Miyakogusa Predicted Gene
- Lj5g3v1514610.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1514610.1 tr|B9GR57|B9GR57_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_552315 PE=4
SV=1,24.38,0.000000000000001,no description,Tetratricopeptide-like
helical; PPR_2,Pentatricopeptide repeat;
PPR,Pentatricopeptide,CUFF.55377.1
(484 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 552 e-157
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 387 e-108
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 373 e-103
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 350 2e-96
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 347 1e-95
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 329 2e-90
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 328 6e-90
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 1e-89
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 323 2e-88
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 322 3e-88
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 319 3e-87
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 318 7e-87
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 317 1e-86
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 2e-86
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 315 4e-86
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 311 6e-85
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 5e-84
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 2e-83
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 306 3e-83
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 305 3e-83
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 303 2e-82
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 3e-82
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 302 3e-82
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 300 2e-81
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 299 3e-81
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 297 1e-80
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 2e-80
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 4e-80
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 295 6e-80
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 294 8e-80
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 2e-79
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 3e-79
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 292 5e-79
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 290 2e-78
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 289 4e-78
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 9e-78
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 7e-77
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 1e-76
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 4e-76
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 282 5e-76
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 7e-76
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 9e-76
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 4e-75
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 278 6e-75
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 6e-75
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 277 1e-74
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 275 4e-74
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 4e-74
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 6e-74
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 6e-74
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 272 3e-73
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 4e-73
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 5e-73
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 271 1e-72
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 3e-72
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 4e-72
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 268 5e-72
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 268 6e-72
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 7e-72
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 266 3e-71
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 4e-71
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 4e-71
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 7e-71
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 1e-70
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 1e-70
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 262 3e-70
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 4e-70
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 6e-70
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 1e-69
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 1e-69
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 1e-69
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 259 2e-69
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 258 5e-69
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 7e-69
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 7e-69
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 2e-68
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 256 4e-68
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 4e-68
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 6e-68
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 1e-67
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 2e-67
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 3e-67
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 252 4e-67
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 4e-67
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 1e-66
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 1e-66
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 2e-66
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 2e-66
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 4e-66
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 248 8e-66
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 1e-65
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 2e-65
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 3e-65
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 3e-65
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 246 3e-65
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 4e-65
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 4e-65
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 4e-65
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 245 5e-65
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 8e-65
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 244 1e-64
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 244 1e-64
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 4e-64
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 7e-64
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 241 9e-64
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 239 4e-63
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 4e-63
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 239 4e-63
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 5e-63
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 6e-63
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 238 6e-63
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 7e-63
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 8e-63
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 9e-63
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 236 2e-62
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 1e-61
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 3e-61
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 3e-61
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 232 5e-61
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 8e-61
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 231 9e-61
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 1e-60
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 230 1e-60
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 229 3e-60
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 229 3e-60
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 229 3e-60
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 4e-60
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 4e-60
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 5e-60
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 227 1e-59
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 2e-59
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 2e-59
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 4e-59
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 4e-59
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 4e-59
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 5e-59
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 225 7e-59
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 2e-58
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 223 2e-58
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 222 4e-58
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 5e-58
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 221 8e-58
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 219 2e-57
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 4e-57
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 6e-57
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 1e-56
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 6e-56
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 6e-56
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 7e-56
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 214 1e-55
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 1e-55
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 214 1e-55
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 214 1e-55
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 214 1e-55
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 2e-55
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 2e-55
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 210 1e-54
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 2e-54
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 210 2e-54
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 2e-54
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 2e-54
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 2e-54
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 2e-54
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 6e-54
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 7e-54
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 7e-54
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 1e-53
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 1e-53
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 2e-53
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 2e-53
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 4e-53
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 2e-52
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 4e-50
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 4e-50
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 5e-50
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 7e-50
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 4e-49
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 7e-49
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 190 2e-48
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 5e-48
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 3e-46
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 5e-46
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 3e-45
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 178 8e-45
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 1e-43
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 174 1e-43
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 2e-40
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 1e-38
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 9e-36
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 145 6e-35
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 7e-32
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 107 1e-23
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 3e-22
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 4e-22
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 102 8e-22
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 5e-21
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 5e-21
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 97 3e-20
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 96 5e-20
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 4e-19
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 7e-19
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 91 2e-18
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 90 3e-18
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 5e-18
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 5e-18
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 1e-17
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 9e-17
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 1e-16
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 3e-16
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 5e-16
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 8e-16
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 8e-16
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 82 9e-16
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 81 2e-15
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 81 2e-15
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 4e-15
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 80 4e-15
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 1e-14
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 4e-14
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 7e-14
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-13
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 74 3e-13
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 72 6e-13
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 72 9e-13
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 72 1e-12
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 2e-12
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 68 2e-11
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 2e-11
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 6e-11
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 65 8e-11
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 65 1e-10
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 61 1e-09
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 61 2e-09
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 61 2e-09
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 58 1e-08
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 57 4e-08
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 55 1e-07
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 54 2e-07
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 53 5e-07
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 53 6e-07
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 51 2e-06
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 50 4e-06
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 552 bits (1423), Expect = e-157, Method: Compositional matrix adjust.
Identities = 258/478 (53%), Positives = 351/478 (73%), Gaps = 3/478 (0%)
Query: 7 QIERRILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNH 66
+IER++L LLHG TRT+L +IHAH LRH LH SN +LAHFIS+C SL YA RVF+H
Sbjct: 2 EIERKLLRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSH 61
Query: 67 SPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQL 126
NPN+++FN++IK SL P + FS M+ +R I D +T+ LLK+ S+L D +
Sbjct: 62 IQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMK-SRGIWADEYTYAPLLKSCSSLSDLRF 120
Query: 127 GQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCK 186
G+ +H ++ GF R G +R+GVVELY + RMGDA KVFDEM ER+V+VWNLMI+G+C
Sbjct: 121 GKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCD 180
Query: 187 VGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTV 246
G++E GL LF++M +RS+VSWN MIS L+K ++ EAL LF EM+++GF+PD+AT+VTV
Sbjct: 181 SGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTV 240
Query: 247 LPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRN 306
LP+ A LG D G+WIHS A G +D ++VGN+LVDFYCK G+ +A ++F +M RN
Sbjct: 241 LPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRN 300
Query: 307 VVSWNAMISGMAYNGMGEVGVGLFEDMVR--GVTPNDSTFVGVLACCAHAGLVDRGRELF 364
VVSWN +ISG A NG GE G+ LF+ M+ V PN++TF+GVLACC++ G V+RG ELF
Sbjct: 301 VVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELF 360
Query: 365 DSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGD 424
M +F+L + EHYG +VDL+ R G + EA +++MP+ AA+WG+LLSACR+HGD
Sbjct: 361 GLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGD 420
Query: 425 REIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQSA 482
++AE+AA ELV +EP NSG++VLLSN+YAEE RW +VEKVR LM++ ++K GQS
Sbjct: 421 VKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQST 478
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 387 bits (995), Expect = e-108, Method: Compositional matrix adjust.
Identities = 181/479 (37%), Positives = 296/479 (61%), Gaps = 2/479 (0%)
Query: 4 GLQQIERRILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRV 63
G++++E + L K+R + +I+A + HGL S+ ++ + C + + YATR+
Sbjct: 5 GIREVENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRL 64
Query: 64 FNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRD 123
FN NPN+ L+NSII+A + + + ++ + PD FTFP + K+ ++L
Sbjct: 65 FNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGS 124
Query: 124 FQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQG 183
LG+ +H + G H ++++Y + + DA KVFDEM ERDVI WN ++ G
Sbjct: 125 CYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSG 184
Query: 184 YCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATL 243
Y ++G+++ LF M D+++VSW MIS EA+ FREM G EPD+ +L
Sbjct: 185 YARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISL 244
Query: 244 VTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMP 303
++VLP CA+LG+ ++G+WIH YA +GFL+ V N+L++ Y KCG + +F +M
Sbjct: 245 ISVLPSCAQLGSLELGKWIHLYAERRGFLKQ-TGVCNALIEMYSKCGVISQAIQLFGQME 303
Query: 304 MRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRG-VTPNDSTFVGVLACCAHAGLVDRGRE 362
++V+SW+ MISG AY+G + F +M R V PN TF+G+L+ C+H G+ G
Sbjct: 304 GKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLR 363
Query: 363 LFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTH 422
FD M +Q+ PK+EHYGC++D+L R G + A+++ ++MPM+P + +WG+LLS+CRT
Sbjct: 364 YFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTP 423
Query: 423 GDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
G+ ++A +A LV +EP + G++VLL+NIYA+ +W++V ++R ++R ++KK PG S
Sbjct: 424 GNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGS 482
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 373 bits (958), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/472 (41%), Positives = 289/472 (61%), Gaps = 7/472 (1%)
Query: 16 LHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILF 75
+HG +T L Q H + + GL+ N +A FI C++ + YA VF H P PN L
Sbjct: 23 IHGNNLKT-LKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLH 81
Query: 76 NSIIKACSLSPPFQQCFHLFSLMRNARAI--SPDYFTFPSLLKAASNLRDFQLGQSLHAQ 133
N++I+A SL ++ R A+ PD FTFP +LK A + D G+ +H Q
Sbjct: 82 NTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQ 141
Query: 134 VTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETG 193
V GF V G++++Y +C +GDA K+FDEM +DV VWN ++ GY KVGE++
Sbjct: 142 VVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEA 201
Query: 194 LELFRRM--GDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCA 251
L M R+ VSW +IS AK + EA+ +F+ ML + EPD+ TL+ VL CA
Sbjct: 202 RSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACA 261
Query: 252 RLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWN 311
LG+ ++GE I SY + +G R VS+ N+++D Y K GN L VF + RNVV+W
Sbjct: 262 DLGSLELGERICSYVDHRGMNR-AVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWT 320
Query: 312 AMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVK 370
+I+G+A +G G + +F MV+ GV PND TF+ +L+ C+H G VD G+ LF+SM K
Sbjct: 321 TIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSK 380
Query: 371 FQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEI 430
+ + P +EHYGC++DLLGR G +REA ++I+SMP + AA+WG+LL+A H D E+ E
Sbjct: 381 YGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGER 440
Query: 431 AAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQSA 482
A EL+ +EP NSG+++LL+N+Y+ RWDE +R +M+ +KK+ G+S+
Sbjct: 441 ALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESS 492
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 350 bits (897), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 183/476 (38%), Positives = 272/476 (57%), Gaps = 6/476 (1%)
Query: 13 LSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVC---ASLHRVPYATRVFNHSPN 69
+S L + +L QIHA L+ GL + + F+S C S +PYA VF+
Sbjct: 18 MSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDR 77
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQS 129
P+ L+N +I+ S S ++ L+ M + A + +TFPSLLKA SNL F+
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSA-PHNAYTFPSLLKACSNLSAFEETTQ 136
Query: 130 LHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGE 189
+HAQ+T LG+ ++ YA A +FD + E D + WN +I+GY K G+
Sbjct: 137 IHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGK 196
Query: 190 LETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPV 249
++ L LFR+M +++ +SW MIS + +EAL LF EM EPD+ +L L
Sbjct: 197 MDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSA 256
Query: 250 CARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVS 309
CA+LGA + G+WIHSY N D V +G L+D Y KCG + L VF + ++V +
Sbjct: 257 CAQLGALEQGKWIHSYLNKTRIRMDSV-LGCVLIDMYAKCGEMEEALEVFKNIKKKSVQA 315
Query: 310 WNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMA 368
W A+ISG AY+G G + F +M + G+ PN TF VL C++ GLV+ G+ +F SM
Sbjct: 316 WTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSME 375
Query: 369 VKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIA 428
+ L P +EHYGC+VDLLGR G + EA I+ MP++P A +WGALL ACR H + E+
Sbjct: 376 RDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELG 435
Query: 429 EIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQSATT 484
E + L+ ++P++ G +V +NI+A + +WD+ + R LM+E + KVPG S +
Sbjct: 436 EEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTIS 491
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 347 bits (890), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 191/478 (39%), Positives = 275/478 (57%), Gaps = 12/478 (2%)
Query: 12 ILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLH--RVPYATRVFNHSPN 69
++S L Q+ QIH H LR GL S IL I L PYA RV
Sbjct: 52 LISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQF 111
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQS 129
N L+ ++I+ ++ F + ++ MR I+P FTF +LLKA ++D LG+
Sbjct: 112 RNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEE-ITPVSFTFSALLKACGTMKDLNLGRQ 170
Query: 130 LHAQVTTL-GFARHGPVRVG--VVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCK 186
HAQ L GF V VG ++++Y CE + A KVFDEM ERDVI W +I Y +
Sbjct: 171 FHAQTFRLRGFCF---VYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYAR 227
Query: 187 VGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTV 246
VG +E ELF + + +V+W M++ A+ K +EAL F M + G D+ T+
Sbjct: 228 VGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGY 287
Query: 247 LPVCARLGAADVGEWIHSYANDKGFL-RDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR 305
+ CA+LGA+ + A G+ D V +G++L+D Y KCGN + ++VF M +
Sbjct: 288 ISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNK 347
Query: 306 NVVSWNAMISGMAYNGMGEVGVGLFEDMVRG--VTPNDSTFVGVLACCAHAGLVDRGREL 363
NV ++++MI G+A +G + + LF MV + PN TFVG L C+H+GLVD+GR++
Sbjct: 348 NVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQV 407
Query: 364 FDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHG 423
FDSM F + P +HY C+VDLLGR G ++EAL+LI++M +EP +WGALL ACR H
Sbjct: 408 FDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHN 467
Query: 424 DREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
+ EIAEIAA+ L +EP G+++LLSN+YA W V +VR L++E +KK P S
Sbjct: 468 NPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVS 525
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 329 bits (844), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 183/487 (37%), Positives = 276/487 (56%), Gaps = 22/487 (4%)
Query: 16 LHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCAS--LHR--VPYATRVFNHSPNPN 71
++ +T L+QIHA F++ G A + CA+ LH + YA ++FN P N
Sbjct: 30 INNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRN 89
Query: 72 IILFNSIIKACSLSPPFQQ--CFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQS 129
+N+II+ S S + LF M + + P+ FTFPS+LKA + Q G+
Sbjct: 90 CFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQ 149
Query: 130 LHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVF------------DEMRERD--VI 175
+H GF V +V +Y C M DA +F + R+RD ++
Sbjct: 150 IHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIV 209
Query: 176 VWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKG 235
+WN+MI GY ++G+ + LF +M RSVVSWN MIS + ++A+ +FREM +
Sbjct: 210 LWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGD 269
Query: 236 FEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAG 295
P+ TLV+VLP +RLG+ ++GEW+H YA D G D V +G++L+D Y KCG +
Sbjct: 270 IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDV-LGSALIDMYSKCGIIEKA 328
Query: 296 LSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHA 354
+ VF +P NV++W+AMI+G A +G + F M + GV P+D ++ +L C+H
