDKNVGSWNAMISGLARCGMIENA 249
C V+ +E + +V NA I +C + A
Sbjct: 377 GLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEA 436
Query: 250 RTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANV 309
+FDEM RD +SW+AII + + E L +F M R +I+P S+L C
Sbjct: 437 FRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG- 495
Query: 310 GSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMA----------------WEV 353
GSL G IHS + ++ + ++ +G +LIDMY KCG ++ A E
Sbjct: 496 GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEE 555
Query: 354 FEKMKVREVS----TWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAH 409
EKM + + +WN++I G + ++EDA LFT+M P+ T+ VL+ CA+
Sbjct: 556 LEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCAN 615
Query: 410 AGMVERGLGLFNSMKRVY------EIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKP 463
+ GLG K+++ E++ ++ +VD+ + G + ++ E ++
Sbjct: 616 --LASAGLG-----KQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEK-SLRR 667
Query: 464 NVAVWGALLNACRIHGN----VELGERVGWILLDMEP 496
+ W A++ HG ++L ER+ IL +++P
Sbjct: 668 DFVTWNAMICGYAHHGKGEEAIQLFERM--ILENIKP 702
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 123/495 (24%), Positives = 213/495 (43%), Gaps = 78/495 (15%)
Query: 43 SLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNV------ 96
+L+ KQAHA ++ + FV LL+ Y N +F A+ VFD +P +V
Sbjct: 63 ALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSR--DFVSASMVFDKMPLRDVVSWNKM 120
Query: 97 ----------FVCNIY---------------LKGSIENGEPHKAISCYHKMMVLNSRPNK 131
F N + L G ++NGE K+I + M +
Sbjct: 121 INGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDG 180
Query: 132 FTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDE 191
T+ + K C+ G+Q H VV+ G DV SA + MYA F E+ ++
Sbjct: 181 RTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVF-- 238
Query: 192 SGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGL----------- 240
G + + + W+A+I G ++ + A + F M N G ++ + +
Sbjct: 239 QGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELR 298
Query: 241 ----------------------------ARCGMIENARTLFDEMGERDEISWSAIIDGYI 272
A+C +++A+ LFD + S++A+I GY
Sbjct: 299 LGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYS 358
Query: 273 KQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAV 332
++ +AL +FH++ + L + CA V L +G I+ ++S+ +D
Sbjct: 359 QEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVC 418
Query: 333 LGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEK 392
+ A IDMY KC L A+ VF++M+ R+ +WNA+I +G+ + + LF M +
Sbjct: 419 VANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSR 478
Query: 393 RKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGC-VVDLLGRAGLVEE 451
+P+ TF +L AC G + G+ + +S+ V GC ++D+ + G++EE
Sbjct: 479 IEPDEFTFGSILKACT-GGSLGYGMEIHSSI--VKSGMASNSSVGCSLIDMYSKCGMIEE 535
Query: 452 AEKFIESMPVKPNVA 466
AEK + NV+
Sbjct: 536 AEKIHSRFFQRANVS 550
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 174/413 (42%), Gaps = 78/413 (18%)
Query: 134 YPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDE-- 191
+ +FK CA G+++ G Q HA ++ G + + +Q+Y + F A + D+
Sbjct: 51 FSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMP 110
Query: 192 -----------SGKTQT----------------DVICWNAMIDGYLKCGEVEAANEVFVN 224
+G +++ DV+ WN+M+ GYL+ GE + EVFV+
Sbjct: 111 LRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVD 170
Query: 225 MP---------------------------------------DKNVGSWNAMISGLARCGM 245
M D +V + +A++ A+
Sbjct: 171 MGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKR 230
Query: 246 IENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTV 305
+ +F + E++ +SWSAII G ++ AL+ F +MQ+ S+ + S+L
Sbjct: 231 FVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRS 290
Query: 306 CANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTW 365
CA + L G +H+ ++ D ++ TA +DMY KC + A +F+ + ++
Sbjct: 291 CAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSY 350
Query: 366 NAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKR 425
NAMI G + A+ LF ++ + ++ GV ACA + GL ++
Sbjct: 351 NAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYG---- 406
Query: 426 VYEIEPEMEHFGCV----VDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNA 474
I+ + CV +D+ G+ + EA + + M + V+ W A++ A
Sbjct: 407 -LAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVS-WNAIIAA 457
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 111/257 (43%), Gaps = 33/257 (12%)
Query: 271 YIKQRCFKE-ALEVFHQMQREKI----KPSRHLLPSMLTVCANVGSLDQGRWIHSFVERN 325
++ + C K+ ALE+ Q I +P+ +L +L V N S V
Sbjct: 53 FVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSA----SMVFDK 108
Query: 326 SIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLF 385
D V +I+ Y K + A F M VR+V +WN+M+ G +G + ++++F
Sbjct: 109 MPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVF 168
Query: 386 TKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGR 445
M E + +G TF +L C+ G+ + + RV GC D++
Sbjct: 169 VDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRV----------GCDTDVVAA 218
Query: 446 AGLVE---EAEKFIESMPV-----KPNVAVWGALLNACRIHGNVELGERVGWILLDMEPR 497
+ L++ + ++F+ES+ V + N W A++ C + + L + +M+
Sbjct: 219 SALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALK---FFKEMQKV 275
Query: 498 NSGRYALLSNIYAKAGR 514
N+G + +IYA R
Sbjct: 276 NAG---VSQSIYASVLR 289
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 101/232 (43%), Gaps = 10/232 (4%)
Query: 26 KLSQKTVLDILNKKCFHSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLAT 85
K + TVLD L KQ HA ++K D ++ TL+ Y+ + +
Sbjct: 603 KFTYATVLDTCANLASAGLG--KQIHAQVIKKELQSDVYICSTLVDMYSKCG--DLHDSR 658
Query: 86 KVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTG 145
+F+ R + N + G +G+ +AI + +M++ N +PN T+ ++ +ACA G
Sbjct: 659 LMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMG 718
Query: 146 SVKEGVQFHAFVVKQ-GLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNA 204
+ +G+++ + + GL + S + + G + A +++ E DVI W
Sbjct: 719 LIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVI-WRT 777
Query: 205 MID-GYLKCGEVEAANE---VFVNMPDKNVGSWNAMISGLARCGMIENARTL 252
++ + VE A E + + ++ ++ + + A GM E L
Sbjct: 778 LLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDL 829
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 173/488 (35%), Positives = 262/488 (53%), Gaps = 39/488 (7%)
Query: 58 AHFHDHFVSGT--LLKCYAN--PNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPH 113
AH HF+ G+ LL + + + +N A +VF I PNV V N +K G P
Sbjct: 25 AHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPL 84
Query: 114 KAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGI 173
+++S + M +++TY L K+C+ ++ G H +++ G I+ +
Sbjct: 85 ESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVV 144
Query: 174 QMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSW 233
++Y S G +A+K+ DE M ++NV W
Sbjct: 145 ELYTSGGRMGDAQKVFDE---------------------------------MSERNVVVW 171
Query: 234 NAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIK 293
N MI G G +E LF +M ER +SW+++I K +EALE+F +M +
Sbjct: 172 NLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFD 231
Query: 294 PSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAV-LGTALIDMYVKCGRLDMAWE 352
P + ++L + A++G LD G+WIHS E + + D + +G AL+D Y K G L+ A
Sbjct: 232 PDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATA 291
Query: 353 VFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGE-KRKPNGVTFVGVLNACAHAG 411
+F KM+ R V +WN +I G A++G+ E + LF M E K PN TF+GVL C++ G
Sbjct: 292 IFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTG 351
Query: 412 MVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGAL 471
VERG LF M +++E EH+G +VDL+ R+G + EA KF+++MPV N A+WG+L
Sbjct: 352 QVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSL 411
Query: 472 LNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIE 531
L+ACR HG+V+L E L+ +EP NSG Y LLSN+YA+ GRW DV +VR LMK+ +
Sbjct: 412 LSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLR 471
Query: 532 TVPGSSMM 539
G S +
Sbjct: 472 KSTGQSTI 479
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 299 bits (766), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 165/496 (33%), Positives = 266/496 (53%), Gaps = 36/496 (7%)
Query: 84 ATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAV 143
A VFD +P +V N + G ++G H+A+ Y + + N+F++ L AC
Sbjct: 132 ARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVK 191
Query: 144 TGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWN 203
+ ++ Q H V+ G ++V+
Sbjct: 192 SRQLQLNRQAHGQVLVAGFL---------------------------------SNVVLSC 218
Query: 204 AMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEIS 263
++ID Y KCG++E+A F M K++ W +ISG A+ G +E A LF EM E++ +S
Sbjct: 219 SIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVS 278
Query: 264 WSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVE 323
W+A+I GY++Q AL++F +M +KP + S L A++ SL G+ IH ++
Sbjct: 279 WTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMI 338
Query: 324 RNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR-EVSTWNAMIGGLAIHGRAEDAM 382
R +++ +A++ ++LIDMY K G L+ + VF + + WN MI LA HG A+
Sbjct: 339 RTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKAL 398
Query: 383 KLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDL 442
++ M + +PN T V +LNAC+H+G+VE GL F SM + I P+ EH+ C++DL
Sbjct: 399 RMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDL 458
Query: 443 LGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRY 502
LGRAG +E + IE MP +P+ +W A+L CRIHGN ELG++ L+ ++P +S Y
Sbjct: 459 LGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPY 518
Query: 503 ALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMK--E 560
LLS+IYA G+W+ V ++R +MK+R + S +++ KV F + D SH + E
Sbjct: 519 ILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEE 578
Query: 561 IYLMLEKMMDKLQIEG 576
IY +L + ++ E
Sbjct: 579 IYFILHNLAAVIEEEA 594
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 150/304 (49%), Gaps = 8/304 (2%)
Query: 187 KMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMI 246
+ L +G + + + N +I Y+KCG+ A +VF M +N+ SWN M+SG + GM+
Sbjct: 70 RHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGML 129
Query: 247 ENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVC 306
AR +FD M ERD +SW+ ++ GY + EAL + + +R IK + +LT C
Sbjct: 130 VRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTAC 189
Query: 307 ANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWN 366
L R H V + VL ++ID Y KCG+++ A F++M V+++ W
Sbjct: 190 VKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWT 249
Query: 367 AMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRV 426
+I G A G E A KLF +M + N V++ ++ G R L LF M +
Sbjct: 250 TLISGYAKLGDMEAAEKLFCEMP----EKNPVSWTALIAGYVRQGSGNRALDLFRKMIAL 305
Query: 427 YEIEPEMEHF-GCVVDLLGRAGLV--EEAEKFIESMPVKPNVAVWGALLNACRIHGNVEL 483
++PE F C+ A L +E ++ V+PN V +L++ G++E
Sbjct: 306 -GVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEA 364
Query: 484 GERV 487
ERV
Sbjct: 365 SERV 368
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 139/344 (40%), Gaps = 45/344 (13%)
Query: 277 FKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQ-VDAVLGT 335
+A+ + ++ I+ LL S+L C + SL QG+WIH ++ + + +L
Sbjct: 27 LSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSN 86
Query: 336 ALIDMYVKCGR-------------------------------LDMAWEVFEKMKVREVST 364
LI MY+KCG+ L A VF+ M R+V +
Sbjct: 87 HLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVS 146
Query: 365 WNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMK 424
WN M+ G A G +A+ + + K N +F G+L AC + R L L
Sbjct: 147 WNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKS----RQLQLNRQAH 202
Query: 425 RVYEIEPEMEH--FGC-VVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNV 481
+ + + C ++D + G +E A++ + M VK ++ +W L++ G++
Sbjct: 203 GQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVK-DIHIWTTLISGYAKLGDM 261
Query: 482 ELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGI--ETVPGSSMM 539
E E+ + +M +N + L Y + G + + + M G+ E SS +
Sbjct: 262 EAAEK---LFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCL 318
Query: 540 DMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSM 583
+ + G H M + ++ I+ YS + S+
Sbjct: 319 CASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSL 362
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 295 bits (754), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 173/544 (31%), Positives = 277/544 (50%), Gaps = 53/544 (9%)
Query: 41 FHSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCN 100
L + K+ H ++K F + ++G LL YA A KVF+ I NV
Sbjct: 155 LQDLDNGKKIHCQLVKVPSFDNVVLTG-LLDMYAKCG--EIKSAHKVFNDITLRNVVCWT 211
Query: 101 IYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQ 160
+ G ++N + + +++M N N++TY TL AC ++ +G FH +VK
Sbjct: 212 SMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKS 271
Query: 161 GLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANE 220
G+ + ++ + MY G AR++ +E + D++ W AMI GY G V A
Sbjct: 272 GIELSSCLVTSLLDMYVKCGDISNARRVFNE--HSHVDLVMWTAMIVGYTHNGSVNEALS 329
Query: 221 VFVNMP---------------------------------DKNVGSW-----NAMISGLAR 242
+F M VG W NA++ A+
Sbjct: 330 LFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAK 389
Query: 243 CGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSM 302
C +A+ +F+ E+D ++W++II G+ + EAL +FH+M E + P+ + S+
Sbjct: 390 CYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASL 449
Query: 303 LTVCANVGSLDQGRWIHS------FVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEK 356
+ CA++GSL G +H+ F+ +S+ V GTAL+D Y KCG A +F+
Sbjct: 450 FSACASLGSLAVGSSLHAYSVKLGFLASSSVHV----GTALLDFYAKCGDPQSARLIFDT 505
Query: 357 MKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERG 416
++ + TW+AMIGG G +++LF +M +++KPN TF +L+AC H GMV G
Sbjct: 506 IEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEG 565
Query: 417 LGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACR 476
F+SM + Y P +H+ C+VD+L RAG +E+A IE MP++P+V +GA L+ C
Sbjct: 566 KKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCG 625
Query: 477 IHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGS 536
+H +LGE V +LD+ P ++ Y L+SN+YA GRW+ VR LMK+RG+ + G
Sbjct: 626 MHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGH 685
Query: 537 SMMD 540
S M+
Sbjct: 686 STME 689
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 128/482 (26%), Positives = 216/482 (44%), Gaps = 56/482 (11%)
Query: 35 ILNKKCFHSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTL-ATKVFDCIPR 93
+L KC ++ L+Q+H ++ D ++ L+ Y F +T A VFD IP
Sbjct: 49 LLLSKC-TNIDSLRQSHGVLTGNGLMGDISIATKLVSLYG---FFGYTKDARLVFDQIPE 104
Query: 94 PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQF 153
P+ ++ + L+ N E + + Y +M R + + KAC + G +
Sbjct: 105 PDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKI 164
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCG 213
H +VK +V + + + MYA G + A K+ ++ T +V+CW +MI GY+K
Sbjct: 165 HCQLVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFND--ITLRNVVCWTSMIAGYVKND 221
Query: 214 EVEAANEVFVNMPDKNV----------------------GSW-----------------N 234
E +F M + NV G W
Sbjct: 222 LCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVT 281
Query: 235 AMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKP 294
+++ +CG I NAR +F+E D + W+A+I GY EAL +F +M+ +IKP
Sbjct: 282 SLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKP 341
Query: 295 SRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQV---DAVLGTALIDMYVKCGRLDMAW 351
+ + S+L+ C + +L+ GR +H SI+V D + AL+ MY KC + A
Sbjct: 342 NCVTIASVLSGCGLIENLELGRSVHGL----SIKVGIWDTNVANALVHMYAKCYQNRDAK 397
Query: 352 EVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAG 411
VFE +++ WN++I G + +G +A+ LF +MN E PNGVT + +ACA G
Sbjct: 398 YVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLG 457
Query: 412 MVERGLGLFNSMKRVYEIEPEMEHFG-CVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGA 470
+ G L ++ + H G ++D + G + A +++ K N W A
Sbjct: 458 SLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEK-NTITWSA 516
Query: 471 LL 472
++
Sbjct: 517 MI 518
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 292 bits (748), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 182/525 (34%), Positives = 266/525 (50%), Gaps = 50/525 (9%)
Query: 61 HDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYH 120
D F T++ YA A +F+ +P N + + G +NGE A+ +
Sbjct: 134 RDSFSWNTMISGYAKNR--RIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFR 191
Query: 121 KMMVLNSRPNKFTYPTLFKACAVT---------GSVKEGVQ-----FHAFVVKQGLTGDV 166
KM V +S P L K ++ GS+ G + ++ +V G G V
Sbjct: 192 KMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQV 251
Query: 167 HIK------------------------------SAGIQMYASFGLFREARKMLDESGKTQ 196
++ I+ Y G AR + D+
Sbjct: 252 EAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQ--MKD 309
Query: 197 TDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEM 256
D I WN MIDGY+ +E A +F MP+++ SWN M+SG A G +E AR F++
Sbjct: 310 RDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKT 369
Query: 257 GERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGR 316
E+ +SW++II Y K + +KEA+++F +M E KP H L S+L+ + +L G
Sbjct: 370 PEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGM 429
Query: 317 WIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKV-REVSTWNAMIGGLAIH 375
+H V + I D + ALI MY +CG + + +F++MK+ REV TWNAMIGG A H
Sbjct: 430 QMHQIVVKTVIP-DVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFH 488
Query: 376 GRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEH 435
G A +A+ LF M P+ +TFV VLNACAHAG+V+ F SM VY+IEP+MEH
Sbjct: 489 GNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEH 548
Query: 436 FGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDME 495
+ +V++ G EEA I SMP +P+ VWGALL+ACRI+ NV L + +E
Sbjct: 549 YSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLE 608
Query: 496 PRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMD 540
P +S Y LL N+YA G WD+ ++VR M+ + I+ GSS +D
Sbjct: 609 PESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 170/397 (42%), Gaps = 69/397 (17%)
Query: 184 EARKMLDESGKTQTDVICWNAMIDGYLKCGEV---EAANEVFVNMPDKNVGSWNAMISGL 240
+ARK+ D K DV+ WN MI GY+ CG + E A ++F MP ++ SWN MISG
Sbjct: 89 QARKLFDVMPKR--DVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGY 146
Query: 241 ARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLP 300
A+ I A LF++M ER+ +SWSA+I G+ + A+ +F +M + P L+
Sbjct: 147 AKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVA 206
Query: 301 SMLT---------VCANVGSLDQGR---------WIHSFVERNSIQV------------- 329
++ V GSL GR I + +R ++
Sbjct: 207 GLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCG 266
Query: 330 -------------DAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHG 376
+ V ++I Y+K G + A +F++MK R+ +WN MI G
Sbjct: 267 DDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVS 326
Query: 377 RAEDAMKLFTKM-NGEKRKPN----GVTFVGVLNACAH--AGMVERGLGLFNSMKRVYEI 429
R EDA LF++M N + N G VG + H E+ +NS+ YE
Sbjct: 327 RMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEK 386
Query: 430 EPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGW 489
+ + VDL R + E KP+ +LL+A N+ LG ++
Sbjct: 387 NKDYKE---AVDLFIRMNIEGE----------KPDPHTLTSLLSASTGLVNLRLGMQMHQ 433
Query: 490 ILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMK 526
I++ + + L +Y++ G + R+ MK
Sbjct: 434 IVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMK 470
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 149/327 (45%), Gaps = 40/327 (12%)
Query: 180 GLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISG 239
G EAR + ++ T + WN MI GY+K E+ A ++F MP ++V +WN MISG
Sbjct: 54 GYIAEARDIFEKLEARNT--VTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISG 111
Query: 240 LARCG---MIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSR 296
CG +E AR LFDEM RD SW+ +I GY K R EAL +F +M P R
Sbjct: 112 YVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKM------PER 165
Query: 297 HLL--PSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRL-DMAWEV 353
+ + +M+T G +D + R D+ AL+ +K RL + AW +
Sbjct: 166 NAVSWSAMITGFCQNGEVDSA----VVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVL 221
Query: 354 FEKMKV---RE--VSTWNAMIGGLAIHGRAEDAMKLFTKM--------NGEKRK---PNG 397
+ + RE V +N +I G G+ E A LF ++ GE R+ N
Sbjct: 222 GQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNV 281
Query: 398 VTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIE 457
V++ ++ A G V LF+ MK + + + ++D +E+A
Sbjct: 282 VSWNSMIKAYLKVGDVVSARLLFDQMK-----DRDTISWNTMIDGYVHVSRMEDAFALFS 336
Query: 458 SMPVKPNVAVWGALLNACRIHGNVELG 484
MP + + W +++ GNVEL
Sbjct: 337 EMPNR-DAHSWNMMVSGYASVGNVELA 362
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 147/359 (40%), Gaps = 79/359 (22%)
Query: 203 NAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEI 262
N ++ ++ G + A ++F + +N +WN MISG + + AR LFD M +RD +
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVV 103
Query: 263 SWSAIIDGYIK---QRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIH 319
+W+ +I GY+ R +EA ++F +M PSR D W
Sbjct: 104 TWNTMISGYVSCGGIRFLEEARKLFDEM------PSR----------------DSFSW-- 139
Query: 320 SFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAE 379
+I Y K R+ A +FEKM R +W+AMI G +G +
Sbjct: 140 ---------------NTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVD 184
Query: 380 DAMKLFTKMNGEKRKPNGVTFVGVLN--ACAHAGMVERGLGLFNSMKRVYEIEPEMEHFG 437
A+ LF KM + P G++ + A V LG + S+ V E + +
Sbjct: 185 SAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWV---LGQYGSL--VSGREDLVYAYN 239
Query: 438 CVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPR 497
++ G+ G VE A + +P + C E ER +
Sbjct: 240 TLIVGYGQRGQVEAARCLFDQIP------------DLCGDDHGGEFRERFC--------K 279
Query: 498 NSGRYALLSNIYAKAGRWDDVARVRKL---MKERGIETVPGSSMMDMGGKVHEFKMGDS 553
N + + Y K G DV R L MK+R +T+ ++M+D G VH +M D+
Sbjct: 280 NVVSWNSMIKAYLKVG---DVVSARLLFDQMKDR--DTISWNTMID--GYVHVSRMEDA 331
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 292 bits (747), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 184/555 (33%), Positives = 286/555 (51%), Gaps = 78/555 (14%)
Query: 33 LDILNKKCFHSLQHLKQAHAI-ILKTAHFHDHFVSGTLLKCYANPNFN-NFTLATKVFDC 90
L + +++C ++++ +K H++ I+ H + + +S L PN N +F A+ +FD
Sbjct: 14 LILASQRC-NTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDS 72
Query: 91 IPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSR----PNKFTYPTLFKACAVTGS 146
I PN FV + ++ + +PH + Y +MV P+ T+ L AC
Sbjct: 73 IEIPNSFVYDTMIRICSRSSQPHLGLR-YFLLMVKEEEEDITPSYLTFHFLIVACLKACF 131
Query: 147 VKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMI 206
G Q H +VVK G+F +
Sbjct: 132 FSVGKQIHCWVVKN-------------------GVF----------------------LS 150
Query: 207 DGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSA 266
DG+++ G + + + DK ++ +AR +FDE+ + D + W
Sbjct: 151 DGHVQTGVLR------IYVEDK----------------LLFDARKVFDEIPQPDVVKWDV 188
Query: 267 IIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNS 326
+++GY++ E LEVF +M I+P + + LT CA VG+L QG+WIH FV++
Sbjct: 189 LMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKR 248
Query: 327 -IQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLF 385
I+ D +GTAL+DMY KCG ++ A EVFEK+ R V +W A+IGG A +G A+ A
Sbjct: 249 WIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCL 308
Query: 386 TKMNGEKR-KPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLG 444
++ E KP+ V +GVL ACAH G +E G + +M+ Y I P+ EH+ C+VDL+
Sbjct: 309 DRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMC 368
Query: 445 RAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRN----SG 500
RAG +++A IE MP+KP +VWGALLN CR H NVELGE LLD+E N
Sbjct: 369 RAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEA 428
Query: 501 RYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKE 560
LSNIY R + +VR ++++RGI PG S++++ G V +F GD SHP + +
Sbjct: 429 ALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQ 488
Query: 561 IYLMLEKM-MDKLQI 574
I+ ++ + +D QI
Sbjct: 489 IHTLIHLLSVDASQI 503
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 291 bits (746), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 163/515 (31%), Positives = 290/515 (56%), Gaps = 19/515 (3%)
Query: 81 FTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKA 140
++A +F +P NV N + G ++G KA+ + +M N ++ ++ KA
Sbjct: 125 LSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEM----PERNIVSWNSMVKA 180
Query: 141 CAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVI 200
G + E + + ++ DV +A + A G EAR++ D + ++I
Sbjct: 181 LVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFD--CMPERNII 234
Query: 201 CWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERD 260
WNAMI GY + ++ A+++F MP+++ SWN MI+G R + A LFD M E++
Sbjct: 235 SWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKN 294
Query: 261 EISWSAIIDGYIKQRCFKEALEVFHQMQRE-KIKPSRHLLPSMLTVCANVGSLDQGRWIH 319
ISW+ +I GY++ + +EAL VF +M R+ +KP+ S+L+ C+++ L +G+ IH
Sbjct: 295 VISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIH 354
Query: 320 SFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKV--REVSTWNAMIGGLAIHGR 377
+ ++ Q + ++ +AL++MY K G L A ++F+ V R++ +WN+MI A HG
Sbjct: 355 QLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGH 414
Query: 378 AEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFG 437
++A++++ +M KP+ VT++ +L AC+HAG+VE+G+ F + R + EH+
Sbjct: 415 GKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYT 474
Query: 438 CVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPR 497
C+VDL GRAG +++ FI + + + +GA+L+AC +H V + + V +L+
Sbjct: 475 CLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSD 534
Query: 498 NSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQ 557
++G Y L+SNIYA G+ ++ A +R MKE+G++ PG S + +G + H F +GD SHPQ
Sbjct: 535 DAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQ 594
Query: 558 MKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEE 592
+ + +L + +K++ V+ D EE E
Sbjct: 595 FEALDSILSDLRNKMR------KNKNVTSDAEEAE 623
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 170/355 (47%), Gaps = 28/355 (7%)
Query: 126 NSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREA 185
+SRP L G + E + + ++ + H+ I Y G REA
Sbjct: 41 SSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHV----ITGYIKLGDMREA 96
Query: 186 RKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGM 245
R++ D ++ +V+ W AM+ GYL+ ++ A +F MP++NV SWN MI G A+ G
Sbjct: 97 RELFDRV-DSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGR 155
Query: 246 IENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTV 305
I+ A LFDEM ER+ +SW++++ +++ EA+ +F +M R + +M+
Sbjct: 156 IDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVS----WTAMVDG 211
Query: 306 CANVGSLDQGRWIHSFV-ERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVST 364
A G +D+ R + + ERN I + A+I Y + R+D A ++F+ M R+ ++
Sbjct: 212 LAKNGKVDEARRLFDCMPERNIISWN-----AMITGYAQNNRIDEADQLFQVMPERDFAS 266
Query: 365 WNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMK 424
WN MI G + A LF +M + N +++ ++ E L +F+ M
Sbjct: 267 WNTMITGFIRNREMNKACGLFDRMP----EKNVISWTTMITGYVENKENEEALNVFSKML 322
Query: 425 RVYEIEPEMEHFGCVVDLLGR----AGLVE--EAEKFIESMPVKPNVAVWGALLN 473
R ++P + G V +L AGLVE + + I + N V ALLN
Sbjct: 323 RDGSVKP---NVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLN 374
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 165/377 (43%), Gaps = 64/377 (16%)
Query: 178 SFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMI 237
S LF R + S + + W +I K G++ A ++F +P+++V +W +I
Sbjct: 27 SVQLFNLVRSIYSSSSRPRVPQPEW--LIGELCKVGKIAEARKLFDGLPERDVVTWTHVI 84
Query: 238 SGLARCGMIENARTLFD--------------------------------EMGERDEISWS 265
+G + G + AR LFD EM ER+ +SW+
Sbjct: 85 TGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWN 144
Query: 266 AIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLP--SMLTVCANVGSLDQGRWIHSFVE 323
+IDGY + +ALE+F +M P R+++ SM+ G +D+ + +
Sbjct: 145 TMIDGYAQSGRIDKALELFDEM------PERNIVSWNSMVKALVQRGRIDEAMNLFERMP 198
Query: 324 RNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMK 383
R D V TA++D K G++D A +F+ M R + +WNAMI G A + R ++A +
Sbjct: 199 RR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQ 254
Query: 384 LFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLL 443
LF M + + ++ ++ + + GLF+ M PE +
Sbjct: 255 LFQVMP----ERDFASWNTMITGFIRNREMNKACGLFDRM-------PEKNVISWTTMIT 303
Query: 444 GRAGLVEEAE------KFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILL-DMEP 496
G E E K + VKPNV + ++L+AC + G+++ ++ +
Sbjct: 304 GYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQ 363
Query: 497 RNSGRYALLSNIYAKAG 513
+N + L N+Y+K+G
Sbjct: 364 KNEIVTSALLNMYSKSG 380
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 185/676 (27%), Positives = 331/676 (48%), Gaps = 57/676 (8%)
Query: 31 TVLDILNKKCFHSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDC 90
T + +L F L+ K H+ I+ + + +L+ Y+ F+ A +V +
Sbjct: 227 TFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQ--FSKMEDAVRVLNS 284
Query: 91 IPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEG 150
+VF+ + G + N +A+ + +M L +PN FTY + C+ S+ G
Sbjct: 285 SGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFG 344
Query: 151 VQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFR-EARKMLDESGKTQTDVICWNAMIDGY 209
Q H+ +K G + +A + MY EA ++ +V+ W +I G
Sbjct: 345 KQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVF--GAMVSPNVVSWTTLILGL 402
Query: 210 LKCGEVEAANEVFVNMPDKNVGSWNAMISGLAR-CGMIENARTLFD-------------- 254
+ G V+ + + M + V +SG+ R C + + R + +
Sbjct: 403 VDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEM 462
Query: 255 ------------------------EMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQRE 290
M RD I++++++ + + + AL V + M +
Sbjct: 463 VVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGD 522
Query: 291 KIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMA 350
I+ + LP ++ AN+G+L+ G+ +H + ++ A + +L+DMY KCG L+ A
Sbjct: 523 GIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDA 582
Query: 351 WEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHA 410
+VFE++ +V +WN ++ GLA +G A+ F +M ++ +P+ VTF+ +L+AC++
Sbjct: 583 KKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNG 642
Query: 411 GMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGA 470
+ + GL F MK++Y IEP++EH+ +V +LGRAG +EEA +E+M +KPN ++
Sbjct: 643 RLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKT 702
Query: 471 LLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGI 530
LL ACR GN+ LGE + L + P + Y LL+++Y ++G+ + + R LM E+ +
Sbjct: 703 LLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRL 762
Query: 531 ETVPGSSMMDMGGKVHEFKMGDSSH-PQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIE 589
G S +++ GKVH F D + + IY +E + ++++ G SP Y
Sbjct: 763 SKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIYAEIESIKEEIKRFG-SP------YRGN 815
Query: 590 EEEKETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMR 649
E HS K A+ +G ++A P +H+VKN +C DCH +++++ I +R
Sbjct: 816 ENA-----SFHSAKQAVVYGFIYASPEAPVHVVKNKILCKDCHEFVSILTRLVDKKITVR 870
Query: 650 DRVRYHHFKNGMCSCK 665
D + H FKNG CSCK
Sbjct: 871 DGNQVHIFKNGECSCK 886
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 194/423 (45%), Gaps = 44/423 (10%)
Query: 84 ATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAV 143
A K+FD + VF + + ++ E A+S + +MM + PN+FT+ ++ ++CA
Sbjct: 77 ARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAG 136
Query: 144 TGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWN 203
+ G + H V+K G G+ + S+ +Y+ G F+EA ++ S D I W
Sbjct: 137 LRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELF--SSLQNADTISWT 194
Query: 204 AMIDGY---------------------------------------LKCGEVEAANEVFVN 224
MI L+ G+ +N +
Sbjct: 195 MMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRG 254
Query: 225 MPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVF 284
+P NV +++ ++ +E+A + + GE+D W++++ G+++ KEA+ F
Sbjct: 255 IP-LNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTF 313
Query: 285 HQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKC 344
+M+ ++P+ ++L++C+ V SLD G+ IHS + + +G AL+DMY+KC
Sbjct: 314 LEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKC 373
Query: 345 GRLDM-AWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGV 403
++ A VF M V +W +I GL HG +D L +M + +PN VT GV
Sbjct: 374 SASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGV 433
Query: 404 LNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKP 463
L AC+ V R L + + R + ++ EM +VD + V+ A I SM +
Sbjct: 434 LRACSKLRHVRRVLEIHAYLLRRH-VDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRD 492
Query: 464 NVA 466
N+
Sbjct: 493 NIT 495
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 102/444 (22%), Positives = 192/444 (43%), Gaps = 56/444 (12%)
Query: 144 TGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWN 203
+ S + G+ H V+K GL ++ + + + +Y ARK+ DE + V W
Sbjct: 36 SNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDE--MSHRTVFAWT 93
Query: 204 AMIDGYLKCGEVEAANEVFVNM----PDKNVGSWNAMI---SGL---------------- 240
MI + K E +A +F M N ++++++ +GL
Sbjct: 94 VMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKT 153
Query: 241 ----------------ARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVF 284
++CG + A LF + D ISW+ +I + R ++EAL+ +
Sbjct: 154 GFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFY 213
Query: 285 HQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKC 344
+M + + P+ +L + +G L+ G+ IHS + I ++ VL T+L+D Y +
Sbjct: 214 SEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQF 272
Query: 345 GRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVL 404
+++ A V ++V W +++ G + RA++A+ F +M +PN T+ +L
Sbjct: 273 SKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAIL 332
Query: 405 NACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVE-EAEKFIESMPVKP 463
+ C+ ++ G + + +V E + +VD+ + E EA + +M V P
Sbjct: 333 SLCSAVRSLDFGKQIHSQTIKV-GFEDSTDVGNALVDMYMKCSASEVEASRVFGAM-VSP 390
Query: 464 NVAVWGALLNACRIHGNVE--LGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARV 521
NV W L+ HG V+ G + + ++EP LS + + V RV
Sbjct: 391 NVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEP----NVVTLSGVLRACSKLRHVRRV 446
Query: 522 RK-----LMKERGIETVPGSSMMD 540
+ L + E V G+S++D
Sbjct: 447 LEIHAYLLRRHVDGEMVVGNSLVD 470
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 166/533 (31%), Positives = 281/533 (52%), Gaps = 15/533 (2%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSI 107
KQ+HAI + D+ + +LL Y + A VFD + +V N+ + G +
Sbjct: 294 KQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEY--AEMVFDRMFEKDVVTWNLIISGYV 351
Query: 108 ENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVH 167
+ G AI M + + + T TL A A T ++K G + + ++ D+
Sbjct: 352 QQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIV 411
Query: 168 IKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMP- 226
+ S + MYA G +A+K+ D + + D+I WN ++ Y + G A +F M
Sbjct: 412 LASTVMDMYAKCGSIVDAKKVFDST--VEKDLILWNTLLAAYAESGLSGEALRLFYGMQL 469
Query: 227 ---DKNVGSWNAMISGLARCGMIENARTLFDEMGER----DEISWSAIIDGYIKQRCFKE 279
NV +WN +I L R G ++ A+ +F +M + ISW+ +++G ++ C +E
Sbjct: 470 EGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEE 529
Query: 280 ALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAV-LGTALI 338
A+ +MQ ++P+ + L+ CA++ SL GR IH ++ RN V + T+L+
Sbjct: 530 AILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLV 589
Query: 339 DMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGV 398
DMY KCG ++ A +VF E+ NAMI A++G ++A+ L+ + G KP+ +
Sbjct: 590 DMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNI 649
Query: 399 TFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIES 458
T VL+AC HAG + + + +F + ++P +EH+G +VDLL AG E+A + IE
Sbjct: 650 TITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEE 709
Query: 459 MPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDV 518
MP KP+ + +L+ +C EL + + LL+ EP NSG Y +SN YA G WD+V
Sbjct: 710 MPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEV 769
Query: 519 ARVRKLMKERGIETVPGSSMMDMGGK--VHEFKMGDSSHPQMKEIYLMLEKMM 569
++R++MK +G++ PG S + + G+ VH F D +H ++ EI +ML ++
Sbjct: 770 VKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMMLALLL 822
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 139/543 (25%), Positives = 251/543 (46%), Gaps = 64/543 (11%)
Query: 48 KQAHAIILKTAHFH--DHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKG 105
KQ HA ILK F+ + ++ L+ YA + +A +F + NVF +
Sbjct: 90 KQIHARILKNGDFYARNEYIETKLVIFYAK--CDALEIAEVLFSKLRVRNVFSWAAIIGV 147
Query: 106 SIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGD 165
G A+ + +M+ P+ F P + KAC + G H +VVK GL
Sbjct: 148 KCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDC 207
Query: 166 VHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM 225
V + S+ MY G+ +A K+ DE + + WNA++ GY++ G+ E A +F +M
Sbjct: 208 VFVASSLADMYGKCGVLDDASKVFDEI--PDRNAVAWNALMVGYVQNGKNEEAIRLFSDM 265
Query: 226 PDKNV------------GSWN-------------AMISGL--------------ARCGMI 246
+ V S N A+++G+ + G+I
Sbjct: 266 RKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLI 325
Query: 247 ENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVC 306
E A +FD M E+D ++W+ II GY++Q ++A+ + M+ EK+K L ++++
Sbjct: 326 EYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAA 385
Query: 307 ANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWN 366
A +L G+ + + R+S + D VL + ++DMY KCG + A +VF+ +++ WN
Sbjct: 386 ARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWN 445
Query: 367 AMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRV 426
++ A G + +A++LF M E PN +T+ ++ + G V+ +F M+
Sbjct: 446 TLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQS- 504
Query: 427 YEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMP---VKPNVAVWGALLNACRIHGNVEL 483
I P + + +++ + + G EEA F+ M ++PN L+AC ++ +
Sbjct: 505 SGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHI 564
Query: 484 GERV-GWILLDMEPRNSGRYALLS------NIYAKAGRWDDVARVRKLMKERGIETVPGS 536
G + G+I+ RN +L+S ++YAK G D+ + K+ + +P S
Sbjct: 565 GRTIHGYII-----RNLQHSSLVSIETSLVDMYAKCG---DINKAEKVFGSKLYSELPLS 616
Query: 537 SMM 539
+ M
Sbjct: 617 NAM 619
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 196/408 (48%), Gaps = 45/408 (11%)
Query: 108 ENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQG--LTGD 165
+NGE +A+S +M N R Y + + C + G Q HA ++K G +
Sbjct: 47 KNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARN 106
Query: 166 VHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM 225
+I++ + YA A + S +V W A+I + G E A FV M
Sbjct: 107 EYIETKLVIFYAKCDALEIAEVLF--SKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEM 164
Query: 226 PDKNVGSWNAMI-------------------------SGL--------------ARCGMI 246
+ + N ++ SGL +CG++
Sbjct: 165 LENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVL 224
Query: 247 ENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVC 306
++A +FDE+ +R+ ++W+A++ GY++ +EA+ +F M+++ ++P+R + + L+
Sbjct: 225 DDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSAS 284
Query: 307 ANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWN 366
AN+G +++G+ H+ N +++D +LGT+L++ Y K G ++ A VF++M ++V TWN
Sbjct: 285 ANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWN 344
Query: 367 AMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRV 426
+I G G EDA+ + M EK K + VT +++A A ++ G + R
Sbjct: 345 LIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIR- 403
Query: 427 YEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNA 474
+ E ++ V+D+ + G + +A+K +S V+ ++ +W LL A
Sbjct: 404 HSFESDIVLASTVMDMYAKCGSIVDAKKVFDS-TVEKDLILWNTLLAA 450
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 162/502 (32%), Positives = 257/502 (51%), Gaps = 46/502 (9%)
Query: 39 KCFHSLQHLKQAHAIILKTAHFHDHF----------VSGTLLKCYANPNFNNFTLATKVF 88
K +L+HL Q HA + + + F + T + A+ + + AT VF
Sbjct: 12 KLCRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATSVF 71
Query: 89 DCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKF-TYPTLFKACAVTGSV 147
I P+ F N ++ + + + M S P F T+P +FKACA +
Sbjct: 72 RFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKN- 130
Query: 148 KEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMID 207
GD+ + FGL +D+ N +I
Sbjct: 131 ----------------GDLTLVKTLHCQALRFGLL--------------SDLFTLNTLIR 160
Query: 208 GYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAI 267
Y +++A ++F P ++V ++N +I GL + I AR LFD M RD +SW+++
Sbjct: 161 VYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSL 220
Query: 268 IDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSI 327
I GY + +EA+++F +M +KP + S L+ CA G +G+ IH + +R +
Sbjct: 221 ISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRL 280
Query: 328 QVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTK 387
+D+ L T L+D Y KCG +D A E+FE + + TWNAMI GLA+HG E + F K
Sbjct: 281 FIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRK 340
Query: 388 MNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAG 447
M KP+GVTF+ VL C+H+G+V+ LF+ M+ +Y++ EM+H+GC+ DLLGRAG
Sbjct: 341 MVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAG 400
Query: 448 LVEEAEKFIESMPV----KPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYA 503
L+EEA + IE MP + + W LL CRIHGN+E+ E+ + + P + G Y
Sbjct: 401 LIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYK 460
Query: 504 LLSNIYAKAGRWDDVARVRKLM 525
++ +YA A RW++V +VR+++
Sbjct: 461 VMVEMYANAERWEEVVKVREII 482
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 171/500 (34%), Positives = 258/500 (51%), Gaps = 46/500 (9%)
Query: 84 ATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAV 143
A K+FD I + +V + G A+ + +M + + N+FTY ++ K+C
Sbjct: 66 ARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKD 125
Query: 144 TGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWN 203
G +KEG+Q H V K G++ ++SA + +YA G EAR D + D++ WN
Sbjct: 126 LGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDS--MKERDLVSWN 183
Query: 204 AMIDGYLKCGEVEAANEVFVNM------PD-----------------------------K 228
AMIDGY + + +F M PD
Sbjct: 184 AMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKL 243
Query: 229 NVGSWNAMISGLA----RCGMIENARTLFDEMGERDEISWSAIIDGYIKQR-CFKEALEV 283
G +A+I L +CG + NA L + +RD +S +A+I G+ +Q C +A ++
Sbjct: 244 GFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDI 303
Query: 284 FHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNS-IQVDAVLGTALIDMYV 342
F M R K K ++ SML +C + S+ GR IH F ++S I+ D LG +LIDMY
Sbjct: 304 FKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYA 363
Query: 343 KCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVG 402
K G ++ A FE+MK ++V +W ++I G HG E A+ L+ +M E+ KPN VTF+
Sbjct: 364 KSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLS 423
Query: 403 VLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMP-- 460
+L+AC+H G E G ++++M + IE EH C++D+L R+G +EEA I S
Sbjct: 424 LLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGI 483
Query: 461 VKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVAR 520
V + + WGA L+ACR HGNV+L + LL MEPR Y L+++YA G WD+
Sbjct: 484 VSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALN 543
Query: 521 VRKLMKERG-IETVPGSSMM 539
RKLMKE G PG S++
Sbjct: 544 TRKLMKESGSCNKAPGYSLV 563
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 155/330 (46%), Gaps = 46/330 (13%)
Query: 244 GMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSML 303
G +++AR LFD + +RD +SW+A+I + + +AL +F +M RE +K ++ S+L
Sbjct: 61 GDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVL 120
Query: 304 TVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVS 363
C ++G L +G IH VE+ + + ++ +AL+ +Y +CG+++ A F+ MK R++
Sbjct: 121 KSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLV 180
Query: 364 TWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACA-----------HAGM 412
+WNAMI G + A+ + LF M E +KP+ TF +L A H
Sbjct: 181 SWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLA 240
Query: 413 VERGLGLFNSMKR-----------------VYEIEPEMEHFGCVVDLLG---RAGLVEEA 452
++ G G +++ R ++E + + C + G + +A
Sbjct: 241 IKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDA 300
Query: 453 EKFIES---MPVKPNVAVWGALLNACRIHGNVELGERV-------GWILLDMEPRNSGRY 502
+ M K + V ++L C +V +G ++ I D+ NS
Sbjct: 301 FDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNS--- 357
Query: 503 ALLSNIYAKAGRWDDVARVRKLMKERGIET 532
L ++YAK+G +D + MKE+ + +
Sbjct: 358 --LIDMYAKSGEIEDAVLAFEEMKEKDVRS 385
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 151/367 (41%), Gaps = 73/367 (19%)
Query: 66 SGTLLKCYANPNFNNFTLAT--KVFDCIPRPNVFVCNIYLKG-SIENGEPHKAISCYHKM 122
S L++ N +LA K+ + + ++ C + G S +N A + M
Sbjct: 248 SSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDM 307
Query: 123 MVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLF 182
+ + ++ ++ ++ K C SV G Q H F +K
Sbjct: 308 IRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALK----------------------- 344
Query: 183 REARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLAR 242
S + + DV N++ID Y K GE+E A F M +K+V SW ++I+G R
Sbjct: 345 ---------SSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGR 395
Query: 243 CGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSM 302
G F++A++++++M+ E+IKP+ S+
Sbjct: 396 HGN-------------------------------FEKAIDLYNRMEHERIKPNDVTFLSL 424
Query: 303 LTVCANVGSLDQGRWIH-SFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVF---EKMK 358
L+ C++ G + G I+ + + ++ I+ + +IDM + G L+ A+ + E +
Sbjct: 425 LSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIV 484
Query: 359 VREVSTWNAMIGGLAIHGRAEDAMKLFTK-MNGEKRKPNGVTFVGVLNACAHAGMVERGL 417
STW A + HG + + T+ ++ E RKP V ++ + + A G + L
Sbjct: 485 SLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKP--VNYINLASVYAANGAWDNAL 542
Query: 418 GLFNSMK 424
MK
Sbjct: 543 NTRKLMK 549
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 9/189 (4%)
Query: 292 IKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAW 351
+ PS +L L +C+ Q IH N + L LID+Y+K G + A
Sbjct: 10 LSPSLYL--KALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHAR 67
Query: 352 EVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAG 411
++F+++ R+V +W AMI + G DA+ LF +M+ E K N T+ VL +C G
Sbjct: 68 KLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLG 127
Query: 412 MVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGAL 471
++ G+ + S+++ + ++ L R G +EEA +SM + V+ W A+
Sbjct: 128 CLKEGMQIHGSVEK-GNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVS-WNAM 185
Query: 472 L-----NAC 475
+ NAC
Sbjct: 186 IDGYTANAC 194
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 89/220 (40%), Gaps = 13/220 (5%)
Query: 48 KQAHAIILKTAHFH-DHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGS 106
+Q H LK++ D + +L+ YA A F+ + +V + G
Sbjct: 336 RQIHGFALKSSQIRFDVALGNSLIDMYAKSG--EIEDAVLAFEEMKEKDVRSWTSLIAGY 393
Query: 107 IENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQ-FHAFVVKQGLTGD 165
+G KAI Y++M +PN T+ +L AC+ TG + G + + + K G+
Sbjct: 394 GRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAR 453
Query: 166 VHIKSAGIQMYASFGLFREARKML-DESGKTQTDVICWNAMIDGYLKCGEVE----AANE 220
S I M A G EA ++ + G W A +D + G V+ AA +
Sbjct: 454 EEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQ 513
Query: 221 VFVNMPDKNVGSWNAMISGLARCGMIENA---RTLFDEMG 257
+ P K V N + S A G +NA R L E G
Sbjct: 514 LLSMEPRKPVNYIN-LASVYAANGAWDNALNTRKLMKESG 552
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 285 bits (730), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 178/551 (32%), Positives = 284/551 (51%), Gaps = 70/551 (12%)
Query: 33 LDILNKKCFHSLQHLKQAHAI-ILKTAHFHDHFVSGTLLKCYANPNFN-NFTLATKVFDC 90
L + +++C ++++ +K H++ I+ H + + +S L PN N +F A+ +FD
Sbjct: 14 LILASQRC-NTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDS 72
Query: 91 IPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEG 150
I PN F Y T+ + C+ + G
Sbjct: 73 I-----------------------------------EIPNSFVYDTMIRICSRSSQPHLG 97
Query: 151 VQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYL 210
+++ +VK+ D+ A + F + + GK + CW
Sbjct: 98 LRYFLLMVKEE-EEDI----APSYLTFHFLIVACLKACFFSVGK---QIHCW-------- 141
Query: 211 KCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDG 270
N VF++ G + ++ +AR +FDE+ + D + W +++G
Sbjct: 142 -----VVKNGVFLSDSHVQTGVLRIYVED----KLLLDARKVFDEIPQPDVVKWDVLMNG 192
Query: 271 YIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNS-IQV 329
Y++ E LEVF +M + ++P + + LT CA VG+L QG+WIH FV++ S I+
Sbjct: 193 YVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIES 252
Query: 330 DAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMN 389
D +GTAL+DMY KCG ++ A EVF+K+ R V +W A+IGG A +G A+ AM ++
Sbjct: 253 DVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLE 312
Query: 390 GEKR-KPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGL 448
E KP+ V +GVL ACAH G +E G + +M+ YEI P+ EH+ C+VDL+ RAG
Sbjct: 313 REDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGR 372
Query: 449 VEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRN----SGRYAL 504
+++A IE MP+KP +VWGALLN CR H NVELGE LLD+E N
Sbjct: 373 LDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQ 432
Query: 505 LSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLM 564
LSNIY R + ++VR ++++RG+ PG S++++ G V +F GD SHP + +I+ +
Sbjct: 433 LSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQIHTV 492
Query: 565 LEKM-MDKLQI 574
+ + +D LQI
Sbjct: 493 IHLLSVDALQI 503
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 156/367 (42%), Gaps = 70/367 (19%)
Query: 16 ELSSDQAPSSKLSQKTVLDILNKKCFHSLQHLKQAHAIILKTAHF-HDHFVSGTLLKCYA 74
E D APS ++ L K CF S+ KQ H ++K F D V +L+ Y
Sbjct: 107 EEEEDIAPSYLTFHFLIVACL-KACFFSVG--KQIHCWVVKNGVFLSDSHVQTGVLRIYV 163
Query: 75 NPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTY 134
A KVFD IP+P+V ++ + G + G + + + +M+V P++F+
Sbjct: 164 EDKL--LLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSV 221
Query: 135 PTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGK 194
T ACA G++ +G H FV K+
Sbjct: 222 TTALTACAQVGALAQGKWIHEFVKKKSWI------------------------------- 250
Query: 195 TQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFD 254
++DV A++D Y KCG +E A EVF + +NV SW A+I G A G + A T +
Sbjct: 251 -ESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLE 309
Query: 255 EMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQ 314
+ ER+ DG IKP +L +L CA+ G L++
Sbjct: 310 RL-ERE--------DG---------------------IKPDSVVLLGVLAACAHGGFLEE 339
Query: 315 GRWIHSFVE-RNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREV-STWNAMIGGL 372
GR + +E R I + ++D+ + GRLD A + EKM ++ + S W A++ G
Sbjct: 340 GRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGC 399
Query: 373 AIHGRAE 379
H E
Sbjct: 400 RTHKNVE 406
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 164/540 (30%), Positives = 294/540 (54%), Gaps = 20/540 (3%)
Query: 51 HAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENG 110
H +++ + V LL Y P A +F +P N N+ +KG +
Sbjct: 181 HTQVIQIGLKENLHVVNELLTLY--PKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEY 238
Query: 111 EPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKS 170
+ A+ + M +P++ T+ ++ + G ++ +++ + G +
Sbjct: 239 DCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNA----VSG 294
Query: 171 AGIQMYASFGLFREARKMLDE------SGKTQTDVICWNAMIDGYLKCGEVEAANEVFVN 224
+ ++ S EA + ++ G + + NA+I Y K G+V+ A +F
Sbjct: 295 EALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQ 354
Query: 225 MPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEI--------SWSAIIDGYIKQRC 276
+ +K + SWN++I+ G ++ A +LF E+ E + + +W+++I G Q
Sbjct: 355 IRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGR 414
Query: 277 FKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTA 336
++LE F QMQ K+ + + +L++CA + +L+ GR IH V R S+ + ++ A
Sbjct: 415 GDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNA 474
Query: 337 LIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPN 396
L++MY KCG L VFE ++ +++ +WN++I G +HG AE A+ +F +M P+
Sbjct: 475 LVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPD 534
Query: 397 GVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFI 456
G+ V VL+AC+HAG+VE+G +F SM + + +EP+ EH+ C+VDLLGR G ++EA + +
Sbjct: 535 GIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIV 594
Query: 457 ESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWD 516
++MP++P V V GALLN+CR+H NV++ E + L +EP +G Y LLSNIY+ GRW+
Sbjct: 595 KNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWE 654
Query: 517 DVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEG 576
+ A VR L K++ ++ V GSS +++ K ++F G + + IY +LE ++ + +G
Sbjct: 655 ESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLKKG 714
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/447 (21%), Positives = 182/447 (40%), Gaps = 66/447 (14%)
Query: 9 PSGLKPIELSSDQAPSSKLSQKTVLDIL---------NKKCFHSLQHL----------KQ 49
P L+ + Q P + +S + + ++ FH HL +Q
Sbjct: 15 PWRLRNFCFLTSQCPYTSISSPDTVSVSSYYSLTSNNDQSLFHYFDHLLGLCLTAQQCRQ 74
Query: 50 AHA-IILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPR---PNVFVCNIYLKG 105
HA ++L F ++ L+ YA A VF+ + ++ + N LK
Sbjct: 75 VHAQVLLSDFIFRSGSLAANLISVYARLGL--LLDARNVFETVSLVLLSDLRLWNSILKA 132
Query: 106 SIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGD 165
++ +G A+ Y M + + P + +AC G FH V++ GL +
Sbjct: 133 NVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKEN 192
Query: 166 VHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM 225
+H+ N ++ Y K G + A +FV M
Sbjct: 193 LHVV---------------------------------NELLTLYPKAGRMGDAYNLFVEM 219
Query: 226 PDKNVGSWNAMISGLARCGMIENARTLFDEMGER----DEISWSAIIDGYIKQRCFKEAL 281
P +N SWN MI G ++ E+A +F+ M DE++W++++ + + F++ L
Sbjct: 220 PVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVL 279
Query: 282 EVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMY 341
+ FH M+ S L +VCA + +L +H +V + + ALI +Y
Sbjct: 280 KYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVY 339
Query: 342 VKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKR----KPNG 397
K G++ A +F +++ + + +WN++I G+ ++A+ LF+++ K N
Sbjct: 340 GKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANV 399
Query: 398 VTFVGVLNACAHAGMVERGLGLFNSMK 424
VT+ V+ C G + L F M+
Sbjct: 400 VTWTSVIKGCNVQGRGDDSLEYFRQMQ 426
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 172/562 (30%), Positives = 280/562 (49%), Gaps = 45/562 (8%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSI 107
+Q H ++K +D +V +LL Y+ A VF C+ + + N +
Sbjct: 292 RQIHCDVVKMGLHNDPYVCTSLLSMYSKCGM--VGEAETVFSCVVDKRLEIWNAMVAAYA 349
Query: 108 ENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVH 167
EN + A+ + M + P+ FT + C+V G G HA + K+ +
Sbjct: 350 ENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTST 409
Query: 168 IKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPD 227
I+SA + +Y+ G +A + + D++ W ++I G K G+ + A +VF +M D
Sbjct: 410 IESALLTLYSKCGCDPDAYLVFKS--MEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKD 467
Query: 228 K-----------------------------------------NVGSWNAMISGLARCGMI 246
NV +++I ++CG+
Sbjct: 468 DDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLP 527
Query: 247 ENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVC 306
E A +F M + ++W+++I Y + + ++++F+ M + I P + S+L
Sbjct: 528 EMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAI 587
Query: 307 ANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWN 366
++ SL +G+ +H + R I D L ALIDMYVKCG A +F+KM+ + + TWN
Sbjct: 588 SSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWN 647
Query: 367 AMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRV 426
MI G HG A+ LF +M P+ VTF+ +++AC H+G VE G +F MK+
Sbjct: 648 LMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQD 707
Query: 427 YEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGER 486
Y IEP MEH+ +VDLLGRAGL+EEA FI++MP++ + ++W LL+A R H NVELG
Sbjct: 708 YGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGIL 767
Query: 487 VGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVH 546
LL MEP Y L N+Y +AG ++ A++ LMKE+G+ PG S +++ + +
Sbjct: 768 SAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTN 827
Query: 547 EFKMGDSSHPQMKEIYLMLEKM 568
F G SS P EI+ +L ++
Sbjct: 828 VFFSGGSSSPMKAEIFNVLNRL 849
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/491 (23%), Positives = 234/491 (47%), Gaps = 60/491 (12%)
Query: 43 SLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDC-------IPRPN 95
+L + K H ++ +D F++ +L+ Y F ++ A +VFD + +
Sbjct: 75 NLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDY--AVQVFDGWSQSQSGVSARD 132
Query: 96 VFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVK--EGVQF 153
V V N + G + + + C+ +M+V RP+ F+ + G+ + EG Q
Sbjct: 133 VTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQI 192
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCG 213
H F+++ L D +K+A I MY FGL +A ++ E + +++V+ WN MI G+ G
Sbjct: 193 HGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEI-EDKSNVVLWNVMIVGFGGSG 251
Query: 214 EVEAANEVFVNMPDKNV--------GSWNA------------------------------ 235
E++ ++++ + +V G+ A
Sbjct: 252 ICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCT 311
Query: 236 -MISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKP 294
++S ++CGM+ A T+F + ++ W+A++ Y + AL++F M+++ + P
Sbjct: 312 SLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLP 371
Query: 295 SRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVF 354
L ++++ C+ +G + G+ +H+ + + IQ + + +AL+ +Y KCG A+ VF
Sbjct: 372 DSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVF 431
Query: 355 EKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKM--NGEKRKPNGVTFVGVLNACAHAGM 412
+ M+ +++ W ++I GL +G+ ++A+K+F M + + KP+ V NACA
Sbjct: 432 KSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEA 491
Query: 413 VERGLGLFNSMKRVYEIEPEMEHF--GCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGA 470
+ GL + SM + + + F ++DL + GL E A K SM + N+ W +
Sbjct: 492 LRFGLQVHGSMIKTGLV---LNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE-NMVAWNS 547
Query: 471 LLNACRIHGNV 481
++ +C N+
Sbjct: 548 MI-SCYSRNNL 557
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 117/496 (23%), Positives = 218/496 (43%), Gaps = 48/496 (9%)
Query: 27 LSQKTVLDILNKKCFHSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATK 86
S V+ ++ K+ + KQ H +L+ + D F+ L+ Y F A +
Sbjct: 169 FSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFK--FGLSIDAWR 226
Query: 87 VFDCI-PRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTG 145
VF I + NV + N+ + G +G ++ Y + + ++ AC+ +
Sbjct: 227 VFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSE 286
Query: 146 SVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAM 205
+ G Q H VVK GL D ++ ++ + MY+ G+ EA + + ++ WNAM
Sbjct: 287 NSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEI--WNAM 344
Query: 206 IDGYLKCGEVEAANEVFVNMPDKNV-----------------GSWN-------------- 234
+ Y + +A ++F M K+V G +N
Sbjct: 345 VAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPI 404
Query: 235 --------AMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQ 286
A+++ ++CG +A +F M E+D ++W ++I G K FKEAL+VF
Sbjct: 405 QSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGD 464
Query: 287 MQRE--KIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKC 344
M+ + +KP ++ S+ CA + +L G +H + + + ++ +G++LID+Y KC
Sbjct: 465 MKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKC 524
Query: 345 GRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVL 404
G +MA +VF M + WN+MI + + E ++ LF M + P+ V+ VL
Sbjct: 525 GLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVL 584
Query: 405 NACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPN 464
A + + +G L R+ I + ++D+ + G + AE + M K +
Sbjct: 585 VAISSTASLLKGKSLHGYTLRL-GIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHK-S 642
Query: 465 VAVWGALLNACRIHGN 480
+ W ++ HG+
Sbjct: 643 LITWNLMIYGYGSHGD 658
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 121/470 (25%), Positives = 191/470 (40%), Gaps = 101/470 (21%)
Query: 100 NIYLKGSIENGEPHKAISCYHKMMVLNSRP---NKFTYPTLFKACAVTGSVKEGVQFHAF 156
N ++ I+ GE +A+ Y K S P + FT+P+L KAC+ ++ G H
Sbjct: 28 NSGIRALIQKGEYLQALHLYSKHD--GSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 157 VVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVE 216
VV G D I ++ + MY +KCG ++
Sbjct: 86 VVVLGWRYDPFIATSLVNMY---------------------------------VKCGFLD 112
Query: 217 AANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRC 276
A +VF W+ SG++ RD W+++IDGY K R
Sbjct: 113 YAVQVF--------DGWSQSQSGVS----------------ARDVTVWNSMIDGYFKFRR 148
Query: 277 FKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSL--DQGRWIHSFVERNSIQVDAVLG 334
FKE + F +M ++P L +++V G+ ++G+ IH F+ RNS+ D+ L
Sbjct: 149 FKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLK 208
Query: 335 TALIDMYVKCGRLDMAWEVFEKMKVRE-VSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKR 393
TALIDMY K G AW VF +++ + V WN MI G G E ++ L+
Sbjct: 209 TALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSV 268
Query: 394 KPNGVTFVGVLNACA-----------HAGMVERGL--------GLFNSMKRVYEIEPEME 434
K +F G L AC+ H +V+ GL L + + +
Sbjct: 269 KLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAET 328
Query: 435 HFGCVVDL---LGRAGLVEEAEK-----------FIESMPVKPNVAVWGALLNACRIHGN 480
F CVVD + A + AE F+ V P+ +++ C + G
Sbjct: 329 VFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGL 388
Query: 481 VELGERVGWILLD--MEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKER 528
G+ V L ++ ++ ALL+ +Y+K G D V K M+E+
Sbjct: 389 YNYGKSVHAELFKRPIQSTSTIESALLT-LYSKCGCDPDAYLVFKSMEEK 437
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 283 bits (723), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 168/505 (33%), Positives = 275/505 (54%), Gaps = 18/505 (3%)
Query: 73 YANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMM--VLNSRPN 130
Y + + A ++F +P N+ + G N +A+ + +M V PN
Sbjct: 239 YGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPN 298
Query: 131 KFTYPTLFKACAVTGS--VKEGVQFHAFVVKQG---LTGDVHIKSAGIQMYASFGLFREA 185
T +L AC G + G Q HA V+ G + D + + + MYAS GL A
Sbjct: 299 GETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASA 358
Query: 186 RKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPD-KNVGSWNAMISGLARCG 244
+ +L+ES Q+ C N +I+ YLK G++E A +F + + SW +MI G G
Sbjct: 359 QSLLNESFDLQS---C-NIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAG 414
Query: 245 MIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLT 304
+ A LF ++ ++D ++W+ +I G ++ F EA + M R +KP +L+
Sbjct: 415 DVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLS 474
Query: 305 VCANVGSLDQGRWIHSFVERNS--IQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREV 362
+LDQG+ IH + + + D +L +L+ MY KCG ++ A+E+F KM ++
Sbjct: 475 SAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDT 534
Query: 363 STWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNS 422
+WN+MI GL+ HG A+ A+ LF +M +KPN VTF+GVL+AC+H+G++ RGL LF +
Sbjct: 535 VSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKA 594
Query: 423 MKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVE 482
MK Y I+P ++H+ ++DLLGRAG ++EAE+FI ++P P+ V+GALL C ++ +
Sbjct: 595 MKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDK 654
Query: 483 ----LGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSM 538
+ ER LL+++P N+ + L N+YA GR D +RK M +G++ PG S
Sbjct: 655 DAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSW 714
Query: 539 MDMGGKVHEFKMGDSSHPQMKEIYL 563
+ + G+ + F GD S + ++ L
Sbjct: 715 VVVNGRANVFLSGDKSASEAAQMVL 739
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 126/532 (23%), Positives = 242/532 (45%), Gaps = 62/532 (11%)
Query: 68 TLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNS 127
+LL YA + A +F+ +P N+ CN L G ++ ++A + + +M
Sbjct: 82 SLLSKYAKTGY--LDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREM----- 134
Query: 128 RPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARK 187
N ++ + A G ++ V+ + ++ + + + I+ G +A++
Sbjct: 135 PKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRN----GDMEKAKQ 190
Query: 188 MLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIE 247
+ D DV+ WNAMI GY++ +E A +F +M +KNV +W +M+ G R G +
Sbjct: 191 VFD--AMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVR 248
Query: 248 NARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQR--EKIKPSRHLLPSMLTV 305
A LF EM ER+ +SW+A+I G+ ++EAL +F +M++ + + P+ L S+
Sbjct: 249 EAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYA 308
Query: 306 CANVGSLDQ--GRWIHSFVERN---SIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR 360
C +G + G +H+ V N ++ D L +L+ MY G + A + +
Sbjct: 309 CGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLN--ESF 366
Query: 361 EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLF 420
++ + N +I +G E A LF ++ K + V++ +++ AG V R GLF
Sbjct: 367 DLQSCNIIINRYLKNGDLERAETLFERV---KSLHDKVSWTSMIDGYLEAGDVSRAFGLF 423
Query: 421 NSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESM---PVKPNVAVWGALLNACRI 477
+ + + + ++ L + L EA + M +KP + + LL++
Sbjct: 424 QKLH-----DKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGA 478
Query: 478 HGNVELGERVGWILL--------DMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERG 529
N++ G+ + ++ D+ +NS L ++YAK G +D + M ++
Sbjct: 479 TSNLDQGKHIHCVIAKTTACYDPDLILQNS-----LVSMYAKCGAIEDAYEIFAKMVQK- 532
Query: 530 IETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNT 581
+TV +SM+ MG S H + + ++M+D G PN+
Sbjct: 533 -DTVSWNSMI----------MGLSHHGLADKALNLFKEMLDS----GKKPNS 569
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 146/319 (45%), Gaps = 50/319 (15%)
Query: 178 SFGLFREARKMLDESGK--TQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNA 235
S G AR +LD+ + + V+ W +++ Y K G ++ A +F MP++N+ + NA
Sbjct: 54 SEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNA 113
Query: 236 MISGLARC------------------------------GMIENARTLFDEMGERDEISWS 265
M++G +C G E+A LFDEM ER+ +SW+
Sbjct: 114 MLTGYVKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWN 173
Query: 266 AIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLP--SMLTVCANVGSLDQGRWIHSFVE 323
++ G I+ ++A +VF M PSR ++ +M+ +++ + + +
Sbjct: 174 TLVTGLIRNGDMEKAKQVFDAM------PSRDVVSWNAMIKGYIENDGMEEAKLLFGDMS 227
Query: 324 RNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMK 383
++ V T+++ Y + G + A+ +F +M R + +W AMI G A + +A+
Sbjct: 228 EKNV----VTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALM 283
Query: 384 LFTKM--NGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFG---- 437
LF +M + + PNG T + + AC G+ R LG + + ++H G
Sbjct: 284 LFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAK 343
Query: 438 CVVDLLGRAGLVEEAEKFI 456
+V + +GL+ A+ +
Sbjct: 344 SLVHMYASSGLIASAQSLL 362
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 282 bits (722), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 167/566 (29%), Positives = 274/566 (48%), Gaps = 45/566 (7%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSI 107
KQ HA ++K L+ Y FN + A++VF IP ++ + + G
Sbjct: 188 KQLHAQVIKLESSSHLIAQNALIAMYVR--FNQMSDASRVFYGIPMKDLISWSSIIAGFS 245
Query: 108 ENGEPHKAISCYHKMMVLNS-RPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDV 166
+ G +A+S +M+ PN++ + + KAC+ G Q H +K L G+
Sbjct: 246 QLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNA 305
Query: 167 HIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM- 225
+ MYA G AR++ D+ + D WN +I G G + A VF M
Sbjct: 306 IAGCSLCDMYARCGFLNSARRVFDQIERP--DTASWNVIIAGLANNGYADEAVSVFSQMR 363
Query: 226 -----PDK---------------------------------NVGSWNAMISGLARCGMIE 247
PD ++ N++++ C +
Sbjct: 364 SSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLY 423
Query: 248 NARTLFDEM-GERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVC 306
LF++ D +SW+ I+ ++ E L +F M + +P + ++L C
Sbjct: 424 CCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGC 483
Query: 307 ANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWN 366
+ SL G +H + + + + + LIDMY KCG L A +F+ M R+V +W+
Sbjct: 484 VEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWS 543
Query: 367 AMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRV 426
+I G A G E+A+ LF +M +PN VTFVGVL AC+H G+VE GL L+ +M+
Sbjct: 544 TLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTE 603
Query: 427 YEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGER 486
+ I P EH CVVDLL RAG + EAE+FI+ M ++P+V VW LL+AC+ GNV L ++
Sbjct: 604 HGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQK 663
Query: 487 VGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVH 546
+L ++P NS + LL +++A +G W++ A +R MK+ ++ +PG S +++ K+H
Sbjct: 664 AAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIH 723
Query: 547 EFKMGDSSHPQMKEIYLMLEKMMDKL 572
F D HP+ +IY +L + ++
Sbjct: 724 IFFAEDIFHPERDDIYTVLHNIWSQM 749
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 120/475 (25%), Positives = 205/475 (43%), Gaps = 55/475 (11%)
Query: 43 SLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIY 102
SL ++ H IL + +D ++ +L Y + A +VFD +P N+
Sbjct: 82 SLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCG--SLRDAREVFDFMPERNLVSYTSV 139
Query: 103 LKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGL 162
+ G +NG+ +AI Y KM+ + P++F + ++ KACA + V G Q HA V+K
Sbjct: 140 ITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLES 199
Query: 163 TGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCG-EVEA---- 217
+ + ++A I MY F +A ++ G D+I W+++I G+ + G E EA
Sbjct: 200 SSHLIAQNALIAMYVRFNQMSDASRVF--YGIPMKDLISWSSIIAGFSQLGFEFEALSHL 257
Query: 218 ----------ANEVFVNMPDKNVGS-----WNAMISGL--------------------AR 242
NE K S + + I GL AR
Sbjct: 258 KEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYAR 317
Query: 243 CGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSM 302
CG + +AR +FD++ D SW+ II G EA+ VF QM+ P L S+
Sbjct: 318 CGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSL 377
Query: 303 LTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREV 362
L +L QG IHS++ + D + +L+ MY C L + +FE +
Sbjct: 378 LCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNAD 437
Query: 363 S-TWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFN 421
S +WN ++ H + + ++LF M + +P+ +T +L C ++ G
Sbjct: 438 SVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLG----- 492
Query: 422 SMKRVYEIE----PEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALL 472
S Y ++ PE ++D+ + G + +A + +SM + +V W L+
Sbjct: 493 SQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNR-DVVSWSTLI 546
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 131/292 (44%), Gaps = 40/292 (13%)
Query: 268 IDGYIKQRCFKEALEVFHQMQRE---KIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVER 324
I+ K ++EALE F Q+ KI+ ++ S++ C++ SL QGR IH +
Sbjct: 38 INSLCKSNFYREALEAFDFAQKNSSFKIRLRTYI--SLICACSSSRSLAQGRKIHDHILN 95
Query: 325 NSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKL 384
++ + D +L ++ MY KCG L A EVF+ M R + ++ ++I G + +G+ +A++L
Sbjct: 96 SNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRL 155
Query: 385 FTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGL------------------------- 419
+ KM E P+ F ++ ACA + V G L
Sbjct: 156 YLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVR 215
Query: 420 FNSM---KRVYEIEP--EMEHFGCVVDLLGRAGLVEEAEKFIESM----PVKPNVAVWGA 470
FN M RV+ P ++ + ++ + G EA ++ M PN ++G+
Sbjct: 216 FNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGS 275
Query: 471 LLNACRIHGNVELGERVGWILLDME-PRNSGRYALLSNIYAKAGRWDDVARV 521
L AC + G ++ + + E N+ L ++YA+ G + RV
Sbjct: 276 SLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRV 327
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 97/222 (43%), Gaps = 7/222 (3%)
Query: 43 SLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIY 102
SL+ Q H LKT + F+ L+ YA + A ++FD + +V +
Sbjct: 488 SLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCG--SLGQARRIFDSMDNRDVVSWSTL 545
Query: 103 LKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFV-VKQG 161
+ G ++G +A+ + +M PN T+ + AC+ G V+EG++ +A + + G
Sbjct: 546 IVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHG 605
Query: 162 LTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEV---EAA 218
++ S + + A G EA + +DE K + DV+ W ++ G V + A
Sbjct: 606 ISPTKEHCSCVVDLLARAGRLNEAERFIDEM-KLEPDVVVWKTLLSACKTQGNVHLAQKA 664
Query: 219 NEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERD 260
E + + N + + S A G ENA L M + D
Sbjct: 665 AENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHD 706
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 282 bits (722), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 169/559 (30%), Positives = 277/559 (49%), Gaps = 49/559 (8%)
Query: 48 KQAHAIILKTAHFHDHFVSGT-LLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGS 106
+Q H +++ D +GT L+ YA A VF R +VF N + G
Sbjct: 80 QQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGL--MRRAVLVFGGSER-DVFGYNALISGF 136
Query: 107 IENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDV 166
+ NG P A+ Y +M P+K+T+P+L K + + + H K G D
Sbjct: 137 VVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAM-ELSDVKKVHGLAFKLGFDSDC 195
Query: 167 HIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMP 226
++ S + Y+ F +A+K+ DE + D + WNA+++GY + E A VF M
Sbjct: 196 YVGSGLVTSYSKFMSVEDAQKVFDEL-PDRDDSVLWNALVNGYSQIFRFEDALLVFSKMR 254
Query: 227 DKNVGSW---------------------------------------NAMISGLARCGMIE 247
++ VG NA+I + +E
Sbjct: 255 EEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLE 314
Query: 248 NARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCA 307
A ++F+ M ERD +W++++ + L +F +M I+P L ++L C
Sbjct: 315 EANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCG 374
Query: 308 NVGSLDQGRWIHSFV----ERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVS 363
+ SL QGR IH ++ N + + +L+DMYVKCG L A VF+ M+V++ +
Sbjct: 375 RLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSA 434
Query: 364 TWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSM 423
+WN MI G + E A+ +F+ M KP+ +TFVG+L AC+H+G + G M
Sbjct: 435 SWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQM 494
Query: 424 KRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVEL 483
+ VY I P +H+ CV+D+LGRA +EEA + S P+ N VW ++L++CR+HGN +L
Sbjct: 495 ETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDL 554
Query: 484 GERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGG 543
G L ++EP + G Y L+SN+Y +AG++++V VR M+++ ++ PG S + +
Sbjct: 555 ALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKN 614
Query: 544 KVHEFKMGDSSHPQMKEIY 562
VH F G+ +HP+ K I+
Sbjct: 615 GVHTFFTGNQTHPEFKSIH 633
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 281 bits (720), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 163/547 (29%), Positives = 279/547 (51%), Gaps = 43/547 (7%)
Query: 84 ATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAV 143
A +FD +P +V + G + +A C+H+M+ + PN+FT ++ K+C
Sbjct: 64 ARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRN 123
Query: 144 TGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWN 203
+ G H VVK G+ G +++ +A + MYA+ + EA ++ K + DV W
Sbjct: 124 MKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVT-WT 182
Query: 204 AMIDGYLKCGE-----------------------------------VEAANEVFVNMPDK 228
+I G+ G+ V ++ ++ +
Sbjct: 183 TLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKR 242
Query: 229 ----NVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVF 284
N+ N+++ RCG + A+ F EM ++D I+W+ +I +++ EAL +F
Sbjct: 243 GFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISE-LERSDSSEALLMF 301
Query: 285 HQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKC 344
+ + + P+ + S++ CAN+ +L+ G+ +H + R + L ALIDMY KC
Sbjct: 302 QRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKC 361
Query: 345 GRLDMAWEVF-EKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGV 403
G + + VF E + R + +W +M+ G HG +A++LF KM +P+ + F+ V
Sbjct: 362 GNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAV 421
Query: 404 LNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKP 463
L+AC HAG+VE+GL FN M+ Y I P+ + + CVVDLLGRAG + EA + +E MP KP
Sbjct: 422 LSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKP 481
Query: 464 NVAVWGALLNACRIHGNVELGERVGW-ILLDMEPRNSGRYALLSNIYAKAGRWDDVARVR 522
+ + WGA+L AC+ H + L R+ +++++P+ G Y +LS IYA G+W D ARVR
Sbjct: 482 DESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVR 541
Query: 523 KLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTS 582
K+M+ G + G S + + +V F + D P +Y +L ++++ + GY P
Sbjct: 542 KMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGYVPELD 601
Query: 583 MVSYDIE 589
+ D E
Sbjct: 602 SLVNDQE 608
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 112/232 (48%), Gaps = 5/232 (2%)
Query: 244 GMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSML 303
G++E AR+LFDEM +RD ++W+A+I GY A E FH+M ++ P+ L S+L
Sbjct: 59 GLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVL 118
Query: 304 TVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCG-RLDMAWEVFEKMKVREV 362
C N+ L G +H V + ++ + A+++MY C ++ A +F +KV+
Sbjct: 119 KSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKND 178
Query: 363 STWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNS 422
TW +I G G +K++ +M E + + A A V G + S
Sbjct: 179 VTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHAS 238
Query: 423 -MKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLN 473
+KR + + + ++DL R G + EA+ + M K ++ W L++
Sbjct: 239 VIKRGF--QSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDK-DLITWNTLIS 287
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 281 bits (720), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 185/615 (30%), Positives = 288/615 (46%), Gaps = 90/615 (14%)
Query: 46 HLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKG 105
H+ Q HA I+ + D+F++ L+ Y + F A VFD I N F N L
Sbjct: 40 HVLQLHARIVVFSIKPDNFLASKLISFYTRQD--RFRQALHVFDEITVRNAFSYNALLIA 97
Query: 106 SIENGEPHKAIS---------CYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGV---QF 153
A S CY +RP+ + + KA + G Q
Sbjct: 98 YTSREMYFDAFSLFLSWIGSSCYSSDA---ARPDSISISCVLKALSGCDDFWLGSLARQV 154
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCG 213
H FV++ G DV + + I Y ARK+ DE ++ DV+ WN+MI GY + G
Sbjct: 155 HGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDE--MSERDVVSWNSMISGYSQSG 212
Query: 214 EVEAANEVFVNM-------PDK---------------------------------NVGSW 233
E +++ M P+ ++
Sbjct: 213 SFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLC 272
Query: 234 NAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQ----- 288
NA+I A+CG ++ AR LFDEM E+D +++ AII GY+ KEA+ +F +M+
Sbjct: 273 NAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLS 332
Query: 289 ----------------------REKIK----PSRHLLPSMLTVCANVGSLDQGRWIHSFV 322
RE I+ P+ L S+L +L G+ IH+F
Sbjct: 333 TWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFA 392
Query: 323 ERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAM 382
RN + + T++ID Y K G L A VF+ K R + W A+I A+HG ++ A
Sbjct: 393 IRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSAC 452
Query: 383 KLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDL 442
LF +M KP+ VT VL+A AH+G + +F+SM Y+IEP +EH+ C+V +
Sbjct: 453 SLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSV 512
Query: 443 LGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRY 502
L RAG + +A +FI MP+ P VWGALLN + G++E+ L +MEP N+G Y
Sbjct: 513 LSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNY 572
Query: 503 ALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIY 562
+++N+Y +AGRW++ VR MK G++ +PG+S ++ + F DSS + KE+Y
Sbjct: 573 TIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMY 632
Query: 563 LMLEKMMDKLQIEGY 577
++E +++ + + Y
Sbjct: 633 EIIEGLVESMSDKEY 647
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 155/452 (34%), Positives = 251/452 (55%), Gaps = 37/452 (8%)
Query: 84 ATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAV 143
A ++FD I ++ + G + + +A+ Y +M+ +P++ L A A
Sbjct: 258 AEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASAR 317
Query: 144 TGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWN 203
+ +G+Q H +VK+G +++ I YA + A + + S K
Sbjct: 318 SVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVK--------- 368
Query: 204 AMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEIS 263
++ S NA+I+G + GM+E AR +FD+ ++D S
Sbjct: 369 ------------------------DHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFS 404
Query: 264 WSAIIDGYIKQRCFKEALEVFHQM-QREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFV 322
W+A+I GY + + AL +F +M ++KP + S+ + +++GSL++G+ H ++
Sbjct: 405 WNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYL 464
Query: 323 ERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMK---VREVSTWNAMIGGLAIHGRAE 379
++I + L A+IDMY KCG ++ A +F + K +S WNA+I G A HG A+
Sbjct: 465 NFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAK 524
Query: 380 DAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCV 439
A+ L++ + KPN +TFVGVL+AC HAG+VE G F SMK + IEP+++H+GC+
Sbjct: 525 LALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCM 584
Query: 440 VDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNS 499
VDLLG+AG +EEA++ I+ MPVK +V +WG LL+A R HGNVE+ E L ++P +
Sbjct: 585 VDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHG 644
Query: 500 GRYALLSNIYAKAGRWDDVARVRKLMKERGIE 531
G +LSN+YA AGRW+DVA VR+ M+ R +E
Sbjct: 645 GCKVMLSNVYADAGRWEDVALVREEMRTRDVE 676
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 129/520 (24%), Positives = 223/520 (42%), Gaps = 119/520 (22%)
Query: 84 ATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAV 143
A K+FD +P + +KG +N + +A+ + +M L N+ T T+ AC+
Sbjct: 126 ALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSH 185
Query: 144 TGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWN 203
G + + + +K L G V + + + MY ++ARK+ DE
Sbjct: 186 LGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDE------------ 233
Query: 204 AMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEIS 263
MP++N+ +WN M++G ++ G+IE A LFD++ E+D +S
Sbjct: 234 ---------------------MPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVS 272
Query: 264 WSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCA-NVGS----------- 311
W +IDG +++ EAL + +M R +KPS ++ +L+ A +VGS
Sbjct: 273 WGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIV 332
Query: 312 --------LDQGRWIHSFVERNSI-----QVDAVLG------TALIDMYVKCGRLDMAWE 352
Q IH + N I Q +A + ALI +VK G ++ A E
Sbjct: 333 KRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQARE 392
Query: 353 VFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKM-NGEKRKPNGVTFVGVLNACAHAG 411
VF++ +++ +WNAMI G A + A+ LF +M + + KP+ +T V V +A + G
Sbjct: 393 VFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLG 452
Query: 412 MVERGLGLFNSMKRVYE------IEPEMEHFGCVVDLLGRAGLVEEAEKF---------- 455
+E G KR ++ I P ++D+ + G +E A
Sbjct: 453 SLEEG-------KRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSS 505
Query: 456 ---------------------------IESMPVKPNVAVWGALLNACRIHGNVELGERVG 488
++S+P+KPN + +L+AC G VELG+
Sbjct: 506 TISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYF 565
Query: 489 WILLD---MEPRNSGRYALLSNIYAKAGRWDDVARVRKLM 525
+ +EP + Y + ++ KAGR ++ + K M
Sbjct: 566 ESMKSDHGIEP-DIKHYGCMVDLLGKAGRLEEAKEMIKKM 604
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 131/286 (45%), Gaps = 37/286 (12%)
Query: 140 ACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDV 199
+CA + V G Q H V+K GL + +I ++ + MYA L +A + + K D
Sbjct: 50 SCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAK--LDS 107
Query: 200 ICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGER 259
+N M+DGY++ + A ++F MP+++ S+ +I G
Sbjct: 108 ASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKG-------------------- 147
Query: 260 DEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIH 319
Y + + EA+E+F +M+ I + L ++++ C+++G + R +
Sbjct: 148 -----------YAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQ 196
Query: 320 SFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAE 379
S + ++ + T L+ MY C L A ++F++M R + TWN M+ G + G E
Sbjct: 197 SLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIE 256
Query: 380 DAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKR 425
A +LF ++ + + V++ +++ C ++ L + M R
Sbjct: 257 QAEELFDQIT----EKDIVSWGTMIDGCLRKNQLDEALVYYTEMLR 298
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 102/252 (40%), Gaps = 44/252 (17%)
Query: 272 IKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDA 331
++ RCF E R L+ S L CA+ + GR IH V ++ + +
Sbjct: 18 LQARCFSAPSRTHFDFSGESSDTERALV-SALGSCASSNDVTCGRQIHCRVLKSGLDSNG 76
Query: 332 VLGTALIDMYVKC-------------GRLDMA---------------WE---VFEKMKVR 360
+ ++++MY KC +LD A W+ +F+ M R
Sbjct: 77 YICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPER 136
Query: 361 EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMV-----ER 415
++ +I G A + + +AM+LF +M N VT V++AC+H G + +
Sbjct: 137 SCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQ 196
Query: 416 GLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNAC 475
L + ++ + + H C+ L ++A K + MP + N+ W +LN
Sbjct: 197 SLAIKLKLEGRVFVSTNLLHMYCLCLCL------KDARKLFDEMPER-NLVTWNVMLNGY 249
Query: 476 RIHGNVELGERV 487
G +E E +
Sbjct: 250 SKAGLIEQAEEL 261
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 166/526 (31%), Positives = 272/526 (51%), Gaps = 48/526 (9%)
Query: 29 QKTVLDILNKKCFHSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVF 88
QK + D+ + C +++ + + H ++KT D F LL A + + A+ +F
Sbjct: 29 QKLINDL--RSCRDTVE-VSRIHGYMVKTGLDKDDFAVSKLL---AFSSVLDIRYASSIF 82
Query: 89 DCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVK 148
+ + N+F+ N ++G + EP +A S ++++ ++F++ T K+C+ V
Sbjct: 83 EHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVS 142
Query: 149 EGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDG 208
G H ++ G +++A I Y G +ARK+ DE ++ D + ++ +++G
Sbjct: 143 IGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQS-VDAVTFSTLMNG 201
Query: 209 YLKCGEVEAA---------NEVFVNMP------------------------------DKN 229
YL+ + A +EV VN+ D +
Sbjct: 202 YLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLD 261
Query: 230 VGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQR 289
+ A+I + G I +AR +FD +D ++W+ +ID Y K +E + + QM+
Sbjct: 262 LHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKY 321
Query: 290 EKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDM 349
EK+KP+ +L+ CA + GR + +E I +DA+LGTAL+DMY K G L+
Sbjct: 322 EKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEK 381
Query: 350 AWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGE--KRKPNGVTFVGVLNAC 407
A E+F +MK ++V +W AMI G HG A +A+ LF KM E K +PN +TF+ VLNAC
Sbjct: 382 AVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNAC 441
Query: 408 AHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAV 467
+H G+V G+ F M Y P++EH+GCVVDLLGRAG +EEA + I ++P+ +
Sbjct: 442 SHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTA 501
Query: 468 WGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAG 513
W ALL ACR++GN +LGE V L +M + LL+ +A AG
Sbjct: 502 WRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAG 547
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 153/496 (30%), Positives = 272/496 (54%), Gaps = 40/496 (8%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLL----KCYANPNFNNFTLATKVFDCIPRPNVFVCNIYL 103
K+ HA I+KT D +S LL KC + A +VFD +P+P + N +
Sbjct: 54 KKIHADIIKTGFQPDLNISIKLLILHLKC------GCLSYARQVFDELPKPTLSAYNYMI 107
Query: 104 KGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLT 163
G +++G + + +M + + +T + KA GS ++ + L
Sbjct: 108 SGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGST--------MILPRSLC 159
Query: 164 GDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFV 223
VH + + + D + A++D Y+K G++E+A VF
Sbjct: 160 RLVHARIIKCDV--------------------ELDDVLITALVDTYVKSGKLESARTVFE 199
Query: 224 NMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQ-RCFKEALE 282
M D+NV +MISG G +E+A +F+ +D + ++A+++G+ + K +++
Sbjct: 200 TMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVD 259
Query: 283 VFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYV 342
++ MQR P+ S++ C+ + S + G+ +H+ + ++ + +G++L+DMY
Sbjct: 260 MYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYA 319
Query: 343 KCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVG 402
KCG ++ A VF++M+ + V +W +MI G +G E+A++LFT+M + +PN VTF+G
Sbjct: 320 KCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLG 379
Query: 403 VLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVK 462
L+AC+H+G+V++G +F SM+R Y ++P+MEH+ C+VDL+GRAG + +A +F +MP +
Sbjct: 380 ALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPER 439
Query: 463 PNVAVWGALLNACRIHGNVELGERVGWILLDMEP-RNSGRYALLSNIYAKAGRWDDVARV 521
P+ +W ALL++C +HGNVEL L + + G Y LSN+YA +WD+V+++
Sbjct: 440 PDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKI 499
Query: 522 RKLMKERGIETVPGSS 537
R++MK R I G S
Sbjct: 500 REVMKRRRISKTIGRS 515
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 123/307 (40%), Gaps = 85/307 (27%)
Query: 315 GRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAI 374
G+ IH+ + + Q D + L+ +++KCG L A +VF+++ +S +N MI G
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 375 HGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAG---MVERGL-------------- 417
HG ++ + L +M+ K +G T VL A G ++ R L
Sbjct: 113 HGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVE 172
Query: 418 ----------------GLFNSMKRVYEIEPEMEHFGCVVDLLG---RAGLVEEAEKFIES 458
G S + V+E + E+ C ++ G VE+AE+ +
Sbjct: 173 LDDVLITALVDTYVKSGKLESARTVFETMKD-ENVVCCTSMISGYMNQGFVEDAEEIFNT 231
Query: 459 MPVK-----------------------------------PNVAVWGALLNACRIHGNVEL 483
VK PN++ + +++ AC + + E+
Sbjct: 232 TKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEV 291
Query: 484 GERVGWILLDMEPRNSGRY------ALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSS 537
G++V ++ SG Y + L ++YAK G +D RV M+E+ + +S
Sbjct: 292 GQQVHAQIM-----KSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNV--FSWTS 344
Query: 538 MMDMGGK 544
M+D GK
Sbjct: 345 MIDGYGK 351
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 171/534 (32%), Positives = 262/534 (49%), Gaps = 47/534 (8%)
Query: 51 HAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENG 110
H IL++ D +V LL Y N F +A VFD + +V N + G NG
Sbjct: 140 HGRILRSWFGRDKYVQNALLAMYMN--FGKVEMARDVFDVMKNRDVISWNTMISGYYRNG 197
Query: 111 EPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKS 170
+ A+ + M+ + + T ++ C ++ G H V ++ L + +K+
Sbjct: 198 YMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKN 257
Query: 171 AGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM----- 225
A + MY G EAR + D + DVI W MI+GY + G+VE A E+ M
Sbjct: 258 ALVNMYLKCGRMDEARFVFDR--MERRDVITWTCMINGYTEDGDVENALELCRLMQFEGV 315
Query: 226 -PD--------------------KNVGSW-------------NAMISGLARCGMIENART 251
P+ K + W ++IS A+C ++
Sbjct: 316 RPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFR 375
Query: 252 LFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGS 311
+F + WSAII G ++ +AL +F +M+RE ++P+ L S+L A +
Sbjct: 376 VFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALAD 435
Query: 312 LDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVF----EKMKVREVSTWNA 367
L Q IH ++ + T L+ +Y KCG L+ A ++F EK K ++V W A
Sbjct: 436 LRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGA 495
Query: 368 MIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVY 427
+I G +HG +A+++F +M PN +TF LNAC+H+G+VE GL LF M Y
Sbjct: 496 LISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHY 555
Query: 428 EIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERV 487
+ H+ C+VDLLGRAG ++EA I ++P +P VWGALL AC H NV+LGE
Sbjct: 556 KTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMA 615
Query: 488 GWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDM 541
L ++EP N+G Y LL+NIYA GRW D+ +VR +M+ G+ PG S +++
Sbjct: 616 ANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 131/495 (26%), Positives = 230/495 (46%), Gaps = 58/495 (11%)
Query: 39 KCFHSLQHLKQAHAIILKTAHFHDHFVSG---------TLLKCYANPNFNNFTLATKVFD 89
K + SL + A I KT H H ++G TL YA + T A K+F+
Sbjct: 16 KQYQSLLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCG--HITYARKLFE 73
Query: 90 CIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMV--LNSRPNKFTYPTLFKACAVTGSV 147
+P+ ++ NI ++ + G H AIS + +M+ + P+ +TYP + KA S+
Sbjct: 74 EMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSM 133
Query: 148 KEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMID 207
K G+ H +++ D ++++A + MY +FG AR + D DVI WN MI
Sbjct: 134 KLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDV--MKNRDVISWNTMIS 191
Query: 208 GYLK--------------------------------CG---EVEAANEVFVNMPDKNVGS 232
GY + CG ++E V + +K +G
Sbjct: 192 GYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGD 251
Query: 233 ----WNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQ 288
NA+++ +CG ++ AR +FD M RD I+W+ +I+GY + + ALE+ MQ
Sbjct: 252 KIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQ 311
Query: 289 REKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLD 348
E ++P+ + S+++VC + ++ G+ +H + R + D ++ T+LI MY KC R+D
Sbjct: 312 FEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVD 371
Query: 349 MAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACA 408
+ + VF W+A+I G + DA+ LF +M E +PN T +L A A
Sbjct: 372 LCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYA 431
Query: 409 HAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVK---PNV 465
+ + + + + + ++ +V + + G +E A K + K +V
Sbjct: 432 ALADLRQAMNIHCYLTKT-GFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDV 490
Query: 466 AVWGALLNACRIHGN 480
+WGAL++ +HG+
Sbjct: 491 VLWGALISGYGMHGD 505
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 125/246 (50%), Gaps = 8/246 (3%)
Query: 241 ARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIK--PSRHL 298
A CG I AR LF+EM + +S++ +I Y+++ + +A+ VF +M E +K P +
Sbjct: 60 ALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYT 119
Query: 299 LPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMK 358
P + + S+ G +H + R+ D + AL+ MY+ G+++MA +VF+ MK
Sbjct: 120 YPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMK 179
Query: 359 VREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLG 418
R+V +WN MI G +G DA+ +F M E + T V +L C H +E G
Sbjct: 180 NRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGR- 238
Query: 419 LFNSMKRVYE--IEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACR 476
N K V E + ++E +V++ + G ++EA + M + +V W ++N
Sbjct: 239 --NVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME-RRDVITWTCMINGYT 295
Query: 477 IHGNVE 482
G+VE
Sbjct: 296 EDGDVE 301
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 170/569 (29%), Positives = 298/569 (52%), Gaps = 46/569 (8%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSI 107
+Q H +++K + + +V +L+ YA A + F I PN N + G +
Sbjct: 121 EQVHGLVIKGGYECNVYVGSSLVDMYAKCE--RVEDAFEAFKEISEPNSVSWNALIAGFV 178
Query: 108 ENGEPHKAISCYHKM-MVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDV 166
+ + A M M + T+ L Q HA V+K GL ++
Sbjct: 179 QVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEI 238
Query: 167 HIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMP 226
I +A I YA G +A+++ D G ++ D+I WN+MI G+ K E+A E+F+ M
Sbjct: 239 TICNAMISSYADCGSVSDAKRVFDGLGGSK-DLISWNSMIAGFSKHELKESAFELFIQMQ 297
Query: 227 ---------------------------------------DKNVGSWNAMISGLAR--CGM 245
++ + NA+IS + G
Sbjct: 298 RHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGT 357
Query: 246 IENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTV 305
+E+A +LF+ + +D ISW++II G+ ++ ++A++ F ++ +IK + ++L
Sbjct: 358 MEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRS 417
Query: 306 CANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVST- 364
C+++ +L G+ IH+ ++ + + ++LI MY KCG ++ A + F+++ + +
Sbjct: 418 CSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVA 477
Query: 365 WNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMK 424
WNAMI G A HG + ++ LF++M + K + VTF +L AC+H G+++ GL L N M+
Sbjct: 478 WNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLME 537
Query: 425 RVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELG 484
VY+I+P MEH+ VDLLGRAGLV +A++ IESMP+ P+ V L CR G +E+
Sbjct: 538 PVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMA 597
Query: 485 ERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGK 544
+V LL++EP + Y LS++Y+ +W++ A V+K+MKERG++ VPG S +++ +
Sbjct: 598 TQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQ 657
Query: 545 VHEFKMGDSSHPQMKEIYLMLEKMMDKLQ 573
V F D S+P ++IY+M++ + ++Q
Sbjct: 658 VKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 108/510 (21%), Positives = 192/510 (37%), Gaps = 110/510 (21%)
Query: 44 LQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYL 103
Q L H +K D +VS +L Y F + A +FD +P+ + N +
Sbjct: 16 FQKLSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGY--ANMLFDEMPKRDSVSWNTMI 73
Query: 104 KGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLT 163
G G+ A + M S + +++ L K A G Q H V+K G
Sbjct: 74 SGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYE 133
Query: 164 GDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFV 223
+V++ S+ + MYA KC VE A E F
Sbjct: 134 CNVYVGSSLVDMYA---------------------------------KCERVEDAFEAFK 160
Query: 224 NMPDKNVGSWNAMISGLARCGMIENA-----------------------RTLFDE----- 255
+ + N SWNA+I+G + I+ A TL D+
Sbjct: 161 EISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCN 220
Query: 256 -----------MGERDEIS-WSAIIDGYIKQRCFKEALEVF------------------- 284
+G + EI+ +A+I Y +A VF
Sbjct: 221 LLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGF 280
Query: 285 --HQMQREK----IKPSRHLLPS-------MLTVCANVGSLDQGRWIHSFVERNSIQVDA 331
H+++ I+ RH + + +L+ C+ G+ +H V + ++
Sbjct: 281 SKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVT 340
Query: 332 VLGTALIDMYVK--CGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMN 389
ALI MY++ G ++ A +FE +K +++ +WN++I G A G +EDA+K F+ +
Sbjct: 341 SATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLR 400
Query: 390 GEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLV 449
+ K + F +L +C+ ++ G + + + E +V + + G++
Sbjct: 401 SSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIV-MYSKCGII 459
Query: 450 EEAEKFIESMPVKPNVAVWGALLNACRIHG 479
E A K + + K + W A++ HG
Sbjct: 460 ESARKCFQQISSKHSTVAWNAMILGYAQHG 489
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 278 bits (711), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 154/527 (29%), Positives = 270/527 (51%), Gaps = 44/527 (8%)
Query: 84 ATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKM-MVLNSRPNKFTYPTLFKACA 142
A ++FD + +P++ + + G +NG P++A+ + +M M + P++ T TL AC
Sbjct: 115 ALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACT 174
Query: 143 VTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICW 202
+ + G H FV+++G + D+ + ++ + YA F+EA + + DVI W
Sbjct: 175 KLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIA--EKDVISW 232
Query: 203 NAMIDGYLKCGEVEAANEVFVNMPDK----NVGSW------------------------- 233
+ +I Y++ G A VF +M D NV +
Sbjct: 233 STVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIR 292
Query: 234 ----------NAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEV 283
A++ +C E A +F + +D +SW A+I G+ ++E
Sbjct: 293 KGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEE 352
Query: 284 FHQMQREK-IKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYV 342
F M E +P L+ +L C+ +G L+Q + HS+V + + +G +L+++Y
Sbjct: 353 FSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYS 412
Query: 343 KCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKM-NGEKRKPNGVTFV 401
+CG L A +VF + +++ W ++I G IHG+ A++ F M + KPN VTF+
Sbjct: 413 RCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFL 472
Query: 402 GVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPV 461
+L+AC+HAG++ GL +F M Y + P +EH+ +VDLLGR G ++ A + + MP
Sbjct: 473 SILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPF 532
Query: 462 KPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARV 521
P + G LL ACRIH N E+ E V L ++E ++G Y L+SN+Y G W++V ++
Sbjct: 533 SPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKL 592
Query: 522 RKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKM 568
R +K+RGI+ S++++ KVH F D HP+ + +Y +L+++
Sbjct: 593 RNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKEL 639
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 119/444 (26%), Positives = 202/444 (45%), Gaps = 46/444 (10%)
Query: 78 FNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTL 137
F++ A ++F + + +++ N LK + + + + M +P+ FT P
Sbjct: 7 FSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVA 66
Query: 138 FKACAVTGSVKEGVQFHAFVVKQ-GLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQ 196
KAC V G H FV K L D+++ S+ I MY G EA +M DE K
Sbjct: 67 LKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEK-- 124
Query: 197 TDVICWNAMIDGYLKCGEVEAANEVFVNM-------PDK--------------------- 228
D++ W++M+ G+ K G A E F M PD+
Sbjct: 125 PDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRC 184
Query: 229 ------------NVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRC 276
++ N++++ A+ + A LF + E+D ISWS +I Y++
Sbjct: 185 VHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGA 244
Query: 277 FKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTA 336
EAL VF+ M + +P+ + +L CA L+QGR H R ++ + + TA
Sbjct: 245 AAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTA 304
Query: 337 LIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKR-KP 395
L+DMY+KC + A+ VF ++ ++V +W A+I G ++G A +++ F+ M E +P
Sbjct: 305 LVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRP 364
Query: 396 NGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKF 455
+ + V VL +C+ G +E+ F+S Y + +V+L R G + A K
Sbjct: 365 DAILMVKVLGSCSELGFLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKV 423
Query: 456 IESMPVKPNVAVWGALLNACRIHG 479
+ +K V VW +L+ IHG
Sbjct: 424 FNGIALKDTV-VWTSLITGYGIHG 446
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 129/275 (46%), Gaps = 35/275 (12%)
Query: 248 NARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCA 307
+AR +F EM +R W+ ++ +++ ++E L F M R++ KP LP L C
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 308 NVGSLDQGRWIHSFVERN-SIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWN 366
+ ++ G IH FV+++ ++ D +G++LI MY+KCGR+ A +F++++ ++ TW+
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 367 AMIGGLAIHGRAEDAMKLFTKM-NGEKRKPNGVTFVGVLNACA-----------HAGMVE 414
+M+ G +G A++ F +M P+ VT + +++AC H ++
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR 191
Query: 415 RG----LGLFNSMKRVYE---------------IEPEMEHFGCVVDLLGRAGLVEEAEKF 455
RG L L NS+ Y E ++ + V+ + G EA
Sbjct: 192 RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLV 251
Query: 456 IESM---PVKPNVAVWGALLNACRIHGNVELGERV 487
M +PNVA +L AC ++E G +
Sbjct: 252 FNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKT 286
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 163/381 (42%), Gaps = 47/381 (12%)
Query: 51 HAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENG 110
H +++ +D + +LL CYA F A +F I +V + + ++NG
Sbjct: 186 HGFVIRRGFSNDLSLVNSLLNCYAKSR--AFKEAVNLFKMIAEKDVISWSTVIACYVQNG 243
Query: 111 EPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKS 170
+A+ ++ MM + PN T + +ACA +++G + H +++GL +V + +
Sbjct: 244 AAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVST 303
Query: 171 AGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM----- 225
A + MY EA + S + DV+ W A+I G+ G + E F M
Sbjct: 304 ALVDMYMKCFSPEEAYAVF--SRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENN 361
Query: 226 --PD-----KNVGSWN----------------------------AMISGLARCGMIENAR 250
PD K +GS + +++ +RCG + NA
Sbjct: 362 TRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNAS 421
Query: 251 TLFDEMGERDEISWSAIIDGYIKQRCFKEALEVF-HQMQREKIKPSRHLLPSMLTVCANV 309
+F+ + +D + W+++I GY +ALE F H ++ ++KP+ S+L+ C++
Sbjct: 422 KVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHA 481
Query: 310 GSLDQG-RWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREV-STWNA 367
G + +G R V + + L+D+ + G LD A E+ ++M
Sbjct: 482 GLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGT 541
Query: 368 MIGGLAIHGRAEDAMKLFTKM 388
++G IH E A + K+
Sbjct: 542 LLGACRIHQNGEMAETVAKKL 562
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 162/555 (29%), Positives = 273/555 (49%), Gaps = 44/555 (7%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSI 107
+ H +++K+ + D V+ +L+ YA FN F + +VFD +P +V N +
Sbjct: 127 RMIHTLVVKSGYVCDVVVASSLVGMYAK--FNLFENSLQVFDEMPERDVASWNTVISCFY 184
Query: 108 ENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVH 167
++GE KA+ + +M PN + AC+ ++ G + H VK+G D +
Sbjct: 185 QSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEY 244
Query: 168 IKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM-- 225
+ SA + MY AR++ + + ++ WN+MI GY+ G+ ++ E+ M
Sbjct: 245 VNSALVDMYGKCDCLEVAREVFQKMPRKS--LVAWNSMIKGYVAKGDSKSCVEILNRMII 302
Query: 226 ----PDKNVGSWNAMISGLAR---------------------------------CGMIEN 248
P + + M +R CG
Sbjct: 303 EGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANL 362
Query: 249 ARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCAN 308
A T+F + + SW+ +I YI + +A+EV+ QM +KP S+L C+
Sbjct: 363 AETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQ 422
Query: 309 VGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAM 368
+ +L++G+ IH + + ++ D +L +AL+DMY KCG A+ +F + ++V +W M
Sbjct: 423 LAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVM 482
Query: 369 IGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYE 428
I HG+ +A+ F +M KP+GVT + VL+AC HAG+++ GL F+ M+ Y
Sbjct: 483 ISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYG 542
Query: 429 IEPEMEHFGCVVDLLGRAGLVEEAEKFIESMP-VKPNVAVWGALLNACRIHGNVELGERV 487
IEP +EH+ C++D+LGRAG + EA + I+ P N + L +AC +H LG+R+
Sbjct: 543 IEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRI 602
Query: 488 GWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHE 547
+L++ P ++ Y +L N+YA WD RVR MKE G+ PG S ++M KV
Sbjct: 603 ARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCH 662
Query: 548 FKMGDSSHPQMKEIY 562
F D SH + + +Y
Sbjct: 663 FFAEDRSHLRAENVY 677
Score = 186 bits (472), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 130/486 (26%), Positives = 219/486 (45%), Gaps = 61/486 (12%)
Query: 43 SLQHLKQAHAIILKTAHFHDHFVSGTLLK--------CYANPNFNNFTLATKVFDCIPRP 94
SL+ +K H IL D + +L+ C A F NF + R
Sbjct: 19 SLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDI---------RS 69
Query: 95 NVFVCNIYLKGSIENGEPHKAISCYHKMMVLN-SRPNKFTYPTLFKACAVTGSVKEGVQF 153
+V++ N + G +N H + + +++ + P+ FT+P + KA G G
Sbjct: 70 DVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMI 129
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCG 213
H VVK G DV + S+ + MYA F LF + ++ DE + DV WN +I + + G
Sbjct: 130 HTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDE--MPERDVASWNTVISCFYQSG 187
Query: 214 EVEAANEVFVNMP----DKNVGSWNAMISGLAR--------------------------- 242
E E A E+F M + N S IS +R
Sbjct: 188 EAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNS 247
Query: 243 --------CGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKP 294
C +E AR +F +M + ++W+++I GY+ + K +E+ ++M E +P
Sbjct: 248 ALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRP 307
Query: 295 SRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVF 354
S+ L S+L C+ +L G++IH +V R+ + D + +LID+Y KCG ++A VF
Sbjct: 308 SQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVF 367
Query: 355 EKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVE 414
K + +WN MI G A++++ +M KP+ VTF VL AC+ +E
Sbjct: 368 SKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALE 427
Query: 415 RGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNA 474
+G + S+ +E + ++D+ + G +EA + S+P K +V W +++A
Sbjct: 428 KGKQIHLSISES-RLETDELLLSALLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMISA 485
Query: 475 CRIHGN 480
HG
Sbjct: 486 YGSHGQ 491
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 161/355 (45%), Gaps = 48/355 (13%)
Query: 44 LQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYL 103
L+ K+ H +K D +V+ L+ Y + +A +VF +PR ++ N +
Sbjct: 224 LERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDC--LEVAREVFQKMPRKSLVAWNSMI 281
Query: 104 KGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLT 163
KG + G+ + ++M++ +RP++ T ++ AC+ + ++ G H +V++ +
Sbjct: 282 KGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVN 341
Query: 164 GDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVI-CWNAMIDGYLKCGEVEAANEVF 222
D+++ + I +Y G EA KTQ DV WN MI Y+ G A EV+
Sbjct: 342 ADIYVNCSLIDLYFKCG---EANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVY 398
Query: 223 VNM------PDKNVGS---------------------------------WNAMISGLARC 243
M PD + +A++ ++C
Sbjct: 399 DQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKC 458
Query: 244 GMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSML 303
G + A +F+ + ++D +SW+ +I Y +EAL F +MQ+ +KP L ++L
Sbjct: 459 GNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVL 518
Query: 304 TVCANVGSLDQGRWIHSFVERNSIQVDAVLG--TALIDMYVKCGRLDMAWEVFEK 356
+ C + G +D+G S + R+ ++ ++ + +ID+ + GRL A+E+ ++
Sbjct: 519 SACGHAGLIDEGLKFFSQM-RSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQ 572
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 166/535 (31%), Positives = 271/535 (50%), Gaps = 55/535 (10%)
Query: 84 ATKVFD-CIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACA 142
A +FD C R V N + G + G + ++ KM + ++ KAC
Sbjct: 202 AMSLFDRCDERDQV-SWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACC 260
Query: 143 VT---GSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDV 199
+ G +++G+ H + K G+ D+ +++A + MYA G +EA K+ S +V
Sbjct: 261 INLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLF--SLMPSKNV 318
Query: 200 ICWNAMIDGYLKCGEV--EAANE---VFVNM----------------------------- 225
+ +NAMI G+L+ E+ EA++E +F++M
Sbjct: 319 VTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGR 378
Query: 226 ------------PDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIK 273
D+ +GS A+I A G E+ F ++D SW+++ID +++
Sbjct: 379 QIHALICKNNFQSDEFIGS--ALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQ 436
Query: 274 QRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVL 333
+ A ++F Q+ I+P + + M++ CA+ +L G I + ++ I +
Sbjct: 437 NEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSV 496
Query: 334 GTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKR 393
T+ I MY K G + +A +VF +++ +V+T++AMI LA HG A +A+ +F M
Sbjct: 497 KTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGI 556
Query: 394 KPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAE 453
KPN F+GVL AC H G+V +GL F MK Y I P +HF C+VDLLGR G + +AE
Sbjct: 557 KPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAE 616
Query: 454 KFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAG 513
I S + + W ALL++CR++ + +G+RV L+++EP SG Y LL NIY +G
Sbjct: 617 NLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSG 676
Query: 514 RWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKM 568
VR+LM++RG++ P S + +G + H F + D SHP + IY MLE M
Sbjct: 677 VNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 153/330 (46%), Gaps = 49/330 (14%)
Query: 134 YPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESG 193
Y LF+ A +GSV G H ++K L +++ + + MY AR++ D
Sbjct: 50 YKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDR-- 107
Query: 194 KTQTDVICWNAMIDGYLKCGEVEAANEVF------------------------------- 222
+ ++I +N++I GY + G E A E+F
Sbjct: 108 MPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLG 167
Query: 223 --------VNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQ 274
VN + V N +I ++CG ++ A +LFD ERD++SW+++I GY++
Sbjct: 168 ELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRV 227
Query: 275 RCFKEALEVFHQMQREKIKPSRHLLPSMLTVCA---NVGSLDQGRWIHSFVERNSIQVDA 331
+E L + +M R+ + + + L S+L C N G +++G IH + + ++ D
Sbjct: 228 GAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDI 287
Query: 332 VLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAED-----AMKLFT 386
V+ TAL+DMY K G L A ++F M + V T+NAMI G D A KLF
Sbjct: 288 VVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFM 347
Query: 387 KMNGEKRKPNGVTFVGVLNACAHAGMVERG 416
M +P+ TF VL AC+ A +E G
Sbjct: 348 DMQRRGLEPSPSTFSVVLKACSAAKTLEYG 377
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 119/240 (49%), Gaps = 15/240 (6%)
Query: 242 RCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPS 301
+C + AR LFD M ER+ IS++++I GY + +++A+E+F + + +K +
Sbjct: 94 KCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAG 153
Query: 302 MLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVRE 361
L C LD G +H V N + L LIDMY KCG+LD A +F++ R+
Sbjct: 154 ALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERD 213
Query: 362 VSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACA---HAGMVERGLG 418
+WN++I G G AE+ + L KM+ + VL AC + G +E+G+
Sbjct: 214 QVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMA 273
Query: 419 LFNSMKRVYEIEPEMEHFGCVV-----DLLGRAGLVEEAEKFIESMPVKPNVAVWGALLN 473
+ Y + ME F VV D+ + G ++EA K MP K NV + A+++
Sbjct: 274 I-----HCYTAKLGME-FDIVVRTALLDMYAKNGSLKEAIKLFSLMPSK-NVVTYNAMIS 326
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 146/371 (39%), Gaps = 50/371 (13%)
Query: 51 HAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENG 110
H K D V LL YA + A K+F +P NV N + G ++
Sbjct: 275 HCYTAKLGMEFDIVVRTALLDMYAKNG--SLKEAIKLFSLMPSKNVVTYNAMISGFLQMD 332
Query: 111 E-----PHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGD 165
E +A + M P+ T+ + KAC+ +++ G Q HA + K D
Sbjct: 333 EITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSD 392
Query: 166 VHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM 225
I SA I++YA G + + + K D+ W +MID +++ ++E+A ++F +
Sbjct: 393 EFIGSALIELYALMGSTEDGMQCFASTSK--QDIASWTSMIDCHVQNEQLESAFDLFRQL 450
Query: 226 PDKNV--------------GSWNAMISG-------------------------LARCGMI 246
++ + A+ SG A+ G +
Sbjct: 451 FSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNM 510
Query: 247 ENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVC 306
A +F E+ D ++SA+I + EAL +F M+ IKP++ +L C
Sbjct: 511 PLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIAC 570
Query: 307 ANVGSLDQG-RWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVRE-VST 364
+ G + QG ++ I + T L+D+ + GRL A + ++ T
Sbjct: 571 CHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVT 630
Query: 365 WNAMIGGLAIH 375
W A++ ++
Sbjct: 631 WRALLSSCRVY 641
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 85/183 (46%), Gaps = 7/183 (3%)
Query: 302 MLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVRE 361
+ A GS+ G+ H + ++S+ L L++MY KC L A ++F++M R
Sbjct: 53 LFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERN 112
Query: 362 VSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFN 421
+ ++N++I G G E AM+LF + K + T+ G L C ++ G L +
Sbjct: 113 IISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLG-ELLH 171
Query: 422 SMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNV 481
+ V + ++ ++D+ + G +++A + + V+ W +L I G V
Sbjct: 172 GLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVS-WNSL-----ISGYV 225
Query: 482 ELG 484
+G
Sbjct: 226 RVG 228
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 154/513 (30%), Positives = 261/513 (50%), Gaps = 40/513 (7%)
Query: 42 HSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNI 101
+S+ HL Q HA ++ + +F D + LLK ++ F + + ++ I + ++ N
Sbjct: 33 NSITHLFQVHARLITSGNFWDSSWAIRLLK--SSSRFGDSSYTVSIYRSIGK--LYCANP 88
Query: 102 YLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQG 161
K + + P +A+ Y ++ P+ +T+ +L T V G H +K G
Sbjct: 89 VFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHG 148
Query: 162 LTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEV 221
+ ++++ + MY CG ++ A ++
Sbjct: 149 CDQVLPVQNSLMHMYTC---------------------------------CGALDLAKKL 175
Query: 222 FVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEAL 281
FV +P +++ SWN++I+G+ R G + A LFDEM +++ ISW+ +I Y+ ++
Sbjct: 176 FVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSI 235
Query: 282 EVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMY 341
+F +M R + + L +L C L +GR +H+ + R + V+ TALIDMY
Sbjct: 236 SLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMY 295
Query: 342 VKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFV 401
KC + +A +F+ + +R TWN MI +HGR E ++LF M +P+ VTFV
Sbjct: 296 GKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFV 355
Query: 402 GVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMP- 460
GVL CA AG+V +G ++ M ++I+P H C+ +L AG EEAE+ ++++P
Sbjct: 356 GVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPD 415
Query: 461 --VKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDV 518
V P W LL++ R GN LGE + L++ +P N Y LL NIY+ GRW+DV
Sbjct: 416 EDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDV 475
Query: 519 ARVRKLMKERGIETVPGSSMMDMGGKVHEFKMG 551
RVR+++KER I +PG ++D+ VH ++G
Sbjct: 476 NRVREMVKERKIGRIPGCGLVDLKEIVHGLRLG 508
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 141/330 (42%), Gaps = 30/330 (9%)
Query: 84 ATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAV 143
A K+FD +P N+ NI + + P +IS + +M+ + N+ T L AC
Sbjct: 203 AHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGR 262
Query: 144 TGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWN 203
+ +KEG HA +++ L V I +A I MY AR++ D + + + WN
Sbjct: 263 SARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDS--LSIRNKVTWN 320
Query: 204 AMIDGYLKCGEVEAANEVFVNM------PDKNVGSWNAMISGLARCGMIENARTLFDEMG 257
MI + G E E+F M PD+ ++ ++ G AR G++ ++ + M
Sbjct: 321 VMILAHCLHGRPEGGLELFEAMINGMLRPDEV--TFVGVLCGCARAGLVSQGQSYYSLMV 378
Query: 258 ERDEI------SWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGS 311
+ +I W + + Y +EA E + E + P ++L+ G+
Sbjct: 379 DEFQIKPNFGHQW-CMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGN 437
Query: 312 LDQGRWI-HSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIG 370
G I S +E + + L+++Y GR + V E +K R++
Sbjct: 438 PTLGESIAKSLIETDPLNYKYY--HLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGC-- 493
Query: 371 GLA-----IHGR---AEDAMKLFTKMNGEK 392
GL +HG ++A K+FT+ + EK
Sbjct: 494 GLVDLKEIVHGLRLGCKEAEKVFTETSLEK 523
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 276 bits (707), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 168/577 (29%), Positives = 279/577 (48%), Gaps = 45/577 (7%)
Query: 31 TVLDILNKKCFHS--LQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVF 88
+VL ++ K C S + + + HA +KT+ +V +LL Y + +VF
Sbjct: 109 SVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMY--KRVGKIDKSCRVF 166
Query: 89 DCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVK 148
+P N + G + G + ++ + +M + +T+ KACA VK
Sbjct: 167 SEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVK 226
Query: 149 EGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDG 208
G H V+ +G + + ++ MY G ++ + + ++ DV+ W ++I
Sbjct: 227 YGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFEN--MSERDVVSWTSLIVA 284
Query: 209 YLKCGEVEAANEVFVNMPDKNVGS-------------------W---------------- 233
Y + G+ A E F+ M + V W
Sbjct: 285 YKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDS 344
Query: 234 ----NAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQR 289
N+M+ + CG + +A LF M RD ISWS II GY + +E + F M++
Sbjct: 345 LSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQ 404
Query: 290 EKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDM 349
KP+ L S+L+V N+ ++ GR +H+ ++ ++ + ++LI+MY KCG +
Sbjct: 405 SGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKE 464
Query: 350 AWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAH 409
A +F + ++ + AMI G A HG++++A+ LF K +P+ VTF+ VL AC H
Sbjct: 465 ASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTH 524
Query: 410 AGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWG 469
+G ++ G FN M+ Y + P EH+GC+VDLL RAG + +AEK I M K + VW
Sbjct: 525 SGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWT 584
Query: 470 ALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERG 529
LL AC+ G++E G R +L+++P + L+NIY+ G ++ A VRK MK +G
Sbjct: 585 TLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKG 644
Query: 530 IETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLE 566
+ PG S + + V F GD HPQ ++IY +LE
Sbjct: 645 VIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILE 681
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 105/523 (20%), Positives = 210/523 (40%), Gaps = 82/523 (15%)
Query: 77 NFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNS--RPNKFTY 134
N N A +VFD +P ++ +K + +A+ + M V++ P+
Sbjct: 52 NAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVL 111
Query: 135 PTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGK 194
+ KAC + ++ G HA+ VK L V++ S+ + MY G ++ ++ E
Sbjct: 112 SVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSE--M 169
Query: 195 TQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGS---------------------- 232
+ + W A+I G + G + F M S
Sbjct: 170 PFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGK 229
Query: 233 -----------------WNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQR 275
N++ + CG +++ LF+ M ERD +SW+++I Y +
Sbjct: 230 AIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIG 289
Query: 276 CFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGT 335
+A+E F +M+ ++ P+ SM + CA++ L G +H V + +
Sbjct: 290 QEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSN 349
Query: 336 ALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKP 395
+++ MY CG L A +F+ M+ R++ +W+ +IGG G E+ K F+ M KP
Sbjct: 350 SMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKP 409
Query: 396 NGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEA--- 452
+L+ + ++E G + +++ + +E ++++ + G ++EA
Sbjct: 410 TDFALASLLSVSGNMAVIEGGRQV-HALALCFGLEQNSTVRSSLINMYSKCGSIKEASMI 468
Query: 453 -----------------------------EKFIESMPV--KPNVAVWGALLNACRIHGNV 481
+ F +S+ V +P+ + ++L AC G +
Sbjct: 469 FGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQL 528
Query: 482 ELGERVGWIL---LDMEPRNSGRYALLSNIYAKAGRWDDVARV 521
+LG ++ +M P Y + ++ +AGR D ++
Sbjct: 529 DLGFHYFNMMQETYNMRPAKE-HYGCMVDLLCRAGRLSDAEKM 570
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 35/289 (12%)
Query: 234 NAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQ--REK 291
N+ + L G + AR +FD+M D +SW++II Y+ EAL +F M+
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 292 IKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAW 351
+ P +L +L C ++ G +H++ + S+ +G++L+DMY + G++D +
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 352 EVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACA--- 408
VF +M R TW A+I GL GR ++ + F++M+ + + TF L ACA
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLR 223
Query: 409 --------HAGMVERG----LGLFNSMKRVYEIEPEMEHFGCVV------DLLGRAGL-- 448
H ++ RG L + NS+ +Y EM+ C+ D++ L
Sbjct: 224 QVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIV 283
Query: 449 --------VEEAEKFIE--SMPVKPNVAVWGALLNACRIHGNVELGERV 487
V+ E FI+ + V PN + ++ +AC + GE++
Sbjct: 284 AYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQL 332
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 162/532 (30%), Positives = 269/532 (50%), Gaps = 51/532 (9%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVF---DCIPRPNVFVCNIYLK 104
Q HA + K+ + D V+ L+ Y+ + L+ +VF D I R N+ N+ +
Sbjct: 371 SQVHAWVFKSGFYLDSSVAAALISMYSKSG--DIDLSEQVFEDLDDIQRQNIV--NVMIT 426
Query: 105 GSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTG 164
++ +P KAI + +M+ R ++F+ +L +V + G Q H + +K GL
Sbjct: 427 SFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL---SVLDCLNLGKQVHGYTLKSGLVL 483
Query: 165 DVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVN 224
D+ + S+ +Y+ G E+ K+ G D CW +MI G+ + G + A +F
Sbjct: 484 DLTVGSSLFTLYSKCGSLEESYKLFQ--GIPFKDNACWASMISGFNEYGYLREAIGLFSE 541
Query: 225 M---------------------------------------PDKNVGSWNAMISGLARCGM 245
M DK + +A+++ ++CG
Sbjct: 542 MLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGS 601
Query: 246 IENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTV 305
++ AR ++D + E D +S S++I GY + ++ +F M + S+L
Sbjct: 602 LKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKA 661
Query: 306 CANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTW 365
A G +H+++ + + + +G++L+ MY K G +D + F ++ ++ W
Sbjct: 662 AALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAW 721
Query: 366 NAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKR 425
A+I A HG+A +A++++ M + KP+ VTFVGVL+AC+H G+VE NSM +
Sbjct: 722 TALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVK 781
Query: 426 VYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGE 485
Y IEPE H+ C+VD LGR+G + EAE FI +M +KP+ VWG LL AC+IHG VELG+
Sbjct: 782 DYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGK 841
Query: 486 RVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSS 537
+++EP ++G Y LSNI A+ G WD+V RKLMK G++ PG S
Sbjct: 842 VAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWS 893
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 131/580 (22%), Positives = 256/580 (44%), Gaps = 72/580 (12%)
Query: 49 QAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIE 108
QAH + F D F++ +LL Y+N + A K+FD IP+P+V CNI + G +
Sbjct: 71 QAHLLRRYLLPF-DVFLTKSLLSWYSNSG--SMADAAKLFDTIPQPDVVSCNIMISGYKQ 127
Query: 109 NGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGS--VKEGVQFHAFVVKQGLTGDV 166
+ +++ + KM L N+ +Y ++ AC+ + E V H +K G
Sbjct: 128 HRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCH--TIKMGYFFYE 185
Query: 167 HIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM- 225
++SA I +++ F +A K+ +S +V CWN +I G L+ A ++F M
Sbjct: 186 VVESALIDVFSKNLRFEDAYKVFRDS--LSANVYCWNTIIAGALRNQNYGAVFDLFHEMC 243
Query: 226 -----PD--------------------------------KNVGSWNAMISGLARCGMIEN 248
PD ++V A++ A+CG +
Sbjct: 244 VGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAE 303
Query: 249 ARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCAN 308
A +F + +SW+ ++ GY K ALE+F +M+ ++ + + S+++ C
Sbjct: 304 AMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGR 363
Query: 309 VGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKM-KVREVSTWNA 367
+ + +H++V ++ +D+ + ALI MY K G +D++ +VFE + ++ + N
Sbjct: 364 PSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNV 423
Query: 368 MIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNA--CAHAGMVERGLGLFNSMKR 425
MI + + A++LFT+M E + + + +L+ C + G G L + +
Sbjct: 424 MITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGL-- 481
Query: 426 VYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGE 485
V ++ F L + G +EE+ K + +P K N A W ++++ +G L E
Sbjct: 482 VLDLTVGSSLF----TLYSKCGSLEESYKLFQGIPFKDN-ACWASMISGFNEYG--YLRE 534
Query: 486 RVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMK-------ERGIETVPGSSM 538
+G ++ S + L+ + + R +++ ++G++ GS++
Sbjct: 535 AIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDL--GSAL 592
Query: 539 MDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYS 578
++M K K+ + ++ E L+ + I GYS
Sbjct: 593 VNMYSKCGSLKLARQVYDRLPE----LDPVSCSSLISGYS 628
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 130/568 (22%), Positives = 233/568 (41%), Gaps = 123/568 (21%)
Query: 55 LKTAHFHDHFVSGTLLKCYA-NPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPH 113
+K +F V L+ ++ N F + A KVF NV+ N + G++ N
Sbjct: 177 IKMGYFFYEVVESALIDVFSKNLRFED---AYKVFRDSLSANVYCWNTIIAGALRNQNYG 233
Query: 114 KAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGI 173
+H+M V +P+ +TY ++ ACA ++ G A V+K G
Sbjct: 234 AVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG------------ 281
Query: 174 QMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSW 233
DV A++D Y KCG + A EVF +P+ +V SW
Sbjct: 282 ----------------------AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSW 319
Query: 234 NAMISGLARCGMIENARTLFDEM-------------------------GERDEI-SW--- 264
M+SG + +A +F EM E ++ +W
Sbjct: 320 TVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFK 379
Query: 265 ----------SAIIDGYIKQRCFKEALEVFHQM---QREKI------------KPSR--H 297
+A+I Y K + +VF + QR+ I KP +
Sbjct: 380 SGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIR 439
Query: 298 LLPSML---------TVCANVGSLD---QGRWIHSFVERNSIQVDAVLGTALIDMYVKCG 345
L ML +VC+ + LD G+ +H + ++ + +D +G++L +Y KCG
Sbjct: 440 LFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCG 499
Query: 346 RLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLN 405
L+ ++++F+ + ++ + W +MI G +G +A+ LF++M + P+ T VL
Sbjct: 500 SLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLT 559
Query: 406 ACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNV 465
C+ + RG + R I+ M+ +V++ + G ++ A + + +P V
Sbjct: 560 VCSSHPSLPRGKEIHGYTLRA-GIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPV 618
Query: 466 AVWGALLNACRIHGNVELGERVGWILLDMEPRNSG----RYALLSNIYAKAGRWDDV--- 518
+ +L++ HG ++ G LL + SG +A +S+I A D+
Sbjct: 619 SC-SSLISGYSQHGLIQDG-----FLLFRDMVMSGFTMDSFA-ISSILKAAALSDESSLG 671
Query: 519 ARVRKLMKERGIETVP--GSSMMDMGGK 544
A+V + + G+ T P GSS++ M K
Sbjct: 672 AQVHAYITKIGLCTEPSVGSSLLTMYSK 699
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 145/341 (42%), Gaps = 26/341 (7%)
Query: 43 SLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIY 102
SL K+ H L+ + L+ Y+ + LA +V+D +P + C+
Sbjct: 566 SLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCG--SLKLARQVYDRLPELDPVSCSSL 623
Query: 103 LKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGL 162
+ G ++G + M++ + F ++ KA A++ G Q HA++ K GL
Sbjct: 624 ISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGL 683
Query: 163 TGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVF 222
+ + S+ + MY+ FG + K S D+I W A+I Y + G+ A +V+
Sbjct: 684 CTEPSVGSSLLTMYSKFGSIDDCCKAF--SQINGPDLIAWTALIASYAQHGKANEALQVY 741
Query: 223 VNMPDKNVG----SWNAMISGLARCGMIENARTLFDEMG-----ERDEISWSAIIDGYIK 273
M +K ++ ++S + G++E + + M E + + ++D +
Sbjct: 742 NLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGR 801
Query: 274 QRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQV---D 330
+EA + M IKP + ++L C G ++ G+ + +I++ D
Sbjct: 802 SGRLREAESFINNMH---IKPDALVWGTLLAACKIHGEVELGK----VAAKKAIELEPSD 854
Query: 331 AVLGTALIDMYVKCGRLDMAWEVFEKMK---VREVSTWNAM 368
A +L ++ + G D E + MK V++ W+++
Sbjct: 855 AGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 154/512 (30%), Positives = 268/512 (52%), Gaps = 42/512 (8%)
Query: 84 ATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAV 143
A +FD + + ++ N + G G + + ++M RP++ T+
Sbjct: 198 AKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGT 257
Query: 144 TGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWN 203
++ G H +VK G D+H+K+A I MY G + ++L+ DV+CW
Sbjct: 258 MCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLET--IPNKDVVCWT 315
Query: 204 AMIDGYLKCGEVEAANEVFVNMPDK-----------------NVGSW------------- 233
MI G ++ G E A VF M +GS+
Sbjct: 316 VMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRH 375
Query: 234 ---------NAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVF 284
N++I+ A+CG ++ + +F+ M ERD +SW+AII GY + +AL +F
Sbjct: 376 GYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLF 435
Query: 285 HQMQREKIKP-SRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVK 343
+M+ + ++ + S+L C++ G+L G+ IH V R+ I+ +++ TAL+DMY K
Sbjct: 436 EEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSK 495
Query: 344 CGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGV 403
CG L+ A F+ + ++V +W +I G HG+ + A++++++ +PN V F+ V
Sbjct: 496 CGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAV 555
Query: 404 LNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKP 463
L++C+H GMV++GL +F+SM R + +EP EH CVVDLL RA +E+A KF + +P
Sbjct: 556 LSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRP 615
Query: 464 NVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRK 523
++ V G +L+ACR +G E+ + + +++++P ++G Y L + +A RWDDV+
Sbjct: 616 SIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWN 675
Query: 524 LMKERGIETVPGSSMMDMGGKVHEFKMGDSSH 555
M+ G++ +PG S ++M GK F M +SH
Sbjct: 676 QMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSH 707
Score = 172 bits (435), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 190/403 (47%), Gaps = 40/403 (9%)
Query: 108 ENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVH 167
+G+ + +S + M+ P+ FT+P+L KACA + G+ H V+ G + D +
Sbjct: 23 SHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFY 82
Query: 168 IKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMP- 226
I S+ + +YA FGL ARK+ +E + DV+ W AMI Y + G V A + M
Sbjct: 83 ISSSLVNLYAKFGLLAHARKVFEE--MRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRF 140
Query: 227 -----------------------------------DKNVGSWNAMISGLARCGMIENART 251
D ++ N+M++ +C + +A+
Sbjct: 141 QGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKD 200
Query: 252 LFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGS 311
LFD+M +RD +SW+ +I GY E L++ ++M+ + ++P + + L+V +
Sbjct: 201 LFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCD 260
Query: 312 LDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGG 371
L+ GR +H + + VD L TALI MY+KCG+ + ++ V E + ++V W MI G
Sbjct: 261 LEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISG 320
Query: 372 LAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEP 431
L GRAE A+ +F++M + V+ +CA G + G + + R +
Sbjct: 321 LMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLR-HGYTL 379
Query: 432 EMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNA 474
+ ++ + + G ++++ E M + V+ W A+++
Sbjct: 380 DTPALNSLITMYAKCGHLDKSLVIFERMNERDLVS-WNAIISG 421
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/354 (20%), Positives = 149/354 (42%), Gaps = 45/354 (12%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSI 107
+ H I+KT D + L+ Y + +V + IP +V + + G +
Sbjct: 265 RMLHCQIVKTGFDVDMHLKTALITMYLKCGKEE--ASYRVLETIPNKDVVCWTVMISGLM 322
Query: 108 ENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVH 167
G KA+ + +M+ S + ++ +CA GS G H +V++ G T D
Sbjct: 323 RLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTP 382
Query: 168 IKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPD 227
++ I MYA G ++ + + + D++ WNA+I GY + ++ A +F M
Sbjct: 383 ALNSLITMYAKCGHLDKSLVIFER--MNERDLVSWNAIISGYAQNVDLCKALLLFEEMKF 440
Query: 228 KNVGSWN----------------------------------------AMISGLARCGMIE 247
K V + A++ ++CG +E
Sbjct: 441 KTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLE 500
Query: 248 NARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCA 307
A+ FD + +D +SW +I GY ALE++ + ++P+ + ++L+ C+
Sbjct: 501 AAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCS 560
Query: 308 NVGSLDQGRWIHSFVERN-SIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR 360
+ G + QG I S + R+ ++ + ++D+ + R++ A++ +++ R
Sbjct: 561 HNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTR 614
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 132/303 (43%), Gaps = 43/303 (14%)
Query: 278 KEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTAL 337
K+ L F M K+ P PS+L CA++ L G IH V N D + ++L
Sbjct: 28 KQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSL 87
Query: 338 IDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNG 397
+++Y K G L A +VFE+M+ R+V W AMIG + G +A L +M + KP
Sbjct: 88 VNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGP 147
Query: 398 VTFVGVLNA--------CAHAGMVERG----LGLFNSMKRVY----------EIEPEMEH 435
VT + +L+ C H V G + + NSM +Y ++ +ME
Sbjct: 148 VTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQ 207
Query: 436 -----FGCVVDLLGRAGLVEEAEKFIESM---PVKPNVAVWGALLNACRIHGNVELGERV 487
+ ++ G + E K + M ++P+ +GA L+ ++E+G +
Sbjct: 208 RDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRML 267
Query: 488 GWIL------LDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIE--TVPGSSMM 539
+ +DM + + L +Y K G+ + RV + + + + TV S +M
Sbjct: 268 HCQIVKTGFDVDMHLKTA-----LITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLM 322
Query: 540 DMG 542
+G
Sbjct: 323 RLG 325
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 116/266 (43%), Gaps = 17/266 (6%)
Query: 51 HAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENG 110
H +L+ + D +L+ YA + +L +F+ + ++ N + G +N
Sbjct: 369 HGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLV--IFERMNERDLVSWNAIISGYAQNV 426
Query: 111 EPHKAISCYHKMMVLN-SRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIK 169
+ KA+ + +M + + FT +L +AC+ G++ G H V++ + +
Sbjct: 427 DLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVD 486
Query: 170 SAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMP--- 226
+A + MY+ G A++ D + DV+ W +I GY G+ + A E++
Sbjct: 487 TALVDMYSKCGYLEAAQRCFDS--ISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSG 544
Query: 227 -DKNVGSWNAMISGLARCGMIENARTLFDEM-----GERDEISWSAIIDGYIKQRCFKEA 280
+ N + A++S + GM++ +F M E + + ++D + + ++A
Sbjct: 545 MEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDA 604
Query: 281 LEVFHQMQREKIKPSRHLLPSMLTVC 306
+ + + +PS +L +L C
Sbjct: 605 FKFY---KENFTRPSIDVLGIILDAC 627
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 276 bits (705), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 128/306 (41%), Positives = 197/306 (64%)
Query: 235 AMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKP 294
A++ A CG + AR+LF+ + E D +W+ ++ Y EV R +++P
Sbjct: 155 ALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRP 214
Query: 295 SRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVF 354
+ L +++ CAN+G +G W H +V +N++ ++ +GT+LID+Y KCG L A +VF
Sbjct: 215 NELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVF 274
Query: 355 EKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVE 414
++M R+VS +NAMI GLA+HG ++ ++L+ + + P+ TFV ++AC+H+G+V+
Sbjct: 275 DEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVD 334
Query: 415 RGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNA 474
GL +FNSMK VY IEP++EH+GC+VDLLGR+G +EEAE+ I+ MPVKPN +W + L +
Sbjct: 335 EGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGS 394
Query: 475 CRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVP 534
+ HG+ E GE LL +E NSG Y LLSNIYA RW DV + R+LMK+ + P
Sbjct: 395 SQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSP 454
Query: 535 GSSMMD 540
G S ++
Sbjct: 455 GISTLN 460
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 178/401 (44%), Gaps = 59/401 (14%)
Query: 36 LNKKCFHSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPN 95
L KC SLQ+LKQ HA I+ H + LL + + A + IP P+
Sbjct: 15 LISKC-KSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVCL---SYALSILRQIPNPS 70
Query: 96 VFVCNIYLKGSIEN---GEPHKAISCYHKMMVLNS---RPNKFTYPTLFKACAVTGSV-K 148
VF+ N + + N + H A S Y +++ S RPN+FTYP+LFKA +
Sbjct: 71 VFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHR 130
Query: 149 EGVQFHAFVVK--QGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMI 206
G HA V+K + + D +++A + YA+ G REAR + + + D+ WN ++
Sbjct: 131 HGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFER--IREPDLATWNTLL 188
Query: 207 DGYLKCGEVEAANEVFV----------------------NMPDKNVGSW----------- 233
Y E+++ EV + N+ + G W
Sbjct: 189 AAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLT 248
Query: 234 ------NAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQM 287
++I ++CG + AR +FDEM +RD ++A+I G +E +E++ +
Sbjct: 249 LNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSL 308
Query: 288 QREKIKPSRHLLPSMLTVCANVGSLDQGRWI-HSFVERNSIQVDAVLGTALIDMYVKCGR 346
+ + P ++ C++ G +D+G I +S I+ L+D+ + GR
Sbjct: 309 ISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGR 368
Query: 347 LDMAWEVFEKMKVREVST-WNAMIGGLAIHG---RAEDAMK 383
L+ A E +KM V+ +T W + +G HG R E A+K
Sbjct: 369 LEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALK 409
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 292 IKPSRHLLPSMLTVCANVGSLDQ-GRWIHSFVER--NSIQVDAVLGTALIDMYVKCGRLD 348
++P+ PS+ + GR +H+ V + + D + AL+ Y CG+L
Sbjct: 108 VRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLR 167
Query: 349 MAWEVFEKMKVREVSTWNAMIGGLAIH---GRAEDAMKLFTKMNGEKRKPNGVTFVGVLN 405
A +FE+++ +++TWN ++ A E+ + LF +M + +PN ++ V ++
Sbjct: 168 EARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRM---QVRPNELSLVALIK 224
Query: 406 ACAHAGMVERGLGLFNSMKRVYEIEPEM---EHFGC-VVDLLGRAGLVEEAEKFIESMPV 461
+CA+ G RG+ VY ++ + + G ++DL + G + A K + M
Sbjct: 225 SCANLGEFVRGV-----WAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQ 279
Query: 462 KPNVAVWGALLNACRIHG 479
+ +V+ + A++ +HG
Sbjct: 280 R-DVSCYNAMIRGLAVHG 296
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 169/562 (30%), Positives = 274/562 (48%), Gaps = 48/562 (8%)
Query: 45 QHLKQAHAIILKTAHF-HDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYL 103
+H+ Q HA ++ T + + +S L+ + + A KVFD +P+ V V N +
Sbjct: 31 RHITQIHAFVISTGNLLNGSSISRDLIA--SCGRIGEISYARKVFDELPQRGVSVYNSMI 88
Query: 104 KGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLT 163
P + + Y +M+ +P+ T+ KAC +++G V G
Sbjct: 89 VVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYK 148
Query: 164 GDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFV 223
DV + S+ + +Y G EA + + K DVICW M+ G+ + G+ A E +
Sbjct: 149 NDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKR--DVICWTTMVTGFAQAGKSLKAVEFYR 206
Query: 224 NMPDKNVGSWNAMISGL---------------------------------------ARCG 244
M ++ G ++ GL A+ G
Sbjct: 207 EMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVG 266
Query: 245 MIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLT 304
IE A +F M + +SW ++I G+ + +A E +MQ +P L +L
Sbjct: 267 FIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLV 326
Query: 305 VCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVST 364
C+ VGSL GR +H ++ + + +D V TAL+DMY KCG L + E+FE + +++
Sbjct: 327 ACSQVGSLKTGRLVHCYILKRHV-LDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVC 385
Query: 365 WNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMK 424
WN MI IHG ++ + LF KM +P+ TF +L+A +H+G+VE+G F+ M
Sbjct: 386 WNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMI 445
Query: 425 RVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELG 484
Y+I+P +H+ C++DLL RAG VEEA I S + + +W ALL+ C H N+ +G
Sbjct: 446 NKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVG 505
Query: 485 ERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGK 544
+ +L + P + G L+SN +A A +W +VA+VRKLM+ +E VPG S +++ G+
Sbjct: 506 DIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGE 565
Query: 545 VHEFKMGDSSHPQMKEIYLMLE 566
+ F M D SH E Y ML+
Sbjct: 566 LRTFLMEDLSH---HEHYHMLQ 584
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 169/571 (29%), Positives = 291/571 (50%), Gaps = 51/571 (8%)
Query: 48 KQAHAIILKTA-HFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGS 106
K+ HA +LK++ H + +V L+ Y A ++ + +V N +KG
Sbjct: 304 KEIHASVLKSSTHSSELYVCNALIAMYTR--CGKMPQAERILRQMNNADVVTWNSLIKGY 361
Query: 107 IENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDV 166
++N +A+ + M+ + ++ + ++ A ++ G++ HA+V+K G ++
Sbjct: 362 VQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNL 421
Query: 167 HIKSAGIQMYASFGLF----REARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVF 222
+ + I MY+ L R +M D+ D+I W +I GY + A E+F
Sbjct: 422 QVGNTLIDMYSKCNLTCYMGRAFLRMHDK------DLISWTTVIAGYAQNDCHVEALELF 475
Query: 223 VNMPDKN-------VGS-------------------------------WNAMISGLARCG 244
++ K +GS N ++ +C
Sbjct: 476 RDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCR 535
Query: 245 MIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLT 304
+ A +F+ + +D +SW+++I EA+E+F +M + L +L+
Sbjct: 536 NMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILS 595
Query: 305 VCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVST 364
A++ +L++GR IH ++ R ++ + A++DMY CG L A VF++++ + +
Sbjct: 596 AAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQ 655
Query: 365 WNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMK 424
+ +MI +HG + A++LF KM E P+ ++F+ +L AC+HAG+++ G G M+
Sbjct: 656 YTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIME 715
Query: 425 RVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELG 484
YE+EP EH+ C+VD+LGRA V EA +F++ M +P VW ALL ACR H E+G
Sbjct: 716 HEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIG 775
Query: 485 ERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGK 544
E LL++EP+N G L+SN++A+ GRW+DV +VR MK G+E PG S ++M GK
Sbjct: 776 EIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGK 835
Query: 545 VHEFKMGDSSHPQMKEIYLMLEKMMDKLQIE 575
VH+F D SHP+ KEIY L ++ KL+ E
Sbjct: 836 VHKFTARDKSHPESKEIYEKLSEVTRKLERE 866
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 126/530 (23%), Positives = 228/530 (43%), Gaps = 71/530 (13%)
Query: 11 GLKPIELSSDQAPSSKLSQKTVLDILNKKCFHSLQHLKQAHAIILKT-AHFHDHFVSGTL 69
+ +++S + +P + VL++ K+ ++ +Q H+ I KT F F++G L
Sbjct: 67 AFQRLDVSENNSPVEAFAY--VLELCGKR--RAVSQGRQLHSRIFKTFPSFELDFLAGKL 122
Query: 70 LKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRP 129
+ Y + A KVFD +P F N + + NGEP A++ Y M V
Sbjct: 123 VFMYGK--CGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPL 180
Query: 130 NKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKML 189
++P L KACA ++ G + H+ +VK G I +A + MYA AR++
Sbjct: 181 GLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLF 240
Query: 190 DESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM----PDKNVGS------------- 232
D + + D + WN+++ Y G+ E+F M P N +
Sbjct: 241 D-GFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSY 299
Query: 233 -----------------------WNAMISGLARCGMIENARTLFDEMGERDEISWSAIID 269
NA+I+ RCG + A + +M D ++W+++I
Sbjct: 300 AKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIK 359
Query: 270 GYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQV 329
GY++ +KEALE F M K + S++ + +L G +H++V ++
Sbjct: 360 GYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDS 419
Query: 330 DAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMN 389
+ +G LIDMY KC F +M +++ +W +I G A + +A++LF +
Sbjct: 420 NLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVA 479
Query: 390 GEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGC--------VVD 441
++ + + + G + R + SM V EI + G +VD
Sbjct: 480 KKRMEIDEMIL----------GSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVD 529
Query: 442 LLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGN----VELGERV 487
+ G+ + A + ES+ K +V W +++++ ++GN VEL R+
Sbjct: 530 VYGKCRNMGYATRVFESIKGK-DVVSWTSMISSSALNGNESEAVELFRRM 578
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 7/211 (3%)
Query: 273 KQRCFKEAL-EVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERN--SIQV 329
K CF L E F ++ + +L +C ++ QGR +HS + + S ++
Sbjct: 56 KLACFDGVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFEL 115
Query: 330 DAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMN 389
D + G L+ MY KCG LD A +VF++M R WN MIG +G A+ L+ M
Sbjct: 116 DFLAGK-LVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMR 174
Query: 390 GEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRV-YEIEPEMEHFGCVVDLLGRAGL 448
E +F +L ACA + G L + + ++ Y + +V + +
Sbjct: 175 VEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFI--VNALVSMYAKNDD 232
Query: 449 VEEAEKFIESMPVKPNVAVWGALLNACRIHG 479
+ A + + K + +W ++L++ G
Sbjct: 233 LSAARRLFDGFQEKGDAVLWNSILSSYSTSG 263
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 117/273 (42%), Gaps = 17/273 (6%)