Sbjct: 329 IHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHG 388
Query: 355 GLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGA 414
GLV+ GR F M L P++EHYGC+VDLLGR G + EA + I +MP++P +W A
Sbjct: 389 GLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKA 448
Query: 415 LLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHI 474
LL ACR G+ E+ + A L+++ P +SG +V LSN+YA + W EV ++R+ M+E I
Sbjct: 449 LLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDI 508
Query: 475 KKVPGQS 481
+K PG S
Sbjct: 509 RKDPGCS 515
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 328 bits (840), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 173/487 (35%), Positives = 272/487 (55%), Gaps = 39/487 (8%)
Query: 30 AHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKA-CSLSPPF 88
A ++ L+ +++ FI+ C S R+ A PN+ ++N++ K + S P
Sbjct: 794 AAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPI 853
Query: 89 QQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVG 148
+ ++R++ +SP +T+ SL+KA+S F G+SL A + GF H ++
Sbjct: 854 RSLELYVRMLRDS--VSPSSYTYSSLVKASSFASRF--GESLQAHIWKFGFGFHVKIQTT 909
Query: 149 VVELYANCERMGDAGKVFDEMRERDVIVW------------------------------- 177
+++ Y+ R+ +A KVFDEM ERD I W
Sbjct: 910 LIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATS 969
Query: 178 NLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFE 237
N +I GY +G LE LF +M + ++SW MI ++ K+ EA+ +F +M+E+G
Sbjct: 970 NCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGII 1029
Query: 238 PDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLS 297
PD+ T+ TV+ CA LG ++G+ +H Y GF+ D V +G++LVD Y KCG+ + L
Sbjct: 1030 PDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLD-VYIGSALVDMYSKCGSLERALL 1088
Query: 298 VFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGL 356
VF +P +N+ WN++I G+A +G + + +F M + V PN TFV V C HAGL
Sbjct: 1089 VFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGL 1148
Query: 357 VDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALL 416
VD GR ++ SM + ++ +EHYG +V L + G + EAL+LI +M EP A +WGALL
Sbjct: 1149 VDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALL 1208
Query: 417 SACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKK 476
CR H + IAEIA +L+ +EP NSG++ LL ++YAE+ RW +V ++R MRE I+K
Sbjct: 1209 DGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEK 1268
Query: 477 V-PGQSA 482
+ PG S+
Sbjct: 1269 ICPGTSS 1275
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 327 bits (838), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/472 (36%), Positives = 273/472 (57%), Gaps = 39/472 (8%)
Query: 17 HGAKTRTQLTQIHAHFLRHGLHHSNQILA-HFISVCASLHRVP---YATRVFNHSPNP-N 71
+G + T+L QIHA +RHG+ S+ L H I SL P YA +VF+ P N
Sbjct: 25 YGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPIN 84
Query: 72 IILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLH 131
+ ++N++I+ + F L+ MR + + PD T+P L+KA + + D +LG+++H
Sbjct: 85 VFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIH 144
Query: 132 AQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELE 191
+ V GF V+ ++ LYANC G++
Sbjct: 145 SVVIRSGFGSLIYVQNSLLHLYANC-------------------------------GDVA 173
Query: 192 TGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCA 251
+ ++F +M ++ +V+WN +I+ A+ K EEAL L+ EM KG +PD T+V++L CA
Sbjct: 174 SAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACA 233
Query: 252 RLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWN 311
++GA +G+ +H Y G R++ S N L+D Y +CG + ++F+EM +N VSW
Sbjct: 234 KIGALTLGKRVHVYMIKVGLTRNLHS-SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWT 292
Query: 312 AMISGMAYNGMGEVGVGLFEDM--VRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAV 369
++I G+A NG G+ + LF+ M G+ P + TFVG+L C+H G+V G E F M
Sbjct: 293 SLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMRE 352
Query: 370 KFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAE 429
++++ P++EH+GC+VDLL R G V++A + I+SMPM+P +W LL AC HGD ++AE
Sbjct: 353 EYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAE 412
Query: 430 IAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
A +++ +EP +SG +VLLSN+YA E RW +V+K+R M +KKVPG S
Sbjct: 413 FARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHS 464
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 323 bits (828), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 170/477 (35%), Positives = 274/477 (57%), Gaps = 10/477 (2%)
Query: 13 LSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCA--SLHRVP-----YATRVFN 65
L+LL + + L IH LR L + + +++C S P YA +F+
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 66 HSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQ 125
NPN+ +FN +I+ S + F ++ M +R I PD TFP L+KA+S +
Sbjct: 76 QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSR-IWPDNITFPFLIKASSEMECVL 134
Query: 126 LGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYC 185
+G+ H+Q+ GF V +V +YANC + AG++F +M RDV+ W M+ GYC
Sbjct: 135 VGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYC 194
Query: 186 KVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVT 245
K G +E E+F M R++ +W++MI+ AK E+A+ LF M +G ++ +V+
Sbjct: 195 KCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVS 254
Query: 246 VLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR 305
V+ CA LGA + GE + Y +++ +G +LVD + +CG+ + + VF +P
Sbjct: 255 VISSCAHLGALEFGERAYEYVVKSHMTVNLI-LGTALVDMFWRCGDIEKAIHVFEGLPET 313
Query: 306 NVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELF 364
+ +SW+++I G+A +G + F M+ G P D TF VL+ C+H GLV++G E++
Sbjct: 314 DSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIY 373
Query: 365 DSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGD 424
++M + P+LEHYGC+VD+LGR G + EA + I M ++P A + GALL AC+ + +
Sbjct: 374 ENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKN 433
Query: 425 REIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
E+AE L+ V+P +SG++VLLSNIYA +WD++E +R +M+E +KK PG S
Sbjct: 434 TEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWS 490
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 322 bits (826), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 177/475 (37%), Positives = 269/475 (56%), Gaps = 9/475 (1%)
Query: 10 RRILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPN 69
+ ++S+L K + IHA +R ++ I VC++L V YA VF++ N
Sbjct: 30 KTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSN 89
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQS 129
PN+ L+ ++I S L+ M + ++ PD + S+LKA D ++ +
Sbjct: 90 PNVYLYTAMIDGFVSSGRSADGVSLYHRMIH-NSVLPDNYVITSVLKAC----DLKVCRE 144
Query: 130 LHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGE 189
+HAQV LGF V + ++E+Y + +A K+FDEM +RD + +MI Y + G
Sbjct: 145 IHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGF 204
Query: 190 LETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPV 249
++ LELF+ + + V W MI L + K+ +AL LFREM + ++ T V VL
Sbjct: 205 IKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSA 264
Query: 250 CARLGAADVGEWIHSYA-NDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVV 308
C+ LGA ++G W+HS+ N + L + V GN+L++ Y +CG+ VF M ++V+
Sbjct: 265 CSDLGALELGRWVHSFVENQRMELSNFV--GNALINMYSRCGDINEARRVFRVMRDKDVI 322
Query: 309 SWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSM 367
S+N MISG+A +G + F DMV RG PN T V +L C+H GL+D G E+F+SM
Sbjct: 323 SYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSM 382
Query: 368 AVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREI 427
F + P++EHYGC+VDLLGR G + EA I ++P+EP + G LLSAC+ HG+ E+
Sbjct: 383 KRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMEL 442
Query: 428 AEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQSA 482
E AK L E +SG +VLLSN+YA +W E ++R MR+ I+K PG S
Sbjct: 443 GEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCST 497
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 319 bits (817), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 174/495 (35%), Positives = 259/495 (52%), Gaps = 40/495 (8%)
Query: 25 LTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSL 84
L +H+ + L ++ + + ASL V A +VF+ P N+I+ N +I++
Sbjct: 58 LRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVN 117
Query: 85 SPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGP 144
+ + + +F M + PD++TFP +LKA S +G+ +H T +G +
Sbjct: 118 NGFYGEGVKVFGTMCGCN-VRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLF 176
Query: 145 VRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLE--------- 195
V G+V +Y C + +A V DEM RDV+ WN ++ GY + + LE
Sbjct: 177 VGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVK 236
Query: 196 ----------------------------LFRRMGDRSVVSWNLMISCLAKGKKEEEALVL 227
+F +MG +S+VSWN+MI K EA+ L
Sbjct: 237 ISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVEL 296
Query: 228 FREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYC 287
+ M GFEPD ++ +VLP C A +G+ IH Y K + +++ + N+L+D Y
Sbjct: 297 YSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLL-LENALIDMYA 355
Query: 288 KCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVG 346
KCG + VF M R+VVSW AMIS ++G G V LF + G+ P+ FV
Sbjct: 356 KCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVT 415
Query: 347 VLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPME 406
LA C+HAGL++ GR F M +++ P+LEH C+VDLLGR G V+EA I+ M ME
Sbjct: 416 TLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSME 475
Query: 407 PTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVR 466
P +WGALL ACR H D +I +AA +L + P SG++VLLSNIYA+ RW+EV +R
Sbjct: 476 PNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIR 535
Query: 467 VLMREGHIKKVPGQS 481
+M+ +KK PG S
Sbjct: 536 NIMKSKGLKKNPGAS 550
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 318 bits (814), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 163/456 (35%), Positives = 265/456 (58%), Gaps = 3/456 (0%)
Query: 28 IHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPP 87
I H L+ L + + I + AS + A +VF+ SP +++ +N +I
Sbjct: 178 ILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGE 237
Query: 88 FQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRV 147
++ +++ LM + + PD T L+ + S L D G+ + V G P+
Sbjct: 238 AEKAIYVYKLME-SEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVN 296
Query: 148 GVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVS 207
++++++ C + +A ++FD + +R ++ W MI GY + G L+ +LF M ++ VV
Sbjct: 297 ALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVL 356
Query: 208 WNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYAN 267
WN MI + K+ ++AL LF+EM +PD+ T++ L C++LGA DVG WIH Y
Sbjct: 357 WNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYI- 415
Query: 268 DKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGV 327
+K L V++G SLVD Y KCGN LSVF+ + RN +++ A+I G+A +G +
Sbjct: 416 EKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAI 475
Query: 328 GLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDL 386
F +M+ G+ P++ TF+G+L+ C H G++ GR+ F M +F L P+L+HY +VDL
Sbjct: 476 SYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDL 535
Query: 387 LGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGHH 446
LGR G + EA L+ SMPME AA+WGALL CR HG+ E+ E AAK+L+ ++P +SG +
Sbjct: 536 LGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIY 595
Query: 447 VLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQSA 482
VLL +Y E W++ ++ R +M E ++K+PG S+
Sbjct: 596 VLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSS 631
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/462 (25%), Positives = 204/462 (44%), Gaps = 70/462 (15%)
Query: 12 ILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCA--SLHRVPYATRVFNHSPN 69
+LSLL K L QI A + +GL + I+ CA + Y+ ++ N
Sbjct: 56 LLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIEN 115
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFS-LMRNARAIS-PDYFTFPSLLKAASNLRDFQLG 127
PNI +N I+ S S ++ F L+ ++R+ S PD+FT+P L K ++LR LG
Sbjct: 116 PNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLG 175
Query: 128 QSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKV 187
+ V L V + ++A+C M +A KVFDE RD++ WN +I GY K+
Sbjct: 176 HMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKI 235
Query: 188 GELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVL 247
GE E+A+ +++ M +G +PDD T++ ++
Sbjct: 236 GE-------------------------------AEKAIYVYKLMESEGVKPDDVTMIGLV 264
Query: 248 PVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNV 307
C+ LG + G+ + Y + G LR + + N+L+D + KCG+ +F+ + R +
Sbjct: 265 SSCSMLGDLNRGKEFYEYVKENG-LRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTI 323
Query: 308 VSWNAMISGMAYNGMGEVGVGLFEDM--------------------------------VR 335
VSW MISG A G+ +V LF+DM
Sbjct: 324 VSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTS 383
Query: 336 GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVRE 395
P++ T + L+ C+ G +D G + + K+ L + +VD+ +CG++ E
Sbjct: 384 NTKPDEITMIHCLSACSQLGALDVGIWIHRYIE-KYSLSLNVALGTSLVDMYAKCGNISE 442
Query: 396 ALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVN 437
AL + + + + A++ HGD A E+++
Sbjct: 443 ALSVFHGIQTRNSLT-YTAIIGGLALHGDASTAISYFNEMID 483
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 317 bits (812), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 187/541 (34%), Positives = 282/541 (52%), Gaps = 76/541 (14%)
Query: 14 SLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNII 73
SL+ A + QL QIHA L GL S ++ I +S + +A +VF+ P P I
Sbjct: 26 SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIF 85
Query: 74 LFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQ 133
+N+II+ S + FQ ++S M+ AR +SPD FTFP LLKA S L Q+G+ +HAQ
Sbjct: 86 PWNAIIRGYSRNNHFQDALLMYSNMQLAR-VSPDSFTFPHLLKACSGLSHLQMGRFVHAQ 144
Query: 134 VTTLGFARHGPVRVGVVELYANCERMG--------------------------------- 160
V LGF V+ G++ LYA C R+G
Sbjct: 145 VFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPM 204
Query: 161 DAGKVFDEMRERDV------------------------------------IVWNLMIQ-- 182
+A ++F +MR+ DV I +L+I
Sbjct: 205 EALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLN 264
Query: 183 -GYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDA 241
Y K G++ T LF +M +++ WN MIS AK EA+ +F EM+ K PD
Sbjct: 265 TMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTI 324
Query: 242 TLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNE 301
++ + + CA++G+ + ++ Y + RD V + ++L+D + KCG+ + VF+
Sbjct: 325 SITSAISACAQVGSLEQARSMYEYVGRSDY-RDDVFISSALIDMFAKCGSVEGARLVFDR 383
Query: 302 MPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRG-VTPNDSTFVGVLACCAHAGLVDRG 360
R+VV W+AMI G +G + L+ M RG V PND TF+G+L C H+G+V G
Sbjct: 384 TLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREG 443
Query: 361 RELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACR 420
F+ MA ++ P+ +HY CV+DLLGR GH+ +A ++I+ MP++P +WGALLSAC+
Sbjct: 444 WWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACK 502
Query: 421 THGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQ 480
H E+ E AA++L +++P N+GH+V LSN+YA WD V +VRV M+E + K G
Sbjct: 503 KHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGC 562
Query: 481 S 481
S
Sbjct: 563 S 563
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 317 bits (811), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 175/478 (36%), Positives = 280/478 (58%), Gaps = 12/478 (2%)
Query: 11 RILSLLHGAKTRTQLTQIHAHFLRHGL--HHSNQILAHFISVCASLH-RVPYATRVFNHS 67
++ L+ +++ ++ QIHA LRH L H +L + + H ++ ++ +F+ +
Sbjct: 31 KLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQT 90
Query: 68 PNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLG 127
+P++ LF + I S++ Q F L+ + ++ I+P+ FTF SLLK+ S + G
Sbjct: 91 IDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSE-INPNEFTFSSLLKSCST----KSG 145
Query: 128 QSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKV 187
+ +H V G V G+V++YA + A KVFD M ER ++ MI Y K
Sbjct: 146 KLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQ 205
Query: 188 GELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGF-EPDDATLVTV 246
G +E LF M +R +VSWN+MI A+ +AL+LF+++L +G +PD+ T+V
Sbjct: 206 GNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAA 265
Query: 247 LPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRN 306
L C+++GA + G WIH + +R V V L+D Y KCG+ + + VFN+ P ++
Sbjct: 266 LSACSQIGALETGRWIHVFVKSSR-IRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKD 324
Query: 307 VVSWNAMISGMAYNGMGEVGVGLFEDM--VRGVTPNDSTFVGVLACCAHAGLVDRGRELF 364
+V+WNAMI+G A +G + + LF +M + G+ P D TF+G L CAHAGLV+ G +F
Sbjct: 325 IVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIF 384
Query: 365 DSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGD 424
+SM ++ + PK+EHYGC+V LLGR G ++ A + I++M M+ + LW ++L +C+ HGD
Sbjct: 385 ESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGD 444
Query: 425 REIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQSA 482
+ + A+ L+ + NSG +VLLSNIYA ++ V KVR LM+E I K PG S
Sbjct: 445 FVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGIST 502
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 315 bits (807), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 174/460 (37%), Positives = 269/460 (58%), Gaps = 9/460 (1%)
Query: 25 LTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSL 84
+ Q+HAH LR G+ + +L + + + YA ++F+H N L+N +I+A +
Sbjct: 4 IKQLHAHCLRTGVDETKDLLQRLLLI----PNLVYARKLFDHHQNSCTFLYNKLIQAYYV 59
Query: 85 SPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGP 144
+ L++L+ + + P + TF + A+++ + + LH+Q GF
Sbjct: 60 HHQPHESIVLYNLL-SFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSF 118
Query: 145 VRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRS 204
++ YA + A +VFDEM +RDV VWN MI GY + G+++ +ELF M ++
Sbjct: 119 CCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKN 178
Query: 205 VVSWNLMISCLAKGKKEEEALVLFREM-LEKGFEPDDATLVTVLPVCARLGAADVGEWIH 263
V SW +IS ++ EAL +F M +K +P+ T+V+VLP CA LG ++G +
Sbjct: 179 VTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLE 238
Query: 264 SYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEM-PMRNVVSWNAMISGMAYNGM 322
YA + GF D + V N+ ++ Y KCG +F E+ RN+ SWN+MI +A +G
Sbjct: 239 GYARENGFF-DNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGK 297
Query: 323 GEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYG 381
+ + LF M+R G P+ TFVG+L C H G+V +G+ELF SM ++ PKLEHYG
Sbjct: 298 HDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYG 357
Query: 382 CVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPW 441
C++DLLGR G ++EA DLI++MPM+P A +WG LL AC HG+ EIAEIA++ L +EP
Sbjct: 358 CMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPT 417
Query: 442 NSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
N G+ V++SNIYA +WD V ++R LM++ + K G S
Sbjct: 418 NPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYS 457
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 311 bits (797), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 176/504 (34%), Positives = 261/504 (51%), Gaps = 36/504 (7%)
Query: 13 LSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASL--HRVPYATRVFNHSPNP 70
LSLL+ K LTQIH F+++G+ + I CA +PYA R+ P P
Sbjct: 9 LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEP 68
Query: 71 NIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSL 130
+ +FN++++ S S +F M + PD F+F ++KA N R + G +
Sbjct: 69 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQM 128
Query: 131 HAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWN------------ 178
H Q G H V ++ +Y C + A KVFDEM + +++ WN
Sbjct: 129 HCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDV 188
Query: 179 -------------------LMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGK 219
+M+ GY K GELE+ +F M R VSW+ MI +A
Sbjct: 189 AGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNG 248
Query: 220 KEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVG 279
E+ + FRE+ G P++ +L VL C++ G+ + G+ +H + G+ IVSV
Sbjct: 249 SFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGY-SWIVSVN 307
Query: 280 NSLVDFYCKCGN-PQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGV 337
N+L+D Y +CGN P A L R +VSW +MI+G+A +G GE V LF +M GV
Sbjct: 308 NALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGV 367
Query: 338 TPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREAL 397
TP+ +F+ +L C+HAGL++ G + F M + + P++EHYGC+VDL GR G +++A
Sbjct: 368 TPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAY 427
Query: 398 DLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEM 457
D I MP+ PTA +W LL AC +HG+ E+AE + L ++P NSG VLLSN YA
Sbjct: 428 DFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAG 487
Query: 458 RWDEVEKVRVLMREGHIKKVPGQS 481
+W +V +R M IKK S
Sbjct: 488 KWKDVASIRKSMIVQRIKKTTAWS 511
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 308 bits (789), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 175/528 (33%), Positives = 267/528 (50%), Gaps = 69/528 (13%)
Query: 23 TQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKAC 82
Q+ Q+HA +R LH I IS + + A RVFN PN+ L NS+I+A
Sbjct: 33 NQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAH 92
Query: 83 SLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARH 142
+ + Q F +FS M+ + D FT+P LLKA S + + +H + LG +
Sbjct: 93 AQNSQPYQAFFVFSEMQRF-GLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSD 151
Query: 143 GPVRVGVVELYANCERMG---------------------------------DAGKVFDEM 169
V +++ Y+ C +G DA ++FDEM
Sbjct: 152 IYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEM 211
Query: 170 RERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFR 229
+RD+I WN M+ GY + E+ ELF +M +R+ VSW+ M+ +K E A V+F
Sbjct: 212 PQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFD 271
Query: 230 ---------------------------------EMLEKGFEPDDATLVTVLPVCARLGAA 256
+M+ G + D A ++++L C G
Sbjct: 272 KMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLL 331
Query: 257 DVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISG 316
+G IHS + L V N+L+D Y KCGN + VFN++P +++VSWN M+ G
Sbjct: 332 SLGMRIHSILK-RSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHG 390
Query: 317 MAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLP 375
+ +G G+ + LF M R G+ P+ TF+ VL C HAGL+D G + F SM + L+P
Sbjct: 391 LGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVP 450
Query: 376 KLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKEL 435
++EHYGC+VDLLGR G ++EA+ ++++MPMEP +WGALL ACR H + +IA+ L
Sbjct: 451 QVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNL 510
Query: 436 VNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQSAT 483
V ++P + G++ LLSNIYA W+ V +R M+ ++K G S+
Sbjct: 511 VKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSV 558
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 306 bits (784), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 162/485 (33%), Positives = 269/485 (55%), Gaps = 10/485 (2%)
Query: 6 QQIERRILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCA-SLHRVPYATRVF 64
Q + + I +++ ++ L Q+ + + GL HS+ + + C L + YA +F
Sbjct: 21 QLLNQFISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIF 80
Query: 65 NHSPNPNIILFNSIIKACSLSPPFQ--QCFHLFSLMRNARAISPDYFTFPSLLKAASNLR 122
+ PN L+ +++ A S S P F F LM N P++F +P +LK+ L
Sbjct: 81 DRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLS 140
Query: 123 DFQLGQSLHAQVTTLGFARHGPVRVGVVELYANC-ERMGDAGKVFDEMRERDVIVWNLMI 181
+H + GF + V+ ++ YA+ + A ++FDEM ER+V+ W M+
Sbjct: 141 SAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAML 200
Query: 182 QGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREML-EKGFEPDD 240
GY + G++ + LF M +R V SWN +++ + EA+ LFR M+ E P++
Sbjct: 201 SGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNE 260
Query: 241 ATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFN 300
T+V VL CA+ G + + IH++A + D+ V NSLVD Y KCGN + SVF
Sbjct: 261 VTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVF-VSNSLVDLYGKCGNLEEASSVFK 319
Query: 301 EMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR----GVTPNDSTFVGVLACCAHAGL 356
+++ +WN+MI+ A +G E + +FE+M++ + P+ TF+G+L C H GL
Sbjct: 320 MASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGL 379
Query: 357 VDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALL 416
V +GR FD M +F + P++EHYGC++DLLGR G EAL+++ +M M+ A+WG+LL
Sbjct: 380 VSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLL 439
Query: 417 SACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKK 476
+AC+ HG ++AE+A K LV + P N G+ +++N+Y E W+E + R +++ + K
Sbjct: 440 NACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYK 499
Query: 477 VPGQS 481
PG S
Sbjct: 500 PPGWS 504
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 306 bits (783), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 158/458 (34%), Positives = 266/458 (58%), Gaps = 4/458 (0%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
+++A G+ ++ +++ + + + + A R+F+ N+ L N++
Sbjct: 257 KVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQG 316
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
++ +F+LM ++ + PD + S + + S LR+ G+S H V GF +
Sbjct: 317 LTREALGVFNLMMDS-GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNIC 375
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
++++Y C R A ++FD M + V+ WN ++ GY + GE++ E F M ++++V
Sbjct: 376 NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIV 435
Query: 207 SWNLMISCLAKGKKEEEALVLFREML-EKGFEPDDATLVTVLPVCARLGAADVGEWIHSY 265
SWN +IS L +G EEA+ +F M ++G D T++++ C LGA D+ +WI+ Y
Sbjct: 436 SWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYY 495
Query: 266 ANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEV 325
G D V +G +LVD + +CG+P++ +S+FN + R+V +W A I MA G E
Sbjct: 496 IEKNGIQLD-VRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAER 554
Query: 326 GVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVV 384
+ LF+DM+ +G+ P+ FVG L C+H GLV +G+E+F SM + P+ HYGC+V
Sbjct: 555 AIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMV 614
Query: 385 DLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSG 444
DLLGR G + EA+ LI MPMEP +W +LL+ACR G+ E+A AA+++ + P +G
Sbjct: 615 DLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTG 674