Query: 43 SLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIY 102
S+ +K+ H IL+ D + L+ Y N AT+VF+ I +V
Sbjct: 502 SMLIVKEIHCHILRKGLL-DTVIQNELVDVYGK--CRNMGYATRVFESIKGKDVVSWTSM 558
Query: 103 LKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGL 162
+ S NG +A+ + +M+ + + A A ++ +G + H +++++G
Sbjct: 559 ISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGF 618
Query: 163 TGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVF 222
+ I A + MYA G + A+ + D + ++ + +MI+ Y G +AA E+F
Sbjct: 619 CLEGSIAVAVVDMYACCGDLQSAKAVFDRI--ERKGLLQYTSMINAYGMHGCGKAAVELF 676
Query: 223 VNMPDKNVG----SWNAMISGLARCGMIENARTLFDEMGERDEIS-----WSAIIDGYIK 273
M +NV S+ A++ + G+++ R M E+ + ++D +
Sbjct: 677 DKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGR 736
Query: 274 QRCFKEALEVFHQMQREKIKPSRHLLPSMLTVC 306
C EA E M+ E P+ + ++L C
Sbjct: 737 ANCVVEAFEFVKMMKTE---PTAEVWCALLAAC 766
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 272 bits (695), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 155/476 (32%), Positives = 254/476 (53%), Gaps = 67/476 (14%)
Query: 129 PNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKM 188
P+ ++ +AC ++ +G HA +K GL G V++++ + +Y+ G A+K
Sbjct: 102 PSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKA 161
Query: 189 LDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIEN 248
D+ + T + WN+++ GYL+ GE++ A VF +P+K+ SWN +IS A+ G + N
Sbjct: 162 FDDIAEKNT--VSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGN 219
Query: 249 A-------------------------------RTLFDEMGERDEISWSAIIDGYIKQ--- 274
A RT FD M +++ +SW +I GY K
Sbjct: 220 ACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDV 279
Query: 275 ----------------------RCF------KEALEVFHQM--QREKIKPSRHLLPSMLT 304
C+ K+AL++F QM + I+P L S+++
Sbjct: 280 QSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVS 339
Query: 305 VCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVST 364
+ +G+ G W+ S++ + I++D +L T+LID+Y+K G A+++F + ++ +
Sbjct: 340 ANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVS 399
Query: 365 WNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMK 424
++AMI G I+G A +A LFT M +K PN VTF G+L+A +H+G+V+ G FNSMK
Sbjct: 400 YSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMK 459
Query: 425 RVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELG 484
+ +EP +H+G +VD+LGRAG +EEA + I+SMP++PN VWGALL A +H NVE G
Sbjct: 460 D-HNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFG 518
Query: 485 ERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMD 540
E + +E +G + L+ IY+ GRWDD VR +KE+ + G S ++
Sbjct: 519 EIACSHCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 126/277 (45%), Gaps = 17/277 (6%)
Query: 260 DEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIH 319
D SW ++ + R FKE ++V+ M I PS H + S+L C + ++ G+ IH
Sbjct: 68 DSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIH 127
Query: 320 SFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAE 379
+ +N + + T L+ +Y + G +++A + F+ + + +WN+++ G G +
Sbjct: 128 AQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELD 187
Query: 380 DAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCV 439
+A ++F K+ + + V++ ++++ A G + LF++M P
Sbjct: 188 EARRVFDKI----PEKDAVSWNLIISSYAKKGDMGNACSLFSAM-------PLKSPASWN 236
Query: 440 VDLLGRAGLVEE--AEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPR 497
+ + G E A + ++MP K V+ W +++ G+V+ E + + M +
Sbjct: 237 ILIGGYVNCREMKLARTYFDAMPQKNGVS-WITMISGYTKLGDVQSAEELFRL---MSKK 292
Query: 498 NSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVP 534
+ Y + Y + G+ D ++ M ER P
Sbjct: 293 DKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQP 329
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 152/523 (29%), Positives = 272/523 (52%), Gaps = 35/523 (6%)
Query: 48 KQAHAIILKTAHF-HDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGS 106
K+ H+ IL+ ++ D V L+ YA F + + A F + ++ N L
Sbjct: 350 KEIHSYILRHSYLLEDTSVGNALISFYAR--FGDTSAAYWAFSLMSTKDIISWNAILDAF 407
Query: 107 IENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDV 166
++ + + ++ H ++ + T +L K C + + + H + VK GL D
Sbjct: 408 ADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDE 467
Query: 167 HIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMP 226
G NA++D Y KCG VE A+++F+ +
Sbjct: 468 EEPKLG------------------------------NALLDAYAKCGNVEYAHKIFLGLS 497
Query: 227 DK-NVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFH 285
++ + S+N+++SG G ++A+ LF EM D +WS ++ Y + C EA+ VF
Sbjct: 498 ERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFR 557
Query: 286 QMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCG 345
++Q ++P+ + ++L VCA + SL R H ++ R + D L L+D+Y KCG
Sbjct: 558 EIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLG-DIRLKGTLLDVYAKCG 616
Query: 346 RLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLN 405
L A+ VF+ R++ + AM+ G A+HGR ++A+ +++ M KP+ V +L
Sbjct: 617 SLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLT 676
Query: 406 ACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNV 465
AC HAG+++ GL +++S++ V+ ++P ME + C VDL+ R G +++A F+ MPV+PN
Sbjct: 677 ACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNA 736
Query: 466 AVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLM 525
+WG LL AC + ++LG V LL E ++G + L+SN+YA +W+ V +R LM
Sbjct: 737 NIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLM 796
Query: 526 KERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKM 568
K++ ++ G S +++ G+ + F GD SHP+ I+ ++ +
Sbjct: 797 KKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFDLVNAL 839
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 138/566 (24%), Positives = 239/566 (42%), Gaps = 84/566 (14%)
Query: 29 QKTVLDILNKKC--FHSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATK 86
+ LD++ K C L + H + K H VS ++L YA K
Sbjct: 21 HRVFLDVV-KACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCR--RMDDCQK 77
Query: 87 VFDCIPRPNVFVCNIYLKG-SIENG-EPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVT 144
+F + + V NI L G S+ G E + H +P+ T+ + C
Sbjct: 78 MFRQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMH--FADEPKPSSVTFAIVLPLCVRL 135
Query: 145 GSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFG-LFREARKMLDESGKTQTDVICWN 203
G G H++++K GL D + +A + MYA FG +F +A D G DV+ WN
Sbjct: 136 GDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFD--GIADKDVVSWN 193
Query: 204 AMIDGYLKCGEVEAANEVFVNMP---------------------DKNVG----------- 231
A+I G+ + + A F M DKN+
Sbjct: 194 AIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYV 253
Query: 232 ---SW--------NAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEA 280
SW N+++S R G IE A +LF MG +D +SW+ +I GY + +A
Sbjct: 254 VQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKA 313
Query: 281 LEVFHQM-QREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQV-DAVLGTALI 338
++FH + + + P + S+L VCA + L G+ IHS++ R+S + D +G ALI
Sbjct: 314 FQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALI 373
Query: 339 DMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGV 398
Y + G A+ F M +++ +WNA++ A + + L + E + V
Sbjct: 374 SFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSV 433
Query: 399 TFVGVLNACAHAGMVERGLGLFNSMKRVY-----------EIEPEMEHFGCVVDLLGRAG 447
T + +L C + +G+G +K V+ E EP++ + ++D + G
Sbjct: 434 TILSLLKFCINV----QGIG---KVKEVHGYSVKAGLLHDEEEPKLGN--ALLDAYAKCG 484
Query: 448 LVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELG--ERVGWILLDMEPRNSGRYALL 505
VE A K + + + + +LL+ G V G + + +M + ++L+
Sbjct: 485 NVEYAHKIFLGLSERRTLVSYNSLLS-----GYVNSGSHDDAQMLFTEMSTTDLTTWSLM 539
Query: 506 SNIYAKAGRWDDVARVRKLMKERGIE 531
IYA++ ++ V + ++ RG+
Sbjct: 540 VRIYAESCCPNEAIGVFREIQARGMR 565
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/372 (19%), Positives = 156/372 (41%), Gaps = 32/372 (8%)
Query: 46 HLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKG 105
+++ AH I L + +LL Y N ++ A +F + ++ ++ ++
Sbjct: 485 NVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDD--AQMLFTEMSTTDLTTWSLMVRI 542
Query: 106 SIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGD 165
E+ P++AI + ++ RPN T L CA S+ Q H ++++ GL GD
Sbjct: 543 YAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGL-GD 601
Query: 166 VHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM 225
+ +K + +YA G + A + + D++ + AM+ GY G + A ++ +M
Sbjct: 602 IRLKGTLLDVYAKCGSLKHAYSVFQSDAR--RDLVMFTAMVAGYAVHGRGKEALMIYSHM 659
Query: 226 PDKNVGS----WNAMISGLARCGMIENARTLFDEM----GERDEI-SWSAIIDGYIKQRC 276
+ N+ M++ G+I++ ++D + G + + ++ +D +
Sbjct: 660 TESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGR 719
Query: 277 FKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTA 336
+A QM ++P+ ++ ++L C +D G + + + + + D
Sbjct: 720 LDDAYSFVTQM---PVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQ--AESDDTGNHV 774
Query: 337 LI-DMYVKCGRLDMAWEVFEKMKVREVS-----TW-------NAMIGGLAIHGRAEDAMK 383
LI +MY + + E+ MK +E+ +W N + G H R +
Sbjct: 775 LISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFD 834
Query: 384 LFTKMNGEKRKP 395
L + + ++P
Sbjct: 835 LVNALYLQMKEP 846
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 150/447 (33%), Positives = 244/447 (54%), Gaps = 38/447 (8%)
Query: 98 VCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFV 157
V N ++ + GE +++ + M+ + +PN T+P+L KA + SV GV H
Sbjct: 53 VYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQA 112
Query: 158 VKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEA 217
+K+G D ++++ ++ Y G +RKM
Sbjct: 113 LKRGFLWDPFVQTSFVRFYGEVGDLESSRKM----------------------------- 143
Query: 218 ANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCF 277
F ++ + V + N+++ R G ++ A F M D +SW+ +I+G+ K+
Sbjct: 144 ----FDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLH 199
Query: 278 KEALEVFHQM---QREKIKPSRHLLPSMLTVCANV--GSLDQGRWIHSFVERNSIQVDAV 332
+AL VF +M +R I P+ S+L+ CAN G + G+ IH +V I +
Sbjct: 200 AKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTT 259
Query: 333 LGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEK 392
LGTAL+DMY K G L+MA +F++++ ++V WNA+I LA +GR + A+++F M
Sbjct: 260 LGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSY 319
Query: 393 RKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEA 452
PNG+T + +L ACA + +V+ G+ LF+S+ Y+I P EH+GCVVDL+GRAGL+ +A
Sbjct: 320 VHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDA 379
Query: 453 EKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKA 512
FI+S+P +P+ +V GALL AC+IH N ELG VG L+ ++P++ G+Y LS A
Sbjct: 380 ANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQYVALSTFNALD 439
Query: 513 GRWDDVARVRKLMKERGIETVPGSSMM 539
W + ++RK M E GI +P S++
Sbjct: 440 SNWSEAEKMRKAMIEAGIRKIPAYSVL 466
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 269 bits (687), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 171/568 (30%), Positives = 276/568 (48%), Gaps = 60/568 (10%)
Query: 19 SDQAPSSKLSQKTVLDILNKKCFHSLQHLKQAHAIILKTAHFHDHFVSGTLLKCY--ANP 76
S + P++ ++L NK S H Q HA ++K+ D V +LL Y P
Sbjct: 54 SSEIPATPKLYASLLQTCNK--VFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGP 111
Query: 77 NFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPT 136
+VFD + + G + E KA+ + +M+ N+FT +
Sbjct: 112 GMRE---TRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSS 168
Query: 137 LFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFRE---ARKMLDESG 193
KAC+ G V+ G FH V+ G + I S +Y G+ RE AR++ DE
Sbjct: 169 AVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLY---GVNREPVDARRVFDE-- 223
Query: 194 KTQTDVICWNAMIDGYLKCGEVEAANEVFVNM-------PD------------------- 227
+ DVICW A++ + K E A +F M PD
Sbjct: 224 MPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQ 283
Query: 228 --------------KNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIK 273
NV ++++ +CG + AR +F+ M +++ +SWSA++ GY +
Sbjct: 284 GKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQ 343
Query: 274 QRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVL 333
++A+E+F +M+ + + + ++L CA + ++ G+ IH R + ++
Sbjct: 344 NGEHEKAIEIFREMEEKDL----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIV 399
Query: 334 GTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKR 393
+ALID+Y K G +D A V+ KM +R + TWNAM+ LA +GR E+A+ F M +
Sbjct: 400 ESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGI 459
Query: 394 KPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAE 453
KP+ ++F+ +L AC H GMV+ G F M + Y I+P EH+ C++DLLGRAGL EEAE
Sbjct: 460 KPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAE 519
Query: 454 KFIESMPVKPNVAVWGALLNACRIHGNV-ELGERVGWILLDMEPRNSGRYALLSNIYAKA 512
+E + + ++WG LL C + + + ER+ ++++EP+ Y LLSN+Y
Sbjct: 520 NLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAI 579
Query: 513 GRWDDVARVRKLMKERGIETVPGSSMMD 540
GR D +RKLM RG+ G S +D
Sbjct: 580 GRHGDALNIRKLMVRRGVAKTVGQSWID 607
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 268 bits (686), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 161/523 (30%), Positives = 264/523 (50%), Gaps = 48/523 (9%)
Query: 62 DHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHK 121
D +V L+ YA +A KVFD +P+ ++ N + G + I +
Sbjct: 137 DMYVCTALVDFYAKCG--ELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLD 194
Query: 122 MMVLNS-RPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFG 180
M ++ PN T +F A G+++EG H + + G + D+ +K+ + +YA
Sbjct: 195 MRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSK 254
Query: 181 LFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM-PDKNVG-------- 231
AR++ D K + W+AMI GY++ ++ A EVF M + NV
Sbjct: 255 CIIYARRVFDLDFKKNE--VTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIG 312
Query: 232 --------------------------------SWNAMISGLARCGMIENARTLFDEMGER 259
N +IS A+ G + +A F E+G +
Sbjct: 313 LILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLK 372
Query: 260 DEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIH 319
D IS++++I G + +E+ +FH+M+ I+P L +LT C+++ +L G H
Sbjct: 373 DVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCH 432
Query: 320 SFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAE 379
+ + V+ + AL+DMY KCG+LD+A VF+ M R++ +WN M+ G IHG +
Sbjct: 433 GYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGK 492
Query: 380 DAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKR-VYEIEPEMEHFGC 438
+A+ LF M P+ VT + +L+AC+H+G+V+ G LFNSM R + + P ++H+ C
Sbjct: 493 EALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNC 552
Query: 439 VVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRN 498
+ DLL RAG ++EA F+ MP +P++ V G LL+AC + N ELG V + +
Sbjct: 553 MTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSL-GET 611
Query: 499 SGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDM 541
+ LLSN Y+ A RW+D AR+R + K+RG+ PG S +D+
Sbjct: 612 TESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 139/533 (26%), Positives = 235/533 (44%), Gaps = 92/533 (17%)
Query: 69 LLKCYANPNFNNFTLATKVFDCIPRP--NVFVCNIYLKGSIENGEPHKAISCYHKMMVLN 126
L + YA+ N LA VFD IP P N ++ ++ N KA+ Y+KM+
Sbjct: 41 LTRLYASCN--EVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSG 98
Query: 127 SRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREAR 186
RP K+TYP + KACA ++ +G H+ V D+++ +A + YA G A
Sbjct: 99 VRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAI 158
Query: 187 KMLDESGKTQTDVICWNAMIDGY-LKCGEVEAANEVFVNMP-----DKNVGSWNAMISGL 240
K+ DE K D++ WNAMI G+ L C + +F++M N+ + M L
Sbjct: 159 KVFDEMPK--RDMVAWNAMISGFSLHCCLTDVIG-LFLDMRRIDGLSPNLSTIVGMFPAL 215
Query: 241 ARCGMIEN-----------------------------------ARTLFDEMGERDEISWS 265
R G + AR +FD +++E++WS
Sbjct: 216 GRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWS 275
Query: 266 AIIDGYIKQRCFKEALEVFHQM----QREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSF 321
A+I GY++ KEA EVF QM + P + +L CA G L GR +H +
Sbjct: 276 AMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVA--IGLILMGCARFGDLSGGRCVHCY 333
Query: 322 VERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDA 381
+ +D + +I Y K G L A+ F ++ +++V ++N++I G ++ R E++
Sbjct: 334 AVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEES 393
Query: 382 MKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERG------------------------- 416
+LF +M +P+ T +GVL AC+H + G
Sbjct: 394 FRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDM 453
Query: 417 ---LGLFNSMKRVYEI--EPEMEHFGCVVDLLGRAGLVEEAEKFIESMP---VKPNVAVW 468
G + KRV++ + ++ + ++ G GL +EA SM V P+
Sbjct: 454 YTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTL 513
Query: 469 GALLNACRIHGNVELGERVGWIL----LDMEPRNSGRYALLSNIYAKAGRWDD 517
A+L+AC G V+ G+++ + ++ PR Y ++++ A+AG D+
Sbjct: 514 LAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRID-HYNCMTDLLARAGYLDE 565
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 117/277 (42%), Gaps = 19/277 (6%)
Query: 41 FHSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCN 100
F L + H +K D V T++ YA + + A + F I +V N
Sbjct: 321 FGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAK--YGSLCDAFRQFSEIGLKDVISYN 378
Query: 101 IYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQ 160
+ G + N P ++ +H+M RP+ T + AC+ ++ G H + V
Sbjct: 379 SLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVH 438
Query: 161 GLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANE 220
G + I +A + MY G A+++ D K D++ WN M+ G+ G + A
Sbjct: 439 GYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHK--RDIVSWNTMLFGFGIHGLGKEALS 496
Query: 221 VFVNMPDKNVG----SWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRC 276
+F +M + V + A++S + G+++ + LF+ M R + + ID Y C
Sbjct: 497 LFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSM-SRGDFNVIPRIDHY---NC 552
Query: 277 FKEAL-------EVFHQMQREKIKPSRHLLPSMLTVC 306
+ L E + + + +P +L ++L+ C
Sbjct: 553 MTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSAC 589
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 268 bits (686), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 143/424 (33%), Positives = 231/424 (54%), Gaps = 37/424 (8%)
Query: 43 SLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIY 102
+ LKQ H I+K +D + L+ + +F A+ VF+ + P+ F N+
Sbjct: 32 NFSQLKQIHTKIIKHNLTNDQLLVRQLIS--VSSSFGETQYASLVFNQLQSPSTFTWNLM 89
Query: 103 LKGSIENGEPHKAISCYHKMMVLN-SRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQG 161
++ N +P +A+ + MM+ + S+ +KFT+P + KAC + S++ G Q H +K G
Sbjct: 90 IRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAG 149
Query: 162 LTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEV 221
DV + N ++D Y KCG+ ++ +V
Sbjct: 150 FFNDVFFQ---------------------------------NTLMDLYFKCGKPDSGRKV 176
Query: 222 FVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEAL 281
F MP +++ SW M+ GL +++A +F++M R+ +SW+A+I Y+K R EA
Sbjct: 177 FDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAF 236
Query: 282 EVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMY 341
++F +MQ + +KP+ + ++L +GSL GRW+H + +N +D LGTALIDMY
Sbjct: 237 QLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMY 296
Query: 342 VKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKR-KPNGVTF 400
KCG L A +VF+ M+ + ++TWN+MI L +HG E+A+ LF +M E +P+ +TF
Sbjct: 297 SKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITF 356
Query: 401 VGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMP 460
VGVL+ACA+ G V+ GL F M +VY I P EH C++ LL +A VE+A +ESM
Sbjct: 357 VGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMD 416
Query: 461 VKPN 464
P+
Sbjct: 417 SDPD 420
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 268 bits (686), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 168/507 (33%), Positives = 251/507 (49%), Gaps = 74/507 (14%)
Query: 103 LKGSIENGEPHKAISCYHKMMVLNSRPNKFT--YPTLFKACA-VTGSVKEGVQFHAFVVK 159
+K I G P +A+ Y + R F P + +ACA V V G H+ +K
Sbjct: 18 IKNHISRGSPIQALVLYGG---IRRRGVYFPGWVPLILRACACVVPRVVLGKLLHSESIK 74
Query: 160 QGLTGDVHIKSAGIQMYASFGLFREARKMLDE-------------------------SGK 194
G+ DV + S+ I MY G ARK+ DE SG
Sbjct: 75 FGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGL 134
Query: 195 TQTDVIC-----WNAMIDGYLKCGEVEAANEVFVNMP----------------------- 226
+ +C W MI GY K E+E A E+F MP
Sbjct: 135 FEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKME 194
Query: 227 ----------DKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRC 276
+KN W+ M+SG R G + AR +F + RD + W+ +I GY +
Sbjct: 195 DARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGY 254
Query: 277 FKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTA 336
+A++ F MQ E +P + S+L+ CA G LD GR +HS + I+++ + A
Sbjct: 255 SDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNA 314
Query: 337 LIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPN 396
LIDMY KCG L+ A VFE + VR V+ N+MI LAIHG+ ++A+++F+ M KP+
Sbjct: 315 LIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPD 374
Query: 397 GVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFI 456
+TF+ VL AC H G + GL +F+ MK +++P ++HFGC++ LLGR+G ++EA + +
Sbjct: 375 EITFIAVLTACVHGGFLMEGLKIFSEMK-TQDVKPNVKHFGCLIHLLGRSGKLKEAYRLV 433
Query: 457 ESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLD----MEPRNSGRYALLSNIYAKA 512
+ M VKPN V GALL AC++H + E+ E+V I+ + A +SN+YA
Sbjct: 434 KEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENHLASISNLYAHT 493
Query: 513 GRWDDVARVRKLMKERGIETVPGSSMM 539
RW +R M++RG+E PG S +
Sbjct: 494 ERWQTAEALRVEMEKRGLEKSPGLSSL 520
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 132/309 (42%), Gaps = 43/309 (13%)
Query: 84 ATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAV 143
A K F+ IP N FV ++ + G G+ H+A + ++++ + + TL A
Sbjct: 196 ARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFA----RDLVIWNTLIAGYAQ 251
Query: 144 TGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLF---REARKMLDESGKTQTDVI 200
G + + + +G D S+ + A G RE +++ G + +
Sbjct: 252 NGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRG-IELNQF 310
Query: 201 CWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERD 260
NA+ID Y KCG++E A VF ++ ++V N+MIS LA G
Sbjct: 311 VSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGK--------------- 355
Query: 261 EISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHS 320
KEALE+F M+ +KP ++LT C + G L +G I S
Sbjct: 356 ----------------GKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFS 399
Query: 321 FVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVST-WNAMIGGLAIH---G 376
++ ++ + LI + + G+L A+ + ++M V+ T A++G +H
Sbjct: 400 EMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTE 459
Query: 377 RAEDAMKLF 385
AE MK+
Sbjct: 460 MAEQVMKII 468
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 151/322 (46%), Gaps = 16/322 (4%)
Query: 261 EISWSAIIDGYIKQRCFKEALEVFHQMQREKIK-PSRHLLPSMLTVCANV-GSLDQGRWI 318
E S +I +I + +AL ++ ++R + P +P +L CA V + G+ +
Sbjct: 11 EFHVSNLIKNHISRGSPIQALVLYGGIRRRGVYFPG--WVPLILRACACVVPRVVLGKLL 68
Query: 319 HSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRA 378
HS + + D ++G++LI MY KCG + A +VF++M R V+TWNAMIGG +G A
Sbjct: 69 HSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDA 128
Query: 379 EDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGC 438
A LF +++ + N VT++ ++ +E+ LF M +E++ ++ +
Sbjct: 129 VLASGLFEEISVCR---NTVTWIEMIKGYGKRIEIEKARELFERMP--FELK-NVKAWSV 182
Query: 439 VVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRN 498
++ + +E+A KF E +P K N VW +++ G+V + + + R+
Sbjct: 183 MLGVYVNNRKMEDARKFFEDIPEK-NAFVWSLMMSGYFRIGDVHEARAIFYRVF---ARD 238
Query: 499 SGRYALLSNIYAKAGRWDDVARVRKLMKERGIE--TVPGSSMMDMGGKVHEFKMGDSSHP 556
+ L YA+ G DD M+ G E V SS++ + +G H
Sbjct: 239 LVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHS 298
Query: 557 QMKEIYLMLEKMMDKLQIEGYS 578
+ + L + + I+ Y+
Sbjct: 299 LINHRGIELNQFVSNALIDMYA 320
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 268 bits (685), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 172/586 (29%), Positives = 281/586 (47%), Gaps = 60/586 (10%)
Query: 51 HAIILKTAHFHDHF----------VSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCN 100
HA I+K F + V +LL YA A K+FD +P +V N
Sbjct: 68 HASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAK--CGKLVDAIKLFDEMPMRDVISQN 125
Query: 101 IYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGV---QFHAFV 157
I G + N E +M+ F + TL +V + + + HA
Sbjct: 126 IVFYGFLRNRETESGFVLLKRML----GSGGFDHATLTIVLSVCDTPEFCLVTKMIHALA 181
Query: 158 VKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGY-------- 209
+ G ++ + + I Y G R + D G + +VI A+I G
Sbjct: 182 ILSGYDKEISVGNKLITSYFKCGCSVSGRGVFD--GMSHRNVITLTAVISGLIENELHED 239
Query: 210 -------LKCGEVEAANEVFVNMPDKNVGS-------------W-----------NAMIS 238
++ G V + +++ GS W +A++
Sbjct: 240 GLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMD 299
Query: 239 GLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHL 298
++CG IE+A T+F+ E DE+S + I+ G + +EA++ F +M + ++ ++
Sbjct: 300 MYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANV 359
Query: 299 LPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMK 358
+ ++L V SL G+ +HS V + + + LI+MY KCG L + VF +M
Sbjct: 360 VSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMP 419
Query: 359 VREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLG 418
R +WN+MI A HG A+KL+ +M + KP VTF+ +L+AC+H G++++G
Sbjct: 420 KRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRE 479
Query: 419 LFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIH 478
L N MK V+ IEP EH+ C++D+LGRAGL++EA+ FI+S+P+KP+ +W ALL AC H
Sbjct: 480 LLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFH 539
Query: 479 GNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSM 538
G+ E+GE L P +S + L++NIY+ G+W + A+ K MK G+ G S
Sbjct: 540 GDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISS 599
Query: 539 MDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMV 584
+++ K H F + D HPQ + IY +L + + EGY P+ +
Sbjct: 600 IEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVMVDEGYRPDKRFI 645
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 170/591 (28%), Positives = 293/591 (49%), Gaps = 66/591 (11%)
Query: 55 LKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHK 114
L + D FV + + YA + + +VFD N+ V N + ++N +
Sbjct: 243 LGDEYVKDLFVVSSAISMYAE--LGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVE 300
Query: 115 AISCYHKMMVLNSR---PNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSA 171
+I + + + S+ ++ TY A + V+ G QFH FV K + I ++
Sbjct: 301 SIELF--LEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNS 358
Query: 172 GIQMYA-------SFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCG----------- 213
+ MY+ SFG+F R + DV+ WN MI +++ G
Sbjct: 359 LMVMYSRCGSVHKSFGVFLSMR---------ERDVVSWNTMISAFVQNGLDDEGLMLVYE 409
Query: 214 -----------EVEAANEVFVNMPDKNVGSW----------------NAMISGLARCGMI 246
V A N+ +K +G + +I ++ G+I
Sbjct: 410 MQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLI 469
Query: 247 ENARTLFDEMG--ERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLT 304
++ LF+ G ERD+ +W+++I GY + ++ VF +M + I+P+ + S+L
Sbjct: 470 RISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILP 529
Query: 305 VCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVST 364
C+ +GS+D G+ +H F R + + + +AL+DMY K G + A ++F + K R T
Sbjct: 530 ACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVT 589
Query: 365 WNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMK 424
+ MI G HG E A+ LF M KP+ +TFV VL+AC+++G+++ GL +F M+
Sbjct: 590 YTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMR 649
Query: 425 RVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVA-VWGALLNACRIHGNVEL 483
VY I+P EH+ C+ D+LGR G V EA +F++ + + N+A +WG+LL +C++HG +EL
Sbjct: 650 EVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELEL 709
Query: 484 GERVGWIL--LDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDM 541
E V L D SG LLSN+YA+ +W V +VR+ M+E+G++ G S +++
Sbjct: 710 AETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEI 769
Query: 542 GGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEE 592
G V+ F D HP EIY +++ + ++ + + V+ +E +E
Sbjct: 770 AGYVNCFVSRDQEHPHSSEIYDVIDGLAKDMRGDSFLTTLPTVTPSLELDE 820
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 127/522 (24%), Positives = 230/522 (44%), Gaps = 93/522 (17%)
Query: 80 NFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPN--KFTYPTL 137
N LA ++FD IP+P + N + G I N PH+A+ Y +M N +TY +
Sbjct: 54 NPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSST 113
Query: 138 FKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYAS-------FGLFREARKMLD 190
KACA T ++K G H +++ + ++ + MY S F + RK+ D
Sbjct: 114 LKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFE-YDVVRKVFD 172
Query: 191 ESGKTQTDVICWNAMIDGYLKCG---------------EVEAANEVFVNM-PD------- 227
+ +V+ WN +I Y+K G EV+ + FVN+ P
Sbjct: 173 --NMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSI 230
Query: 228 ------------------KNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIID 269
K++ ++ IS A G IE++R +FD ER+ W+ +I
Sbjct: 231 KKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIG 290
Query: 270 GYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQ---GRWIHSFVERNS 326
Y++ C E++E+F + K S + + L + V +L Q GR H FV +N
Sbjct: 291 VYVQNDCLVESIELFLEAIGSKEIVSDEV--TYLLAASAVSALQQVELGRQFHGFVSKNF 348
Query: 327 IQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFT 386
++ V+ +L+ MY +CG + ++ VF M+ R+V +WN MI +G ++ + L
Sbjct: 349 RELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVY 408
Query: 387 KMNGEKRKPNGVTFVGVLNACA-----------HAGMVERGL----------------GL 419
+M + K + +T +L+A + HA ++ +G+ GL
Sbjct: 409 EMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGL 468
Query: 420 FNSMKRVYE----IEPEMEHFGCVVDLLGRAGLVEEAEKFIESM---PVKPNVAVWGALL 472
++++E E + + ++ + G E+ M ++PN ++L
Sbjct: 469 IRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASIL 528
Query: 473 NACRIHGNVELGERV-GWILLDMEPRNSGRYALLSNIYAKAG 513
AC G+V+LG+++ G+ + +N + L ++Y+KAG
Sbjct: 529 PACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAG 570
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 114/250 (45%), Gaps = 10/250 (4%)
Query: 232 SWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREK 291
S + +S + + G + AR LFD + + + W+ II G+I EAL + +M++
Sbjct: 41 SIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTA 100
Query: 292 --IKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKC----- 344
+ S L CA +L G+ +H + R V+ +L++MYV C
Sbjct: 101 PFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPD 160
Query: 345 -GRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGV 403
D+ +VF+ M+ + V WN +I GR +A + F M + KP+ V+FV V
Sbjct: 161 CFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNV 220
Query: 404 LNACAHAGMVERGLGLFNSMKRV-YEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVK 462
A + + +++ + M ++ E ++ + + G +E + + +S V+
Sbjct: 221 FPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSC-VE 279
Query: 463 PNVAVWGALL 472
N+ VW ++
Sbjct: 280 RNIEVWNTMI 289
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 265 bits (678), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 149/439 (33%), Positives = 238/439 (54%), Gaps = 46/439 (10%)
Query: 134 YPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESG 193
+ +L + C ++ GV+ H + L ++ I S +++YAS G A ++ D
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 194 KTQTDVICWNAMIDGYLKCGEVEAANEVFVNM------PDK-----------NVGS---- 232
K + WN++I GY + G+ E A ++ M PD+ +GS
Sbjct: 155 KRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIG 214
Query: 233 ------------------WNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQ 274
NA++ A+CG I AR +FD + +D +SW++++ GY+
Sbjct: 215 EAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHH 274
Query: 275 RCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLG 334
EAL++F M + I+P + + S+L A V S GR +H +V R ++ + +
Sbjct: 275 GLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVA 331
Query: 335 TALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRK 394
ALI +Y K G+L A +F++M R+ +WNA+I H + + +K F +M+ K
Sbjct: 332 NALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISA---HSKNSNGLKYFEQMHRANAK 388
Query: 395 PNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEK 454
P+G+TFV VL+ CA+ GMVE G LF+ M + Y I+P+MEH+ C+V+L GRAG++EEA
Sbjct: 389 PDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYS 448
Query: 455 FI-ESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAG 513
I + M ++ VWGALL AC +HGN ++GE L ++EP N + LL IY+KA
Sbjct: 449 MIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAK 508
Query: 514 RWDDVARVRKLMKERGIET 532
R +DV RVR++M +RG+ET
Sbjct: 509 RAEDVERVRQMMVDRGLET 527
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 122/501 (24%), Positives = 221/501 (44%), Gaps = 91/501 (18%)
Query: 3 TTATNFPSGLKPIELSSDQAPSSKLSQKTVLDILNKKCF--HSLQHLKQAHAIILKTAHF 60
T S + +E S+ + S L++ + L + C+ ++ H + H +I
Sbjct: 67 TQLEALDSVITDLETSAQKGIS--LTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLR 124
Query: 61 HDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNV--FVCNIYLKGSIENGEPHKAISC 118
++ +S L++ YA+ + +A +VFD + + + F N + G E G+ A++
Sbjct: 125 NNLGISSKLVRLYASCGYAE--VAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMAL 182
Query: 119 YHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYAS 178
Y +M +P++FT+P + KAC GSV+ G H +VK+G DV++ +A + MYA
Sbjct: 183 YFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAK 242
Query: 179 FGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM------PDK---- 228
G +AR + D D + WN+M+ GYL G + A ++F M PDK
Sbjct: 243 CGDIVKARNVFDMI--PHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAIS 300
Query: 229 -------------NVGSW-------------NAMISGLARCGMIENARTLFDEMGERDEI 262
+ W NA+I ++ G + A +FD+M ERD +
Sbjct: 301 SVLARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTV 360
Query: 263 SWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFV 322
SW+AII + K L+ F QM R KP S+L++CAN G ++ G + S +
Sbjct: 361 SWNAIISAHSKN---SNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLM 417
Query: 323 ERN-SIQVDAVLGTALIDMYVKCGRLDMAWE-VFEKMKVREVST-WNAMIGGLAIHGRAE 379
+ I ++++Y + G ++ A+ + ++M + T W A++ +HG +
Sbjct: 418 SKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTD 477
Query: 380 DAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEH-FGC 438
+G + A +R++E+EP+ EH F
Sbjct: 478 ---------------------IGEVAA-----------------QRLFELEPDNEHNFEL 499
Query: 439 VVDLLGRAGLVEEAEKFIESM 459
++ + +A E+ E+ + M
Sbjct: 500 LIRIYSKAKRAEDVERVRQMM 520
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 157/338 (46%), Gaps = 35/338 (10%)
Query: 229 NVGSWNAMISGLARCGMIENARTLFDEMGERDE--ISWSAIIDGYIKQRCFKEALEVFHQ 286
N+G + ++ A CG E A +FD M +RD +W+++I GY + +++A+ ++ Q
Sbjct: 126 NLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQ 185
Query: 287 MQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGR 346
M + +KP R P +L C +GS+ G IH + + D + AL+ MY KCG
Sbjct: 186 MAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGD 245
Query: 347 LDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNA 406
+ A VF+ + ++ +WN+M+ G HG +A+ +F M +P+ V VL
Sbjct: 246 IVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLAR 305
Query: 407 C--------AHAGMVERG----LGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLV----- 449
H ++ RG L + N++ +Y ++ + D + V
Sbjct: 306 VLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAI 365
Query: 450 -------EEAEKFIESM---PVKPNVAVWGALLNACRIHGNVELGERVGWIL---LDMEP 496
K+ E M KP+ + ++L+ C G VE GER+ ++ ++P
Sbjct: 366 ISAHSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDP 425
Query: 497 RNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVP 534
+ YA + N+Y +AG ++ + +++E G+E P
Sbjct: 426 KME-HYACMVNLYGRAGMMEEAYSM--IVQEMGLEAGP 460
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 151/446 (33%), Positives = 221/446 (49%), Gaps = 66/446 (14%)
Query: 94 PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQF 153
P F+ N ++ I + P AI Y M+ P++++ P + KA G +
Sbjct: 80 PIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKEL 139
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCG 213
H+ V+ G G D C + I Y K G
Sbjct: 140 HSVAVRLGFVG---------------------------------DEFCESGFITLYCKAG 166
Query: 214 EVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIK 273
E ENAR +FDE ER SW+AII G
Sbjct: 167 E-------------------------------FENARKVFDENPERKLGSWNAIIGGLNH 195
Query: 274 QRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFV--ERNSIQVDA 331
EA+E+F M+R ++P + S+ C +G L +H V + + D
Sbjct: 196 AGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDI 255
Query: 332 VLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGE 391
++ +LIDMY KCGR+D+A +FE+M+ R V +W++MI G A +G +A++ F +M
Sbjct: 256 MMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREF 315
Query: 392 KRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEE 451
+PN +TFVGVL+AC H G+VE G F MK +E+EP + H+GC+VDLL R G ++E
Sbjct: 316 GVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKE 375
Query: 452 AEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAK 511
A+K +E MP+KPNV VWG L+ C G+VE+ E V ++++EP N G Y +L+N+YA
Sbjct: 376 AKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYAL 435
Query: 512 AGRWDDVARVRKLMKERGIETVPGSS 537
G W DV RVRKLMK + + +P S
Sbjct: 436 RGMWKDVERVRKLMKTKKVAKIPAYS 461
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 20/217 (9%)
Query: 49 QAHAIIL--KTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGS 106
Q H +L KT D + +L+ Y LA+ +F+ + + NV + + G
Sbjct: 239 QLHKCVLQAKTEEKSDIMMLNSLIDMYGK--CGRMDLASHIFEEMRQRNVVSWSSMIVGY 296
Query: 107 IENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHA-----FVVKQG 161
NG +A+ C+ +M RPNK T+ + AC G V+EG + A F ++ G
Sbjct: 297 AANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPG 356
Query: 162 LTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEV 221
L+ I + + + G +EA+K+++E + +V+ W ++ G K G+VE A V
Sbjct: 357 LSHYGCI----VDLLSRDGQLKEAKKVVEEM-PMKPNVMVWGCLMGGCEKFGDVEMAEWV 411
Query: 222 ---FVNMPDKNVGSWNAMISGLARCGM---IENARTL 252
V + N G + + + A GM +E R L
Sbjct: 412 APYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKL 448
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 263 bits (671), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 150/445 (33%), Positives = 239/445 (53%), Gaps = 14/445 (3%)
Query: 84 ATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAV 143
A KVFD +P+ ++ C + + NG +++ + +M + + F P+L KA
Sbjct: 70 ARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRN 129
Query: 144 TGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWN 203
+ G H V+K D I S+ I MY+ FG ARK+ + G + D++ +N
Sbjct: 130 LLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLG--EQDLVVFN 187
Query: 204 AMIDGYLKCGEVEAANEVFVNM------PDKNVGSWNAMISGLARCGMIENARTLFDEMG 257
AMI GY + + A + +M PD V +WNA+ISG + E + + M
Sbjct: 188 AMISGYANNSQADEALNLVKDMKLLGIKPD--VITWNALISGFSHMRNEEKVSEILELMC 245
Query: 258 ----ERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLD 313
+ D +SW++II G + ++A + F QM + P+ + ++L C + +
Sbjct: 246 LDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMK 305
Query: 314 QGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLA 373
G+ IH + ++ + +AL+DMY KCG + A +F K + T+N+MI A
Sbjct: 306 HGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYA 365
Query: 374 IHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEM 433
HG A+ A++LF +M K + +TF +L AC+HAG+ + G LF M+ Y I P +
Sbjct: 366 NHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRL 425
Query: 434 EHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLD 493
EH+ C+VDLLGRAG + EA + I++M ++P++ VWGALL ACR HGN+EL L +
Sbjct: 426 EHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAE 485
Query: 494 MEPRNSGRYALLSNIYAKAGRWDDV 518
+EP NSG LL+++YA AG W+ V
Sbjct: 486 LEPENSGNGLLLTSLYANAGSWESV 510
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 147/288 (51%), Gaps = 17/288 (5%)
Query: 236 MISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPS 295
+++ CG + +AR +FDEM +RD +I + ++E+L+ F +M ++ +K
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLD 116
Query: 296 RHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFE 355
++PS+L N+ + G+ IH V + S + DA + ++LIDMY K G + A +VF
Sbjct: 117 AFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFS 176
Query: 356 KMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVER 415
+ +++ +NAMI G A + +A++A+ L M KP+ +T+ +++ +H E+
Sbjct: 177 DLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEK 236
Query: 416 GLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVE--------EAEKFIESMPVKPNVAV 467
+ M + +P++ + ++ +GLV +A K + + + PN A
Sbjct: 237 VSEILELMC-LDGYKPDVVSWTSII-----SGLVHNFQNEKAFDAFKQMLTHGLYPNSAT 290
Query: 468 WGALLNACRIHGNVELGERV-GW-ILLDMEPRNSGRYALLSNIYAKAG 513
LL AC ++ G+ + G+ ++ +E R ALL ++Y K G
Sbjct: 291 IITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALL-DMYGKCG 337
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 112/241 (46%), Gaps = 11/241 (4%)
Query: 314 QGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLA 373
+GR +H+ + + I + L+ YV+CG++ A +VF++M R++S MIG A
Sbjct: 34 RGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACA 93
Query: 374 IHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLG-LFNSMKRVYEIEPE 432
+G ++++ F +M + K + +L A + +++R G + + + + E +
Sbjct: 94 RNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRN--LLDREFGKMIHCLVLKFSYESD 151
Query: 433 MEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWI-- 490
++D+ + G V A K + + ++ V+ A+++ N + E + +
Sbjct: 152 AFIVSSLIDMYSKFGEVGNARKVFSDLG-EQDLVVFNAMISG--YANNSQADEALNLVKD 208
Query: 491 --LLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEF 548
LL ++P AL+S ++ + V+ + +LM G + S + G VH F
Sbjct: 209 MKLLGIKPDVITWNALISG-FSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNF 267
Query: 549 K 549
+
Sbjct: 268 Q 268
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 262 bits (670), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 161/505 (31%), Positives = 272/505 (53%), Gaps = 18/505 (3%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYA-NPNFNNFTLATKVFDCIPRPNVFVCNIYLKGS 106
KQ H + L+ D ++ +LL+ YA N + N A +F +P NV NI + G
Sbjct: 269 KQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNG---AELIFAEMPEVNVVSWNIMIVGF 325
Query: 107 IENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDV 166
+ K++ +M +PN+ T ++ AC +G V+ G + + + + ++
Sbjct: 326 GQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSA-- 383
Query: 167 HIKSAGIQMYASFGLFREA----RKMLDES---GKTQTDVICWNAMIDGYLKCGEVEAAN 219
+A + Y+++ + EA R+M ++ KT VI + +L+ G+ +
Sbjct: 384 --WNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGK-QIHG 440
Query: 220 EVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDE-MGERDEISWSAIIDGYIKQRCFK 278
V KN + +I+ + C +E + +FD+ + E D W+++I G+
Sbjct: 441 VVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDT 500
Query: 279 EALEVFHQM-QREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTAL 337
+AL +F +M Q + P+ ++L+ C+ + SL GR H V ++ D+ + TAL
Sbjct: 501 KALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETAL 560
Query: 338 IDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNG 397
DMY KCG +D A + F+ + + WN MI G +GR ++A+ L+ KM KP+G
Sbjct: 561 TDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDG 620
Query: 398 VTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIE 457
+TFV VL AC+H+G+VE GL + +SM+R++ IEPE++H+ C+VD LGRAG +E+AEK E
Sbjct: 621 ITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAE 680
Query: 458 SMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDD 517
+ P K + +W LL++CR+HG+V L RV L+ ++P++S Y LLSN Y+ +WDD
Sbjct: 681 ATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDD 740
Query: 518 VARVRKLMKERGIETVPGSSMMDMG 542
A ++ LM + + PG S G
Sbjct: 741 SAALQGLMNKNRVHKTPGQSWTTYG 765
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 201/442 (45%), Gaps = 22/442 (4%)
Query: 49 QAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIE 108
+ H + +KT + FV LL YA F +VF+ + +PN + G
Sbjct: 159 RCHGVAVKTGLDKNIFVGNALLSMYAKCGFI-VDYGVRVFESLSQPNEVSYTAVIGGLAR 217
Query: 109 NGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAV---TGSVKE------GVQFHAFVVK 159
+ +A+ + M + + + A S+ E G Q H ++
Sbjct: 218 ENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALR 277
Query: 160 QGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAAN 219
G GD+H+ ++ +++YA A + E + +V+ WN MI G+ + + +
Sbjct: 278 LGFGGDLHLNNSLLEIYAKNKDMNGAELIFAE--MPEVNVVSWNIMIVGFGQEYRSDKSV 335
Query: 220 EVFVNMPDK----NVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQR 275
E M D N + +++ R G +E R +F + + +W+A++ GY
Sbjct: 336 EFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYE 395
Query: 276 CFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGT 335
++EA+ F QMQ + +KP + L +L+ CA + L+ G+ IH V R I ++ + +
Sbjct: 396 HYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVS 455
Query: 336 ALIDMYVKCGRLDMAWEVFEK-MKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRK 394
LI +Y +C +++++ +F+ + +++ WN+MI G + A+ LF +M+
Sbjct: 456 GLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVL 515
Query: 395 -PNGVTFVGVLNACAHAGMVERGLGLFN-SMKRVYEIEPEMEHFGCVVDLLGRAGLVEEA 452
PN +F VL++C+ + G +K Y + +E + D+ + G ++ A
Sbjct: 516 CPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVET--ALTDMYCKCGEIDSA 573
Query: 453 EKFIESMPVKPNVAVWGALLNA 474
+F +++ ++ N +W +++
Sbjct: 574 RQFFDAV-LRKNTVIWNEMIHG 594
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 153/335 (45%), Gaps = 43/335 (12%)
Query: 196 QTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDE 255
++D N ++D Y++CG+ + A +VF M ++V SWNA ++ + G + A +FD
Sbjct: 38 KSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDG 97
Query: 256 MGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQG 315
M ERD +SW+ +I +++ ++AL V+ +M + PSR L S+L+ C+ V G
Sbjct: 98 MPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFG 157
Query: 316 RWIHSFVERNSIQVDAVLGTALIDMYVKCGRL-DMAWEVFEKMKVREVSTWNAMIGGLAI 374
H + + + +G AL+ MY KCG + D VFE + ++ A+IGGLA
Sbjct: 158 MRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLAR 217
Query: 375 HGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACA--------------------HAGMVE 414
+ +A+++F M + + + V +L+ A H +
Sbjct: 218 ENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALR 277
Query: 415 RGLG----LFNSMKRVYEIEPEME---------------HFGCVVDLLGRAGLVEEAEKF 455
G G L NS+ +Y +M + ++ G+ +++ +F
Sbjct: 278 LGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEF 337
Query: 456 IESM---PVKPNVAVWGALLNACRIHGNVELGERV 487
+ M +PN ++L AC G+VE G R+
Sbjct: 338 LTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRI 372
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 102/453 (22%), Positives = 188/453 (41%), Gaps = 92/453 (20%)
Query: 141 CAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDE--------- 191
C ++G V H F+V+ G+ D ++ + + +Y G ARK+ DE
Sbjct: 21 CKLSGKV-----IHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSW 75
Query: 192 --------------------SGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMP----- 226
G + DV+ WN MI ++ G E A V+ M
Sbjct: 76 NAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFL 135
Query: 227 ----------------------------------DKNVGSWNAMISGLARCGMI-ENART 251
DKN+ NA++S A+CG I +
Sbjct: 136 PSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVR 195
Query: 252 LFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGS 311
+F+ + + +E+S++A+I G ++ EA+++F M + ++ L ++L++ A
Sbjct: 196 VFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREG 255
Query: 312 LDQ---------GRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREV 362
D G+ IH R D L +L+++Y K ++ A +F +M V
Sbjct: 256 CDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNV 315
Query: 363 STWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNS 422
+WN MI G R++ +++ T+M +PN VT + VL AC +G VE G +F+S
Sbjct: 316 VSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSS 375
Query: 423 MKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMP---VKPNVAVWGALLNACRIHG 479
+ +P + + ++ EEA M +KP+ +L++C
Sbjct: 376 IP-----QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLR 430
Query: 480 NVELGERVGWILLDME-PRNSGRYALLSNIYAK 511
+E G+++ +++ E +NS + L +Y++
Sbjct: 431 FLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSE 463
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 87/195 (44%), Gaps = 6/195 (3%)
Query: 28 SQKTVLDILNKKCFHSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKV 87
S TVL ++ C SL H +Q H +++K+ + D FV L Y A +
Sbjct: 521 SFATVLSSCSRLC--SLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKC--GEIDSARQF 576
Query: 88 FDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSV 147
FD + R N + N + G NG +A+ Y KM+ +P+ T+ ++ AC+ +G V
Sbjct: 577 FDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLV 636
Query: 148 KEGVQFHAFVVK-QGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMI 206
+ G++ + + + G+ ++ + G +A K L E+ ++ + W ++
Sbjct: 637 ETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEK-LAEATPYKSSSVLWEILL 695
Query: 207 DGYLKCGEVEAANEV 221
G+V A V
Sbjct: 696 SSCRVHGDVSLARRV 710
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 155/539 (28%), Positives = 267/539 (49%), Gaps = 50/539 (9%)
Query: 43 SLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIY 102
+L+ + H +K FV ++ Y+ N + A F + ++F
Sbjct: 245 ALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSG--NPSEAYLSFRELGDEDMFSWTSI 302
Query: 103 LKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGL 162
+ +G+ ++ + +M P+ L V +G FH FV++
Sbjct: 303 IASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCF 362
Query: 163 TGDVHIKSAGIQMYASFGLFREARKM---LDESGKTQTDVICWNAMIDGY--LKCG---- 213
+ D + ++ + MY F L A K+ + E G + WN M+ GY +KC
Sbjct: 363 SLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEA----WNTMLKGYGKMKCHVKCI 418
Query: 214 -----------EVEAANEVFVNMPDKNVGS----------------------WNAMISGL 240
E+++A+ V ++G+ N++I
Sbjct: 419 ELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLY 478
Query: 241 ARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLP 300
+ G + A +F E + + I+W+A+I Y+ ++A+ +F +M E KPS L
Sbjct: 479 GKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLV 537
Query: 301 SMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR 360
++L C N GSL++G+ IH ++ +++ L ALIDMY KCG L+ + E+F+ +
Sbjct: 538 TLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQK 597
Query: 361 EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLF 420
+ WN MI G +HG E A+ LF +M KP G TF+ +L+AC HAG+VE+G LF
Sbjct: 598 DAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLF 657
Query: 421 NSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGN 480
M + Y+++P ++H+ C+VDLL R+G +EEAE + SMP P+ +WG LL++C HG
Sbjct: 658 LKMHQ-YDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGE 716
Query: 481 VELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMM 539
E+G R+ + +P+N G Y +L+N+Y+ AG+W++ R R++M+E G+ G S++
Sbjct: 717 FEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 121/549 (22%), Positives = 232/549 (42%), Gaps = 83/549 (15%)
Query: 43 SLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIY 102
SL+ L++ +A+I+ + FV+ L+ YA+ + L+++VF + R ++F+ N
Sbjct: 39 SLESLRKHNALIITGGLSENIFVASKLISSYAS--YGKPNLSSRVFHLVTRRDIFLWNSI 96
Query: 103 LKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQ-G 161
+K NG+ +++ + M++ P+ FT P + ACA G H V+K G
Sbjct: 97 IKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGG 156
Query: 162 LTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEV 221
+ + ++ + Y+ G ++A + DE DV+ W A+I G+++ GE E
Sbjct: 157 FDRNTAVGASFVYFYSKCGFLQDACLVFDE--MPDRDVVAWTAIISGHVQNGESEGGLGY 214
Query: 222 FVNM---------PD-----------KNVGSW----------------------NAMISG 239
M P+ N+G+ ++M S
Sbjct: 215 LCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSF 274
Query: 240 LARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLL 299
++ G A F E+G+ D SW++II + +E+ ++F +MQ + + P ++
Sbjct: 275 YSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVI 334
Query: 300 PSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKV 359
++ + + QG+ H FV R+ +D+ + +L+ MY K L +A ++F ++
Sbjct: 335 SCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISE 394
Query: 360 R-EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLG 418
WN M+ G ++LF K+ + + + V+++C+H G V G
Sbjct: 395 EGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKS 454
Query: 419 LFNSMKRVYEIEPEMEHFGCVVDLLGRAGLV---------------------------EE 451
L + + ++ + ++DL G+ G + E+
Sbjct: 455 LHCYVVKT-SLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTNVITWNAMIASYVHCEQ 513
Query: 452 AEKFIE------SMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPR-NSGRYAL 504
+EK I S KP+ LL AC G++E G+ + + + E N A
Sbjct: 514 SEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAA 573
Query: 505 LSNIYAKAG 513
L ++YAK G
Sbjct: 574 LIDMYAKCG 582
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/376 (20%), Positives = 160/376 (42%), Gaps = 48/376 (12%)
Query: 141 CAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVI 200
C + S++ + +A ++ GL+ ++ + S I YAS+G + ++ T+ D+
Sbjct: 34 CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLV--TRRDIF 91
Query: 201 CWNAMIDGYLKCGEVEAANEVFVNMP---------------------------------- 226
WN++I + G+ + F +M
Sbjct: 92 LWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLV 151
Query: 227 ------DKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEA 280
D+N + + ++CG +++A +FDEM +RD ++W+AII G+++ +
Sbjct: 152 LKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGG 211
Query: 281 LEVF---HQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTAL 337
L H + KP+ L C+N+G+L +GR +H F +N + + +++
Sbjct: 212 LGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSM 271
Query: 338 IDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNG 397
Y K G A+ F ++ ++ +W ++I LA G E++ +F +M + P+G
Sbjct: 272 FSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDG 331
Query: 398 VTFVGVLNACAHAGMVERGLGLFNSMKR-VYEIEPEMEHFGCVVDLLGRAGLVEEAEKFI 456
V ++N +V +G + R + ++ + ++ + + L+ AEK
Sbjct: 332 VVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTV--CNSLLSMYCKFELLSVAEKLF 389
Query: 457 ESMPVKPNVAVWGALL 472
+ + N W +L
Sbjct: 390 CRISEEGNKEAWNTML 405
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 260 bits (664), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 152/514 (29%), Positives = 253/514 (49%), Gaps = 42/514 (8%)
Query: 73 YANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKF 132
+A N F A VF +P+ F NI + G G+ +S + +M+ +P+ +
Sbjct: 146 FAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCY 205
Query: 133 TYPTLFKACAVTGS-VKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDE 191
T+ +L AC+ S V G HA ++K G + V K++ + Y G +A + L+
Sbjct: 206 TFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELES 265
Query: 192 SGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENART 251
+E +V SWN++I + G E A
Sbjct: 266 -----------------------IEVLTQV----------SWNSIIDACMKIGETEKALE 292
Query: 252 LFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGS 311
+F E++ ++W+ +I GY + ++AL F +M + + ++L C+ +
Sbjct: 293 VFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLAL 352
Query: 312 LDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGG 371
L G+ IH + Q A +G AL+++Y KCG + A F + +++ +WN M+
Sbjct: 353 LGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFA 412
Query: 372 LAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEP 431
+HG A+ A+KL+ M KP+ VTF+G+L C+H+G+VE G +F SM + Y I
Sbjct: 413 FGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPL 472
Query: 432 EMEHFGCVVDLLGRAGLVEEAEKFIES----MPVKPNVAVWGALLNACRIHGNVELGERV 487
E++H C++D+ GR G + EA+ + + N + W LL AC H + ELG V
Sbjct: 473 EVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREV 532
Query: 488 GWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHE 547
+L EP + LLSN+Y GRW + VR+ M ERG++ PG S +++G +V
Sbjct: 533 SKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVST 592
Query: 548 FKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNT 581
F +GDSSHP+++E L + ++ LQ E +P T
Sbjct: 593 FVVGDSSHPRLEE----LSETLNCLQHEMRNPET 622
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 188/413 (45%), Gaps = 35/413 (8%)
Query: 84 ATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAV 143
A +VFD +P + N L G +AI+ + ++ +++P+ +++ + CA
Sbjct: 23 ARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCAS 82
Query: 144 TGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWN 203
G+VK G + + V++ G + + ++ I MY A K+ + + + W
Sbjct: 83 LGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWC 142
Query: 204 AMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGER---- 259
+++ Y+ + EAA +VFV MP + +WN MISG A CG +E+ +LF EM E
Sbjct: 143 SLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKP 202
Query: 260 DEISWSAIIDGYIKQRCFKEALEVFHQ------MQREKIKPSRHLLPSMLTVCANVGSLD 313
D ++S++++ C ++ V + M + + S+L+ +GS D
Sbjct: 203 DCYTFSSLMNA-----CSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRD 257
Query: 314 QGRWIHSFVERNSIQV-DAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGL 372
+ E SI+V V ++ID +K G + A EVF + + TW MI G
Sbjct: 258 D-----AMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGY 312
Query: 373 AIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYE--IE 430
+G E A++ F +M + + VL+AC+ GL L K ++ I
Sbjct: 313 GRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACS-------GLALLGHGKMIHGCLIH 365
Query: 431 PEMEHFGCV----VDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHG 479
+ + V V+L + G ++EA++ + K V+ W +L A +HG
Sbjct: 366 CGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVS-WNTMLFAFGVHG 417
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 148/342 (43%), Gaps = 63/342 (18%)
Query: 237 ISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSR 296
I+ LA+ G I +AR +FD M E D ++W+ ++ Y + +EA+ +F Q++ KP
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDD 70
Query: 297 HLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCG----------- 345
+ ++L+ CA++G++ GR I S V R+ + +LIDMY KC
Sbjct: 71 YSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRD 130
Query: 346 ----------------------RLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMK 383
+ + A +VF +M R WN MI G A G+ E +
Sbjct: 131 MCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLS 190
Query: 384 LFTKMNGEKRKPNGVTFVGVLNACA------------HAGMVERGLGLFNSMKRVYEIEP 431
LF +M + KP+ TF ++NAC+ HA M++ G
Sbjct: 191 LFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGW------------SS 238
Query: 432 EMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWIL 491
+E V+ + G ++A + +ES+ V V+ W ++++AC G E V
Sbjct: 239 AVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVS-WNSIIDACMKIGETEKALEV---- 293
Query: 492 LDMEP-RNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIET 532
+ P +N + + Y + G + R M + G+++
Sbjct: 294 FHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDS 335
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 86/194 (44%), Gaps = 5/194 (2%)
Query: 335 TALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRK 394
T+ I K GR+ A +VF+ M + WN M+ + G ++A+ LFT++ K
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 395 PNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEK 454
P+ +F +L+ CA G V+ G + + + R + ++D+ G+ A K
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIR-SGFCASLPVNNSLIDMYGKCSDTLSANK 126
Query: 455 FIESMPVKP-NVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAG 513
M N W +LL A + N E E + ++M R + + ++ + +A G
Sbjct: 127 VFRDMCCDSRNEVTWCSLLFA---YMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCG 183
Query: 514 RWDDVARVRKLMKE 527
+ + + K M E
Sbjct: 184 KLESCLSLFKEMLE 197
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 260 bits (664), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 125/340 (36%), Positives = 201/340 (59%)
Query: 241 ARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLP 300
A G ++ A LF + RD I W+A+I GY+++ +E L +++ M++ +I P ++
Sbjct: 154 ALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFA 213
Query: 301 SMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR 360
S+ C+ + L+ G+ H+ + + I+ + ++ +AL+DMY KC VF+++ R
Sbjct: 214 SVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTR 273
Query: 361 EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLF 420
V TW ++I G HG+ + +K F KM E +PN VTF+ VL AC H G+V++G F
Sbjct: 274 NVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHF 333
Query: 421 NSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGN 480
SMKR Y IEPE +H+ +VD LGRAG ++EA +F+ P K + VWG+LL ACRIHGN
Sbjct: 334 YSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGN 393
Query: 481 VELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMD 540
V+L E L+++P N G Y + +N YA G + ++VR+ M+ G++ PG S ++
Sbjct: 394 VKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIE 453
Query: 541 MGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPN 580
+ G+VH F D+SH ++IY + +M Y P+
Sbjct: 454 LQGEVHRFMKDDTSHRLSEKIYKKVHEMTSFFMDIDYYPD 493
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 138/324 (42%), Gaps = 46/324 (14%)
Query: 133 TYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDES 192
TY L + C +G + HA + G + ++K + +YA G + A +L S
Sbjct: 110 TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTA-GILFRS 168
Query: 193 GKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM------PDK------------------ 228
K + D+I WNAMI GY++ G + ++ +M PD+
Sbjct: 169 LKIR-DLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEH 227
Query: 229 ---------------NVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIK 273
N+ +A++ +C + +FD++ R+ I+W+++I GY
Sbjct: 228 GKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGY 287
Query: 274 QRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNS--IQVDA 331
E L+ F +M+ E +P+ +LT C + G +D+G W H + + I+ +
Sbjct: 288 HGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKG-WEHFYSMKRDYGIEPEG 346
Query: 332 VLGTALIDMYVKCGRLDMAWEVFEKMKVRE-VSTWNAMIGGLAIHGRAEDAMKLFTKMNG 390
A++D + GRL A+E K +E W +++G IHG + ++L
Sbjct: 347 QHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVK-LLELAATKFL 405
Query: 391 EKRKPNGVTFVGVLNACAHAGMVE 414
E NG +V N A G+ E
Sbjct: 406 ELDPTNGGNYVVFANGYASCGLRE 429
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/323 (19%), Positives = 139/323 (43%), Gaps = 23/323 (7%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSI 107
K+ HA + + ++ LL YA + A +F + ++ N + G +
Sbjct: 128 KRIHAQMFVVGFALNEYLKVKLLILYALSG--DLQTAGILFRSLKIRDLIPWNAMISGYV 185
Query: 108 ENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVH 167
+ G + + Y+ M P+++T+ ++F+AC+ ++ G + HA ++K+ + ++
Sbjct: 186 QKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNII 245
Query: 168 IKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPD 227
+ SA + MY F + ++ D+ + +VI W ++I GY G+V + F M +
Sbjct: 246 VDSALVDMYFKCSSFSDGHRVFDQL--STRNVITWTSLISGYGYHGKVSEVLKCFEKMKE 303
Query: 228 K----NVGSWNAMISGLARCGMIENARTLFDEMG-----ERDEISWSAIIDGYIKQRCFK 278
+ N ++ +++ G+++ F M E + ++A++D + +
Sbjct: 304 EGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQ 363
Query: 279 EALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLG---T 335
EA E + + K + S+L C G++ + +++D G
Sbjct: 364 EAYEF---VMKSPCKEHPPVWGSLLGACRIHGNVK----LLELAATKFLELDPTNGGNYV 416
Query: 336 ALIDMYVKCGRLDMAWEVFEKMK 358
+ Y CG + A +V KM+
Sbjct: 417 VFANGYASCGLREAASKVRRKME 439
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 4/181 (2%)
Query: 302 MLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVRE 361
+L C +G+ IH+ + ++ L L+ +Y G L A +F +K+R+
Sbjct: 114 LLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRD 173
Query: 362 VSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFN 421
+ WNAMI G G ++ + ++ M + P+ TF V AC+ +E G
Sbjct: 174 LIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHA 233
Query: 422 SM-KRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGN 480
M KR I+ + +VD+ + + + + + + NV W +L++ HG
Sbjct: 234 VMIKRC--IKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTR-NVITWTSLISGYGYHGK 290
Query: 481 V 481
V
Sbjct: 291 V 291
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 102/231 (44%), Gaps = 10/231 (4%)
Query: 44 LQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYL 103
L+H K+AHA+++K + V L+ Y + +F+ +VFD + NV +
Sbjct: 225 LEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCS--SFSDGHRVFDQLSTRNVITWTSLI 282
Query: 104 KGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQ-FHAFVVKQGL 162
G +G+ + + C+ KM RPN T+ + AC G V +G + F++ G+
Sbjct: 283 SGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGI 342
Query: 163 TGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEV---EAAN 219
+ +A + G +EA + + +S + + W +++ G V E A
Sbjct: 343 EPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPV-WGSLLGACRIHGNVKLLELAA 401
Query: 220 EVFVNMPDKNVGSWNAMISGLARCGMIENA---RTLFDEMGERDEISWSAI 267
F+ + N G++ +G A CG+ E A R + G + + +S I
Sbjct: 402 TKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQI 452
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 259 bits (661), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 127/332 (38%), Positives = 209/332 (62%), Gaps = 2/332 (0%)
Query: 244 GMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSML 303
G +ENA +F+EM ER+ +SW+A+I G+ ++ L+++ +M++ P+ + ++L
Sbjct: 169 GEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALL 228
Query: 304 TVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVS 363
+ C G+L QGR +H ++ + +LI MY KCG L A+ +F++ ++V
Sbjct: 229 SACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVV 288
Query: 364 TWNAMIGGLAIHGRAEDAMKLFTKMNGEK-RKPNGVTFVGVLNACAHAGMVERGLGLFNS 422
+WN+MI G A HG A A++LF M + KP+ +T++GVL++C HAG+V+ G FN
Sbjct: 289 SWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNL 348
Query: 423 MKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVE 482
M + ++PE+ H+ C+VDLLGR GL++EA + IE+MP+KPN +WG+LL +CR+HG+V
Sbjct: 349 MAE-HGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVW 407
Query: 483 LGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMG 542
G R L +EP + + L+N+YA G W + A VRKLMK++G++T PG S +++
Sbjct: 408 TGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEIN 467
Query: 543 GKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQI 574
V FK D S+ +M EI +L ++D ++
Sbjct: 468 NYVFMFKAEDGSNCRMLEIVHVLHCLIDHMEF 499
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 147/324 (45%), Gaps = 19/324 (5%)
Query: 51 HAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENG 110
H + LK D ++ +L+ Y + A KVF+ +P NV + G +
Sbjct: 143 HCLALKGGFISDVYLGSSLVVLYRDSG--EVENAYKVFEEMPERNVVSWTAMISGFAQEW 200
Query: 111 EPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKS 170
+ Y KM S PN +T+ L AC +G++ +G H + GL +HI +
Sbjct: 201 RVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISN 260
Query: 171 AGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVF-VNMPDKN 229
+ I MY G ++A ++ D+ + DV+ WN+MI GY + G A E+F + MP
Sbjct: 261 SLISMYCKCGDLKDAFRIFDQF--SNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSG 318
Query: 230 VG----SWNAMISGLARCGMIENARTLFDEMGE---RDEIS-WSAIIDGYIKQRCFKEAL 281
++ ++S G+++ R F+ M E + E++ +S ++D + +EAL
Sbjct: 319 TKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEAL 378
Query: 282 EVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVD-AVLGTALIDM 340
E+ M +KP+ + S+L C G + G I + ER ++ D A L ++
Sbjct: 379 ELIENM---PMKPNSVIWGSLLFSCRVHGDVWTG--IRAAEERLMLEPDCAATHVQLANL 433
Query: 341 YVKCGRLDMAWEVFEKMKVREVST 364
Y G A V + MK + + T
Sbjct: 434 YASVGYWKEAATVRKLMKDKGLKT 457
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 127/288 (44%), Gaps = 43/288 (14%)
Query: 130 NKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKML 189
+ + + ++C + + G FH +K G DV++ S+ + +Y G A K+
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 190 DESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM----PDKNVGSW------------ 233
+E + +V+ W AMI G+ + V+ +++ M D N ++
Sbjct: 179 EE--MPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGA 236
Query: 234 -----------------------NAMISGLARCGMIENARTLFDEMGERDEISWSAIIDG 270
N++IS +CG +++A +FD+ +D +SW+++I G
Sbjct: 237 LGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAG 296
Query: 271 YIKQRCFKEALEVFH-QMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQV 329
Y + +A+E+F M + KP +L+ C + G + +GR + + + ++
Sbjct: 297 YAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKP 356
Query: 330 DAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVST-WNAMIGGLAIHG 376
+ + L+D+ + G L A E+ E M ++ S W +++ +HG
Sbjct: 357 ELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHG 404
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 59/118 (50%)
Query: 299 LPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMK 358
L S + C G H + D LG++L+ +Y G ++ A++VFE+M
Sbjct: 123 LSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMP 182
Query: 359 VREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERG 416
R V +W AMI G A R + +KL++KM PN TF +L+AC +G + +G
Sbjct: 183 ERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQG 240
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 258 bits (659), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 165/567 (29%), Positives = 286/567 (50%), Gaps = 47/567 (8%)
Query: 44 LQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYL 103
L+ + H I + D + +LL Y+ + + ++F+ I + N V +
Sbjct: 218 LRIARSVHGQITRKMFDLDETLCNSLLTMYSKCG--DLLSSERIFEKIAKKNA-VSWTAM 274
Query: 104 KGSIENGE-PHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGL 162
S GE KA+ + +M+ PN T ++ +C + G ++EG H F V++ L
Sbjct: 275 ISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRREL 334
Query: 163 TGDVHIKS-AGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEV 221
+ S A +++YA G + +L + +++ WN++I Y G V A +
Sbjct: 335 DPNYESLSLALVELYAECGKLSDCETVLRVV--SDRNIVAWNSLISLYAHRGMVIQALGL 392
Query: 222 FVNM------PD-----------KNVG---------------------SWNAMISGLARC 243
F M PD +N G N++I ++
Sbjct: 393 FRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKS 452
Query: 244 GMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSML 303
G +++A T+F+++ R ++W++++ G+ + EA+ +F M ++ + +++
Sbjct: 453 GSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVI 512
Query: 304 TVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVS 363
C+++GSL++G+W+H + + ++ D TALIDMY KCG L+ A VF M R +
Sbjct: 513 QACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIV 571
Query: 364 TWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSM 423
+W++MI +HGR A+ F +M KPN V F+ VL+AC H+G VE G FN M
Sbjct: 572 SWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM 631
Query: 424 KRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVEL 483
K + + P EHF C +DLL R+G ++EA + I+ MP + +VWG+L+N CRIH +++
Sbjct: 632 KS-FGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDI 690
Query: 484 GERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGG 543
+ + L D+ ++G Y LLSNIYA+ G W++ R+R MK ++ VPG S +++
Sbjct: 691 IKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQ 750
Query: 544 KVHEFKMGDSSHPQMKEIYLMLEKMMD 570
KV F G+ + Q EIY L + +
Sbjct: 751 KVFRFGAGEENRIQTDEIYRFLGNLQN 777
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/483 (23%), Positives = 227/483 (46%), Gaps = 55/483 (11%)
Query: 43 SLQHLKQAHAIILKTAHFH-DHFVSGTLLKCYA---NPNFNNFTLATKVFDCIPRPNVFV 98
SL+ + Q HA +L T D L++ YA +P+ + VF+ P P+ F+
Sbjct: 13 SLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRL-----VFEAFPYPDSFM 67
Query: 99 CNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGS-VKEGVQFHAFV 157
+ +K ++ AI YH+++ ++ +KF +P++ +ACA + + G + H +
Sbjct: 68 YGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRI 127
Query: 158 VKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEA 217
+K G+ D I+++ + MY G +A K+ D G D++ W+ ++ L+ GEV
Sbjct: 128 IKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFD--GMPVRDLVAWSTLVSSCLENGEVVK 185
Query: 218 ANEVFVNMPDKNVGS---------------------------------------WNAMIS 238
A +F M D V N++++
Sbjct: 186 ALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLT 245
Query: 239 GLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHL 298
++CG + ++ +F+++ +++ +SW+A+I Y + ++AL F +M + I+P+
Sbjct: 246 MYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVT 305
Query: 299 LPSMLTVCANVGSLDQGRWIHSFVERNSIQVD-AVLGTALIDMYVKCGRLDMAWEVFEKM 357
L S+L+ C +G + +G+ +H F R + + L AL+++Y +CG+L V +
Sbjct: 306 LYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVV 365
Query: 358 KVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGL 417
R + WN++I A G A+ LF +M ++ KP+ T ++AC +AG+V G
Sbjct: 366 SDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGK 425
Query: 418 GLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRI 477
+ + R ++ E ++D+ ++G V+ A + + +V W ++L
Sbjct: 426 QIHGHVIRT-DVSDEFVQ-NSLIDMYSKSGSVDSASTVFNQIKHR-SVVTWNSMLCGFSQ 482
Query: 478 HGN 480
+GN
Sbjct: 483 NGN 485
Score = 159 bits (402), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 146/610 (23%), Positives = 259/610 (42%), Gaps = 93/610 (15%)
Query: 17 LSSDQAPSSKLSQKTVLDILNKKCFHSLQHLK---QAHAIILKTAHFHDHFVSGTLLKCY 73
L S+ SK +VL + C S +HL + H I+K D + +LL Y
Sbjct: 91 LVSETTQISKFVFPSVL----RACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMY 146
Query: 74 ANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFT 133
N + A KVFD +P ++ + + +ENGE KA+ + M+ P+ T
Sbjct: 147 GQTG--NLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVT 204
Query: 134 YPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESG 193
++ + CA G ++ H + ++ D + ++ + MY+ G + ++ ++
Sbjct: 205 MISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIA 264