Query: 445 HHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQSA 482
+VLLSN+YA RW+++ KVR+ M+E ++K PG S+
Sbjct: 675 SYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSS 712
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/448 (24%), Positives = 191/448 (42%), Gaps = 63/448 (14%)
Query: 14 SLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASL---HRVPYATRVFNHSPN- 69
S L KT +L H + GL + + ++ L + +A VF +S +
Sbjct: 37 SSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESY 96
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQS 129
++NS+I+ + S + LF M N+ ISPD +TFP L A + R G
Sbjct: 97 GTCFMYNSLIRGYASSGLCNEAILLFLRMMNS-GISPDKYTFPFGLSACAKSRAKGNGIQ 155
Query: 130 LHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGE 189
+H + +G+A+ V+ +V YA C + A KVFDEM ER+V+ W MI GY +
Sbjct: 156 IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 215
Query: 190 LETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPV 249
+ ++LF RM ++EE P+ T+V V+
Sbjct: 216 AKDAVDLFFRM------------------VRDEEV------------TPNSVTMVCVISA 245
Query: 250 CARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVS 309
CA+L + GE ++++ + G + + V ++LVD Y KC +F+E N+
Sbjct: 246 CAKLEDLETGEKVYAFIRNSGIEVNDLMV-SALVDMYMKCNAIDVAKRLFDEYGASNLDL 304
Query: 310 WNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCA-----------HAGLV 357
NAM S G+ +G+F M+ GV P+ + + ++ C+ H ++
Sbjct: 305 CNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVL 364
Query: 358 DRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLS 417
G E +D++ ++D+ +C A + M T W ++++
Sbjct: 365 RNGFESWDNIC------------NALIDMYMKCHRQDTAFRIFDRMS-NKTVVTWNSIVA 411
Query: 418 ACRTHGDREIAEIAAKEL--VNVEPWNS 443
+G+ + A + + N+ WN+
Sbjct: 412 GYVENGEVDAAWETFETMPEKNIVSWNT 439
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/435 (22%), Positives = 171/435 (39%), Gaps = 74/435 (17%)
Query: 13 LSLLHGAKTRTQLTQIHAHFLRHGLHHS---NQILAHFISVCASLHRVPYATRVFNHSPN 69
LS ++ + QIH ++ G L HF + C L A +VF+
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDS---ARKVFDEMSE 197
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQS 129
N++ + S+I + + LF M ++P+ T ++ A + L D + G+
Sbjct: 198 RNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEK 257
Query: 130 LHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGE 189
++A + G + + +V++Y C + A ++FDE ++ + N M Y + G
Sbjct: 258 VYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQG- 316
Query: 190 LETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPV 249
L R EAL +F M++ G PD ++++ +
Sbjct: 317 ------LTR------------------------EALGVFNLMMDSGVRPDRISMLSAISS 346
Query: 250 CARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKC-------------------- 289
C++L G+ H Y GF ++ N+L+D Y KC
Sbjct: 347 CSQLRNILWGKSCHGYVLRNGF-ESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVT 405
Query: 290 -----------GNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM--VRG 336
G A F MP +N+VSWN +ISG+ + E + +F M G
Sbjct: 406 WNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEG 465
Query: 337 VTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVK-FQLLPKLEHYGCVVDLLGRCGHVRE 395
V + T + + + C H G +D + ++ + QL +L +VD+ RCG
Sbjct: 466 VNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGT--TLVDMFSRCGDPES 523
Query: 396 ALDLIRSMPMEPTAA 410
A+ + S+ +A
Sbjct: 524 AMSIFNSLTNRDVSA 538
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 305 bits (782), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 158/458 (34%), Positives = 266/458 (58%), Gaps = 4/458 (0%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
+++A G+ ++ +++ + + + + A R+F+ N+ L N++
Sbjct: 257 KVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQG 316
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
++ +F+LM ++ + PD + S + + S LR+ G+S H V GF +
Sbjct: 317 LTREALGVFNLMMDS-GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNIC 375
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
++++Y C R A ++FD M + V+ WN ++ GY + GE++ E F M ++++V
Sbjct: 376 NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIV 435
Query: 207 SWNLMISCLAKGKKEEEALVLFREML-EKGFEPDDATLVTVLPVCARLGAADVGEWIHSY 265
SWN +IS L +G EEA+ +F M ++G D T++++ C LGA D+ +WI+ Y
Sbjct: 436 SWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYY 495
Query: 266 ANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEV 325
G D V +G +LVD + +CG+P++ +S+FN + R+V +W A I MA G E
Sbjct: 496 IEKNGIQLD-VRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAER 554
Query: 326 GVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVV 384
+ LF+DM+ +G+ P+ FVG L C+H GLV +G+E+F SM + P+ HYGC+V
Sbjct: 555 AIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMV 614
Query: 385 DLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSG 444
DLLGR G + EA+ LI MPMEP +W +LL+ACR G+ E+A AA+++ + P +G
Sbjct: 615 DLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTG 674
Query: 445 HHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQSA 482
+VLLSN+YA RW+++ KVR+ M+E ++K PG S+
Sbjct: 675 SYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSS 712
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 108/448 (24%), Positives = 191/448 (42%), Gaps = 63/448 (14%)
Query: 14 SLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASL---HRVPYATRVFNHSPN- 69
S L KT +L H + GL + + ++ L + +A VF +S +
Sbjct: 37 SSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESY 96
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQS 129
++NS+I+ + S + LF M N+ ISPD +TFP L A + R G
Sbjct: 97 GTCFMYNSLIRGYASSGLCNEAILLFLRMMNS-GISPDKYTFPFGLSACAKSRAKGNGIQ 155
Query: 130 LHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGE 189
+H + +G+A+ V+ +V YA C + A KVFDEM ER+V+ W MI GY +
Sbjct: 156 IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 215
Query: 190 LETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPV 249
+ ++LF RM ++EE P+ T+V V+
Sbjct: 216 AKDAVDLFFRM------------------VRDEEV------------TPNSVTMVCVISA 245
Query: 250 CARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVS 309
CA+L + GE ++++ + G + + V ++LVD Y KC +F+E N+
Sbjct: 246 CAKLEDLETGEKVYAFIRNSGIEVNDLMV-SALVDMYMKCNAIDVAKRLFDEYGASNLDL 304
Query: 310 WNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCA-----------HAGLV 357
NAM S G+ +G+F M+ GV P+ + + ++ C+ H ++
Sbjct: 305 CNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVL 364
Query: 358 DRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLS 417
G E +D++ ++D+ +C A + M T W ++++
Sbjct: 365 RNGFESWDNIC------------NALIDMYMKCHRQDTAFRIFDRMS-NKTVVTWNSIVA 411
Query: 418 ACRTHGDREIAEIAAKEL--VNVEPWNS 443
+G+ + A + + N+ WN+
Sbjct: 412 GYVENGEVDAAWETFETMPEKNIVSWNT 439
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/435 (22%), Positives = 171/435 (39%), Gaps = 74/435 (17%)
Query: 13 LSLLHGAKTRTQLTQIHAHFLRHGLHHS---NQILAHFISVCASLHRVPYATRVFNHSPN 69
LS ++ + QIH ++ G L HF + C L A +VF+
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDS---ARKVFDEMSE 197
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQS 129
N++ + S+I + + LF M ++P+ T ++ A + L D + G+
Sbjct: 198 RNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEK 257
Query: 130 LHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGE 189
++A + G + + +V++Y C + A ++FDE ++ + N M Y + G
Sbjct: 258 VYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQG- 316
Query: 190 LETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPV 249
L R EAL +F M++ G PD ++++ +
Sbjct: 317 ------LTR------------------------EALGVFNLMMDSGVRPDRISMLSAISS 346
Query: 250 CARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKC-------------------- 289
C++L G+ H Y GF ++ N+L+D Y KC
Sbjct: 347 CSQLRNILWGKSCHGYVLRNGF-ESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVT 405
Query: 290 -----------GNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM--VRG 336
G A F MP +N+VSWN +ISG+ + E + +F M G
Sbjct: 406 WNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEG 465
Query: 337 VTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVK-FQLLPKLEHYGCVVDLLGRCGHVRE 395
V + T + + + C H G +D + ++ + QL +L +VD+ RCG
Sbjct: 466 VNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGT--TLVDMFSRCGDPES 523
Query: 396 ALDLIRSMPMEPTAA 410
A+ + S+ +A
Sbjct: 524 AMSIFNSLTNRDVSA 538
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 303 bits (776), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 161/458 (35%), Positives = 257/458 (56%), Gaps = 7/458 (1%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
++H H ++ GL + + + + + + A VF+ ++ +N +I +
Sbjct: 156 KLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMK 215
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
+++ L M +SP T +L A S ++D L + +H V+ +
Sbjct: 216 EYEESIELLVEMER-NLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLE 274
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
+V YA C M A ++F M+ RDVI W +++GY + G L+ F +M R +
Sbjct: 275 NALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRI 334
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA 266
SW +MI + E+L +FREM G PD+ T+V+VL CA LG+ ++GEWI +Y
Sbjct: 335 SWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYI 394
Query: 267 NDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVG 326
DK +++ V VGN+L+D Y KCG + VF++M R+ +W AM+ G+A NG G+
Sbjct: 395 -DKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEA 453
Query: 327 VGLF---EDMVRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCV 383
+ +F +DM + P+D T++GVL+ C H+G+VD+ R+ F M ++ P L HYGC+
Sbjct: 454 IKVFFQMQDM--SIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCM 511
Query: 384 VDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNS 443
VD+LGR G V+EA +++R MPM P + +WGALL A R H D +AE+AAK+++ +EP N
Sbjct: 512 VDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNG 571
Query: 444 GHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
+ LL NIYA RW ++ +VR + + IKK PG S
Sbjct: 572 AVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFS 609
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 197/427 (46%), Gaps = 28/427 (6%)
Query: 11 RILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAH-FISVCASLH-RVPYATRVFNHSP 68
R +S+L KT Q Q+H+ + G+ + F+ C+ L V YA ++F P
Sbjct: 36 RFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIP 95
Query: 69 NPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRD---FQ 125
P+++++N++IK S + L+ M ++PD TFP LL RD
Sbjct: 96 EPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLK-EGVTPDSHTFPFLLNGLK--RDGGALA 152
Query: 126 LGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYC 185
G+ LH V G + V+ +V++Y+ C M A VFD + DV WNLMI GY
Sbjct: 153 CGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYN 212
Query: 186 KVGELETGLELFRRMGDRSVVSWN-----LMISCLAKGKKEEEALVLFREMLEKGFEPD- 239
++ E E +EL M +R++VS L++S +K K ++ + + E EP
Sbjct: 213 RMKEYEESIELLVEM-ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSL 271
Query: 240 --DATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLS 297
+ LV C + A + + + K RD++S S+V Y + GN + +
Sbjct: 272 RLENALVNAYAACGEMDIA-----VRIFRSMKA--RDVIS-WTSIVKGYVERGNLKLART 323
Query: 298 VFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGL 356
F++MP+R+ +SW MI G G + +F +M G+ P++ T V VL CAH G
Sbjct: 324 YFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGS 383
Query: 357 VDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALL 416
++ G E + K ++ + ++D+ +CG +A + M W A++
Sbjct: 384 LEIG-EWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFT-WTAMV 441
Query: 417 SACRTHG 423
+G
Sbjct: 442 VGLANNG 448
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 303 bits (775), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 166/473 (35%), Positives = 266/473 (56%), Gaps = 5/473 (1%)
Query: 13 LSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCA-SLHR-VPYATRVFNHSPNP 70
++LL T ++ QIHA G + ++ HF+ A S H+ + YA ++ + S P
Sbjct: 10 IALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKP 69
Query: 71 NIILFNSIIKACSLSPPFQQCFHLFS-LMRNARAISPDYFTFPSLLKAASNLRDFQLGQS 129
+ NS+I+A SP ++ F + ++ + + PD +T L++A + LR + G
Sbjct: 70 TLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQ 129
Query: 130 LHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGE 189
+H GF V+ G++ LYA + KVF+ + D + M+ + G+
Sbjct: 130 VHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGD 189
Query: 190 LETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPV 249
+ +LF M +R ++WN MIS A+ + EAL +F M +G + + +++VL
Sbjct: 190 VVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSA 249
Query: 250 CARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVS 309
C +LGA D G W HSY ++ ++ V + +LVD Y KCG+ + + VF M +NV +
Sbjct: 250 CTQLGALDQGRWAHSYI-ERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYT 308
Query: 310 WNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMA 368
W++ ++G+A NG GE + LF M + GVTPN TFV VL C+ G VD G+ FDSM
Sbjct: 309 WSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMR 368
Query: 369 VKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIA 428
+F + P+LEHYGC+VDL R G + +A+ +I+ MPM+P AA+W +LL A R + + E+
Sbjct: 369 NEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELG 428
Query: 429 EIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
+A+K+++ +E N G +VLLSNIYA+ WD V VR M+ ++K PG S
Sbjct: 429 VLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCS 481
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 302 bits (774), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 169/477 (35%), Positives = 257/477 (53%), Gaps = 8/477 (1%)
Query: 12 ILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPN 71
+LS G + Q+H+ + I + + + + V A RVF+ + N
Sbjct: 158 VLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRN 217
Query: 72 IILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLH 131
++ +NS+I + P + +F +M +R + PD T S++ A ++L ++GQ +H
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESR-VEPDEVTLASVISACASLSAIKVGQEVH 276
Query: 132 AQVTTLGFARHGPV-RVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGEL 190
+V R+ + V++YA C R+ +A +FD M R+VI MI GY
Sbjct: 277 GRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAAST 336
Query: 191 ETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVC 250
+ +F +M +R+VVSWN +I+ + + EEAL LF + + P + +L C
Sbjct: 337 KAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKAC 396
Query: 251 ARLGAADVGEWIHSYANDKGFL-----RDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR 305
A L +G H + GF D + VGNSL+D Y KCG + G VF +M R
Sbjct: 397 ADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER 456
Query: 306 NVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELF 364
+ VSWNAMI G A NG G + LF +M+ G P+ T +GVL+ C HAG V+ GR F
Sbjct: 457 DCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYF 516
Query: 365 DSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGD 424
SM F + P +HY C+VDLLGR G + EA +I MPM+P + +WG+LL+AC+ H +
Sbjct: 517 SSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRN 576
Query: 425 REIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
+ + A++L+ VEP NSG +VLLSN+YAE +W++V VR MR+ + K PG S
Sbjct: 577 ITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCS 633
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 165/319 (51%), Gaps = 9/319 (2%)
Query: 130 LHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGE 189
+HA V GF+ ++ +++ Y+ C + D +VFD+M +R++ WN ++ G K+G
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 190 LETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPV 249
L+ LFR M +R +WN M+S A+ + EEAL F M ++GF ++ + +VL
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 250 CARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVS 309
C+ L + G +HS FL D V +G++LVD Y KCGN VF+EM RNVVS
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSD-VYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVS 220
Query: 310 WNAMISGMAYNGMGEVGVGLFEDMVRG-VTPNDSTFVGVLACCAHAGLVDRGRELFDSMA 368
WN++I+ NG + +F+ M+ V P++ T V++ CA + G+E+ +
Sbjct: 221 WNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVV 280
Query: 369 VKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPME----PTAALWGALLSACRTHGD 424
+L + VD+ +C ++EA + SMP+ T+ + G ++A
Sbjct: 281 KNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAAR 340
Query: 425 REIAEIAAKELVNVEPWNS 443
++A + NV WN+
Sbjct: 341 LMFTKMAER---NVVSWNA 356
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/457 (25%), Positives = 183/457 (40%), Gaps = 101/457 (22%)
Query: 28 IHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSII-------- 79
+HA ++ G + I I + + +VF+ P NI +NS++
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 80 --KACSL---SPPFQQC------------------FHLFSLMRNARAISPDYFTFPSLLK 116
+A SL P QC F++M + +Y +F S+L
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEY-SFASVLS 160
Query: 117 AASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIV 176
A S L D G +H+ + F + +V++Y+ C + DA +VFDEM +R+V+
Sbjct: 161 ACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVS 220
Query: 177 WNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGF 236
W N +I+C + EAL +F+ MLE
Sbjct: 221 W-------------------------------NSLITCFEQNGPAVEALDVFQMMLESRV 249
Query: 237 EPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGL 296
EPD+ TL +V+ CA L A VG+ +H LR+ + + N+ VD Y KC +
Sbjct: 250 EPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEAR 309
Query: 297 SVFNEMPM-------------------------------RNVVSWNAMISGMAYNGMGEV 325
+F+ MP+ RNVVSWNA+I+G NG E
Sbjct: 310 FIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEE 369
Query: 326 GVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSM---AVKFQLLPKLEHY- 380
+ LF + R V P +F +L CA + G + + KFQ + + +
Sbjct: 370 ALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFV 429
Query: 381 -GCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALL 416
++D+ +CG V E + R M ME W A++
Sbjct: 430 GNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMI 465
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 174/512 (33%), Positives = 276/512 (53%), Gaps = 44/512 (8%)
Query: 10 RRILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVP----YATRVFN 65
RR L K L QIHA + +GL + ++ I ASL VP YA ++F+
Sbjct: 13 RRRPKLWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELI-YSASLS-VPGALKYAHKLFD 70
Query: 66 HSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQ 125
P P++ + N +++ + S ++ L++ M R +SPD +TF +LKA S L
Sbjct: 71 EIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEK-RGVSPDRYTFTFVLKACSKLEWRS 129
Query: 126 LGQSLHAQVTTLGFARHGPVRVGVVELYANCERMG------------------------- 160
G + H +V GF + V+ ++ +ANC +G
Sbjct: 130 NGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYA 189
Query: 161 ------DAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISC 214
+A ++FDEM +D + WN+MI G K E+++ ELF R ++ VV+WN MIS
Sbjct: 190 KRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISG 249
Query: 215 LAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRD 274
+EAL +F+EM + G PD T++++L CA LG + G+ +H Y + +
Sbjct: 250 YVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSS 309
Query: 275 IVSVG----NSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLF 330
+ VG N+L+D Y KCG+ + VF + R++ +WN +I G+A + E + +F
Sbjct: 310 SIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMF 368
Query: 331 EDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGR 389
E+M R V PN+ TF+GV+ C+H+G VD GR+ F M + + P ++HYGC+VD+LGR
Sbjct: 369 EEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGR 428
Query: 390 CGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLL 449
G + EA + SM +EP A +W LL AC+ +G+ E+ + A ++L+++ SG +VLL
Sbjct: 429 AGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLL 488
Query: 450 SNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
SNIYA +WD V+KVR + + +KK G S
Sbjct: 489 SNIYASTGQWDGVQKVRKMFDDTRVKKPTGVS 520
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 299 bits (765), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 165/419 (39%), Positives = 242/419 (57%), Gaps = 13/419 (3%)
Query: 74 LFNSIIKACS---LSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSL 130
L+N II+A SP ++ MRN R +SPD+ TFP LL + N LGQ
Sbjct: 26 LWNIIIRAIVHNVSSPQRHSPISVYLRMRNHR-VSPDFHTFPFLLPSFHNPLHLPLGQRT 84
Query: 131 HAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGEL 190
HAQ+ G + VR ++ +Y++C + A +VFD+ +D+ WN ++ Y K G +
Sbjct: 85 HAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLI 144
Query: 191 ETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREML-----EKGFEPDDATLVT 245
+ +LF M +R+V+SW+ +I+ K +EAL LFREM E P++ T+ T
Sbjct: 145 DDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMST 204
Query: 246 VLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEM-PM 304
VL C RLGA + G+W+H+Y + DIV +G +L+D Y KCG+ + VFN +
Sbjct: 205 VLSACGRLGALEQGKWVHAYIDKYHVEIDIV-LGTALIDMYAKCGSLERAKRVFNALGSK 263
Query: 305 RNVVSWNAMISGMAYNGMGEVGVGLFEDMVRG--VTPNDSTFVGVLACCAHAGLVDRGRE 362
++V +++AMI +A G+ + LF +M + PN TFVG+L C H GL++ G+
Sbjct: 264 KDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKS 323
Query: 363 LFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTH 422
F M +F + P ++HYGC+VDL GR G ++EA I SMPMEP +WG+LLS R
Sbjct: 324 YFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRML 383
Query: 423 GDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
GD + E A K L+ ++P NSG +VLLSN+YA+ RW EV+ +R M I KVPG S
Sbjct: 384 GDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCS 442
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 127/306 (41%), Gaps = 25/306 (8%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
+ HA L GL + +++ +S + A RVF+ S + ++ +NS++ A + +
Sbjct: 83 RTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAG 142
Query: 87 PFQQCFHLFSLMRNARAIS-----PDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFAR 141
LF M IS Y +A R+ QL + A F R
Sbjct: 143 LIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEA------FVR 196
Query: 142 HGPVRVGVVELYANCERMG--DAGK----VFDEMR-ERDVIVWNLMIQGYCKVGELETGL 194
P + + + C R+G + GK D+ E D+++ +I Y K G LE
Sbjct: 197 --PNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAK 254
Query: 195 ELFRRMGD-RSVVSWNLMISCLAKGKKEEEALVLFREM-LEKGFEPDDATLVTVLPVCAR 252
+F +G + V +++ MI CLA +E LF EM P+ T V +L C
Sbjct: 255 RVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVH 314
Query: 253 LGAADVGE-WIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR-NVVSW 310
G + G+ + + G I G +VD Y + G + S MPM +V+ W
Sbjct: 315 RGLINEGKSYFKMMIEEFGITPSIQHYG-CMVDLYGRSGLIKEAESFIASMPMEPDVLIW 373
Query: 311 NAMISG 316
+++SG
Sbjct: 374 GSLLSG 379
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 169/465 (36%), Positives = 263/465 (56%), Gaps = 4/465 (0%)
Query: 21 TRTQLTQIHAHFLRHGLHHSNQILAHFISVC-ASLHRVPYATRVFNHSPNPNIILFNSII 79
T +L QIHA ++ GL + ++ C AS + YA VF + N ++N+II
Sbjct: 37 TMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTII 96
Query: 80 KACSLSPPFQQCFHLF-SLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLG 138
+ S S + +F ++ ++ ++ P T+PS+ KA L + G+ LH V G
Sbjct: 97 RGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEG 156
Query: 139 FARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFR 198
+R ++ +Y C + +A ++F M DV+ WN MI G+ K G ++ LF
Sbjct: 157 LEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFD 216
Query: 199 RMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADV 258
M R+ VSWN MIS + + ++AL +FREM EK +PD T+V++L CA LGA++
Sbjct: 217 EMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQ 276
Query: 259 GEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMA 318
G WIH Y F + + V +L+D YCKCG + GL+VF P + + WN+MI G+A
Sbjct: 277 GRWIHEYIVRNRFELNSIVV-TALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLA 335
Query: 319 YNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKL 377
NG E + LF ++ R G+ P+ +F+GVL CAH+G V R E F M K+ + P +
Sbjct: 336 NNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSI 395
Query: 378 EHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVN 437
+HY +V++LG G + EA LI++MP+E +W +LLSACR G+ E+A+ AAK L
Sbjct: 396 KHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKK 455
Query: 438 VEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQSA 482
++P + +VLLSN YA ++E + R+LM+E ++K G S+
Sbjct: 456 LDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSS 500
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 154/436 (35%), Positives = 251/436 (57%), Gaps = 3/436 (0%)
Query: 47 FISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISP 106
F+ + AS R+ YA VF+ + +++ +N++I+ + F LF M+++ + P
Sbjct: 152 FMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVM-P 210
Query: 107 DYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVF 166
D +++ A + + ++++ + + +V +YA M A + F
Sbjct: 211 DEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFF 270
Query: 167 DEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALV 226
+M R++ V M+ GY K G L+ +F + + +V W MIS + +EAL
Sbjct: 271 RKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALR 330
Query: 227 LFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFY 286
+F EM G +PD ++ +V+ CA LG D +W+HS + G L +S+ N+L++ Y
Sbjct: 331 VFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNG-LESELSINNALINMY 389
Query: 287 CKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFV 345
KCG A VF +MP RNVVSW++MI+ ++ +G + LF M + V PN+ TFV
Sbjct: 390 AKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFV 449
Query: 346 GVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPM 405
GVL C+H+GLV+ G+++F SM ++ + PKLEHYGC+VDL GR +REAL++I SMP+
Sbjct: 450 GVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPV 509
Query: 406 EPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKV 465
+WG+L+SACR HG+ E+ + AAK ++ +EP + G VL+SNIYA E RW++V +
Sbjct: 510 ASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNI 569
Query: 466 RVLMREGHIKKVPGQS 481
R +M E ++ K G S
Sbjct: 570 RRVMEEKNVFKEKGLS 585
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 113/442 (25%), Positives = 203/442 (45%), Gaps = 26/442 (5%)
Query: 12 ILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNP- 70
IL L K+ + Q+HAH LR ++H +SV +S + YA VF+ P+P
Sbjct: 15 ILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSPP 74
Query: 71 NIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSL 130
I+FN ++ S S + + +R+ D F+F +LKA S + G L
Sbjct: 75 ESIVFNPFLRDLSRSSEPRATILFYQRIRHVGG-RLDQFSFLPILKAVSKVSALFEGMEL 133
Query: 131 HAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGEL 190
H + V G +++YA+C R+ A VFDEM RDV+ WN MI+ YC+ G +
Sbjct: 134 HGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLV 193
Query: 191 ETGLELFRRMGDRSV-----VSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVT 245
+ +LF M D +V + N++ +C G ++ ++E D L
Sbjct: 194 DEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNR-AIYEFLIENDVRMDTHLLTA 252
Query: 246 VLPVCARLGAADVGEWIHSYANDKGFLRDI----VSVGNSLVDFYCKCGNPQAGLSVFNE 301
++ + A G D+ + F R + + V ++V Y KCG +F++
Sbjct: 253 LVTMYAGAGCMDMA---------REFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQ 303
Query: 302 MPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVDRG 360
+++V W MIS + + + +FE+M G+ P+ + V++ CA+ G++D+
Sbjct: 304 TEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKA 363
Query: 361 RELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACR 420
+ + + V L +L ++++ +CG + D+ MP + W ++++A
Sbjct: 364 KWVHSCIHVN-GLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVS-WSSMINALS 421
Query: 421 THGDRE--IAEIAAKELVNVEP 440
HG+ ++ A + NVEP
Sbjct: 422 MHGEASDALSLFARMKQENVEP 443
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 295 bits (756), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 173/487 (35%), Positives = 253/487 (51%), Gaps = 21/487 (4%)
Query: 15 LLHGAKTRTQLTQIHAHFLRHGL----HHSNQILAHFI--------SVCASLHRVPYATR 62
LL +T L Q HA F+ G N + A+ + S AS V YAT
Sbjct: 10 LLKLCRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATS 69
Query: 63 VFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLR 122
VF NP+ FN+II+ C+L P F + R++ PD+ TFP + KA + +
Sbjct: 70 VFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKK 129
Query: 123 --DFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLM 180
D L ++LH Q G ++ +Y+ + A ++FDE +RDV+ +N++
Sbjct: 130 NGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVL 189
Query: 181 IQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDD 240
I G K E+ ELF M R +VSWN +IS A+ EA+ LF EM+ G +PD+
Sbjct: 190 IDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDN 249
Query: 241 ATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFN 300
+V+ L CA+ G G+ IH Y K D + LVDFY KCG + +F
Sbjct: 250 VAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSF-LATGLVDFYAKCGFIDTAMEIFE 308
Query: 301 EMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDR 359
+ + +WNAMI+G+A +G GE+ V F MV G+ P+ TF+ VL C+H+GLVD
Sbjct: 309 LCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDE 368
Query: 360 GRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPME----PTAALWGAL 415
R LFD M + + +++HYGC+ DLLGR G + EA ++I MP + W L
Sbjct: 369 ARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGL 428
Query: 416 LSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVR-VLMREGHI 474
L CR HG+ EIAE AA + + P + G + ++ +YA RW+EV KVR ++ R+ +
Sbjct: 429 LGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKV 488
Query: 475 KKVPGQS 481
KK G S
Sbjct: 489 KKNVGFS 495
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 295 bits (754), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 175/514 (34%), Positives = 257/514 (50%), Gaps = 67/514 (13%)
Query: 33 LRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPN-PNIILFNSIIKACSLSPPFQQC 91
LRH + + QI F+ + AS + YA ++F+ P + L NS+IKA + +
Sbjct: 2 LRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDS 61
Query: 92 FHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQV----------------- 134
F L+ +R +PD FTF +L K+ S G LH+Q+
Sbjct: 62 FALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVD 121
Query: 135 -----TTLGFARH------------------GPVRVGVVEL------------------- 152
+G AR+ G +R G ++L
Sbjct: 122 MYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNA 181
Query: 153 ----YANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSW 208
+ M A ++FDEM + VI W MI GYC + +++ +LF M +R++VSW
Sbjct: 182 MMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSW 241
Query: 209 NLMISCLAKGKKEEEALVLFREM-LEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYAN 267
N MI + K+ +E + LF+EM +PDD T+++VLP + GA +GEW H +
Sbjct: 242 NTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQ 301
Query: 268 DKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGV 327
K L V V +++D Y KCG + +F+EMP + V SWNAMI G A NG +
Sbjct: 302 RKK-LDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAAL 360
Query: 328 GLFEDMVRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLL 387
LF M+ P++ T + V+ C H GLV+ GR+ F M + L K+EHYGC+VDLL
Sbjct: 361 DLFVTMMIEEKPDEITMLAVITACNHGGLVEEGRKWFHVMR-EMGLNAKIEHYGCMVDLL 419
Query: 388 GRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGHHV 447
GR G ++EA DLI +MP EP + + LSAC + D E AE K+ V +EP N G++V
Sbjct: 420 GRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYV 479
Query: 448 LLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
LL N+YA + RWD+ V+ +MR+ KK G S
Sbjct: 480 LLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCS 513
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 294 bits (753), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 178/491 (36%), Positives = 259/491 (52%), Gaps = 51/491 (10%)
Query: 10 RRILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQIL---AHFISVCASLHRVPYATRVFNH 66
+RI SL +QL Q+HA LR L + + +S V YA RVF+
Sbjct: 49 QRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDS 108
Query: 67 SPNPNIILFNSIIKACSLS-PPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQ 125
N + ++N++I+AC+ ++ F L+ M SPD TFP +LKA + + F
Sbjct: 109 IENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFS 168
Query: 126 LGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYC 185
G+ +H Q+ GF V G++ LY +C
Sbjct: 169 EGKQVHCQIVKHGFGGDVYVNNGLIHLYGSC----------------------------- 199
Query: 186 KVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVT 245
G L+ ++F M +RS+VSWN MI L + + + AL LFREM ++ FEPD T+ +
Sbjct: 200 --GCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREM-QRSFEPDGYTMQS 256
Query: 246 VLPVCARLGAADVGEWIHSY---ANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEM 302
VL CA LG+ +G W H++ D D++ V NSL++ YCKCG+ + VF M
Sbjct: 257 VLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVL-VKNSLIEMYCKCGSLRMAEQVFQGM 315
Query: 303 PMRNVVSWNAMISGMAYNGMGEVGVGLFEDMV---RGVTPNDSTFVGVLACCAHAGLVDR 359
R++ SWNAMI G A +G E + F+ MV V PN TFVG+L C H G V++
Sbjct: 316 QKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNK 375
Query: 360 GRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSAC 419
GR+ FD M + + P LEHYGC+VDL+ R G++ EA+D++ SMPM+P A +W +LL AC
Sbjct: 376 GRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDAC 435
Query: 420 RTHGDR-EIAEIAAKELVNVEPWN-------SGHHVLLSNIYAEEMRWDEVEKVRVLMRE 471
G E++E A+ ++ + N SG +VLLS +YA RW++V VR LM E
Sbjct: 436 CKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSE 495
Query: 472 GHIKKVPGQSA 482
I+K PG S+
Sbjct: 496 HGIRKEPGCSS 506
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 161/464 (34%), Positives = 248/464 (53%), Gaps = 40/464 (8%)
Query: 24 QLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACS 83
QL Q+HAH + G S +L I++ S + Y +F P P+ LFNS+IK+ S
Sbjct: 24 QLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTS 83
Query: 84 -LSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARH 142
L P C + M ++ +SP +TF S++K+ ++L ++G+ +H GF
Sbjct: 84 KLRLPLH-CVAYYRRMLSSN-VSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLD 141
Query: 143 GPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGD 202
V+ +V Y+ C G++E ++F RM +
Sbjct: 142 TYVQAALVTFYSKC-------------------------------GDMEGARQVFDRMPE 170
Query: 203 RSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWI 262
+S+V+WN ++S + +EA+ +F +M E GFEPD AT V++L CA+ GA +G W+
Sbjct: 171 KSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWV 230
Query: 263 HSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGM 322
H Y +G + V +G +L++ Y +CG+ VF++M NV +W AMIS +G
Sbjct: 231 HQYIISEGLDLN-VKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGY 289
Query: 323 GEVGVGLFEDMVR--GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHY 380
G+ V LF M G PN+ TFV VL+ CAHAGLV+ GR ++ M ++L+P +EH+
Sbjct: 290 GQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHH 349
Query: 381 GCVVDLLGRCGHVREALDLIRSMPMEPTA---ALWGALLSACRTHGDREIAEIAAKELVN 437
C+VD+LGR G + EA I + A ALW A+L AC+ H + ++ AK L+
Sbjct: 350 VCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIA 409
Query: 438 VEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
+EP N GHHV+LSNIYA + DEV +R M +++K G S
Sbjct: 410 LEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYS 453
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 292 bits (748), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 163/474 (34%), Positives = 252/474 (53%), Gaps = 44/474 (9%)
Query: 21 TRTQLTQIHAHFLRHGLHHS----NQILAHFISVCASLHRVPYATRVFNHSPNPNIILFN 76
T Q+ H+ F+ HGLH + +++L F+ + YA+ +F+ PN +++
Sbjct: 23 TVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYD 82
Query: 77 SIIKACSLS--PPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQV 134
++I+ CS S P + L + I+P Y TF L+ A F +G+ +H V
Sbjct: 83 TMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWV 142
Query: 135 TTLG-FARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETG 193
G F V+ GV+ +Y + + DA KVFDE+ + DV+ W++++ GY + G G
Sbjct: 143 VKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEG 202
Query: 194 LELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARL 253
LE +FREML KG EPD+ ++ T L CA++
Sbjct: 203 LE-------------------------------VFREMLVKGLEPDEFSVTTALTACAQV 231
Query: 254 GAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAM 313
GA G+WIH + K ++ V VG +LVD Y KCG + + VF ++ RNV SW A+
Sbjct: 232 GALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAAL 291
Query: 314 ISGMAYNGMGEVGVGLFEDMVR--GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKF 371
I G A G + + E + R G+ P+ +GVLA CAH G ++ GR + ++M ++
Sbjct: 292 IGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARY 351
Query: 372 QLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIA 431
++ PK EHY C+VDL+ R G + +AL+LI MPM+P A++WGALL+ CRTH + E+ E+A
Sbjct: 352 EITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELA 411
Query: 432 AKELVNVEPWNSGHH----VLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
K L+++E N V LSNIY R E KVR ++ + ++K PG S
Sbjct: 412 VKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWS 465
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 292 bits (747), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 168/480 (35%), Positives = 258/480 (53%), Gaps = 42/480 (8%)
Query: 12 ILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVP----YATRVFNHS 67
+LSL+ + + L QIHA LR L ++ + HF+S A L +P Y+ RVF+
Sbjct: 14 LLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLA-LSLIPRDINYSCRVFSQR 72
Query: 68 PNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLG 127
NP + N++I+A SLS + F LF +R ++ + + LK D G
Sbjct: 73 LNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGG 132
Query: 128 QSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKV 187
+H ++ + GF + +++LY+ CE DA KVFDE+ +RD
Sbjct: 133 LQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDT------------- 179
Query: 188 GELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREM---LEKGFEPDDATLV 244
VSWN++ SC + K+ + LVLF +M ++ +PD T +
Sbjct: 180 ------------------VSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCL 221
Query: 245 TVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPM 304
L CA LGA D G+ +H + ++ G L +++ N+LV Y +CG+ VF M
Sbjct: 222 LALQACANLGALDFGKQVHDFIDENG-LSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRE 280
Query: 305 RNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGREL 363
RNVVSW A+ISG+A NG G+ + F +M++ G++P + T G+L+ C+H+GLV G
Sbjct: 281 RNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMF 340
Query: 364 FDSM-AVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTH 422
FD M + +F++ P L HYGCVVDLLGR + +A LI+SM M+P + +W LL ACR H
Sbjct: 341 FDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVH 400
Query: 423 GDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQSA 482
GD E+ E L+ ++ +G +VLL N Y+ +W++V ++R LM+E I PG SA
Sbjct: 401 GDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSA 460
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 290 bits (741), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 146/425 (34%), Positives = 237/425 (55%), Gaps = 4/425 (0%)
Query: 60 ATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAAS 119
A +VF +++ +NS+I + LF M + + + T +L A +
Sbjct: 185 ACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME-SEDVKASHVTMVGVLSACA 243
Query: 120 NLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNL 179
+R+ + G+ + + + + + ++++Y C + DA ++FD M E+D + W
Sbjct: 244 KIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTT 303
Query: 180 MIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREM-LEKGFEP 238
M+ GY + E E+ M + +V+WN +IS + K EAL++F E+ L+K +
Sbjct: 304 MLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKL 363
Query: 239 DDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSV 298
+ TLV+ L CA++GA ++G WIHSY G +R V ++L+ Y KCG+ + V
Sbjct: 364 NQITLVSTLSACAQVGALELGRWIHSYIKKHG-IRMNFHVTSALIHMYSKCGDLEKSREV 422
Query: 299 FNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRG-VTPNDSTFVGVLACCAHAGLV 357
FN + R+V W+AMI G+A +G G V +F M V PN TF V C+H GLV
Sbjct: 423 FNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLV 482
Query: 358 DRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLS 417
D LF M + ++P+ +HY C+VD+LGR G++ +A+ I +MP+ P+ ++WGALL
Sbjct: 483 DEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLG 542
Query: 418 ACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKV 477
AC+ H + +AE+A L+ +EP N G HVLLSNIYA+ +W+ V ++R MR +KK
Sbjct: 543 ACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKE 602
Query: 478 PGQSA 482
PG S+
Sbjct: 603 PGCSS 607
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 108/450 (24%), Positives = 192/450 (42%), Gaps = 73/450 (16%)
Query: 11 RILSLLHGAKTRTQLTQIHAHFLRHGL----HHSNQILAHFISVCASLHRVPYATRVFNH 66
R +SL+ + QL Q H H +R G + ++++ A ++ +S + YA +VF+
Sbjct: 32 RHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFA--MAALSSFASLEYARKVFDE 89
Query: 67 SPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQL 126
P PN +N++I+A + P F M + P+ +TFP L+KAA+ + L
Sbjct: 90 IPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSL 149
Query: 127 GQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCK 186
GQSLH V ++ Y +C + A KVF ++E+DV+ WN MI G+ +
Sbjct: 150 GQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQ 209
Query: 187 VGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTV 246
G + LELF++M V + T+V V
Sbjct: 210 KGSPDKALELFKKMESEDV-------------------------------KASHVTMVGV 238
Query: 247 LPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCG---------------- 290
L CA++ + G + SY + ++ ++ N+++D Y KCG
Sbjct: 239 LSACAKIRNLEFGRQVCSYIEENRVNVNL-TLANAMLDMYTKCGSIEDAKRLFDAMEEKD 297
Query: 291 ---------------NPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFED--M 333
+ +A V N MP +++V+WNA+IS NG + +F + +
Sbjct: 298 NVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQL 357
Query: 334 VRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHV 393
+ + N T V L+ CA G ++ GR S K + ++ + +CG +
Sbjct: 358 QKNMKLNQITLVSTLSACAQVGALELGR-WIHSYIKKHGIRMNFHVTSALIHMYSKCGDL 416
Query: 394 REALDLIRSMPMEPTAALWGALLSACRTHG 423
++ ++ S+ + +W A++ HG
Sbjct: 417 EKSREVFNSVE-KRDVFVWSAMIGGLAMHG 445
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 289 bits (739), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 158/434 (36%), Positives = 247/434 (56%), Gaps = 36/434 (8%)
Query: 52 ASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTF 111
AS + A ++F+ P +++ +N++I + + +++ LF M + PD T
Sbjct: 211 ASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTN-VRPDESTM 269
Query: 112 PSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRE 171
+++ A + +LG+ +H + GF + + +++LY+ C
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKC--------------- 314
Query: 172 RDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREM 231
GELET LF R+ + V+SWN +I +EAL+LF+EM
Sbjct: 315 ----------------GELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEM 358
Query: 232 LEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYAND--KGFLRDIVSVGNSLVDFYCKC 289
L G P+D T++++LP CA LGA D+G WIH Y + KG + + S+ SL+D Y KC
Sbjct: 359 LRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKG-VTNASSLRTSLIDMYAKC 417
Query: 290 GNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVL 348
G+ +A VFN + +++ SWNAMI G A +G + LF M + G+ P+D TFVG+L
Sbjct: 418 GDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLL 477
Query: 349 ACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPT 408
+ C+H+G++D GR +F +M +++ PKLEHYGC++DLLG G +EA ++I M MEP
Sbjct: 478 SACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPD 537
Query: 409 AALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVL 468
+W +LL AC+ HG+ E+ E A+ L+ +EP N G +VLLSNIYA RW+EV K R L
Sbjct: 538 GVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRAL 597
Query: 469 MREGHIKKVPGQSA 482
+ + +KKVPG S+
Sbjct: 598 LNDKGMKKVPGCSS 611
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/416 (31%), Positives = 227/416 (54%), Gaps = 8/416 (1%)
Query: 13 LSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVC---ASLHRVPYATRVFNHSPN 69
LSLLH KT L IHA ++ GLH++N L+ I C +PYA VF
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQS 129
PN++++N++ + +LS L+ M + + P+ +TFP +LK+ + + F+ GQ
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISL-GLLPNSYTFPFVLKSCAKSKAFKEGQQ 155
Query: 130 LHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGE 189
+H V LG V ++ +Y R+ DA KVFD+ RDV+ + +I+GY G
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGY 215
Query: 190 LETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPV 249
+E +LF + + VVSWN MIS A+ +EAL LF++M++ PD++T+VTV+
Sbjct: 216 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 275
Query: 250 CARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVS 309
CA+ G+ ++G +H + +D GF ++ + N+L+D Y KCG + +F +P ++V+S
Sbjct: 276 CAQSGSIELGRQVHLWIDDHGFGSNL-KIVNALIDLYSKCGELETACGLFERLPYKDVIS 334
Query: 310 WNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMA 368
WN +I G + + + + LF++M+R G TPND T + +L CAH G +D GR + +
Sbjct: 335 WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYID 394
Query: 369 VKFQLLPKLEHY-GCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHG 423
+ + + ++D+ +CG + A + S+ + + + W A++ HG
Sbjct: 395 KRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHG 449
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 287 bits (735), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 162/474 (34%), Positives = 251/474 (52%), Gaps = 44/474 (9%)
Query: 21 TRTQLTQIHAHFLRHGLHHS----NQILAHFISVCASLHRVPYATRVFNHSPNPNIILFN 76
T Q+ H+ F+ HGLH + +++L F+ + YA+ +F+ PN +++
Sbjct: 23 TVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYD 82
Query: 77 SIIKACSLS--PPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQV 134
++I+ CS S P + L + I+P Y TF L+ A F +G+ +H V
Sbjct: 83 TMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWV 142
Query: 135 TTLG-FARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETG 193
G F G V+ GV+ +Y + + DA KVFDE+ + DV+ W++++ GY + G G
Sbjct: 143 VKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEG 202
Query: 194 LELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARL 253
LE +F+EML +G EPD+ ++ T L CA++
Sbjct: 203 LE-------------------------------VFKEMLVRGIEPDEFSVTTALTACAQV 231
Query: 254 GAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAM 313
GA G+WIH + K ++ V VG +LVD Y KCG + + VF ++ RNV SW A+
Sbjct: 232 GALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAAL 291
Query: 314 ISGMAYNGMGEVGVGLFEDMVR--GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKF 371
I G A G + + + R G+ P+ +GVLA CAH G ++ GR + ++M ++
Sbjct: 292 IGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARY 351
Query: 372 QLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIA 431
+ PK EHY C+VDL+ R G + +ALDLI MPM+P A++WGALL+ CRTH + E+ E+A
Sbjct: 352 GITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELA 411
Query: 432 AKELVNVEPWNSGHH----VLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
+ L+++E N V LSNIY R E KVR ++ + I+K PG S
Sbjct: 412 VQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWS 465
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 285 bits (728), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 156/427 (36%), Positives = 242/427 (56%), Gaps = 11/427 (2%)
Query: 56 RVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLL 115
++ A + F+ +++ +N+II + S + LF + D FT+ +++
Sbjct: 234 KIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFD-----ESPVQDVFTWTAMV 288
Query: 116 KAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVI 175
R + + L ++ + G Y ERM A ++FD M R+V
Sbjct: 289 SGYIQNRMVEEARELFDKMPERNEVSWNAMLAG----YVQGERMEMAKELFDVMPCRNVS 344
Query: 176 VWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKG 235
WN MI GY + G++ LF +M R VSW MI+ ++ EAL LF +M +G
Sbjct: 345 TWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREG 404
Query: 236 FEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAG 295
+ ++ + L CA + A ++G+ +H G+ VGN+L+ YCKCG+ +
Sbjct: 405 GRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCF-VGNALLLMYCKCGSIEEA 463
Query: 296 LSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHA 354
+F EM +++VSWN MI+G + +G GEV + FE M R G+ P+D+T V VL+ C+H
Sbjct: 464 NDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHT 523
Query: 355 GLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGA 414
GLVD+GR+ F +M + ++P +HY C+VDLLGR G + +A +L+++MP EP AA+WG
Sbjct: 524 GLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGT 583
Query: 415 LLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHI 474
LL A R HG+ E+AE AA ++ +EP NSG +VLLSN+YA RW +V K+RV MR+ +
Sbjct: 584 LLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGV 643
Query: 475 KKVPGQS 481
KKVPG S
Sbjct: 644 KKVPGYS 650
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 133/276 (48%), Gaps = 20/276 (7%)
Query: 149 VVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSW 208
+++ Y +G A ++F+ M ERDV WN M+ GY + G ++ +F RM +++ VSW
Sbjct: 132 MIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSW 191
Query: 209 NLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA-N 267
N ++S + K EEA +LF+ ++ LV+ C G + + +
Sbjct: 192 NALLSAYVQNSKMEEACMLFK-------SRENWALVSW--NCLLGGFVKKKKIVEARQFF 242
Query: 268 DKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGV 327
D +RD+VS N+++ Y + G +F+E P+++V +W AM+SG N M E
Sbjct: 243 DSMNVRDVVS-WNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEAR 301
Query: 328 GLFEDMVRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLL 387
LF+ M N+ ++ +LA ++ +ELFD M + + + ++
Sbjct: 302 ELFDKMPE---RNEVSWNAMLAGYVQGERMEMAKELFDVMPCR-----NVSTWNTMITGY 353
Query: 388 GRCGHVREALDLIRSMPMEPTAALWGALLSACRTHG 423
+CG + EA +L MP + W A+++ G
Sbjct: 354 AQCGKISEAKNLFDKMPKRDPVS-WAAMIAGYSQSG 388
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 126/302 (41%), Gaps = 30/302 (9%)
Query: 149 VVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSW 208
+ Y R +A +VF M + +N MI GY + GE E +LF M +R +VSW
Sbjct: 70 AISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSW 129
Query: 209 NLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYAND 268
N+MI KG L RE+ E E D + T+L A+ G D + +
Sbjct: 130 NVMI----KGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPE 185
Query: 269 KGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVG 328
K D+ N+L+ Y + + +F +VSWN ++ G
Sbjct: 186 KN---DV--SWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQ 240
Query: 329 LFEDM-VRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLL 387
F+ M VR V ++ G A +G +D R+LFD V+ G + + +
Sbjct: 241 FFDSMNVRDVVSWNTIITGY----AQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRM 296
Query: 388 GRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEP------W 441
V EA +L MP E W A+L A G+R E+ AKEL +V P W
Sbjct: 297 -----VEEARELFDKMP-ERNEVSWNAML-AGYVQGER--MEM-AKELFDVMPCRNVSTW 346
Query: 442 NS 443
N+
Sbjct: 347 NT 348
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 283 bits (725), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 166/482 (34%), Positives = 262/482 (54%), Gaps = 44/482 (9%)
Query: 11 RILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNP 70
R L+L+ K+ L QIHA + GL H L+ + + +++ + YA + PNP
Sbjct: 11 RCLNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTV-CLSYALSILRQIPNP 69
Query: 71 NIILFNSIIKACSLSPPFQQ---CFHLFSLMRNARA--ISPDYFTFPSLLKAAS-NLRDF 124
++ L+N++I + + Q F L+ + ++R+ + P+ FT+PSL KA+ + +
Sbjct: 70 SVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWH 129
Query: 125 QLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGY 184
+ G++LHA V F E D V ++ Y
Sbjct: 130 RHGRALHAHVLK-----------------------------FLEPVNHDRFVQAALVGFY 160
Query: 185 CKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKK---EEEALVLFREMLEKGFEPDDA 241
G+L LF R+ + + +WN +++ A ++ +EE L+LF M P++
Sbjct: 161 ANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRM---QVRPNEL 217
Query: 242 TLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNE 301
+LV ++ CA LG G W H Y + VG SL+D Y KCG VF+E
Sbjct: 218 SLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQF-VGTSLIDLYSKCGCLSFARKVFDE 276
Query: 302 MPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRG 360
M R+V +NAMI G+A +G G+ G+ L++ ++ +G+ P+ +TFV ++ C+H+GLVD G
Sbjct: 277 MSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEG 336
Query: 361 RELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACR 420