Query: 194 KTQTDVICWNAMIDGYLKCGEVEAANEVFVNMP--------------------------- 226
K + + W AMI Y + E A F M
Sbjct: 265 K--KNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREG 322
Query: 227 ------------DKNVGSWN-AMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIK 273
D N S + A++ A CG + + T+ + +R+ ++W+++I Y
Sbjct: 323 KSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAH 382
Query: 274 QRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVL 333
+ +AL +F QM ++IKP L S ++ C N G + G+ IH V R + D +
Sbjct: 383 RGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-DEFV 441
Query: 334 GTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKR 393
+LIDMY K G +D A VF ++K R V TWN+M+ G + +G + +A+ LF M
Sbjct: 442 QNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYL 501
Query: 394 KPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAE 453
+ N VTF+ V+ AC+ G +E+G + + K + ++ ++D+ + G + AE
Sbjct: 502 EMNEVTFLAVIQACSSIGSLEKGKWVHH--KLIISGLKDLFTDTALIDMYAKCGDLNAAE 559
Query: 454 KFIESMP----------------------------------VKPNVAVWGALLNACRIHG 479
+M KPN V+ +L+AC G
Sbjct: 560 TVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSG 619
Query: 480 NVELGERVGWIL--LDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSS 537
+VE G+ ++ + P NS +A ++ +++G + R K M +V GS
Sbjct: 620 SVEEGKYYFNLMKSFGVSP-NSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGS- 677
Query: 538 MMDMGGKVHE 547
+ G ++H+
Sbjct: 678 -LVNGCRIHQ 686
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 153/498 (30%), Positives = 254/498 (51%), Gaps = 42/498 (8%)
Query: 84 ATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAV 143
A KVFD IP +V + ++ +A + +++ L RPN+FT+ T+ +
Sbjct: 46 AHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTT 105
Query: 144 TGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWN 203
+ VK G Q H + +K GL +V + SA + Y +AR
Sbjct: 106 SRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDAR----------------- 148
Query: 204 AMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEIS 263
+C F + D NV S +ISG + E A +LF M ER ++
Sbjct: 149 -------RC---------FDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVT 192
Query: 264 WSAIIDGYIKQRCFKEALEVFHQMQREKIK-PSRHLLPSMLTVCANVGSLDQGRWIHS-F 321
W+A+I G+ + +EA+ F M RE + P+ P +T +N+ S G+ IH+
Sbjct: 193 WNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACA 252
Query: 322 VERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMK--VREVSTWNAMIGGLAIHGRAE 379
++ + + + +LI Y KCG ++ + F K++ R + +WN+MI G A +GR E
Sbjct: 253 IKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGE 312
Query: 380 DAMKLFTKMNGEKR-KPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEP---EMEH 435
+A+ +F KM + +PN VT +GVL AC HAG+++ G FN Y+ +P E+EH
Sbjct: 313 EAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD-DPNLLELEH 371
Query: 436 FGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDME 495
+ C+VD+L R+G +EAE+ I+SMP+ P + W ALL C+IH N L + +L+++
Sbjct: 372 YACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELD 431
Query: 496 PRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSH 555
PR+ Y +LSN Y+ W +V+ +R+ MKE G++ G S +++ ++ F D ++
Sbjct: 432 PRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNN 491
Query: 556 PQMKEIYLMLEKMMDKLQ 573
E+Y ML + L+
Sbjct: 492 ELKDEVYRMLALVSQHLE 509
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 131/292 (44%), Gaps = 12/292 (4%)
Query: 245 MIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLT 304
+I NA +FDE+ E D IS +A+I ++K+ EA + F ++ I+P+ +++
Sbjct: 42 LIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIG 101
Query: 305 VCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVST 364
+ G+ +H + + + + +G+A+++ YVK L A F+ + V +
Sbjct: 102 SSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVS 161
Query: 365 WNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMK 424
+I G E+A+ LF M + + VT+ V+ + G E + F M
Sbjct: 162 ITNLISGYLKKHEFEEALSLFRAM----PERSVVTWNAVIGGFSQTGRNEEAVNTFVDML 217
Query: 425 RVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVK-----PNVAVWGALLNACRIHG 479
R + P F C + + A K I + +K NV VW +L++ G
Sbjct: 218 REGVVIPNESTFPCAITAISNIA-SHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCG 276
Query: 480 NVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDD-VARVRKLMKERGI 530
N+E + + L+ E RN + + YA GR ++ VA K++K+ +
Sbjct: 277 NME-DSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNL 327
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 117/286 (40%), Gaps = 49/286 (17%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYA----------------NPNF------------- 78
KQ H LK + FV +L CY +PN
Sbjct: 113 KQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKK 172
Query: 79 NNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMM----VLNSRPNKFTY 134
+ F A +F +P +V N + G + G +A++ + M+ V+ PN+ T+
Sbjct: 173 HEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVI---PNESTF 229
Query: 135 PTLFKACAVTGSVKEGVQFHAFVVK-QGLTGDVHIKSAGIQMYASFGLFREARKMLDESG 193
P A + S G HA +K G +V + ++ I Y+ G ++ ++
Sbjct: 230 PCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLE 289
Query: 194 KTQTDVICWNAMIDGYLKCGEVEAANEVFVNM-PDKNVGSWNAMISG-LARC---GMIEN 248
+ Q +++ WN+MI GY G E A +F M D N+ N I G L C G+I+
Sbjct: 290 EEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQE 349
Query: 249 ARTLFDE-MGERDEIS------WSAIIDGYIKQRCFKEALEVFHQM 287
F++ + + D+ + ++ ++D + FKEA E+ M
Sbjct: 350 GYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSM 395
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 256 bits (653), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 135/351 (38%), Positives = 215/351 (61%), Gaps = 6/351 (1%)
Query: 220 EVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKE 279
EV + D +V N +I C +AR +FDEM ER+ +SW++I+ ++
Sbjct: 138 EVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNL 197
Query: 280 ALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALID 339
E F +M ++ P + +L+ C G+L G+ +HS V ++++ LGTAL+D
Sbjct: 198 VFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVD 255
Query: 340 MYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKR-KPNGV 398
MY K G L+ A VFE+M + V TW+AMI GLA +G AE+A++LF+KM E +PN V
Sbjct: 256 MYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYV 315
Query: 399 TFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIES 458
TF+GVL AC+H G+V+ G F+ M+++++I+P M H+G +VD+LGRAG + EA FI+
Sbjct: 316 TFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKK 375
Query: 459 MPVKPNVAVWGALLNACRIHGNVE---LGERVGWILLDMEPRNSGRYALLSNIYAKAGRW 515
MP +P+ VW LL+AC IH + + +GE+V L+++EP+ SG +++N +A+A W
Sbjct: 376 MPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMW 435
Query: 516 DDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLE 566
+ A VR++MKE ++ + G S +++GG H F G + IY +L+
Sbjct: 436 AEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYELLD 486
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 178/393 (45%), Gaps = 43/393 (10%)
Query: 28 SQKTVLDILNKKCFHSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKV 87
S+K I K C S++HL Q H I ++ +D F+ L++ + + A +
Sbjct: 11 SRKHQCLIFLKLC-SSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTL 69
Query: 88 FDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSV 147
N+ +G + P ++I Y +M +PNK T+P L KACA +
Sbjct: 70 LLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGL 129
Query: 148 KEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMID 207
G Q V+K G DV++ + I +Y + +ARK+ DE T+ +V+ WN+++
Sbjct: 130 TAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDE--MTERNVVSWNSIMT 187
Query: 208 GYLKCGEVEAANEVFVNM------PDK-------------------------------NV 230
++ G++ E F M PD+ N
Sbjct: 188 ALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELELNC 247
Query: 231 GSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQRE 290
A++ A+ G +E AR +F+ M +++ +WSA+I G + +EAL++F +M +E
Sbjct: 248 RLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKE 307
Query: 291 -KIKPSRHLLPSMLTVCANVGSLDQG-RWIHSFVERNSIQVDAVLGTALIDMYVKCGRLD 348
++P+ +L C++ G +D G ++ H + + I+ + A++D+ + GRL+
Sbjct: 308 SSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLN 367
Query: 349 MAWEVFEKMKVR-EVSTWNAMIGGLAIHGRAED 380
A++ +KM + W ++ +IH +D
Sbjct: 368 EAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDD 400
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 119/246 (48%), Gaps = 4/246 (1%)
Query: 237 ISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSR 296
+S L+ + ARTL + +W+ + GY E++ V+ +M+R IKP++
Sbjct: 54 VSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNK 113
Query: 297 HLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEK 356
P +L CA+ L GR I V ++ D +G LI +Y C + A +VF++
Sbjct: 114 LTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDE 173
Query: 357 MKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERG 416
M R V +WN+++ L +G+ + F +M G++ P+ T V +L+AC G + G
Sbjct: 174 MTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSAC--GGNLSLG 231
Query: 417 LGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACR 476
L +S V E+E +VD+ ++G +E A E M V NV W A++
Sbjct: 232 -KLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERM-VDKNVWTWSAMIVGLA 289
Query: 477 IHGNVE 482
+G E
Sbjct: 290 QYGFAE 295
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 161/556 (28%), Positives = 265/556 (47%), Gaps = 76/556 (13%)
Query: 100 NIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVK 159
N+ + +N + I+ Y +M+ RP+ FTYP++ KAC T V G H +
Sbjct: 113 NVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEV 172
Query: 160 QGLTGDVHIKSAGIQMY-------------------------------ASFGLFREARKM 188
+++ +A I MY AS G++ EA ++
Sbjct: 173 SSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFEL 232
Query: 189 LDE---SGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPD-----------------K 228
D+ SG + VI WN + G L+ G A + M +
Sbjct: 233 FDKMWFSG-VEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACS 291
Query: 229 NVGSW----------------------NAMISGLARCGMIENARTLFDEMGERDEISWSA 266
+G+ N +I+ ++C + +A +F + E +W++
Sbjct: 292 LIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNS 351
Query: 267 IIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNS 326
II GY + +EA + +M +P+ L S+L +CA + +L G+ H ++ R
Sbjct: 352 IISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRK 411
Query: 327 IQVD-AVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLF 385
D +L +L+D+Y K G++ A +V + M R+ T+ ++I G G A+ LF
Sbjct: 412 CFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALF 471
Query: 386 TKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGR 445
+M KP+ VT V VL+AC+H+ +V G LF M+ Y I P ++HF C+VDL GR
Sbjct: 472 KEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGR 531
Query: 446 AGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALL 505
AG + +A+ I +MP KP+ A W LLNAC IHGN ++G+ LL+M+P N G Y L+
Sbjct: 532 AGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLI 591
Query: 506 SNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLML 565
+N+YA AG W +A VR +M++ G++ PG + +D F +GD+S P+ Y +L
Sbjct: 592 ANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLL 651
Query: 566 EKMMDKLQIE-GYSPN 580
+ + ++ GY+ N
Sbjct: 652 DGLNQLMKDNAGYAIN 667
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 119/492 (24%), Positives = 191/492 (38%), Gaps = 120/492 (24%)
Query: 136 TLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKT 195
+L AC + GVQ HA + G+ + + Y++F L EA+ +++ S
Sbjct: 48 SLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDIL 107
Query: 196 QTDVICWNAMIDGYLK---CGEVEAANEVFVN---MPDK--------------------- 228
+ WN +I Y K EV AA + V+ PD
Sbjct: 108 HP--LPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRV 165
Query: 229 -----NVGSW-------NAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRC 276
V S+ NA+IS R + AR LFD M ERD +SW+A+I+ Y +
Sbjct: 166 VHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGM 225
Query: 277 FKEALEVFHQMQREKIKPS---------------------------RHLLPSM------- 302
+ EA E+F +M ++ S R+ S+
Sbjct: 226 WSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMII 285
Query: 303 -LTVCANVGSLDQGRWIHSFVERNSIQ-VDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR 360
L C+ +G++ G+ IH +S +D V T LI MY KC L A VF + +
Sbjct: 286 GLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNT-LITMYSKCKDLRHALIVFRQTEEN 344
Query: 361 EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERG---- 416
+ TWN++I G A ++E+A L +M +PN +T +L CA ++ G
Sbjct: 345 SLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFH 404
Query: 417 ------------LGLFNSMKRVYEIEPEMEHFGCVVDLL------------------GRA 446
L+NS+ VY ++ V DL+ G
Sbjct: 405 CYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEG 464
Query: 447 GLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGR----- 501
G+ K + +KP+ A+L+AC V GER + + M+ R
Sbjct: 465 GVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGER---LFMKMQCEYGIRPCLQH 521
Query: 502 YALLSNIYAKAG 513
++ + ++Y +AG
Sbjct: 522 FSCMVDLYGRAG 533
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/449 (20%), Positives = 174/449 (38%), Gaps = 98/449 (21%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFD---------------CIP 92
+ H I +++ +V L+ Y F N +A ++FD C
Sbjct: 164 RVVHGSIEVSSYKSSLYVCNALISMY--KRFRNMGIARRLFDRMFERDAVSWNAVINCYA 221
Query: 93 RP--------------------NVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKF 132
+V NI G ++ G A+ +M + +
Sbjct: 222 SEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPV 281
Query: 133 TYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDES 192
KAC++ G+++ G + H + G ++++ I MY+ R A + +
Sbjct: 282 AMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQ- 340
Query: 193 GKTQTDVIC-WNAMIDGYLKCGEVEAANEVFVNM------PDK-NVGS------------ 232
T+ + +C WN++I GY + + E A+ + M P+ + S
Sbjct: 341 --TEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQ 398
Query: 233 ---------------------WNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGY 271
WN+++ A+ G I A+ + D M +RDE++++++IDGY
Sbjct: 399 HGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGY 458
Query: 272 IKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDA 331
Q AL +F +M R IKP + ++L+ C++ + +G ER +++
Sbjct: 459 GNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEG-------ERLFMKMQC 511
Query: 332 VLG--------TALIDMYVKCGRLDMAWEVFEKMKVREV-STWNAMIGGLAIHGRAEDAM 382
G + ++D+Y + G L A ++ M + +TW ++ IHG +
Sbjct: 512 EYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGK 571
Query: 383 KLFTKMNGEKRKPNGVTFVGVLNACAHAG 411
K+ E + N +V + N A AG
Sbjct: 572 WAAEKLL-EMKPENPGYYVLIANMYAAAG 599
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/321 (20%), Positives = 136/321 (42%), Gaps = 31/321 (9%)
Query: 7 NFPSGLKPIELSSDQAPSSKLSQKTVLDILNKKCFHSLQHLKQAHAIILKTAHFHDHFVS 66
NFP+ L P+ + ++ + +++ K+ H + + +++ V
Sbjct: 273 NFPTSLDPVAM--------------IIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVR 318
Query: 67 GTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLN 126
TL+ Y+ + A VF ++ N + G + + +A +M+V
Sbjct: 319 NTLITMYSK--CKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAG 376
Query: 127 SRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGD-VHIKSAGIQMYASFGLFREA 185
+PN T ++ CA +++ G +FH +++++ D + ++ + +YA G A
Sbjct: 377 FQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAA 436
Query: 186 RKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVG----SWNAMISGLA 241
+++ D K D + + ++IDGY GE A +F M + + A++S +
Sbjct: 437 KQVSDLMSK--RDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACS 494
Query: 242 RCGMIENARTLFDEM----GERDEIS-WSAIIDGYIKQRCFKEALEVFHQMQREKIKPSR 296
++ LF +M G R + +S ++D Y + +A ++ H M KPS
Sbjct: 495 HSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNM---PYKPSG 551
Query: 297 HLLPSMLTVCANVGSLDQGRW 317
++L C G+ G+W
Sbjct: 552 ATWATLLNACHIHGNTQIGKW 572
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 253 bits (647), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 158/482 (32%), Positives = 251/482 (52%), Gaps = 67/482 (13%)
Query: 57 TAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAI 116
T + + +S L+ Y+ N + F + VF +P N+F NI + +G K+I
Sbjct: 60 TFLYSNVVLSSKLVLAYSKLN-HLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSI 118
Query: 117 SCYHKMMVLNS-RPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQM 175
+ +M + RP+ FT P + +AC+ +
Sbjct: 119 DLFLRMWRESCVRPDDFTLPLILRACSAS------------------------------- 147
Query: 176 YASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNA 235
REA+ SG D+I ++ C ++ ++ +FV+ +A
Sbjct: 148 -------REAK-----SG----DLI--------HVLCLKLGFSSSLFVS---------SA 174
Query: 236 MISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPS 295
++ G + +AR LFD+M RD + ++A+ GY++Q L +F +M
Sbjct: 175 LVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALD 234
Query: 296 RHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFE 355
++ S+L C +G+L G+ +H + R + LG A+ DMYVKC LD A VF
Sbjct: 235 SVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFV 294
Query: 356 KMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVER 415
M R+V +W+++I G + G + KLF +M E +PN VTF+GVL+ACAH G+VE+
Sbjct: 295 NMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEK 354
Query: 416 GLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNAC 475
F M+ Y I PE++H+ V D + RAGL+EEAEKF+E MPVKP+ AV GA+L+ C
Sbjct: 355 SWLYFRLMQE-YNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGC 413
Query: 476 RIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPG 535
+++GNVE+GERV L+ ++PR + Y L+ +Y+ AGR+D+ +R+ MKE+ I VPG
Sbjct: 414 KVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPG 473
Query: 536 SS 537
S
Sbjct: 474 CS 475
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 154/486 (31%), Positives = 240/486 (49%), Gaps = 41/486 (8%)
Query: 84 ATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAV 143
A +F +P+PNV N + G ++ G P +A+ +M + F P KAC+
Sbjct: 192 AVTLFHRMPQPNVVSWNCLISGFVDKGSP-RALEFLVRMQREGLVLDGFALPCGLKACSF 250
Query: 144 TGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFG-LFREARKMLDESGKTQTDVICW 202
G + G Q H VVK GL SA I MY++ G L A E + V W
Sbjct: 251 GGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVW 310
Query: 203 NAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGL---------------------- 240
N+M+ G+L E EAA + + + ++ + +SG
Sbjct: 311 NSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVV 370
Query: 241 -----------------ARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEV 283
A G I++A LF + +D I++S +I G +K A +
Sbjct: 371 SGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYL 430
Query: 284 FHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVK 343
F ++ + + + ++ ++L VC+++ SL G+ IH + + + V TAL+DMYVK
Sbjct: 431 FRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVK 490
Query: 344 CGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGV 403
CG +D +F+ M R+V +W +I G +GR E+A + F KM +PN VTF+G+
Sbjct: 491 CGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGL 550
Query: 404 LNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKP 463
L+AC H+G++E +MK Y +EP +EH+ CVVDLLG+AGL +EA + I MP++P
Sbjct: 551 LSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEP 610
Query: 464 NVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRK 523
+ +W +LL AC H N L + LL P + Y LSN YA G WD +++VR+
Sbjct: 611 DKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVRE 670
Query: 524 LMKERG 529
K+ G
Sbjct: 671 AAKKLG 676
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 120/431 (27%), Positives = 198/431 (45%), Gaps = 44/431 (10%)
Query: 49 QAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIE 108
QAH I K + F++ ++ Y + F + A KVFD + N+ + G
Sbjct: 28 QAHVI--KQGISQNVFIANNVISMYVD--FRLLSDAHKVFDEMSERNIVTWTTMVSGYTS 83
Query: 109 NGEPHKAISCYHKMMVLNSRP-NKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVH 167
+G+P+KAI Y +M+ N+F Y + KAC + G ++ G+ + + K+ L GDV
Sbjct: 84 DGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDV- 142
Query: 168 IKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPD 227
+ N+++D Y+K G + AN F +
Sbjct: 143 --------------------------------VLMNSVVDMYVKNGRLIEANSSFKEILR 170
Query: 228 KNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQM 287
+ SWN +ISG + G+++ A TLF M + + +SW+ +I G++ + ALE +M
Sbjct: 171 PSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGS-PRALEFLVRM 229
Query: 288 QREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRL 347
QRE + LP L C+ G L G+ +H V ++ ++ +ALIDMY CG L
Sbjct: 230 QREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSL 289
Query: 348 DMAWEVF--EKMKVR-EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVL 404
A +VF EK+ V V+ WN+M+ G I+ E A+ L ++ + T G L
Sbjct: 290 IYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGAL 349
Query: 405 NACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPN 464
C + + GL + +S+ V E + +VDL G +++A K +P K
Sbjct: 350 KICINYVNLRLGLQV-HSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDI 408
Query: 465 VAVWGALLNAC 475
+A G L+ C
Sbjct: 409 IAFSG-LIRGC 418
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 139/321 (43%), Gaps = 21/321 (6%)
Query: 49 QAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIE 108
Q H++++ + + D+ V L+ +AN N A K+F +P ++ + ++G ++
Sbjct: 363 QVHSLVVVSGYELDYIVGSILVDLHAN--VGNIQDAHKLFHRLPNKDIIAFSGLIRGCVK 420
Query: 109 NGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHI 168
+G A + +++ L ++F + K C+ S+ G Q H +K+G +
Sbjct: 421 SGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVT 480
Query: 169 KSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM--- 225
+A + MY G + D G + DV+ W +I G+ + G VE A F M
Sbjct: 481 ATALVDMYVKCGEIDNGVVLFD--GMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINI 538
Query: 226 -PDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEIS-----WSAIIDGYIKQRCFKE 279
+ N ++ ++S G++E AR+ + M + + ++D + F+E
Sbjct: 539 GIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQE 598
Query: 280 ALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVER--NSIQVDAVLGTAL 337
A E+ ++M E P + + S+LT C G+ + E+ D + T+L
Sbjct: 599 ANELINKMPLE---PDKTIWTSLLTAC---GTHKNAGLVTVIAEKLLKGFPDDPSVYTSL 652
Query: 338 IDMYVKCGRLDMAWEVFEKMK 358
+ Y G D +V E K
Sbjct: 653 SNAYATLGMWDQLSKVREAAK 673
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 37/218 (16%)
Query: 298 LLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKM 357
L+ + L C V + +G I + V + I + + +I MYV L A +VF++M
Sbjct: 7 LIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEM 66
Query: 358 KVREVSTWNAMIGGLAIHGRAEDAMKLFTKM-NGEKRKPNGVTFVGVLNACAHAGMVERG 416
R + TW M+ G G+ A++L+ +M + E+ N + VL AC G ++ G
Sbjct: 67 SERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLG 126
Query: 417 L---------------GLFNSMKRVYE---------------IEPEMEHFGCVVDLLGRA 446
+ L NS+ +Y + P + ++ +A
Sbjct: 127 ILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKA 186
Query: 447 GLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELG 484
GL++EA MP +PNV W C I G V+ G
Sbjct: 187 GLMDEAVTLFHRMP-QPNVVSWN-----CLISGFVDKG 218
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 167/543 (30%), Positives = 269/543 (49%), Gaps = 55/543 (10%)
Query: 35 ILNKKCFHSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFN-NFTLATKVFDCIPR 93
IL+ + SL KQ H++++K F V L+ Y N + L + D R
Sbjct: 196 ILSMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVR 255
Query: 94 PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQF 153
V N+ + G + + +++ + KM+ + RP T+ ++ +C+ G Q
Sbjct: 256 DQV-TFNVVIDG-LAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAM---GHQV 310
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCG 213
H +K G + +A + MY+SF F A K+ + + D++ WN MI Y +
Sbjct: 311 HGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFE--SLEEKDLVTWNTMISSYNQAK 368
Query: 214 EVEAANEVFVNM------PDK-NVGSW-----------------------------NAMI 237
++A V+ M PD+ GS NA+I
Sbjct: 369 LGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALI 428
Query: 238 SGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIK--PS 295
S ++ G IE A LF+ ++ ISW+AII G+ E LE F + +++ P
Sbjct: 429 SAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPD 488
Query: 296 RHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFE 355
+ L ++L++C + SL G H++V R+ + ++G ALI+MY +CG + + EVF
Sbjct: 489 AYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFN 548
Query: 356 KMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGE-KRKPNGVTFVGVLNACAHAGMVE 414
+M ++V +WN++I + HG E+A+ + M E K P+ TF VL+AC+HAG+VE
Sbjct: 549 QMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVE 608
Query: 415 RGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKF--IESMPVKPNVAVWGALL 472
GL +FNSM + + ++HF C+VDLLGRAG ++EAE I + V VW AL
Sbjct: 609 EGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALF 668
Query: 473 NACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRK------LMK 526
+AC HG+++LG+ V +L++ E + Y LSNIYA AG W + R+ MK
Sbjct: 669 SACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMK 728
Query: 527 ERG 529
+RG
Sbjct: 729 QRG 731
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 157/335 (46%), Gaps = 45/335 (13%)
Query: 100 NIYLKGSIENGEPHKAISCY---HKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAF 156
N L G +GE A+ + H+ L RP++++ G Q H +
Sbjct: 25 NRRLTGLTRSGENRNALKLFADVHRCTTL--RPDQYSVSLAITTARHLRDTIFGGQVHCY 82
Query: 157 VVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVE 216
++ GL H+ + + +Y G +K DE
Sbjct: 83 AIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDE------------------------- 117
Query: 217 AANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEIS-WSAIIDGYIKQR 275
++ PD V SW ++S + G IE A +FD+M ERD+++ W+A+I G +
Sbjct: 118 ------IDEPD--VYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESG 169
Query: 276 CFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGT 335
+ ++E+F +M + ++ + ++L++C + GSLD G+ +HS V + + + +
Sbjct: 170 YHETSVELFREMHKLGVRHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVN 228
Query: 336 ALIDMYVKCGRLDMAWEVFEK--MKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKR 393
ALI MY C + A VFE+ + VR+ T+N +I GLA R ++++ +F KM
Sbjct: 229 ALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKR-DESLLVFRKMLEASL 287
Query: 394 KPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYE 428
+P +TFV V+ +C+ A M + GL ++K YE
Sbjct: 288 RPTDLTFVSVMGSCSCAAMGHQVHGL--AIKTGYE 320
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 153/494 (30%), Positives = 247/494 (50%), Gaps = 37/494 (7%)
Query: 47 LKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGS 106
L+ A ++ + DH +S L+ YAN N + +FD V + N + G
Sbjct: 238 LRMASYMLEQIREPDDHSLSA-LISGYANCGRVNESRG--LFDRKSNRCVILWNSMISGY 294
Query: 107 IENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDV 166
I N +A+ +++M +R + T + AC G ++ G Q H K GL D+
Sbjct: 295 IANNMKMEALVLFNEMRN-ETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDI 353
Query: 167 HIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMP 226
+ S + MY+ KCG A ++F +
Sbjct: 354 VVASTLLDMYS---------------------------------KCGSPMEACKLFSEVE 380
Query: 227 DKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQ 286
+ N+MI CG I++A+ +F+ + + ISW+++ +G+ + C E LE FHQ
Sbjct: 381 SYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQ 440
Query: 287 MQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGR 346
M + + L S+++ CA++ SL+ G + + + D V+ ++LID+Y KCG
Sbjct: 441 MHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGF 500
Query: 347 LDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNA 406
++ VF+ M + WN+MI G A +G+ +A+ LF KM+ +P +TF+ VL A
Sbjct: 501 VEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTA 560
Query: 407 CAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVA 466
C + G+VE G LF SMK + P+ EHF C+VDLL RAG VEEA +E MP + +
Sbjct: 561 CNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGS 620
Query: 467 VWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMK 526
+W ++L C +G +G++ ++++EP NS Y LS I+A +G W+ A VRKLM+
Sbjct: 621 MWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMR 680
Query: 527 ERGIETVPGSSMMD 540
E + PGSS D
Sbjct: 681 ENNVTKNPGSSWTD 694
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 194/402 (48%), Gaps = 14/402 (3%)
Query: 81 FTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKA 140
++A ++F+ +P +V N L G I NG +A+ + + LN + T T+ KA
Sbjct: 140 LSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKE---LNFSADAITLTTVLKA 196
Query: 141 CAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVI 200
CA ++K G Q HA ++ G+ D + S+ + +YA G R A ML++ + D
Sbjct: 197 CAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQ--IREPDDH 254
Query: 201 CWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEM---G 257
+A+I GY CG V + +F ++ V WN+MISG M A LF+EM
Sbjct: 255 SLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNET 314
Query: 258 ERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRW 317
D + +A+I+ I + ++ + + + ++L + + GS +
Sbjct: 315 REDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACK 374
Query: 318 IHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGR 377
+ S VE D +L ++I +Y CGR+D A VFE+++ + + +WN+M G + +G
Sbjct: 375 LFSEVE----SYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGC 430
Query: 378 AEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFG 437
+ ++ F +M+ + V+ V++ACA +E G +F + + ++ +
Sbjct: 431 TVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVF-ARATIVGLDSDQVVSS 489
Query: 438 CVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHG 479
++DL + G VE + ++M VK + W ++++ +G
Sbjct: 490 SLIDLYCKCGFVEHGRRVFDTM-VKSDEVPWNSMISGYATNG 530
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 193/429 (44%), Gaps = 74/429 (17%)
Query: 134 YPTLFKACAVTGSVKEGVQFHAFVVKQG-LTGDVHIKSAGIQMYASFGLFREARKMLDES 192
Y L ++C+ Q + ++K+G L+ V + + +QMY+ G AR + DE
Sbjct: 29 YVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDE- 87
Query: 193 GKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTL 252
+ WN MI+GY+ GE + F MP+++ SWN ++SG A+ G + AR L
Sbjct: 88 -MPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRL 146
Query: 253 FDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSL 312
F+ M E+D ++ ++++ GYI +EAL +F ++ L ++L CA + +L
Sbjct: 147 FNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELN---FSADAITLTTVLKACAELEAL 203
Query: 313 DQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKV------------- 359
G+ IH+ + ++ D+ + ++L+++Y KCG L MA + E+++
Sbjct: 204 KCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGY 263
Query: 360 ------------------REVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFV 401
R V WN+MI G + +A+ LF +M E R+ + T
Sbjct: 264 ANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETRE-DSRTLA 322
Query: 402 GVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPV 461
V+NAC G +E G ++ FG + D++ + L++ K
Sbjct: 323 AVINACIGLGFLETG----------KQMHCHACKFGLIDDIVVASTLLDMYSK------- 365
Query: 462 KPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARV 521
G+ + AC++ VE + ILL+ + +Y GR DD RV
Sbjct: 366 ------CGSPMEACKLFSEVESYDT---ILLNS----------MIKVYFSCGRIDDAKRV 406
Query: 522 RKLMKERGI 530
+ ++ + +
Sbjct: 407 FERIENKSL 415
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 251 bits (642), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 164/574 (28%), Positives = 287/574 (50%), Gaps = 55/574 (9%)
Query: 49 QAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIE 108
Q + ++KT D V + + Y+ +F A +VFD + ++ N L G +
Sbjct: 195 QLQSTVVKTGLESDLVVGNSFITMYSRSG--SFRGARRVFDEMSFKDMISWNSLLSGLSQ 252
Query: 109 NGE-PHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVH 167
G +A+ + MM + ++ ++ C +K Q H +K+G +
Sbjct: 253 EGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLE 312
Query: 168 IKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMI----------------DGY-- 209
+ + + Y+ G+ + + + ++ +V+ W MI DG
Sbjct: 313 VGNILMSRYSKCGVLEAVKSVFHQ--MSERNVVSWTTMISSNKDDAVSIFLNMRFDGVYP 370
Query: 210 -----------LKCGE-VEAANEV--------FVNMPDKNVGSWNAMISGLARCGMIENA 249
+KC E ++ ++ FV+ P +VG N+ I+ A+ +E+A
Sbjct: 371 NEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEP--SVG--NSFITLYAKFEALEDA 426
Query: 250 RTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANV 309
+ F+++ R+ ISW+A+I G+ + EAL++F E + P+ + S+L A
Sbjct: 427 KKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFA 485
Query: 310 G--SLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNA 367
S+ QG+ H+ + + + V+ +AL+DMY K G +D + +VF +M + W +
Sbjct: 486 EDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTS 545
Query: 368 MIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVY 427
+I + HG E M LF KM E P+ VTF+ VL AC GMV++G +FN M VY
Sbjct: 546 IISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVY 605
Query: 428 EIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERV 487
+EP EH+ C+VD+LGRAG ++EAE+ + +P P ++ ++L +CR+HGNV++G +V
Sbjct: 606 NLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKV 665
Query: 488 GWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGG---- 543
+ ++M+P SG Y + NIYA+ WD A +RK M+++ + G S +D+G
Sbjct: 666 AELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGS 725
Query: 544 -KVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEG 576
+ F GD SHP+ EIY M+E + ++ +EG
Sbjct: 726 LTMQGFSSGDKSHPKSDEIYRMVEIIGLEMNLEG 759
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 147/633 (23%), Positives = 252/633 (39%), Gaps = 139/633 (21%)
Query: 38 KKCFHSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVF 97
K C L+ Q H + VS ++ Y F A +F+ + P+V
Sbjct: 86 KACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAG--RFDNALCIFENLVDPDVV 143
Query: 98 VCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFV 157
N L G +N A++ +M + FTY T C + G+Q + V
Sbjct: 144 SWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTV 200
Query: 158 VKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVE- 216
VK GL D+ + ++ I MY+ G FR AR++ DE + D+I WN+++ G + G
Sbjct: 201 VKTGLESDLVVGNSFITMYSRSGSFRGARRVFDE--MSFKDMISWNSLLSGLSQEGTFGF 258
Query: 217 AANEVFVNMPDKNV---------------------------------------GSWNAMI 237
A +F +M + V N ++
Sbjct: 259 EAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILM 318
Query: 238 SGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRH 297
S ++CG++E +++F +M ER+ +SW+ +I +A+ +F M+ + + P+
Sbjct: 319 SRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNK-----DDAVSIFLNMRFDGVYPNEV 373
Query: 298 LLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKM 357
++ + +G IH + + +G + I +Y K L+ A + FE +
Sbjct: 374 TFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDI 433
Query: 358 KVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACA--------- 408
RE+ +WNAMI G A +G + +A+K+F E PN TF VLNA A
Sbjct: 434 TFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQ 492
Query: 409 ----HAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMP---- 460
HA +++ GL NS V ++D+ + G ++E+EK M
Sbjct: 493 GQRCHAHLLKLGL---NSCPVVSS---------ALLDMYAKRGNIDESEKVFNEMSQKNQ 540
Query: 461 ------------------------------VKPNVAVWGALLNACRIHGNVELGERVGWI 490
V P++ + ++L AC G V+ G + +
Sbjct: 541 FVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNM 600
Query: 491 LLD---MEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMD------- 540
+++ +EP + Y+ + ++ +AGR + +LM E + PG SM+
Sbjct: 601 MIEVYNLEPSHE-HYSCMVDMLGRAGR---LKEAEELMSE--VPGGPGESMLQSMLGSCR 654
Query: 541 ------MGGKVHEFKMG-----DSSHPQMKEIY 562
MG KV E M S+ QM IY
Sbjct: 655 LHGNVKMGAKVAELAMEMKPELSGSYVQMYNIY 687
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 152/498 (30%), Positives = 259/498 (52%), Gaps = 44/498 (8%)
Query: 49 QAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIE 108
Q H + +K+ + +V +L+ Y+ + LA ++F+ +P +V N ++ G +E
Sbjct: 150 QLHCLAMKSGFEMEVYVGTSLVSMYSR--CGEWVLAARMFEKVPHKSVVTYNAFISGLME 207
Query: 109 NGEPHKAISCYHKMMVLNSR-PNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVH 167
NG + S ++ M +S PN T+ ACA +++ G Q H V+K+
Sbjct: 208 NGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKK------- 260
Query: 168 IKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPD 227
+ Q + + A+ID Y KC ++A VF + D
Sbjct: 261 --------------------------EFQFETMVGTALIDMYSKCRCWKSAYIVFTELKD 294
Query: 228 -KNVGSWNAMISGLARCGMIENARTLFDEMGER----DEISWSAIIDGYIKQRCFKEALE 282
+N+ SWN++ISG+ G E A LF+++ D +W+++I G+ + EA +
Sbjct: 295 TRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFK 354
Query: 283 VFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYV 342
F +M + PS L S+L+ C+++ +L G+ IH V + + + D + T+LIDMY+
Sbjct: 355 FFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYM 414
Query: 343 KCGRLDMAWEVFEKM--KVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTF 400
KCG A +F++ K ++ WN MI G HG E A+++F + EK +P+ TF
Sbjct: 415 KCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATF 474
Query: 401 VGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMP 460
VL+AC+H G VE+G +F M+ Y +P EH GC++DLLGR+G + EA++ I+ M
Sbjct: 475 TAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMS 534
Query: 461 VKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVAR 520
+ +LL +CR H + LGE L ++EP N + +LS+IYA RW+DV
Sbjct: 535 EPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVES 593
Query: 521 VRKLMKERGIETVPGSSM 538
+R+++ ++ + +PG S+
Sbjct: 594 IRQVIDQKQLVKLPGLSL 611
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 111/453 (24%), Positives = 210/453 (46%), Gaps = 51/453 (11%)
Query: 123 MVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLF 182
++L+ PNKFT+P L K+CA G V +G HA VVK G DV +A + MY
Sbjct: 23 VILSHSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQV 82
Query: 183 REARKMLDESGKTQTDVICWNAMIDGYLK------------------------------- 211
+A K+LDE + + NA + G L+
Sbjct: 83 TDALKVLDE--MPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLG 140
Query: 212 -CGEVEAANEV----FVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSA 266
CG++E ++ + + V +++S +RCG A +F+++ + ++++A
Sbjct: 141 GCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNA 200
Query: 267 IIDGYIKQRCFKEALEVFHQMQR-EKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERN 325
I G ++ VF+ M++ +P+ + +T CA++ +L GR +H V +
Sbjct: 201 FISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKK 260
Query: 326 SIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMK-VREVSTWNAMIGGLAIHGRAEDAMKL 384
Q + ++GTALIDMY KC A+ VF ++K R + +WN++I G+ I+G+ E A++L
Sbjct: 261 EFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVEL 320
Query: 385 FTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLG 444
F K++ E KP+ T+ +++ + G V F M V + P ++ C+ LL
Sbjct: 321 FEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMV-PSLK---CLTSLLS 376
Query: 445 RAGLV------EEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRN 498
+ +E + + ++ V +L++ G R+ + + +P++
Sbjct: 377 ACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRI-FDRFEPKPKD 435
Query: 499 SGRYALLSNIYAKAGRWDDVARVRKLMKERGIE 531
+ ++ + Y K G + + +L++E +E
Sbjct: 436 PVFWNVMISGYGKHGECESAIEIFELLREEKVE 468
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 139/313 (44%), Gaps = 31/313 (9%)
Query: 294 PSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEV 353
P++ P +L CA +G + QGR +H+ V + VD TAL+ MY+K ++ A +V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 354 FEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMV 413
++M R +++ NA + GL +G DA ++F N VT VL C G +
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDI 145
Query: 414 ERGLGLFN-SMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALL 472
E G+ L +MK +E+E + +V + R G A + E +P K +V + A +
Sbjct: 146 EGGMQLHCLAMKSGFEMEVYVGT--SLVSMYSRCGEWVLAARMFEKVPHK-SVVTYNAFI 202
Query: 473 NACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKL-----MKE 527
+ +G + L V ++ ++ I A A ++ R+L KE
Sbjct: 203 SGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLL-NLQYGRQLHGLVMKKE 261
Query: 528 RGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLE------------------KMM 569
ET+ G++++DM K +K ++K+ ++ ++
Sbjct: 262 FQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELF 321
Query: 570 DKLQIEGYSPNTS 582
+KL EG P+++
Sbjct: 322 EKLDSEGLKPDSA 334
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 124/302 (41%), Gaps = 43/302 (14%)
Query: 43 SLQHLKQAHAIILKTAHFHDHFVSGTLLKCYA-----NPNFNNFT--------------- 82
+LQ+ +Q H +++K + V L+ Y+ + FT
Sbjct: 246 NLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVI 305
Query: 83 ----------LATKVFDCIP----RPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSR 128
A ++F+ + +P+ N + G + G+ +A + +M+ +
Sbjct: 306 SGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMV 365
Query: 129 PNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKM 188
P+ +L AC+ ++K G + H V+K D+ + ++ I MY GL AR++
Sbjct: 366 PSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRI 425
Query: 189 LDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNV----GSWNAMISGLARCG 244
D D + WN MI GY K GE E+A E+F + ++ V ++ A++S + CG
Sbjct: 426 FDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCG 485
Query: 245 MIENARTLFDEMGERDEISWSA-----IIDGYIKQRCFKEALEVFHQMQREKIKPSRHLL 299
+E +F M E S +ID + +EA EV QM LL
Sbjct: 486 NVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVYSSLL 545
Query: 300 PS 301
S
Sbjct: 546 GS 547
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 132/370 (35%), Positives = 202/370 (54%), Gaps = 11/370 (2%)
Query: 299 LPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMK 358
L + +C L + + +H + + +D L++MY CG + A VFEKM
Sbjct: 257 LLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMS 316
Query: 359 VREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLG 418
+ + TW +I A +G EDA+ +F++ E P+G F G+ AC G V+ GL
Sbjct: 317 EKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLL 376
Query: 419 LFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIH 478
F SM R Y I P +E + +V++ G ++EA +F+E MP++PNV VW L+N R+H
Sbjct: 377 HFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVH 436
Query: 479 GNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSM 538
GN+ELG+ ++ ++P + + I KA DV + L K GI SSM
Sbjct: 437 GNLELGDYCAEVVEFLDPTRLNKQSREGFIPVKAS---DVEK-ESLKKRSGILHGVKSSM 492
Query: 539 MDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKETVLK 598
EF+ GD++ P+ E++ +L + + GY T M +DI++E KET+L
Sbjct: 493 -------QEFRAGDTNLPENDELFQLLRNLKMHMVEVGYVAETRMALHDIDQESKETLLL 545
Query: 599 QHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFK 658
HSE+IA A +L++ P ++KNLRVC DCH+A K++S I G +I RD R+H K
Sbjct: 546 GHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMK 605
Query: 659 NGMCSCKDFW 668
NG C+CKD+W
Sbjct: 606 NGACTCKDYW 615
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 81/177 (45%), Gaps = 9/177 (5%)
Query: 212 CGEVEAANE-------VFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISW 264
CGE E E + ++ ++ S + ++ + CG+ A ++F++M E++ +W
Sbjct: 264 CGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETW 323
Query: 265 SAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVER 324
II + K ++A+++F + + E P L + C +G +D+G + R
Sbjct: 324 CIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSR 383
Query: 325 N-SIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR-EVSTWNAMIGGLAIHGRAE 379
+ I +L++MY G LD A E E+M + V W ++ +HG E
Sbjct: 384 DYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLE 440
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 246 bits (628), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 153/534 (28%), Positives = 260/534 (48%), Gaps = 58/534 (10%)
Query: 43 SLQHL---KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVC 99
SL HL KQ H ++K ++ F+ LL+ Y F A K+FD +P N+
Sbjct: 48 SLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTK--IREFDDADKLFDEMPLRNIVTW 105
Query: 100 NIYLKGSIE-----NGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFH 154
NI + G I+ N H +++ + + ++ L + C + ++K G+Q H
Sbjct: 106 NILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLH 165
Query: 155 AFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGE 214
+VKQGL ++ + Y GL EAR++ + D++ WNA++ Y+ G
Sbjct: 166 CLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFE--AVLDRDLVLWNALVSSYVLNGM 223
Query: 215 VEAANEVFVNM-PDKN------------------------------------VGSWNAMI 237
++ A + M DKN + A++
Sbjct: 224 IDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQGKQIHAILFKVSYQFDIPVATALL 283
Query: 238 SGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRH 297
+ A+ + +AR F+ M R+ +SW+A+I G+ + +EA+ +F QM E ++P
Sbjct: 284 NMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDEL 343
Query: 298 LLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKM 357
S+L+ CA ++ + + + + V + + +LI Y + G L A F +
Sbjct: 344 TFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSI 403
Query: 358 KVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGL 417
+ ++ +W ++IG LA HG AE+++++F M +K +P+ +TF+ VL+AC+H G+V+ GL
Sbjct: 404 REPDLVSWTSVIGALASHGFAEESLQMFESM-LQKLQPDKITFLEVLSACSHGGLVQEGL 462
Query: 418 GLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRI 477
F M Y+IE E EH+ C++DLLGRAG ++EA + SMP +P+ A C I
Sbjct: 463 RCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNI 522
Query: 478 HGNVELGERVGW---ILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKER 528
H E E + W LL++EP Y++LSN Y G W+ A +RK +ER
Sbjct: 523 H---EKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRK--RER 571
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 245 bits (625), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 126/336 (37%), Positives = 192/336 (57%), Gaps = 2/336 (0%)
Query: 204 AMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGER-DEI 262
A++D Y KC V A ++F +P +N WNAMIS CG ++ A L++ M +E
Sbjct: 88 ALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNES 147
Query: 263 SWSAIIDGYI-KQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSF 321
S++AII G + + A+E + +M + KP+ L ++++ C+ +G+ + IHS+
Sbjct: 148 SFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSY 207
Query: 322 VERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDA 381
RN I+ L + L++ Y +CG + VF+ M+ R+V W+++I A+HG AE A
Sbjct: 208 AFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESA 267
Query: 382 MKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVD 441
+K F +M K P+ + F+ VL AC+HAG+ + L F M+ Y + +H+ C+VD
Sbjct: 268 LKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVD 327
Query: 442 LLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGR 501
+L R G EEA K I++MP KP WGALL ACR +G +EL E LL +EP N
Sbjct: 328 VLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPAN 387
Query: 502 YALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSS 537
Y LL IY GR ++ R+R MKE G++ PGSS
Sbjct: 388 YVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 113/261 (43%), Gaps = 48/261 (18%)
Query: 262 ISWSAIIDGYIKQRCFKEALEVFHQMQREKIKP-SRHLLPSMLTVCANVGSLDQGRWIHS 320
IS + + Y Q ++AL +F QM P H+ L CA G +H+
Sbjct: 13 ISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHA 72
Query: 321 FVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAED 380
+++ + +G AL+DMY KC + A ++F+++ R WNAMI G+ ++
Sbjct: 73 HSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKE 132
Query: 381 AMKLFTKM--------------------NGEKR-------------KPNGVTFVGVLNAC 407
A++L+ M +G R KPN +T + +++AC
Sbjct: 133 AVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSAC 192
Query: 408 AHAGMVERGLGLFNSMKRVYE------IEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPV 461
+ +G F +K ++ IEP + +V+ GR G + + +SM
Sbjct: 193 S-------AIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMED 245
Query: 462 KPNVAVWGALLNACRIHGNVE 482
+ +V W +L++A +HG+ E
Sbjct: 246 R-DVVAWSSLISAYALHGDAE 265
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 147/342 (42%), Gaps = 53/342 (15%)
Query: 51 HAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENG 110
HA +K+ + FV LL Y + + A K+FD IP+ N V N + G
Sbjct: 71 HAHSVKSNFLSNPFVGCALLDMYGK--CLSVSHARKLFDEIPQRNAVVWNAMISHYTHCG 128
Query: 111 EPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVT--GSVKEGVQFHAFVVKQGLTGDVHI 168
+ +A+ Y M V+ PN+ ++ + K T GS + ++F+ +++ ++
Sbjct: 129 KVKEAVELYEAMDVM---PNESSFNAIIKGLVGTEDGSYR-AIEFYRKMIEFRFKPNLIT 184
Query: 169 KSAGIQMYASFGLFREARKMLDESGKT--QTDVICWNAMIDGYLKCGEVEAANEVFVNMP 226
A + ++ G FR +++ + + + + +++ Y +CG + VF +M
Sbjct: 185 LLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSME 244
Query: 227 DKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQ 286
D++V +W+++IS A G E+ AL+ F +
Sbjct: 245 DRDVVAWSSLISAYALHGDAES-------------------------------ALKTFQE 273
Query: 287 MQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTA------LIDM 340
M+ K+ P ++L C++ G D+ + V +Q D L + L+D+
Sbjct: 274 MELAKVTPDDIAFLNVLKACSHAGLADE-----ALVYFKRMQGDYGLRASKDHYSCLVDV 328
Query: 341 YVKCGRLDMAWEVFEKMKVREVS-TWNAMIGGLAIHGRAEDA 381
+ GR + A++V + M + + TW A++G +G E A
Sbjct: 329 LSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELA 370
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 129/347 (37%), Positives = 200/347 (57%), Gaps = 5/347 (1%)
Query: 196 QTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDE 255
++ V A++ YL G + A++VF MP++N +WN MI+GL G E A ++
Sbjct: 155 ESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEK 214
Query: 256 MGERDEISWSAIIDGYIKQRCFKEALEVFHQMQR-EKIKPSRHLLPSMLTVCANVGSLDQ 314
M R +SW+ IIDGY + KEA+ +F +M + IKP+ + ++L N+G L
Sbjct: 215 MPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKM 274
Query: 315 GRWIHSFV-ERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMK--VREVSTWNAMIGG 371
+H++V +R + D + +LID Y KCG + A++ F ++ + + +W MI
Sbjct: 275 CGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISA 334
Query: 372 LAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERG-LGLFNSMKRVYEIE 430
AIHG ++A+ +F M KPN VT + VLNAC+H G+ E L FN+M Y+I
Sbjct: 335 FAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKIT 394
Query: 431 PEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWI 490
P+++H+GC+VD+L R G +EEAEK +P++ VW LL AC ++ + EL ERV
Sbjct: 395 PDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRK 454
Query: 491 LLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSS 537
L+++E + G Y L+SNI+ GR+ D R RK M RG+ +PG S
Sbjct: 455 LMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHS 501
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 134/327 (40%), Gaps = 69/327 (21%)
Query: 77 NFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNS-RPNKFTYP 135
N +F A + +P V + G +P +AI + +M+ ++ +PN+ T
Sbjct: 201 NLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITIL 260
Query: 136 TLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKT 195
+ A G +K HA+V K+G
Sbjct: 261 AILPAVWNLGDLKMCGSVHAYVGKRGFV-------------------------------- 288
Query: 196 QTDVICWNAMIDGYLKCGEVEAANEVFVNMPD--KNVGSWNAMISGLARCGMIENARTLF 253
D+ N++ID Y KCG +++A + F+ +P+ KN+ SW MIS A GM
Sbjct: 289 PCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGM-------- 340
Query: 254 DEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLD 313
KEA+ +F M+R +KP+R + S+L C++ G +
Sbjct: 341 -----------------------GKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAE 377
Query: 314 QG--RWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVS-TWNAMIG 370
+ + ++ V I D L+DM + GRL+ A ++ ++ + E + W ++G
Sbjct: 378 EEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLG 437
Query: 371 GLAIHGRAEDAMKLFTKMNGEKRKPNG 397
+++ AE A ++ K+ +R G
Sbjct: 438 ACSVYDDAELAERVTRKLMELERSHGG 464
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 125/315 (39%), Positives = 193/315 (61%), Gaps = 16/315 (5%)
Query: 241 ARCGMIENARTLFDEMGERDEISWSAIIDGYIKQR-----CFKEALEVFHQMQ--REKIK 293
A+ G + AR +FDEM ER ++W+A+I GY + ++A+ +F + ++
Sbjct: 158 AKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVR 217
Query: 294 PSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSI--QVDAVLGTALIDMYVKCGRLDMAW 351
P+ + +L+ + G L+ G +H ++E+ +VD +GTAL+DMY KCG L+ A+
Sbjct: 218 PTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAF 277
Query: 352 EVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAG 411
VFE MKV+ V TW +M GLA++GR + L +M KPN +TF +L+A H G
Sbjct: 278 SVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIG 337
Query: 412 MVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGAL 471
+VE G+ LF SMK + + P +EH+GC+VDLLG+AG ++EA +FI +MP+KP+ + +L
Sbjct: 338 LVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSL 397
Query: 472 LNACRIHGNVELGERVGWILLDMEPRN---SGR----YALLSNIYAKAGRWDDVARVRKL 524
NAC I+G +GE +G LL++E + SG Y LSN+ A G+W +V ++RK
Sbjct: 398 CNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKE 457
Query: 525 MKERGIETVPGSSMM 539
MKER I+T PG S +
Sbjct: 458 MKERRIKTRPGYSFV 472
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 89/178 (50%), Gaps = 12/178 (6%)
Query: 312 LDQGRWIHSFVERNSIQVDA-VLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIG 370
L GR +H V++ ++ ++GT L+ Y K G L A +VF++M R TWNAMIG
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 371 GLAIHG-----RAEDAMKLFTKMN--GEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSM 423
G H A AM LF + + G +P T V VL+A + G++E G + +
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI 246
Query: 424 KRVYEIEPEMEHF--GCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHG 479
+++ PE++ F +VD+ + G + A E M VK NV W ++ ++G
Sbjct: 247 EKL-GFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVK-NVFTWTSMATGLALNG 302
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 145/376 (38%), Gaps = 60/376 (15%)
Query: 50 AHAIILKTAHFHD-HFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIE 108
H ++ K ++ + TLL YA + A KVFD +P N + G
Sbjct: 133 VHGMVKKLGFLYESELIGTTLLHFYAKNG--DLRYARKVFDEMPERTSVTWNAMIGGYCS 190
Query: 109 -----NGEPHKAISCYHKMMVLNS--RPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQG 161
N KA+ + + S RP T + A + TG ++ G H ++ K G
Sbjct: 191 HKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLG 250
Query: 162 LTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEV 221
T +V DV A++D Y KCG + A V
Sbjct: 251 FTPEV-------------------------------DVFIGTALVDMYSKCGCLNNAFSV 279
Query: 222 FVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGER----DEISWSAIIDGYIKQRCF 277
F M KNV +W +M +GLA G L + M E +EI++++++ Y
Sbjct: 280 FELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLV 339
Query: 278 KEALEVFHQMQ-REKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTA 336
+E +E+F M+ R + P ++ + G + + + F+ I+ DA+L +
Sbjct: 340 EEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEA---YQFILAMPIKPDAILLRS 396
Query: 337 LIDMYVKCGRLDMAWEVF----------EKMKVREVSTWNAMIGGLAIHGRAEDAMKLFT 386
L + G M E+ EK+ E + A+ LA G+ + KL
Sbjct: 397 LCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRK 456
Query: 387 KMNGEKRKPN-GVTFV 401
+M + K G +FV
Sbjct: 457 EMKERRIKTRPGYSFV 472
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 91/435 (20%), Positives = 166/435 (38%), Gaps = 74/435 (17%)
Query: 43 SLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPR---PNVFVC 99
+L KQ HA ++ HD+ + G L+ Y + + PR P+ F+
Sbjct: 20 TLIQAKQIHAQLVING-CHDNSLFGKLIGHYCSKPSTESSSKLAHLLVFPRFGHPDKFLF 78
Query: 100 NIYLKGSIENGEPHKAISCY------HKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQF 153
N LK S +P +I + ++ LN R F ++ A + +++ G
Sbjct: 79 NTLLKCS----KPEDSIRIFANYASKSSLLYLNERTFVFVLGACARS-ASSSALRVGRIV 133
Query: 154 HAFVVKQGLTGDVH-IKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLK- 211
H V K G + I + + YA G R ARK+ DE + + + WNAMI GY
Sbjct: 134 HGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTS--VTWNAMIGGYCSH 191
Query: 212 --------------------CGE---------------------------VEAANEVFVN 224
CG V E
Sbjct: 192 KDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGF 251
Query: 225 MPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVF 284
P+ +V A++ ++CG + NA ++F+ M ++ +W+++ G E +
Sbjct: 252 TPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLL 311
Query: 285 HQMQREKIKPSRHLLPSMLTVCANVGSLDQG-RWIHSFVERNSIQVDAVLGTALIDMYVK 343
++M IKP+ S+L+ ++G +++G S R + ++D+ K
Sbjct: 312 NRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGK 371
Query: 344 CGRLDMAWEVFEKMKVR-EVSTWNAMIGGLAIHGR---AEDAMKLFTKMNGEKRKPNGV- 398
GR+ A++ M ++ + ++ +I+G E+ K ++ E K +G
Sbjct: 372 AGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSE 431
Query: 399 --TFVGVLNACAHAG 411
+V + N AH G
Sbjct: 432 CEDYVALSNVLAHKG 446
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 122/335 (36%), Positives = 207/335 (61%), Gaps = 13/335 (3%)
Query: 234 NAMISGLARCGMIENARTLFDEMGERDEIS-WSAIIDGYIKQRCFKEALEVFHQMQREKI 292
+++ + G ++ AR +FDE E+ I W+A+I Y + EA+E+F +M+ EKI
Sbjct: 104 TSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKI 163
Query: 293 KPSRHLLPSMLTVCANVGSLDQGRWIHS--FVERNSIQVDAVLGTALIDMYVKCGRLDMA 350
+ ++ L+ CA++G++ G I+S + + +D L +L++MYVK G + A
Sbjct: 164 ELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKA 223
Query: 351 WEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRK------PNGVTFVGVL 404
++F++ ++V+T+ +MI G A++G+A+++++LF KM + PN VTF+GVL
Sbjct: 224 RKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVL 283
Query: 405 NACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPN 464
AC+H+G+VE G F SM Y ++P HFGC+VDL R+G +++A +FI MP+KPN
Sbjct: 284 MACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPN 343
Query: 465 VAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKL 524
+W LL AC +HGNVELGE V + +++ + G Y LSNIYA G WD+ +++R
Sbjct: 344 TVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDR 403
Query: 525 MKERGIETVPGSSMMDMGGKVHEFKMG-DSSHPQM 558
+++R +PG S +++G ++EF G D++ Q+
Sbjct: 404 VRKR---RMPGKSWIELGSIINEFVSGPDNNDEQL 435
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 157/364 (43%), Gaps = 53/364 (14%)
Query: 100 NIYLKGSIENGEPHKAISCY-HKMMVLNSRPNKFTYPTLFK-ACAVTGSVKEGVQFHAFV 157
N LK +E+GEP KA+ + H+ S + F+ K + A S +G Q HA V
Sbjct: 32 NHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALV 91
Query: 158 VKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLK------ 211
K G + I+++ + Y+S G AR++ DE+ + Q +++ W AMI Y +
Sbjct: 92 RKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQ-NIVLWTAMISAYTENENSVE 150
Query: 212 -----------------------------CGEVEAANEVFVNMPDK------NVGSWNAM 236
G V+ E++ + ++ N++
Sbjct: 151 AIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSL 210
Query: 237 ISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQM------QRE 290
++ + G E AR LFDE +D +++++I GY +E+LE+F +M Q
Sbjct: 211 LNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDT 270
Query: 291 KIKPSRHLLPSMLTVCANVGSLDQG-RWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDM 349
I P+ +L C++ G +++G R S + +++ ++D++ + G L
Sbjct: 271 VITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKD 330
Query: 350 AWEVFEKMKVR-EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACA 408
A E +M ++ W ++G ++HG E ++ ++ R G +V + N A
Sbjct: 331 AHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVG-DYVALSNIYA 389
Query: 409 HAGM 412
GM
Sbjct: 390 SKGM 393
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 152/525 (28%), Positives = 260/525 (49%), Gaps = 13/525 (2%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFD--CIPRPNVFVCNIYLKG 105
+Q H +++KT + F +L+ Y+ F +F+ C+ + N +
Sbjct: 145 EQLHGVLVKTGNDGTKFAVSSLIHMYSKCG--KFKEVCNIFNGSCVEFVDSVARNAMIAA 202
Query: 106 SIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGD 165
G+ KA+S + + LN + ++ TL A G +E ++ + + GL D
Sbjct: 203 YCREGDIDKALSVFWRNPELN---DTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWD 259
Query: 166 VHIKSAGIQMYASFG---LFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVF 222
H A + + +S + +E + ++G + + ++D Y KCG ++ A
Sbjct: 260 EHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVS-SGIVDVYCKCGNMKYAESAH 318
Query: 223 VNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALE 282
+ N+ S ++MI G + G + A+ LFD + E++ + W+A+ GY+ R LE
Sbjct: 319 LLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLE 378
Query: 283 VFHQ-MQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMY 341
+ + E P ++ S+L C+ ++ G+ IH R I +D L TA +DMY
Sbjct: 379 LARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMY 438
Query: 342 VKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFV 401
KCG ++ A +F+ R+ +NAMI G A HG + + F M KP+ +TF+
Sbjct: 439 SKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFM 498
Query: 402 GVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESM-P 460
+L+AC H G+V G F SM Y I PE H+ C++DL G+A +++A + +E +
Sbjct: 499 ALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQ 558
Query: 461 VKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVAR 520
V+ + + GA LNAC + N EL + V LL +E N RY ++N YA +GRWD++ R
Sbjct: 559 VEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQR 618
Query: 521 VRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLML 565
+R M+ + +E G S ++ + H F D SH + + IY ML
Sbjct: 619 IRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAML 663
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 120/518 (23%), Positives = 202/518 (38%), Gaps = 108/518 (20%)
Query: 74 ANPNFNNFTLATKVFDCIP-RPNVFVCNIYLKG-SIENGEPHKAISCY---HKMMVLNSR 128
A FNN A ++F+ ++ N L G + +G +AI + H+ +
Sbjct: 63 AYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIW 122
Query: 129 PNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKM 188
+ FT T+ K A +V G Q H +VK G G S+ I MY+ G F+E +
Sbjct: 123 IDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNI 182
Query: 189 LDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKN-VGSWNAMISGLARCGMIE 247
+ S D + NAMI Y + G+++ A VF P+ N SWN +I+G A+ G E
Sbjct: 183 FNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEE 242
Query: 248 NARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCA 307
EAL++ M+ +K H ++L V +
Sbjct: 243 -------------------------------EALKMAVSMEENGLKWDEHSFGAVLNVLS 271
Query: 308 NVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNA 367
++ SL G+ +H+ V +N + + + ++D+Y KCG + A + + ++
Sbjct: 272 SLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASS 331
Query: 368 MIGGLAIHGRAEDAMKLFTKMN--------------------------------GEKRKP 395
MI G + G+ +A +LF ++ E P
Sbjct: 332 MIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTP 391
Query: 396 NGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKF 455
+ + V VL AC+ +E G + R I + + VD+ + G VE AE+
Sbjct: 392 DSLVMVSVLGACSLQAYMEPGKEIHGHSLRT-GILMDKKLVTAFVDMYSKCGNVEYAERI 450
Query: 456 IESM----------------------------------PVKPNVAVWGALLNACRIHGNV 481
+S KP+ + ALL+ACR G V
Sbjct: 451 FDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLV 510
Query: 482 ELGERVGWILLD---MEPRNSGRYALLSNIYAKAGRWD 516
GE+ +++ + P +G Y + ++Y KA R D
Sbjct: 511 LEGEKYFKSMIEAYNISPE-TGHYTCMIDLYGKAYRLD 547
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 118/254 (46%), Gaps = 40/254 (15%)
Query: 191 ESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENAR 250
+SG T T + N +++ Y K G + A VF M ++NV SWNA+I+ + ++ AR
Sbjct: 16 KSGSTLT-AVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEAR 74
Query: 251 TLFD-EMGERDEISWSAIIDGYIKQR-CFKEALEVFHQMQR---EKIKPSRHLLPSMLTV 305
LF+ + ERD I+++ ++ G+ K C EA+E+F +M R + I + +M+ +
Sbjct: 75 ELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKL 134
Query: 306 CANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGR------------------- 346
A + ++ G +H + + ++LI MY KCG+
Sbjct: 135 SAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSV 194
Query: 347 --------------LDMAWEVFEKM-KVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGE 391
+D A VF + ++ + +WN +I G A +G E+A+K+ M
Sbjct: 195 ARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEEN 254
Query: 392 KRKPNGVTFVGVLN 405
K + +F VLN
Sbjct: 255 GLKWDEHSFGAVLN 268
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 235 bits (599), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 154/530 (29%), Positives = 263/530 (49%), Gaps = 44/530 (8%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSI 107
++ H+ + K+ D + + L + YA + + A K+FD P +VF+ N ++
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALND--DLISARKLFDVFPERSVFLWNSIIRAYA 82
Query: 108 ENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVH 167
+ + +S + +++ ++RP+ FTY L + + + K H + GL D
Sbjct: 83 KAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQI 142
Query: 168 IKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM-- 225
SA ++ Y+ GL EA K+ D+ WN MI GY CG + +F M
Sbjct: 143 CGSAIVKAYSKAGLIVEASKLF--CSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQH 200
Query: 226 -------------------PDKNVGSWN------------------AMISGLARCGMIEN 248
P + +W+ A+++ +RC I +
Sbjct: 201 RGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIAS 260
Query: 249 ARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCAN 308
A ++F+ + E D ++ S++I GY + KEAL +F +++ KP L+ +L CA
Sbjct: 261 ACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAE 320
Query: 309 VGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAM 368
+ G+ +HS+V R +++D + +ALIDMY KCG L A +F + + + ++N++
Sbjct: 321 LSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSL 380
Query: 369 IGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYE 428
I GL +HG A A + FT++ P+ +TF +L C H+G++ +G +F MK +
Sbjct: 381 ILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFG 440
Query: 429 IEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVG 488
IEP+ EH+ +V L+G AG +EEA +F+ S+ + + GALL+ C +H N L E V
Sbjct: 441 IEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVA 500
Query: 489 W-ILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSS 537
I + E R S +LSN+YA+ GRWD+V R+R + E +PG S
Sbjct: 501 ENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGIS 550
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 235 bits (599), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 147/503 (29%), Positives = 252/503 (50%), Gaps = 48/503 (9%)
Query: 62 DHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHK 121
D V+ +L+ Y+ +A ++F I +V + + + G+ +AIS +
Sbjct: 334 DVSVATSLMSMYSKCG--ELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRD 391
Query: 122 MMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGL 181
MM ++ +PN T ++ + CA + + G H + +K + ++ +A I MYA G
Sbjct: 392 MMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGR 451
Query: 182 FREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM------PDKNV----- 230
F A K + D + +NA+ GY + G+ A +V+ NM PD
Sbjct: 452 FSPALKAFER--LPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGML 509
Query: 231 -----------GSW-----------------NAMISGLARCGMIENARTLFDEMG-ERDE 261
GS +A+I+ +C + A LFD+ G E+
Sbjct: 510 QTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKST 569
Query: 262 ISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSF 321
+SW+ +++GY+ +EA+ F QM+ EK +P+ +++ A + +L G +HS
Sbjct: 570 VSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSS 629
Query: 322 VERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDA 381
+ + +G +L+DMY KCG ++ + + F ++ + + +WN M+ A HG A A
Sbjct: 630 LIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCA 689
Query: 382 MKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVD 441
+ LF M + KP+ V+F+ VL+AC HAG+VE G +F M ++IE E+EH+ C+VD
Sbjct: 690 VSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVD 749
Query: 442 LLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGR 501
LLG+AGL EA + + M VK +V VWGALLN+ R+H N+ L L+ +EP N
Sbjct: 750 LLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSH 809
Query: 502 YALLSNIYAKAGRWDDVARVRKL 524
Y+ + G ++V+R++K+
Sbjct: 810 YSQDRRL----GEVNNVSRIKKV 828
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 194/427 (45%), Gaps = 41/427 (9%)
Query: 78 FNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNS-RPNKFTYPT 136
F L+ +FD + P V + N ++G G +A+ + M P+K+++
Sbjct: 46 FQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTF 105
Query: 137 LFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQ 196
KACA + K+G++ H + + GL DV+I +A ++MY AR++ D+
Sbjct: 106 ALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDK--MHV 163
Query: 197 TDVICWNAMIDGYLKCGEVEAANEVFVNMPD-----KNVGSWN----------------- 234
DV+ WN M+ G + G AA +F +M +V +N
Sbjct: 164 KDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCL 223
Query: 235 -----------AMISGL----ARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKE 279
A SGL C + A ++F+E+ +DE SW ++ Y F+E
Sbjct: 224 HGLVIKKGFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEE 283
Query: 280 ALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALID 339
LE+F M+ ++ ++ S L A VG L +G IH + + + D + T+L+
Sbjct: 284 VLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMS 343
Query: 340 MYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVT 399
MY KCG L++A ++F ++ R+V +W+AMI G+ ++A+ LF M KPN VT
Sbjct: 344 MYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVT 403
Query: 400 FVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESM 459
VL CA G + + +IE E+E V+ + + G A K E +
Sbjct: 404 LTSVLQGCAGVAASRLGKSIHCYAIKA-DIESELETATAVISMYAKCGRFSPALKAFERL 462
Query: 460 PVKPNVA 466
P+K VA
Sbjct: 463 PIKDAVA 469
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 133/565 (23%), Positives = 242/565 (42%), Gaps = 89/565 (15%)
Query: 51 HAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENG 110
H +++K F F SG L+ Y N + A VF+ + R + + NG
Sbjct: 224 HGLVIKKG-FIFAFSSG-LIDMYCNCA--DLYAAESVFEEVWRKDESSWGTMMAAYAHNG 279
Query: 111 EPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKS 170
+ + + M + R NK + +A A G + +G+ H + V+QGL GDV + +
Sbjct: 280 FFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVAT 339
Query: 171 AGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM----- 225
+ + MY+ G A ++ DV+ W+AMI Y + G+ + A +F +M
Sbjct: 340 SLMSMYSKCGELEIAEQLF--INIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHI 397
Query: 226 ----------------------------------PDKNVGSWNAMISGLARCGMIENART 251
+ + + A+IS A+CG A
Sbjct: 398 KPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALK 457
Query: 252 LFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGS 311
F+ + +D ++++A+ GY + +A +V+ M+ + P + ML CA
Sbjct: 458 AFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSD 517
Query: 312 LDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKV-REVSTWNAMIG 370
+G ++ + ++ + + ALI+M+ KC L A +F+K + +WN M+
Sbjct: 518 YARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMN 577
Query: 371 GLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIE 430
G +HG+AE+A+ F +M EK +PN VTFV ++ A A + G+ + +S+ +
Sbjct: 578 GYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQC-GFC 636
Query: 431 PEMEHFGCVVDLLGRAGLVEEAEK-FIE------------------------------SM 459
+ +VD+ + G++E +EK FIE SM
Sbjct: 637 SQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSM 696
Query: 460 P---VKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNS-----GRYALLSNIYAK 511
+KP+ + ++L+ACR G VE G+R I +M R+ YA + ++ K
Sbjct: 697 QENELKPDSVSFLSVLSACRHAGLVEEGKR---IFEEMGERHKIEAEVEHYACMVDLLGK 753
Query: 512 AGRWDDVARVRKLMKERGIETVPGS 536
AG + + + + M+ + V G+
Sbjct: 754 AGLFGEAVEMMRRMRVKTSVGVWGA 778
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 234 bits (597), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 148/570 (25%), Positives = 280/570 (49%), Gaps = 57/570 (10%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSI 107
++ H ++++ V ++L YA+ + + A K+FD + +V ++ ++ +
Sbjct: 145 EKIHGYVIRSGFCGISSVQNSILCMYADSDSLS---ARKLFDEMSERDVISWSVVIRSYV 201
Query: 108 ENGEPHKAISCYHKMM-VLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLT-GD 165
++ EP + + +M+ + P+ T ++ KAC V + G H F +++G D
Sbjct: 202 QSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLAD 261
Query: 166 VHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM 225
V + ++ I MY+ A ++ DE+ T +++ WN+++ G++ + A E+F M
Sbjct: 262 VFVCNSLIDMYSKGFDVDSAFRVFDET--TCRNIVSWNSILAGFVHNQRYDEALEMFHLM 319
Query: 226 P---------------------------------------DKNVGSWNAMISGLARCGMI 246
+ N + +++I C ++
Sbjct: 320 VQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLV 379
Query: 247 ENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVC 306
++A T+ D M +D +S S +I G EA+ +F M+ P+ + S+L C
Sbjct: 380 DDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRD---TPNAITVISLLNAC 436
Query: 307 ANVGSLDQGRWIHSFVERNSIQV-DAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTW 365
+ L +W H R S+ + D +GT+++D Y KCG ++MA F+++ + + +W
Sbjct: 437 SVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISW 496
Query: 366 NAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKR 425
+I AI+G + A+ LF +M + PN VT++ L+AC H G+V++GL +F SM
Sbjct: 497 TVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVE 556
Query: 426 VYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMP--VKPNVAVWGALLNACRIH-GNVE 482
+ +P ++H+ C+VD+L RAG ++ A + I+++P VK + WGA+L+ CR +
Sbjct: 557 -EDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLI 615
Query: 483 LGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMG 542
+ V +L++EP S Y L S+ +A W+DVA +R+L+KER + V G SM+ G
Sbjct: 616 ITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREG 675
Query: 543 GKVHEFKMGD---SSHPQMKEIYLMLEKMM 569
F GD S ++ ++ L + M
Sbjct: 676 NLAKRFLAGDKLSQSDSELNDVVQSLHRCM 705
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 197/444 (44%), Gaps = 72/444 (16%)
Query: 88 FDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSV 147
FDC+ + N+ + G ++ G + + + K+ V PN T + AC
Sbjct: 84 FDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSLWF- 142
Query: 148 KEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMID 207
+G + H +V++ G G ++++ + MYA ARK+ DE ++ DVI W+ +I
Sbjct: 143 -DGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARKLFDE--MSERDVISWSVVIR 198