++F+SM + + PK+EHYGC+VDLLGR G + EA + I+ MP++P A LW + L + +
Sbjct: 337 LQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQ 396
Query: 421 THGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQ 480
THGD E EIA K L+ +E NSG++VLLSNIYA RW +VEK R LM++ + K PG
Sbjct: 397 THGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGI 456
Query: 481 SA 482
S
Sbjct: 457 ST 458
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 282 bits (722), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 161/473 (34%), Positives = 255/473 (53%), Gaps = 4/473 (0%)
Query: 13 LSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNI 72
L L +T T +HAH ++ G+ + ++V +A +VF+ P+ +
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 73 ILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHA 132
I + S++ A + + + +FS + ++ + PD F F +L+KA +NL G+ +H
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 133 QVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELET 192
+A V+ +V++YA C + A VFD +R ++ I W M+ GY K G E
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 193 GLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEP-DDATLVTVLPVCA 251
LELFR + +++ SW +IS + K EA +F EM + + D L +++ CA
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249
Query: 252 RLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWN 311
L A+ G +H GF V + N+L+D Y KC + A +F+ M R+VVSW
Sbjct: 250 NLAASIAGRQVHGLVIALGF-DSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWT 308
Query: 312 AMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVK 370
++I GMA +G E + L++DMV GV PN+ TFVG++ C+H G V++GRELF SM
Sbjct: 309 SLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKD 368
Query: 371 FQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEI 430
+ + P L+HY C++DLLGR G + EA +LI +MP P W ALLSAC+ G ++
Sbjct: 369 YGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIR 428
Query: 431 AAKELV-NVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQSA 482
A LV + + + ++LLSNIYA W +V + R + E ++K PG S+
Sbjct: 429 IADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSS 481
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 282 bits (721), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 166/486 (34%), Positives = 263/486 (54%), Gaps = 41/486 (8%)
Query: 2 SKGLQQIERRILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYAT 61
S Q E IL H + L ++H H L +G + I + + L V YA
Sbjct: 74 SPSQQTYELLILCCGHRSSLSDAL-RVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYAR 132
Query: 62 RVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAA--- 118
+VF+ + I ++N++ +A +L+ ++ L+ M N + D FT+ +LKA
Sbjct: 133 KVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKM-NRIGVESDRFTYTYVLKACVAS 191
Query: 119 -SNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVW 177
+ G+ +HA +T G++ H + +V++YA
Sbjct: 192 ECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYA----------------------- 228
Query: 178 NLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLE--KG 235
+ G ++ +F M R+VVSW+ MI+C AK K EAL FREM+ K
Sbjct: 229 --------RFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKD 280
Query: 236 FEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAG 295
P+ T+V+VL CA L A + G+ IH Y +G L I+ V ++LV Y +CG + G
Sbjct: 281 SSPNSVTMVSVLQACASLAALEQGKLIHGYILRRG-LDSILPVISALVTMYGRCGKLEVG 339
Query: 296 LSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHA 354
VF+ M R+VVSWN++IS +G G+ + +FE+M+ G +P TFV VL C+H
Sbjct: 340 QRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHE 399
Query: 355 GLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGA 414
GLV+ G+ LF++M + P++EHY C+VDLLGR + EA +++ M EP +WG+
Sbjct: 400 GLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGS 459
Query: 415 LLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHI 474
LL +CR HG+ E+AE A++ L +EP N+G++VLL++IYAE WDEV++V+ L+ +
Sbjct: 460 LLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGL 519
Query: 475 KKVPGQ 480
+K+PG+
Sbjct: 520 QKLPGR 525
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 281 bits (719), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 156/458 (34%), Positives = 245/458 (53%), Gaps = 36/458 (7%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPN--IILFNSIIKACSL 84
Q+H H + G +L IS+ V A +VF +P + + +N++I +
Sbjct: 74 QLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTA 133
Query: 85 SPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGP 144
+ ++F M+ +S D T L+ + LG+SLH Q G
Sbjct: 134 NSKVTDAAYMFRRMKET-GVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGL----- 187
Query: 145 VRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRS 204
+ +V V N I Y K G +E G LF M +
Sbjct: 188 --------------------------DSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKG 221
Query: 205 VVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHS 264
+++WN +IS ++ + L L+ +M G PD TLV+VL CA LGA +G +
Sbjct: 222 LITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGK 281
Query: 265 YANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGE 324
GF+ ++ V N+ + Y +CGN +VF+ MP++++VSW AMI +GMGE
Sbjct: 282 LVESNGFVPNVF-VSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGE 340
Query: 325 VGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCV 383
+G+ LF+DM+ RG+ P+ + FV VL+ C+H+GL D+G ELF +M +++L P EHY C+
Sbjct: 341 IGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCL 400
Query: 384 VDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNS 443
VDLLGR G + EA++ I SMP+EP A+WGALL AC+ H + ++AE+A +++ EP N
Sbjct: 401 VDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNI 460
Query: 444 GHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
G++VL+SNIY++ + + ++RV+MRE +K PG S
Sbjct: 461 GYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYS 498
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 94/219 (42%), Gaps = 6/219 (2%)
Query: 208 WNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYAN 267
WN+ + LA E++ L+R ML G PD + +L CA L G+ +H +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 268 DKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVS--WNAMISGMAYNGMGEV 325
KG V +L+ YCKCG VF E P + +S +NA+ISG N
Sbjct: 81 -KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 326 GVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVV 384
+F M GV+ + T +G++ C + GR L VK L ++ +
Sbjct: 140 AAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSL-HGQCVKGGLDSEVAVLNSFI 198
Query: 385 DLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHG 423
+ +CG V L MP++ W A++S +G
Sbjct: 199 TMYMKCGSVEAGRRLFDEMPVKGLIT-WNAVISGYSQNG 236
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 281 bits (718), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 165/485 (34%), Positives = 258/485 (53%), Gaps = 19/485 (3%)
Query: 10 RRILSLLHGAKTRTQLTQIHAHFLRHG-LHHSNQILAHFISVCASLHRVPYATRVFNHSP 68
+ L L+ + +++ QIH H + G L N + + L A +VF P
Sbjct: 134 QTFLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMP 193
Query: 69 NPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQ 128
+P++ FN +I + + L+ M + I PD +T SLL +L D +LG+
Sbjct: 194 HPDVSSFNVMIVGYAKQGFSLEALKLYFKMV-SDGIEPDEYTVLSLLVCCGHLSDIRLGK 252
Query: 129 SLHAQVTTLGFARHGPVRV-------GVVELYANCERMGDAGKVFDEMRERDVIVWNLMI 181
+H + R GPV ++++Y C+ G A + FD M+++D+ WN M+
Sbjct: 253 GVHGWI-----ERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMV 307
Query: 182 QGYCKVGELETGLELFRRMGDRSVVSWN-LMISCLAKGKKEEEALVLFREM-LEKGFEPD 239
G+ ++G++E +F +M R +VSWN L+ KG + LF EM + + +PD
Sbjct: 308 VGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPD 367
Query: 240 DATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVF 299
T+V+++ A G G W+H + L+ + ++L+D YCKCG + VF
Sbjct: 368 RVTMVSLISGAANNGELSHGRWVHGLV-IRLQLKGDAFLSSALIDMYCKCGIIERAFMVF 426
Query: 300 NEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVD 358
++V W +MI+G+A++G G+ + LF M GVTPN+ T + VL C+H+GLV+
Sbjct: 427 KTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVE 486
Query: 359 RGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLI-RSMPMEPTAALWGALLS 417
G +F+ M KF P+ EHYG +VDLL R G V EA D++ + MPM P+ ++WG++LS
Sbjct: 487 EGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILS 546
Query: 418 ACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKV 477
ACR D E AE+A EL+ +EP G +VLLSNIYA RW +K R M +KK
Sbjct: 547 ACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKT 606
Query: 478 PGQSA 482
G S+
Sbjct: 607 AGYSS 611
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 119/461 (25%), Positives = 212/461 (45%), Gaps = 78/461 (16%)
Query: 7 QIERRILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAH--FISVCASLHRVPYATRVF 64
Q+ + L LL +R Q Q+ A +R L ++ F S + A +F
Sbjct: 32 QLNHQSLVLLENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLF 91
Query: 65 -NHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRD 123
N +PNPN+ ++N++I A S S +CF L+S M R +SPD TF L+KA+S L +
Sbjct: 92 LNFTPNPNVFVYNTMISAVSSSK--NECFGLYSSMIRHR-VSPDRQTFLYLMKASSFLSE 148
Query: 124 FQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQG 183
+ +H + G C +G+ +WN +++
Sbjct: 149 V---KQIHCHIIVSG-----------------CLSLGN-------------YLWNSLVKF 175
Query: 184 YCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATL 243
Y ++G ++F RM V S+N+MI AK EAL L+ +M+ G EPD+ T+
Sbjct: 176 YMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTV 235
Query: 244 VTVLPVCARLGAADVGEWIHSYANDKG--FLRDIVSVGNSLVDFYCKC------------ 289
+++L C L +G+ +H + +G + +++ + N+L+D Y KC
Sbjct: 236 LSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLI-LSNALLDMYFKCKESGLAKRAFDA 294
Query: 290 -------------------GNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGV-GL 329
G+ +A +VF++MP R++VSWN+++ G + G + V L
Sbjct: 295 MKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVREL 354
Query: 330 FEDM--VRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLL 387
F +M V V P+ T V +++ A+ G + GR + + ++ QL ++D+
Sbjct: 355 FYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWV-HGLVIRLQLKGDAFLSSALIDMY 413
Query: 388 GRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIA 428
+CG + A + ++ E ALW ++++ HG+ + A
Sbjct: 414 CKCGIIERAFMVFKT-ATEKDVALWTSMITGLAFHGNGQQA 453
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 279 bits (713), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 159/480 (33%), Positives = 249/480 (51%), Gaps = 52/480 (10%)
Query: 28 IHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPP 87
+HAH + G+ +I A ++ +V A +VF+ P +I +I AC+ +
Sbjct: 38 LHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGY 97
Query: 88 FQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRV 147
+Q+ F M + D F PSLLKA+ NL D + G+ +H V + +
Sbjct: 98 YQESLDFFREMYK-DGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVS 156
Query: 148 GVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMG------ 201
++++Y+ +G+A KVF ++ E+D++V+N MI GY + + L L + M
Sbjct: 157 SLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKP 216
Query: 202 ---------------------------------DRSVVSWNLMISCLAKGKKEEEALVLF 228
VVSW +IS L + E+A F
Sbjct: 217 DVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAF 276
Query: 229 REMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA-----NDKGFLRDIVSVGNSLV 283
++ML G P+ AT++T+LP C L G+ IH Y+ D GF+R ++L+
Sbjct: 277 KQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVR------SALL 330
Query: 284 DFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDS 342
D Y KCG + +F + P + V++N+MI A +G+ + V LF+ M G +
Sbjct: 331 DMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHL 390
Query: 343 TFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRS 402
TF +L C+HAGL D G+ LF M K++++P+LEHY C+VDLLGR G + EA ++I++
Sbjct: 391 TFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKA 450
Query: 403 MPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEV 462
M MEP +WGALL+ACR HG+ E+A IAAK L +EP NSG+ +LL+++YA W+ V
Sbjct: 451 MRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESV 510
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 161/361 (44%), Gaps = 57/361 (15%)
Query: 110 TFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEM 169
++ L++A R F G+ LHA + T G AR + +V Y C ++ DA KVFDEM
Sbjct: 18 SYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEM 77
Query: 170 RERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFR 229
+RD+ +MI + G + L+ FR M + ++ L K + +L R
Sbjct: 78 PKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRN----LLDR 133
Query: 230 E--------MLEKGFEPDDATLVTVLPVCARLGA--------ADVGE--------WIHSY 265
E +L+ +E D + +++ + ++ G +D+GE I Y
Sbjct: 134 EFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGY 193
Query: 266 ANDK------GFLRDIVSVG--------NSLVDFYCKCGNPQAGLSVFNEMPMR----NV 307
AN+ ++D+ +G N+L+ + N + + M + +V
Sbjct: 194 ANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDV 253
Query: 308 VSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDS 366
VSW ++ISG+ +N E F+ M+ G+ PN +T + +L C + G+E+
Sbjct: 254 VSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHG- 312
Query: 367 MAVKFQLLPKLEHYGCV----VDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTH 422
+ ++ LE +G V +D+ G+CG + EA+ L R P + T + +++ H
Sbjct: 313 ----YSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTP-KKTTVTFNSMIFCYANH 367
Query: 423 G 423
G
Sbjct: 368 G 368
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 278 bits (711), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 173/506 (34%), Positives = 257/506 (50%), Gaps = 48/506 (9%)
Query: 12 ILSLLHGAKTRTQLTQIHAHFLRHGLHH---SNQILAHFISVCASLHRVPYATRVFNHSP 68
ILS AK+ T++ Q HA L+ GL H S L F + V YA + N
Sbjct: 42 ILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIG 101
Query: 69 NPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQ 128
+PN NS+I+A + S + +F M + PD ++F +LKA + F+ G+
Sbjct: 102 SPNGFTHNSVIRAYANSSTPEVALTVFREMLLG-PVFPDKYSFTFVLKACAAFCGFEEGR 160
Query: 129 SLHAQVTTLG--------------FARHG------------PVRVGV-----VELYANCE 157
+H G + R G PVR V + Y
Sbjct: 161 QIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKG 220
Query: 158 RMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAK 217
+ +A +FDEM ER+V WN MI GY G ++ E+F M R VVSWN M++ A
Sbjct: 221 LVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAH 280
Query: 218 GKKEEEALVLFREMLEKGFE-PDDATLVTVLPVCARLGAADVGEWIHSYAND-----KGF 271
E L +F +ML+ E PD TLV+VL CA LG+ GEW+H Y + +GF
Sbjct: 281 VGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGF 340
Query: 272 LRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFE 331
L +LVD Y KCG L VF R+V +WN++IS ++ +G+G+ + +F
Sbjct: 341 L------ATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFS 394
Query: 332 DMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRC 390
+MV G PN TF+GVL+ C H G++D+ R+LF+ M+ +++ P +EHYGC+VDLLGR
Sbjct: 395 EMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRM 454
Query: 391 GHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLS 450
G + EA +L+ +P + + L +LL AC+ G E AE A L+ + +S + +S
Sbjct: 455 GKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMS 514
Query: 451 NIYAEEMRWDEVEKVRVLMREGHIKK 476
N+YA + RW++V R MR + +
Sbjct: 515 NLYASDGRWEKVIDGRRNMRAERVNR 540
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 278 bits (711), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 173/481 (35%), Positives = 249/481 (51%), Gaps = 40/481 (8%)
Query: 8 IERRILS-LLHGAKTR-TQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFN 65
+ +++LS LL + ++ QL +IHA LR G N +L + + + YA +VF+
Sbjct: 8 LTKQMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFD 67
Query: 66 HSPNPNIILFNSIIKACSLSP-PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDF 124
P I L+N++ K + PF+ L+ MR+ + PD FT+P ++KA S L DF
Sbjct: 68 EMHKPRIFLWNTLFKGYVRNQLPFESLL-LYKKMRDL-GVRPDEFTYPFVVKAISQLGDF 125
Query: 125 QLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGY 184
G +LHA V GF G IV ++ Y
Sbjct: 126 SCGFALHAHVVKYGFGCLG-------------------------------IVATELVMMY 154
Query: 185 CKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLV 244
K GEL + LF M + +V+WN ++ + AL F +M + D T+V
Sbjct: 155 MKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVV 214
Query: 245 TVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPM 304
++L C +LG+ ++GE I+ A + +I+ V N+ +D + KCGN +A +F EM
Sbjct: 215 SMLSACGQLGSLEIGEEIYDRARKEEIDCNII-VENARLDMHLKCGNTEAARVLFEEMKQ 273
Query: 305 RNVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGREL 363
RNVVSW+ MI G A NG + LF M G+ PN TF+GVL+ C+HAGLV+ G+
Sbjct: 274 RNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRY 333
Query: 364 FDSM--AVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRT 421
F M + L P+ EHY C+VDLLGR G + EA + I+ MP+EP +WGALL AC
Sbjct: 334 FSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAV 393
Query: 422 HGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
H D + + A LV P +HVLLSNIYA +WD V+KVR MR+ KKV S
Sbjct: 394 HRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYS 453
Query: 482 A 482
+
Sbjct: 454 S 454
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 277 bits (708), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 150/423 (35%), Positives = 229/423 (54%), Gaps = 7/423 (1%)
Query: 65 NHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDF 124
N S + + + S I + + + FS M A + P++ TF +LL +
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLA-GVEPNHITFIALLSGCGDFTSG 87
Query: 125 Q--LGQSLHAQVTTLGFAR-HGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMI 181
LG LH LG R H V ++ +Y+ R A VFD M +++ + WN MI
Sbjct: 88 SEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMI 147
Query: 182 QGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDA 241
GY + G+++ ++F +M +R ++SW MI+ K +EEAL+ FREM G +PD
Sbjct: 148 DGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYV 207
Query: 242 TLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNE 301
++ L C LGA G W+H Y + F ++ V V NSL+D YC+CG + VF
Sbjct: 208 AIIAALNACTNLGALSFGLWVHRYVLSQDF-KNNVRVSNSLIDLYCRCGCVEFARQVFYN 266
Query: 302 MPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRG 360
M R VVSWN++I G A NG + F M +G P+ TF G L C+H GLV+ G
Sbjct: 267 MEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEG 326
Query: 361 RELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACR 420
F M +++ P++EHYGC+VDL R G + +AL L++SMPM+P + G+LL+AC
Sbjct: 327 LRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACS 386
Query: 421 THGDREI-AEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPG 479
HG+ + AE K L ++ + ++V+LSN+YA + +W+ K+R M+ +KK PG
Sbjct: 387 NHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPG 446
Query: 480 QSA 482
S+
Sbjct: 447 FSS 449
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 275 bits (704), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 160/462 (34%), Positives = 251/462 (54%), Gaps = 10/462 (2%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
++H + ++ GL + + + + ASL ++ +VF+ P +++ +N +I + +
Sbjct: 67 KVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNG 126
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
F+ +F M + D T S L A S L++ ++G+ ++ V T VR
Sbjct: 127 RFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVT---EFEMSVR 183
Query: 147 VG--VVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRS 204
+G +V+++ C + A VFD MR+++V W M+ GY G ++ LF R +
Sbjct: 184 IGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKD 243
Query: 205 VVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHS 264
VV W M++ + + +EAL LFR M G PD+ LV++L CA+ GA + G+WIH
Sbjct: 244 VVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHG 303
Query: 265 YANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGE 324
Y N+ D V VG +LVD Y KCG + L VF E+ R+ SW ++I G+A NGM
Sbjct: 304 YINENRVTVDKV-VGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSG 362
Query: 325 VGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCV 383
+ L+ +M GV + TFV VL C H G V GR++F SM + + PK EH C+
Sbjct: 363 RALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCL 422
Query: 384 VDLLGRCGHVREALDLIRSMPMEPTAAL---WGALLSACRTHGDREIAEIAAKELVNVEP 440
+DLL R G + EA +LI M E L + +LLSA R +G+ +IAE A++L VE
Sbjct: 423 IDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEV 482
Query: 441 WNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQSA 482
+S H LL+++YA RW++V VR M++ I+K PG S+
Sbjct: 483 SDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSS 524
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 168/387 (43%), Gaps = 67/387 (17%)
Query: 69 NPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQ 128
P+++++N ++K+ + F + LF +R + + PD FT P +LK+ LR G+
Sbjct: 8 TPSLLMYNKMLKSLADGKSFTKVLALFGELR-GQGLYPDNFTLPVVLKSIGRLRKVIEGE 66
Query: 129 SLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVG 188
+H G V ++ +YA+ ++ KVFDEM +RDV+ WN +I Y G
Sbjct: 67 KVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNG 126
Query: 189 ELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLP 248
E + +F+RM S + + D+ T+V+ L
Sbjct: 127 RFEDAIGVFKRMSQESNLKF------------------------------DEGTIVSTLS 156
Query: 249 VCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVV 308
C+ L ++GE I+ + + + V +GN+LVD +CKCG +VF+ M +NV
Sbjct: 157 ACSALKNLEIGERIYRFVVTEFEMS--VRIGNALVDMFCKCGCLDKARAVFDSMRDKNVK 214
Query: 309 SWNAMISGMAYNGMGEVGVGLFE-----DMV---------------------------RG 336
W +M+ G G + LFE D+V G
Sbjct: 215 CWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAG 274
Query: 337 VTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREA 396
+ P++ V +L CA G +++G+ + + + K+ +VD+ +CG + A
Sbjct: 275 IRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTA-LVDMYAKCGCIETA 333
Query: 397 LDLIRSMPMEPTAALWGALLSACRTHG 423
L++ + TA+ W +L+ +G
Sbjct: 334 LEVFYEIKERDTAS-WTSLIYGLAMNG 359
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 275 bits (704), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 149/410 (36%), Positives = 237/410 (57%), Gaps = 6/410 (1%)
Query: 69 NPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQ 128
N ++ +N++I +Q+ + M ++ I D FT+PS+++A + QLG+
Sbjct: 248 NMKLVAYNAMISGYVNRGFYQEALEMVRRMVSS-GIELDEFTYPSVIRACATAGLLQLGK 306
Query: 129 SLHAQVTTL-GFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKV 187
+HA V F+ H +V LY C + +A +F++M +D++ WN ++ GY
Sbjct: 307 QVHAYVLRREDFSFH--FDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSS 364
Query: 188 GELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVL 247
G + +F+ M +++++SW +MIS LA+ EE L LF M +GFEP D +
Sbjct: 365 GHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAI 424
Query: 248 PVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNV 307
CA LGA G+ H+ GF + S GN+L+ Y KCG + VF MP +
Sbjct: 425 KSCAVLGAYCNGQQYHAQLLKIGFDSSL-SAGNALITMYAKCGVVEEARQVFRTMPCLDS 483
Query: 308 VSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDS 366
VSWNA+I+ + +G G V ++E+M++ G+ P+ T + VL C+HAGLVD+GR+ FDS
Sbjct: 484 VSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDS 543
Query: 367 MAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDRE 426
M +++ P +HY ++DLL R G +A +I S+P +PTA +W ALLS CR HG+ E
Sbjct: 544 METVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNME 603
Query: 427 IAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKK 476
+ IAA +L + P + G ++LLSN++A +W+EV +VR LMR+ +KK
Sbjct: 604 LGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKK 653
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 132/479 (27%), Positives = 200/479 (41%), Gaps = 83/479 (17%)
Query: 20 KTRTQLTQ-IHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPN------- 71
+T QL + +H + + G IL I V + YA ++F+ P+
Sbjct: 27 RTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTM 86
Query: 72 --------------------------IILFNSIIKACSLSPPFQQCFHLFSLMRNARAIS 105
+++N++I S + +LF M++
Sbjct: 87 VSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKH-EGFK 145
Query: 106 PDYFTFPSLLKAASNLRDFQLG-QSLHAQVTTLGFARHGPVRVGVVELYANCER----MG 160
PD FTF S+L + + D + HA G V +V +Y+ C +
Sbjct: 146 PDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLH 205
Query: 161 DAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDR-SVVSWNLMISCLAKGK 219
A KVFDE+ E+D W M+ GY K G + G EL M D +V++N MIS
Sbjct: 206 SARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRG 265
Query: 220 KEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA---NDKGFLRDIV 276
+EAL + R M+ G E D+ T +V+ CA G +G+ +H+Y D F D
Sbjct: 266 FYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFD-- 323
Query: 277 SVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNA------------------------ 312
NSLV Y KCG ++F +MP +++VSWNA
Sbjct: 324 ---NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEK 380
Query: 313 -------MISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELF 364
MISG+A NG GE G+ LF M R G P D F G + CA G G++ +
Sbjct: 381 NILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQ-Y 439
Query: 365 DSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHG 423
+ +K L ++ + +CG V EA + R+MP + + W AL++A HG
Sbjct: 440 HAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVS-WNALIAALGQHG 497
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 176/400 (44%), Gaps = 59/400 (14%)
Query: 112 PSLLKA-----ASNLR--------DFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCER 158
P L++A A+NLR QL +++H + T GF + ++++Y
Sbjct: 5 PDLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSE 64
Query: 159 MGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRR--MGDRSVVSWNLMISCLA 216
+ A ++FDE+ E D I M+ GYC G++ +F + + R V +N MI+ +
Sbjct: 65 LNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFS 124
Query: 217 KGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYAND-KGFLRDI 275
A+ LF +M +GF+PD+ T +VL A L A D + + +A K I
Sbjct: 125 HNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLA-LVADDEKQCVQFHAAALKSGAGYI 183
Query: 276 VSVGNSLVDFYCKCGNPQAGL----SVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFE 331
SV N+LV Y KC + + L VF+E+ ++ SW M++G NG ++G L E
Sbjct: 184 TSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLE 243
Query: 332 ----------------------------DMVR-----GVTPNDSTFVGVLACCAHAGLVD 358
+MVR G+ ++ T+ V+ CA AGL+
Sbjct: 244 GMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQ 303
Query: 359 RGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSA 418
G+++ + + ++ +V L +CG EA + MP + + W ALLS
Sbjct: 304 LGKQVHAYVLRREDFSFHFDN--SLVSLYYKCGKFDEARAIFEKMPAKDLVS-WNALLSG 360
Query: 419 CRTHGDREIAEIAAKEL--VNVEPWNSGHHVLLSNIYAEE 456
+ G A++ KE+ N+ W L N + EE
Sbjct: 361 YVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEE 400
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 275 bits (703), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 137/363 (37%), Positives = 216/363 (59%), Gaps = 34/363 (9%)
Query: 121 LRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLM 180
+ D +LG+++H+ V GF V+ ++ LYANC
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANC------------------------ 36
Query: 181 IQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDD 240
G++ + ++F +M ++ +V+WN +I+ A+ K EEAL L+ EM KG +PD
Sbjct: 37 -------GDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDG 89
Query: 241 ATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFN 300
T+V++L CA++GA +G+ +H Y G R++ S N L+D Y +CG + ++F+
Sbjct: 90 FTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS-SNVLLDLYARCGRVEEAKTLFD 148
Query: 301 EMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM--VRGVTPNDSTFVGVLACCAHAGLVD 358
EM +N VSW ++I G+A NG G+ + LF+ M G+ P + TFVG+L C+H G+V
Sbjct: 149 EMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVK 208
Query: 359 RGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSA 418
G E F M ++++ P++EH+GC+VDLL R G V++A + I+SMPM+P +W LL A
Sbjct: 209 EGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGA 268
Query: 419 CRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVP 478
C HGD ++AE A +++ +EP +SG +VLLSN+YA E RW +V+K+R M +KKVP
Sbjct: 269 CTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVP 328
Query: 479 GQS 481
G S
Sbjct: 329 GHS 331
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 126/299 (42%), Gaps = 40/299 (13%)
Query: 28 IHAHFLRHG---LHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSL 84
IH+ +R G L + L H + C V A +VF+ P +++ +NS+I +
Sbjct: 10 IHSVVIRSGFGSLIYVQNSLLHLYANCGD---VASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 85 SPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGP 144
+ ++ L++ M N++ I PD FT SLL A + + LG+ +H + +G R+
Sbjct: 67 NGKPEEALALYTEM-NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLH 125
Query: 145 VRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRS 204
+++LYA C R+ +A +FDEM +++ + W +I G G + +ELF+ M
Sbjct: 126 SSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES-- 183
Query: 205 VVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVG-EWIH 263
+G P + T V +L C+ G G E+
Sbjct: 184 ----------------------------TEGLLPCEITFVGILYACSHCGMVKEGFEYFR 215
Query: 264 SYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR-NVVSWNAMISGMAYNG 321
+ I G +VD + G + MPM+ NVV W ++ +G
Sbjct: 216 RMREEYKIEPRIEHFG-CMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 273
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 275 bits (702), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 172/543 (31%), Positives = 266/543 (48%), Gaps = 73/543 (13%)
Query: 10 RRILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPN 69
++I +L+ A T L QIH + H LHH ++ + + Y+ +F+H+
Sbjct: 14 QQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQF 73
Query: 70 PNIILFNS-----------------------------------IIKACSLSPPFQQCFHL 94
PNI L+NS ++KAC+ + + L
Sbjct: 74 PNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDL 133
Query: 95 FSLMRNARAISPDYFTFPSLLKAASNL---------------RDFQLGQSLHAQVTTLGF 139
SL+ + D SLL S R +L + TT G
Sbjct: 134 HSLVVKC-GFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGR 192
Query: 140 ARHG-------------PVRVGVVELYANCERMGDAG------KVFDEMR-ERDVIVWNL 179
R P +V++ + C +GD K +EM +++ V
Sbjct: 193 HREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTT 252
Query: 180 MIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPD 239
++ Y K G++E +F M ++ +V+W+ MI A +E + LF +ML++ +PD
Sbjct: 253 LVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPD 312
Query: 240 DATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVF 299
++V L CA LGA D+GEW S + FL ++ + N+L+D Y KCG G VF
Sbjct: 313 QFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLF-MANALIDMYAKCGAMARGFEVF 371
Query: 300 NEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVD 358
EM +++V NA ISG+A NG ++ +F + G++P+ STF+G+L C HAGL+
Sbjct: 372 KEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQ 431
Query: 359 RGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSA 418
G F++++ + L +EHYGC+VDL GR G + +A LI MPM P A +WGALLS
Sbjct: 432 DGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491
Query: 419 CRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVP 478
CR D ++AE KEL+ +EPWN+G++V LSNIY+ RWDE +VR +M + +KK+P
Sbjct: 492 CRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIP 551
Query: 479 GQS 481
G S
Sbjct: 552 GYS 554
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 272 bits (696), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 172/532 (32%), Positives = 258/532 (48%), Gaps = 64/532 (12%)
Query: 14 SLLHGAKTRTQLTQIHAHFLRHGLHHS-NQILAHFISVCASLHRVPYATRVFNHSPNPNI 72
+L K+ L QIHA +R GL N I S +S + Y++ VF P+P
Sbjct: 15 TLFKLCKSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSPGT 74
Query: 73 ILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHA 132
L+N +IK S F + + M PD +TFP ++K SN ++G S+H
Sbjct: 75 YLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHG 134
Query: 133 QVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELE- 191
V +GF + V V+ Y C+ + A KVF EM ER+ + W ++ Y K GELE
Sbjct: 135 LVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEE 194
Query: 192 --------------------TGL----------ELFRRMGDRSVVSWNLMISCLAKGK-- 219
GL +LF M R ++S+ MI AKG
Sbjct: 195 AKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDM 254
Query: 220 -----------------------------KEEEALVLFREMLEKGFEPDDATLVTVLPVC 250
+ EA +F EM K +PD+ +V ++ C
Sbjct: 255 VSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSAC 314
Query: 251 ARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSW 310
+++G ++ E + SY + + V +L+D KCG+ +F EMP R++VS+
Sbjct: 315 SQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSY 374
Query: 311 NAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAV 369
+M+ GMA +G G + LFE MV G+ P++ F +L C + LV+ G F+ M
Sbjct: 375 CSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRK 434
Query: 370 KFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAE 429
K+ +L +HY C+V+LL R G ++EA +LI+SMP E A+ WG+LL C HG+ EIAE
Sbjct: 435 KYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAE 494
Query: 430 IAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
+ A+ L +EP ++G +VLLSNIYA RW +V +R M E I K+ G+S
Sbjct: 495 VVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRS 546
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 272 bits (695), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 172/533 (32%), Positives = 260/533 (48%), Gaps = 84/533 (15%)
Query: 27 QIHAHFLRHG------LHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIK 80
Q+HA ++ G L SN +L + V R+ A +F P + + FN++I
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCEV----RRLDLACVLFEEIPEKDSVTFNTLIT 223
Query: 81 ACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFA 140
+ + HLF MR + P FTF +LKA L DF LGQ LHA T GF+
Sbjct: 224 GYEKDGLYTESIHLFLKMRQS-GHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFS 282
Query: 141 RHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRM 200
R V +++ Y+ +R+ + +FDEM E D + +N++I Y + + E L FR M
Sbjct: 283 RDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREM 342
Query: 201 G----DRSVVSWNLMISC-----------------------------------LAKGKKE 221
DR + M+S AK +
Sbjct: 343 QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMF 402
Query: 222 EEALVLFREM---------------LEKG----------------FEPDDATLVTVLPVC 250
EEA ++F+ + ++KG D +T TVL
Sbjct: 403 EEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKAS 462
Query: 251 ARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSW 310
A + +G+ +H++ G L ++ S G+ LVD Y KCG+ + + VF EMP RN VSW
Sbjct: 463 ASFASLLLGKQLHAFIIRSGNLENVFS-GSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSW 521
Query: 311 NAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAV 369
NA+IS A NG GE +G F M+ G+ P+ + +GVL C+H G V++G E F +M+
Sbjct: 522 NALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSP 581
Query: 370 KFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAE 429
+ + PK +HY C++DLLGR G EA L+ MP EP +W ++L+ACR H ++ +AE
Sbjct: 582 IYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAE 641
Query: 430 IAAKELVNVEPW-NSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
AA++L ++E ++ +V +SNIYA W++V V+ MRE IKKVP S
Sbjct: 642 RAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYS 694
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 160/364 (43%), Gaps = 36/364 (9%)
Query: 57 VPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLM-RNARAISPDYFTFPSLL 115
V A +F+ P+ ++ + ++ + + F + F LF M R++ PD+ TF +LL
Sbjct: 95 VSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLL 154
Query: 116 KAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVI 175
++ +HA LGF + P +
Sbjct: 155 PGCNDAVPQNAVGQVHAFAVKLGFDTN-PF----------------------------LT 185
Query: 176 VWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKG 235
V N++++ YC+V L+ LF + ++ V++N +I+ K E++ LF +M + G
Sbjct: 186 VSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSG 245
Query: 236 FEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAG 295
+P D T VL L +G+ +H+ + GF RD SVGN ++DFY K
Sbjct: 246 HQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRD-ASVGNQILDFYSKHDRVLET 304
Query: 296 LSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACCAHA 354
+F+EMP + VS+N +IS + E + F +M G + F +L+ A+
Sbjct: 305 RMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANL 364
Query: 355 GLVDRGRELFDSMAVKFQLLPKLEHYG-CVVDLLGRCGHVREALDLIRSMPMEPTAALWG 413
+ GR+L + H G +VD+ +C EA + +S+P T + W
Sbjct: 365 SSLQMGRQL--HCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVS-WT 421
Query: 414 ALLS 417
AL+S
Sbjct: 422 ALIS 425
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 113/223 (50%), Gaps = 4/223 (1%)
Query: 130 LHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGE 189
+ A++ GF +VE ++ A KV+DEM ++ + N MI G+ K G+
Sbjct: 35 VDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGD 94
Query: 190 LETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKG--FEPDDATLVTVL 247
+ + +LF M DR+VV+W +++ A+ +EA LFR+M PD T T+L
Sbjct: 95 VSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLL 154
Query: 248 PVCARLGAADVGEWIHSYANDKGFLRD-IVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRN 306
P C + +H++A GF + ++V N L+ YC+ +F E+P ++
Sbjct: 155 PGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKD 214
Query: 307 VVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVL 348
V++N +I+G +G+ + LF M + G P+D TF GVL
Sbjct: 215 SVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVL 257
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 272 bits (695), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 167/488 (34%), Positives = 239/488 (48%), Gaps = 54/488 (11%)
Query: 16 LHGAKTRTQLTQIH--AHFLRHGL--------HHSNQILAHFISVCASLHRVP------Y 59
+HG K T H HF+ N++LA +S C SL RV +
Sbjct: 12 VHGTKRTNHFTIFHRLNHFVTTSSSSVTPLSPQDRNKLLATLLSNCTSLARVRRIHGDIF 71
Query: 60 ATRVFNHSPNPNIILFNSIIKA-CSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAA 118
+R+ + P L+N+I+++ P ++R+ + PD ++ P ++KAA
Sbjct: 72 RSRILDQYPIA--FLWNNIMRSYIRHESPLDAIQVYLGMVRST--VLPDRYSLPIVIKAA 127
Query: 119 SNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWN 178
+ DF LG+ LH+ LGF V DE E I
Sbjct: 128 VQIHDFTLGKELHSVAVRLGF-------------------------VGDEFCESGFITL- 161
Query: 179 LMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEP 238
YCK GE E ++F +R + SWN +I L + EA+ +F +M G EP
Sbjct: 162 -----YCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEP 216
Query: 239 DDATLVTVLPVCARLGAADVGEWIHS-YANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLS 297
DD T+V+V C LG + +H K + + + NSL+D Y KCG
Sbjct: 217 DDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASH 276
Query: 298 VFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGL 356
+F EM RNVVSW++MI G A NG + F M GV PN TFVGVL+ C H GL
Sbjct: 277 IFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGL 336
Query: 357 VDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALL 416
V+ G+ F M +F+L P L HYGC+VDLL R G ++EA ++ MPM+P +WG L+
Sbjct: 337 VEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLM 396
Query: 417 SACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKK 476
C GD E+AE A +V +EPWN G +V+L+N+YA W +VE+VR LM+ + K
Sbjct: 397 GGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAK 456
Query: 477 VPGQSATT 484
+P S +
Sbjct: 457 IPAYSYAS 464
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 132/331 (39%), Positives = 205/331 (61%), Gaps = 2/331 (0%)
Query: 153 YANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMI 212
Y M +A +FD+M RDV+ WN +++GY +G++E +F M +R+V SWN +I
Sbjct: 100 YIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLI 159
Query: 213 SCLAKGKKEEEALVLFREMLEKG-FEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGF 271
A+ + E L F+ M+++G P+DAT+ VL CA+LGA D G+W+H Y G+
Sbjct: 160 KGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGY 219
Query: 272 LRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFE 331
+ V+V N+L+D Y KCG + + VF + R+++SWN MI+G+A +G G + LF
Sbjct: 220 NKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFH 279
Query: 332 DMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRC 390
+M G++P+ TFVGVL C H GLV+ G F+SM F ++P++EH GCVVDLL R
Sbjct: 280 EMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRA 339
Query: 391 GHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLS 450
G + +A++ I MP++ A +W LL A + + +I E+A +EL+ +EP N + V+LS
Sbjct: 340 GFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLS 399
Query: 451 NIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
NIY + R+D+ +++V MR+ KK G S
Sbjct: 400 NIYGDAGRFDDAARLKVAMRDTGFKKEAGVS 430
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 117/267 (43%), Gaps = 43/267 (16%)
Query: 159 MGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKG 218
+ A KVF EM E++V++W MI GY +L + F +R +V WN MIS +
Sbjct: 44 IASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEM 103
Query: 219 KKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSV 278
EA LF +M P RD++S
Sbjct: 104 GNMLEARSLFDQM----------------PC-----------------------RDVMS- 123
Query: 279 GNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR--G 336
N++++ Y G+ +A VF++MP RNV SWN +I G A NG +G F+ MV
Sbjct: 124 WNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGS 183
Query: 337 VTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREA 396
V PND+T VL+ CA G D G+ + + ++D+ G+CG + A
Sbjct: 184 VVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIA 243
Query: 397 LDLIRSMPMEPTAALWGALLSACRTHG 423
+++ + + + W +++ HG
Sbjct: 244 MEVFKGIKRRDLIS-WNTMINGLAAHG 269
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 153/473 (32%), Positives = 252/473 (53%), Gaps = 40/473 (8%)
Query: 15 LLHGAKTRTQLTQIHAHFLRHGLHHSNQI--LAHFISVCASLHRVPYATRVFNHSPNPNI 72
L+ + +L QI A+ ++ + + + L +F + + + YA +F P+I
Sbjct: 35 LISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDI 94
Query: 73 ILFNSIIKACSLSPPFQQCFHLFSLMRN--ARAISPDYFTFPSLLKAASNLRDFQLGQSL 130
++FNS+ + S F +FSL I PD +TFPSLLKA + + + G+ L
Sbjct: 95 VIFNSMARGYS---RFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQL 151
Query: 131 HAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGEL 190
H LG + V ++ +Y CE + A VFD
Sbjct: 152 HCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFD----------------------- 188
Query: 191 ETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVC 250
R+ + VV +N MI+ A+ + EAL LFREM K +P++ TL++VL C
Sbjct: 189 --------RIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSC 240
Query: 251 ARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSW 310
A LG+ D+G+WIH YA F + V V +L+D + KCG+ +S+F +M ++ +W
Sbjct: 241 ALLGSLDLGKWIHKYAKKHSFCK-YVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAW 299
Query: 311 NAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAV 369
+AMI A +G E + +FE M V P++ TF+G+L C+H G V+ GR+ F M
Sbjct: 300 SAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVS 359
Query: 370 KFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAE 429
KF ++P ++HYG +VDLL R G++ +A + I +P+ PT LW LL+AC +H + ++AE
Sbjct: 360 KFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAE 419
Query: 430 IAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQSA 482
++ + ++ + G +V+LSN+YA +W+ V+ +R +M++ KVPG S+
Sbjct: 420 KVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSS 472
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 159/500 (31%), Positives = 258/500 (51%), Gaps = 41/500 (8%)
Query: 9 ERRILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVP-YATRVFNHS 67
E +SL+H K L +HA LR G+ S+++ A +S C+SL + P Y+ +F +S
Sbjct: 29 ESHFISLIHACKDTASLRHVHAQILRRGVL-SSRVAAQLVS-CSSLLKSPDYSLSIFRNS 86
Query: 68 PNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLG 127
N + N++I+ + + F+ F LM + PD TFP +LK+ S L LG
Sbjct: 87 EERNPFVLNALIRGLTENARFESSVRHFILMLRL-GVKPDRLTFPFVLKSNSKLGFRWLG 145
Query: 128 QSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDE----MRERDVIVWNLMIQG 183
++LHA VR+ +V++YA ++ A +VF+E +++ +++WN++I G
Sbjct: 146 RALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLING 205
Query: 184 YCKV-------------------------------GELETGLELFRRMGDRSVVSWNLMI 212
YC+ GEL +LF M +++VVSW +I
Sbjct: 206 YCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLI 265
Query: 213 SCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFL 272
+ ++ E A+ + EMLEKG +P++ T+ VL C++ GA G IH Y D G
Sbjct: 266 NGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIK 325
Query: 273 RDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFED 332
D ++G +LVD Y KCG +VF+ M ++++SW AMI G A +G + F
Sbjct: 326 LD-RAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQ 384
Query: 333 MV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCG 391
M+ G P++ F+ VL C ++ VD G FDSM + + + P L+HY VVDLLGR G
Sbjct: 385 MMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAG 444
Query: 392 HVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSN 451
+ EA +L+ +MP+ P W AL AC+ H AE ++ L+ ++P G ++ L
Sbjct: 445 KLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDK 504
Query: 452 IYAEEMRWDEVEKVRVLMRE 471
+A + +VEK R+ +++
Sbjct: 505 THASKGNIQDVEKRRLSLQK 524
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 269 bits (688), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 146/457 (31%), Positives = 235/457 (51%), Gaps = 35/457 (7%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
QIH + +RH + + + I V A +F+ + ++++F ++I +
Sbjct: 361 QIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNG 420
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
+ +F + + ISP+ T S+L L +LG+ LH + GF +
Sbjct: 421 LYIDSLEMFRWLVKVK-ISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIG 479
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
V+++YA C RM A E+F R+ R +V
Sbjct: 480 CAVIDMYAKCGRMNLA-------------------------------YEIFERLSKRDIV 508
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA 266
SWN MI+ A+ A+ +FR+M G D ++ L CA L + G+ IH +
Sbjct: 509 SWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFM 568
Query: 267 NDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVG 326
D+ S ++L+D Y KCGN +A ++VF M +N+VSWN++I+ +G +
Sbjct: 569 IKHSLASDVYS-ESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDS 627
Query: 327 VGLFEDMVR--GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVV 384
+ LF +MV G+ P+ TF+ +++ C H G VD G F SM + + P+ EHY CVV
Sbjct: 628 LCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVV 687
Query: 385 DLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSG 444
DL GR G + EA + ++SMP P A +WG LL ACR H + E+AE+A+ +L++++P NSG
Sbjct: 688 DLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSG 747
Query: 445 HHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
++VL+SN +A W+ V KVR LM+E ++K+PG S
Sbjct: 748 YYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYS 784
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 158/366 (43%), Gaps = 38/366 (10%)
Query: 56 RVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLL 115
++ +++F+ + +++N ++ + FS+MR + ISP+ TF +L
Sbjct: 188 KIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQ-ISPNAVTFDCVL 246
Query: 116 KAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVI 175
++ LG LH V G G ++ ++ +Y+ C R DA K
Sbjct: 247 SVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASK----------- 295
Query: 176 VWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKG 235
LFR M V+WN MIS + EE+L F EM+ G
Sbjct: 296 --------------------LFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSG 335
Query: 236 FEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAG 295
PD T ++LP ++ + + IH Y DI + ++L+D Y KC
Sbjct: 336 VLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIF-LTSALIDAYFKCRGVSMA 394
Query: 296 LSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHA 354
++F++ +VV + AMISG +NG+ + +F +V+ ++PN+ T V +L
Sbjct: 395 QNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGIL 454
Query: 355 GLVDRGRELFDSMAVKFQLLPKLEHYGC-VVDLLGRCGHVREALDLIRSMPMEPTAALWG 413
+ GREL + K + GC V+D+ +CG + A ++ + + W
Sbjct: 455 LALKLGRELHGFIIKKG--FDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVS-WN 511
Query: 414 ALLSAC 419
++++ C
Sbjct: 512 SMITRC 517
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 156/358 (43%), Gaps = 48/358 (13%)
Query: 2 SKGLQQIERRILSLLHGAKTRTQL----TQIHAHFLRH---GLHHSNQILAHFISVCASL 54
S+ L++ R LSLL A + L Q+HA + + G ++++ + ++C S
Sbjct: 27 SRFLEETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSF 86
Query: 55 H---RVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTF 111
++ Y + S P +NSII + + Q + M +SPD TF
Sbjct: 87 SDCGKMFYRLDLRRSSIRP----WNSIISSFVRNGLLNQALAFYFKML-CFGVSPDVSTF 141
Query: 112 PSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRE 171
P L+KA L++F+ L V++LG + V +++ Y ++ K+FD + +
Sbjct: 142 PCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQ 201
Query: 172 RDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREM 231
+D ++WN+M+ GY K G L++ + KG F M
Sbjct: 202 KDCVIWNVMLNGYAKCGALDS----------------------VIKG---------FSVM 230
Query: 232 LEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGN 291
P+ T VL VCA D+G +H G + S+ NSL+ Y KCG
Sbjct: 231 RMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFE-GSIKNSLLSMYSKCGR 289
Query: 292 PQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVL 348
+F M + V+WN MISG +G+ E + F +M+ GV P+ TF +L
Sbjct: 290 FDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLL 347
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 269 bits (687), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 160/468 (34%), Positives = 242/468 (51%), Gaps = 36/468 (7%)
Query: 44 LAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPP-FQQCFHLFSLMRNAR 102
L I+ C + A RVF+ N I +NS++ S P + LF +
Sbjct: 64 LNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIP--- 120
Query: 103 AISPDYFTFPSLLKAASNLRDFQLGQSLHAQV----------TTLGFARHGPVRVG---- 148
PD F++ +L +F+ QS ++ G+AR G +
Sbjct: 121 --EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELF 178
Query: 149 -------------VVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLE 195
++ Y C + A F R V+ W MI GY K ++E
Sbjct: 179 YSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEA 238
Query: 196 LFRRMG-DRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLG 254
+F+ M ++++V+WN MIS + + E+ L LFR MLE+G P+ + L + L C+ L
Sbjct: 239 MFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELS 298
Query: 255 AADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMI 314
A +G IH + D+ ++ SL+ YCKCG +F M ++VV+WNAMI
Sbjct: 299 ALQLGRQIHQIVSKSTLCNDVTAL-TSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMI 357
Query: 315 SGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQL 373
SG A +G + + LF +M+ + P+ TFV VL C HAGLV+ G F+SM +++
Sbjct: 358 SGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKV 417
Query: 374 LPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAK 433
P+ +HY C+VDLLGR G + EAL LIRSMP P AA++G LL ACR H + E+AE AA+
Sbjct: 418 EPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAE 477
Query: 434 ELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
+L+ + N+ +V L+NIYA + RW++V +VR M+E ++ KVPG S
Sbjct: 478 KLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYS 525
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 268 bits (686), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 163/488 (33%), Positives = 260/488 (53%), Gaps = 38/488 (7%)
Query: 1 MSKGLQQIER-RILSLLHGAKTRTQLTQ---IHAHFLRHGLHHSNQILAHFISVCASLHR 56
+S GL+ ++ ++SLL + IH++ ++HGL + I + A R
Sbjct: 238 LSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGR 297
Query: 57 VPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLK 116
+ +VF+ ++I +NSIIKA L+ + LF MR +R I PD T SL
Sbjct: 298 LRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSR-IQPDCLTLISLAS 356
Query: 117 AASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIV 176
S L D + +S+ G+ F E D+ +
Sbjct: 357 ILSQLGDIRACRSVQGFTLRKGW--------------------------FLE----DITI 386
Query: 177 WNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKG- 235
N ++ Y K+G +++ +F + + V+SWN +IS A+ EA+ ++ M E+G
Sbjct: 387 GNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGE 446
Query: 236 FEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAG 295
+ T V+VLP C++ GA G +H G D+ V SL D Y KCG +
Sbjct: 447 IAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVV-TSLADMYGKCGRLEDA 505