Query: 208 GYLK-----------------------CGEVEAANEVFVNMPDKNVGS------------ 232
Y++ C V + + M D +VG
Sbjct: 199 SYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFD 258
Query: 233 ------WNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQ 286
N++I ++ +++A +FDE R+ +SW++I+ G++ + + EALE+FH
Sbjct: 259 LADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHL 318
Query: 287 MQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGR 346
M +E ++ + S+L VC + IH + R + + V ++LID Y C
Sbjct: 319 MVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSL 378
Query: 347 LDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNA 406
+D A V + M ++V + + MI GLA GR+++A+ +F M + PN +T + +LNA
Sbjct: 379 VDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHM---RDTPNAITVISLLNA 435
Query: 407 C-----------AHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKF 455
C AH + R L + ++ +VD + G +E A +
Sbjct: 436 CSVSADLRTSKWAHGIAIRRSLAI-----------NDISVGTSIVDAYAKCGAIEMARRT 484
Query: 456 IESMPVKPNVAVWGALLNACRIHG 479
+ + K N+ W +++A I+G
Sbjct: 485 FDQITEK-NIISWTVIISAYAING 507
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 115/243 (47%), Gaps = 11/243 (4%)
Query: 234 NAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIK 293
N++ +CG + + FD M RD +SW+ I+ G + +E L F +++ +
Sbjct: 65 NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFE 124
Query: 294 PSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEV 353
P+ L ++ C ++ G IH +V R+ + + +++ MY L A ++
Sbjct: 125 PNTSTLVLVIHACRSLWF--DGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKL 181
Query: 354 FEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGE-KRKPNGVTFVGVLNACAHAGM 412
F++M R+V +W+ +I +KLF +M E K +P+ VT VL AC
Sbjct: 182 FDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMED 241
Query: 413 VERGLGLFN-SMKRVYEIEPEMEHFGC--VVDLLGRAGLVEEAEKFIESMPVKPNVAVWG 469
++ G + S++R +++ + F C ++D+ + V+ A + + + N+ W
Sbjct: 242 IDVGRSVHGFSIRRGFDLA---DVFVCNSLIDMYSKGFDVDSAFRVFDETTCR-NIVSWN 297
Query: 470 ALL 472
++L
Sbjct: 298 SIL 300
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 20/132 (15%)
Query: 277 FKEALEVFHQMQREKIK-PSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGT 335
++E + + ++QR ++ + P + CA + L QG NSI
Sbjct: 25 WREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQG---------NSIA------- 68
Query: 336 ALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKP 395
D Y+KCG L F+ M R+ +WN ++ GL +G E+ + F+K+ +P
Sbjct: 69 ---DFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEP 125
Query: 396 NGVTFVGVLNAC 407
N T V V++AC
Sbjct: 126 NTSTLVLVIHAC 137
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 86/214 (40%), Gaps = 40/214 (18%)
Query: 31 TVLDILNKKCFHS-LQHLKQAHAI-ILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVF 88
TV+ +LN + L+ K AH I I ++ +D V +++ YA +A + F
Sbjct: 428 TVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCG--AIEMARRTF 485
Query: 89 DCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVK 148
D I N+ + + NG P KA++ + +M PN TY AC G VK
Sbjct: 486 DQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVK 545
Query: 149 EGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDG 208
+G+ +V++ +Q Y+ ++D
Sbjct: 546 KGLMIFKSMVEED-------HKPSLQHYS--------------------------CIVDM 572
Query: 209 YLKCGEVEAANEVFVNMPDK---NVGSWNAMISG 239
+ GE++ A E+ N+P+ +W A++SG
Sbjct: 573 LSRAGEIDTAVELIKNLPEDVKAGASAWGAILSG 606
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 228 bits (582), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 116/307 (37%), Positives = 179/307 (58%), Gaps = 1/307 (0%)
Query: 234 NAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREK-I 292
N +I+ ++ +E LF+++ E ISW+++I G ++ A EVFHQM +
Sbjct: 386 NGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGL 445
Query: 293 KPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWE 352
P + S+L C+ + L+ G+ +H + RN+ + + + TALIDMY KCG A
Sbjct: 446 LPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAES 505
Query: 353 VFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGM 412
VF+ +K +TWN+MI G ++ G A+ + +M + KP+ +TF+GVL+AC H G
Sbjct: 506 VFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGF 565
Query: 413 VERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALL 472
V+ G F +M + + I P ++H+ +V LLGRA L EA I M +KP+ AVWGALL
Sbjct: 566 VDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALL 625
Query: 473 NACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIET 532
+AC IH +E+GE V + ++ +N G Y L+SN+YA WDDV RVR +MK+ G +
Sbjct: 626 SACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDG 685
Query: 533 VPGSSMM 539
G S +
Sbjct: 686 YLGVSQI 692
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 115/507 (22%), Positives = 199/507 (39%), Gaps = 48/507 (9%)
Query: 13 KPIELSSDQAPSSKLSQKTVLDIL---NKKCFHSLQ-HLKQAHAIILKTAHFHDHFVSGT 68
PI + D SS + I F+S + ++Q + K+ +V +
Sbjct: 31 SPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTS 90
Query: 69 LLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSR 128
LL Y T A +FD +P + V N + G NG A + M+
Sbjct: 91 LLNLYLKKG--CVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFS 148
Query: 129 PNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKM 188
P+ T L C G V +G H K GL D +K+A I Y+ A +
Sbjct: 149 PSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVL 208
Query: 189 LDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNV------------------ 230
E T + WN MI Y + G E A VF NM +KNV
Sbjct: 209 FREMKDKST--VSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHE 266
Query: 231 ---------GSWN------AMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQR 275
G N +++ +RCG + +A L+ + + ++I+ Y ++
Sbjct: 267 PLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKG 326
Query: 276 CFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGT 335
A+ F + ++ +K L +L C +D G +H + ++ + ++
Sbjct: 327 DMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVN 386
Query: 336 ALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMN-GEKRK 394
LI MY K ++ +FE+++ + +WN++I G GRA A ++F +M
Sbjct: 387 GLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLL 446
Query: 395 PNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGC--VVDLLGRAGLVEEA 452
P+ +T +L C+ + G L R E E+F C ++D+ + G +A
Sbjct: 447 PDAITIASLLAGCSQLCCLNLGKELHGYTLRN---NFENENFVCTALIDMYAKCGNEVQA 503
Query: 453 EKFIESMPVKPNVAVWGALLNACRIHG 479
E +S+ P A W ++++ + G
Sbjct: 504 ESVFKSIKA-PCTATWNSMISGYSLSG 529
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 151/360 (41%), Gaps = 53/360 (14%)
Query: 103 LKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVT-GSVK---EGVQFHAFVV 158
LK I I+ + ++ + PN FT +A + S K E VQ H +
Sbjct: 20 LKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTH--LT 77
Query: 159 KQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAA 218
K GL V++K++ + +Y G A+ + DE + D + WNA+I GY + G A
Sbjct: 78 KSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDE--MPERDTVVWNALICGYSRNGYECDA 135
Query: 219 NEVFVNMPDKNVGSW---------------------------------------NAMISG 239
++F+ M + NA+IS
Sbjct: 136 WKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISF 195
Query: 240 LARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLL 299
++C + +A LF EM ++ +SW+ +I Y + +EA+ VF M + ++ S +
Sbjct: 196 YSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTI 255
Query: 300 PSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKV 359
++L+ A+V +H V + + D + T+L+ Y +CG L A ++ K
Sbjct: 256 INLLS--AHVSH----EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQ 309
Query: 360 REVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGL 419
+ +++ A G + A+ F+K K + V VG+L+ C + ++ G+ L
Sbjct: 310 DSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSL 369
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 97/246 (39%), Gaps = 47/246 (19%)
Query: 51 HAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENG 110
H +K+ V L+ Y+ F++ +F+ + + N + G +++G
Sbjct: 370 HGYAIKSGLCTKTLVVNGLITMYSK--FDDVETVLFLFEQLQETPLISWNSVISGCVQSG 427
Query: 111 EPHKAISCYHKMMVLNSR-PNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIK 169
A +H+MM+ P+ T +L C+ + G + H + ++ +
Sbjct: 428 RASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENE---- 483
Query: 170 SAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKN 229
+ +C A+ID Y KCG A VF ++
Sbjct: 484 ----------------------------NFVC-TALIDMYAKCGNEVQAESVFKSIKAPC 514
Query: 230 VGSWNAMISGLARCGMIENARTLFDEMGER----DEISWSAIID-----GYIKQR--CFK 278
+WN+MISG + G+ A + + EM E+ DEI++ ++ G++ + CF+
Sbjct: 515 TATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFR 574
Query: 279 EALEVF 284
++ F
Sbjct: 575 AMIKEF 580
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 4/175 (2%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSI 107
K+ H L+ +++FV L+ YA N A VF I P N + G
Sbjct: 469 KELHGYTLRNNFENENFVCTALIDMYAKCG--NEVQAESVFKSIKAPCTATWNSMISGYS 526
Query: 108 ENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEG-VQFHAFVVKQGLTGDV 166
+G H+A+SCY +M +P++ T+ + AC G V EG + F A + + G++ +
Sbjct: 527 LSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTL 586
Query: 167 HIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEV 221
+ + + LF EA ++ + + D W A++ + E+E V
Sbjct: 587 QHYALMVGLLGRACLFTEALYLIWKM-DIKPDSAVWGALLSACIIHRELEVGEYV 640
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 144/512 (28%), Positives = 249/512 (48%), Gaps = 76/512 (14%)
Query: 44 LQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYL 103
L+ L+Q H ++K + + + +++ Y + A +VFD I P+ N+ +
Sbjct: 178 LRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRV--MSDARRVFDEIVNPSDVSWNVIV 235
Query: 104 KGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLT 163
+ +E G +A+ + KM+ LN RP T ++ AC+ + +++ G HA VK +
Sbjct: 236 RRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVV 295
Query: 164 GDVHIKSAGIQMY-------------------------------ASFGLFREARKMLDES 192
D + ++ MY A GL REAR++ D
Sbjct: 296 ADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDL- 354
Query: 193 GKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMP-------------------------- 226
+ +++ WNAM+ GY+ E + A + M
Sbjct: 355 -MPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQM 413
Query: 227 -------------DKNVGSWNAMISGLARCGMIENARTLFDEMGE-RDEISWSAIIDGYI 272
D NV NA++ +CG +++A F +M E RDE+SW+A++ G
Sbjct: 414 GKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVA 473
Query: 273 KQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAV 332
+ ++AL F MQ E KPS++ L ++L CAN+ +L+ G+ IH F+ R+ ++D V
Sbjct: 474 RVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVV 532
Query: 333 LGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEK 392
+ A++DMY KC D A EVF++ R++ WN++I G +GR+++ +LF + E
Sbjct: 533 IRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEG 592
Query: 393 RKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEA 452
KP+ VTF+G+L AC G VE G F+SM Y I P++EH+ C+++L + G + +
Sbjct: 593 VKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQL 652
Query: 453 EKFIESMPVKPNVAVWGALLNACRIHGNVELG 484
E+F+ MP P + + + +AC+ + +LG
Sbjct: 653 EEFLLLMPFDPPMQMLTRINDACQRYRWSKLG 684
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/505 (22%), Positives = 207/505 (40%), Gaps = 107/505 (21%)
Query: 84 ATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAV 143
A ++F+ +P + N + +NG + + +M R + ++ + K+C +
Sbjct: 115 ARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGL 174
Query: 144 TGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWN 203
++ Q H VVK G +G+V ++++ + +Y + +AR++ DE + WN
Sbjct: 175 ILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEI--VNPSDVSWN 232
Query: 204 AMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGL----------------------- 240
++ YL+ G + A +F M + NV N +S +
Sbjct: 233 VIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKL 292
Query: 241 ----------------ARCGMIENARTLFDE----------------------------- 255
+C +E+AR +FD+
Sbjct: 293 SVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELF 352
Query: 256 --MGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLD 313
M ER+ +SW+A++ GY+ + EAL+ M++E L +L VC+ + +
Sbjct: 353 DLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQ 412
Query: 314 QGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKM-KVREVSTWNAMIGGL 372
G+ H F+ R+ + ++ AL+DMY KCG L A F +M ++R+ +WNA++ G+
Sbjct: 413 MGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGV 472
Query: 373 AIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACA-----------HAGMVERGLGL-- 419
A GR+E A+ F M E KP+ T +L CA H ++ G +
Sbjct: 473 ARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDV 531
Query: 420 --------FNSMKRVYEIEPEMEHFGCVVDLL------------GRAGLVEEAEKFIESM 459
S R ++ E+ DL+ GR+ V E +E+
Sbjct: 532 VIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENE 591
Query: 460 PVKPNVAVWGALLNACRIHGNVELG 484
VKP+ + +L AC G+VELG
Sbjct: 592 GVKPDHVTFLGILQACIREGHVELG 616
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 164/415 (39%), Gaps = 115/415 (27%)
Query: 181 LFRE--ARKMLDESGKTQTDVICW---------NAMIDGYLKCGEVEAANEVFVNMPDKN 229
LFR ++ ++ ++ K Q+ ++ + N I+ Y KCG V+ A E+F MP+++
Sbjct: 67 LFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERD 126
Query: 230 VGSWNAMISGLARCGMIENARTLFDEMGERD-----EISW-------------------- 264
GSWNA+I+ A+ G+ + +F M RD E S+
Sbjct: 127 GGSWNAVITACAQNGVSDEVFRMFRRMN-RDGVRATETSFAGVLKSCGLILDLRLLRQLH 185
Query: 265 ---------------SAIIDGYIKQRCFKEALEVFHQ----------------------- 286
++I+D Y K R +A VF +
Sbjct: 186 CAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFND 245
Query: 287 --------MQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALI 338
M ++P H + S++ C+ +L+ G+ IH+ + S+ D V+ T++
Sbjct: 246 EAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVF 305
Query: 339 DMYVKCGRLDMA--------------W-----------------EVFEKMKVREVSTWNA 367
DMYVKC RL+ A W E+F+ M R + +WNA
Sbjct: 306 DMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNA 365
Query: 368 MIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVY 427
M+GG ++A+ T M E + VT V +LN C+ V+ G + R +
Sbjct: 366 MLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYR-H 424
Query: 428 EIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVE 482
+ + ++D+ G+ G ++ A + M + W ALL G E
Sbjct: 425 GYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSE 479
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 144/325 (44%), Gaps = 9/325 (2%)
Query: 234 NAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIK 293
N I +CG +++AR LF+EM ERD SW+A+I + E +F +M R+ ++
Sbjct: 100 NRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVR 159
Query: 294 PSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEV 353
+ +L C + L R +H V + + L T+++D+Y KC + A V
Sbjct: 160 ATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRV 219
Query: 354 FEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMV 413
F+++ +WN ++ G ++A+ +F KM +P T V+ AC+ + +
Sbjct: 220 FDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLAL 279
Query: 414 ERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLN 473
E G + +++ + + V D+ + +E A + + K ++ W + ++
Sbjct: 280 EVG-KVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSK-DLKSWTSAMS 337
Query: 474 ACRIHGNVELGERVGWILLDMEP-RNSGRYALLSNIYAKAGRWDDVARVRKLMKE--RGI 530
+ G L D+ P RN + + Y A WD+ LM++ I
Sbjct: 338 GYAMSGLTREARE----LFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENI 393
Query: 531 ETVPGSSMMDMGGKVHEFKMGDSSH 555
+ V ++++ + + +MG +H
Sbjct: 394 DNVTLVWILNVCSGISDVQMGKQAH 418
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 115/284 (40%), Gaps = 18/284 (6%)
Query: 44 LQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVC-NIY 102
+Q KQAH I + + + V+ LL Y A F + V N
Sbjct: 411 VQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCG--TLQSANIWFRQMSELRDEVSWNAL 468
Query: 103 LKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGL 162
L G G +A+S + M V ++P+K+T TL CA ++ G H F+++ G
Sbjct: 469 LTGVARVGRSEQALSFFEGMQV-EAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGY 527
Query: 163 TGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVF 222
DV I+ A + MY+ F A ++ E+ D+I WN++I G + G + E+F
Sbjct: 528 KIDVVIRGAMVDMYSKCRCFDYAIEVFKEAAT--RDLILWNSIIRGCCRNGRSKEVFELF 585
Query: 223 VNMPDKNVG----SWNAMISGLARCGMIENARTLFDEMGERDEIS-----WSAIIDGYIK 273
+ + ++ V ++ ++ R G +E F M + IS + +I+ Y K
Sbjct: 586 MLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCK 645
Query: 274 QRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRW 317
C + E M P +L + C G W
Sbjct: 646 YGCLHQLEEFLLLM---PFDPPMQMLTRINDACQRYRWSKLGAW 686
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 87/187 (46%), Gaps = 20/187 (10%)
Query: 295 SRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVF 354
S L + C++ + Q R + S + S L I+ Y KCG +D A E+F
Sbjct: 60 SYWLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELF 119
Query: 355 EKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVE 414
E+M R+ +WNA+I A +G +++ ++F +MN + + +F GVL +C
Sbjct: 120 EEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSC------- 172
Query: 415 RGLGLFNSMKRVYEIEPEMEHFG---------CVVDLLGRAGLVEEAEKFIESMPVKPNV 465
GL ++ + ++ + +G +VD+ G+ ++ +A + + + V P+
Sbjct: 173 ---GLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEI-VNPSD 228
Query: 466 AVWGALL 472
W ++
Sbjct: 229 VSWNVIV 235
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 225 bits (573), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 126/396 (31%), Positives = 212/396 (53%), Gaps = 33/396 (8%)
Query: 273 KQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAV 332
++R +K+A+E+ + P R + CAN+ SL+ + +H ++ + D
Sbjct: 217 QRRLYKDAIELLDK----GAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPK 272
Query: 333 LGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEK 392
L +I M+ +C + A VF+ M +++ +W+ M+ + +G +DA+ LF +M
Sbjct: 273 LNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHG 332
Query: 393 RKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEA 452
KPN TF+ V ACA G +E F+SMK + I P+ EH+ V+ +LG+ G + EA
Sbjct: 333 LKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEA 392
Query: 453 EKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKA 512
E++I +P +P W A+ N R+HG+++L + + +++D++P A+++ I
Sbjct: 393 EQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDPSK----AVINKIPTPP 448
Query: 513 GRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKL 572
K KE ++M+ ++ EF+ Y K M
Sbjct: 449 P---------KSFKE--------TNMVTSKSRILEFR--------NLTFYKDEAKEMAAK 483
Query: 573 QIEGYSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVCADCH 632
+ Y P+T V +DI++E KE L HSE++A+A+G++ P TL I+KNLRVC DCH
Sbjct: 484 KGVVYVPDTRFVLHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCH 543
Query: 633 SAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
+ K++SKI G +I+RD R+HHFK+G CSC D+W
Sbjct: 544 NFIKIMSKIIGRVLIVRDNKRFHHFKDGKCSCGDYW 579
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 181 LFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEV--------FVNMPDKNVGS 232
L+++A ++LD+ D C+ + + +E + +V F P N
Sbjct: 220 LYKDAIELLDKGA--MPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLN--- 274
Query: 233 WNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKI 292
N +IS C I +A+ +FD M ++D SW ++ Y +AL +F +M + +
Sbjct: 275 -NMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGL 333
Query: 293 KPSRHLLPSMLTVCANVGSLDQGRWIHSFVERN----SIQVDAVLGTALIDMYVKCGRLD 348
KP+ ++ CA VG +++ ++H +N S + + LG ++ + KCG L
Sbjct: 334 KPNEETFLTVFLACATVGGIEEA-FLHFDSMKNEHGISPKTEHYLG--VLGVLGKCGHLV 390
Query: 349 MAWEVFEKMKVREVST-WNAMIGGLAIHG 376
A + + + W AM +HG
Sbjct: 391 EAEQYIRDLPFEPTADFWEAMRNYARLHG 419
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 222 bits (565), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 150/516 (29%), Positives = 255/516 (49%), Gaps = 55/516 (10%)
Query: 69 LLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSR 128
+L+C NF T A +FD +P+ ++ N L + +G P+ ++ + ++ +
Sbjct: 24 VLRCVFIRNFA--THADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPD 81
Query: 129 PNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKM 188
+ T+ + AC++ + G Q HA ++KQG K+A I MY+ +G ++ ++
Sbjct: 82 LSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRV 141
Query: 189 LDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGS---------------- 232
+ + D++ WNA++ G+L+ G+ + A VF M + V
Sbjct: 142 FESV--EEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLK 199
Query: 233 ----------------------WNAMISGLARCGMIENARTLFDEMG-ERDEISWSAIID 269
AMIS + G+I A +++ + DE+ +++I
Sbjct: 200 ILQQGKQVHAMVVVTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLIS 259
Query: 270 GYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQV 329
G I+ R +KEA F M R++ P+ +L S L C++ L G+ IH RN
Sbjct: 260 GCIRNRNYKEA---FLLMSRQR--PNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVS 314
Query: 330 DAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKM- 388
D+ L L+DMY KCG++ A +F + + V +W +MI A++G A+++F +M
Sbjct: 315 DSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMC 374
Query: 389 -NGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAG 447
G PN VTF+ V++ACAHAG+V+ G F MK Y + P EH+ C +D+L +AG
Sbjct: 375 EEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAG 434
Query: 448 LVEEAEKFIESMPVKPN----VAVWGALLNACRIHGNVELGERVGWILL-DMEPRNSGRY 502
EE + +E M N A+W A+L+AC ++ ++ GE V L+ + P N+ Y
Sbjct: 435 ETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIY 494
Query: 503 ALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSM 538
L+SN YA G+WD V +R +K +G+ G S+
Sbjct: 495 VLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHSL 530
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 129/263 (49%), Gaps = 20/263 (7%)
Query: 222 FVNMPDKNVGSWNAMISGLARCGMIENART----LFDEMGERDEISWSAIIDGYIKQRCF 277
F+ + + V S N ++ RC I N T LFDE+ +RD S ++ + +++
Sbjct: 10 FIRLGNVTVKSTNLVL----RCVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNP 65
Query: 278 KEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTAL 337
+ L +F Q+ R S H +L C+ + + GR +H+ + + + + TAL
Sbjct: 66 NDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTAL 125
Query: 338 IDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNG 397
IDMY K G L + VFE ++ +++ +WNA++ G +G+ ++A+ +F M E+ + +
Sbjct: 126 IDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISE 185
Query: 398 VTFVGVLNACAHAGMVERGLGLFNSMKRVYEI----EPEMEHFG-CVVDLLGRAGLVEEA 452
T V+ CA ++++G K+V+ + ++ G ++ GL+ EA
Sbjct: 186 FTLSSVVKTCASLKILQQG-------KQVHAMVVVTGRDLVVLGTAMISFYSSVGLINEA 238
Query: 453 EKFIESMPVKPNVAVWGALLNAC 475
K S+ V + + +L++ C
Sbjct: 239 MKVYNSLNVHTDEVMLNSLISGC 261
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 140/335 (41%), Gaps = 37/335 (11%)
Query: 44 LQHLKQAHAIILKTAHFHDHFVSGT-LLKCYANPNFNNFTLATKVFDCIP-RPNVFVCNI 101
LQ KQ HA+++ T D V GT ++ Y++ N A KV++ + + + N
Sbjct: 201 LQQGKQVHAMVVVTGR--DLVVLGTAMISFYSSVGLIN--EAMKVYNSLNVHTDEVMLNS 256
Query: 102 YLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQG 161
+ G I N +A +++ RPN + C+ + G Q H ++ G
Sbjct: 257 LISGCIRNRNYKEAF-----LLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNG 311
Query: 162 LTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEV 221
D + + + MY G +AR + V+ W +MID Y G+ A E+
Sbjct: 312 FVSDSKLCNGLMDMYGKCGQIVQARTIF--RAIPSKSVVSWTSMIDAYAVNGDGVKALEI 369
Query: 222 FVNMPDKNVG------SWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQR 275
F M ++ G ++ +IS A G+++ + F M E+ ++ G
Sbjct: 370 FREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYR-----LVPGTEHYV 424
Query: 276 CFKEAL-------EVFHQMQREKIKPSRHLLP-----SMLTVCANVGSLDQGRWIHSFVE 323
CF + L E++ ++R ++ +P ++L+ C+ L +G ++ +
Sbjct: 425 CFIDILSKAGETEEIWRLVER-MMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLM 483
Query: 324 RNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMK 358
+ +A + + + Y G+ D+ E+ K+K
Sbjct: 484 EETGPENASIYVLVSNFYAAMGKWDVVEELRGKLK 518
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 149/548 (27%), Positives = 265/548 (48%), Gaps = 49/548 (8%)
Query: 54 ILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPH 113
I+K + + V ++L Y++ + A ++FDC+ + N + GS++N +
Sbjct: 225 IIKLGYSDNVVVQTSVLGMYSSCG--DLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIE 282
Query: 114 KAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGI 173
+ + M++ P +FTY + C+ GS G HA ++ D+ + +A +
Sbjct: 283 DGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALL 342
Query: 174 QMYASFGLFREARKMLDESGKTQT-DVICWNAMIDGYLKCGEVEAANEVF-----VNMPD 227
MY S G REA + G+ +++ WN++I G + G E A ++ ++ P
Sbjct: 343 DMYCSCGDMREAFYVF---GRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPR 399
Query: 228 KNVGSWNAMIS---------------------GLARCGMI--------------ENARTL 252
+ +++A IS G R + E+A+ +
Sbjct: 400 PDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKV 459
Query: 253 FDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSL 312
FD M ERD + W+ +I G+ + + A++ F +M REK + L S++ C+++ L
Sbjct: 460 FDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAML 519
Query: 313 DQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGL 372
QG H R + AL+DMY K G+ + A +F ++ WN+M+G
Sbjct: 520 RQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAY 579
Query: 373 AIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPE 432
+ HG E A+ F ++ P+ VT++ +L AC+H G +G L+N MK I+
Sbjct: 580 SQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKE-QGIKAG 638
Query: 433 MEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVA-VWGALLNACRIHGNVELGERVGWIL 491
+H+ C+V+L+ +AGLV+EA + IE P N A +W LL+AC N+++G +
Sbjct: 639 FKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQI 698
Query: 492 LDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDM-GGKVHEFKM 550
L ++P ++ + LLSN+YA GRW+DVA +R+ ++ PG S +++ F
Sbjct: 699 LKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSS 758
Query: 551 GDSSHPQM 558
GD S+P++
Sbjct: 759 GDQSNPEV 766
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 125/493 (25%), Positives = 216/493 (43%), Gaps = 52/493 (10%)
Query: 36 LNKKC--FHSLQHLKQAHAIILKT---AHFHDHFVSGTLLKCYANPNFNNFTLATKVFDC 90
L +KC L+ +Q HA++L A + + L+ Y + A KVFD
Sbjct: 100 LTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCG--SLEQARKVFDK 157
Query: 91 IPRPNVFVCNIYLKGSIENGE-PHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKE 149
+P NV N N + A M +PN T+ +L + CAV V
Sbjct: 158 MPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLM 217
Query: 150 GVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGY 209
G ++ ++K G + +V ++++ + MY+S G AR++ D D + WN MI G
Sbjct: 218 GSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFD--CVNNRDAVAWNTMIVGS 275
Query: 210 LKCGEVEAANEVFVNM------PDK-----------NVGSW------------------- 233
LK ++E F NM P + +GS+
Sbjct: 276 LKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADL 335
Query: 234 ---NAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQRE 290
NA++ CG + A +F + + +SW++II G + ++A+ ++ ++ R
Sbjct: 336 PLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRM 395
Query: 291 KI-KPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDM 349
+P + + ++ A G+ +H V + + +GT L+ MY K +
Sbjct: 396 STPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAES 455
Query: 350 AWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAH 409
A +VF+ MK R+V W MI G + G +E A++ F +M EK + +G + V+ AC+
Sbjct: 456 AQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSD 515
Query: 410 AGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWG 469
M+ +G +F+ + + M G +VD+ G+ G E AE I S+ P++ W
Sbjct: 516 MAMLRQG-EVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAET-IFSLASNPDLKCWN 573
Query: 470 ALLNACRIHGNVE 482
++L A HG VE
Sbjct: 574 SMLGAYSQHGMVE 586
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 128/561 (22%), Positives = 231/561 (41%), Gaps = 87/561 (15%)
Query: 73 YANPNF-------NNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMV- 124
YAN N ++ A KVFD +P+ N+ + L G E S H ++
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNI----VTLFGLSAVFEYVSMGSSLHSQIIK 78
Query: 125 LNSRPNKFTYPT---------LFKACAVTGSVKEGVQFHAFVVKQGL---TGDVHIKSAG 172
L S F P L + C +K Q HA V+ G T + +
Sbjct: 79 LGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNL 138
Query: 173 IQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLK--------------------- 211
I MY G +ARK+ D+ +V+ +NA+ Y +
Sbjct: 139 ISMYVRCGSLEQARKVFDK--MPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVK 196
Query: 212 ------------CGEVE------AANEVFVNMP-DKNVGSWNAMISGLARCGMIENARTL 252
C +E + N + + NV +++ + CG +E+AR +
Sbjct: 197 PNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRI 256
Query: 253 FDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSL 312
FD + RD ++W+ +I G +K ++ L F M + P++ +L C+ +GS
Sbjct: 257 FDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSY 316
Query: 313 DQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGL 372
G+ IH+ + + D L AL+DMY CG + A+ VF ++ + +WN++I G
Sbjct: 317 SLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGC 376
Query: 373 AIHGRAEDAMKLFTK-MNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEP 431
+ +G E AM ++ + + +P+ TF ++A A G L + ++ E
Sbjct: 377 SENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKL-GYER 435
Query: 432 EMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWIL 491
+ ++ + + E A+K + M + +V +W ++ GN EL + +I
Sbjct: 436 SVFVGTTLLSMYFKNREAESAQKVFDVMKER-DVVLWTEMIVGHSRLGNSELAVQF-FIE 493
Query: 492 LDMEPRNSGRYALLSNIYAKAGRWDDVARVRK------LMKERGIETVPG--SSMMDMGG 543
+ E S ++L S I G D+A +R+ L G + V +++DM G
Sbjct: 494 MYREKNRSDGFSLSSVI----GACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYG 549
Query: 544 KVHEFKMGDS-----SHPQMK 559
K +++ ++ S+P +K
Sbjct: 550 KNGKYETAETIFSLASNPDLK 570
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 149/334 (44%), Gaps = 11/334 (3%)
Query: 234 NAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKE-ALEVFHQMQREKI 292
N +IS RCG +E AR +FD+M R+ +S++A+ Y + F A + M E +
Sbjct: 136 NNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYV 195
Query: 293 KPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWE 352
KP+ S++ VCA + + G ++S + + + V+ T+++ MY CG L+ A
Sbjct: 196 KPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARR 255
Query: 353 VFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGM 412
+F+ + R+ WN MI G + + ED + F M P T+ VLN C+ G
Sbjct: 256 IFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGS 315
Query: 413 VERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALL 472
G L ++ V + ++ ++D+ G + EA ++ PN+ W +++
Sbjct: 316 YSLG-KLIHARIIVSDSLADLPLDNALLDMYCSCGDMREA-FYVFGRIHNPNLVSWNSII 373
Query: 473 NACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDV------ARVRKLMK 526
+ C +G E + LL M Y + I A A V +V KL
Sbjct: 374 SGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGY 433
Query: 527 ERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKE 560
ER + G++++ M K E + MKE
Sbjct: 434 ERSV--FVGTTLLSMYFKNREAESAQKVFDVMKE 465
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 152/552 (27%), Positives = 262/552 (47%), Gaps = 51/552 (9%)
Query: 49 QAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFD-CIPRPNVFVCNIYLKGSI 107
Q H + LK D VS +L+ YA F+ KVFD + R V C+I +
Sbjct: 68 QLHCLCLKAGADCDTVVSNSLISMYAK--FSRKYAVRKVFDEMLHRDTVSYCSI-INSCC 124
Query: 108 ENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSV-KEGVQFHAFV-VKQGLTGD 165
++G ++A+ +M P +L C GS K FHA V V + +
Sbjct: 125 QDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQES 184
Query: 166 VHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM 225
V + +A + MY F A + D+ + + W AMI G + E ++F M
Sbjct: 185 VLLSTALVDMYLKFDDHAAAFHVFDQ--MEVKNEVSWTAMISGCVANQNYEMGVDLFRAM 242
Query: 226 ------PDK-------------NVGS---------------------WNAMISGLARCGM 245
P++ N GS A ++ RCG
Sbjct: 243 QRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGN 302
Query: 246 IENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTV 305
+ +R LF+ RD + WS++I GY + E + + +QM++E I+ + L ++++
Sbjct: 303 VSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSA 362
Query: 306 CANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTW 365
C N L +HS + + +LG ALIDMY KCG L A EVF ++ +++ +W
Sbjct: 363 CTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSW 422
Query: 366 NAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKR 425
++MI +HG +A+++F M + + + F+ +L+AC HAG+VE +F +
Sbjct: 423 SSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGK 482
Query: 426 VYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVEL-G 484
Y + +EH+ C ++LLGR G +++A + +MP+KP+ +W +LL+AC HG +++ G
Sbjct: 483 -YHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAG 541
Query: 485 ERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGK 544
+ + L+ EP N Y LLS I+ ++G + VR++M+ R + G S ++ +
Sbjct: 542 KIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIEPELQ 601
Query: 545 VHEFKMGDSSHP 556
+ +++ G S P
Sbjct: 602 IEDYQ-GKSWSP 612
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 120/275 (43%), Gaps = 15/275 (5%)
Query: 47 LKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGS 106
+K+ H + D ++ + Y N +L+ +F+ +V + + + G
Sbjct: 271 VKEIHGFSFRHGCHADERLTAAFMTMYCRCG--NVSLSRVLFETSKVRDVVMWSSMISGY 328
Query: 107 IENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDV 166
E G+ + ++ ++M N T + AC + + H+ ++K G +
Sbjct: 329 AETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHI 388
Query: 167 HIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM- 225
+ +A I MYA G AR++ E T+ D++ W++MI+ Y G A E+F M
Sbjct: 389 LLGNALIDMYAKCGSLSAAREVFYE--LTEKDLVSWSSMINAYGLHGHGSEALEIFKGMI 446
Query: 226 ---PDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEI----SWSAIIDGYIKQRCFK 278
+ + ++ A++S G++E A+T+F + G+ ++ I+ +
Sbjct: 447 KGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKID 506
Query: 279 EALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLD 313
+A EV M +KPS + S+L+ C G LD
Sbjct: 507 DAFEVTINM---PMKPSARIWSSLLSACETHGRLD 538
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 94/220 (42%), Gaps = 4/220 (1%)
Query: 268 IDGYIKQRCFKEALEVFH-QMQREKIKPSRHLLPSMLTVCA-NVGSLDQGRWIHSFVERN 325
+ G + + + EAL ++ ++ +LPS++ CA G +H +
Sbjct: 17 LKGLVSDQFYDEALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKA 76
Query: 326 SIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLF 385
D V+ +LI MY K R +VF++M R+ ++ ++I G +AMKL
Sbjct: 77 GADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLI 136
Query: 386 TKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYE-IEPEMEHFGCVVDLLG 444
+M P +L C G + +F+++ V E ++ + +VD+
Sbjct: 137 KEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYL 196
Query: 445 RAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELG 484
+ A + M VK V+ W A+++ C + N E+G
Sbjct: 197 KFDDHAAAFHVFDQMEVKNEVS-WTAMISGCVANQNYEMG 235
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 219 bits (559), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 126/401 (31%), Positives = 212/401 (52%), Gaps = 16/401 (3%)
Query: 268 IDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSI 327
+D ++ K+A+E+ + E L + +C + +L + + +H F+ +
Sbjct: 153 LDSICREGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVG 212
Query: 328 QVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTK 387
D ++I+MY CG ++ A VF M R + TW +I A +G+ EDA+ F++
Sbjct: 213 ISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSR 272
Query: 388 MNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAG 447
E KP+G F + AC G + GL F SM + Y I P MEH+ +V +L G
Sbjct: 273 FKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPG 332
Query: 448 LVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSN 507
++EA +F+ESM +PNV +W L+N R+HG++ LG+R ++ ++ A N
Sbjct: 333 YLDEALRFVESM--EPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLD-------ASRLN 383
Query: 508 IYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEK 567
+KAG + L+KE+ G + + GD S P+ +E+Y+ L+
Sbjct: 384 KESKAGLVP--VKSSDLVKEKLQRMAKGPNY-----GIRYMAAGDISRPENRELYMALKS 436
Query: 568 MMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRV 627
+ + + GY P + + +D+++E K+ L H+E+ A L + + ++KNLRV
Sbjct: 437 LKEHMIEIGYVPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRV 496
Query: 628 CADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
CADCH+A KL+SKI G +I RD R+HH K+G+CSC+++W
Sbjct: 497 CADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 9/173 (5%)
Query: 212 CGEVEAANEVFV-------NMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISW 264
CG+ +A E V ++ ++ ++N++I + CG +E+A T+F+ M ER+ +W
Sbjct: 191 CGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETW 250
Query: 265 SAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRW-IHSFVE 323
+I + K ++A++ F + ++E KP + + C +G +++G S +
Sbjct: 251 CGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYK 310
Query: 324 RNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHG 376
I +L+ M + G LD A E M+ V W ++ +HG
Sbjct: 311 EYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESMEPN-VDLWETLMNLSRVHG 362
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 218 bits (554), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 143/548 (26%), Positives = 248/548 (45%), Gaps = 80/548 (14%)
Query: 100 NIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVK 159
N+ + I N +++S Y +MM R ++FTYP++ KACA G H +
Sbjct: 153 NVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEV 212
Query: 160 QGLTGDVHIKSAGIQMYASFGLFREARKMLDESGK------------------------- 194
++++ +A I MY FG AR++ D +
Sbjct: 213 SSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKL 272
Query: 195 --------TQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNV--GS------------ 232
+ ++ WN + G L+ G A V M + NV GS
Sbjct: 273 LDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSH 332
Query: 233 -----W----------------------NAMISGLARCGMIENARTLFDEMGERDEISWS 265
W N++I+ +RC + +A +F ++ +W+
Sbjct: 333 IGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWN 392
Query: 266 AIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERN 325
+II G+ +E + +M P+ L S+L + A VG+L G+ H ++ R
Sbjct: 393 SIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRR 452
Query: 326 SIQVDA-VLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKL 384
D +L +L+DMY K G + A VF+ M+ R+ T+ ++I G G+ E A+
Sbjct: 453 QSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAW 512
Query: 385 FTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLG 444
F M+ KP+ VT V VL+AC+H+ +V G LF M+ V+ I +EH+ C+VDL
Sbjct: 513 FKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYC 572
Query: 445 RAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVG-WILLDMEPRNSGRYA 503
RAG +++A ++P +P+ A+ LL AC IHGN +GE +LL+ +P + G Y
Sbjct: 573 RAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYM 632
Query: 504 LLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYL 563
LL+++YA G W + V+ L+ + G++ ++M+ ++ G+++ P + +
Sbjct: 633 LLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSELD----GENNKPMNDDSVI 688
Query: 564 MLEKMMDK 571
E+ D+
Sbjct: 689 NQEQSSDE 696
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 88/167 (52%)
Query: 245 MIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLT 304
+++ A+T+ + + W+ +I YI+ + F+E++ V+ +M + I+ PS++
Sbjct: 133 LLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIK 192
Query: 305 VCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVST 364
CA + GR +H +E +S + + + ALI MY + G++D+A +F++M R+ +
Sbjct: 193 ACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVS 252
Query: 365 WNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAG 411
WNA+I + +A KL +M + + VT+ + C AG
Sbjct: 253 WNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 146/362 (40%), Gaps = 77/362 (21%)
Query: 38 KKCFH--SLQHLKQAHAIILKTAHF-HD-HFVSGTLLKCYANPNFNNFTLATKVFDCIPR 93
K C H +L+ K H +++++ F HD V +L+ Y+ + + A VF +
Sbjct: 328 KACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCS--DLRHAFIVFQQVEA 385
Query: 94 PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQF 153
++ N + G N + +M++ PN T ++ A G+++ G +F
Sbjct: 386 NSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEF 445
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCG 213
H +++++ D +I WN+++D Y K G
Sbjct: 446 HCYILRRQSYKDC--------------------------------LILWNSLVDMYAKSG 473
Query: 214 EVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIK 273
E+ AA VF +M ++ ++ ++I G R G E A ++W
Sbjct: 474 EIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVA------------LAW--------- 512
Query: 274 QRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVER-NSIQVDAV 332
F M R IKP + ++L+ C++ + +G W+ + +E I++
Sbjct: 513 ----------FKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLE 562
Query: 333 LGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNA-MIGGLAIHGR------AEDAMKLF 385
+ ++D+Y + G LD A ++F + S A ++ IHG A D + L
Sbjct: 563 HYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLE 622
Query: 386 TK 387
TK
Sbjct: 623 TK 624
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 80/180 (44%), Gaps = 16/180 (8%)
Query: 301 SMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR 360
S+L+ C G+ +H+ + ++ D+VL L+ Y LD A + E ++
Sbjct: 88 SLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEIL 147
Query: 361 EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLF 420
WN +IG + R ++++ ++ +M + + + T+ V+ AC A +++ G
Sbjct: 148 HPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKAC--AALLDFAYG-- 203
Query: 421 NSMKRVYEIEPEMEHFGC-------VVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLN 473
RV E+ C ++ + R G V+ A + + M + V+ W A++N
Sbjct: 204 ----RVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVS-WNAIIN 258
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 218 bits (554), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 143/548 (26%), Positives = 248/548 (45%), Gaps = 80/548 (14%)
Query: 100 NIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVK 159
N+ + I N +++S Y +MM R ++FTYP++ KACA G H +
Sbjct: 153 NVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEV 212
Query: 160 QGLTGDVHIKSAGIQMYASFGLFREARKMLDESGK------------------------- 194
++++ +A I MY FG AR++ D +
Sbjct: 213 SSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKL 272
Query: 195 --------TQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNV--GS------------ 232
+ ++ WN + G L+ G A V M + NV GS
Sbjct: 273 LDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSH 332
Query: 233 -----W----------------------NAMISGLARCGMIENARTLFDEMGERDEISWS 265
W N++I+ +RC + +A +F ++ +W+
Sbjct: 333 IGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWN 392
Query: 266 AIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERN 325
+II G+ +E + +M P+ L S+L + A VG+L G+ H ++ R
Sbjct: 393 SIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRR 452
Query: 326 SIQVDA-VLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKL 384
D +L +L+DMY K G + A VF+ M+ R+ T+ ++I G G+ E A+
Sbjct: 453 QSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAW 512
Query: 385 FTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLG 444
F M+ KP+ VT V VL+AC+H+ +V G LF M+ V+ I +EH+ C+VDL
Sbjct: 513 FKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYC 572
Query: 445 RAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVG-WILLDMEPRNSGRYA 503
RAG +++A ++P +P+ A+ LL AC IHGN +GE +LL+ +P + G Y
Sbjct: 573 RAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYM 632
Query: 504 LLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYL 563
LL+++YA G W + V+ L+ + G++ ++M+ ++ G+++ P + +
Sbjct: 633 LLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSELD----GENNKPMNDDSVI 688
Query: 564 MLEKMMDK 571
E+ D+
Sbjct: 689 NQEQSSDE 696
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 88/167 (52%)
Query: 245 MIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLT 304
+++ A+T+ + + W+ +I YI+ + F+E++ V+ +M + I+ PS++
Sbjct: 133 LLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIK 192
Query: 305 VCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVST 364
CA + GR +H +E +S + + + ALI MY + G++D+A +F++M R+ +
Sbjct: 193 ACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVS 252
Query: 365 WNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAG 411
WNA+I + +A KL +M + + VT+ + C AG
Sbjct: 253 WNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 146/362 (40%), Gaps = 77/362 (21%)
Query: 38 KKCFH--SLQHLKQAHAIILKTAHF-HD-HFVSGTLLKCYANPNFNNFTLATKVFDCIPR 93
K C H +L+ K H +++++ F HD V +L+ Y+ + + A VF +
Sbjct: 328 KACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCS--DLRHAFIVFQQVEA 385
Query: 94 PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQF 153
++ N + G N + +M++ PN T ++ A G+++ G +F
Sbjct: 386 NSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEF 445
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCG 213
H +++++ D +I WN+++D Y K G
Sbjct: 446 HCYILRRQSYKDC--------------------------------LILWNSLVDMYAKSG 473
Query: 214 EVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIK 273
E+ AA VF +M ++ ++ ++I G R G E A ++W
Sbjct: 474 EIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVA------------LAW--------- 512
Query: 274 QRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVER-NSIQVDAV 332
F M R IKP + ++L+ C++ + +G W+ + +E I++
Sbjct: 513 ----------FKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLE 562
Query: 333 LGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNA-MIGGLAIHGR------AEDAMKLF 385
+ ++D+Y + G LD A ++F + S A ++ IHG A D + L
Sbjct: 563 HYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLE 622
Query: 386 TK 387
TK
Sbjct: 623 TK 624
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 80/180 (44%), Gaps = 16/180 (8%)
Query: 301 SMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR 360
S+L+ C G+ +H+ + ++ D+VL L+ Y LD A + E ++
Sbjct: 88 SLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEIL 147
Query: 361 EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLF 420
WN +IG + R ++++ ++ +M + + + T+ V+ AC A +++ G
Sbjct: 148 HPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKAC--AALLDFAYG-- 203
Query: 421 NSMKRVYEIEPEMEHFGC-------VVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLN 473
RV E+ C ++ + R G V+ A + + M + V+ W A++N
Sbjct: 204 ----RVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVS-WNAIIN 258
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 141/506 (27%), Positives = 250/506 (49%), Gaps = 9/506 (1%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSI 107
+Q H + K + +S +L++ Y + + A KVFD +P P+V N + G +
Sbjct: 75 RQLHGYVTKHGFVSNTRLSNSLMRFYKTSD--SLEDAHKVFDEMPDPDVISWNSLVSGYV 132
Query: 108 ENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGL-TGDV 166
++G + I + ++ + PN+F++ ACA G H+ +VK GL G+V
Sbjct: 133 QSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNV 192
Query: 167 HIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMP 226
+ + I MY G +A + + D + WNA++ + G++E F MP
Sbjct: 193 VVGNCLIDMYGKCGFMDDAVLVFQH--MEEKDTVSWNAIVASCSRNGKLELGLWFFHQMP 250
Query: 227 DKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQ 286
+ + ++N +I + G NA + +M + SW+ I+ GY+ EA E F +
Sbjct: 251 NPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTK 310
Query: 287 MQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGR 346
M ++ + L +L A + + G IH+ + + V+ +ALIDMY KCG
Sbjct: 311 MHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGM 370
Query: 347 LDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEK-RKPNGVTFVGVLN 405
L A +F M + + WN MI G A +G + +A+KLF ++ E+ KP+ TF+ +L
Sbjct: 371 LKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLA 430
Query: 406 ACAHAGM-VERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPN 464
C+H + +E LG F M Y I+P +EH ++ +G+ G V +A++ I+ +
Sbjct: 431 VCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYD 490
Query: 465 VAVWGALLNACRIHGNVELGERVGWILLDM--EPRNSGRYALLSNIYAKAGRWDDVARVR 522
W ALL AC +++ + V ++++ ++ Y ++SN+YA RW +V ++R
Sbjct: 491 GVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIR 550
Query: 523 KLMKERGIETVPGSSMMDMGGKVHEF 548
K+M+E G+ GSS +D K +
Sbjct: 551 KIMRESGVLKEVGSSWIDSRTKCSSY 576
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 145/315 (46%), Gaps = 20/315 (6%)
Query: 246 IENARTLFDEMGER-DEISWSAIIDGYIK---QRCFKEALEVFHQMQREKIKPSRHLLPS 301
+ NA T +G SWS I+ + + A+E+ + ++ P HLL
Sbjct: 5 VSNAFTTRSHVGSTASSNSWSTIVPALARFGSIGVLRAAVELINDGEKPDASPLVHLL-- 62
Query: 302 MLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVRE 361
V N G + R +H +V ++ + L +L+ Y L+ A +VF++M +
Sbjct: 63 --RVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPD 120
Query: 362 VSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFN 421
V +WN+++ G GR ++ + LF +++ PN +F L ACA + G + +
Sbjct: 121 VISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHS 180
Query: 422 SMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNV 481
+ ++ + + C++D+ G+ G +++A + M K V+ W A++ +C +G +
Sbjct: 181 KLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVS-WNAIVASCSRNGKL 239
Query: 482 ELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMD- 540
ELG W M ++ Y L + + K+G +++ +V M P SS +
Sbjct: 240 ELGL---WFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPN------PNSSSWNT 290
Query: 541 -MGGKVHEFKMGDSS 554
+ G V+ K G+++
Sbjct: 291 ILTGYVNSEKSGEAT 305
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 137/485 (28%), Positives = 237/485 (48%), Gaps = 30/485 (6%)
Query: 82 TLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPT---LF 138
T A +F ++ N + +NG HKA + + K +V +KF+ T +
Sbjct: 446 TQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLF-KEVVSEYSCSKFSLSTVLAIL 504
Query: 139 KACAVTGSVKEGVQFHAFVVKQG-------------LTGDVHIKSAGIQMYASFGLFRE- 184
+C + S+ G H ++ K G T D+ ++ I AS G E
Sbjct: 505 TSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLES 564
Query: 185 --ARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSW-----NAMI 237
A + + GK + D+I I G V F + K++ N +I
Sbjct: 565 LRAFQAMSREGKIRHDLITLLGTISASGNLGLV-LQGRCFHGLAIKSLRELDTQLQNTLI 623
Query: 238 SGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRH 297
+ RC IE+A +F + + + SW+ +I + + +E ++F + K++P+
Sbjct: 624 TMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL---KLEPNEI 680
Query: 298 LLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKM 357
+L+ +GS G H + R Q + + AL+DMY CG L+ +VF
Sbjct: 681 TFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNS 740
Query: 358 KVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKR-KPNGVTFVGVLNACAHAGMVERG 416
V +S WN++I HG E AM+LF +++ +PN +F+ +L+AC+H+G ++ G
Sbjct: 741 GVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEG 800
Query: 417 LGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACR 476
L + M+ + ++P EH +VD+LGRAG + EA +FI + VWGALL+AC
Sbjct: 801 LSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACN 860
Query: 477 IHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGS 536
HG+ +LG+ V +L +MEP N+ Y L+N Y G W++ R+RK++++ ++ +PG
Sbjct: 861 YHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGY 920
Query: 537 SMMDM 541
S++D+
Sbjct: 921 SVIDV 925
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 171/405 (42%), Gaps = 49/405 (12%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSI 107
+ H LK D S LL Y ++ +FD + +V V N +
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTG--ELVSSSCLFDELKEKDVIVWNSMITALN 164
Query: 108 ENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVH 167
+NG A+ + +M+ + + T A + ++ H ++ GL GD
Sbjct: 165 QNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSS 224
Query: 168 IKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM-- 225
+ +A + +YA A + D++ WN ++ L G + + F +M
Sbjct: 225 LCNALMNLYAKGENLSSAECVFTH--MEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTG 282
Query: 226 ---------------------------------------PDKNVGSWNAMISGLARCGMI 246
P+ +V N++IS ++CG
Sbjct: 283 SGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDT 342
Query: 247 ENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQR-EKIKPSRHLLPSMLTV 305
E A T+F+E+ RD IS +AI++G+ F+EA + +QMQ +KI+P + S+ ++
Sbjct: 343 EAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSI 402
Query: 306 CANVGSLDQGRWIHSFVERNSIQVDAV-LGTALIDMYVKCGRLDMAWEVFEKMKVREVST 364
C ++ +GR +H + R +Q A+ + ++IDMY KCG A +F+ R++ +
Sbjct: 403 CGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVS 462
Query: 365 WNAMIGGLAIHGRAEDAMKLFTKMNGEK--RKPNGVTFVGVLNAC 407
WN+MI + +G A LF ++ E K + T + +L +C
Sbjct: 463 WNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSC 507
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 100/472 (21%), Positives = 200/472 (42%), Gaps = 74/472 (15%)
Query: 51 HAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENG 110
H + ++T D + L+ YA N + A VF + ++ N + + NG
Sbjct: 211 HCLAIETGLVGDSSLCNALMNLYAKGE--NLSSAECVFTHMEHRDIVSWNTIMTKCLANG 268
Query: 111 EPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKS 170
P K++ + M + T+ + AC+ + G H V+K G + + H+
Sbjct: 269 HPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSV 328
Query: 171 AG--IQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLK----------------- 211
I MY+ G A + +E DVI NA+++G+
Sbjct: 329 GNSIISMYSKCGDTEAAETVFEE--LVCRDVISSNAILNGFAANGMFEEAFGILNQMQSV 386
Query: 212 ----------------CGEVEAANE--------VFVNMPDKNVGSWNAMISGLARCGMIE 247
CG++ + E V + M + + N++I +CG+
Sbjct: 387 DKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTT 446
Query: 248 NARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREK--IKPSRHLLPSMLTV 305
A LF RD +SW+++I + + +A +F ++ E K S + ++LT
Sbjct: 447 QAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTS 506
Query: 306 CANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKM-KVREVST 364
C + SL G+ +H +++ K G L A+ E M + R++++
Sbjct: 507 CDSSDSLIFGKSVHCWLQ-------------------KLGDLTSAFLRLETMSETRDLTS 547
Query: 365 WNAMIGGLAIHGRAEDAMKLFTKMNGE-KRKPNGVTFVGVLNACAHAGMVERGLGLFN-S 422
WN++I G A G ++++ F M+ E K + + +T +G ++A + G+V +G +
Sbjct: 548 WNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLA 607
Query: 423 MKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNA 474
+K + E++ ++++ ++ + GR +E A K + + PN+ W +++A
Sbjct: 608 IKSLRELDTQLQN--TLITMYGRCKDIESAVK-VFGLISDPNLCSWNCVISA 656
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 157/368 (42%), Gaps = 45/368 (12%)
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCG 213
H F +K GL D+ S + Y G + + DE + DVI WN+MI + G
Sbjct: 110 HCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDE--LKEKDVIVWNSMITALNQNG 167
Query: 214 EVEAANEVFVNMPDKN------------------------------------VGS---WN 234
AA +F+ M K VG N
Sbjct: 168 RYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCN 227
Query: 235 AMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKP 294
A+++ A+ + +A +F M RD +SW+ I+ + +++L+ F M +
Sbjct: 228 ALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEA 287
Query: 295 SRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDA--VLGTALIDMYVKCGRLDMAWE 352
+++ C+++ L G +H V ++ +A +G ++I MY KCG + A
Sbjct: 288 DTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAET 347
Query: 353 VFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNG-EKRKPNGVTFVGVLNACAHAG 411
VFE++ R+V + NA++ G A +G E+A + +M +K +P+ T V + + C
Sbjct: 348 VFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLS 407
Query: 412 MVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGAL 471
G + R+ +E V+D+ G+ GL +AE ++ + V+ W ++
Sbjct: 408 FSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVS-WNSM 466
Query: 472 LNACRIHG 479
++A +G
Sbjct: 467 ISAFSQNG 474
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 169/383 (44%), Gaps = 37/383 (9%)
Query: 175 MYASFGLFREARK--MLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGS 232
M +SF R+ + M+ +T V C+ LKCG ++ ++ +
Sbjct: 83 MESSFMFLRDVLRSFMMRTETETPRSVHCFA------LKCGLLQ------------DLAT 124
Query: 233 WNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKI 292
+ +++ R G + ++ LFDE+ E+D I W+++I + + A+ +F +M +
Sbjct: 125 SSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGN 184
Query: 293 KPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWE 352
+ L + +++ + +H + D+ L AL+++Y K L A
Sbjct: 185 EFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAEC 244
Query: 353 VFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGM 412
VF M+ R++ +WN ++ +G +++ F M G ++ + VTF V++AC+
Sbjct: 245 VFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEE 304
Query: 413 VERGLGLFN-SMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGAL 471
+ G L +K Y E + ++ + + G E AE E + + +V A+
Sbjct: 305 LTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCR-DVISSNAI 363
Query: 472 LNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNI----------YAKAGRWDDVARV 521
LN +G E E G IL M+ + + + + + +++ GR V
Sbjct: 364 LNGFAANGMFE--EAFG-ILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTV 420
Query: 522 RKLMKERGIETVPGSSMMDMGGK 544
R M+ R +E + +S++DM GK
Sbjct: 421 RMEMQSRALEVI--NSVIDMYGK 441
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 137/518 (26%), Positives = 249/518 (48%), Gaps = 50/518 (9%)
Query: 73 YANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKF 132
+ N NN A +FD +P +V N + G + G I + M RP +F
Sbjct: 81 FKNGYLNN---ALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEF 137
Query: 133 TYPTLFKACAVTGSVKEGVQFHAFVVKQGLTG-DVHIKSAGIQMYASFGLFREARKMLDE 191
T+ L ++ V+ G Q H + G++ ++ + ++ + MY G+F A +
Sbjct: 138 TFSIL---ASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVF-- 192
Query: 192 SGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM------PDKNVGSW------------ 233
DV+ WN +I G E A + F M PD+ S
Sbjct: 193 LTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELS 252
Query: 234 ----------------NAMISG-----LARCGMIENARTLFDEMGERDEISWSAIIDGYI 272
N+++ G ++C ++++ LF E+ + D + +++I Y
Sbjct: 253 KGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYS 312
Query: 273 KQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAV 332
C ++AL +F + ++P + S+L+ N LD G +HS V + +D
Sbjct: 313 WHCCGEDALRLFILAMTQSVRPDKFTFSSVLS-SMNAVMLDHGADVHSLVIKLGFDLDTA 371
Query: 333 LGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKM-NGE 391
+ T+L++MY K G +D+A VF K +++ WN +I GLA + RA +++ +F ++ +
Sbjct: 372 VATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQ 431
Query: 392 KRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEE 451
KP+ VT +G+L AC +AG V G+ +F+SM++ + + P EH+ C+++LL R G++ E
Sbjct: 432 SLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINE 491
Query: 452 AEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAK 511
A+ + +P +P+ +W +L A G+ L E V +L+ EP++S Y +L IY
Sbjct: 492 AKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEM 551
Query: 512 AGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFK 549
RW++ ++R M E +++ GSS + + V F+
Sbjct: 552 TWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSFE 589
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 114/217 (52%), Gaps = 8/217 (3%)
Query: 203 NAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEI 262
N + Y K G V A ++F ++PDKN +WN + GL + G + NA LFDEM ERD +
Sbjct: 43 NRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVV 102
Query: 263 SWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSR---HLLPSMLTVCANVGSLDQGRWIH 319
SW+ +I G + + + VF MQR +I+P+ +L S++T C G G I
Sbjct: 103 SWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVT-CVRHGEQIHGNAIC 161
Query: 320 SFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAE 379
S V R ++ V+ +++DMY + G D A VF M+ R+V +WN +I + G E
Sbjct: 162 SGVSRYNL----VVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKE 217
Query: 380 DAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERG 416
A+ F M + +P+ T V++ C+ + +G
Sbjct: 218 VALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKG 254
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 153/356 (42%), Gaps = 71/356 (19%)
Query: 129 PNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKM 188
P+ + L ++ S HA +++ G + + +Q+Y G A ++
Sbjct: 2 PSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQL 61
Query: 189 LDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIEN 248
D+ T I WN + G K G + A ++F MP+++V SWN MISGL CG E
Sbjct: 62 FDDIPDKNT--ITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEY 119
Query: 249 ARTLFDEM------------------------GER-------------DEISWSAIIDGY 271
+F +M GE+ + + W++++D Y
Sbjct: 120 GIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMY 179
Query: 272 IKQRCFKEALEVFHQMQ------------------------------RE-KIKPSRHLLP 300
+ F AL VF M+ RE +I+P + +
Sbjct: 180 RRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVS 239
Query: 301 SMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR 360
++++C+++ L +G+ + + ++++ A IDM+ KC RLD + ++F +++
Sbjct: 240 MVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKW 299
Query: 361 EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERG 416
+ N+MIG + H EDA++LF + +P+ TF VL++ +A M++ G
Sbjct: 300 DSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSS-MNAVMLDHG 354
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 206 bits (525), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 129/401 (32%), Positives = 198/401 (49%), Gaps = 16/401 (3%)
Query: 268 IDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSI 327
D Q ++EA+EV ++ + L + +C +L+ R +H +
Sbjct: 91 FDSLCIQGNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVS 150
Query: 328 QVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTK 387
D A+I+MY C +D A +VFE+M T M+ +G E+A+ LFT+
Sbjct: 151 PCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTR 210
Query: 388 MNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAG 447
E KPNG F V + C G V+ G F +M R Y I P MEH+ V +L +G
Sbjct: 211 FKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSG 270
Query: 448 LVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSN 507
++EA F+E MP++P+V VW L+N R+HG+VELG+R ++ E ++ R +S+
Sbjct: 271 HLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELV---EKLDATRLDKVSS 327
Query: 508 IYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEK 567
A + D + KE + P F+ DSSHPQM IY L
Sbjct: 328 AGLVATKASDFVK-----KEPSTRSEPYF--------YSTFRPVDSSHPQMNIIYETLMS 374
Query: 568 MMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRV 627
+ +L+ GY P+T I E + + + E+IA+ LL +KP + + ++ N+R+
Sbjct: 375 LRSQLKEMGYVPDTRYYRSLIMAMENKEQIFGYREEIAVVESLLKSKPRSAITLLTNIRI 434
Query: 628 CADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
DCH KL+S I G ++I RD YH FKNG+C C + W
Sbjct: 435 VGDCHDMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 134/400 (33%), Positives = 209/400 (52%), Gaps = 15/400 (3%)
Query: 269 DGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQ 328
D KQ +EALEV ++ + L + +C V +L++ R +H +
Sbjct: 85 DALCKQVKIREALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCI----TP 140
Query: 329 VDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKM 388
+DA +I+MY C D A VF +M R TW MI LA +G E A+ +FT+
Sbjct: 141 LDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRF 200
Query: 389 NGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGL 448
E KP+ F V AC G + GL F SM R Y + ME + V+++L G
Sbjct: 201 IEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGH 260
Query: 449 VEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNI 508
++EA F+E M V+P+V +W L+N C + G +ELG+R ++ + ++ R + SN
Sbjct: 261 LDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKL---DASRMSKESNA 317
Query: 509 YAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKM 568
A + D A + KL + R + + D ++HEF+ GD+SH + L+
Sbjct: 318 GLVAAKASDSA-MEKLKELRYCQMIRD----DPKKRMHEFRAGDTSHLGTVSAFRSLKVQ 372
Query: 569 MDKLQIEGYSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLHIVKNLRVC 628
M L I G+ P T + +EEEEKE L S K+A A +++++ L +++N+R C
Sbjct: 373 M--LDI-GFVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRPLTVLQNMRTC 429
Query: 629 ADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
D H+ FK++S I G +I RD+ +YH +KNG+CSCKD+W
Sbjct: 430 IDGHNTFKMISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 82/173 (47%), Gaps = 5/173 (2%)
Query: 212 CGEVEAANEVFV---NMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAII 268
CGEVEA E V + + S++ +I + C ++A +F+EM +R+ +W +I
Sbjct: 122 CGEVEALEEARVVHDCITPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMI 181
Query: 269 DGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQ 328
K + A+++F + E KP + + ++ C ++G +++G + R+
Sbjct: 182 RCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGM 241
Query: 329 VDAVLGTA-LIDMYVKCGRLDMAWEVFEKMKVR-EVSTWNAMIGGLAIHGRAE 379
V ++ +I+M CG LD A + E+M V V W ++ + G E
Sbjct: 242 VLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLE 294
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 124/430 (28%), Positives = 201/430 (46%), Gaps = 43/430 (10%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSI 107
+Q H +++K + L+ YA N + FD I N+ N L G
Sbjct: 336 RQIHGMLIKNGCETGIVLGNALIDFYAKCG--NLEDSRLCFDYIRDKNIVCWNALLSGYA 393
Query: 108 ENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVH 167
P +S + +M+ + RP ++T+ T K+C VT E Q H+ +V+ G + +
Sbjct: 394 NKDGP-ICLSLFLQMLQMGFRPTEYTFSTALKSCCVT----ELQQLHSVIVRMGYEDNDY 448
Query: 168 IKSAGIQMYASFGLFREARKMLD-ESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMP 226
+ S+ ++ YA L +A +LD SG T
Sbjct: 449 VLSSLMRSYAKNQLMNDALLLLDWASGPT------------------------------- 477
Query: 227 DKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQ 286
+V N + +R G + L + + D +SW+ I + +E +E+F
Sbjct: 478 --SVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKH 535
Query: 287 MQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQ-VDAVLGTALIDMYVKCG 345
M + I+P ++ S+L++C+ + L G IH + + D + LIDMY KCG
Sbjct: 536 MLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCG 595
Query: 346 RLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLN 405
+ +VFE+ + + + TW A+I L IHG ++A++ F + KP+ V+F+ +L
Sbjct: 596 SIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILT 655
Query: 406 ACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNV 465
AC H GMV+ G+GLF MK Y +EPEM+H+ C VDLL R G ++EAE I MP +
Sbjct: 656 ACRHGGMVKEGMGLFQKMKD-YGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADA 714
Query: 466 AVWGALLNAC 475
VW L+ C
Sbjct: 715 PVWRTFLDGC 724
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 120/502 (23%), Positives = 198/502 (39%), Gaps = 77/502 (15%)
Query: 43 SLQHLKQAHA--IILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCN 100
S K HA I L + +V ++ Y +LA KVFD +P N N
Sbjct: 27 SFARTKALHALSITLCSVLLQPVYVCNNIISLY--EKLGEVSLAGKVFDQMPERNKVSFN 84
Query: 101 IYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQ 160
+KG + G+ KA + +M PN+ T L +CA + V+ G Q H +K
Sbjct: 85 TIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL-SCA-SLDVRAGTQLHGLSLKY 142
Query: 161 GL-TGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMID-----GYLK--- 211
GL D + + + +Y L A ++ ++ + WN M+ G+LK
Sbjct: 143 GLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLET--WNHMMSLLGHRGFLKECM 200
Query: 212 ---------------------------CGEVEAANEVFVNMPDKN----VGSWNAMISGL 240
+++ + ++ + K + N++IS
Sbjct: 201 FFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAY 260
Query: 241 ARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLP 300
+CG A +F + G D +SW+AII K +AL++F M P++
Sbjct: 261 GKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYV 320
Query: 301 SMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR 360
S+L V + V L GR IH + +N + VLG ALID Y KCG L+ + F+ ++ +
Sbjct: 321 SVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDK 380
Query: 361 EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACA-------HAGMV 413
+ WNA++ G A + + LF +M +P TF L +C H+ +V
Sbjct: 381 NIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIV 439
Query: 414 ERGLG----LFNSMKRVYEIEPEMEH----------------FGCVVDLLGRAGLVEEAE 453
G + +S+ R Y M V + R G E+
Sbjct: 440 RMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESV 499
Query: 454 KFIESMPVKPNVAVWGALLNAC 475
K I ++ +P+ W + AC
Sbjct: 500 KLISTLE-QPDTVSWNIAIAAC 520
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 92/459 (20%), Positives = 183/459 (39%), Gaps = 47/459 (10%)
Query: 25 SKLSQKTVLDILNK-KCFHSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTL 83
+ L++ + L +L C L KQ H K + V +L+ Y N +
Sbjct: 211 ASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCG--NTHM 268
Query: 84 ATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAV 143
A ++F ++ N + + ++ P KA+ + M PN+ TY ++ ++
Sbjct: 269 AERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSL 328
Query: 144 TGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWN 203
+ G Q H ++K G +T ++ N
Sbjct: 329 VQLLSCGRQIHGMLIKNG---------------------------------CETGIVLGN 355
Query: 204 AMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLA-RCGMIENARTLFDEMGERDEI 262
A+ID Y KCG +E + F + DKN+ WNA++SG A + G I +LF +M +
Sbjct: 356 ALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPI--CLSLFLQMLQMGFR 413
Query: 263 SWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFV 322
+K C E ++ + R + + ++L S++ A ++ + +
Sbjct: 414 PTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWA 473
Query: 323 E--RNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAED 380
+ + ++ V G +Y + G+ + ++ ++ + +WN I + E+
Sbjct: 474 SGPTSVVPLNIVAG-----IYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEE 528
Query: 381 AMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVV 440
++LF M +P+ TFV +L+ C+ + G + + + + ++
Sbjct: 529 VIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLI 588
Query: 441 DLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHG 479
D+ G+ G + K E K N+ W AL++ IHG
Sbjct: 589 DMYGKCGSIRSVMKVFEETREK-NLITWTALISCLGIHG 626
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/285 (19%), Positives = 107/285 (37%), Gaps = 66/285 (23%)
Query: 44 LQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTL-------------------- 83
+ L+Q H++I++ + + +V +L++ YA N L
Sbjct: 428 VTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAG 487
Query: 84 ----------ATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFT 133
+ K+ + +P+ NI + + + I + M+ N RP+K+T
Sbjct: 488 IYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYT 547
Query: 134 YPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESG 193
+ ++ C+ + G H + K +
Sbjct: 548 FVSILSLCSKLCDLTLGSSIHGLITKTDFSC----------------------------- 578
Query: 194 KTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLF 253
D N +ID Y KCG + + +VF +KN+ +W A+IS L G + A F
Sbjct: 579 ---ADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKF 635
Query: 254 DE---MGER-DEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKP 294
E +G + D +S+ +I+ KE + +F +M+ ++P
Sbjct: 636 KETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEP 680
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 89/183 (48%), Gaps = 21/183 (11%)
Query: 301 SMLTVCANVGSLDQGRWIHSF-VERNSIQVDAV-LGTALIDMYVKCGRLDMAWEVFEKMK 358
S+L VC S + + +H+ + S+ + V + +I +Y K G + +A +VF++M
Sbjct: 17 SLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMP 76
Query: 359 VREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACA----HAGMVE 414
R ++N +I G + +G + A +F++M PN T G+L +CA AG
Sbjct: 77 ERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL-SCASLDVRAGTQL 135
Query: 415 RGL----GLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGA 470
GL GLF + V C++ L GR L+E AE+ E MP K ++ W
Sbjct: 136 HGLSLKYGLFMADAFVGT---------CLLCLYGRLDLLEMAEQVFEDMPFK-SLETWNH 185
Query: 471 LLN 473
+++
Sbjct: 186 MMS 188
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 122/498 (24%), Positives = 228/498 (45%), Gaps = 80/498 (16%)
Query: 48 KQAHAIILKTA-HFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGS 106
KQ H++++K+ + + FV+ L+ Y+ + + + + F+ +P +V N +
Sbjct: 233 KQLHSLVVKSGWNISNIFVANVLVDYYSACG--DLSGSMRSFNAVPEKDVISWNSIVSVC 290
Query: 107 IENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGL-TGD 165
+ G ++ + KM RP+ + + C+ ++ G Q H +V+K G
Sbjct: 291 ADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSS 350
Query: 166 VHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM 225
+H++SA I MY KC +E + ++ ++
Sbjct: 351 LHVQSALIDMYG---------------------------------KCNGIENSALLYQSL 377
Query: 226 PDKNVGSWNAMISGLARCGMIENARTLF----DEMGERDEISWSAIIDGYIKQRCFKEAL 281
P N+ N++++ L CG+ ++ +F DE DE++ S ++
Sbjct: 378 PCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVL------------- 424
Query: 282 EVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMY 341
K LP L C +H ++ D + +LID Y
Sbjct: 425 -----------KALSLSLPESLHSCT---------LVHCCAIKSGYAADVAVSCSLIDAY 464
Query: 342 VKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFV 401
K G+ +++ +VF+++ + ++I G A +G D +K+ +M+ P+ VT +
Sbjct: 465 TKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTIL 524
Query: 402 GVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPV 461
VL+ C+H+G+VE G +F+S++ Y I P + + C+VDLLGRAGLVE+AE+ +
Sbjct: 525 SVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARG 584
Query: 462 KPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWD----- 516
+ W +LL +CRIH N +G R +L+++EP N Y +S Y + G ++
Sbjct: 585 DADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQI 644
Query: 517 -DVARVRKLMKERGIETV 533
++A R+LM+E G +V
Sbjct: 645 REIAASRELMREIGYSSV 662
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 125/578 (21%), Positives = 237/578 (41%), Gaps = 114/578 (19%)
Query: 6 TNFPSGLKPIELSSDQAP----SSKLSQKTVLDILNKKCFHSLQHLKQAHAIILKTAHFH 61
+ + L+ IEL ++ S + +VL + + + F + Q H ++
Sbjct: 88 SRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELF--CREGIQVHCRVISLGFGC 145