Query: 296 LSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHA 354
LS+F ++P N V WN +I+ ++G GE V LF++M+ GV P+ TFV +L+ C+H+
Sbjct: 506 LSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHS 565
Query: 355 GLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGA 414
GLVD G+ F+ M + + P L+HYGC+VD+ GR G + AL I+SM ++P A++WGA
Sbjct: 566 GLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGA 625
Query: 415 LLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHI 474
LLSACR HG+ ++ +IA++ L VEP + G+HVLLSN+YA +W+ V+++R + +
Sbjct: 626 LLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGL 685
Query: 475 KKVPGQSA 482
+K PG S+
Sbjct: 686 RKTPGWSS 693
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 161/382 (42%), Gaps = 41/382 (10%)
Query: 43 ILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNAR 102
I A +++ L V A F+H N ++ +N +I + + FSL +
Sbjct: 88 ISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSS 147
Query: 103 AISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDA 162
++PDY TFPS+LKA + D G +H GF V ++ LY+ + +G+A
Sbjct: 148 GLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNA 204
Query: 163 GKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEE 222
+FDEM RD+ WN MI GYC+ G + L L +
Sbjct: 205 RILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL---------------------- 242
Query: 223 EALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSL 282
R M D T+V++L C G + G IHSY+ G ++ V N L
Sbjct: 243 ------RAM-------DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELF-VSNKL 288
Query: 283 VDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPND 341
+D Y + G + VF+ M +R+++SWN++I N + LF++M + + P+
Sbjct: 289 IDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDC 348
Query: 342 STFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIR 401
T + + + + G + R + K L + VV + + G V A +
Sbjct: 349 LTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFN 408
Query: 402 SMPMEPTAALWGALLSACRTHG 423
+P + W ++S +G
Sbjct: 409 WLPNTDVIS-WNTIISGYAQNG 429
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 124/273 (45%), Gaps = 14/273 (5%)
Query: 172 RDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFRE- 230
++V + ++ YC +G + F + +R V +WNLMIS + E + F
Sbjct: 84 QNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF 143
Query: 231 MLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCG 290
ML G PD T +VL C + G IH A GF+ D V V SL+ Y +
Sbjct: 144 MLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWD-VYVAASLIHLYSRYK 199
Query: 291 NPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRGVTPNDS-TFVGVLA 349
+F+EMP+R++ SWNAMISG +G + + L G+ DS T V +L+
Sbjct: 200 AVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL----SNGLRAMDSVTVVSLLS 255
Query: 350 CCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTA 409
C AG +RG + S ++K L +L ++DL G +R+ + M +
Sbjct: 256 ACTEAGDFNRGVTI-HSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLI 314
Query: 410 ALWGALLSACRTHGD--REIAEIAAKELVNVEP 440
+ W +++ A + R I+ L ++P
Sbjct: 315 S-WNSIIKAYELNEQPLRAISLFQEMRLSRIQP 346
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 268 bits (685), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 141/419 (33%), Positives = 234/419 (55%), Gaps = 4/419 (0%)
Query: 60 ATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAAS 119
A VF+ P +++ +N+++ + + + R + I + F+F LL A
Sbjct: 132 ARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRS-GIKFNEFSFAGLLTACV 190
Query: 120 NLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNL 179
R QL + H QV GF + + +++ YA C +M A + FDEM +D+ +W
Sbjct: 191 KSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTT 250
Query: 180 MIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPD 239
+I GY K+G++E +LF M +++ VSW +I+ + AL LFR+M+ G +P+
Sbjct: 251 LISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPE 310
Query: 240 DATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVF 299
T + L A + + G+ IH Y + +R V +SL+D Y K G+ +A VF
Sbjct: 311 QFTFSSCLCASASIASLRHGKEIHGYM-IRTNVRPNAIVISSLIDMYSKSGSLEASERVF 369
Query: 300 NEMPMR-NVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLV 357
+ + V WN MIS +A +G+G + + +DM++ V PN +T V +L C+H+GLV
Sbjct: 370 RICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLV 429
Query: 358 DRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLS 417
+ G F+SM V+ ++P EHY C++DLLGR G +E + I MP EP +W A+L
Sbjct: 430 EEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILG 489
Query: 418 ACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKK 476
CR HG+ E+ + AA EL+ ++P +S ++LLS+IYA+ +W+ VEK+R +M++ + K
Sbjct: 490 VCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNK 548
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 168/396 (42%), Gaps = 42/396 (10%)
Query: 111 FPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVG-VVELYANCERMGDAGKVFDEM 169
SLL+ + + + G+ +H + GF R + ++ +Y C + DA KVFD+M
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 170 RERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFR 229
R++ WN M+ GY K G L +F M +R VVSWN M+ A+ EAL ++
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYK 168
Query: 230 EMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKC 289
E G + ++ + +L C + + H GFL ++V + S++D Y KC
Sbjct: 169 EFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVV-LSCSIIDAYAKC 227
Query: 290 -------------------------------GNPQAGLSVFNEMPMRNVVSWNAMISGMA 318
G+ +A +F EMP +N VSW A+I+G
Sbjct: 228 GQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYV 287
Query: 319 YNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKL 377
G G + LF M+ GV P TF L A + G+E+ M ++ + P
Sbjct: 288 RQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYM-IRTNVRPNA 346
Query: 378 EHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVN 437
++D+ + G + + + R + W ++SA HG A +++
Sbjct: 347 IVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIK 406
Query: 438 --VEPWNSGHHVLL-----SNIYAEEMRWDEVEKVR 466
V+P + V+L S + E +RW E V+
Sbjct: 407 FRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQ 442
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 96/250 (38%), Gaps = 34/250 (13%)
Query: 223 EALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSL 282
+A+ + ++G L ++L C + G+WIH + GF R + N L
Sbjct: 29 QAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHL 88
Query: 283 VDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR------- 335
+ Y KCG P VF++M +RN+ SWN M+SG +GM +F+ M
Sbjct: 89 IGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWN 148
Query: 336 -------------------------GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVK 370
G+ N+ +F G+L C + + R+ + V
Sbjct: 149 TMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVA 208
Query: 371 FQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEI 430
L + ++D +CG + A M ++ +W L+S GD E AE
Sbjct: 209 -GFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDI-HIWTTLISGYAKLGDMEAAEK 266
Query: 431 AAKELVNVEP 440
E+ P
Sbjct: 267 LFCEMPEKNP 276
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 268 bits (684), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 152/458 (33%), Positives = 240/458 (52%), Gaps = 37/458 (8%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
Q HAH ++ GL + IS +S +A+R+F+ + + +++ + ++I +
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNG 183
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
+ F M+ ++ + T S+LKAA + D + G+S+H G + V
Sbjct: 184 SASEAMVYFVEMKKT-GVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVK-CDVF 241
Query: 147 VG--VVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRS 204
+G +V++Y C DA KVFDE M R+
Sbjct: 242 IGSSLVDMYGKCSCYDDAQKVFDE-------------------------------MPSRN 270
Query: 205 VVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHS 264
VV+W +I+ + + ++ +++F EML+ P++ TL +VL CA +GA G +H
Sbjct: 271 VVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHC 330
Query: 265 YANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGE 324
Y K + + G +L+D Y KCG + + VF + +NV +W AMI+G A +G
Sbjct: 331 YMI-KNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYAR 389
Query: 325 VGVGLFEDMVRG-VTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCV 383
LF M+ V+PN+ TF+ VL+ CAH GLV+ GR LF SM +F + PK +HY C+
Sbjct: 390 DAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACM 449
Query: 384 VDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNS 443
VDL GR G + EA LI MPMEPT +WGAL +C H D E+ + AA ++ ++P +S
Sbjct: 450 VDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHS 509
Query: 444 GHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
G + LL+N+Y+E WDEV +VR M++ + K PG S
Sbjct: 510 GRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFS 547
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 184/408 (45%), Gaps = 45/408 (11%)
Query: 24 QLTQIHAHFLRHGLHHSNQILAHFIS-----VCASLHRVPYATRVFNHSPNPNIILFNSI 78
L QIH L + ++ + L F+S C + + YA R+ +I L++S+
Sbjct: 16 HLKQIHCLLLTSPIFYTRRDL--FLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSL 73
Query: 79 IKACS--LSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTT 136
I S ++ + F + MR I P TFP LLKA LRD Q HA +
Sbjct: 74 IGHFSGGITLNRRLSFLAYRHMRRNGVI-PSRHTFPPLLKAVFKLRDSNPFQ-FHAHIVK 131
Query: 137 LGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLEL 196
G VR ++ Y++ A ++FD ++DV+ W MI G+ + G
Sbjct: 132 FGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGS------- 184
Query: 197 FRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAA 256
EA+V F EM + G ++ T+V+VL ++
Sbjct: 185 ------------------------ASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDV 220
Query: 257 DVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISG 316
G +H + G ++ V +G+SLVD Y KC VF+EMP RNVV+W A+I+G
Sbjct: 221 RFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAG 280
Query: 317 MAYNGMGEVGVGLFEDMVRG-VTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLP 375
+ + G+ +FE+M++ V PN+ T VL+ CAH G + RGR + M +K +
Sbjct: 281 YVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYM-IKNSIEI 339
Query: 376 KLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHG 423
++DL +CG + EA+ L+ E W A+++ HG
Sbjct: 340 NTTAGTTLIDLYVKCGCLEEAI-LVFERLHEKNVYTWTAMINGFAAHG 386
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 147/422 (34%), Positives = 237/422 (56%), Gaps = 5/422 (1%)
Query: 64 FNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRD 123
F +I+ +NS+I + + +FS M +SPD FT S+L A +NL
Sbjct: 235 FEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEK 294
Query: 124 FQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIV--WNLMI 181
+G+ +H+ + T GF G V ++ +Y+ C + A ++ ++ +D+ + + ++
Sbjct: 295 LCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALL 354
Query: 182 QGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDA 241
GY K+G++ +F + DR VV+W MI + EA+ LFR M+ G P+
Sbjct: 355 DGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSY 414
Query: 242 TLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNE 301
TL +L V + L + G+ IH A G + VSV N+L+ Y K GN + F+
Sbjct: 415 TLAAMLSVASSLASLSHGKQIHGSAVKSGEIYS-VSVSNALITMYAKAGNITSASRAFDL 473
Query: 302 MPM-RNVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDR 359
+ R+ VSW +MI +A +G E + LFE M+ G+ P+ T+VGV + C HAGLV++
Sbjct: 474 IRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQ 533
Query: 360 GRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSAC 419
GR+ FD M +++P L HY C+VDL GR G ++EA + I MP+EP WG+LLSAC
Sbjct: 534 GRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSAC 593
Query: 420 RTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPG 479
R H + ++ ++AA+ L+ +EP NSG + L+N+Y+ +W+E K+R M++G +KK G
Sbjct: 594 RVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQG 653
Query: 480 QS 481
S
Sbjct: 654 FS 655
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 112/468 (23%), Positives = 196/468 (41%), Gaps = 71/468 (15%)
Query: 28 IHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPP 87
+H ++ GL S ++ + ++V + +A ++F+ P +N+++ A S
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 88 FQQCFHLFSLMRNARAIS------------------------------PDYFTFPSLLKA 117
F + ++S P FT ++L +
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 118 ASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVW 177
+ R + G+ +H+ + LG + V ++ +YA C A VFD M RD+ W
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW 215
Query: 178 NLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKG-F 236
N MI + +VG+++ + F +M +R +V+WN MIS + + AL +F +ML
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLL 275
Query: 237 EPDDATLVTVLPVCARLGAADVGEWIHSYANDKGF------LRDIVSVGN---------- 280
PD TL +VL CA L +G+ IHS+ GF L ++S+ +
Sbjct: 276 SPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARR 335
Query: 281 ----------------SLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGE 324
+L+D Y K G+ ++F + R+VV+W AMI G +G
Sbjct: 336 LIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYG 395
Query: 325 VGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCV 383
+ LF MV G PN T +L+ + + G+++ S AVK + + +
Sbjct: 396 EAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGS-AVKSGEIYSVSVSNAL 454
Query: 384 VDLLGRCGHV---REALDLIRSMPMEPTAALWGALLSACRTHGDREIA 428
+ + + G++ A DLIR E W +++ A HG E A
Sbjct: 455 ITMYAKAGNITSASRAFDLIRC---ERDTVSWTSMIIALAQHGHAEEA 499
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 151/338 (44%), Gaps = 45/338 (13%)
Query: 105 SPDYFTFPSLLKAASNLRDFQLGQS--------LHAQVTTLGFARHGPVRVGVVELYANC 156
+P + +LL+ +NL + +S +H +V G + ++ +Y+
Sbjct: 3 APVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKT 62
Query: 157 ERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLA 216
A K+FDEM R WN ++ Y K G++++ E F ++ R VSW MI
Sbjct: 63 GYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYK 122
Query: 217 KGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIV 276
+ +A+ + +M+++G EP TL VL A + G+ +HS+ G LR V
Sbjct: 123 NIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLG-LRGNV 181
Query: 277 SVGNSLVDFYCKCGNP--------------------------QAG-----LSVFNEMPMR 305
SV NSL++ Y KCG+P Q G ++ F +M R
Sbjct: 182 SVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAER 241
Query: 306 NVVSWNAMISGMAYNGMGEVGVGLFEDMVRG--VTPNDSTFVGVLACCAHAGLVDRGREL 363
++V+WN+MISG G + +F M+R ++P+ T VL+ CA+ + G+++
Sbjct: 242 DIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQI 301
Query: 364 FDSMAVK-FQLLPKLEHYGCVVDLLGRCGHVREALDLI 400
+ F + + ++ + RCG V A LI
Sbjct: 302 HSHIVTTGFDISGIV--LNALISMYSRCGGVETARRLI 337
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 78/167 (46%), Gaps = 5/167 (2%)
Query: 280 NSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVT 338
N+++ Y K G+ + F+++P R+ VSW MI G G + + DMV+ G+
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 339 PNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALD 398
P T VLA A ++ G+++ S VK L + ++++ +CG A
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVH-SFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKF 202
Query: 399 LIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELV--NVEPWNS 443
+ M + ++ W A+++ G ++A +++ ++ WNS
Sbjct: 203 VFDRMVVRDISS-WNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNS 248
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 265 bits (678), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 152/436 (34%), Positives = 237/436 (54%), Gaps = 22/436 (5%)
Query: 60 ATRVFNHSPNPNIILFNSII-------KACSLSPPFQQCFHLFSLMRNARAISPDYFTFP 112
A +VF+ P ++I ++I + S F++ L I P+ FTF
Sbjct: 46 AHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCL--------GIRPNEFTFG 97
Query: 113 SLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRER 172
+++ +++ RD +LG+ LH +G A + V V+ Y + DA + FD+ R+
Sbjct: 98 TVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDP 157
Query: 173 DVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREML 232
+V+ +I GY K E E L LFR M +RSVV+WN +I ++ + EEA+ F +ML
Sbjct: 158 NVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDML 217
Query: 233 EKGFE-PDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGN 291
+G P+++T + + + + G+ IH+ A R V V NSL+ FY KCGN
Sbjct: 218 REGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGN 277
Query: 292 PQAGLSVFN--EMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRGVT--PNDSTFVGV 347
+ L FN E RN+VSWN+MI G A+NG GE V +FE MV+ PN+ T +GV
Sbjct: 278 MEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGV 337
Query: 348 LACCAHAGLVDRGRELFDSMAVKFQ--LLPKLEHYGCVVDLLGRCGHVREALDLIRSMPM 405
L C HAGL+ G F+ + L +LEHY C+VD+L R G +EA +LI+SMP+
Sbjct: 338 LFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPL 397
Query: 406 EPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKV 465
+P W ALL C+ H ++ +A++AA +++ ++P + +V+LSN Y+ W V +
Sbjct: 398 DPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLI 457
Query: 466 RVLMREGHIKKVPGQS 481
R M+E +K+ G S
Sbjct: 458 RRKMKETGLKRFTGCS 473
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 34/208 (16%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
Q+H + L+ GL + + + ++ L + A R F+ + +PN++ ++I
Sbjct: 114 QLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKH 173
Query: 87 PFQQCFHLFSLM-------------------RNARAIS------------PDYFTFPSLL 115
F++ LF M RN A++ P+ TFP +
Sbjct: 174 EFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAI 233
Query: 116 KAASNLRDFQLGQSLHA-QVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRE--R 172
A SN+ G+S+HA + LG + V ++ Y+ C M D+ F+++ E R
Sbjct: 234 TAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQR 293
Query: 173 DVIVWNLMIQGYCKVGELETGLELFRRM 200
+++ WN MI GY G E + +F +M
Sbjct: 294 NIVSWNSMIWGYAHNGRGEEAVAMFEKM 321
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 265 bits (678), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 156/475 (32%), Positives = 251/475 (52%), Gaps = 13/475 (2%)
Query: 19 AKTRTQLTQIHAHF--LRHGLHHSNQI-------LAHFISVCASLHRVPYATRVFNHSPN 69
+K + L ++A LR + QI L+ IS A+ RV + +F+ N
Sbjct: 222 SKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSN 281
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQS 129
+IL+NS+I + + LF+ MRN D T +++ A L + G+
Sbjct: 282 RCVILWNSMISGYIANNMKMEALVLFNEMRNE--TREDSRTLAAVINACIGLGFLETGKQ 339
Query: 130 LHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGE 189
+H G V ++++Y+ C +A K+F E+ D I+ N MI+ Y G
Sbjct: 340 MHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGR 399
Query: 190 LETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPV 249
++ +F R+ ++S++SWN M + ++ E L F +M + D+ +L +V+
Sbjct: 400 IDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISA 459
Query: 250 CARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVS 309
CA + + ++GE + + A G D V V +SL+D YCKCG + G VF+ M + V
Sbjct: 460 CASISSLELGEQVFARATIVGLDSDQV-VSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVP 518
Query: 310 WNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMA 368
WN+MISG A NG G + LF+ M V G+ P TF+ VL C + GLV+ GR+LF+SM
Sbjct: 519 WNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMK 578
Query: 369 VKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIA 428
V +P EH+ C+VDLL R G+V EA++L+ MP + ++W ++L C +G + +
Sbjct: 579 VDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMG 638
Query: 429 EIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQSAT 483
+ AA++++ +EP NS +V LS I+A W+ VR LMRE ++ K PG S T
Sbjct: 639 KKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSWT 693
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 182/408 (44%), Gaps = 40/408 (9%)
Query: 48 ISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPD 107
+S A + A R+FN P +++ NS++ L+ ++ LF + S D
Sbjct: 131 VSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELN----FSAD 186
Query: 108 YFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFD 167
T ++LKA + L + G+ +HAQ+ G + +V +YA C + A + +
Sbjct: 187 AITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLE 246
Query: 168 EMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVL 227
++RE D + +I GY G + LF R +R V+ WN MIS + EALVL
Sbjct: 247 QIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVL 306
Query: 228 FREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYC 287
F EM + E D TL V+ C LG + G+ +H +A G + DIV V ++L+D Y
Sbjct: 307 FNEMRNETRE-DSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIV-VASTLLDMYS 364
Query: 288 KCGNPQAGLSVFNE-------------------------------MPMRNVVSWNAMISG 316
KCG+P +F+E + ++++SWN+M +G
Sbjct: 365 KCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNG 424
Query: 317 MAYNGMGEVGVGLFEDMVRGVTPNDS-TFVGVLACCAHAGLVDRGRELFDSMAVKFQLLP 375
+ NG + F M + P D + V++ CA ++ G ++F + A L
Sbjct: 425 FSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVF-ARATIVGLDS 483
Query: 376 KLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHG 423
++DL +CG V + +M ++ W +++S T+G
Sbjct: 484 DQVVSSSLIDLYCKCGFVEHGRRVFDTM-VKSDEVPWNSMISGYATNG 530
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 147/363 (40%), Gaps = 78/363 (21%)
Query: 149 VVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSW 208
++++Y+ +MG A +FDEM +R+ WN MI+GY GE T L F M +R SW
Sbjct: 68 LLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSW 127
Query: 209 NLMISCLAKGKK-------------------------------EEEALVLFREMLEKGFE 237
N+++S AK + EEAL LF+E+ F
Sbjct: 128 NVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFS 184
Query: 238 PDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCG------- 290
D TL TVL CA L A G+ IH+ G D + +SLV+ Y KCG
Sbjct: 185 ADAITLTTVLKACAELEALKCGKQIHAQILIGGVECD-SKMNSSLVNVYAKCGDLRMASY 243
Query: 291 --------------------------NPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGE 324
N GL F+ R V+ WN+MISG N M
Sbjct: 244 MLEQIREPDDHSLSALISGYANCGRVNESRGL--FDRKSNRCVILWNSMISGYIANNMKM 301
Query: 325 VGVGLFEDMVRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVV 384
+ LF +M + T V+ C G ++ G+++ A KF L+ + ++
Sbjct: 302 EALVLFNEMRNETREDSRTLAAVINACIGLGFLETGKQM-HCHACKFGLIDDIVVASTLL 360
Query: 385 DLLGRCGHVREALDLIRSMPMEPTAALWGAL---LSACRTHGDREIAE-IAAKELVNVEP 440
D+ +CG EA L + T L + S R + + E I K L++
Sbjct: 361 DMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLIS--- 417
Query: 441 WNS 443
WNS
Sbjct: 418 WNS 420
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 89/189 (47%), Gaps = 11/189 (5%)
Query: 269 KGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVG 328
KGFL IV V N L+ Y + G ++F+EMP RN SWN MI G Y GE G
Sbjct: 55 KGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEG--YMNSGEKGTS 112
Query: 329 L-FEDMVRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLL 387
L F DM+ + ++ V++ A AG + R LF++M K + +G +++
Sbjct: 113 LRFFDMMP--ERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILN-- 168
Query: 388 GRCGHVREALDLIRSMPMEPTAALWGALLSAC-RTHGDREIAEIAAKELVNVEPWNSGHH 446
G+ EAL L + + A +L AC + +I A+ L+ +S +
Sbjct: 169 ---GYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMN 225
Query: 447 VLLSNIYAE 455
L N+YA+
Sbjct: 226 SSLVNVYAK 234
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 265 bits (676), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 155/429 (36%), Positives = 239/429 (55%), Gaps = 15/429 (3%)
Query: 71 NIILFNSIIKACSLSPP-------FQQCFHLFSLMRNARAISP-DYFTFPSLLKAASNLR 122
+ LFN +++ SL + Q L L + +++ P D FT+ LLKA+SN R
Sbjct: 76 KLFLFNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSNPR 135
Query: 123 --DFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLM 180
LG LH LGF H V+ +V +Y M DA KVFDEM ER+ + WN+M
Sbjct: 136 FPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVM 195
Query: 181 IQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLE-KGFEPD 239
I G +G+ E L +M +R+VVSW +I A+ K +EA++LF M+ +P+
Sbjct: 196 ITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPN 255
Query: 240 DATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVF 299
+ T++ +LP LG + +H+Y +GF+ + V NSL+D Y KCG Q+ F
Sbjct: 256 EITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFF 315
Query: 300 NEMP--MRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGL 356
E+P +N+VSW MIS A +GMG+ V +F+DM R G+ PN T + VL C+H GL
Sbjct: 316 IEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGL 375
Query: 357 VDRG-RELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGAL 415
+ E F++M ++++ P ++HYGC+VD+L R G + EA + +P+E A +W L
Sbjct: 376 AEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRML 435
Query: 416 LSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIK 475
L AC + D E+AE ++L+ +E + G +VL+SNI+ R+ + ++ R M +
Sbjct: 436 LGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVA 495
Query: 476 KVPGQSATT 484
K+PG S T
Sbjct: 496 KLPGHSQVT 504
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 36/252 (14%)
Query: 68 PNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLG 127
PN ++ + +II + ++ LFS M AI P+ T ++L A NL D ++
Sbjct: 216 PNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMC 275
Query: 128 QSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKV 187
S+HA V GF C D+ V N +I Y K
Sbjct: 276 GSVHAYVGKRGF--------------VPC----------------DIRVTNSLIDAYAKC 305
Query: 188 GELETGLELFRRM--GDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVT 245
G +++ + F + G +++VSW MIS A +EA+ +F++M G +P+ T+++
Sbjct: 306 GCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMIS 365
Query: 246 VLPVCARLGAA--DVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMP 303
VL C+ G A + E+ ++ N+ D+ G LVD + G + + E+P
Sbjct: 366 VLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYG-CLVDMLRRKGRLEEAEKIALEIP 424
Query: 304 M-RNVVSWNAMI 314
+ V W ++
Sbjct: 425 IEEKAVVWRMLL 436
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 156/476 (32%), Positives = 249/476 (52%), Gaps = 21/476 (4%)
Query: 16 LHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSP--NPNII 73
LH T + L + +L SN + + AS + A ++F+ P + +
Sbjct: 28 LHAVLTTSGLKKAPRSYL------SNALFQFY----ASSGEMVTAQKLFDEIPLSEKDNV 77
Query: 74 LFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQ 133
+ +++ + S LF MR R + D + L + L D Q H
Sbjct: 78 DWTTLLSSFSRYGLLVNSMKLFVEMRRKR-VEIDDVSVVCLFGVCAKLEDLGFAQQGHGV 136