Query: 62 DHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHK 121
+ FV L+ YA + +A K+FD + N+ VCN+ L+ + GE + Y +
Sbjct: 146 NMFVRSALVGLYACLRLVD--VALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLR 203
Query: 122 MMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGL 181
M + N TY + + C+ V EG Q H+ VVK
Sbjct: 204 MELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVK---------------------- 241
Query: 182 FREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLA 241
SG +++ N ++D Y CG++ + F +P+K+V SWN+++S A
Sbjct: 242 ----------SGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCA 291
Query: 242 RCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPS 301
+ +++D +L++F +MQ +PS S
Sbjct: 292 ---------------------DYGSVLD----------SLDLFSKMQFWGKRPSIRPFMS 320
Query: 302 MLTVCANVGSLDQGRWIHSFVERNSIQVDAV-LGTALIDMYVKCGRLDMAWEVFEKMKVR 360
L C+ + G+ IH +V + V ++ + +ALIDMY KC ++ + +++ +
Sbjct: 321 FLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCL 380
Query: 361 EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNA-------------- 406
+ N+++ L G +D +++F M E + VT VL A
Sbjct: 381 NLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTL 440
Query: 407 ---CA----HAGMVERGLGLFNSM---------KRVYEIEPEMEHFGCVVDLL---GRAG 447
CA +A V L ++ ++V++ E + + C+ ++ R G
Sbjct: 441 VHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFD-ELDTPNIFCLTSIINGYARNG 499
Query: 448 LVEEAEKFI---ESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGR--Y 502
+ + K + + M + P+ ++L+ C G VE GE + L + GR Y
Sbjct: 500 MGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLY 559
Query: 503 ALLSNIYAKAGRWDDVARVRKLMKERG-IETVPGSSMM 539
A + ++ +AG + R+ L++ RG + V SS++
Sbjct: 560 ACMVDLLGRAGLVEKAERL--LLQARGDADCVAWSSLL 595
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/382 (20%), Positives = 158/382 (41%), Gaps = 65/382 (17%)
Query: 80 NFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFK 139
N A + FD + +V N+ + G+ G +AI Y +M+ R + T+P++
Sbjct: 61 NLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLS 120
Query: 140 ACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDV 199
C+ +EG+Q H V+ G ++ ++S A GL+ R
Sbjct: 121 VCSDELFCREGIQVHCRVISLGFGCNMFVRS------ALVGLYACLRL------------ 162
Query: 200 ICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGER 259
V+ A ++F M D+N+ N ++ RC F + GE
Sbjct: 163 ---------------VDVALKLFDEMLDRNLAVCNLLL----RC---------FCQTGES 194
Query: 260 DEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIH 319
K EV+ +M+ E + + M+ C++ + +G+ +H
Sbjct: 195 ------------------KRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLH 236
Query: 320 SFVERNSIQVDAV-LGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRA 378
S V ++ + + + L+D Y CG L + F + ++V +WN+++ A +G
Sbjct: 237 SLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSV 296
Query: 379 EDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGC 438
D++ LF+KM ++P+ F+ LN C+ ++ G + + ++ +
Sbjct: 297 LDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSA 356
Query: 439 VVDLLGRAGLVEEAEKFIESMP 460
++D+ G+ +E + +S+P
Sbjct: 357 LIDMYGKCNGIENSALLYQSLP 378
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 124/256 (48%), Gaps = 1/256 (0%)
Query: 226 PDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFH 285
P V + N I L + G + +A FDEM RD ++++ +I G + C A+E++
Sbjct: 42 PSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYA 101
Query: 286 QMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCG 345
+M ++ S PS+L+VC++ +G +H V + + +AL+ +Y
Sbjct: 102 EMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLR 161
Query: 346 RLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLN 405
+D+A ++F++M R ++ N ++ G ++ +++ +M E NG+T+ ++
Sbjct: 162 LVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIR 221
Query: 406 ACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNV 465
C+H +V G L + + + + +VD G + + + ++P K +V
Sbjct: 222 GCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEK-DV 280
Query: 466 AVWGALLNACRIHGNV 481
W ++++ C +G+V
Sbjct: 281 ISWNSIVSVCADYGSV 296
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 112/250 (44%), Gaps = 10/250 (4%)
Query: 26 KLSQKTVLDILNKKCFHSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLAT 85
+++ TVL L+ SL H +K+ + D VS +L+ Y N ++
Sbjct: 417 EVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNE--VSR 474
Query: 86 KVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTG 145
KVFD + PN+F + G NG + +M +N P++ T ++ C+ +G
Sbjct: 475 KVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSG 534
Query: 146 SVKEG-VQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNA 204
V+EG + F + K G++ + + + + GL +A ++L ++ + D + W++
Sbjct: 535 LVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQA-RGDADCVAWSS 593
Query: 205 MIDG-YLKCGEV--EAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERD- 260
++ + E A EV +N+ +N + + G E +R + + R+
Sbjct: 594 LLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASREL 653
Query: 261 --EISWSAII 268
EI +S+++
Sbjct: 654 MREIGYSSVV 663
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 206/428 (48%), Gaps = 44/428 (10%)
Query: 87 VFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGS 146
+FD + PNVFV N K + + + Y + P+ F++P + K+
Sbjct: 62 IFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAG---- 117
Query: 147 VKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDE-SGKTQTDVICWNAM 205
+ G+ F A V K G D ++++ + MY ARK+ D+ S + +D WN M
Sbjct: 118 -RFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSD---WNVM 173
Query: 206 IDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWS 265
I GY K G E A ++F MP+ +V SW MI+G A+ +ENAR FD M E+ +SW+
Sbjct: 174 ISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWN 233
Query: 266 AIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERN 325
A++ GY + ++AL +F+ M R ++P+ +++ C+ R + ++
Sbjct: 234 AMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEK 293
Query: 326 SIQVDAVLGTALIDMYVKC--------------------------------GRLDMAWEV 353
++++ + TAL+DM+ KC G + A ++
Sbjct: 294 RVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQL 353
Query: 354 FEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKM-NGEKRKPNGVTFVGVLNACAHAGM 412
F+ M R V +WN++I G A +G+A A++ F M + KP+ VT + VL+AC H
Sbjct: 354 FDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMAD 413
Query: 413 VERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALL 472
+E G + + +++ +I+ + ++ + R G + EA++ + M + +V + L
Sbjct: 414 LELGDCIVDYIRK-NQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER-DVVSYNTLF 471
Query: 473 NACRIHGN 480
A +G+
Sbjct: 472 TAFAANGD 479
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 180/362 (49%), Gaps = 41/362 (11%)
Query: 84 ATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAV 143
A K FD +P +V N L G +NG A+ ++ M+ L RPN+ T+ + AC+
Sbjct: 217 ARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACS- 275
Query: 144 TGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWN 203
F LT R K++DE + + +
Sbjct: 276 ------------FRADPSLT-------------------RSLVKLIDEK-RVRLNCFVKT 303
Query: 204 AMIDGYLKCGEVEAANEVFVNM-PDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEI 262
A++D + KC ++++A +F + +N+ +WNAMISG R G + +AR LFD M +R+ +
Sbjct: 304 ALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVV 363
Query: 263 SWSAIIDGYIKQRCFKEALEVFHQM-QREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSF 321
SW+++I GY A+E F M KP + S+L+ C ++ L+ G I +
Sbjct: 364 SWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDY 423
Query: 322 VERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDA 381
+ +N I+++ +LI MY + G L A VF++MK R+V ++N + A +G +
Sbjct: 424 IRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVET 483
Query: 382 MKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVD 441
+ L +KM E +P+ VT+ VL AC AG+++ G +F S++ P +H+ C +D
Sbjct: 484 LNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIR-----NPLADHYAC-MD 537
Query: 442 LL 443
LL
Sbjct: 538 LL 539
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/461 (26%), Positives = 198/461 (42%), Gaps = 48/461 (10%)
Query: 39 KCFHSLQHLKQ---AHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPN 95
K F L+Q HA+ +K F+ F+ +L+ Y LA +VFD I +
Sbjct: 222 KSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFK--CGKVGLARRVFDEIVERD 279
Query: 96 VFVCNIYLKGSIENGEPHKAISCYHKMMVLNS-RPNKFTYPTLFKACAVTGSVKEGVQFH 154
+ V + G N +A+ + M+ PN T+ ++K G + H
Sbjct: 280 IVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVH 339
Query: 155 AFVVK-QGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCG 213
A V+K + + S I +Y G R++ G Q + I W A++ GY G
Sbjct: 340 AHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVF--YGSKQRNAISWTALMSGYAANG 397
Query: 214 EVEAANEVFVNM------PD---------------------------------KNVGSWN 234
+ A V M PD NV
Sbjct: 398 RFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVT 457
Query: 235 AMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKP 294
+++ ++CG+ E LFD + +R+ +W+A+ID Y++ + +EVF M K +P
Sbjct: 458 SLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRP 517
Query: 295 SRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVF 354
+ +LTVC+++ +L G+ +H + + + + +I MY KCG L A F
Sbjct: 518 DSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSF 577
Query: 355 EKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVE 414
+ + V+ TW A+I + DA+ F +M PN TF VL+ C+ AG V+
Sbjct: 578 DAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVD 637
Query: 415 RGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKF 455
FN M R+Y ++P EH+ V++LL R G VEEA++
Sbjct: 638 EAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 139/545 (25%), Positives = 241/545 (44%), Gaps = 60/545 (11%)
Query: 31 TVLDILNKKCFH--SLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVF 88
T L + C SL H KQ H I + F+ L+ Y + A KVF
Sbjct: 112 TTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTA--CGSVKDAQKVF 169
Query: 89 DCIPRPNVFVCNIYLKGSIENGEP--HKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGS 146
D NV+ N L+G++ +G+ +S + +M L N ++ +FK+ A +
Sbjct: 170 DESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASA 229
Query: 147 VKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMI 206
+++G++ HA +K GL V +K++ + MY G AR++ DE + D++ W AMI
Sbjct: 230 LRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEI--VERDIVVWGAMI 287
Query: 207 DGYLK---------------------------------CGEVEA---ANEVFVN-MPDKN 229
G G+V+A EV + + KN
Sbjct: 288 AGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKN 347
Query: 230 VGSWNAMISGL----ARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFH 285
+ SGL +CG + + R +F +R+ ISW+A++ GY F +AL
Sbjct: 348 YVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIV 407
Query: 286 QMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCG 345
MQ+E +P + ++L VCA + ++ QG+ IH + +N + L T+L+ MY KCG
Sbjct: 408 WMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCG 467
Query: 346 RLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLN 405
+ +F++++ R V W AMI + +++F M K +P+ VT VL
Sbjct: 468 VPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLT 527
Query: 406 ACAHAGMVERGLGLFNS-MKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPN 464
C+ ++ G L +K+ +E P + ++ + G+ G + A +++ VK +
Sbjct: 528 VCSDLKALKLGKELHGHILKKEFESIPFVS--ARIIKMYGKCGDLRSANFSFDAVAVKGS 585
Query: 465 VAVWGALLNACRIHGNVELGERVGWILLDMEPR----NSGRYALLSNIYAKAGRWDDVAR 520
+ W A++ A +G EL M R N+ + + +I ++AG D+ R
Sbjct: 586 LT-WTAIIEA---YGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYR 641
Query: 521 VRKLM 525
LM
Sbjct: 642 FFNLM 646
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 183/402 (45%), Gaps = 53/402 (13%)
Query: 130 NKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKML 189
N T+ L +AC S+ G Q H + GL + +++ + MY + G ++A+K+
Sbjct: 110 NATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVF 169
Query: 190 DESGKTQTDVICWNAMIDGYLKCGEVEAAN--EVFVNMP----DKNVGSWNAMISGLA-- 241
DES T ++V WNA++ G + G+ + F M D NV S + + A
Sbjct: 170 DES--TSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGA 227
Query: 242 ---------------------------------RCGMIENARTLFDEMGERDEISWSAII 268
+CG + AR +FDE+ ERD + W A+I
Sbjct: 228 SALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMI 287
Query: 269 DGYIKQRCFKEALEVFHQM-QREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSI 327
G + EAL +F M EKI P+ +L ++L V +V +L G+ +H+ V ++
Sbjct: 288 AGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKN 347
Query: 328 QVD-AVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFT 386
V+ + + LID+Y KCG + VF K R +W A++ G A +GR + A++
Sbjct: 348 YVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIV 407
Query: 387 KMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLF-NSMKRVYEIEPEMEHFGCVVDLLGR 445
M E +P+ VT VL CA +++G + ++K ++ P + ++ + +
Sbjct: 408 WMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLF--LPNVSLVTSLMVMYSK 465
Query: 446 AGLVEEAEKFIESMPVKPNVAVWGALLNA----CRIHGNVEL 483
G+ E + + + + NV W A+++ C + +E+
Sbjct: 466 CGVPEYPIRLFDRLEQR-NVKAWTAMIDCYVENCDLRAGIEV 506
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 162/381 (42%), Gaps = 47/381 (12%)
Query: 11 GLKPIELSSDQAPSSKLSQKTVLDILNKKCFHSLQHLKQAHAIILKTAHFHDH-FVSGTL 69
GL +S ++ + + T+L +L +L+ K+ HA +LK+ ++ + FV L
Sbjct: 301 GLFRTMISEEKIYPNSVILTTILPVLGD--VKALKLGKEVHAHVLKSKNYVEQPFVHSGL 358
Query: 70 LKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRP 129
+ Y + +VF + N + G NG +A+ M RP
Sbjct: 359 IDLYCK--CGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRP 416
Query: 130 NKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKML 189
+ T T+ CA ++K+G + H + +K +V + ++ + MY+ G+ ++
Sbjct: 417 DVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLF 476
Query: 190 DESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM------PDK-NVGSWNAMISGL-- 240
D Q +V W AMID Y++ ++ A EVF M PD +G + S L
Sbjct: 477 DR--LEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKA 534
Query: 241 ------------------------------ARCGMIENARTLFDEMGERDEISWSAIIDG 270
+CG + +A FD + + ++W+AII+
Sbjct: 535 LKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEA 594
Query: 271 YIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQG-RWIHSFVERNSIQV 329
Y F++A+ F QM P+ ++L++C+ G +D+ R+ + + ++Q
Sbjct: 595 YGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQP 654
Query: 330 DAVLGTALIDMYVKCGRLDMA 350
+ +I++ +CGR++ A
Sbjct: 655 SEEHYSLVIELLNRCGRVEEA 675
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 22/216 (10%)
Query: 268 IDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSI 327
I + +Q + AL + +++ I + ++L C SL G+ +H + N +
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 328 QVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHG--RAEDAMKLF 385
+ + L T L+ MY CG + A +VF++ V +WNA++ G I G R +D + F
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTF 202
Query: 386 TKMNGEKRKPNGVTFVGVLNACAHAGMVERGL---------GLFNSMKRVYEIEPEMEHF 436
T+M N + V + A A + +GL GLFNS+ +
Sbjct: 203 TEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSL------- 255
Query: 437 GCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALL 472
VD+ + G V A + + + V+ ++ VWGA++
Sbjct: 256 ---VDMYFKCGKVGLARRVFDEI-VERDIVVWGAMI 287
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 115/474 (24%), Positives = 217/474 (45%), Gaps = 53/474 (11%)
Query: 42 HSLQHLKQAHAIILKTAHFHD---HFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFV 98
+ ++ +K+ HA+ LK F D +F + + C + A KVFD +P N
Sbjct: 96 NGMRLIKRIHAMALKC--FDDQVIYFGNNLISSCV---RLGDLVYARKVFDSMPEKNTVT 150
Query: 99 CNIYLKGSIENGEPHKAISCYHKMMVLNSR-PNKFTYPTLFKACAVTGSVKEGVQFHAFV 157
+ G ++ G +A + + + R N+ + L C+ + G Q H +
Sbjct: 151 WTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNM 210
Query: 158 VKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDG--------- 208
VK G+ G++ ++S+ + YA G A + D + DVI W A+I
Sbjct: 211 VKVGV-GNLIVESSLVYFYAQCGELTSALRAFDM--MEEKDVISWTAVISACSRKGHGIK 267
Query: 209 -----------------YLKCGEVEAANE-------------VFVNMPDKNVGSWNAMIS 238
+ C ++A +E V M +V +++
Sbjct: 268 AIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMD 327
Query: 239 GLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHL 298
A+CG I + R +FD M R+ ++W++II + ++ +EA+ +F M+R + +
Sbjct: 328 MYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLT 387
Query: 299 LPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMK 358
+ S+L C +VG+L G+ +H+ + +NSI+ + +G+ L+ +Y KCG A+ V +++
Sbjct: 388 VVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP 447
Query: 359 VREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLG 418
R+V +W AMI G + G +A+ +M E +PN T+ L ACA++ + G
Sbjct: 448 SRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRS 507
Query: 419 LFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALL 472
+ + K+ + + ++ + + G V EA + +SMP K N+ W A++
Sbjct: 508 IHSIAKKNHALSNVFVG-SALIHMYAKCGFVSEAFRVFDSMPEK-NLVSWKAMI 559
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 181/400 (45%), Gaps = 44/400 (11%)
Query: 48 KQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSI 107
+Q H ++K + V +L+ YA T A + FD + +V +
Sbjct: 204 RQVHGNMVKVG-VGNLIVESSLVYFYAQCG--ELTSALRAFDMMEEKDVISWTAVISACS 260
Query: 108 ENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVH 167
G KAI + M+ PN+FT ++ KAC+ +++ G Q H+ VVK+ + DV
Sbjct: 261 RKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVF 320
Query: 168 IKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLK---------------- 211
+ ++ + MYA G + RK+ D G + + + W ++I + +
Sbjct: 321 VGTSLMDMYAKCGEISDCRKVFD--GMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKR 378
Query: 212 ----------------CGEV-------EAANEVFVNMPDKNVGSWNAMISGLARCGMIEN 248
CG V E ++ N +KNV + ++ +CG +
Sbjct: 379 RHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRD 438
Query: 249 ARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCAN 308
A + ++ RD +SW+A+I G EAL+ +M +E ++P+ S L CAN
Sbjct: 439 AFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACAN 498
Query: 309 VGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAM 368
SL GR IHS ++N + +G+ALI MY KCG + A+ VF+ M + + +W AM
Sbjct: 499 SESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAM 558
Query: 369 IGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACA 408
I G A +G +A+KL +M E + + F +L+ C
Sbjct: 559 IMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCG 598
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 151/335 (45%), Gaps = 43/335 (12%)
Query: 185 ARKMLDESGKTQTDVICWNAMIDGYLKCG------------------------------- 213
ARK+ D + T + W AMIDGYLK G
Sbjct: 136 ARKVFDSMPEKNT--VTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNL 193
Query: 214 -----EVEAANEVFVNMPDKNVGSW---NAMISGLARCGMIENARTLFDEMGERDEISWS 265
E E +V NM VG+ ++++ A+CG + +A FD M E+D ISW+
Sbjct: 194 CSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWT 253
Query: 266 AIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERN 325
A+I ++ +A+ +F M P+ + S+L C+ +L GR +HS V +
Sbjct: 254 AVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKR 313
Query: 326 SIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLF 385
I+ D +GT+L+DMY KCG + +VF+ M R TW ++I A G E+A+ LF
Sbjct: 314 MIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLF 373
Query: 386 TKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGR 445
M N +T V +L AC G + G L + + IE + +V L +
Sbjct: 374 RIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIK-NSIEKNVYIGSTLVWLYCK 432
Query: 446 AGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGN 480
G +A ++ +P + +V W A+++ C G+
Sbjct: 433 CGESRDAFNVLQQLPSR-DVVSWTAMISGCSSLGH 466
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 140/326 (42%), Gaps = 47/326 (14%)
Query: 31 TVLDILNKKCFH--SLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVF 88
TV IL K C +L+ +Q H++++K D FV +L+ YA + KVF
Sbjct: 286 TVCSIL-KACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKC--GEISDCRKVF 342
Query: 89 DCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVK 148
D + N + G +AIS + M + N T ++ +AC G++
Sbjct: 343 DGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALL 402
Query: 149 EGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDG 208
G + HA ++K + +V+I S + +Y G R+A +L + DV+ W AMI G
Sbjct: 403 LGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQ--LPSRDVVSWTAMISG 460
Query: 209 YLKCGEVEAANEVFVNM------PD---------------------------------KN 229
G A + M P+ N
Sbjct: 461 CSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSN 520
Query: 230 VGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQR 289
V +A+I A+CG + A +FD M E++ +SW A+I GY + +EAL++ ++M+
Sbjct: 521 VFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEA 580
Query: 290 EKIKPSRHLLPSMLTVCANVGSLDQG 315
E + ++ ++L+ C ++ LD+
Sbjct: 581 EGFEVDDYIFATILSTCGDI-ELDEA 605
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 129/270 (47%), Gaps = 15/270 (5%)
Query: 234 NAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIK 293
N +IS R G + AR +FD M E++ ++W+A+IDGY+K EA +F + I+
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR 180
Query: 294 -PSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQV---DAVLGTALIDMYVKCGRLDM 349
+ + +L +C+ + GR +H N ++V + ++ ++L+ Y +CG L
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVHG----NMVKVGVGNLIVESSLVYFYAQCGELTS 236
Query: 350 AWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAH 409
A F+ M+ ++V +W A+I + G A+ +F M PN T +L AC+
Sbjct: 237 ALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSE 296
Query: 410 AGMVERGLGLFN-SMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVW 468
+ G + + +KR+ I+ ++ ++D+ + G + + K + M + N W
Sbjct: 297 EKALRFGRQVHSLVVKRM--IKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNR-NTVTW 353
Query: 469 GALLNACRIHGNVELGERVGWILLDMEPRN 498
+++ A H GE + M+ R+
Sbjct: 354 TSIIAA---HAREGFGEEAISLFRIMKRRH 380
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 99/228 (43%), Gaps = 25/228 (10%)
Query: 333 LGTALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTK-MNGE 391
G LI V+ G L A +VF+ M + TW AMI G +G ++A LF +
Sbjct: 119 FGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHG 178
Query: 392 KRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRV----YEIEPEMEHFGCVVDLLGRAG 447
R N FV +LN C+ E G + +M +V +E + +F + G
Sbjct: 179 IRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYF------YAQCG 232
Query: 448 LVEEAEKFIESMPVKPNVAVWGALLNAC--RIHGNVELGERVG----WILLDMEPRNSGR 501
+ A + + M K +V W A+++AC + HG +G +G W L + S
Sbjct: 233 ELTSALRAFDMMEEK-DVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSIL 291
Query: 502 YALLSNIYAKAGRWDDVARVRKLMKERGIET--VPGSSMMDMGGKVHE 547
A + GR +V L+ +R I+T G+S+MDM K E
Sbjct: 292 KACSEEKALRFGR-----QVHSLVVKRMIKTDVFVGTSLMDMYAKCGE 334
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 76/107 (71%)
Query: 562 YLMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGTTLHI 621
Y+ L+ + +++ GY P T V +DI+EE KE L HSE++A+AFG+++ PGTT+ +
Sbjct: 133 YVKLKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPGTTIRV 192
Query: 622 VKNLRVCADCHSAFKLVSKIYGHNIIMRDRVRYHHFKNGMCSCKDFW 668
+KNLR+C DCH+ K++S I II+RD R+HHF++G CSC D+W
Sbjct: 193 MKNLRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/450 (22%), Positives = 195/450 (43%), Gaps = 62/450 (13%)
Query: 78 FNNFTLATKVFDCIPR----PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFT 133
+ T+A ++F+ V+ + + +G +AIS ++ M RPN T
Sbjct: 246 YGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVT 305
Query: 134 YPTLFKACAVTG-SVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDE- 191
Y + AC G K+ +F + + G+ D ++ + + + GL+ AR + DE
Sbjct: 306 YNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEM 365
Query: 192 -SGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDK----NVGSWNAMISGLARCGMI 246
+ + + DV +N ++D K G+++ A E+ MP K NV S++ +I G A+ G
Sbjct: 366 TNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRF 425
Query: 247 ENARTLFDEMG----ERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSM 302
+ A LF EM D +S++ ++ Y K +EAL++ +M IK ++
Sbjct: 426 DEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNAL 485
Query: 303 LTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKV--- 359
L G D+ + + + ++R + + + + LID Y K G A E+F + K
Sbjct: 486 LGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGL 545
Query: 360 -REVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERG-- 416
+V ++A+I L +G A+ L +M E PN VT+ +++A + ++R
Sbjct: 546 RADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605
Query: 417 -------------------------LGLFNSM------KRVYEIEPEMEHFGCVVDLLGR 445
+ LF + + + E M+ C++++ +
Sbjct: 606 YSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRK 665
Query: 446 AGLVEEAEKFIESMPVKPNVAVWGALLNAC 475
+ + +KPNV + A+LNAC
Sbjct: 666 ----------MHQLEIKPNVVTFSAILNAC 685
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 149/315 (47%), Gaps = 25/315 (7%)
Query: 176 YASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVG---- 231
+ F + RE RK +E GK + AMI + G+V A +F G
Sbjct: 218 FYEFAVKRERRK--NEQGKLAS------AMISTLGRYGKVTIAKRIFETAFAGGYGNTVY 269
Query: 232 SWNAMISGLARCGMIENARTLFDEMGER----DEISWSAIIDGYIKQRC-FKEALEVFHQ 286
+++A+IS R G+ E A ++F+ M E + ++++A+ID K FK+ + F +
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDE 329
Query: 287 MQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGR 346
MQR ++P R S+L VC+ G + R + + I+ D L+D K G+
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 347 LDMAWEVFEKMKVRE----VSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVG 402
+D+A+E+ +M V+ V +++ +I G A GR ++A+ LF +M + V++
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 403 VLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMP-- 460
+L+ G E L + M V I+ ++ + ++ G+ G +E +K M
Sbjct: 450 LLSIYTKVGRSEEALDILREMASV-GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKRE 508
Query: 461 -VKPNVAVWGALLNA 474
V PN+ + L++
Sbjct: 509 HVLPNLLTYSTLIDG 523
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 165/395 (41%), Gaps = 49/395 (12%)
Query: 81 FTLATKVFDCIPR----PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPT 136
F K FD + R P+ N L G A + + +M + F+Y T
Sbjct: 320 FKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNT 379
Query: 137 LFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESG--K 194
L A G + + A + + + +V S I +A G F EA + E
Sbjct: 380 LLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG 439
Query: 195 TQTDVICWNAMIDGYLKCGEVEAANEVFVNMPD----KNVGSWNAMISGLARCGMIENAR 250
D + +N ++ Y K G E A ++ M K+V ++NA++ G + G + +
Sbjct: 440 IALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVK 499
Query: 251 TLFDEMGER----DEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSML-TV 305
+F EM + +++S +IDGY K +KEA+E+F + + ++ L +++ +
Sbjct: 500 KVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDAL 559
Query: 306 CAN--VGS-------LDQGRWIHSFVERNSIQVDAVLGTALIDM---YVKCGRLDMAWEV 353
C N VGS + + + V NSI +DA +A +D Y G L +
Sbjct: 560 CKNGLVGSAVSLIDEMTKEGISPNVVTYNSI-IDAFGRSATMDRSADYSNGGSLPFSSSA 618
Query: 354 FEKMKVREVSTWNAMIGGLAIHGR------AEDAMK-------LFTKMNGEKRKPNGVTF 400
+ E + + G L E+ M+ +F KM+ + KPN VTF
Sbjct: 619 LSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTF 678
Query: 401 VGVLNACAH------AGMVERGLGLFNSMKRVYEI 429
+LNAC+ A M+ L LF++ +VY +
Sbjct: 679 SAILNACSRCNSFEDASMLLEELRLFDN--KVYGV 711
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 118/260 (45%), Gaps = 22/260 (8%)
Query: 335 TALIDMYVKCGRLDMAWEVFEKMK---VR-EVSTWNAMIGGLAIHG-RAEDAMKLFTKMN 389
+ALI Y + G + A VF MK +R + T+NA+I G + K F +M
Sbjct: 272 SALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQ 331
Query: 390 GEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLV 449
+P+ +TF +L C+ G+ E LF+ M IE ++ + ++D + + G +
Sbjct: 332 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTN-RRIEQDVFSYNTLLDAICKGGQM 390
Query: 450 EEAEKFIESMPVK---PNVAVWGALLNACRIHGNVE-----LGE-RVGWILLDMEPRNSG 500
+ A + + MPVK PNV + +++ G + GE R I LD N+
Sbjct: 391 DLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT- 449
Query: 501 RYALLSNIYAKAGRWDDVARVRKLMKERGI--ETVPGSSMMDMGGKVHEFKMGDSSHPQM 558
L +IY K GR ++ + + M GI + V ++++ GK ++ +M
Sbjct: 450 ----LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM 505
Query: 559 KEIYLMLEKMMDKLQIEGYS 578
K +++ + I+GYS
Sbjct: 506 KREHVLPNLLTYSTLIDGYS 525
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 333 LGTALIDMYVKCGRLDMAWEVFEKMKV----REVSTWNAMIGGLAIHGRAEDAMKLFTKM 388
L +A+I + G++ +A +FE V ++A+I G E+A+ +F M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 389 NGEKRKPNGVTFVGVLNACAHAGMVERGLG-LFNSMKRVYEIEPEMEHFGCVVDLLGRAG 447
+PN VT+ V++AC GM + + F+ M+R ++P+ F ++ + R G
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQR-NGVQPDRITFNSLLAVCSRGG 353
Query: 448 LVEEAEKFIESMP---VKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPR----NSG 500
L E A + M ++ +V + LL+A G ++L IL M + N
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFE---ILAQMPVKRIMPNVV 410
Query: 501 RYALLSNIYAKAGRWDDVARVRKLMKERGI 530
Y+ + + +AKAGR+D+ + M+ GI
Sbjct: 411 SYSTVIDGFAKAGRFDEALNLFGEMRYLGI 440
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/469 (22%), Positives = 208/469 (44%), Gaps = 21/469 (4%)
Query: 81 FTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKA 140
L +V D PN+FV N + + + H+A + +M + RPN TY L
Sbjct: 352 LNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDM 411
Query: 141 CAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDE--SGKTQTD 198
G + + F +V GL V+ ++ I + FG A + E + K +
Sbjct: 412 FCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPT 471
Query: 199 VICWNAMIDGYLKCGEVEAANEVFVNMPDKNVG----SWNAMISGLARCGMIENARTLFD 254
V+ + +++ GY G++ A ++ M K + ++ ++SGL R G+I +A LF+
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFN 531
Query: 255 EMGE----RDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVG 310
EM E + ++++ +I+GY ++ +A E +M + I P + ++ G
Sbjct: 532 EMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTG 591
Query: 311 SLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVS----TWN 366
+ + + + + +++ + T L+ + + G+L+ A V ++M R V +
Sbjct: 592 QASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYG 651
Query: 367 AMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRV 426
+I G H + L +M+ KP+ V + +++A + G + G+++ M
Sbjct: 652 VLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE 711
Query: 427 YEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESM-PVK--PNVAVWGALLNACRIHGNVEL 483
+ E+ + V++ L +AG V EAE M PV PN +G L+ G V++
Sbjct: 712 GCVPNEVT-YTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDIL-TKGEVDM 769
Query: 484 GERVGW--ILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGI 530
+ V +L N+ Y +L + + GR ++ + + M G+
Sbjct: 770 QKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGV 818
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 165/378 (43%), Gaps = 31/378 (8%)
Query: 94 PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQF 153
P+++ L G G A+ +++M N +PN+ TY + + G + + +F
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLD--ESGKTQTDVICWNAMIDGYLK 211
+ ++G+ D + I G EA+ +D G + + IC+ ++ G+ +
Sbjct: 565 LKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624
Query: 212 CGEVEAANEVFVNMPDKNVG----SWNAMISGLARCGMIENARTLF----DEMGER---- 259
G++E A V M + V + +I G + R LF EM +R
Sbjct: 625 EGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG----SLKHKDRKLFFGLLKEMHDRGLKP 680
Query: 260 DEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIH 319
D++ ++++ID K FKEA ++ M E P+ +++ G +++ +
Sbjct: 681 DDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLC 740
Query: 320 SFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEV-----FEKMKVREVSTWNAMIGGLAI 374
S ++ S + V +D+ K G +DM V K + +T+N +I G
Sbjct: 741 SKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHNAILKGLLANTATYNMLIRGFCR 799
Query: 375 HGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPE-- 432
GR E+A +L T+M G+ P+ +T+ ++N V++ + L+NSM I P+
Sbjct: 800 QGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTE-KGIRPDRV 858
Query: 433 ----MEHFGCVVDLLGRA 446
+ H CV +G+A
Sbjct: 859 AYNTLIHGCCVAGEMGKA 876
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 107/549 (19%), Positives = 230/549 (41%), Gaps = 66/549 (12%)
Query: 94 PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQF 153
P V + L G ++ A+ ++ M+ + RP+ + Y + ++ + +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 154 HAFVVKQGLTGDVHIKSAGI---------QMYASFGLFREARKMLDESGKT-QTDVICWN 203
A + G DV+I + +++ + G+ + D +GK + DV+ +
Sbjct: 250 IAHMEATGC--DVNIVPYNVLIDGLCKKQKVWEAVGIKK------DLAGKDLKPDVVTYC 301
Query: 204 AMIDGYLKCGEVEAANEVFVNMP----DKNVGSWNAMISGLARCGMIENARTLFDEMGE- 258
++ G K E E E+ M + + ++++ GL + G IE A L + +
Sbjct: 302 TLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDF 361
Query: 259 ---RDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQG 315
+ ++A+ID K R F EA +F +M + ++P+ ++ + G LD
Sbjct: 362 GVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTA 421
Query: 316 RWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMA----WEVFEKMKVREVSTWNAMIGG 371
+ +++ +LI+ + K G + A E+ K V T+ +++GG
Sbjct: 422 LSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGG 481
Query: 372 LAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEP 431
G+ A++L+ +M G+ P+ TF +L+ AG++ + LFN M + ++P
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE-WNVKP 540
Query: 432 EMEHFGCVVDLLGRAGLVEEAEKFIESMPVK---PNVAVWGALLNACRIHGNVELGERVG 488
+ +++ G + +A +F++ M K P+ + L++ + G +
Sbjct: 541 NRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK--- 597
Query: 489 WILLDMEPR-----NSGRYALLSNIYAKAGRWDDVARVRKLMKERGI--ETVPGSSMMDM 541
+ +D + N Y L + + + G+ ++ V + M +RG+ + V ++D
Sbjct: 598 -VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLID- 655
Query: 542 GGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQHS 601
G H K + +L++M D+ G P+ + + I+ + K K+
Sbjct: 656 ---------GSLKHKDRKLFFGLLKEMHDR----GLKPDDVIYTSMIDAKSKTGDFKE-- 700
Query: 602 EKIALAFGL 610
AFG+
Sbjct: 701 -----AFGI 704
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 102/243 (41%), Gaps = 13/243 (5%)
Query: 97 FVC-NIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHA 155
VC + + GS+++ + +M +P+ Y ++ A + TG KE
Sbjct: 647 LVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWD 706
Query: 156 FVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQT--DVICWNAMIDGYLKCG 213
++ +G + +A I G EA + + + + + + +D K G
Sbjct: 707 LMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-G 765
Query: 214 EVEAANEV-----FVNMPDKNVGSWNAMISGLARCGMIENARTLFDEM-GE---RDEISW 264
EV+ V + N ++N +I G R G IE A L M G+ D I++
Sbjct: 766 EVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITY 825
Query: 265 SAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVER 324
+ +I+ ++ K+A+E+++ M + I+P R +++ C G + + + + + R
Sbjct: 826 TTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLR 885
Query: 325 NSI 327
+
Sbjct: 886 QGL 888
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/500 (23%), Positives = 224/500 (44%), Gaps = 33/500 (6%)
Query: 94 PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQF 153
P+VF N ++G E E KA+ ++M + T+ L A G + E + F
Sbjct: 175 PDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGF 234
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLD---ESGKTQTDVICWNAMIDGYL 210
+ GL D+ + ++ I+ + G + + D E G + I +N +I G+
Sbjct: 235 LKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPC-AITYNTLIRGFC 293
Query: 211 KCGEVEAANEVFVNMPDK----NVGSWNAMISGLARCGMIENARTLFDEMGERDE----I 262
K G+++ A+E+F M ++ NV ++ +I GL G + A L + M E+DE +
Sbjct: 294 KLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAV 353
Query: 263 SWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFV 322
+++ II+ K +A+E+ M++ + +P +L G LD+ + +
Sbjct: 354 TYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM 413
Query: 323 ERNS--IQVDAVLGTALIDMYVKCGRLDMAWEVF----EKMKVREVSTWNAMIGGLAIHG 376
++S D + ALI K RL A +++ EK+ + T N ++ G
Sbjct: 414 LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAG 473
Query: 377 RAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHF 436
AM+L+ +++ K N T+ +++ GM+ GL M RV E++P + +
Sbjct: 474 DVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKM-RVSELQPSVFDY 532
Query: 437 GCVVDLLGRAGLVEEAEKFIESMPVK---PNVAVWGALLNACRIHGNVELGER--VGWIL 491
C++ L + G +++A + E M P+V + +++ G+++ E VG
Sbjct: 533 NCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSR 592
Query: 492 LDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMG 551
+ P + Y+ L N + K G D+ M + G E P + + D V ++ +
Sbjct: 593 AGLSP-DLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFE--PDAHICD---SVLKYCIS 646
Query: 552 DSSHPQMKEIYLMLEKMMDK 571
++ E +++K++DK
Sbjct: 647 QGETDKLTE---LVKKLVDK 663
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/425 (21%), Positives = 181/425 (42%), Gaps = 21/425 (4%)
Query: 94 PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQF 153
P N ++G + G+ +A + M+ RPN +TY L G KE +Q
Sbjct: 280 PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQL 339
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLD--ESGKTQTDVICWNAMIDGYLK 211
++++ + + I GL +A ++++ + +T+ D I +N ++ G
Sbjct: 340 LNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCA 399
Query: 212 CGEVEAANEVFVNM------PDKNVGSWNAMISGLARCGMIENARTLFD----EMGERDE 261
G+++ A+++ M D +V S+NA+I GL + + A ++D ++G D
Sbjct: 400 KGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDR 459
Query: 262 ISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSF 321
++ + +++ +K +A+E++ Q+ KI + +M+ G L+ + +
Sbjct: 460 VTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCK 519
Query: 322 VERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMK----VREVSTWNAMIGGLAIHGR 377
+ + +Q L+ K G LD AW +FE+M+ +V ++N MI G G
Sbjct: 520 MRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGD 579
Query: 378 AEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFG 437
+ A L M+ P+ T+ ++N G ++ + F+ M EP+
Sbjct: 580 IKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVD-SGFEPDAHICD 638
Query: 438 CVVDLLGRAG----LVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLD 493
V+ G L E +K ++ V + C N++L +R+ + D
Sbjct: 639 SVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRVTDD 698
Query: 494 MEPRN 498
E R+
Sbjct: 699 KEERD 703
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 129/286 (45%), Gaps = 24/286 (8%)
Query: 210 LKCGE-VEAANEVFVN--MPDKNVGSWNAMISGLARCGMIENARTLFDEMGER----DEI 262
L+CG+ V E+ N MPD V S+N +I G +E A L +EM +
Sbjct: 156 LECGKAVSLLREMRRNSLMPD--VFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLV 213
Query: 263 SWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFV 322
+W +ID + K EA+ +M+ ++ + S++ + G LD+G+ + V
Sbjct: 214 TWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV 273
Query: 323 ERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR----EVSTWNAMIGGLAIHGRA 378
A+ LI + K G+L A E+FE M R V T+ +I GL G+
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKT 333
Query: 379 EDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGC 438
++A++L M + +PN VT+ ++N G+V + + MK+ P+ +
Sbjct: 334 KEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK-RRTRPDNITYNI 392
Query: 439 VVDLLGRAGLVEEAEKFI-----ESMPVKPNVAVWGALLNACRIHG 479
++ L G ++EA K + +S P+V + AL IHG
Sbjct: 393 LLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNAL-----IHG 433
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 122/523 (23%), Positives = 223/523 (42%), Gaps = 57/523 (10%)
Query: 40 CFHSLQHLKQAHAII---LKTAHFHDHFVSGTLLK--CYANPNFNNFTLATKVFDCIPRP 94
CF L A A++ +K + D +LL C+ L ++F +P
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 183
Query: 95 NVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFH 154
N N + G + + +A++ +M+ +P+ FTY T+ V G K
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTV-----VNGLCKR----- 233
Query: 155 AFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGE 214
GD+ + + + +KM E GK + DV+ + +ID
Sbjct: 234 ---------GDIDLALSLL------------KKM--EKGKIEADVVIYTTIIDALCNYKN 270
Query: 215 VEAANEVFVNMPDK----NVGSWNAMISGLARCGMIENARTLFDEMGER----DEISWSA 266
V A +F M +K NV ++N++I L G +A L +M ER + +++SA
Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330
Query: 267 IIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNS 326
+ID ++K+ EA +++ +M + I P S++ LD+ + + +
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 327 IQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR----EVSTWNAMIGGLAIHGRAEDAM 382
+ V LI + K R++ E+F +M R T+N +I GL G + A
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450
Query: 383 KLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDL 442
K+F KM + P+ +T+ +L+ G +E+ L +F +++ ++EP++ + +++
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS-KMEPDIYTYNIMIEG 509
Query: 443 LGRAGLVEEAEKFIESMP---VKPNVAVWGALLNA-CRIHGNVELGERVGWILLDMEPRN 498
+ +AG VE+ S+ VKPNV ++ +++ CR E + D N
Sbjct: 510 MCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPN 569
Query: 499 SGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDM 541
SG Y L I A+ D A + + R V +S + M
Sbjct: 570 SGTYNTL--IRARLRDGDKAASAELIKEMRSCGFVGDASTISM 610
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 107/448 (23%), Positives = 199/448 (44%), Gaps = 27/448 (6%)
Query: 92 PRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGV 151
P P++ N L + + IS +M L + ++Y L + +
Sbjct: 76 PLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLAL 135
Query: 152 QFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDE--SGKTQTDVICWNAMIDGY 209
++K G D+ S+ + Y EA ++D+ + Q + + +N +I G
Sbjct: 136 AVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGL 195
Query: 210 L---KCGEVEAANEVFVN---MPDKNVGSWNAMISGLARCGMIENARTLFDEMG----ER 259
K E A + V PD + ++ +++GL + G I+ A +L +M E
Sbjct: 196 FLHNKASEAVALIDRMVARGCQPD--LFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 253
Query: 260 DEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGS-LDQGRWI 318
D + ++ IID + +AL +F +M + I+P+ S++ N G D R +
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 313
Query: 319 HSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVS----TWNAMIGGLAI 374
+ER I + V +ALID +VK G+L A +++++M R + T++++I G +
Sbjct: 314 SDMIERK-INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 372
Query: 375 HGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEME 434
H R ++A +F M + PN VT+ ++ A VE G+ LF M + + +
Sbjct: 373 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 432
Query: 435 HFGCVVDLLGRAGLVEEAEKFIESMP---VKPNVAVWGALLNACRIHGNVELGERVGWIL 491
+ ++ L +AG + A+K + M V P++ + LL+ +G +E V L
Sbjct: 433 -YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491
Query: 492 L--DMEPRNSGRYALLSNIYAKAGRWDD 517
MEP + Y ++ KAG+ +D
Sbjct: 492 QKSKMEP-DIYTYNIMIEGMCKAGKVED 518
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 180/404 (44%), Gaps = 21/404 (5%)
Query: 94 PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQF 153
P+V+ CN L +++GE S +M+ P+ T+ L GS ++
Sbjct: 196 PSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYL 255
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLD--ESGKTQTDVICWNAMIDGYLK 211
+ K G + + + Y G F+ A ++LD +S DV +N +I +
Sbjct: 256 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 315
Query: 212 CGEVEAANEVFVNMPDK----NVGSWNAMISGLARCGMIENARTLFDEMGE----RDEIS 263
+ + +M + N ++N +I+G + G + A L +EM + ++
Sbjct: 316 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 375
Query: 264 WSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVE 323
++A+IDG+I + FKEAL++F+ M+ + + PS +L D R + ++
Sbjct: 376 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 435
Query: 324 RNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR----EVSTWNAMIGGLAIHGRAE 379
RN + V + T +ID K G LD A + +M ++ T++A+I G GR +
Sbjct: 436 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFK 495
Query: 380 DAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCV 439
A ++ ++ PNG+ + ++ C G ++ + ++ +M F +
Sbjct: 496 TAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFT-FNVL 554
Query: 440 VDLLGRAGLVEEAEKFIESMP---VKPNVAVWGALLNACRIHGN 480
V L +AG V EAE+F+ M + PN + L+N +GN
Sbjct: 555 VTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLING---YGN 595
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 113/512 (22%), Positives = 201/512 (39%), Gaps = 104/512 (20%)
Query: 94 PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQF 153
PN N + G G+ A ++M+ PN T+ L
Sbjct: 336 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALI--------------- 380
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFGLFREARK---MLDESGKTQTDVICWNAMIDGYL 210
D HI S G F+EA K M++ G T ++V + ++DG
Sbjct: 381 -----------DGHI---------SEGNFKEALKMFYMMEAKGLTPSEV-SYGVLLDGLC 419
Query: 211 KCGEVEAANEVFVNMPDKNVG----SWNAMISGLARCGMIENARTLFDEMG----ERDEI 262
K E + A ++ M V ++ MI GL + G ++ A L +EM + D +
Sbjct: 420 KNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIV 479
Query: 263 SWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFV 322
++SA+I+G+ K FK A E+ ++ R + P+ + +++ C +G L +
Sbjct: 480 TYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKE-------- 531
Query: 323 ERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKM----KVREVSTWNAMIGGLAIHGRA 378
A ++E M R+ T+N ++ L G+
Sbjct: 532 ---------------------------AIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 564
Query: 379 EDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGC 438
+A + M + PN V+F ++N ++G + +F+ M +V P +G
Sbjct: 565 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH-HPTFFTYGS 623
Query: 439 VVDLLGRAGLVEEAEKFIESM---PVKPNVAVWGALLNACRIHGNVE-----LGERVGWI 490
++ L + G + EAEKF++S+ P + ++ LL A GN+ GE V
Sbjct: 624 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 683
Query: 491 LLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSM----MDMGGKVH 546
+L P + +L+S + + G+ K + RG +P M +D K
Sbjct: 684 IL---PDSYTYTSLISGL-CRKGKTVIAILFAKEAEARG-NVLPNKVMYTCFVDGMFKAG 738
Query: 547 EFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYS 578
++K G QM + + + I+GYS
Sbjct: 739 QWKAGIYFREQMDNLGHTPDIVTTNAMIDGYS 770
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/446 (20%), Positives = 187/446 (41%), Gaps = 56/446 (12%)
Query: 56 KTAHFHDHFVSGTLLKCYANP-NFNNFTLATKVFDCIPRP-NVFVCNIYLKGSIENGEPH 113
K H F G+LLK + K +P + + N L ++G
Sbjct: 611 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 670
Query: 114 KAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGI 173
KA+S + +M+ + P+ +TY +L ++G ++G A + + ++ +
Sbjct: 671 KAVSLFGEMVQRSILPDSYTYTSL-----ISGLCRKGKTVIAILFAKEAEARGNVLPNKV 725
Query: 174 QMYASF--GLFREA--------RKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFV 223
MY F G+F+ R+ +D G T D++ NAMIDGY + G++E N++
Sbjct: 726 -MYTCFVDGMFKAGQWKAGIYFREQMDNLGHTP-DIVTTNAMIDGYSRMGKIEKTNDLLP 783
Query: 224 NMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEV 283
M ++N G + +++ ++ GY K++ + +
Sbjct: 784 EMGNQN---------------------------GGPNLTTYNILLHGYSKRKDVSTSFLL 816
Query: 284 FHQMQREKIKPSRHLLPSMLTVCANVGSLDQG-RWIHSFVERNSIQVDAVLGTALIDMYV 342
+ + I P + S++ L+ G + + +F+ R ++VD LI
Sbjct: 817 YRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICR-GVEVDRYTFNMLISKCC 875
Query: 343 KCGRLDMAWEVFEKMKVREVS----TWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGV 398
G ++ A+++ + M +S T +AM+ L + R +++ + +M+ + P
Sbjct: 876 ANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESR 935
Query: 399 TFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAE---KF 455
++G++N G ++ + M ++I P +V L + G +EA +F
Sbjct: 936 KYIGLINGLCRVGDIKTAFVVKEEMI-AHKICPPNVAESAMVRALAKCGKADEATLLLRF 994
Query: 456 IESMPVKPNVAVWGALLNACRIHGNV 481
+ M + P +A + L++ C +GNV
Sbjct: 995 MLKMKLVPTIASFTTLMHLCCKNGNV 1020
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 168/380 (44%), Gaps = 31/380 (8%)
Query: 110 GEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIK 169
G+ KA S +M+ P+ TY + ++ + + GL DV+
Sbjct: 462 GKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTY 521
Query: 170 SAGIQMYASFGLFREARKMLDESGKT--QTDVICWNAMIDGYLKCGEVEAANEVFVNMPD 227
+ + + GL +ARK +E + +V+ + A+I YLK +V ANE+F M
Sbjct: 522 TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLS 581
Query: 228 K----NVGSWNAMISGLARCGMIENARTLFDEM-GERDE-------------------IS 263
+ N+ +++A+I G + G +E A +F+ M G +D ++
Sbjct: 582 EGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVT 641
Query: 264 WSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVE 323
+ A++DG+ K +EA ++ M E +P++ + +++ VG LD+ + + + +
Sbjct: 642 YGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMS 701
Query: 324 RNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMK----VREVSTWNAMIGGLAIHGRAE 379
+ ++LID Y K R D+A +V KM V + MI GL G+ +
Sbjct: 702 EHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 761
Query: 380 DAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCV 439
+A KL M + +PN VT+ +++ G +E L L M + P + +
Sbjct: 762 EAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGS-KGVAPNYVTYRVL 820
Query: 440 VDLLGRAGLVEEAEKFIESM 459
+D + G ++ A +E M
Sbjct: 821 IDHCCKNGALDVAHNLLEEM 840
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 189/448 (42%), Gaps = 74/448 (16%)
Query: 19 SDQAPSSKLSQKTVLDILN----KKCFHSLQHLKQAHAII---LKTAHFHDHFVSGTLLK 71
+++A S L+ VL+ +N +C S ++A ++I + D +L
Sbjct: 432 AEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLN 491
Query: 72 CYANPNFNNFTLATKVFDCIPR----PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNS 127
N + LA +F+ + R +V+ I + + G +A +++M +
Sbjct: 492 YLCNAS--KMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGC 549
Query: 128 RPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARK 187
PN TY L HA++ + ++ YA+ LF
Sbjct: 550 TPNVVTYTAL---------------IHAYLKAKKVS------------YAN-ELF---ET 578
Query: 188 MLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM------PD-------------- 227
ML E +++ ++A+IDG+ K G+VE A ++F M PD
Sbjct: 579 MLSEG--CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSER 636
Query: 228 KNVGSWNAMISGLARCGMIENARTLFDEMG----ERDEISWSAIIDGYIKQRCFKEALEV 283
NV ++ A++ G + +E AR L D M E ++I + A+IDG K EA EV
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 284 FHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVK 343
+M + + S++ V D + S + NS + V+ T +ID K
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756
Query: 344 CGRLDMAWEVFEKMKVR----EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVT 399
G+ D A+++ + M+ + V T+ AMI G + G+ E ++L +M + PN VT
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Query: 400 FVGVLNACAHAGMVERGLGLFNSMKRVY 427
+ +++ C G ++ L MK+ +
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTH 844
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 105/499 (21%), Positives = 203/499 (40%), Gaps = 48/499 (9%)
Query: 94 PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQF 153
P+ + G E +A+ ++M + PN TY TL C + +
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRV 359
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKT--QTDVICWNAMIDGY-- 209
++ +G I ++ + Y + G A K+L + K + +N +I
Sbjct: 360 LNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICG 419
Query: 210 ----LKCGEVEAANEVFVNMPDKNVGSWNAMISGLARC----GMIENARTLFDEMGER-- 259
L C ++ A + + M V +S RC G E A ++ EM +
Sbjct: 420 DKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGF 479
Query: 260 --DEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGR- 316
D ++S +++ + A +F +M+R + + M+ G ++Q R
Sbjct: 480 IPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK 539
Query: 317 WIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMK----VREVSTWNAMIGGL 372
W + E + V TALI Y+K ++ A E+FE M + + T++A+I G
Sbjct: 540 WFNEMREVGCTP-NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598
Query: 373 AIHGRAEDAMKLFTKMNGEK----------------RKPNGVTFVGVLNACAHAGMVERG 416
G+ E A ++F +M G K +PN VT+ +L+ + VE
Sbjct: 599 CKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEA 658
Query: 417 LGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMP---VKPNVAVWGALLN 473
L ++M + EP + ++D L + G ++EA++ M + + +L++
Sbjct: 659 RKLLDAMS-MEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLID 717
Query: 474 ACRIHGNVELGERVGWILLDME-PRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIE- 531
+L +V +L+ N Y + + K G+ D+ ++ ++M+E+G +
Sbjct: 718 RYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQP 777
Query: 532 -TVPGSSMMD---MGGKVH 546
V ++M+D M GK+
Sbjct: 778 NVVTYTAMIDGFGMIGKIE 796
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 163/340 (47%), Gaps = 14/340 (4%)
Query: 100 NIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVK 159
+I + G ++G A + +++M + + + Y TL + G +G + ++K
Sbjct: 251 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK 310
Query: 160 QGLTGDVHIKSAGIQMYASFGLFREARKMLDESGK--TQTDVICWNAMIDGYLKCGEVEA 217
+ +T DV SA I + G REA ++ E + D + + ++IDG+ K +++
Sbjct: 311 RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDK 370
Query: 218 ANEVFVNMPDK----NVGSWNAMISGLARCGMIENARTLFDEMGER----DEISWSAIID 269
AN + M K N+ ++N +I+G + +I++ LF +M R D ++++ +I
Sbjct: 371 ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQ 430
Query: 270 GYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQV 329
G+ + + A E+F +M +++P +L + G ++ I +E++ +++
Sbjct: 431 GFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMEL 490
Query: 330 DAVLGTALIDMYVKCGRLDMAWEVFEKMKVR----EVSTWNAMIGGLAIHGRAEDAMKLF 385
D + +I ++D AW++F + ++ +V T+N MIGGL G +A LF
Sbjct: 491 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLF 550
Query: 386 TKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKR 425
KM + PNG T+ ++ A G + L +KR
Sbjct: 551 RKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKR 590
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/441 (21%), Positives = 183/441 (41%), Gaps = 51/441 (11%)
Query: 49 QAHAIILKTAHFHDHFVSGTLLK--CYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGS 106
A I+K + D TL+ C L ++ + +P + N + G
Sbjct: 128 SAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGL 187
Query: 107 IENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDV 166
NG+ A+ +M+ +PN+ TY + K +G ++
Sbjct: 188 CLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL------------- 234
Query: 167 HIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMP 226
RKM E K + D + ++ +IDG K G ++ A +F M
Sbjct: 235 ------------------LRKM--EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 274
Query: 227 DK----NVGSWNAMISGLARCGMIENARTLFDEMGER----DEISWSAIIDGYIKQRCFK 278
K ++ + +I G G ++ L +M +R D +++SA+ID ++K+ +
Sbjct: 275 IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLR 334
Query: 279 EALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALI 338
EA E+ +M + I P S++ LD+ + + + LI
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILI 394
Query: 339 DMYVKCGRLDMAWEVFEKMKVR----EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRK 394
+ Y K +D E+F KM +R + T+N +I G G+ E A +LF +M + +
Sbjct: 395 NGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVR 454
Query: 395 PNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEK 454
P+ V++ +L+ G E+ L +F +++ ++E ++ + ++ + A V++A
Sbjct: 455 PDIVSYKILLDGLCDNGEPEKALEIFEKIEK-SKMELDIGIYNIIIHGMCNASKVDDAWD 513
Query: 455 FIESMP---VKPNVAVWGALL 472
S+P VKP+V + ++
Sbjct: 514 LFCSLPLKGVKPDVKTYNIMI 534
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 157/371 (42%), Gaps = 20/371 (5%)
Query: 130 NKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKML 189
N +T + C + ++K G D S I G EA +++
Sbjct: 106 NLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELV 165
Query: 190 D---ESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDK----NVGSWNAMISGLAR 242
D E G T +I NA+++G G+V A + M + N ++ ++ + +
Sbjct: 166 DRMVEMGHKPT-LITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCK 224
Query: 243 CGMIENARTLFDEMGER----DEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHL 298
G A L +M ER D + +S IIDG K A +F++M+ + K +
Sbjct: 225 SGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIII 284
Query: 299 LPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMK 358
+++ G D G + + + I D V +ALID +VK G+L A E+ ++M
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMI 344
Query: 359 VREVS----TWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVE 414
R +S T+ ++I G + + A + M + PN TF ++N A +++
Sbjct: 345 QRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLID 404
Query: 415 RGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESM---PVKPNVAVWGAL 471
GL LF M + + + + ++ G +E A++ + M V+P++ + L
Sbjct: 405 DGLELFRKMS-LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKIL 463
Query: 472 LNACRIHGNVE 482
L+ +G E
Sbjct: 464 LDGLCDNGEPE 474
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 197/433 (45%), Gaps = 20/433 (4%)
Query: 61 HDHFVSGTLLKCYANPNFNNFTLAT--KVFDCIPRPNVFVCNIYLKGSIENGEPHKAISC 118
H+ + L+ C+ + + LA K+ P++ + L G A++
Sbjct: 43 HNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 102
Query: 119 YHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYAS 178
+M+ + RP+ T+ TL + E V +V++G ++ +
Sbjct: 103 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 162
Query: 179 FGLFREARKMLD--ESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDK----NVGS 232
G A +L+ E+ K + DV+ +N +ID K V+ A +F M K NV +
Sbjct: 163 RGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 222
Query: 233 WNAMISGLARCGMIENARTLFDEMGER----DEISWSAIIDGYIKQRCFKEALEVFHQMQ 288
++++IS L G +A L +M E+ + ++++A+ID ++K+ F EA ++ M
Sbjct: 223 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI 282
Query: 289 REKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLD 348
+ I P S++ LD+ + + F+ D LI + K R++
Sbjct: 283 KRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVE 342
Query: 349 MAWEVFEKMKVR----EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVL 404
E+F +M R + T+ +I GL G ++A K+F +M + P+ +T+ +L
Sbjct: 343 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 402
Query: 405 NACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMP---V 461
+ + G +E+ L +F+ M++ EI+ ++ + +++ + +AG V++ S+ V
Sbjct: 403 DGLCNNGKLEKALEVFDYMQK-SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 461
Query: 462 KPNVAVWGALLNA 474
KPNV + +++
Sbjct: 462 KPNVVTYNTMISG 474
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 155/340 (45%), Gaps = 14/340 (4%)
Query: 81 FTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKA 140
F L K+ +V + N + + A++ + +M RPN TY +L
Sbjct: 170 FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 229
Query: 141 CAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGK--TQTD 198
G + Q + ++++ + ++ +A I + G F EA K+ D+ K D
Sbjct: 230 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 289
Query: 199 VICWNAMIDGYLKCGEVEAANEVFVNMPDKN----VGSWNAMISGLARCGMIENARTLFD 254
+ +N++I+G+ ++ A ++F M K+ + ++N +I G + +E+ LF
Sbjct: 290 IFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFR 349
Query: 255 EMGER----DEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVG 310
EM R D ++++ +I G A +VF QM + + P +L N G
Sbjct: 350 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 409
Query: 311 SLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR----EVSTWN 366
L++ + +++++ I++D + T +I+ K G++D W++F + ++ V T+N
Sbjct: 410 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 469
Query: 367 AMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNA 406
MI GL ++A L KM + P+ T+ ++ A
Sbjct: 470 TMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 509
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/346 (19%), Positives = 159/346 (45%), Gaps = 14/346 (4%)
Query: 93 RPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQ 152
+PN+ + + G + G+ A + +KM + + T+ + V + +
Sbjct: 147 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 206
Query: 153 FHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDE--SGKTQTDVICWNAMIDGYL 210
+ +G+ +V S+ I S+G + +A ++L + K +++ +NA+ID ++
Sbjct: 207 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 266
Query: 211 KCGEVEAANEVFVNM----PDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEI---- 262
K G+ A ++ +M D ++ ++N++I+G ++ A+ +F+ M +D
Sbjct: 267 KEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLD 326
Query: 263 SWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFV 322
+++ +I G+ K + ++ E+F +M + +++ + G D + + +
Sbjct: 327 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 386
Query: 323 ERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVS----TWNAMIGGLAIHGRA 378
+ + D + + L+D G+L+ A EVF+ M+ E+ + MI G+ G+
Sbjct: 387 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 446
Query: 379 EDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMK 424
+D LF ++ + KPN VT+ +++ +++ L MK
Sbjct: 447 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 492
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 141/320 (44%), Gaps = 52/320 (16%)
Query: 226 PDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEIS-----WSAIIDGYIKQRCFKEA 280
P ++ +N ++S +A+ + +L ++M +R IS ++ +I+ + ++ A
Sbjct: 6 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKM-QRLGISHNLYTYNILINCFCRRSQISLA 64
Query: 281 LEVFHQMQREKIKPSRHLLPSMLT-VCANVGSLDQGRWIHSFVERNSIQVDAVLGTALID 339
L + +M + +PS L S+L C G+ I DAV AL+D
Sbjct: 65 LALLGKMMKLGYEPSIVTLSSLLNGYC-------HGKRIS----------DAV---ALVD 104
Query: 340 MYVKCG-RLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGV 398
V+ G R D T+ +I GL +H +A +A+ L +M +PN V
Sbjct: 105 QMVEMGYRPDTI-------------TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV 151
Query: 399 TFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIES 458
T+ V+N G ++ L N M+ +IE ++ F ++D L + V++A +
Sbjct: 152 TYGVVVNGLCKRGDIDLAFNLLNKMEAA-KIEADVVIFNTIIDSLCKYRHVDDALNLFKE 210
Query: 459 MP---VKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPR----NSGRYALLSNIYAK 511
M ++PNV + +L++ +G +L DM + N + L + + K
Sbjct: 211 METKGIRPNVVTYSSLISCLCSYGR---WSDASQLLSDMIEKKINPNLVTFNALIDAFVK 267
Query: 512 AGRWDDVARVRKLMKERGIE 531
G++ + ++ M +R I+
Sbjct: 268 EGKFVEAEKLHDDMIKRSID 287
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 118/488 (24%), Positives = 211/488 (43%), Gaps = 26/488 (5%)
Query: 84 ATKVFDCIPR---PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKA 140
A +D + R P +F + +K E A+S M PN Y TL +
Sbjct: 202 ANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHS 261
Query: 141 CAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDES--GKTQTD 198
+ V E +Q + G D + I F EA KM++ D
Sbjct: 262 LSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPD 321
Query: 199 VICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGE 258
I + +++G K G V+AA ++F +P + +N +I G G +++A+ + +M
Sbjct: 322 DITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVT 381
Query: 259 R-----DEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLD 313
D +++++I GY K+ ALEV H M+ + KP+ + ++ +G +D
Sbjct: 382 SYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKID 441
Query: 314 QGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR----EVSTWNAMI 369
+ + + + + ++ + V LI + K R+ A E+F +M + +V T+N++I
Sbjct: 442 EAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI 501
Query: 370 GGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEI 429
GL + A+ L M E N VT+ ++NA G ++ L N M V++
Sbjct: 502 SGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM--VFQG 559
Query: 430 EPEME-HFGCVVDLLGRAGLVEEAEKFIESMPVK---PNVAVWGALLNA-CRIHGNVELG 484
P E + ++ L RAG V++A E M P+ L+N CR E
Sbjct: 560 SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAV 619
Query: 485 ERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGI--ETVPGSSMMD-- 540
E ++L + + L N +AGR +D + + ++ GI +TV +++M
Sbjct: 620 EFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWL 679
Query: 541 -MGGKVHE 547
GG V++
Sbjct: 680 CKGGFVYD 687
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 122/283 (43%), Gaps = 24/283 (8%)
Query: 263 SWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFV 322
S++ +++ + C K A VF+ M KI P+ ++ V +D + +
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM 243
Query: 323 ERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMK----VREVSTWNAMIGGLAIHGRA 378
++ ++V+ LI KC R++ A ++ E+M V + T+N +I GL R
Sbjct: 244 TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRI 303
Query: 379 EDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGC 438
+A K+ +M P+ +T+ ++N G V+ LF + + PE+ F
Sbjct: 304 NEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK-----PEIVIFNT 358
Query: 439 VVDLLGRAGLVEEAEKFIESMP----VKPNVAVWGALLNACRIHGNVELGERVGWILLDM 494
++ G +++A+ + M + P+V + +L+ G V L V L DM
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEV---LHDM 415
Query: 495 EPRNSG------RYALLSNIYAKAGRWDDVARVRKLMKERGIE 531
RN G Y +L + + K G+ D+ V M G++
Sbjct: 416 --RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLK 456
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 190/443 (42%), Gaps = 29/443 (6%)
Query: 54 ILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPR-----PNVFVCNIYLKGSIE 108
ILK D + +LL + N A KVFD + + PN +I + G E
Sbjct: 221 ILKIGFVLDSHIGTSLLLGFCRGL--NLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCE 278
Query: 109 NGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHI 168
G +A +M +P+ TY L KA G + + ++ +G +VH
Sbjct: 279 VGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHT 338
Query: 169 KSAGIQMYASFGLFREA----RKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVN 224
+ I G EA RKM+ + + VI +NA+I+GY K G V A E+
Sbjct: 339 YTVLIDGLCRDGKIEEANGVCRKMVKD--RIFPSVITYNALINGYCKDGRVVPAFELLTV 396
Query: 225 MPDK----NVGSWNAMISGLARCGMIENARTLFDEMGER----DEISWSAIIDGYIKQRC 276
M + NV ++N ++ GL R G A L M + D +S++ +IDG ++
Sbjct: 397 MEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGH 456
Query: 277 FKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTA 336
A ++ M I+P +++ G D + R I +D V GT
Sbjct: 457 MNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTT 516
Query: 337 LIDMYVKCGRLDMAWEVFEKM-KVREVST---WNAMIGGLAIHGRAEDAMKLFTKMNGEK 392
LID K G+ A + E + K+R ++T N ++ L+ + ++ + + K+N
Sbjct: 517 LIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLG 576
Query: 393 RKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEA 452
P+ VT+ +++ +G + + MK + P + + +++ L + G VEEA
Sbjct: 577 LVPSVVTYTTLVDGLIRSGDITGSFRILELMK-LSGCLPNVYPYTIIINGLCQFGRVEEA 635
Query: 453 EKFIESMP---VKPNVAVWGALL 472
EK + +M V PN + ++
Sbjct: 636 EKLLSAMQDSGVSPNHVTYTVMV 658
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 140/334 (41%), Gaps = 37/334 (11%)
Query: 134 YPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESG 193
Y T+ A G + F + ++K G D HI ++ + + R+A K+ D
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMS 257
Query: 194 KTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLF 253
K +V C A N V S++ +I GL G +E A L
Sbjct: 258 K---EVTC---------------APNSV----------SYSILIHGLCEVGRLEEAFGLK 289
Query: 254 DEMGER----DEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANV 309
D+MGE+ +++ +I + +A +F +M KP+ H ++
Sbjct: 290 DQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRD 349
Query: 310 GSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR----EVSTW 365
G +++ + + ++ I + ALI+ Y K GR+ A+E+ M+ R V T+
Sbjct: 350 GKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTF 409
Query: 366 NAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKR 425
N ++ GL G+ A+ L +M P+ V++ +++ G + L +SM
Sbjct: 410 NELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMN- 468
Query: 426 VYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESM 459
++IEP+ F +++ + G + A F+ M
Sbjct: 469 CFDIEPDCLTFTAIINAFCKQGKADVASAFLGLM 502
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 107/453 (23%), Positives = 202/453 (44%), Gaps = 34/453 (7%)
Query: 151 VQFHAFVVK--QGLTGDVHIKSAGIQMYASFGLFREARKMLDE---SGKTQTDVICWNAM 205
VQF +V + D + Q+ FGL REAR++ ++ G + C +
Sbjct: 158 VQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYL 217
Query: 206 IDGYLKCGEVEAANEVFVNMPDK----NVGSWNAMISGLARCGMIENARTLFDEMGER-- 259
C + A VF P+ NV S+N +I + + G I+ A L M +
Sbjct: 218 TRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGY 277
Query: 260 --DEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRW 317
D IS+S +++GY + + ++ M+R+ +KP+ ++ S++ + + L +
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 318 IHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVS----TWNAMIGGLA 373
S + R I D V+ T LID + K G + A + F +M R+++ T+ A+I G
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 374 IHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEM 433
G +A KLF +M + +P+ VTF ++N AG ++ + N M + P +
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNV 456
Query: 434 EHFGCVVDLLGRAGLVEEAEKFIESM---PVKPNVAVWGALLNACRIHGNVELGER-VGW 489
+ ++D L + G ++ A + + M ++PN+ + +++N GN+E + VG
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 490 ILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFK 549
++ Y L + Y K+G D + K M +G++ + + M G
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 550 MGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTS 582
+ D EK+++ + +G +PN +
Sbjct: 577 LEDG------------EKLLNWMLAKGIAPNAT 597
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 145/323 (44%), Gaps = 18/323 (5%)
Query: 94 PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQF 153
P+V + + G GE K M +PN + Y ++ + E +
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDE--SGKTQTDVICWNAMIDGYLK 211
+ +++QG+ D + + I + G R A K E S DV+ + A+I G+ +
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 212 CGEVEAANEVFVNM------PDKNVGSWNAMISGLARCGMIENARTLFDEMGER----DE 261
G++ A ++F M PD ++ +I+G + G +++A + + M + +
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSV--TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 262 ISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSF 321
++++ +IDG K+ A E+ H+M + ++P+ S++ G++++ +
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 322 VERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR----EVSTWNAMIGGLAIHGR 377
E + D V T L+D Y K G +D A E+ ++M + + T+N ++ G +HG
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 378 AEDAMKLFTKMNGEKRKPNGVTF 400
ED KL M + PN TF
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTF 599
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 114/506 (22%), Positives = 203/506 (40%), Gaps = 67/506 (13%)
Query: 99 CNIYL-KGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFV 157
CN+YL + S + + AI + + + N +Y + G +KE +
Sbjct: 213 CNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLM 272
Query: 158 VKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKT--QTDVICWNAMIDGYLKCGEV 215
+G T DV S + Y FG + K+++ + + + + ++I + ++
Sbjct: 273 ELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKL 332
Query: 216 EAANEVFVNM------PDKNVGSWNAMISGLARCGMIENARTLFDEMGER----DEISWS 265
A E F M PD V + +I G + G I A F EM R D ++++
Sbjct: 333 AEAEEAFSEMIRQGILPDTVV--YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390
Query: 266 AIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERN 325
AII G+ + EA ++FH+M + ++P ++ G + +H+ + +
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 450
Query: 326 SIQVDAVLGTALIDMYVKCGRLDMAWEVFEKM-KV---REVSTWNAMIGGLAIHGRAEDA 381
+ V T LID K G LD A E+ +M K+ + T+N+++ GL G E+A
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
Query: 382 MKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVD 441
+KL + + VT+ +++A +G M + EI EM
Sbjct: 511 VKLVGEFEAAGLNADTVTYTTLMDAYCKSG----------EMDKAQEILKEM-------- 552
Query: 442 LLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGER-VGWILLDMEPRNSG 500
LG+ ++P + + L+N +HG +E GE+ + W+L N+
Sbjct: 553 -LGKG--------------LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 501 RYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHE-FKMGDSSHPQMK 559
+ L Y + K M RG+ GK +E G MK
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGP---------DGKTYENLVKGHCKARNMK 648
Query: 560 EIYLMLEKMMDKLQIEGYSPNTSMVS 585
E + + ++M K G+S + S S
Sbjct: 649 EAWFLFQEMKGK----GFSVSVSTYS 670
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/344 (19%), Positives = 140/344 (40%), Gaps = 45/344 (13%)
Query: 94 PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQF 153
P+V + G + G+ +A +H+M P+ T+ L G +K+ +
Sbjct: 384 PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 443
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCG 213
H +++ G + +V+ + +IDG K G
Sbjct: 444 HNHMIQAGCS---------------------------------PNVVTYTTLIDGLCKEG 470
Query: 214 EVEAANEVFVNM----PDKNVGSWNAMISGLARCGMIENARTL---FDEMG-ERDEISWS 265
++++ANE+ M N+ ++N++++GL + G IE A L F+ G D ++++
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 530
Query: 266 AIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERN 325
++D Y K +A E+ +M + ++P+ ++ G L+ G + +++
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 590
Query: 326 SIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREV----STWNAMIGGLAIHGRAEDA 381
I +A +L+ Y L A +++ M R V T+ ++ G ++A
Sbjct: 591 GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 650
Query: 382 MKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKR 425
LF +M G+ + T+ ++ +F+ M+R
Sbjct: 651 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRR 694
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 111/251 (44%), Gaps = 45/251 (17%)
Query: 94 PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQF 153
PNV + G + G+ A H+M + +PN FTY ++ +G+++E V+
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDES-GK-TQTDVICWNAMIDGY-- 209
GL D + + Y G +A+++L E GK Q ++ +N +++G+
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 210 ---LKCGE------------------------------VEAANEVFVNMPDKNVG----S 232
L+ GE ++AA ++ +M + VG +
Sbjct: 574 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Query: 233 WNAMISGLARCGMIENARTLFDEM-GERDEIS---WSAIIDGYIKQRCFKEALEVFHQMQ 288
+ ++ G + ++ A LF EM G+ +S +S +I G++K++ F EA EVF QM+
Sbjct: 634 YENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693
Query: 289 REKIKPSRHLL 299
RE + + +
Sbjct: 694 REGLAADKEIF 704
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 107/453 (23%), Positives = 202/453 (44%), Gaps = 34/453 (7%)
Query: 151 VQFHAFVVK--QGLTGDVHIKSAGIQMYASFGLFREARKMLDE---SGKTQTDVICWNAM 205
VQF +V + D + Q+ FGL REAR++ ++ G + C +
Sbjct: 158 VQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYL 217
Query: 206 IDGYLKCGEVEAANEVFVNMPDK----NVGSWNAMISGLARCGMIENARTLFDEMGER-- 259
C + A VF P+ NV S+N +I + + G I+ A L M +
Sbjct: 218 TRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGY 277
Query: 260 --DEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRW 317
D IS+S +++GY + + ++ M+R+ +KP+ ++ S++ + + L +
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 318 IHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVS----TWNAMIGGLA 373
S + R I D V+ T LID + K G + A + F +M R+++ T+ A+I G
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 374 IHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEM 433
G +A KLF +M + +P+ VTF ++N AG ++ + N M + P +
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNV 456
Query: 434 EHFGCVVDLLGRAGLVEEAEKFIESM---PVKPNVAVWGALLNACRIHGNVELGER-VGW 489
+ ++D L + G ++ A + + M ++PN+ + +++N GN+E + VG
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 490 ILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFK 549
++ Y L + Y K+G D + K M +G++ + + M G
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 550 MGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTS 582
+ D EK+++ + +G +PN +
Sbjct: 577 LEDG------------EKLLNWMLAKGIAPNAT 597
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 145/323 (44%), Gaps = 18/323 (5%)
Query: 94 PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQF 153
P+V + + G GE K M +PN + Y ++ + E +
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDE--SGKTQTDVICWNAMIDGYLK 211
+ +++QG+ D + + I + G R A K E S DV+ + A+I G+ +
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 212 CGEVEAANEVFVNM------PDKNVGSWNAMISGLARCGMIENARTLFDEMGER----DE 261
G++ A ++F M PD ++ +I+G + G +++A + + M + +
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSV--TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 262 ISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSF 321
++++ +IDG K+ A E+ H+M + ++P+ S++ G++++ +
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 322 VERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR----EVSTWNAMIGGLAIHGR 377
E + D V T L+D Y K G +D A E+ ++M + + T+N ++ G +HG
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 378 AEDAMKLFTKMNGEKRKPNGVTF 400
ED KL M + PN TF
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTF 599
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 114/506 (22%), Positives = 203/506 (40%), Gaps = 67/506 (13%)
Query: 99 CNIYL-KGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFV 157
CN+YL + S + + AI + + + N +Y + G +KE +
Sbjct: 213 CNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLM 272
Query: 158 VKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKT--QTDVICWNAMIDGYLKCGEV 215
+G T DV S + Y FG + K+++ + + + + ++I + ++
Sbjct: 273 ELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKL 332
Query: 216 EAANEVFVNM------PDKNVGSWNAMISGLARCGMIENARTLFDEMGER----DEISWS 265
A E F M PD V + +I G + G I A F EM R D ++++
Sbjct: 333 AEAEEAFSEMIRQGILPDTVV--YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390
Query: 266 AIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERN 325
AII G+ + EA ++FH+M + ++P ++ G + +H+ + +
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 450
Query: 326 SIQVDAVLGTALIDMYVKCGRLDMAWEVFEKM-KV---REVSTWNAMIGGLAIHGRAEDA 381
+ V T LID K G LD A E+ +M K+ + T+N+++ GL G E+A
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
Query: 382 MKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVD 441
+KL + + VT+ +++A +G M + EI EM
Sbjct: 511 VKLVGEFEAAGLNADTVTYTTLMDAYCKSG----------EMDKAQEILKEM-------- 552
Query: 442 LLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGER-VGWILLDMEPRNSG 500
LG+ ++P + + L+N +HG +E GE+ + W+L N+
Sbjct: 553 -LGKG--------------LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 501 RYALLSNIYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHE-FKMGDSSHPQMK 559
+ L Y + K M RG+ GK +E G MK
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGP---------DGKTYENLVKGHCKARNMK 648
Query: 560 EIYLMLEKMMDKLQIEGYSPNTSMVS 585
E + + ++M K G+S + S S
Sbjct: 649 EAWFLFQEMKGK----GFSVSVSTYS 670
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/344 (19%), Positives = 140/344 (40%), Gaps = 45/344 (13%)
Query: 94 PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQF 153
P+V + G + G+ +A +H+M P+ T+ L G +K+ +
Sbjct: 384 PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 443
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCG 213
H +++ G + +V+ + +IDG K G
Sbjct: 444 HNHMIQAGCS---------------------------------PNVVTYTTLIDGLCKEG 470
Query: 214 EVEAANEVFVNM----PDKNVGSWNAMISGLARCGMIENARTL---FDEMG-ERDEISWS 265
++++ANE+ M N+ ++N++++GL + G IE A L F+ G D ++++
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 530
Query: 266 AIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERN 325
++D Y K +A E+ +M + ++P+ ++ G L+ G + +++
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 590
Query: 326 SIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREV----STWNAMIGGLAIHGRAEDA 381
I +A +L+ Y L A +++ M R V T+ ++ G ++A
Sbjct: 591 GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 650
Query: 382 MKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKR 425
LF +M G+ + T+ ++ +F+ M+R
Sbjct: 651 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRR 694
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 111/251 (44%), Gaps = 45/251 (17%)
Query: 94 PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQF 153
PNV + G + G+ A H+M + +PN FTY ++ +G+++E V+
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDES-GK-TQTDVICWNAMIDGY-- 209
GL D + + Y G +A+++L E GK Q ++ +N +++G+
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 210 ---LKCGE------------------------------VEAANEVFVNMPDKNVG----S 232
L+ GE ++AA ++ +M + VG +
Sbjct: 574 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Query: 233 WNAMISGLARCGMIENARTLFDEM-GERDEIS---WSAIIDGYIKQRCFKEALEVFHQMQ 288
+ ++ G + ++ A LF EM G+ +S +S +I G++K++ F EA EVF QM+
Sbjct: 634 YENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693
Query: 289 REKIKPSRHLL 299
RE + + +
Sbjct: 694 REGLAADKEIF 704
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 119/535 (22%), Positives = 237/535 (44%), Gaps = 59/535 (11%)
Query: 90 CIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKE 149
C P + N+ ++ ++ A + +M +PN+FT+ L + G +
Sbjct: 141 CGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDK 200
Query: 150 GVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLD---ESGKTQTDVICWNAMI 206
G++ + G+ + I + + + G ++ KM++ E G D++ +N+ I
Sbjct: 201 GLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLV-PDIVTFNSRI 259
Query: 207 DGYLKCGEVEAANEVFVNM--------PDKNVGSWNAMISGLARCGMIENARTLFDEMGE 258
K G+V A+ +F +M P N ++N M+ G + G++E+A+TLF+ + E
Sbjct: 260 SALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRE 319
Query: 259 RDEI----SWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQ 314
D++ S++ + G ++ F EA V QM + I PS + ++ +G L
Sbjct: 320 NDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSD 379
Query: 315 GRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMK----VREVSTWNAMIG 370
+ I ++RN + DAV L+ Y G++D A + ++M + T N ++
Sbjct: 380 AKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLH 439
Query: 371 GLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIE 430
L GR +A +L KMN + + VT +++ +G +++ + + M+
Sbjct: 440 SLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRV----- 494
Query: 431 PEMEHFGCVVDLLGRA--GLVEEAEKFIESMPVKPNVAVWGALLNA-CRIHGNVELGERV 487
H + LG + GLV+++ IE+ + P++ + LLN C+ E
Sbjct: 495 ----HGSAALGNLGNSYIGLVDDS--LIENNCL-PDLITYSTLLNGLCKAGRFAEAKNLF 547
Query: 488 GWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERG----IETVPGSSMMDMGG 543
++ + +S Y + + + K G+ RV K M+++G +ET S ++ +G
Sbjct: 548 AEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETY-NSLILGLGI 606
Query: 544 KVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPN----TSMVSYDIEEEEKE 594
K F+ + +MD+++ +G SPN + + Y E E+ E
Sbjct: 607 KNQIFE---------------IHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVE 646
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 111/566 (19%), Positives = 215/566 (37%), Gaps = 119/566 (21%)
Query: 84 ATKVFDCIP----RPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFK 139
A ++FD +P +PN F I ++G + G K + + M PNK Y T+
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVS 225
Query: 140 ACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKM-----LDES-G 193
+ G + + + ++GL D+ ++ I G +A ++ LDE G
Sbjct: 226 SFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLG 285
Query: 194 KTQTDVICWNAMIDGYLKCGEVEAANEVFVN----------------------------- 224
+ + I +N M+ G+ K G +E A +F +
Sbjct: 286 LPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEA 345
Query: 225 ------MPDKNVG----SWNAMISGLARCGMIENARTLFDEMGER----DEISWSAIIDG 270
M DK +G S+N ++ GL + GM+ +A+T+ M D +++ ++ G
Sbjct: 346 ETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHG 405
Query: 271 YIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVD 330
Y A + +M R P+ + +L +G + + + + +D
Sbjct: 406 YCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLD 465
Query: 331 AVLGTALIDMYVKCGRLDMAWEVFEKMKVR---------------------------EVS 363
V ++D G LD A E+ + M+V ++
Sbjct: 466 TVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLI 525
Query: 364 TWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVER-------- 415
T++ ++ GL GR +A LF +M GEK +P+ V + ++ G +
Sbjct: 526 TYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDM 585
Query: 416 -----------------GLGLFNSMKRVYEIEPEMEH---------FGCVVDLLGRAGLV 449
GLG+ N + ++ + EM+ + + L V
Sbjct: 586 EKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKV 645
Query: 450 EEAEKFIESM---PVKPNVAVWGALLNA-CRIHGNVELGERVGWILLDMEPRNSGRYALL 505
E+A ++ M + PNV + L+ A C++ + ++ + V + + + G Y+L+
Sbjct: 646 EDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVP-DFDMAQEVFETAVSICGQKEGLYSLM 704
Query: 506 SNIYAKAGRWDDVARVRKLMKERGIE 531
N AG+ + + + +RG E
Sbjct: 705 FNELLAAGQLLKATELLEAVLDRGFE 730
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 145/306 (47%), Gaps = 14/306 (4%)
Query: 115 AISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQ 174
A++ + +M RPN TY +L G + Q + ++++ + ++ +A I
Sbjct: 279 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 338
Query: 175 MYASFGLFREARKMLDESGK--TQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKN--- 229
+ G F EA K+ D+ K D+ +N++++G+ ++ A ++F M K+
Sbjct: 339 AFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFP 398
Query: 230 -VGSWNAMISGLARCGMIENARTLFDEMGER----DEISWSAIIDGYIKQRCFKEALEVF 284
V ++N +I G + +E+ LF EM R D ++++ +I G A +VF
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 458
Query: 285 HQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKC 344
QM + + P +L N G L++ + +++++ I++D + T +I+ K
Sbjct: 459 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 518
Query: 345 GRLDMAWEVFEKMKVR----EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTF 400
G++D W++F + ++ V T+N MI GL ++A L KM + PN T+
Sbjct: 519 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTY 578
Query: 401 VGVLNA 406
++ A
Sbjct: 579 NTLIRA 584
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 112/519 (21%), Positives = 214/519 (41%), Gaps = 53/519 (10%)
Query: 92 PRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGV 151
P P++ N L + + IS KM L +TY L + +
Sbjct: 81 PLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLAL 140
Query: 152 QFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKT--QTDVICWNAMIDGY 209
++K G + S+ + Y +A ++D+ + + D I + +I G
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
Query: 210 LKCGEVEAANEVFVNMPDK----NVGSWNAMISGLARCGMIENARTLFDEMG----ERDE 261
+ A + M + N+ ++ +++GL + G + A L ++M E D
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADV 260
Query: 262 ISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSF 321
+ ++ IID K R +AL +F +M+ + I+P+ S+++ + G + S
Sbjct: 261 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 320
Query: 322 VERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVS----TWNAMIGGLAIHGR 377
+ I + V ALID +VK G+ A ++++ M R + T+N+++ G +H R
Sbjct: 321 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR 380
Query: 378 AEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFG 437
+ A ++F M + P+ VT+ ++ + VE G LF EM H G
Sbjct: 381 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR----------EMSHRG 430
Query: 438 CVVDLLGRAGLVE---------EAEKFIESM---PVKPNVAVWGALLNACRIHGNVELGE 485
V D + L++ A+K + M V P++ + LL+ +G +E
Sbjct: 431 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 490
Query: 486 RVGWILLDMEPR-NSGRYALLSNIYAKAGRWDDVARVRKLMKERGIE--TVPGSSMMDMG 542
V + E + + Y + KAG+ DD + + +G++ V ++M+
Sbjct: 491 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS-- 548
Query: 543 GKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNT 581
G S ++E Y +L+KM + +G PN+
Sbjct: 549 --------GLCSKRLLQEAYALLKKMKE----DGPLPNS 575
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 191/402 (47%), Gaps = 25/402 (6%)
Query: 95 NVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFH 154
+++ CN+ + ++ +P+ A S KMM L P+ T+ +L + ++E +
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV 165
Query: 155 AFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLD--ESGKTQTDVICWNAMIDGYLKC 212
+V+ G+ DV + + I G A + D E+ + DV+ + ++++G
Sbjct: 166 NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNS 225
Query: 213 GEVEAANEVFVNMPDK----NVGSWNAMISGLARCGMIENARTLFDEMGER----DEISW 264
G A+ + M + +V ++NA+I + G +A L++EM + ++
Sbjct: 226 GRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTY 285
Query: 265 SAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVER 324
+++I+G+ + C EA ++F+ M+ + P S++ +D I + +
Sbjct: 286 TSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQ 345
Query: 325 NSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR----EVSTWNAMIGGLAIHGRAED 380
+ + + T LI + + G+ ++A EVF M R + T+N ++ L +G+ +
Sbjct: 346 KGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKK 405
Query: 381 AMKLFTKMNGEKRKPNGV-----TFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEH 435
A+ +F M +KR+ +GV T+ +L+ + G +E+ L +F M++ E++ +
Sbjct: 406 ALMIFEDM--QKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRK-REMDIGIIT 462
Query: 436 FGCVVDLLGRAGLVEEAEKFIESMP---VKPNVAVWGALLNA 474
+ ++ + +AG V+ A S+P VKPNV + +++
Sbjct: 463 YTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISG 504
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/418 (19%), Positives = 177/418 (42%), Gaps = 54/418 (12%)
Query: 61 HDHFVSGTLLKCYANPN--FNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISC 118
HD + L+ C+ + + + K+ P++ + G +A+S
Sbjct: 105 HDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSM 164
Query: 119 YHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYAS 178
++M+ + +P+ Y T+ + G V + + G+ DV + ++ + +
Sbjct: 165 VNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCN 224
Query: 179 FGLFREARKMLD--ESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPD----KNVGS 232
G +R+A +L K + DVI +NA+ID ++K G+ A E++ M N+ +
Sbjct: 225 SGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFT 284
Query: 233 WNAMISGLARCGMIENARTLFDEMGER----DEISWSAIIDGYIKQRCFKEALEVFHQMQ 288
+ ++I+G G ++ AR +F M + D ++++++I+G+ K + +A+++F++M
Sbjct: 285 YTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMS 344
Query: 289 REKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLD 348
++ + + +++ VG + + + S + + + L+ G++
Sbjct: 345 QKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVK 404
Query: 349 MAWEVFEKMKVREVS-------TWNAMIGGLAIHGRAE---------------------- 379
A +FE M+ RE+ T+N ++ GL +G+ E
Sbjct: 405 KALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYT 464
Query: 380 -------------DAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMK 424
+A+ LF + + KPN VT+ +++ G+ LF MK
Sbjct: 465 IIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMK 522
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 124/284 (43%), Gaps = 13/284 (4%)
Query: 93 RPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQ 152
+P+V N + ++ G+ A Y++M+ ++ PN FTY +L + G V E Q
Sbjct: 244 KPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQ 303
Query: 153 FHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDE-SGKTQT-DVICWNAMIDGYL 210
+ +G DV ++ I + +A K+ E S K T + I + +I G+
Sbjct: 304 MFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFG 363
Query: 211 KCGEVEAANEVFVNMPDK----NVGSWNAMISGLARCGMIENARTLFDEMGERDEI---- 262
+ G+ A EVF +M + N+ ++N ++ L G ++ A +F++M +R+
Sbjct: 364 QVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAP 423
Query: 263 ---SWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIH 319
+++ ++ G ++AL VF M++ ++ ++ G + +
Sbjct: 424 NIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLF 483
Query: 320 SFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVS 363
+ ++ + V T +I + G A +F KMK VS
Sbjct: 484 CSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/317 (19%), Positives = 132/317 (41%), Gaps = 52/317 (16%)
Query: 277 FKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTA 336
F EAL++F M + PS +L V A + D + ++ + D
Sbjct: 53 FNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNL 112
Query: 337 LIDMYVKCGRLDMAWEVFEKMKVR----EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEK 392
L++ + + + +A KM ++ T+ ++I G + R E+AM + +M
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172
Query: 393 RKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEA 452
KP+ V + ++++ G V L LF+ M+ Y I P++ + +V+ L +G +A
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMEN-YGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 453 E-----------------------------KFIES---------MPVKPNVAVWGALLNA 474
+ KF+++ M + PN+ + +L+N
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 475 CRIHGNVELGERVGWILLDMEPR----NSGRYALLSNIYAKAGRWDDVARVRKLMKERGI 530
+ G V+ ++ ++ ME + + Y L N + K + DD ++ M ++G+
Sbjct: 292 FCMEGCVDEARQMFYL---METKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL 348
Query: 531 --ETVPGSSMMDMGGKV 545
T+ ++++ G+V
Sbjct: 349 TGNTITYTTLIQGFGQV 365
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 111/492 (22%), Positives = 222/492 (45%), Gaps = 35/492 (7%)
Query: 62 DHFVSGTLLKCYANPNFNNFTLATKVFDCIP----RPNVFVCNIYLKGSIENGEP-HKAI 116
D + +L+ +AN + A VF + +P + N+ L + G P +K
Sbjct: 207 DVYSYTSLISAFANSG--RYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKIT 264
Query: 117 SCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMY 176
S KM P+ +TY TL C +E Q + G + D +A + +Y
Sbjct: 265 SLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVY 324
Query: 177 ASFGLFREARKMLDES--GKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDK----NV 230
+EA K+L+E ++ +N++I Y + G ++ A E+ M +K +V
Sbjct: 325 GKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDV 384
Query: 231 GSWNAMISGLARCGMIENARTLFDEM---GERDEI-SWSAIIDGYIKQRCFKEALEVFHQ 286
++ ++SG R G +E+A ++F+EM G + I +++A I Y + F E +++F +
Sbjct: 385 FTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDE 444
Query: 287 MQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGR 346
+ + P ++L V G + + ++R + LI Y +CG
Sbjct: 445 INVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 504
Query: 347 LDMAWEVFEKM----KVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVG 402
+ A V+ +M ++ST+N ++ LA G E + K+ +M + KPN +T+
Sbjct: 505 FEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCS 564
Query: 403 VLNACAHAGMVERGLGLFNSM-KRVYE--IEPEMEHFGCVVDLLGRAGLVEEAEKFIESM 459
+L+A A+ + +GL +S+ + VY IEP +V + + L+ EAE+ +
Sbjct: 565 LLHAYANG----KEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSEL 620
Query: 460 PVK---PNVAVWGALLNACRIHGNVELGERVGWILLDMEPRN-SGRYALLSNIYAKAGRW 515
+ P++ ++++ I+G ++ + +L M+ R + A +++ R
Sbjct: 621 KERGFSPDITTLNSMVS---IYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRS 677
Query: 516 DDVARVRKLMKE 527
D + ++++E
Sbjct: 678 ADFGKSEEILRE 689
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 169/370 (45%), Gaps = 24/370 (6%)
Query: 145 GSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREAR---KMLDESGKTQTDVIC 201
G V + + G + DV+ ++ I +A+ G +REA K ++E G T +I
Sbjct: 187 GRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPT-LIT 245
Query: 202 WNAMIDGYLKCGEV-EAANEVFVNMPDKNVG----SWNAMISGLARCGMIENARTLFDEM 256
+N +++ + K G + M + ++N +I+ R + + A +F+EM
Sbjct: 246 YNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEM 305
Query: 257 G----ERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSL 312
D+++++A++D Y K KEA++V ++M PS S+++ A G L
Sbjct: 306 KAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGML 365
Query: 313 DQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMK----VREVSTWNAM 368
D+ + + + + D T L+ + + G+++ A +FE+M+ + T+NA
Sbjct: 366 DEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAF 425
Query: 369 IGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYE 428
I G+ + MK+F ++N P+ VT+ +L GM G+F MKR
Sbjct: 426 IKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGF 485
Query: 429 IEPEMEHFGCVVDLLGRAGLVEEAEKFIESM---PVKPNVAVWGALLNACRIHGNVELGE 485
+ PE E F ++ R G E+A M V P+++ + +L A G E E
Sbjct: 486 V-PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSE 544
Query: 486 RVGWILLDME 495
+V L +ME
Sbjct: 545 KV---LAEME 551
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/356 (20%), Positives = 151/356 (42%), Gaps = 20/356 (5%)
Query: 69 LLKCYANPNFNNFTLATKVFD----CIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMV 124
+K Y N FT K+FD C P++ N L +NG + + +M
Sbjct: 425 FIKMYGNRG--KFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR 482
Query: 125 LNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFRE 184
P + T+ TL A + GS ++ + + ++ G+T D+ + + A G++ +
Sbjct: 483 AGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQ 542
Query: 185 ARKMLD--ESGKTQTDVICWNAMIDGYLKCGEV----EAANEVFVNMPDKNVGSWNAMIS 238
+ K+L E G+ + + + + +++ Y E+ A EV+ + + ++
Sbjct: 543 SEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVL 602
Query: 239 GLARCGMIENARTLFDEMGER----DEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKP 294
++C ++ A F E+ ER D + ++++ Y +++ +A V M+ P
Sbjct: 603 VCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTP 662
Query: 295 SRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVF 354
S S++ + + + I + I+ D + +I Y + R+ A +F
Sbjct: 663 SMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIF 722
Query: 355 EKMK----VREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNA 406
+M+ V +V T+N IG A E+A+ + M +PN T+ +++
Sbjct: 723 SEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDG 778
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 191/414 (46%), Gaps = 33/414 (7%)
Query: 94 PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQF 153
PNV I +KG ++G ++A Y +++ P+ TY +L G+++ G
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFGL----FREARKMLDESGKTQTDVICWNAMIDGY 209
+ ++K G DV I + + GL R + KML +S + +V+ +N++IDG+
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS--IRLNVVVFNSLIDGW 506
Query: 210 LKCGEVEAANEVFVNM------PDKNVGSWNAMISGLARCGMIENARTLFDEMG----ER 259
+ + A +VF M PD V ++ ++ G +E A LF M E
Sbjct: 507 CRLNRFDEALKVFRLMGIYGIKPD--VATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEP 564
Query: 260 DEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSR---HLLPSMLTVCANVGSLDQGR 316
D +++ +ID + K L++F MQR KI +++ +L C + D +
Sbjct: 565 DALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIE--DASK 622
Query: 317 WIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVS----TWNAMIGGL 372
+ ++ +E ++ D V +I Y RLD A +FE +KV T +I L
Sbjct: 623 FFNNLIE-GKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVL 681
Query: 373 AIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPE 432
+ + A+++F+ M + KPN VT+ +++ + + +E LF M+ I P
Sbjct: 682 CKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQE-KGISPS 740
Query: 433 MEHFGCVVDLLGRAGLVEEAEK-FIESMPVK--PNVAVWGALLNA-CRIHGNVE 482
+ + ++D L + G V+EA F +++ K P+V + L+ C++ VE
Sbjct: 741 IVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVE 794
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 115/530 (21%), Positives = 226/530 (42%), Gaps = 80/530 (15%)
Query: 83 LATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACA 142
L + V DC P PNV + G + GE +A + M P+ Y TL
Sbjct: 273 LLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYF 332
Query: 143 VTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICW 202
G + G + + + +G+ D V+ +
Sbjct: 333 KAGMLGMGHKLFSQALHKGVKLD---------------------------------VVVF 359
Query: 203 NAMIDGYLKCGEVEAANEVFVNM----PDKNVGSWNAMISGLARCGMIENARTLFDEMGE 258
++ ID Y+K G++ A+ V+ M NV ++ +I GL + G I A ++ ++ +
Sbjct: 360 SSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK 419
Query: 259 R----DEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQ 314
R +++S++IDG+ K + ++ M + P + ++ G Q
Sbjct: 420 RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD-----GLSKQ 474
Query: 315 GRWIHSF-----VERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR----EVSTW 365
G +H+ + SI+++ V+ +LID + + R D A +VF M + +V+T+
Sbjct: 475 GLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATF 534
Query: 366 NAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKR 425
++ + GR E+A+ LF +M +P+ + + +++A GL LF+ M+R
Sbjct: 535 TTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQR 594
Query: 426 VYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESM---PVKPNVAVWGALLNACRIHGNVE 482
+I ++ V+ LL + +E+A KF ++ ++P++ + ++ ++
Sbjct: 595 -NKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLD 653
Query: 483 LGERVGWILLDMEP--RNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIE--TVPGSSM 538
ER+ + LL + P N+ +L ++ K D R+ +M E+G + V +
Sbjct: 654 EAERI-FELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCL 712
Query: 539 MDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTSMVSYDI 588
MD K + + K+ +++Q +G SP S+VSY I
Sbjct: 713 MDWFSKSVDIEGS--------------FKLFEEMQEKGISP--SIVSYSI 746
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 122/309 (39%), Gaps = 49/309 (15%)
Query: 78 FNNFTLATKVFDCIP----RPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFT 133
N F A KVF + +P+V ++ SI G +A+ + +M + P+
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALA 568
Query: 134 YPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDE-- 191
Y TL A G+Q + + ++ D+ + + I + +A K +
Sbjct: 569 YCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI 628
Query: 192 SGKTQTDVICWNAMIDGYL-----------------------------------KCGEVE 216
GK + D++ +N MI GY K +++
Sbjct: 629 EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMD 688
Query: 217 AANEVFVNMPDK----NVGSWNAMISGLARCGMIENARTLFDEMGER----DEISWSAII 268
A +F M +K N ++ ++ ++ IE + LF+EM E+ +S+S II
Sbjct: 689 GAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIII 748
Query: 269 DGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQ 328
DG K+ EA +FHQ K+ P ++ VG L + ++ + RN ++
Sbjct: 749 DGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 808
Query: 329 VDAVLGTAL 337
D +L AL
Sbjct: 809 PDDLLQRAL 817
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/430 (20%), Positives = 189/430 (43%), Gaps = 17/430 (3%)
Query: 61 HDHFVSGTLLKCYANPNFNNFTLAT--KVFDCIPRPNVFVCNIYLKGSIENGEPHKAISC 118
HD + + C+ + + LA K+ P++ + L G + A++
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175
Query: 119 YHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYAS 178
+M+ + +P+ FT+ TL + E V +V++G D+ +
Sbjct: 176 VDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK 235
Query: 179 FGLFREARKMLD--ESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDK----NVGS 232
G A +L+ E+ + + +V+ +N +ID K VE A ++F M K NV +
Sbjct: 236 RGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVT 295
Query: 233 WNAMISGLARCGMIENARTLFDEMGER----DEISWSAIIDGYIKQRCFKEALEVFHQMQ 288
+N++I+ L G +A L M E+ + ++++A+ID + K+ EA ++ +M
Sbjct: 296 YNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMI 355
Query: 289 REKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLD 348
+ I P ++ LD+ + + F+ + LI+ + KC R++
Sbjct: 356 QRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVE 415
Query: 349 MAWEVFEKMKVR----EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVL 404
E+F +M R T+ +I G G + A +F +M + + +T+ +L
Sbjct: 416 DGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILL 475
Query: 405 NACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPN 464
+ G ++ L +F +++ E+E + + +++ + +AG V EA S+ +KP+
Sbjct: 476 HGLCSYGKLDTALVIFKYLQK-SEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPD 534
Query: 465 VAVWGALLNA 474
V + +++
Sbjct: 535 VVTYNTMISG 544
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 154/337 (45%), Gaps = 15/337 (4%)
Query: 93 RPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQ 152
+ NV + N + + A+ + +M RPN TY +L G + +
Sbjct: 255 KANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASR 314
Query: 153 FHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDE--SGKTQTDVICWNAMIDGYL 210
+ ++++ + +V +A I + G EA K+ +E D I +N +I+G+
Sbjct: 315 LLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFC 374
Query: 211 KCGEVEAANEVFVNMPDK----NVGSWNAMISGLARCGMIENARTLFDEMGER----DEI 262
++ A ++F M K N+ ++N +I+G +C +E+ LF EM +R + +
Sbjct: 375 MHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV 434
Query: 263 SWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFV 322
+++ II G+ + A VF QM ++ +L + G LD I ++
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL 494
Query: 323 ERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR-EVSTWNAMIGGLAIHGRAEDA 381
+++ ++++ + +I+ K G++ AW++F + ++ +V T+N MI GL ++A
Sbjct: 495 QKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEA 554
Query: 382 MKLFTKMNGEKRKPNGVTFVGVLNA----CAHAGMVE 414
LF KM + PN T+ ++ A C A E
Sbjct: 555 DDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAE 591
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 155/351 (44%), Gaps = 20/351 (5%)
Query: 92 PRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGV 151
P P++ N L + + IS +M L + +TY + +
Sbjct: 79 PFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLAL 138
Query: 152 QFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKT--QTDVICWNAMIDGY 209
A ++K G D+ S+ + Y +A ++D+ + + D + +I G
Sbjct: 139 AVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL 198
Query: 210 L---KCGEVEAANEVFVN---MPDKNVGSWNAMISGLARCGMIENARTLFDEMG----ER 259
K E A + V PD + ++ +++GL + G I+ A L ++M +
Sbjct: 199 FLHNKASEAVALVDQMVQRGCQPD--LVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKA 256
Query: 260 DEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSL-DQGRWI 318
+ + ++ IID K R + A+++F +M+ + I+P+ S++ N G D R +
Sbjct: 257 NVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLL 316
Query: 319 HSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVS----TWNAMIGGLAI 374
+ +E+ I + V ALID + K G+L A ++ E+M R + T+N +I G +
Sbjct: 317 SNMLEK-KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCM 375
Query: 375 HGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKR 425
H R ++A ++F M + PN T+ ++N VE G+ LF M +
Sbjct: 376 HNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQ 426
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 140/314 (44%), Gaps = 22/314 (7%)
Query: 258 ERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSML--TVCANVGSLDQG 315
E D ++ S++++GY + +A+ + QM KP +++ N S +
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS-EAV 208
Query: 316 RWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVST----WNAMIGG 371
+ V+R Q D V +++ K G +D+A + KM+ + +N +I
Sbjct: 209 ALVDQMVQRGC-QPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDS 267
Query: 372 LAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEP 431
L + E A+ LFT+M + +PN VT+ ++N + G L ++M +I P
Sbjct: 268 LCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE-KKINP 326
Query: 432 EMEHFGCVVDLLGRAGLVEEAEKFIESM---PVKPNVAVWGALLNACRIHGNVELGERVG 488
+ F ++D + G + EAEK E M + P+ + L+N +H ++ +++
Sbjct: 327 NVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMF 386
Query: 489 WILL--DMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGI--ETVPGSSMMDMGGK 544
++ D P N Y L N + K R +D + + M +RG+ TV ++++
Sbjct: 387 KFMVSKDCLP-NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ---- 441
Query: 545 VHEFKMGDSSHPQM 558
F+ GD QM
Sbjct: 442 -GFFQAGDCDSAQM 454
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 187/412 (45%), Gaps = 22/412 (5%)
Query: 83 LATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACA 142
L K+ P P++ + L ++ IS +H M V + ++Y +
Sbjct: 56 LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC 115
Query: 143 VTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLD--ESGKTQTDVI 200
+ ++K G DV S+ I + +A ++ E + DV+
Sbjct: 116 RCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 175
Query: 201 CWNAMIDGYLKCGEVEAANEVFVNMPDKNVG----SWNAMISGLARCGMIENARTLFDEM 256
+N +IDG K G V A E+F M V ++N++++GL G +A L +M
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235
Query: 257 GERD----EISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSL 312
RD I+++A+ID ++K+ F EA++++ +M R + P S++ G +
Sbjct: 236 VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRV 295
Query: 313 DQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR----EVSTWNAM 368
D+ + + + D V LI+ + K R+D ++F +M R + T+N +
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 355
Query: 369 IGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYE 428
I G GR + A ++F++M+ +PN T+ +L VE+ L LF +M++ E
Sbjct: 356 IQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQK-SE 411
Query: 429 IEPEMEHFGCVVDLLGRAGLVEEAEKFIESMP---VKPNVAVWGALLNA-CR 476
IE ++ + V+ + + G VE+A S+ +KP+V + +++ CR
Sbjct: 412 IELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCR 463
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 156/339 (46%), Gaps = 19/339 (5%)
Query: 72 CYANPNFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNK 131
C N F+ L +K+ + RP+V + N + GS + G + A+ + +M R +
Sbjct: 150 CQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADA 209
Query: 132 FTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDE 191
TY +L +G + + +V + + +V +A I ++ G F EA K+ +E
Sbjct: 210 VTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEE 269
Query: 192 SGK--TQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDK----NVGSWNAMISGLARCGM 245
+ DV +N++I+G G V+ A ++ M K +V ++N +I+G +
Sbjct: 270 MTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKR 329
Query: 246 IENARTLFDEMGER----DEISWSAIIDGYIKQRCFKEALEVFHQMQ-REKIKPSRHLLP 300
++ LF EM +R D I+++ II GY + A E+F +M R I+ LL
Sbjct: 330 VDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLY 389
Query: 301 SMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR 360
+ C N +++ + ++++ I++D +I K G ++ AW++F + +
Sbjct: 390 GL---CMN-WRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCK 445
Query: 361 ----EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKP 395
+V ++ MI G + + + L+ KM + P
Sbjct: 446 GLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 149/300 (49%), Gaps = 19/300 (6%)
Query: 198 DVICWNAMIDGYLKCGEVEAANEVFVNM------PDKNVGSWNAMISGLARCGMIENART 251
D+ +N +I+ +C A V M PD V + +++I+G + + +A
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPD--VVTVSSLINGFCQGNRVFDAID 160
Query: 252 L---FDEMGER-DEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLT-VC 306
L +EMG R D + ++ IIDG K +A+E+F +M+R+ ++ S++ +C
Sbjct: 161 LVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLC 220
Query: 307 ANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR----EV 362
+ D R + V R+ I + + TA+ID++VK G+ A +++E+M R +V
Sbjct: 221 CSGRWSDAARLMRDMVMRD-IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDV 279
Query: 363 STWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNS 422
T+N++I GL +HGR ++A ++ M + P+ VT+ ++N + V+ G LF
Sbjct: 280 FTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFRE 339
Query: 423 MKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVE 482
M + + + + ++ +AG + A++ M +PN+ + LL ++ VE
Sbjct: 340 MAQ-RGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVE 398
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 123/300 (41%), Gaps = 50/300 (16%)
Query: 277 FKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTA 336
+E +++F +M + + PS +L+ A + D + +E I D
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 337 LIDMYVKCGRLDMAWEVFEKMKV----REVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEK 392
+I+ +C R +A V KM +V T +++I G R DA+ L +KM
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 393 RKPNGVTFVGVLNACAHAGMVERGLGLFNSMKR--------------------------- 425
+P+ V + +++ G+V + LF+ M+R
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 426 -------VYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMP---VKPNVAVWGALLNAC 475
+ +I P + F V+D+ + G EA K E M V P+V + +L+N
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 476 RIHGNVELGERVGWILLDMEPR-----NSGRYALLSNIYAKAGRWDDVARVRKLMKERGI 530
+HG V+ ++ +LD+ + Y L N + K+ R D+ ++ + M +RG+
Sbjct: 290 CMHGRVDEAKQ----MLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGL 345
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 117/543 (21%), Positives = 224/543 (41%), Gaps = 77/543 (14%)
Query: 83 LATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACA 142
L + V DC P PNV + G + GE +A + M P+ Y TL
Sbjct: 273 LLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYF 332
Query: 143 VTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREAR---------------- 186
G + G + + + +G+ DV + S+ I +Y G A
Sbjct: 333 KAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVV 392
Query: 187 ------KMLDESGKT---------------QTDVICWNAMIDGYLKCGEVEAANEVFVNM 225
K L + G+ + ++ ++++IDG+ KCG + + ++ +M
Sbjct: 393 TYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452
Query: 226 ------PDKNVGSWNAMISGLARCGMIENA-RTLFDEMGER---DEISWSAIIDGYIKQR 275
PD V + ++ GL++ G++ +A R +G+ + + ++++IDG+ +
Sbjct: 453 IKMGYPPD--VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLN 510
Query: 276 CFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQ------GRWIHSFVERNSIQV 329
F EAL+VF M IKP +++ V + + G + ++RN I
Sbjct: 511 RFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISA 570
Query: 330 DAVLGTALIDMYVKCGRLDMAWEVFE-----KMKVREVSTWNAMIGGLAIHGRAEDAMKL 384
D + +I + KC R++ A + F KM+ ++ T+N MI G R ++A ++
Sbjct: 571 DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKME-PDIVTYNTMICGYCSLRRLDEAERI 629
Query: 385 FTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLG 444
F + PN VT +++ ++ + +F+ M +P +GC++D
Sbjct: 630 FELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS-KPNAVTYGCLMDWFS 688
Query: 445 RAGLVEEAEKFIESMP---VKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPR-NSG 500
++ +E + K E M + P++ + +++ G V+ + +D + +
Sbjct: 689 KSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVV 748
Query: 501 RYALLSNIYAKAGRWDDVARVRKLMKERGI-----------ETVPGSSMMDMGGKVHEFK 549
YA+L Y K GR + A + + M G+ E P +M G VH+
Sbjct: 749 AYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYNPPKWLMSKGVWVHDKP 808
Query: 550 MGD 552
M D
Sbjct: 809 MPD 811
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/481 (22%), Positives = 207/481 (43%), Gaps = 78/481 (16%)
Query: 94 PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAV-TGSVKEGVQ 152
P+VF N + G ++NG+ +A+ +H+M K YP C + G VK +
Sbjct: 641 PDVFTYNTIIFGLVKNGQVKEAMCFFHQM-------KKLVYPDFVTLCTLLPGVVKASLI 693
Query: 153 FHAFVVK----------------QGLTGDVHIKSAGIQMYASF-------GLFRE----- 184
A+ + + L G + + AGI SF G+ R+
Sbjct: 694 EDAYKIITNFLYNCADQPANLFWEDLIGSI-LAEAGIDNAVSFSERLVANGICRDGDSIL 752
Query: 185 ---------------ARKMLDESGK---TQTDVICWNAMIDGYLKCGEVEAANEVFVN-- 224
AR + ++ K Q + +N +I G L+ +E A +VF+
Sbjct: 753 VPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVK 812
Query: 225 ----MPDKNVGSWNAMISGLARCGMIENARTLFDEMG----ERDEISWSAIIDGYIKQRC 276
+PD V ++N ++ + G I+ L+ EM E + I+ + +I G +K
Sbjct: 813 STGCIPD--VATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGN 870
Query: 277 FKEALEVFHQMQREK-IKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGT 335
+AL++++ + ++ P+ ++ + G L + + + + + + +
Sbjct: 871 VDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYN 930
Query: 336 ALIDMYVKCGRLDMAWEVFEKM---KVR-EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGE 391
LI+ + K G D A +F++M VR ++ T++ ++ L + GR ++ + F ++
Sbjct: 931 ILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKES 990
Query: 392 KRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEE 451
P+ V + ++N + +E L LFN MK I P++ + ++ LG AG+VEE
Sbjct: 991 GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEE 1050
Query: 452 AEKF---IESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLD--MEPRNSGRYALLS 506
A K I+ ++PNV + AL+ + G E V ++ P N+G Y L
Sbjct: 1051 AGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSP-NTGTYEQLP 1109
Query: 507 N 507
N
Sbjct: 1110 N 1110
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 171/389 (43%), Gaps = 24/389 (6%)
Query: 114 KAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGI 173
+A+ Y +M++ RP+ TY +L + + + GL +V+ + I
Sbjct: 206 EAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICI 265
Query: 174 QMYASFGLFREARKML---DESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM----- 225
++ G EA ++L D+ G DV+ + +ID +++ A EVF M
Sbjct: 266 RVLGRAGKINEAYEILKRMDDEG-CGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRH 324
Query: 226 -PDKNVGSWNAMISGLARCGMIENARTLFDEMGER----DEISWSAIIDGYIKQRCFKEA 280
PD+ ++ ++ + +++ + + EM + D ++++ ++D K F EA
Sbjct: 325 KPDRV--TYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEA 382
Query: 281 LEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDM 340
+ M+ + I P+ H +++ V LD + +E ++ A ID
Sbjct: 383 FDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDY 442
Query: 341 YVKCGRLDMAWEVFEKMKVREVS----TWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPN 396
Y K G A E FEKMK + ++ NA + LA GR +A ++F + P+
Sbjct: 443 YGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPD 502
Query: 397 GVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKF- 455
VT+ ++ + G ++ + L + M EP++ +++ L +A V+EA K
Sbjct: 503 SVTYNMMMKCYSKVGEIDEAIKLLSEMME-NGCEPDVIVVNSLINTLYKADRVDEAWKMF 561
Query: 456 --IESMPVKPNVAVWGALLNACRIHGNVE 482
++ M +KP V + LL +G ++
Sbjct: 562 MRMKEMKLKPTVVTYNTLLAGLGKNGKIQ 590
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 112/494 (22%), Positives = 204/494 (41%), Gaps = 59/494 (11%)
Query: 94 PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQF 153
PN+ CN L + G +A ++ + + P+ TY + K + G + E ++
Sbjct: 466 PNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKL 525
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKML--DESGKTQTDVICWNAMIDGYLK 211
+ +++ G DV + ++ I EA KM + K + V+ +N ++ G K
Sbjct: 526 LSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGK 585
Query: 212 CGEVEAANEVFVNMPDK----NVGSWNAMISGLARCGMIENARTLFDEMGER----DEIS 263
G+++ A E+F M K N ++N + L + + A + +M + D +
Sbjct: 586 NGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFT 645
Query: 264 WSAIIDGYIKQRCFKEALEVFHQMQR-------------------EKIKPSRHLLPSMLT 304
++ II G +K KEA+ FHQM++ I+ + ++ + L
Sbjct: 646 YNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLY 705
Query: 305 VCAN----------VGSLDQGRWIH---SFVER---NSI--QVDAVLGTALIDMYVKCGR 346
CA+ +GS+ I SF ER N I D++L +I K
Sbjct: 706 NCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSIL-VPIIRYSCKHNN 764
Query: 347 LDMAWEVFEKMKVR-----EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFV 401
+ A +FEK ++ T+N +IGGL E A +F ++ P+ T+
Sbjct: 765 VSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYN 824
Query: 402 GVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEA----EKFIE 457
+L+A +G ++ L+ M +E E V+ L +AG V++A +
Sbjct: 825 FLLDAYGKSGKIDELFELYKEMS-THECEANTITHNIVISGLVKAGNVDDALDLYYDLMS 883
Query: 458 SMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPR-NSGRYALLSNIYAKAGRWD 516
P +G L++ G + +++ +LD R N Y +L N + KAG D
Sbjct: 884 DRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEAD 943
Query: 517 DVARVRKLMKERGI 530
+ K M + G+
Sbjct: 944 AACALFKRMVKEGV 957
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/451 (21%), Positives = 192/451 (42%), Gaps = 25/451 (5%)
Query: 98 VCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFV 157
CN L+ +G+ + + M + + TY T+FK+ +V G +K+ +
Sbjct: 120 TCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKM 179
Query: 158 VKQGLTGDVHIKSAGIQMYASFGLFREA----RKMLDESGKTQTDVICWNAMIDGYLKCG 213
+ G + + + I + EA R+M+ E + +++++ G K
Sbjct: 180 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQT--YSSLMVGLGKRR 237
Query: 214 EVEAANEVFVNMPD----KNVGSWNAMISGLARCGMIENARTLFDEMGER----DEISWS 265
++++ + M NV ++ I L R G I A + M + D ++++
Sbjct: 238 DIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYT 297
Query: 266 AIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERN 325
+ID R A EVF +M+ + KP R ++L ++ LD + S +E++
Sbjct: 298 VLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKD 357
Query: 326 SIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMK----VREVSTWNAMIGGLAIHGRAEDA 381
D V T L+D K G A++ + M+ + + T+N +I GL R +DA
Sbjct: 358 GHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDA 417
Query: 382 MKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVD 441
++LF M KP T++ ++ +G L F MK I P + +
Sbjct: 418 LELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMK-TKGIAPNIVACNASLY 476
Query: 442 LLGRAGLVEEAEKF---IESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLD--MEP 496
L +AG EA++ ++ + + P+ + ++ G ++ ++ +++ EP
Sbjct: 477 SLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEP 536
Query: 497 RNSGRYALLSNIYAKAGRWDDVARVRKLMKE 527
+L++ +Y KA R D+ ++ MKE
Sbjct: 537 DVIVVNSLINTLY-KADRVDEAWKMFMRMKE 566
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 165/371 (44%), Gaps = 23/371 (6%)
Query: 177 ASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDK----NVGS 232
+SF F+ L+ T+T N M++ G++E VF M + + +
Sbjct: 100 SSFSYFKSVAGNLNLVHTTET----CNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNT 155
Query: 233 WNAMISGLARCGMIENARTLFDEMGE----RDEISWSAIIDGYIKQRCFKEALEVFHQMQ 288
+ + L+ G ++ A +M E + S++ +I +K R EA+EV+ +M
Sbjct: 156 YLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMI 215
Query: 289 REKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLD 348
E +PS S++ +D + +E ++ + T I + + G+++
Sbjct: 216 LEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKIN 275
Query: 349 MAWEVFEKMKVR----EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVL 404
A+E+ ++M +V T+ +I L + + A ++F KM + KP+ VT++ +L
Sbjct: 276 EAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLL 335
Query: 405 NACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESM---PV 461
+ + ++ ++ M++ + P++ F +VD L +AG EA ++ M +
Sbjct: 336 DRFSDNRDLDSVKQFWSEMEKDGHV-PDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGI 394
Query: 462 KPNVAVWGALL-NACRIHGNVELGERVGWI-LLDMEPRNSGRYALLSNIYAKAGRWDDVA 519
PN+ + L+ R+H + E G + L ++P + Y + + Y K+G
Sbjct: 395 LPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKP-TAYTYIVFIDYYGKSGDSVSAL 453
Query: 520 RVRKLMKERGI 530
+ MK +GI
Sbjct: 454 ETFEKMKTKGI 464
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 91/214 (42%), Gaps = 46/214 (21%)
Query: 93 RPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQ 152
RPN + NI + G + GE A + + +M+ RP+ TY L + G V EG+
Sbjct: 923 RPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLH 982
Query: 153 FHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKC 212
+ F+E L ESG DV+C+N +I+G K
Sbjct: 983 Y----------------------------FKE----LKESG-LNPDVVCYNLIINGLGKS 1009
Query: 213 GEVEAANEVFVNM-------PDKNVGSWNAMISGLARCGMIENARTLFDEMG----ERDE 261
+E A +F M PD + ++N++I L GM+E A +++E+ E +
Sbjct: 1010 HRLEEALVLFNEMKTSRGITPD--LYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNV 1067
Query: 262 ISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPS 295
+++A+I GY + A V+ M P+
Sbjct: 1068 FTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 166/376 (44%), Gaps = 47/376 (12%)
Query: 100 NIYLKGSIENGEPHKAISCYHKMMVLNSR-PNKFTYPTLFKACAVTGSVKEGVQFHAFVV 158
N+ + G + G A++ +M + P+++T+ TL G VK ++ ++
Sbjct: 263 NVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVML 322
Query: 159 KQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAA 218
++G DV+ +N++I G K GEV+ A
Sbjct: 323 QEGYDPDVYT---------------------------------YNSVISGLCKLGEVKEA 349
Query: 219 NEVFVNMPDK----NVGSWNAMISGLARCGMIENARTLFDEMGER----DEISWSAIIDG 270
EV M + N ++N +IS L + +E A L + + D +++++I G
Sbjct: 350 VEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 409
Query: 271 YIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVD 330
R + A+E+F +M+ + +P ++ + G LD+ + +E +
Sbjct: 410 LCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS 469
Query: 331 AVLGTALIDMYVKCGRLDMAWEVFEKMKVREVS----TWNAMIGGLAIHGRAEDAMKLFT 386
+ LID + K + A E+F++M+V VS T+N +I GL R EDA +L
Sbjct: 470 VITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMD 529
Query: 387 KMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRA 446
+M E +KP+ T+ +L G +++ + +M EP++ +G ++ L +A
Sbjct: 530 QMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS-NGCEPDIVTYGTLISGLCKA 588
Query: 447 GLVEEAEKFIESMPVK 462
G VE A K + S+ +K
Sbjct: 589 GRVEVASKLLRSIQMK 604
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 151/333 (45%), Gaps = 15/333 (4%)
Query: 94 PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQF 153
P+V+ N + G + GE +A+ +M+ + PN TY TL V+E +
Sbjct: 328 PDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL 387
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDE--SGKTQTDVICWNAMIDGYLK 211
+ +G+ DV ++ IQ R A ++ +E S + D +N +ID
Sbjct: 388 ARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCS 447
Query: 212 CGEVEAANEVFVNMP----DKNVGSWNAMISGLARCGMIENARTLFDEMG----ERDEIS 263
G+++ A + M ++V ++N +I G + A +FDEM R+ ++
Sbjct: 448 KGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVT 507
Query: 264 WSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVE 323
++ +IDG K R ++A ++ QM E KP ++ S+LT G + + I +
Sbjct: 508 YNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMT 567
Query: 324 RNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVS----TWNAMIGGLAIHGRAE 379
N + D V LI K GR+++A ++ ++++ ++ +N +I GL +
Sbjct: 568 SNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTT 627
Query: 380 DAMKLFTKM-NGEKRKPNGVTFVGVLNACAHAG 411
+A+ LF +M + P+ V++ V + G
Sbjct: 628 EAINLFREMLEQNEAPPDAVSYRIVFRGLCNGG 660
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 170/380 (44%), Gaps = 19/380 (5%)
Query: 40 CFHSLQHLKQAHAII---LKTAHFHDHFVSGTLLK--CYANPNFNNFTLATKVFDCIPRP 94
CF + A +I+ LK + D G+L+ C N + +L K+ + +P
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188
Query: 95 NVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFH 154
++ N + + + A + ++ RPN TY L + + +
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 155 AFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQT--DVICWNAMIDGYLKC 212
+ ++K+ +T +V SA + + G EA+++ +E + D++ ++++I+G
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 308
Query: 213 GEVEAANEVFVNMPDK----NVGSWNAMISGLARCGMIENARTLFDEMGER----DEISW 264
++ AN++F M K +V S+N +I+G + +E+ LF EM +R + +++
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368
Query: 265 SAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVER 324
+ +I G+ + +A E F QM I P +L + G L++ I +++
Sbjct: 369 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK 428
Query: 325 NSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR----EVSTWNAMIGGLAIHGRAED 380
+ +D V T +I K G+++ AW +F + ++ ++ T+ M+ GL G +
Sbjct: 429 REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHE 488
Query: 381 AMKLFTKMNGEKRKPNGVTF 400
L+TKM E N T
Sbjct: 489 VEALYTKMKQEGLMKNDCTL 508
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 164/340 (48%), Gaps = 19/340 (5%)
Query: 105 GSIENG-----EPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVK 159
GS+ NG A+S KM+ + +P+ Y + + T V + F + +
Sbjct: 159 GSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIER 218
Query: 160 QGLTGDVHIKSAGIQMYASFGLFREARKMLDE--SGKTQTDVICWNAMIDGYLKCGEVEA 217
+G+ +V +A + + + +A ++L + K +VI ++A++D ++K G+V
Sbjct: 219 KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278
Query: 218 ANEVFVNMP----DKNVGSWNAMISGLARCGMIENARTLFDEMGER----DEISWSAIID 269
A E+F M D ++ +++++I+GL I+ A +FD M + D +S++ +I+
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338
Query: 270 GYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQV 329
G+ K + ++ +++F +M + + + +++ G +D+ + S ++ I
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398
Query: 330 DAVLGTALIDMYVKCGRLDMAWEVFEKMKVRE----VSTWNAMIGGLAIHGRAEDAMKLF 385
D L+ G L+ A +FE M+ RE + T+ +I G+ G+ E+A LF
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Query: 386 TKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKR 425
++ + KP+ VT+ +++ G++ L+ MK+
Sbjct: 459 CSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 164/322 (50%), Gaps = 29/322 (9%)
Query: 196 QTDVICWNAMIDGYLKCGEVEAANEVFVNM------PDK-NVGSWNAMISGLARCGMIEN 248
+ D+ +N +I+ + C +V A + M PD+ +GS +++G R + +
Sbjct: 117 RNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGS---LVNGFCRRNRVSD 173
Query: 249 ARTLFDEMGE----RDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLT 304
A +L D+M E D ++++AIID K + +A + F +++R+ I+P+ +++
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233
Query: 305 -VCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR--- 360
+C + D R + +++ I + + +AL+D +VK G++ A E+FE+M VR
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKK-ITPNVITYSALLDAFVKNGKVLEAKELFEEM-VRMSI 291
Query: 361 --EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLG 418
++ T++++I GL +H R ++A ++F M + + V++ ++N A VE G+
Sbjct: 292 DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMK 351
Query: 419 LFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMP---VKPNVAVWGALLNAC 475
LF M + + + + ++ +AG V++A++F M + P++ + LL
Sbjct: 352 LFREMSQRGLVSNTV-TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 410
Query: 476 RIHGNVELGERVGWILLDMEPR 497
+G + E+ I DM+ R
Sbjct: 411 CDNGEL---EKALVIFEDMQKR 429
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 121/272 (44%), Gaps = 22/272 (8%)
Query: 94 PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQF 153
PNV + L ++NG+ +A + +M+ ++ P+ TY +L + + E Q
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQM 317
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGK--TQTDVICWNAMIDGYLK 211
+V +G DV + I + + K+ E + ++ + +N +I G+ +
Sbjct: 318 FDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377
Query: 212 CGEVEAANEVFVNM------PDKNVGSWNAMISGLARCGMIENARTLFDEMGER----DE 261
G+V+ A E F M PD + ++N ++ GL G +E A +F++M +R D
Sbjct: 378 AGDVDKAQEFFSQMDFFGISPD--IWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDI 435
Query: 262 ISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSF 321
++++ +I G K +EA +F + + +KP +M++ G L + +++
Sbjct: 436 VTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTK 495
Query: 322 VERNSIQV--------DAVLGTALIDMYVKCG 345
+++ + D L LI + CG
Sbjct: 496 MKQEGLMKNDCTLSDGDITLSAELIKKMLSCG 527
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/404 (21%), Positives = 184/404 (45%), Gaps = 18/404 (4%)
Query: 94 PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQF 153
P++ N LKG + G A + +M L P+ FT+ LF + + +
Sbjct: 282 PSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGV 341
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDES---GKTQTDVICWNAMIDGYL 210
+ V G+ + + S + G +A ++L G +VI +N MIDGY
Sbjct: 342 YETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVI-YNTMIDGYC 400
Query: 211 KCGEVEAANEVFVNMPDKNVG----SWNAMISGLARCGMIENARTLFDEM---GERDEI- 262
+ G++ A M + + ++N +I G +ENA ++M G +
Sbjct: 401 RKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVE 460
Query: 263 SWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFV 322
+++ +I GY ++ F + ++ +M+ P+ +++ L + + + +
Sbjct: 461 TYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDM 520
Query: 323 ERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVS----TWNAMIGGLAIHGRA 378
E + + LID G+++ A+ ++M + + T+N +I GL++ G+
Sbjct: 521 EDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKL 580
Query: 379 EDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGC 438
+A L +++ + KP+ T+ +++ AG V+R + L+ MKR I+P ++ +
Sbjct: 581 SEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRS-GIKPTLKTYHL 639
Query: 439 VVDLLGRAGLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVE 482
++ L + G +E E+ M +KP++ V+ +L+ +HG++E
Sbjct: 640 LISLCTKEG-IELTERLFGEMSLKPDLLVYNGVLHCYAVHGDME 682
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/456 (22%), Positives = 187/456 (41%), Gaps = 59/456 (12%)
Query: 115 AISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQ 174
I+ + ++ + RP+KF Y +A V +G++ + + V I + I
Sbjct: 163 TINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLID 222
Query: 175 MYASFGLFREARKMLDE--SGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMP----DK 228
+A ++ DE + + +I +N +IDGY K G E + +V M +
Sbjct: 223 GLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEP 282
Query: 229 NVGSWNAMISGLARCGMIENARTLFDEMGE----RDEISWSAIIDGYIKQRCFKEALEVF 284
++ ++N ++ GL + GM+E+A + EM + D ++S + DGY + AL V+
Sbjct: 283 SLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVY 342
Query: 285 HQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKC 344
+K + + +L G +++ I + + V+ +ID Y +
Sbjct: 343 ETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRK 402
Query: 345 GRL---DMAWEVFEKMKVR-EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTF 400
G L M E EK ++ + +N +I G E+A K KM + P+ T+
Sbjct: 403 GDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETY 462
Query: 401 VGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMP 460
++ G G + ++I EME G +
Sbjct: 463 ----------NILIGGYGRKYEFDKCFDILKEMEDNGTM--------------------- 491
Query: 461 VKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGR----YALLSNIYAKAGRWD 516
PNV +G L+N C G+ L ++ + DME R Y +L + G+ +
Sbjct: 492 --PNVVSYGTLIN-CLCKGSKLLEAQI--VKRDMEDRGVSPKVRIYNMLIDGCCSKGKIE 546
Query: 517 DVARVRKLMKERGIE--TVPGSSMMD---MGGKVHE 547
D R K M ++GIE V ++++D M GK+ E
Sbjct: 547 DAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSE 582
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 100/232 (43%), Gaps = 8/232 (3%)
Query: 263 SWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFV 322
S + ++D +K + F+ + VF + +PS+ + + + + +G + + +
Sbjct: 146 SLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRM 205
Query: 323 ERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREV----STWNAMIGGLAIHGRA 378
+ + I + LID K R++ A ++F++M R + T+N +I G G
Sbjct: 206 KHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNP 265
Query: 379 EDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGC 438
E + K+ +M + +P+ +TF +L AGMVE + MK + + P+ F
Sbjct: 266 EKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFV-PDAFTFSI 324
Query: 439 VVDLLGRAGLVEEAEKFIESM---PVKPNVAVWGALLNACRIHGNVELGERV 487
+ D E A E+ VK N LLNA G +E E +
Sbjct: 325 LFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEI 376
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 99/214 (46%), Gaps = 16/214 (7%)
Query: 199 VICWNAMIDGYLKCGEVEAANEVFVNMPDK----NVGSWNAMISGLARCGMIENARTLFD 254
V +N +IDG G++E A M K N+ ++N +I GL+ G + A L
Sbjct: 529 VRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLL 588
Query: 255 EMGER----DEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVG 310
E+ + D +++++I GY + + ++ +M+R IKP+ ++++C G
Sbjct: 589 EISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG 648
Query: 311 SLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREV----STWN 366
R S++ D ++ ++ Y G ++ A+ + ++M + + +T+N
Sbjct: 649 IELTERLFGEM----SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYN 704
Query: 367 AMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTF 400
++I G G+ + L +MN + +P T+
Sbjct: 705 SLILGQLKVGKLCEVRSLIDEMNAREMEPEADTY 738
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 116/494 (23%), Positives = 205/494 (41%), Gaps = 63/494 (12%)
Query: 94 PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQF 153
P+V CNI LK ++ +KA + Y M+ P T+ T+ +C G ++ +
Sbjct: 201 PSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKI 260
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKM---LDESGKTQTDVICWNAMIDGYL 210
+ ++ + + I ++ G EAR+ + SG T +N +I+GY
Sbjct: 261 WLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPY-SFNPLIEGYC 319
Query: 211 KCGEVEAANEVFVNMPDKNV----GSWNAMISGLARCGMIENARTLFDEMGERDEISWSA 266
K G + A V M + + ++N I L G I++AR L M D +S++
Sbjct: 320 KQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNT 379
Query: 267 IIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNS 326
++ GYIK F EA +F ++ I PS +++ G+L+ + + +
Sbjct: 380 LMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQL 439
Query: 327 IQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR-------------------------- 360
I D + T L+ +VK G L MA EV+++M +
Sbjct: 440 IFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAF 499
Query: 361 --------------EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNA 406
+++ +N I GL G A++ K+ P+ VT+ V+
Sbjct: 500 RLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRG 559
Query: 407 CAHAGMVERGLGLFNSM--KRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMP---V 461
G + L++ M KR+Y P + + ++ +AG +E+A ++ M V
Sbjct: 560 YLENGQFKMARNLYDEMLRKRLY---PSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGV 616
Query: 462 KPNVAVWGALLNACRIHGNVELGERVGWILLDME----PRNSGRYALLSNIYAKAGRWDD 517
+PNV ALL GN++ R L ME P N Y +L + +W++
Sbjct: 617 RPNVMTHNALLYGMCKAGNIDEAYRY---LCKMEEEGIPPNKYSYTMLISKNCDFEKWEE 673
Query: 518 VARVRKLMKERGIE 531
V ++ K M ++ IE
Sbjct: 674 VVKLYKEMLDKEIE 687
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/340 (20%), Positives = 148/340 (43%), Gaps = 19/340 (5%)
Query: 77 NFNNFTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPT 136
+F A ++ + P+V N + G I+ G+ +A + + + P+ TY T
Sbjct: 355 DFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNT 414
Query: 137 LFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGK-- 194
L +G+++ + + Q + DV + ++ + G A ++ DE +
Sbjct: 415 LIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKG 474
Query: 195 TQTDVICWNAMIDGYLKCGEVEAANEVFVNM-------PDKNVGSWNAMISGLARCG--- 244
+ D + G L+ G+ + A + M PD + +N I GL + G
Sbjct: 475 IKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTI--YNVRIDGLCKVGNLV 532
Query: 245 -MIENARTLFDEMGERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSML 303
IE R +F D ++++ +I GY++ FK A ++ +M R+++ PS ++
Sbjct: 533 KAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLI 592
Query: 304 TVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVS 363
A G L+Q + +++ ++ + + AL+ K G +D A+ KM+ +
Sbjct: 593 YGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIP 652
Query: 364 ----TWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVT 399
++ +I + E+ +KL+ +M ++ +P+G T
Sbjct: 653 PNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYT 692
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/374 (18%), Positives = 154/374 (41%), Gaps = 38/374 (10%)
Query: 271 YIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVD 330
Y K+ ++ L F +M R+ PS +L V + +++ ++ + + I
Sbjct: 178 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 237
Query: 331 AVLGTALIDMYVKCGRLDMAWEVFEKMKVREVS----TWNAMIGGLAIHGRAEDAMKLFT 386
+ ++D K G L+ +++ +MK R + T+N +I G + +G+ E+A +
Sbjct: 238 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 297
Query: 387 KMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRA 446
M +F ++ G+ + G+ + M I P + + L
Sbjct: 298 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNA-GIYPTTSTYNIYICALCDF 356
Query: 447 GLVEEAEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILL-------DMEPRNS 499
G +++A + + SM P+V + L+ HG +++G+ V LL D+ P +
Sbjct: 357 GRIDDARELLSSMAA-PDVVSYNTLM-----HGYIKMGKFVEASLLFDDLRAGDIHP-SI 409
Query: 500 GRYALLSNIYAKAGRWDDVARVRKLMKERGI--ETVPGSSMMDMGGKVHEFKMGDSSHPQ 557
Y L + ++G + R+++ M + I + + ++++ K M + +
Sbjct: 410 VTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDE 469
Query: 558 MKEIYLMLEKMMDKLQIEGYSPNTSMVSYDIEEEEKETVLKQHSEKIALAFGLLHAKPGT 617
M + ++ +GY+ T V ++ + + + H E +A H P
Sbjct: 470 M---------LRKGIKPDGYAYTTRAVG-ELRLGDSDKAFRLHEEMVATD----HHAPDL 515
Query: 618 TLHIVKNLRVCADC 631
T++ N+R+ C
Sbjct: 516 TIY---NVRIDGLC 526
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 178/398 (44%), Gaps = 43/398 (10%)
Query: 91 IPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEG 150
IP P + CNI + + +P +A KMM L P+ T+ +L +++
Sbjct: 114 IP-PLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDA 172
Query: 151 VQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYL 210
+ ++ G +V + I+ +C N ++
Sbjct: 173 IALFDQILGMGFKPNVVTYTTLIR------------------------CLCKNRHLNH-- 206
Query: 211 KCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGER----DEISWSA 266
VE N++ N NV ++NA+++GL G +A L +M +R + I+++A
Sbjct: 207 ---AVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTA 263
Query: 267 IIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNS 326
+ID ++K EA E+++ M + + P S++ G LD+ R + +ERN
Sbjct: 264 LIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNG 323
Query: 327 IQVDAVLGTALIDMYVKCGRLDMAWEVFEKMK----VREVSTWNAMIGGLAIHGRAEDAM 382
+ V+ T LI + K R++ ++F +M V T+ +I G + GR + A
Sbjct: 324 CYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQ 383
Query: 383 KLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDL 442
++F +M+ + P+ T+ +L+ G VE+ L +F M++ E++ + + ++
Sbjct: 384 EVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRK-REMDINIVTYTIIIQG 442
Query: 443 LGRAGLVEEAEKFIESM---PVKPNVAVWGALLNA-CR 476
+ + G VE+A S+ +KPNV + +++ CR
Sbjct: 443 MCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 480
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 162/341 (47%), Gaps = 25/341 (7%)
Query: 106 SIENGEPH-----KAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQ 160
S+ NG H AI+ + +++ + +PN TY TL + + V+ +
Sbjct: 158 SLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTN 217
Query: 161 GLTGDVHIKSAGIQMYASFGLFREARKMLDESGK--TQTDVICWNAMIDGYLKCGEVEAA 218
G +V +A + G + +A +L + K + +VI + A+ID ++K G++ A
Sbjct: 218 GSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEA 277
Query: 219 NEVFVNM------PDKNVGSWNAMISGLARCGMIENARTLFDEMGERD-----EISWSAI 267
E++ M PD V ++ ++I+GL G+++ AR +F M ER+ E+ ++ +
Sbjct: 278 KELYNVMIQMSVYPD--VFTYGSLINGLCMYGLLDEARQMFYLM-ERNGCYPNEVIYTTL 334
Query: 268 IDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSI 327
I G+ K + ++ +++F++M ++ + + ++ VG D + + + +
Sbjct: 335 IHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRA 394
Query: 328 QVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVRE----VSTWNAMIGGLAIHGRAEDAMK 383
D L+D G+++ A +FE M+ RE + T+ +I G+ G+ EDA
Sbjct: 395 PPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFD 454
Query: 384 LFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMK 424
LF + + KPN +T+ +++ G++ LF MK
Sbjct: 455 LFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMK 495
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 168/376 (44%), Gaps = 39/376 (10%)
Query: 227 DKNVGSWNAMISGLARCGMIENARTLFDE---MGER-DEISWSAIIDGYIKQRCFKEALE 282
+ ++ ++ ++++G IE+A LFD+ MG + + ++++ +I K R A+E
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVE 209
Query: 283 VFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYV 342
+F+QM +P+ +++T +G W+ + + I+ + + TALID +V
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV 269
Query: 343 KCGRLDMAWEVFE---KMKVR-EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGV 398
K G+L A E++ +M V +V T+ ++I GL ++G ++A ++F M PN V
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEV 329
Query: 399 TFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVD--LLGRAGLVEEAEKFI 456
+ +++ + VE G+ +F M + + + + + L+GR + +E +
Sbjct: 330 IYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM 389
Query: 457 ESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPR----NSGRYALLSNIYAKA 512
S P++ + LL+ +G V E+ I M R N Y ++ K
Sbjct: 390 SSRRAPPDIRTYNVLLDGLCCNGKV---EKALMIFEYMRKREMDINIVTYTIIIQGMCKL 446
Query: 513 GRWDDV-----ARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEK 567
G+ +D + K MK I S G +HE DS +MKE
Sbjct: 447 GKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHE---ADSLFKKMKE------- 496
Query: 568 MMDKLQIEGYSPNTSM 583
+G+ PN S+
Sbjct: 497 -------DGFLPNESV 505
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/475 (23%), Positives = 217/475 (45%), Gaps = 38/475 (8%)
Query: 129 PNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARK- 187
PN TY TL + + + ++ +V +G+ D+ + + + G REA K
Sbjct: 292 PNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKT 351
Query: 188 --MLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDK----NVGSWNAMISGLA 241
ML E + +V+ + A++DG K G++ +A + M +K NV ++++MI+G
Sbjct: 352 FKMLLEDNQVP-NVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYV 410
Query: 242 RCGMIENARTLFDEMGERDEI----SWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRH 297
+ GM+E A +L +M +++ + ++ +IDG K + A+E+ +M+ ++ + +
Sbjct: 411 KKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNY 470
Query: 298 LLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKM 357
+L +++ +G + + + + + + +D + T+LID++ K G + A E+M
Sbjct: 471 ILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEM 530
Query: 358 KVR----EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMV 413
+ R +V ++N +I G+ G+ A + M + +P+ TF ++N+ G
Sbjct: 531 QERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDS 589
Query: 414 ERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIES---MPVKPNVAVWGA 470
E L L++ MK I+P + VV +L G +EEA + M + PN+ +
Sbjct: 590 EGILKLWDKMKSC-GIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRI 648
Query: 471 LLNACRIHGNVELGERVGWILLDMEPRNSGR-YALLSNIYAKAGRWDDVARVRKLMKERG 529
L+ H + + LL + S + Y L K G A V M+ RG
Sbjct: 649 FLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARG 708
Query: 530 I--ETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYSPNTS 582
+TV +S+M H + +G + +M+E G SPN +
Sbjct: 709 FIPDTVTFNSLM------HGYFVGSHVRKALSTYSVMMEA--------GISPNVA 749
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 171/389 (43%), Gaps = 15/389 (3%)
Query: 83 LATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACA 142
+ +K+ C P+VF N+ + + G AIS ++ + TY T+
Sbjct: 116 IYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVI---SIDTVTYNTVISGLC 172
Query: 143 VTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICW 202
G E QF + +VK G+ D + I + G F A+ ++DE ++ ++I
Sbjct: 173 EHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEI--SELNLITH 230
Query: 203 NAMIDGYLKCGEVEAA-NEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGER-- 259
++ Y +E A ++ ++ D +V +++++I+ L + G + L EM E
Sbjct: 231 TILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSV 290
Query: 260 --DEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRW 317
+ ++++ ++D K ++ AL ++ QM I + ++ G L +
Sbjct: 291 YPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEK 350
Query: 318 IHSFVERNSIQVDAVLGTALIDMYVKCGRLDMA----WEVFEKMKVREVSTWNAMIGGLA 373
+ ++ + V TAL+D K G L A ++ EK + V T+++MI G
Sbjct: 351 TFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYV 410
Query: 374 IHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEM 433
G E+A+ L KM + PNG T+ V++ AG E + L M R+ +E
Sbjct: 411 KKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM-RLIGVEENN 469
Query: 434 EHFGCVVDLLGRAGLVEEAEKFIESMPVK 462
+V+ L R G ++E + ++ M K
Sbjct: 470 YILDALVNHLKRIGRIKEVKGLVKDMVSK 498
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 120/277 (43%), Gaps = 11/277 (3%)
Query: 86 KVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTG 145
K+ C +P++ CNI + ENG+ +AI ++MM++ PN TY +
Sbjct: 598 KMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHK 657
Query: 146 SVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLD--ESGKTQTDVICWN 203
+ H ++ G+ + + I G+ ++A ++ E+ D + +N
Sbjct: 658 RADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFN 717
Query: 204 AMIDGYLKCGEVEAANEVFVNMPDK----NVGSWNAMISGLARCGMIENARTLFDEMGER 259
+++ GY V A + M + NV ++N +I GL+ G+I+ EM R
Sbjct: 718 SLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSR 777
Query: 260 ----DEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQG 315
D+ +++A+I G K K ++ ++ +M + + P +++ ANVG + Q
Sbjct: 778 GMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQA 837
Query: 316 RWIHSFVERNSIQVDAVLGTALIDMYVK-CGRLDMAW 351
R + + + + + +I K C D+ W
Sbjct: 838 RELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEW 874
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 101/468 (21%), Positives = 187/468 (39%), Gaps = 69/468 (14%)
Query: 94 PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQF 153
PN F + G + G+ AI +M ++ N + L G +KE
Sbjct: 432 PNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGL 491
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFG---LFREARKMLDESGKTQTDVICWNAMIDGYL 210
+V +G+T D ++ I ++ G + + E G DV+ +N +I G L
Sbjct: 492 VKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPW-DVVSYNVLISGML 550
Query: 211 KCGEVEAANEVFVNMPDK----NVGSWNAMISGLARCGMIENARTLFDEM---GERDEIS 263
K G+V A+ + M +K ++ ++N M++ + G E L+D+M G + +
Sbjct: 551 KFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLM 609
Query: 264 WSAIIDGYIKQRC-FKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFV 322
I+ G + + +EA+ + +QM +I P+ L + H
Sbjct: 610 SCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSK----------HK-- 657
Query: 323 ERNSIQVDAVLGT--ALIDMYVKCGRLDMAWEVFEKMKVREVSTWNAMIGGLAIHGRAED 380
+ DA+ T L+ +K R +N +I L G +
Sbjct: 658 -----RADAIFKTHETLLSYGIKLSR----------------QVYNTLIATLCKLGMTKK 696
Query: 381 AMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVV 440
A + M P+ VTF +++ V + L ++ M I P + + ++
Sbjct: 697 AAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEA-GISPNVATYNTII 755
Query: 441 DLLGRAGLVEEAEKFIESMP---VKPNVAVWGALLNACRIHGNVELGERVGWILLDME-- 495
L AGL++E +K++ M ++P+ + AL I G ++G G + + E
Sbjct: 756 RGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNAL-----ISGQAKIGNMKGSMTIYCEMI 810
Query: 496 -----PRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGIETV-PGSS 537
P+ S L+S +A G+ + + R+L+KE G V P +S
Sbjct: 811 ADGLVPKTSTYNVLISE-FANVGK---MLQARELLKEMGKRGVSPNTS 854
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 109/253 (43%), Gaps = 22/253 (8%)
Query: 233 WNAMISGLARCGMIENARTLFDEMGER----DEISWSAIIDGYIKQRCFKEALEVFHQMQ 288
+N +I+ L + GM + A + +M R D +++++++ GY ++AL + M
Sbjct: 681 YNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMM 740
Query: 289 REKIKPSRHLLPSMLTVCANVGSLDQ-GRWIHSFVERNSIQVDAVLGTALIDMYVKCGRL 347
I P+ +++ ++ G + + +W+ R ++ D ALI K G +
Sbjct: 741 EAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSR-GMRPDDFTYNALISGQAKIGNM 799
Query: 348 DMAWEVFEKM----KVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFV-- 401
+ ++ +M V + ST+N +I A G+ A +L +M PN T+
Sbjct: 800 KGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTM 859
Query: 402 --GVLNACAHAGMV--ERGLGLFNSMKRVYEIEPEMEHFGC------VVDLLGRAGLVEE 451
G+ C H + ++ + L + + E+ E + C + + G+ +
Sbjct: 860 ISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYIPCNQTIYWISAAFSKPGMKVD 919
Query: 452 AEKFIESMPVKPN 464
AE+F++ K N
Sbjct: 920 AERFLKECYKKKN 932
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 159/358 (44%), Gaps = 14/358 (3%)
Query: 81 FTLATKVFDCIPRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKA 140
F L K+ P V + N + G + A++ + +M RPN TY +L
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 141 CAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTD-- 198
G + + + ++++ + DV SA I + G EA K+ DE K D
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 199 VICWNAMIDGYLKCGEVEAANEVFVNMPDK----NVGSWNAMISGLARCGMIENARTLFD 254
++ ++++I+G+ ++ A ++F M K +V ++N +I G + +E +F
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420
Query: 255 EMGER----DEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVG 310
EM +R + ++++ +I G + A E+F +M + + P+ ++L G
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480
Query: 311 SLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR----EVSTWN 366
L++ + +++R+ ++ +I+ K G+++ W++F + ++ +V +N
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540
Query: 367 AMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMK 424
MI G G E+A LF +M + PN + ++ A G E L M+
Sbjct: 541 TMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 119/512 (23%), Positives = 219/512 (42%), Gaps = 53/512 (10%)
Query: 27 LSQKTVLDILNKKCFHSLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATK 86
S KT D K + L LK A+ L G ++K P+ F+ K
Sbjct: 40 FSGKTSYDYREKLSRNGLSELKLDDAVAL----------FGEMVKSRPFPSIIEFS---K 86
Query: 87 VFDCIPRPNVFVCNIYLKGSIEN-GEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTG 145
+ I + N F I L ++N G PH N +TY L
Sbjct: 87 LLSAIAKMNKFDVVISLGEQMQNLGIPH----------------NHYTYSILINCFCRRS 130
Query: 146 SVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKT--QTDVICWN 203
+ + ++K G ++ S+ + Y EA ++D+ T Q + + +N
Sbjct: 131 QLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFN 190
Query: 204 AMIDGYLKCGEVEAANEVFVNMPDK----NVGSWNAMISGLARCGMIENARTLFDEMG-- 257
+I G + A + M K ++ ++ +++GL + G + A L ++M
Sbjct: 191 TLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQG 250
Query: 258 --ERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSL-DQ 314
E + ++ IIDG K + +AL +F +M+ + I+P+ S+++ N G D
Sbjct: 251 KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDA 310
Query: 315 GRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVS----TWNAMIG 370
R + +ER I D +ALID +VK G+L A +++++M R + T++++I
Sbjct: 311 SRLLSDMIERK-INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 369
Query: 371 GLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIE 430
G +H R ++A ++F M + P+ VT+ ++ VE G+ +F M + +
Sbjct: 370 GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 429
Query: 431 PEMEHFGCVVDLLGRAGLVEEAEKFIESM---PVKPNVAVWGALLNACRIHGNVELGERV 487
+ + ++ L +AG + A++ + M V PN+ + LL+ +G +E V
Sbjct: 430 NTVT-YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVV 488
Query: 488 GWILL--DMEPRNSGRYALLSNIYAKAGRWDD 517
L MEP Y ++ KAG+ +D
Sbjct: 489 FEYLQRSKMEP-TIYTYNIMIEGMCKAGKVED 519
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/384 (20%), Positives = 175/384 (45%), Gaps = 21/384 (5%)
Query: 93 RPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQ 152
+P++ + + G + G+ A + +KM P Y T+ + + +
Sbjct: 218 QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALN 277
Query: 153 FHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDE--SGKTQTDVICWNAMIDGYL 210
+ +G+ +V S+ I ++G + +A ++L + K DV ++A+ID ++
Sbjct: 278 LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFV 337
Query: 211 KCGEVEAANEVFVNMP----DKNVGSWNAMISGLARCGMIENARTLFDEMGER----DEI 262
K G++ A +++ M D ++ +++++I+G ++ A+ +F+ M + D +
Sbjct: 338 KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV 397
Query: 263 SWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFV 322
+++ +I G+ K + +E +EVF +M + + + ++ G D + I +
Sbjct: 398 TYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM 457
Query: 323 ERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVRE----VSTWNAMIGGLAIHGRA 378
+ + + + L+D K G+L+ A VFE ++ + + T+N MI G+ G+
Sbjct: 458 VSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 517
Query: 379 EDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGC 438
ED LF ++ + KP+ V + +++ G E LF MK + + + GC
Sbjct: 518 EDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE----DGTLPNSGC 573
Query: 439 VVDLLG---RAGLVEEAEKFIESM 459
L+ R G E + + I+ M
Sbjct: 574 YNTLIRARLRDGDREASAELIKEM 597
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 154/344 (44%), Gaps = 14/344 (4%)
Query: 95 NVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFH 154
+V + N + G + A++ + +M RP+ FTY +L G + +
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 316
Query: 155 AFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGK--TQTDVICWNAMIDGYLKC 212
+ ++++ + +V SA I + G EA K+ DE K D+ ++++I+G+
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 213 GEVEAANEVFVNMPDK----NVGSWNAMISGLARCGMIENARTLFDEMGER----DEISW 264
++ A +F M K NV +++ +I G + +E LF EM +R + +++
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436
Query: 265 SAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVER 324
+ +I G+ + R A VF QM + P+ +L G L + + +++R
Sbjct: 437 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 496
Query: 325 NSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVS----TWNAMIGGLAIHGRAED 380
++++ D +I+ K G+++ WE+F + ++ VS +N MI G G E+
Sbjct: 497 STMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEE 556
Query: 381 AMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMK 424
A L KM + PN T+ ++ A G E L M+
Sbjct: 557 ADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMR 600
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/489 (21%), Positives = 206/489 (42%), Gaps = 56/489 (11%)
Query: 61 HDHFVSGTLLKCYANPNFNNFTLAT--KVFDCIPRPNVFVCNIYLKGSIENGEPHKAISC 118
HD + + C+ + + LA K+ P++ + L G + A++
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175
Query: 119 YHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYAS 178
+M+ + +P+ FT+ TL + E V +V++G D+ +
Sbjct: 176 VDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK 235
Query: 179 FGLFREARKMLD--ESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDK----NVGS 232
G A +L E GK + DV+ +N +IDG K ++ A +F M +K +V +
Sbjct: 236 RGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFT 295
Query: 233 WNAMISGLARCGMIENARTLFDEMGER----DEISWSAIIDGYIKQRCFKEALEVFHQMQ 288
++++IS L G +A L +M ER + +++SA+ID ++K+ EA +++ +M
Sbjct: 296 YSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 355
Query: 289 REKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLD 348
+ I P D ++LI+ + RLD
Sbjct: 356 KRSIDP-----------------------------------DIFTYSSLINGFCMHDRLD 380
Query: 349 MAWEVFEKMKVRE----VSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVL 404
A +FE M ++ V T++ +I G R E+ M+LF +M+ N VT+ ++
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Query: 405 NACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAE---KFIESMPV 461
+ A + +F M V + P + + ++D L + G + +A ++++ +
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSV-GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 499
Query: 462 KPNVAVWGALLNACRIHGNVELG-ERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVAR 520
+P++ + ++ G VE G E + L N Y + + + + G ++
Sbjct: 500 EPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADS 559
Query: 521 VRKLMKERG 529
+ K MKE G
Sbjct: 560 LLKKMKEDG 568
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/448 (23%), Positives = 197/448 (43%), Gaps = 27/448 (6%)
Query: 92 PRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGV 151
P P++ N L + + IS +M L + +TY + +
Sbjct: 79 PFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLAL 138
Query: 152 QFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKT--QTDVICWNAMIDGY 209
A ++K G D+ S+ + Y +A ++D+ + + D + +I G
Sbjct: 139 AVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL 198
Query: 210 L---KCGEVEAANEVFVN---MPDKNVGSWNAMISGLARCGMIENARTLFDEMG----ER 259
K E A + V PD + ++ +++GL + G I+ A +L +M E
Sbjct: 199 FLHNKASEAVALVDQMVQRGCQPD--LVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 256
Query: 260 DEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSL-DQGRWI 318
D + ++ IIDG K + +AL +F +M + I+P S+++ N G D R +
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 316
Query: 319 HSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVS----TWNAMIGGLAI 374
+ER I + V +ALID +VK G+L A +++++M R + T++++I G +
Sbjct: 317 SDMIERK-INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 375
Query: 375 HGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEME 434
H R ++A +F M + PN VT+ ++ A VE G+ LF M + + +
Sbjct: 376 HDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 435
Query: 435 HFGCVVDLLGRAGLVEEAE---KFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWIL 491
+ ++ +A + A+ K + S+ V PN+ + LL+ +G + V L
Sbjct: 436 -YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 494
Query: 492 L--DMEPRNSGRYALLSNIYAKAGRWDD 517
MEP + Y ++ KAG+ +D
Sbjct: 495 QRSTMEP-DIYTYNIMIEGMCKAGKVED 521
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 99/212 (46%), Gaps = 10/212 (4%)
Query: 94 PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQF 153
P++F + + G + +A + M+ + PN TY TL K V+EG++
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMEL 420
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDE--SGKTQTDVICWNAMIDGYLK 211
+ ++GL G+ + I + A+ + + S +++ +N ++DG K
Sbjct: 421 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 480
Query: 212 CGEVEAANEVFVNMP----DKNVGSWNAMISGLARCGMIENARTLFDEMGER----DEIS 263
G++ A VF + + ++ ++N MI G+ + G +E+ LF + + + I+
Sbjct: 481 NGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIA 540
Query: 264 WSAIIDGYIKQRCFKEALEVFHQMQREKIKPS 295
++ +I G+ ++ +EA + +M+ + P+
Sbjct: 541 YNTMISGFCRKGSKEEADSLLKKMKEDGPLPN 572
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 163/368 (44%), Gaps = 20/368 (5%)
Query: 93 RPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQ 152
+P++ + G + GEP A++ +KM + Y T+ + +
Sbjct: 212 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFD 271
Query: 153 FHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDE--SGKTQTDVICWNAMIDGYL 210
+ +G+ DV + I ++G + +A ++L + D++ +NA+ID ++
Sbjct: 272 LFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFV 331
Query: 211 KCGEVEAANEVFVNM-------PDKNVGSWNAMISGLARCGMIENARTLFDEMGER---- 259
K G++ A +++ M PD V ++N +I G + +E +F EM +R
Sbjct: 332 KEGKLVEAEKLYDEMVKSKHCFPD--VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 389
Query: 260 DEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIH 319
+ ++++ +I G+ + R A VF QM + + P +L N G+++ +
Sbjct: 390 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVF 449
Query: 320 SFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR----EVSTWNAMIGGLAIH 375
++++ +++D V T +I+ K G+++ W++F + ++ V T+ M+ G
Sbjct: 450 EYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 509
Query: 376 GRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEH 435
G E+A LF +M + PN T+ ++ A G L M R +
Sbjct: 510 GLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM-RSCGFAGDAST 568
Query: 436 FGCVVDLL 443
FG V ++L
Sbjct: 569 FGLVTNML 576
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 171/406 (42%), Gaps = 50/406 (12%)
Query: 95 NVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFH 154
N++ +I++ + A++ KMM L P+ T +L + E V
Sbjct: 109 NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 168
Query: 155 AFVVKQGLTGDVHIKSAGIQMYASFGLFR-----EARKMLDE--SGKTQTDVICWNAMID 207
+V+ G D + + GLF+ EA +++ Q D++ + A+I+
Sbjct: 169 DQMVEMGYQPDTVTFTTLVH-----GLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 223
Query: 208 GYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAI 267
G K GE PD + N M G E D + ++ I
Sbjct: 224 GLCKRGE-----------PDLALNLLNKMEKGKI----------------EADVVIYNTI 256
Query: 268 IDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSL-DQGRWIHSFVERNS 326
IDG K + +A ++F++M+ + IKP +++ N G D R + +E+N
Sbjct: 257 IDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN- 315
Query: 327 IQVDAVLGTALIDMYVKCGRLDMAWEVFEKMK-----VREVSTWNAMIGGLAIHGRAEDA 381
I D V ALID +VK G+L A +++++M +V +N +I G + R E+
Sbjct: 316 INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEG 375
Query: 382 MKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVD 441
M++F +M+ N VT+ +++ A + +F M + P++ + ++D
Sbjct: 376 MEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS-DGVHPDIMTYNILLD 434
Query: 442 LLGRAGLVEEAEKFIESM---PVKPNVAVWGALLNACRIHGNVELG 484
L G VE A E M +K ++ + ++ A G VE G
Sbjct: 435 GLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG 480
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 189/423 (44%), Gaps = 23/423 (5%)
Query: 115 AISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQ 174
IS KM +L N +TY + + + ++K G + ++ +
Sbjct: 84 VISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLN 143
Query: 175 MYASFGLFREARKMLDESGKT--QTDVICWNAMIDGYLKCGEVEAANEVFVNMPDK---- 228
+ EA ++D+ + Q D + + ++ G + + A + M K
Sbjct: 144 GFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQP 203
Query: 229 NVGSWNAMISGLARCGMIENARTLFDEMG----ERDEISWSAIIDGYIKQRCFKEALEVF 284
++ ++ A+I+GL + G + A L ++M E D + +S +ID K R +AL +F
Sbjct: 204 DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLF 263
Query: 285 HQMQREKIKPSRHLLPSMLTVCANVGSL-DQGRWIHSFVERNSIQVDAVLGTALIDMYVK 343
+M + I+P S+++ N G D R + +ER I + V +LID + K
Sbjct: 264 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK-INPNVVTFNSLIDAFAK 322
Query: 344 CGRLDMAWEVFEKMKVREVS----TWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVT 399
G+L A ++F++M R + T+N++I G +H R ++A ++FT M + P+ VT
Sbjct: 323 EGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVT 382
Query: 400 FVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESM 459
+ ++N A V G+ LF M R + + + ++ +A + A+ + M
Sbjct: 383 YNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVT-YTTLIHGFFQASDCDNAQMVFKQM 441
Query: 460 ---PVKPNVAVWGALLNACRIHGNVELGERVGWILL--DMEPRNSGRYALLSNIYAKAGR 514
V PN+ + LL+ +G +E V L MEP + Y ++S KAG+
Sbjct: 442 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP-DIYTYNIMSEGMCKAGK 500
Query: 515 WDD 517
+D
Sbjct: 501 VED 503
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 160/346 (46%), Gaps = 14/346 (4%)
Query: 93 RPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQ 152
+P++ + G + GEP A++ +KM + Y T+ + V + +
Sbjct: 202 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALN 261
Query: 153 FHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDE--SGKTQTDVICWNAMIDGYL 210
+ +G+ DV S+ I ++G + +A ++L + K +V+ +N++ID +
Sbjct: 262 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFA 321
Query: 211 KCGEVEAANEVFVNM----PDKNVGSWNAMISGLARCGMIENARTLFDEMGER----DEI 262
K G++ A ++F M D N+ ++N++I+G ++ A+ +F M + D +
Sbjct: 322 KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVV 381
Query: 263 SWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFV 322
+++ +I+G+ K + + +E+F M R + + +++ D + + +
Sbjct: 382 TYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM 441
Query: 323 ERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR----EVSTWNAMIGGLAIHGRA 378
+ + + + L+D K G+L+ A VFE ++ ++ T+N M G+ G+
Sbjct: 442 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKV 501
Query: 379 EDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMK 424
ED LF ++ + KP+ + + +++ G+ E LF MK
Sbjct: 502 EDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMK 547
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 157/343 (45%), Gaps = 15/343 (4%)
Query: 115 AISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQ 174
A++ + +M RP+ FTY +L G + + + ++++ + +V ++ I
Sbjct: 259 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLID 318
Query: 175 MYASFGLFREARKMLDESGKTQTD--VICWNAMIDGYLKCGEVEAANEVFVNMPDKN--- 229
+A G EA K+ DE + D ++ +N++I+G+ ++ A ++F M K+
Sbjct: 319 AFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP 378
Query: 230 -VGSWNAMISGLARCGMIENARTLFDEMGER----DEISWSAIIDGYIKQRCFKEALEVF 284
V ++N +I+G + + + LF +M R + ++++ +I G+ + A VF
Sbjct: 379 DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVF 438
Query: 285 HQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKC 344
QM + + P+ ++L G L++ + +++++ ++ D + + K
Sbjct: 439 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKA 498
Query: 345 GRLDMAWEVFEKMKVR----EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTF 400
G+++ W++F + ++ +V +N MI G G E+A LF KM + P+ T+
Sbjct: 499 GKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTY 558
Query: 401 VGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLL 443
++ A G L M R + +G V D+L
Sbjct: 559 NTLIRAHLRDGDKAASAELIKEM-RSCRFAGDASTYGLVTDML 600
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 156/340 (45%), Gaps = 14/340 (4%)
Query: 100 NIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVK 159
+I + G ++G A + +++M + N TY L G +G + ++K
Sbjct: 267 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK 326
Query: 160 QGLTGDVHIKSAGIQMYASFGLFREARKMLDE--SGKTQTDVICWNAMIDGYLKCGEVEA 217
+ + +V S I + G REA ++ E D I + ++IDG+ K ++
Sbjct: 327 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 386
Query: 218 ANEVFVNMP----DKNVGSWNAMISGLARCGMIENARTLFDEMGER----DEISWSAIID 269
AN++ M D N+ ++N +I+G + I++ LF +M R D ++++ +I
Sbjct: 387 ANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQ 446
Query: 270 GYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQV 329
G+ + A E+F +M K+ P+ +L + G ++ I +E++ +++
Sbjct: 447 GFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMEL 506
Query: 330 DAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVS----TWNAMIGGLAIHGRAEDAMKLF 385
D + +I ++D AW++F + ++ V T+N MIGGL G +A LF
Sbjct: 507 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLF 566
Query: 386 TKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKR 425
KM + P+G T+ ++ A G + + L +KR
Sbjct: 567 RKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKR 606
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 171/382 (44%), Gaps = 17/382 (4%)
Query: 93 RPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQ 152
+P++ N + G +G+ +A+ KM+ +PN TY + +G ++
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 153 FHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDE---SGKTQTDVICWNAMIDGY 209
+ ++ + D S I G A + +E G T T++I +N +I G+
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGIT-TNIITYNILIGGF 308
Query: 210 LKCGEVEAANEVFVNMPDK----NVGSWNAMISGLARCGMIENARTLFDEMGER----DE 261
G + ++ +M + NV +++ +I + G + A L EM R D
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368
Query: 262 ISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSF 321
I+++++IDG+ K+ +A ++ M + P+ ++ +D G +
Sbjct: 369 ITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 428
Query: 322 VERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVS----TWNAMIGGLAIHGR 377
+ + D V LI + + G+L++A E+F++M R+V T+ ++ GL +G
Sbjct: 429 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 488
Query: 378 AEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFG 437
+E A+++F K+ K + + + +++ +A V+ LF S+ + ++P ++ +
Sbjct: 489 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP-LKGVKPGVKTYN 547
Query: 438 CVVDLLGRAGLVEEAEKFIESM 459
++ L + G + EAE M
Sbjct: 548 IMIGGLCKKGPLSEAELLFRKM 569
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 160/382 (41%), Gaps = 47/382 (12%)
Query: 115 AISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQ 174
A S K++ L PN T+ TL + G V E ++ +V+ G D+ + +
Sbjct: 142 AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVN 201
Query: 175 MYASFGLFREARKMLDESGK--TQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVG- 231
G EA ++D+ + Q + + + +++ K G+ A E+ M ++N+
Sbjct: 202 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 232 ---SWNAMISGLARCGMIENARTLFDEMGER----DEISWSAIIDGYIKQRCFKEALEVF 284
++ +I GL + G ++NA LF+EM + + I+++ +I G+ + + ++
Sbjct: 262 DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 321
Query: 285 HQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKC 344
M + KI P+ ++ G L + +H + I D + T+LID + K
Sbjct: 322 RDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE 381
Query: 345 GRLDMAWEVFEKMKVR----EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTF 400
LD A ++ + M + + T+N +I G R +D ++LF KM+ + VT+
Sbjct: 382 NHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 441
Query: 401 VGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMP 460
++ G E LG+ + +E + + S
Sbjct: 442 NTLIQ-----GFCE----------------------------LGKLNVAKELFQEMVSRK 468
Query: 461 VKPNVAVWGALLNACRIHGNVE 482
V PN+ + LL+ +G E
Sbjct: 469 VPPNIVTYKILLDGLCDNGESE 490
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 127/272 (46%), Gaps = 16/272 (5%)
Query: 227 DKNVGSWNAMISGLARCGMIENARTLFD---EMGER-DEISWSAIIDGYIKQRCFKEALE 282
+ N +++ +I+GL G + A L D EMG + D I+ + +++G EA+
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 214
Query: 283 VFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYV 342
+ +M +P+ +L V G + +E +I++DAV + +ID
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 343 KCGRLDMAWEVFEKMKVREVS----TWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGV 398
K G LD A+ +F +M+++ ++ T+N +IGG GR +D KL M K PN V
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334
Query: 399 TFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIES 458
TF ++++ G + L M I P+ + ++D + +++A + ++
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIH-RGIAPDTITYTSLIDGFCKENHLDKANQMVDL 393
Query: 459 MPVK---PNVAVWGALLN----ACRIHGNVEL 483
M K PN+ + L+N A RI +EL
Sbjct: 394 MVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 129/293 (44%), Gaps = 17/293 (5%)
Query: 279 EALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALI 338
+A+++F M + P+ + + A D + +E I + + +I
Sbjct: 71 DAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMI 130
Query: 339 DMYVKCGRLDMAWEVFEKM----KVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRK 394
+ + +C +L +A+ K+ T++ +I GL + GR +A++L +M K
Sbjct: 131 NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK 190
Query: 395 PNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLL---GRAGLVEE 451
P+ +T ++N +G + L + M Y +P +G V++++ G+ L E
Sbjct: 191 PDLITINTLVNGLCLSGKEAEAMLLIDKMVE-YGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 452 AEKFIESMPVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPR----NSGRYALLSN 507
+ +E +K + + +++ HG++ + + +ME + N Y +L
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSL---DNAFNLFNEMEMKGITTNIITYNILIG 306
Query: 508 IYAKAGRWDDVARVRKLMKERGI--ETVPGSSMMDMGGKVHEFKMGDSSHPQM 558
+ AGRWDD A++ + M +R I V S ++D K + + + H +M
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 359
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/438 (20%), Positives = 186/438 (42%), Gaps = 30/438 (6%)
Query: 61 HDHFVSGTLLKCYANPNFNNFTLAT--KVFDCIPRPNVFVCNIYLKGSIENGEPHKAISC 118
H+ + ++ C+ F + KV P+ N +KG G+ +A+
Sbjct: 121 HNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVL 180
Query: 119 YHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQ---- 174
+M+ +P+ TY ++ +G + + ++ + DV S I
Sbjct: 181 VDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR 240
Query: 175 ---MYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDK--- 228
+ A+ LF+E E+ ++ V+ +N+++ G K G+ + +M +
Sbjct: 241 DGCIDAAISLFKEM-----ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295
Query: 229 -NVGSWNAMISGLARCGMIENARTLFDEMGER----DEISWSAIIDGYIKQRCFKEALEV 283
NV ++N ++ + G ++ A L+ EM R + I+++ ++DGY Q EA +
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355
Query: 284 FHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVK 343
M R K P S++ V +D G + + + + +AV + L+ + +
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415
Query: 344 CGRLDMAWEVFEKM----KVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVT 399
G++ +A E+F++M + +V T+ ++ GL +G+ E A+++F + K V
Sbjct: 416 SGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM 475
Query: 400 FVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESM 459
+ ++ G VE LF S+ ++P + + ++ L + G + EA + M
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLP-CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534
Query: 460 PVK---PNVAVWGALLNA 474
PN + L+ A
Sbjct: 535 EEDGNAPNDCTYNTLIRA 552
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 176/397 (44%), Gaps = 18/397 (4%)
Query: 103 LKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGL 162
L+ I + + AI+ + +M+ P+ + F A A T + F + G+
Sbjct: 60 LRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGI 119
Query: 163 TGDVHIKSAGIQMYASFGLFREARKMLDESGKT--QTDVICWNAMIDGYLKCGEVEAA-- 218
+++ + I + A +L + K + D +N +I G G+V A
Sbjct: 120 AHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVV 179
Query: 219 --NEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGER----DEISWSAIIDGYI 272
+ + N +V ++N++++G+ R G A L +M ER D ++S IID
Sbjct: 180 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 239
Query: 273 KQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAV 332
+ C A+ +F +M+ + IK S S++ G + G + + I + +
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVI 299
Query: 333 LGTALIDMYVKCGRLDMAWEVFEKMKVREVS----TWNAMIGGLAIHGRAEDAMKLFTKM 388
L+D++VK G+L A E++++M R +S T+N ++ G + R +A + M
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359
Query: 389 NGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGL 448
K P+ VTF ++ V+ G+ +F ++ + + + + +V ++G
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV-TYSILVQGFCQSGK 418
Query: 449 VEEAEKFIESMP---VKPNVAVWGALLNACRIHGNVE 482
++ AE+ + M V P+V +G LL+ +G +E
Sbjct: 419 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 127/345 (36%), Gaps = 84/345 (24%)
Query: 94 PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQF 153
PNV N+ L ++ G+ +A Y +M+ PN TY TL
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDG------------- 342
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLD--ESGKTQTDVICWNAMIDGYLK 211
Y EA MLD K D++ + ++I GY
Sbjct: 343 ----------------------YCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCM 380
Query: 212 CGEVEAANEVFVNMPDK----NVGSWNAMISGLARCGMIENARTLFDEMGER----DEIS 263
V+ +VF N+ + N +++ ++ G + G I+ A LF EM D ++
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440
Query: 264 WSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVE 323
+ ++DG ++ALE+F +Q+ K +D G
Sbjct: 441 YGILLDGLCDNGKLEKALEIFEDLQKSK--------------------MDLG-------- 472
Query: 324 RNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR----EVSTWNAMIGGLAIHGRAE 379
V+ T +I+ K G+++ AW +F + + V T+ MI GL G
Sbjct: 473 -------IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLS 525
Query: 380 DAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMK 424
+A L KM + PN T+ ++ A G + L MK
Sbjct: 526 EANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 172/394 (43%), Gaps = 34/394 (8%)
Query: 108 ENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVH 167
++G +A + + ++ +P Y L K TG +K+ + + K+G++ D H
Sbjct: 316 DSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEH 375
Query: 168 IKSAGIQMYASFGLFREARKMLDE--SGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNM 225
S I Y + G + AR +L E +G Q + ++ ++ G+ GE + +V M
Sbjct: 376 TYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEM 435
Query: 226 ------PDKNVGSWNAMISGLARCGMIENARTLFDEMG----ERDEISWSAIIDGYIKQR 275
PD+ +N +I + +++A T FD M E D ++W+ +ID + K
Sbjct: 436 KSIGVKPDRQF--YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHG 493
Query: 276 CFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSL-DQGRW-----IHSFVERNSIQV 329
A E+F M+R R LP T + S DQ RW + ++ I
Sbjct: 494 RHIVAEEMFEAMER------RGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILP 547
Query: 330 DAVLGTALIDMYVKCGRLDMAWEVFEKMK---VREVST-WNAMIGGLAIHGRAEDAMKLF 385
+ V T L+D+Y K GR + A E E+MK ++ ST +NA+I A G +E A+ F
Sbjct: 548 NVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAF 607
Query: 386 TKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGR 445
M + KP+ + ++NA + MK ++P++ + ++ L R
Sbjct: 608 RVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKE-NGVKPDVVTYTTLMKALIR 666
Query: 446 AGLVEEAEKFIESMPV---KPNVAVWGALLNACR 476
++ E M + KP+ L +A R
Sbjct: 667 VDKFQKVPVVYEEMIMSGCKPDRKARSMLRSALR 700
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 171/411 (41%), Gaps = 29/411 (7%)
Query: 192 SGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGS----WNAMISGLARCGMIE 247
S K + +NA+I + ++E A + M S ++ +I L R I+
Sbjct: 190 SQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKID 249
Query: 248 NARTL--FDEMGERDEISWSA-----IIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLP 300
+ L + E+ ERD++ II G+ K +AL++ Q + L
Sbjct: 250 SVMLLRLYKEI-ERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLV 308
Query: 301 SMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR 360
S+++ A+ G + + + ++ I+ AL+ YVK G L A + +M+ R
Sbjct: 309 SIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKR 368
Query: 361 EVS----TWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERG 416
VS T++ +I GR E A + +M +PN F +L G ++
Sbjct: 369 GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKT 428
Query: 417 LGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESM---PVKPNVAVWGALLN 473
+ MK + ++P+ + + V+D G+ ++ A + M ++P+ W L++
Sbjct: 429 FQVLKEMKSI-GVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLID 487
Query: 474 ACRIHGNVELGERVGWILLDMEPRN----SGRYALLSNIYAKAGRWDDVARVRKLMKERG 529
HG + E + ME R + Y ++ N Y RWDD+ R+ MK +G
Sbjct: 488 CHCKHGRHIVAEE---MFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQG 544
Query: 530 I--ETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDKLQIEGYS 578
I V ++++D+ GK F +MK + L M I Y+
Sbjct: 545 ILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYA 595
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 162/353 (45%), Gaps = 29/353 (8%)
Query: 100 NIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVK 159
N +KG + G H+A+ + +M+ P+ TY +L + G++ ++F +
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373
Query: 160 QGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKT--QTDVICWNAMIDGYLKCGEVEA 217
+GL + + + ++ G EA ++L E V+ +NA+I+G+ G++E
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMED 433
Query: 218 ANEVFVNMPDK----NVGSWNAMISGLARCGMIENARTLFDEMGER----DEISWSAIID 269
A V +M +K +V S++ ++SG R ++ A + EM E+ D I++S++I
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQ 493
Query: 270 GYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQV 329
G+ +QR KEA +++ +M R + P +++ G L++ +H+ + +
Sbjct: 494 GFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLP 553
Query: 330 DAVLGTALIDMYVKCGR--------LDMAWE-----------VFEKMKVREVSTWNAMIG 370
D V + LI+ K R L + +E + E E + ++I
Sbjct: 554 DVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIK 613
Query: 371 GLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSM 423
G + G +A ++F M G+ KP+G + +++ AG + + L+ M
Sbjct: 614 GFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/465 (20%), Positives = 194/465 (41%), Gaps = 24/465 (5%)
Query: 43 SLQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIY 102
S+ HL QAH + ++ V ++ N +F + ++ + PNVF NI
Sbjct: 155 SIVHLAQAHGFMPGVLSYNA--VLDATIRSKRNISFAE-NVFKEMLESQVSPNVFTYNIL 211
Query: 103 LKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGL 162
++G G A++ + KM PN TY TL + +G + + +GL
Sbjct: 212 IRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGL 271
Query: 163 TGDVHIKSAGIQMYASFGLFREARKMLDESGKT--QTDVICWNAMIDGYLKCGEVEAA-- 218
++ + I G +E +L E + D + +N +I GY K G A
Sbjct: 272 EPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALV 331
Query: 219 --NEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMGER----DEISWSAIIDGYI 272
E+ + +V ++ ++I + + G + A D+M R +E +++ ++DG+
Sbjct: 332 MHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFS 391
Query: 273 KQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAV 332
++ EA V +M PS +++ G ++ + ++ + D V
Sbjct: 392 QKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVV 451
Query: 333 LGTALIDMYVKCGRLDMAW----EVFEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKM 388
+ ++ + + +D A E+ EK + T++++I G R ++A L+ +M
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 511
Query: 389 NGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGL 448
P+ T+ ++NA G +E+ L L N M + P++ + +++ L +
Sbjct: 512 LRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE-KGVLPDVVTYSVLINGLNKQSR 570
Query: 449 VEEAEKFIESMPVK---PNVAVWGALLNACRIHGNVELGERVGWI 490
EA++ + + + P+ + L+ C N+E V I
Sbjct: 571 TREAKRLLLKLFYEESVPSDVTYHTLIENC---SNIEFKSVVSLI 612
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 87/187 (46%), Gaps = 25/187 (13%)
Query: 93 RPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQ 152
+P+ + ++G E +A Y +M+ + P++FTY L A + G +++ +Q
Sbjct: 482 KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQ 541
Query: 153 FHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKML-----DESGKTQTDVI------- 200
H +V++G+ DV S I REA+++L +ES +DV
Sbjct: 542 LHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEES--VPSDVTYHTLIEN 599
Query: 201 CWN-------AMIDGYLKCGEVEAANEVFVNMPDKN----VGSWNAMISGLARCGMIENA 249
C N ++I G+ G + A++VF +M KN ++N MI G R G I A
Sbjct: 600 CSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKA 659
Query: 250 RTLFDEM 256
TL+ EM
Sbjct: 660 YTLYKEM 666
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/335 (19%), Positives = 134/335 (40%), Gaps = 29/335 (8%)
Query: 94 PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQF 153
P+V N + G G+ AI+ M P+ +Y T+ + V E ++
Sbjct: 413 PSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRV 472
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKT--QTDVICWNAMIDGYLK 211
+V++G+ D S+ IQ + +EA + +E + D + A+I+ Y
Sbjct: 473 KREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCM 532
Query: 212 CGEVEAANEVFVNMPDK----NVGSWNAMISGLARCGMIENAR----TLFDEMGERDEIS 263
G++E A ++ M +K +V +++ +I+GL + A+ LF E +++
Sbjct: 533 EGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVT 592
Query: 264 WSAIID-----------GYIKQRCFK----EALEVFHQMQREKIKPSRHLLPSMLTVCAN 308
+ +I+ IK C K EA +VF M + KP M+
Sbjct: 593 YHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCR 652
Query: 309 VGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLD----MAWEVFEKMKVREVST 364
G + + ++ + ++ + V AL+ K G+++ + V ++ E
Sbjct: 653 AGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQ 712
Query: 365 WNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVT 399
++ G + + + +M + PNG++
Sbjct: 713 AKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 165/346 (47%), Gaps = 14/346 (4%)
Query: 93 RPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQ 152
+P++ I + G + G+ A+S KM P Y T+ A +V + +
Sbjct: 218 QPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALN 277
Query: 153 FHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDE--SGKTQTDVICWNAMIDGYL 210
+ +G+ +V ++ I+ ++G + +A ++L + K +V+ ++A+ID ++
Sbjct: 278 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 337
Query: 211 KCGEVEAANEVFVNMP----DKNVGSWNAMISGLARCGMIENARTLFDEMGERD----EI 262
K G++ A +++ M D ++ +++++I+G ++ A+ +F+ M +D +
Sbjct: 338 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 397
Query: 263 SWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFV 322
+++ +I G+ K + E +E+F +M + + + +++ D + + +
Sbjct: 398 TYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQM 457
Query: 323 ERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR----EVSTWNAMIGGLAIHGRA 378
+ + D + + L+D G+++ A VFE ++ ++ T+N MI G+ G+
Sbjct: 458 VSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKV 517
Query: 379 EDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMK 424
ED LF ++ + KPN VT+ +++ G+ E LF MK
Sbjct: 518 EDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMK 563
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 98/446 (21%), Positives = 193/446 (43%), Gaps = 23/446 (5%)
Query: 92 PRPNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGV 151
P P++ + L + + IS +M L N +TY L + +
Sbjct: 77 PFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLAL 136
Query: 152 QFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKT--QTDVICWNAMIDGY 209
A ++K G D+ ++ + + +A ++ + + Q D +N +I G
Sbjct: 137 AVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGL 196
Query: 210 LKCGEVEAA----NEVFVNMPDKNVGSWNAMISGLARCGMIENARTLFDEMG----ERDE 261
+ A + + V ++ ++ +++GL + G I+ A +L +M E
Sbjct: 197 FRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGV 256
Query: 262 ISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSL-DQGRWIHS 320
+ ++ IID + +AL +F +M + I+P+ S++ N G D R +
Sbjct: 257 VIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 316
Query: 321 FVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVS----TWNAMIGGLAIHG 376
+ER I + V +ALID +VK G+L A +++++M R + T++++I G +H
Sbjct: 317 MIER-KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 377 RAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHF 436
R ++A +F M + PN VT+ ++ A V+ G+ LF M + + + +
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT-Y 434
Query: 437 GCVVDLLGRAGLVEEAEKFIESM---PVKPNVAVWGALLNACRIHGNVELGERVGWILL- 492
++ +A + A+ + M V P++ + LL+ +G VE V L
Sbjct: 435 TTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR 494
Query: 493 -DMEPRNSGRYALLSNIYAKAGRWDD 517
MEP + Y ++ KAG+ +D
Sbjct: 495 SKMEP-DIYTYNIMIEGMCKAGKVED 519
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 144/320 (45%), Gaps = 25/320 (7%)
Query: 229 NVGSWNAMISGLARCGMIENARTLFDEMG----ERDEISWSAIIDGYIKQRCFKEALEVF 284
N+ +++ +I+ R + A + +M E D ++ +++++G+ +A+ +
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 285 HQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHS--FVERNSI---QVDAVLGTALID 339
QM +P +++ G R + V+R + Q D V +++
Sbjct: 175 GQMVEMGYQPDSFTFNTLIH-----GLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVN 229
Query: 340 MYVKCGRLDMAWEVFEKMKVREVS----TWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKP 395
K G +D+A + +KM+ ++ +N +I L + DA+ LFT+M+ + +P
Sbjct: 230 GLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRP 289
Query: 396 NGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKF 455
N VT+ ++ + G L + M +I P + F ++D + G + EAEK
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIE-RKINPNVVTFSALIDAFVKEGKLVEAEKL 348
Query: 456 IESM---PVKPNVAVWGALLNACRIHGNVELGERVGWILL--DMEPRNSGRYALLSNIYA 510
+ M + P++ + +L+N +H ++ + + +++ D P N Y L +
Sbjct: 349 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP-NVVTYNTLIKGFC 407
Query: 511 KAGRWDDVARVRKLMKERGI 530
KA R D+ + + M +RG+
Sbjct: 408 KAKRVDEGMELFREMSQRGL 427
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/253 (18%), Positives = 113/253 (44%), Gaps = 20/253 (7%)
Query: 68 TLLKCYANPNFNNFTLATKVF-DCIPR---PNVFVCNIYLKGSIENGEPHKAISCYHKMM 123
+L++C N + ++ A+++ D I R PNV + + ++ G+ +A Y +M+
Sbjct: 296 SLIRCLCN--YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 353
Query: 124 VLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFR 183
+ P+ FTY +L + + E ++ + +V + I+ +
Sbjct: 354 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVD 413
Query: 184 EARKMLDESGKTQT--DVICWNAMIDGYLKCGEVEAANEVFVNM------PDKNVGSWNA 235
E ++ E + + + + +I G+ + E + A VF M PD + +++
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPD--IMTYSI 471
Query: 236 MISGLARCGMIENARTLFDEMG----ERDEISWSAIIDGYIKQRCFKEALEVFHQMQREK 291
++ GL G +E A +F+ + E D +++ +I+G K ++ ++F + +
Sbjct: 472 LLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 531
Query: 292 IKPSRHLLPSMLT 304
+KP+ +M++
Sbjct: 532 VKPNVVTYTTMMS 544
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/440 (20%), Positives = 186/440 (42%), Gaps = 51/440 (11%)
Query: 40 CFHSLQHLKQAHAI---ILKTAHFHDHFVSGTLLK--CYANPNFNNFTLATKVFDCIPRP 94
CF + L A + I+K + D + TLL C L ++ + +P
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 95 NVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFH 154
+ N + G NG+ A+ +M+ +PN+ TY + +G ++
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMEL- 250
Query: 155 AFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGE 214
RKM E + D + ++ +IDG K G
Sbjct: 251 ------------------------------LRKM--EERNIKLDAVKYSIIIDGLCKDGS 278
Query: 215 VEAANEVFVNMPDK----NVGSWNAMISGLARCGMIENARTLFDEMGER----DEISWSA 266
++ A +F M K ++ ++N +I G G ++ L +M +R + +++S
Sbjct: 279 LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV 338
Query: 267 IIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNS 326
+ID ++K+ +EA ++ +M + I P+ S++ L++ + +
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 327 IQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREV----STWNAMIGGLAIHGRAEDAM 382
D + LI+ Y K R+D E+F +M +R V T+N ++ G G+ E A
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458
Query: 383 KLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDL 442
KLF +M + +P+ V++ +L+ G +E+ L +F +++ ++E ++ + ++
Sbjct: 459 KLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEK-SKMELDIGIYMIIIHG 517
Query: 443 LGRAGLVEEAEKFIESMPVK 462
+ A V++A S+P+K
Sbjct: 518 MCNASKVDDAWDLFCSLPLK 537
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 161/353 (45%), Gaps = 21/353 (5%)
Query: 184 EARKMLD---ESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDK----NVGSWNAM 236
EA +++D E G T +I N +++G G+V A + M + N ++ +
Sbjct: 176 EALELVDRMVEMGHKPT-LITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPV 234
Query: 237 ISGLARCGMIENARTLFDEMGER----DEISWSAIIDGYIKQRCFKEALEVFHQMQREKI 292
++ + + G A L +M ER D + +S IIDG K A +F++M+ +
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 294
Query: 293 KPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWE 352
K +++ N G D G + + + I + V + LID +VK G+L A +
Sbjct: 295 KADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQ 354
Query: 353 VFEKMKVREVS----TWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACA 408
+ ++M R ++ T+N++I G R E+A+++ M + P+ +TF ++N
Sbjct: 355 LLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYC 414
Query: 409 HAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESM---PVKPNV 465
A ++ GL LF M + + + +V ++G +E A+K + M V+P++
Sbjct: 415 KANRIDDGLELFREMS-LRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDI 473
Query: 466 AVWGALLNACRIHGNVELG-ERVGWILLDMEPRNSGRYALLSNIYAKAGRWDD 517
+ LL+ +G +E E G I + G Y ++ + A + DD
Sbjct: 474 VSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDD 526
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/442 (21%), Positives = 190/442 (42%), Gaps = 42/442 (9%)
Query: 121 KMMV--LNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLT--GDVHIKS------ 170
+MM+ L+S+ ++F P L + + ++ F ++G + D ++
Sbjct: 3 RMMIRRLSSQASRFVQPRLLETGTLRIALINCPNELLFCCERGFSTFSDRNLSYRDKLSS 62
Query: 171 --AGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDK 228
GI+ + LFR+ + + VI +N + K + E + M K
Sbjct: 63 GLVGIKADDAVDLFRDMIQ-----SRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESK 117
Query: 229 NVG----SWNAMISGLARCGMIENARTLFDEMG-------ERDEISWSAIIDGYIKQRCF 277
+ + + MI+ RC + A F MG E D + ++ +++G +
Sbjct: 118 GIAHSIYTLSIMINCFCRCRKLSYA---FSTMGKIMKLGYEPDTVIFNTLLNGLCLECRV 174
Query: 278 KEALEVFHQMQREKIKPSRHLLPSMLT-VCANVGSLDQGRWIHSFVERNSIQVDAVLGTA 336
EALE+ +M KP+ L +++ +C N D I VE Q + V
Sbjct: 175 SEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVE-TGFQPNEVTYGP 233
Query: 337 LIDMYVKCGRLDMAWEVFEKMKVREVS----TWNAMIGGLAIHGRAEDAMKLFTKMNGEK 392
++++ K G+ +A E+ KM+ R + ++ +I GL G ++A LF +M +
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 393 RKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEA 452
K + +T+ ++ +AG + G L M + +I P + F ++D + G + EA
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK-RKISPNVVTFSVLIDSFVKEGKLREA 352
Query: 453 EKFIESM---PVKPNVAVWGALLNA-CRIHGNVELGERVGWILLDMEPRNSGRYALLSNI 508
++ ++ M + PN + +L++ C+ + E + V ++ + + +L N
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILING 412
Query: 509 YAKAGRWDDVARVRKLMKERGI 530
Y KA R DD + + M RG+
Sbjct: 413 YCKANRIDDGLELFREMSLRGV 434
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/319 (20%), Positives = 123/319 (38%), Gaps = 80/319 (25%)
Query: 94 PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQF 153
PNV ++ + ++ G+ +A +MM PN TY +L ++E +Q
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVICWNAMIDGYLKCG 213
++ +G D++ +N +I+GY K
Sbjct: 391 VDLMISKG---------------------------------CDPDIMTFNILINGYCKAN 417
Query: 214 EVEAANEVFVNMPDK----NVGSWNAMISGLARCGMIENARTLFDEMGER----DEISWS 265
++ E+F M + N ++N ++ G + G +E A+ LF EM R D +S+
Sbjct: 418 RIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYK 477
Query: 266 AIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERN 325
++DG ++ALE+F ++++ K++ LD G ++
Sbjct: 478 ILLDGLCDNGELEKALEIFGKIEKSKME------------------LDIGIYM------- 512
Query: 326 SIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVS----TWNAMIGGLAIHGRAEDA 381
+I ++D AW++F + ++ V +N MI L A
Sbjct: 513 ----------IIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKA 562
Query: 382 MKLFTKMNGEKRKPNGVTF 400
LF KM E P+ +T+
Sbjct: 563 DILFRKMTEEGHAPDELTY 581
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 158/347 (45%), Gaps = 18/347 (5%)
Query: 129 PNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKM 188
PN+ TY L GS+KE Q + + + D+ + I + G RE ++
Sbjct: 273 PNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLEL 332
Query: 189 LD--ESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVGSWNAMISGLA----- 241
+D +S K Q DV+ +N +IDG + G A ++ M + V + N + ++
Sbjct: 333 MDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKA-NQVTHNISLKWLC 391
Query: 242 ----RCGMIENARTLFDEMG-ERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSR 296
R + + L D G D +++ +I Y+K ALE+ +M ++ IK +
Sbjct: 392 KEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNT 451
Query: 297 HLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEK 356
L ++L LD+ + + + VD V LI + + +++ A E++++
Sbjct: 452 ITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDE 511
Query: 357 MK----VREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGM 412
MK VST+N++IGGL HG+ E AM+ F ++ P+ TF ++ G
Sbjct: 512 MKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGR 571
Query: 413 VERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESM 459
VE+ +N + + +P+ +++ L + G+ E+A F ++
Sbjct: 572 VEKAFEFYNESIK-HSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL 617
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 137/626 (21%), Positives = 254/626 (40%), Gaps = 87/626 (13%)
Query: 44 LQHLKQAHAIILKTAHFHDHFVSGTLLKCYANPNFNNFTLATKVFDCIPRPNVFVCNIYL 103
L H K A A L ++ S +L +PN + P P+ + +I L
Sbjct: 89 LSHHKFADAKSLLVSYIRTSDASLSLCNSLLHPNLH----------LSPPPSKALFDIAL 138
Query: 104 KGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACA---VTGSVKEGVQFHAFVVKQ 160
+ G+PH A+ + KM+ L +PN T TL + S+ + +VK
Sbjct: 139 SAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKI 198
Query: 161 GLTGDVHIKSAGIQMYASFGLFREARKMLD---ESGKTQTDVICWNAMID---------- 207
G++ +V + + Y G +A ML+ K D + +N ++
Sbjct: 199 GVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSD 258
Query: 208 -------------------------GYLKCGEVEAANEVFVNMPDKNV----GSWNAMIS 238
GY K G ++ A ++ M NV ++N +I+
Sbjct: 259 LKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILIN 318
Query: 239 GLARCGMIENARTLFDEMG----ERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKP 294
GL G + L D M + D ++++ +IDG + EA ++ QM+ + +K
Sbjct: 319 GLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKA 378
Query: 295 SR--HLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWE 352
++ H + S+ +C R + V+ + D V LI Y+K G L A E
Sbjct: 379 NQVTHNI-SLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALE 437
Query: 353 VFEKMKVREVS----TWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACA 408
+ +M + + T N ++ L + ++A L + + VT+ ++
Sbjct: 438 MMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFF 497
Query: 409 HAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEA-EKFIE--SMPVKPNV 465
VE+ L +++ MK+V +I P + F ++ L G E A EKF E + P+
Sbjct: 498 REEKVEKALEMWDEMKKV-KITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDD 556
Query: 466 AVWGA-LLNACRIHGNVELGERV--GWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVR 522
+ + + +L C+ G VE I +P N LL+ + + +
Sbjct: 557 STFNSIILGYCK-EGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFN 615
Query: 523 KLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMMDK-LQIEGYSPNT 581
L++ER ++TV ++M+ K ++KE Y +L +M +K L+ + ++ N+
Sbjct: 616 TLIEEREVDTVTYNTMISAFCK----------DKKLKEAYDLLSEMEEKGLEPDRFTYNS 665
Query: 582 --SMVSYDIEEEEKETVLKQHSEKIA 605
S++ D + E + +LK+ S K
Sbjct: 666 FISLLMEDGKLSETDELLKKFSGKFG 691
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 129/262 (49%), Gaps = 19/262 (7%)
Query: 232 SWNAMISGLARCGMIENARTLFDEM----GERDEISWSAIIDGYIKQRCFKEALEVFHQM 287
++ M+ L R L DEM + + ++++ +I Y + KEA+ VF+QM
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420
Query: 288 QREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRL 347
Q +P R +++ + A G LD ++ ++ + D + +I+ K G L
Sbjct: 421 QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHL 480
Query: 348 DMAWEVFEKMK----VREVSTWNAMIGGLAIHGRA---EDAMKLFTKMNGEKRKPNGVTF 400
A +F +M + T+N MI A+H +A E A+KL+ M +P+ VT+
Sbjct: 481 PAAHRLFCEMVGQGCTPNLVTFNIMI---ALHAKARNYETALKLYRDMQNAGFQPDKVTY 537
Query: 401 VGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESM- 459
V+ H G +E G+F M+R + P+ +G +VDL G+AG V++A ++ ++M
Sbjct: 538 SIVMEVLGHCGFLEEAEGVFAEMQRKNWV-PDEPVYGLLVDLWGKAGNVDKAWQWYQAML 596
Query: 460 --PVKPNVAVWGALLNA-CRIH 478
++PNV +LL+ R+H
Sbjct: 597 QAGLRPNVPTCNSLLSTFLRVH 618
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 118/252 (46%), Gaps = 14/252 (5%)
Query: 173 IQMYASFGLFREARKMLDE--SGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNV 230
I Y +EA + ++ + D + + +ID + K G ++ A +++ M + +
Sbjct: 401 IHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGL 460
Query: 231 G----SWNAMISGLARCGMIENARTLFDEMGER----DEISWSAIIDGYIKQRCFKEALE 282
+++ +I+ L + G + A LF EM + + ++++ +I + K R ++ AL+
Sbjct: 461 SPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALK 520
Query: 283 VFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYV 342
++ MQ +P + ++ V + G L++ + + ++R + D + L+D++
Sbjct: 521 LYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWG 580
Query: 343 KCGRLDMAWEVFEKM---KVR-EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGV 398
K G +D AW+ ++ M +R V T N+++ R +A L M P+
Sbjct: 581 KAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQ 640
Query: 399 TFVGVLNACAHA 410
T+ +L+ C A
Sbjct: 641 TYTLLLSCCTDA 652
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/367 (19%), Positives = 163/367 (44%), Gaps = 45/367 (12%)
Query: 103 LKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGL 162
+ G + G+ A++ KM + +P+ Y + G + + ++++G+
Sbjct: 268 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 327
Query: 163 TGDVHIKSAGIQMYASFGLFREARKMLDE--SGKTQTDVICWNAMIDGYLKCGEVEAANE 220
+V + I + SFG + +A+++L + + DV+ +NA+I +K G++ A +
Sbjct: 328 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 387
Query: 221 VFVNMPDK----NVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRC 276
+ M + + ++N+MI G + ++A+ +FD M D ++++ IID Y + +
Sbjct: 388 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKR 447
Query: 277 FKEALEVFHQMQR--------------------EKIKPSRHLLPSMLT--VCANVGS--- 311
E +++ ++ R + + ++ L M++ VC + +
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507
Query: 312 ----------LDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR- 360
L++ + ++ + I +D V +I K ++D AW++F + +
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567
Query: 361 ---EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGL 417
+V T+N MI G DA LF KM +P+ T+ ++ C AG +++ +
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSI 627
Query: 418 GLFNSMK 424
L + M+
Sbjct: 628 ELISEMR 634
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/406 (20%), Positives = 170/406 (41%), Gaps = 22/406 (5%)
Query: 94 PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQF 153
P V N + G G +A + +KM+ + TY T+ G K +
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDE--SGKTQTDVICWNAMIDGYLK 211
+ + + + DV I SA I G +A+ + E +V +N MIDG+
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343
Query: 212 CGEVEAANEVFVNMPDK----NVGSWNAMISGLARCGMIENARTLFDEMGER----DEIS 263
G A + +M ++ +V ++NA+IS + G + A L DEM R D ++
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403
Query: 264 WSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVE 323
++++I G+ K F +A +F M P +++ V +D+G + +
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459
Query: 324 RNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVS----TWNAMIGGLAIHGRAE 379
R + + LI + + L+ A ++F++M V T N ++ G + + E
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 519
Query: 380 DAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCV 439
+A++LF + K + V + +++ V+ LF S+ ++ +EP+++ + +
Sbjct: 520 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLP-IHGVEPDVQTYNVM 578
Query: 440 VDLLGRAGLVEEAEKFIESMPV---KPNVAVWGALLNACRIHGNVE 482
+ + +A M +P+ + + L+ C G ++
Sbjct: 579 ISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEID 624
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 158/383 (41%), Gaps = 41/383 (10%)
Query: 78 FNNFTLATKVFDCIPRPNVFV----CNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFT 133
F + A FD + R F CN + + P AIS Y KM + N ++
Sbjct: 84 FKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYS 143
Query: 134 YPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGI----------QMYASFGL-- 181
+ L K + + + K G DV + + + A FG
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 182 ---FREARKMLD---ESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDK----NVG 231
F EA + D E G T VI +N +I+G G V A + M K +V
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPV-VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVV 262
Query: 232 SWNAMISGLARCGMIENARTLFDEMGER----DEISWSAIIDGYIKQRCFKEALEVFHQM 287
++ +++G+ + G ++A L +M E D + +SAIID K +A +F +M
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 288 QREKIKPSRHLLPSMLTVCANVGS-LDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGR 346
+ I P+ M+ + G D R + +ER I D + ALI VK G+
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER-EINPDVLTFNALISASVKEGK 381
Query: 347 LDMAWEVFEKMKVR----EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVG 402
L A ++ ++M R + T+N+MI G H R +DA +F M P+ VTF
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNT 437
Query: 403 VLNACAHAGMVERGLGLFNSMKR 425
+++ A V+ G+ L + R
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISR 460
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 82/202 (40%), Gaps = 43/202 (21%)
Query: 336 ALIDMYVKCGRLDMAWEVFEKMK----VREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGE 391
AL V+ G L+ A +F++M V T+N +I GL + GR +A L KM G+
Sbjct: 197 ALFGYMVETGFLE-AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGK 255
Query: 392 KRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEE 451
+ VT+ ++N G + L L + M+ + I+P++ + ++D L + G +
Sbjct: 256 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH-IKPDVVIYSAIIDRLCKDGHHSD 314
Query: 452 AEKFIESM---PVKPNVAVWGALLNACRIHGNVELGERVGWILLDMEPRNSGRYALLSNI 508
A+ M + PNV + C I G
Sbjct: 315 AQYLFSEMLEKGIAPNVFTYN-----CMIDG----------------------------- 340
Query: 509 YAKAGRWDDVARVRKLMKERGI 530
+ GRW D R+ + M ER I
Sbjct: 341 FCSFGRWSDAQRLLRDMIEREI 362
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/367 (19%), Positives = 163/367 (44%), Gaps = 45/367 (12%)
Query: 103 LKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGL 162
+ G + G+ A++ KM + +P+ Y + G + + ++++G+
Sbjct: 268 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 327
Query: 163 TGDVHIKSAGIQMYASFGLFREARKMLDE--SGKTQTDVICWNAMIDGYLKCGEVEAANE 220
+V + I + SFG + +A+++L + + DV+ +NA+I +K G++ A +
Sbjct: 328 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 387
Query: 221 VFVNMPDK----NVGSWNAMISGLARCGMIENARTLFDEMGERDEISWSAIIDGYIKQRC 276
+ M + + ++N+MI G + ++A+ +FD M D ++++ IID Y + +
Sbjct: 388 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKR 447
Query: 277 FKEALEVFHQMQR--------------------EKIKPSRHLLPSMLT--VCANVGS--- 311
E +++ ++ R + + ++ L M++ VC + +
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507
Query: 312 ----------LDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVR- 360
L++ + ++ + I +D V +I K ++D AW++F + +
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567
Query: 361 ---EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGL 417
+V T+N MI G DA LF KM +P+ T+ ++ C AG +++ +
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSI 627
Query: 418 GLFNSMK 424
L + M+
Sbjct: 628 ELISEMR 634
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/406 (20%), Positives = 170/406 (41%), Gaps = 22/406 (5%)
Query: 94 PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQF 153
P V N + G G +A + +KM+ + TY T+ G K +
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDE--SGKTQTDVICWNAMIDGYLK 211
+ + + + DV I SA I G +A+ + E +V +N MIDG+
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343
Query: 212 CGEVEAANEVFVNMPDK----NVGSWNAMISGLARCGMIENARTLFDEMGER----DEIS 263
G A + +M ++ +V ++NA+IS + G + A L DEM R D ++
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403
Query: 264 WSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVE 323
++++I G+ K F +A +F M P +++ V +D+G + +
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459
Query: 324 RNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVS----TWNAMIGGLAIHGRAE 379
R + + LI + + L+ A ++F++M V T N ++ G + + E
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 519
Query: 380 DAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCV 439
+A++LF + K + V + +++ V+ LF S+ ++ +EP+++ + +
Sbjct: 520 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLP-IHGVEPDVQTYNVM 578
Query: 440 VDLLGRAGLVEEAEKFIESMPV---KPNVAVWGALLNACRIHGNVE 482
+ + +A M +P+ + + L+ C G ++
Sbjct: 579 ISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEID 624
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 158/383 (41%), Gaps = 41/383 (10%)
Query: 78 FNNFTLATKVFDCIPRPNVFV----CNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFT 133
F + A FD + R F CN + + P AIS Y KM + N ++
Sbjct: 84 FKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYS 143
Query: 134 YPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGI----------QMYASFGL-- 181
+ L K + + + K G DV + + + A FG
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 182 ---FREARKMLD---ESGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDK----NVG 231
F EA + D E G T VI +N +I+G G V A + M K +V
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPV-VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVV 262
Query: 232 SWNAMISGLARCGMIENARTLFDEMGER----DEISWSAIIDGYIKQRCFKEALEVFHQM 287
++ +++G+ + G ++A L +M E D + +SAIID K +A +F +M
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 288 QREKIKPSRHLLPSMLTVCANVGSL-DQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGR 346
+ I P+ M+ + G D R + +ER I D + ALI VK G+
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER-EINPDVLTFNALISASVKEGK 381
Query: 347 LDMAWEVFEKMKVR----EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVG 402
L A ++ ++M R + T+N+MI G H R +DA +F M P+ VTF
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNT 437
Query: 403 VLNACAHAGMVERGLGLFNSMKR 425
+++ A V+ G+ L + R
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISR 460
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 69/172 (40%), Gaps = 38/172 (22%)
Query: 362 VSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFN 421
V T+N +I GL + GR +A L KM G+ + VT+ ++N G + L L +
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285
Query: 422 SMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESM---PVKPNVAVWGALLNACRIH 478
M+ + I+P++ + ++D L + G +A+ M + PNV + C I
Sbjct: 286 KMEETH-IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYN-----CMID 339
Query: 479 GNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDVARVRKLMKERGI 530
G + GRW D R+ + M ER I
Sbjct: 340 G-----------------------------FCSFGRWSDAQRLLRDMIEREI 362
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 121/549 (22%), Positives = 204/549 (37%), Gaps = 105/549 (19%)
Query: 86 KVFDCIPRP----NVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKAC 141
+VFD +P +VF + NG ++ +M P+ TY T+ AC
Sbjct: 162 EVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINAC 221
Query: 142 AVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLDESGKTQTDVIC 201
A G EG+ GLF E R Q D++
Sbjct: 222 ARGGLDWEGL---------------------------LGLFAEMRHE-----GIQPDIVT 249
Query: 202 WNAMIDGYLKCGEVEAANEVFVNMPD----KNVGSWNAMISGLARCGMIENARTLFDEMG 257
+N ++ G + A VF M D ++ +++ ++ + +E L EM
Sbjct: 250 YNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMA 309
Query: 258 E----RDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLD 313
D S++ +++ Y K KEA+ VFHQMQ P+ + +L + G D
Sbjct: 310 SGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYD 369
Query: 314 QGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREV----STWNAMI 369
R + ++ ++ DA LI+++ + G +F M + T+ +I
Sbjct: 370 DVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGII 429
Query: 370 GGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEI 429
G EDA K+ M P+ + GV+ A A + E L FN+M V
Sbjct: 430 FACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGS- 488
Query: 430 EPEMEHFGCVVDLLGRAGLVEEAEKFIESM---PVKPNVAVWGALLNACRIHGNVELGER 486
P +E F ++ R GLV+E+E + + + N + A + A + G E +
Sbjct: 489 NPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVK 548
Query: 487 VGWILLDME-----PRNSGRYALLS----------------------------------N 507
+DME P A+LS
Sbjct: 549 T---YVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLA 605
Query: 508 IYAKAGRWDDVARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEK 567
+Y K RWDDV + + M + S++ + G++ + D S+ Q ++E
Sbjct: 606 VYGKTERWDDVNELLEEMLSNRV-----SNIHQVIGQMIKGDYDDDSNWQ------IVEY 654
Query: 568 MMDKLQIEG 576
++DKL EG
Sbjct: 655 VLDKLNSEG 663
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 132/263 (50%), Gaps = 17/263 (6%)
Query: 277 FKEALEVFHQMQREK-IKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGT 335
++ +L +F MQR+ KP+ H+ M+++ G LD+ + + + T
Sbjct: 121 WQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYT 180
Query: 336 ALIDMYVKCGRLDMAWEVFEKMKVREVS----TWNAMIGGLAIHGRA-EDAMKLFTKMNG 390
ALI+ Y + GR + + E+ ++MK ++S T+N +I A G E + LF +M
Sbjct: 181 ALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRH 240
Query: 391 EKRKPNGVTFVGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVE 450
E +P+ VT+ +L+ACA G+ + +F +M I P++ + +V+ G+ +E
Sbjct: 241 EGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDG-GIVPDLTTYSHLVETFGKLRRLE 299
Query: 451 EAEKFIESMPVK---PNVAVWGALLNACRIHGNVELGERVGWILLDMEPR----NSGRYA 503
+ + M P++ + LL A G+++ E +G + M+ N+ Y+
Sbjct: 300 KVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIK--EAMG-VFHQMQAAGCTPNANTYS 356
Query: 504 LLSNIYAKAGRWDDVARVRKLMK 526
+L N++ ++GR+DDV ++ MK
Sbjct: 357 VLLNLFGQSGRYDDVRQLFLEMK 379
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 154/378 (40%), Gaps = 37/378 (9%)
Query: 134 YPTLFKACAVTGSVKEGVQFHAFVVKQ-GLTGDVHIKSAGIQMYASFGLFREARKMLDE- 191
+ +FK A G + ++ ++ +Q + HI + I + GL + ++ DE
Sbjct: 108 FALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEM 167
Query: 192 -SGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDKNVG----SWNAMISGLARCGM- 245
S V + A+I+ Y + G E + E+ M ++ + ++N +I+ AR G+
Sbjct: 168 PSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLD 227
Query: 246 IENARTLFDEMG----ERDEISWSAIIDGYIKQRCFKEALEVFHQMQREKIKPS----RH 297
E LF EM + D ++++ ++ + EA VF M I P H
Sbjct: 228 WEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSH 287
Query: 298 LLPS------MLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRLDMAW 351
L+ + + VC +G + G + N L++ Y K G + A
Sbjct: 288 LVETFGKLRRLEKVCDLLGEMASGGSLPDITSYN----------VLLEAYAKSGSIKEAM 337
Query: 352 EVFEKMKVR----EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGVLNAC 407
VF +M+ +T++ ++ GR +D +LF +M P+ T+ ++
Sbjct: 338 GVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVF 397
Query: 408 AHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVKPNVAV 467
G + + LF+ M IEP+ME + ++ G+ GL E+A K ++ M V
Sbjct: 398 GEGGYFKEVVTLFHDMVE-ENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPS 456
Query: 468 WGALLNACRIHGNVELGE 485
A G L E
Sbjct: 457 SKAYTGVIEAFGQAALYE 474
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 188/445 (42%), Gaps = 30/445 (6%)
Query: 62 DHFVSGTLLKCYANPNFNNFTLATKVFDCIP----RPNVFVCNIYLKGSIENGEPHKAIS 117
D F +L+ Y + A KVF+ +P R N + G +A+
Sbjct: 252 DFFTYTSLIMGYCQRK--DLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMD 309
Query: 118 CYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYA 177
+ KM P TY L K+ + E + + + G+ ++H + I
Sbjct: 310 LFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLC 369
Query: 178 SFGLFREARKMLDE--SGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDK----NVG 231
S F +AR++L + +VI +NA+I+GY K G +E A +V M + N
Sbjct: 370 SQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTR 429
Query: 232 SWNAMISGLARCGMIENARTLFDEMGER----DEISWSAIIDGYIKQRCFKEALEVFHQM 287
++N +I G + + A + ++M ER D ++++++IDG + F A + M
Sbjct: 430 TYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLM 488
Query: 288 QREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGRL 347
+ P + SM+ +++ + +E+ + + V+ TALID Y K G++
Sbjct: 489 NDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKV 548
Query: 348 DMAWEVFEKMKVREV----STWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVGV 403
D A + EKM + T+NA+I GL G+ ++A L KM +P T +
Sbjct: 549 DEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTIL 608
Query: 404 LNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMP--- 460
++ G + F M +P+ + + R G + +AE + M
Sbjct: 609 IHRLLKDGDFDHAYSRFQQMLSS-GTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667
Query: 461 VKPNVAVWGALLNACRIHGNVELGE 485
V P++ + +L I G +LG+
Sbjct: 668 VSPDLFTYSSL-----IKGYGDLGQ 687
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 165/380 (43%), Gaps = 28/380 (7%)
Query: 119 YHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQFHAFVVKQGLTGDVHIKSAGIQMYAS 178
Y +M+ PN +TY + G+V+E Q+ + +V+ GL D ++ I Y
Sbjct: 206 YMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQ 265
Query: 179 FGLFREARKMLDES--GKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMPDK----NVGS 232
A K+ +E + + + + +I G ++ A ++FV M D V +
Sbjct: 266 RKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRT 325
Query: 233 WNAMISGLARCGMIENARTL-----FDEMGERDEI-SWSAIIDGYIKQRCFKEALEVFHQ 286
+ +I L CG + L +E G + I +++ +ID Q F++A E+ Q
Sbjct: 326 YTVLIKSL--CGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQ 383
Query: 287 MQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGR 346
M + + P+ +++ G ++ + +E + + LI Y K
Sbjct: 384 MLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SN 442
Query: 347 LDMAWEVFEKMKVR----EVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVG 402
+ A V KM R +V T+N++I G G + A +L + MN P+ T+
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTS 502
Query: 403 VLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVK 462
++++ + VE LF+S+++ + P + + ++D +AG V+EA +E M K
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQ-KGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSK 561
Query: 463 ---PNVAVWGALLNACRIHG 479
PN + AL IHG
Sbjct: 562 NCLPNSLTFNAL-----IHG 576
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 183/411 (44%), Gaps = 28/411 (6%)
Query: 177 ASFGLFREARKMLDE--SGKTQTDVICWNAMIDGYLKCGEVEAANEVFVNMP----DKNV 230
A FGL E +++ E K ++ +N M++GY K G VE AN+ + D +
Sbjct: 194 ARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDF 253
Query: 231 GSWNAMISGLARCGMIENARTLFDEMG----ERDEISWSAIIDGYIKQRCFKEALEVFHQ 286
++ ++I G + +++A +F+EM R+E++++ +I G R EA+++F +
Sbjct: 254 FTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVK 313
Query: 287 MQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKCGR 346
M+ ++ P+ ++ + + +E I+ + T LID +
Sbjct: 314 MKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCK 373
Query: 347 LDMAWEV----FEKMKVREVSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTFVG 402
+ A E+ EK + V T+NA+I G G EDA+ + M K PN T+
Sbjct: 374 FEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNE 433
Query: 403 VLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESMPVK 462
++ + V + +G+ N M ++ P++ + ++D R+G + A + + M +
Sbjct: 434 LIKGYCKSN-VHKAMGVLNKMLE-RKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDR 491
Query: 463 ---PNVAVWGALLNA-CRIHGNVELGERVGWILLDMEPRNSGRYALLSNIYAKAGRWDDV 518
P+ + +++++ C+ E + + N Y L + Y KAG+ D+
Sbjct: 492 GLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEA 551
Query: 519 ARVRKLMKERGIETVPGSSMMDMGGKVHEFKMGDSSHPQMKEIYLMLEKMM 569
LM E+ + + + +H G + ++KE L+ EKM+
Sbjct: 552 ----HLMLEKMLSKNCLPNSLTFNALIH----GLCADGKLKEATLLEEKMV 594
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 160/398 (40%), Gaps = 33/398 (8%)
Query: 94 PNVFVCNIYLKGSIENGEPHKAISCYHKMMVLNSRPNKFTYPTLFKACAVTGSVKEGVQF 153
PN N +KG ++ HKA+ +KM+ P+ TY +L +G+ +
Sbjct: 426 PNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 154 HAFVVKQGLTGDVHIKSAGIQMYASFGLFREARKMLD--ESGKTQTDVICWNAMIDGYLK 211
+ + +GL D ++ I EA + D E +V+ + A+IDGY K
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 212 CGEVEAANEVFVNMPDKNVG----SWNAMISGLARCGMIENARTLFDEM---GERDEISW 264
G+V+ A+ + M KN ++NA+I GL G ++ A L ++M G + +S
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVST 604
Query: 265 SAI-IDGYIKQRCFKEALEVFHQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVE 323
I I +K F A F QM KP H + + G L + + +
Sbjct: 605 DTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMR 664
Query: 324 RNSIQVDAVLGTALIDMYVKCGRLDMAWEVFEKMKVREVS----TWNAMIGGL--AIHGR 377
N + D ++LI Y G+ + A++V ++M+ T+ ++I L +G+
Sbjct: 665 ENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGK 724
Query: 378 A----------------EDAMKLFTKMNGEKRKPNGVTFVGVLNACAHAGMVERGLGLFN 421
+ ++L KM PN ++ ++ G + +F+
Sbjct: 725 QKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFD 784
Query: 422 SMKRVYEIEPEMEHFGCVVDLLGRAGLVEEAEKFIESM 459
M+R I P F ++ + EA K ++ M
Sbjct: 785 HMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDM 822
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 151/334 (45%), Gaps = 34/334 (10%)
Query: 230 VGSWNAMISGLARCGMIENARTLFDEMGERDEI-----SWSAIIDGYIKQRCFKEALEVF 284
+G +N +++ LAR G+++ + ++ EM E D++ +++ +++GY K +EA +
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLE-DKVCPNIYTYNKMVNGYCKLGNVEEANQYV 241
Query: 285 HQMQREKIKPSRHLLPSMLTVCANVGSLDQGRWIHSFVERNSIQVDAVLGTALIDMYVKC 344
++ + P S++ LD + + + + + V T LI
Sbjct: 242 SKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVA 301
Query: 345 GRLDMAWEVFEKMKVRE----VSTWNAMIGGLAIHGRAEDAMKLFTKMNGEKRKPNGVTF 400
R+D A ++F KMK E V T+ +I L R +A+ L +M KPN T+
Sbjct: 302 RRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTY 361
Query: 401 VGVLNACAHAGMVERGLGLFNSMKRVYEIEPEMEHFGCVVDLLGRAGLVEEA---EKFIE 457
++++ E+ L M + P + + +++ + G++E+A + +E
Sbjct: 362 TVLIDSLCSQCKFEKARELLGQMLE-KGLMPNVITYNALINGYCKRGMIEDAVDVVELME 420
Query: 458 SMPVKPNVAVWGALLNA-CRIHGNVELG------ERVGWILLDMEPRNSGRYALLSNIYA 510
S + PN + L+ C+ + + +G ER +L D+ NS L +
Sbjct: 421 SRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLER--KVLPDVVTYNS-----LIDGQC 473
Query: 511 KAGRWDDVARVRKLMKERGIETVPG----SSMMD 540
++G +D R+ LM +RG+ VP +SM+D
Sbjct: 474 RSGNFDSAYRLLSLMNDRGL--VPDQWTYTSMID 505