Query: 134 VTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETG 193
+G V ++++Y C + + ++F+E+ E+ V+ W +++ K LE G
Sbjct: 137 AVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERG 196
Query: 194 LELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEK-GFEPDDATLVTVLPVCAR 252
E+F M +R+ V+W +M++ E L L EM+ + G + TL ++L CA+
Sbjct: 197 REVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQ 256
Query: 253 LGAADVGEWIHSYANDKGFL------RDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRN 306
G VG W+H YA K + D V VG +LVD Y KCGN + ++VF M RN
Sbjct: 257 SGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRN 316
Query: 307 VVSWNAMISGMAYNGMGEVGVGLFEDMVRGVTPNDSTFVGVLACCAHAGLVDRGRELFDS 366
VV+WNA+ SG+A +G G + + +F M+R V P+D TF VL+ C+H+G+VD G F S
Sbjct: 317 VVTWNALFSGLAMHGKGRMVIDMFPQMIREVKPDDLTFTAVLSACSHSGIVDEGWRCFHS 376
Query: 367 MAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDRE 426
+ + L PK++HY C+VDLLGR G + EA L+R MP+ P + G+LL +C HG E
Sbjct: 377 LRF-YGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVE 435
Query: 427 IAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQSA 482
IAE +EL+ + P N+ + +L+SN+Y E R D + +R +R+ I+K+PG S+
Sbjct: 436 IAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSS 491
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 76/176 (43%), Gaps = 12/176 (6%)
Query: 250 CARLGAADVGEWIHSYANDKGFLRDIVS-VGNSLVDFYCKCGNPQAGLSVFNEMPM--RN 306
CA G+ +H+ G + S + N+L FY G +F+E+P+ ++
Sbjct: 16 CAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKD 75
Query: 307 VVSWNAMISGMAYNGMGEVGVGLFEDMVRG-VTPNDSTFVGVLACCAH---AGLVDRGRE 362
V W ++S + G+ + LF +M R V +D + V + CA G +G
Sbjct: 76 NVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGH- 134
Query: 363 LFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSA 418
+AVK +L ++ ++D+ G+CG V E + + E + W +L
Sbjct: 135 ---GVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELE-EKSVVSWTVVLDT 186
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/451 (33%), Positives = 256/451 (56%), Gaps = 39/451 (8%)
Query: 36 GLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNII---LFNSIIKACSLSPPFQQCF 92
L H+ ++L+ I++ + R+ A ++F+ + +++ ++ ++ S + +
Sbjct: 162 SLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDAL 221
Query: 93 HLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVEL 152
++ M I P F+ LKA +L+D ++G+ +HAQ+
Sbjct: 222 IVYVDML-CSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIV----------------- 263
Query: 153 YANCERMGDAGKVFDEMRER-DVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLM 211
+ +E+ D +V+N++++ Y + G + ++F M +R+VV+WN +
Sbjct: 264 ---------------KRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSL 308
Query: 212 ISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGF 271
IS L+K + E LFR+M E+ ATL T+LP C+R+ A G+ IH+ K
Sbjct: 309 ISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQIL-KSK 367
Query: 272 LRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFE 331
+ V + NSL+D Y KCG + VF+ M +++ SWN M++ A NG E + LFE
Sbjct: 368 EKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFE 427
Query: 332 DMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRC 390
M+ GV P+ TFV +L+ C+ GL + G LF+ M +F++ P LEHY C+VD+LGR
Sbjct: 428 WMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRA 487
Query: 391 GHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLS 450
G ++EA+ +I +MP +P+A++WG+LL++CR HG+ + EIAAKEL +EP N G++V++S
Sbjct: 488 GKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVS 547
Query: 451 NIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
NIYA+ WD V+K+R +M++ +KK G S
Sbjct: 548 NIYADAKMWDNVDKIREMMKQRGVKKEAGCS 578
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 262 bits (670), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 157/462 (33%), Positives = 237/462 (51%), Gaps = 46/462 (9%)
Query: 27 QIHAHFLRHGLH---HSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACS 83
QIH + G + + L HF VC A +VF P +++ + II +
Sbjct: 127 QIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRN---ACKVFGEMPVRDVVSWTGIITGFT 183
Query: 84 LSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHG 143
+ +++ FS M + P+ T+ +L ++ + LG+ +H +
Sbjct: 184 RTGLYKEALDTFSKMD----VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISL 239
Query: 144 PVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDR 203
++++Y CE++ DA +VF GELE +
Sbjct: 240 ETGNALIDMYVKCEQLSDAMRVF---------------------GELE----------KK 268
Query: 204 SVVSWNLMISCLAKGKKEEEALVLFREM-LEKGFEPDDATLVTVLPVCARLGAADVGEWI 262
VSWN MIS L ++ +EA+ LF M G +PD L +VL CA LGA D G W+
Sbjct: 269 DKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWV 328
Query: 263 HSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGM 322
H Y G D +G ++VD Y KCG + L +FN + +NV +WNA++ G+A +G
Sbjct: 329 HEYILTAGIKWD-THIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGH 387
Query: 323 GEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVK-FQLLPKLEHY 380
G + FE+MV+ G PN TF+ L C H GLVD GR F M + + L PKLEHY
Sbjct: 388 GLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHY 447
Query: 381 GCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGD-REIAEIAAKELVNVE 439
GC++DLL R G + EAL+L+++MP++P + GA+LSAC+ G E+ + +++E
Sbjct: 448 GCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIE 507
Query: 440 PWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
+SG +VLLSNI+A RWD+V ++R LM+ I KVPG S
Sbjct: 508 FEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSS 549
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 5/215 (2%)
Query: 204 SVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIH 263
S S+N ++S A K + ++ + GF PD T V C + G+ IH
Sbjct: 70 SSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIH 129
Query: 264 SYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMG 323
GF DI V NSLV FY CG + VF EMP+R+VVSW +I+G G+
Sbjct: 130 GIVTKMGFYDDIY-VQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLY 188
Query: 324 EVGVGLFEDMVRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCV 383
+ + F M V PN +T+V VL G + G+ + + +K L LE +
Sbjct: 189 KEALDTFSKM--DVEPNLATYVCVLVSSGRVGCLSLGKGI-HGLILKRASLISLETGNAL 245
Query: 384 VDLLGRCGHVREALDLIRSMPMEPTAALWGALLSA 418
+D+ +C + +A+ + + + + W +++S
Sbjct: 246 IDMYVKCEQLSDAMRVFGELEKKDKVS-WNSMISG 279
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 262 bits (669), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 156/458 (34%), Positives = 242/458 (52%), Gaps = 35/458 (7%)
Query: 28 IHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPP 87
IH +++GL + + + + A L + A +VF+ P N +L+ ++K
Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSK 190
Query: 88 FQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGP-VR 146
+ F LF LMR+ ++ D T L+KA N+ ++G+ +H F ++
Sbjct: 191 DPEVFRLFCLMRDT-GLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQ 249
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
++++Y C + +A K+F ET + DR+VV
Sbjct: 250 ASIIDMYVKCRLLDNARKLF------------------------ETSV-------DRNVV 278
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA 266
W +IS AK ++ EA LFR+ML + P+ TL +L C+ LG+ G+ +H Y
Sbjct: 279 MWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYM 338
Query: 267 NDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVG 326
G D V+ S +D Y +CGN Q +VF+ MP RNV+SW++MI+ NG+ E
Sbjct: 339 IRNGIEMDAVNF-TSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEA 397
Query: 327 VGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVD 385
+ F M + V PN TFV +L+ C+H+G V G + F+SM + ++P+ EHY C+VD
Sbjct: 398 LDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVD 457
Query: 386 LLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGH 445
LLGR G + EA I +MP++P A+ WGALLSACR H + ++A A++L+++EP S
Sbjct: 458 LLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSV 517
Query: 446 HVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQSAT 483
+VLLSNIYA+ W+ V VR M +K GQSAT
Sbjct: 518 YVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSAT 555
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 173/419 (41%), Gaps = 39/419 (9%)
Query: 10 RRILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSP- 68
R +L++L AKT Q+HA + HG + + + +R+ +AT FN P
Sbjct: 8 RALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPC 67
Query: 69 -NPNIILFNSIIKACSLSPP--FQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQ 125
N +N+I+ S S + L++ MR D F +KA L +
Sbjct: 68 WKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRR-HCDGVDSFNLVFAIKACVGLGLLE 126
Query: 126 LGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYC 185
G +H G + V +VE+YA M A KVFDE+ R+ ++W ++++GY
Sbjct: 127 NGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYL 186
Query: 186 KVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVT 245
K K+ E LF M + G D TL+
Sbjct: 187 KYS-------------------------------KDPEVFRLFCLMRDTGLALDALTLIC 215
Query: 246 VLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR 305
++ C + A VG+ +H + + F+ + S++D Y KC +F R
Sbjct: 216 LVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDR 275
Query: 306 NVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELF 364
NVV W +ISG A LF M+R + PN T +L C+ G + G+ +
Sbjct: 276 NVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVH 335
Query: 365 DSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHG 423
M ++ + ++ +D+ RCG+++ A + MP E W ++++A +G
Sbjct: 336 GYM-IRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMP-ERNVISWSSMINAFGING 392
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 261 bits (668), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 157/476 (32%), Positives = 245/476 (51%), Gaps = 38/476 (7%)
Query: 12 ILSLLHGA---KTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFN--H 66
+++L+ A K+ L +HA +R G+ + +IS + A VF
Sbjct: 156 VMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAID 215
Query: 67 SPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQL 126
+ ++ +NS+ KA S+ F L+ LM PD TF +L + N
Sbjct: 216 RGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREE-FKPDLSTFINLAASCQNPETLTQ 274
Query: 127 GQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCK 186
G+ +H+ LG ++D+ N I Y K
Sbjct: 275 GRLIHSHAIHLG-------------------------------TDQDIEAINTFISMYSK 303
Query: 187 VGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTV 246
+ + LF M R+ VSW +MIS A+ +EAL LF M++ G +PD TL+++
Sbjct: 304 SEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSL 363
Query: 247 LPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRN 306
+ C + G+ + G+WI + A+ G RD V + N+L+D Y KCG+ +F+ P +
Sbjct: 364 ISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKT 423
Query: 307 VVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFD 365
VV+W MI+G A NG+ + LF M+ PN TF+ VL CAH+G +++G E F
Sbjct: 424 VVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFH 483
Query: 366 SMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDR 425
M + + P L+HY C+VDLLGR G + EAL+LIR+M +P A +WGALL+AC+ H +
Sbjct: 484 IMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNV 543
Query: 426 EIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
+IAE AA+ L N+EP + +V ++NIYA WD ++R +M++ +IKK PG+S
Sbjct: 544 KIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGES 599
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 137/338 (40%), Gaps = 38/338 (11%)
Query: 94 LFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELY 153
LF M+ P+ FTFP + KA + L D + +HA + F V V+++
Sbjct: 39 LFREMKRG-GFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMF 97
Query: 154 ANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMIS 213
C + A KVF+ M ERD WN M+ G+C+ G + LFR M + ++ +
Sbjct: 98 VKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVM 157
Query: 214 CLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLR 273
L + E++L L M G RLG DV
Sbjct: 158 TLIQSASFEKSLKLLEAMHAVGI---------------RLG-VDVQ-------------- 187
Query: 274 DIVSVGNSLVDFYCKCGNPQAGLSVFNEMPM--RNVVSWNAMISGMAYNGMGEVGVGLFE 331
V+V N+ + Y KCG+ + VF + R VVSWN+M + G GL+
Sbjct: 188 --VTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYC 245
Query: 332 DMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRC 390
M+R P+ STF+ + A C + + +GR L S A+ +E + + +
Sbjct: 246 LMLREEFKPDLSTFINLAASCQNPETLTQGR-LIHSHAIHLGTDQDIEAINTFISMYSKS 304
Query: 391 GHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIA 428
A L+ + T W ++S GD + A
Sbjct: 305 EDTCSA-RLLFDIMTSRTCVSWTVMISGYAEKGDMDEA 341
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 114/236 (48%), Gaps = 14/236 (5%)
Query: 196 LFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGA 255
L+R G SV +WNL I E+L+LFREM GFEP++ T V CARL
Sbjct: 8 LYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL-- 65
Query: 256 ADVG--EWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAM 313
ADVG E +H++ F D+ VG + VD + KC + VF MP R+ +WNAM
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVF-VGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAM 124
Query: 314 ISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSM---AV 369
+SG +G + LF +M + +TP+ T + ++ + ++ +L ++M +
Sbjct: 125 LSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLI----QSASFEKSLKLLEAMHAVGI 180
Query: 370 KFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPM-EPTAALWGALLSACRTHGD 424
+ + ++ + G+CG + A + ++ + T W ++ A G+
Sbjct: 181 RLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGE 236
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 260 bits (665), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 157/466 (33%), Positives = 250/466 (53%), Gaps = 46/466 (9%)
Query: 24 QLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACS 83
Q Q+H ++ GL + I + + + A +VF+ P +++ N++I S
Sbjct: 547 QGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYS 606
Query: 84 LSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHG 143
++ LF M R ++P TF ++++A LG H Q+T GF+ G
Sbjct: 607 -QNNLEEAVVLFQEMLT-RGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEG 664
Query: 144 P-VRVGVVELYANCERMGDAGKVFDEMRE-RDVIVWNLMIQGYCKVGELETGLELFRRMG 201
+ + ++ +Y N M +A +F E+ + +++W M+ G+ + G E
Sbjct: 665 EYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYE---------- 714
Query: 202 DRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEW 261
EAL ++EM G PD AT VTVL VC+ L + G
Sbjct: 715 ---------------------EALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRA 753
Query: 262 IHSY----ANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR-NVVSWNAMISG 316
IHS A+D L ++ S N+L+D Y KCG+ + VF+EM R NVVSWN++I+G
Sbjct: 754 IHSLIFHLAHD---LDELTS--NTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLING 808
Query: 317 MAYNGMGEVGVGLFEDMVRG-VTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLP 375
A NG E + +F+ M + + P++ TF+GVL C+HAG V GR++F+ M ++ +
Sbjct: 809 YAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEA 868
Query: 376 KLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKEL 435
+++H C+VDLLGR G+++EA D I + ++P A LW +LL ACR HGD EI+A++L
Sbjct: 869 RVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKL 928
Query: 436 VNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
+ +EP NS +VLLSNIYA + W++ +R +MR+ +KKVPG S
Sbjct: 929 IELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYS 974
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 186/413 (45%), Gaps = 42/413 (10%)
Query: 28 IHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKA-CSLSP 86
+H+ L G+ ++ + + A +V YA + F+ ++ +NS++ S+
Sbjct: 82 VHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDF-LEKDVTAWNSMLSMYSSIGK 140
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
P + SL N I P+ FTF +L + + + G+ +H + +G R+
Sbjct: 141 PGKVLRSFVSLFENQ--IFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCG 198
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDR--- 203
+V++YA C+R+ DA +VF+ + + + + W + GY K G E + +F RM D
Sbjct: 199 GALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHR 258
Query: 204 --------------------------------SVVSWNLMISCLAKGKKEEEALVLFREM 231
VV+WN+MIS K E A+ F M
Sbjct: 259 PDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNM 318
Query: 232 LEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGN 291
+ + +TL +VL + D+G +H+ A G +I VG+SLV Y KC
Sbjct: 319 RKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIY-VGSSLVSMYSKCEK 377
Query: 292 PQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLAC 350
+A VF + +N V WNAMI G A+NG + LF DM G +D TF +L+
Sbjct: 378 MEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLST 437
Query: 351 CAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSM 403
CA + ++ G + F S+ +K +L L +VD+ +CG + +A + M
Sbjct: 438 CAASHDLEMGSQ-FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 181/411 (44%), Gaps = 39/411 (9%)
Query: 28 IHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPP 87
+HA ++ GL + + + +S+ + ++ A +VF N + +N++I+ + +
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGE 408
Query: 88 FQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRV 147
+ LF M+++ + D FTF SLL + D ++G H+ + A+
Sbjct: 409 SHKVMELFMDMKSS-GYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAK------ 461
Query: 148 GVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVS 207
++ V N ++ Y K G LE ++F RM DR V+
Sbjct: 462 -------------------------NLFVGNALVDMYAKCGALEDARQIFERMCDRDNVT 496
Query: 208 WNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYAN 267
WN +I + + E EA LF+ M G D A L + L C + G+ +H +
Sbjct: 497 WNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSV 556
Query: 268 DKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGV 327
G RD+ G+SL+D Y KCG + VF+ +P +VVS NA+I+G + N + E V
Sbjct: 557 KCGLDRDL-HTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLEEAVV 615
Query: 328 GLFEDMVRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLL 387
E + RGV P++ TF ++ C + G + F K + E+ G + LL
Sbjct: 616 LFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQ-FHGQITKRGFSSEGEYLG--ISLL 672
Query: 388 GRCGHVR---EALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKEL 435
G + R EA L + + LW ++S +G E A KE+
Sbjct: 673 GMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEM 723
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 157/358 (43%), Gaps = 35/358 (9%)
Query: 48 ISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPD 107
I+ L ++ A +F +P+++ +N +I F MR + ++
Sbjct: 268 INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKS-SVKST 326
Query: 108 YFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFD 167
T S+L A + + LG +HA+ LG A + V +V +Y+ CE+M A KVF+
Sbjct: 327 RSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFE 386
Query: 168 EMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVL 227
+ E++ + WN MI+GY GE +E L
Sbjct: 387 ALEEKNDVFWNAMIRGYAHNGESHKVME-------------------------------L 415
Query: 228 FREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYC 287
F +M G+ DD T ++L CA ++G HS K +++ VGN+LVD Y
Sbjct: 416 FMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLF-VGNALVDMYA 474
Query: 288 KCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVG 346
KCG + +F M R+ V+WN +I + LF+ M + G+ + +
Sbjct: 475 KCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLAS 534
Query: 347 VLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMP 404
L C H + +G+++ ++VK L L ++D+ +CG +++A + S+P
Sbjct: 535 TLKACTHVHGLYQGKQVH-CLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 172/407 (42%), Gaps = 40/407 (9%)
Query: 26 TQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLS 85
+Q H+ ++ L + + + + A + A ++F + + + +N+II +
Sbjct: 448 SQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQD 507
Query: 86 PPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPV 145
+ F LF M N I D S LKA +++ G+ +H G R
Sbjct: 508 ENESEAFDLFKRM-NLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHT 566
Query: 146 RVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSV 205
++++Y+ C + DA KVF + E V+ N +I GY +
Sbjct: 567 GSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ------------------- 607
Query: 206 VSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSY 265
EEA+VLF+EML +G P + T T++ C + + +G H
Sbjct: 608 -------------NNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQ 654
Query: 266 ANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPM-RNVVSWNAMISGMAYNGMGE 324
+GF + +G SL+ Y ++F+E+ +++V W M+SG + NG E
Sbjct: 655 ITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYE 714
Query: 325 VGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHY--G 381
+ +++M GV P+ +TFV VL C+ + GR + ++ F L L+
Sbjct: 715 EALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIH---SLIFHLAHDLDELTSN 771
Query: 382 CVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIA 428
++D+ +CG ++ + + M W +L++ +G E A
Sbjct: 772 TLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDA 818
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 132/334 (39%), Gaps = 50/334 (14%)
Query: 124 FQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQG 183
++G+++H++ LG G + +V+LYA C ++ A K FD +
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-------------- 121
Query: 184 YCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATL 243
++ V +WN M+S + K + L F + E P+ T
Sbjct: 122 ------------------EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTF 163
Query: 244 VTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMP 303
VL CAR + G IH G R+ G +LVD Y KC VF +
Sbjct: 164 SIVLSTCARETNVEFGRQIHCSMIKMGLERNSY-CGGALVDMYAKCDRISDARRVFEWIV 222
Query: 304 MRNVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRE 362
N V W + SG G+ E V +FE M G P+ FV V+ G + R
Sbjct: 223 DPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARL 282
Query: 363 LFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDL---IRSMPMEPTAALWGALLSAC 419
LF M+ P + + ++ G+ G A++ +R ++ T + G++LSA
Sbjct: 283 LFGEMSS-----PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAI 337
Query: 420 RTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIY 453
+ ++ + E + + L SNIY
Sbjct: 338 GIVANLDLGLVVHAEAIKLG--------LASNIY 363
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 107/254 (42%), Gaps = 35/254 (13%)
Query: 12 ILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILA-HFISVCASLHRVPYATRVFNHSPNP 70
I+ H ++ T TQ H + G + L + + + + A +F+ +P
Sbjct: 635 IVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSP 694
Query: 71 -NIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQS 129
+I+L+ ++ S + +++ + MR+ + PD TF ++L+ S L + G++
Sbjct: 695 KSIVLWTGMMSGHSQNGFYEEALKFYKEMRH-DGVLPDQATFVTVLRVCSVLSSLREGRA 753
Query: 130 LHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRER-DVIVWNLMIQGYCKVG 188
+H+ + L ++++YA C M + +VFDEMR R +V+ WN +I GY K G
Sbjct: 754 IHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNG 813
Query: 189 ELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLP 248
E+AL +F M + PD+ T + VL
Sbjct: 814 -------------------------------YAEDALKIFDSMRQSHIMPDEITFLGVLT 842
Query: 249 VCARLGAADVGEWI 262
C+ G G I
Sbjct: 843 ACSHAGKVSDGRKI 856
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 260 bits (665), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 143/458 (31%), Positives = 237/458 (51%), Gaps = 38/458 (8%)
Query: 27 QIHAHFLRHGLHHSN-QILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLS 85
+IH H +R + + ++ + + + V YA R+FN NI+ +N +I + +
Sbjct: 252 EIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARN 311
Query: 86 PPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPV 145
F F M + PD T +LL A++ L G+++H GF H +
Sbjct: 312 GRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVL 367
Query: 146 RVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSV 205
++++Y C G+L++ +F RM +++V
Sbjct: 368 ETALIDMYGEC-------------------------------GQLKSAEVIFDRMAEKNV 396
Query: 206 VSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSY 265
+SWN +I+ + K AL LF+E+ + PD T+ ++LP A + G IH+Y
Sbjct: 397 ISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAY 456
Query: 266 ANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEV 325
+ + + + NSLV Y CG+ + FN + +++VVSWN++I A +G G +
Sbjct: 457 IVKSRYWSNTI-ILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRI 515
Query: 326 GVGLFEDMVRG-VTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVV 384
V LF +M+ V PN STF +LA C+ +G+VD G E F+SM ++ + P +EHYGC++
Sbjct: 516 SVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCML 575
Query: 385 DLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSG 444
DL+GR G+ A + MP PTA +WG+LL+A R H D IAE AA+++ +E N+G
Sbjct: 576 DLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTG 635
Query: 445 HHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQSA 482
+VLL N+YAE RW++V ++++LM I + +S
Sbjct: 636 CYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRST 673
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 176/386 (45%), Gaps = 45/386 (11%)
Query: 60 ATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAAS 119
A ++F+ + L+N +IK + + + +S M A + D FT+P ++K+ +
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFA-GVKADTFTYPFVIKSVA 141
Query: 120 NLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNL 179
+ + G+ +HA V LGF V ++ LY DA KVF+EM ERD++ WN
Sbjct: 142 GISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNS 201
Query: 180 MIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPD 239
MI GY +G+ G +L+LF+EML+ GF+PD
Sbjct: 202 MISGYLALGD---GF----------------------------SSLMLFKEMLKCGFKPD 230
Query: 240 DATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVF 299
+ ++ L C+ + + +G+ IH +A V V S++D Y K G +F
Sbjct: 231 RFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIF 290
Query: 300 NEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR--GVTPNDSTFVGVLACCAHAGLV 357
N M RN+V+WN MI A NG F+ M G+ P+ T + +L A +
Sbjct: 291 NGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLP----ASAI 346
Query: 358 DRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLS 417
GR + A++ LP + ++D+ G CG ++ A ++I E W ++++
Sbjct: 347 LEGRTI-HGYAMRRGFLPHMVLETALIDMYGECGQLKSA-EVIFDRMAEKNVISWNSIIA 404
Query: 418 ACRTHGDREIAEIAAKELVNVEPWNS 443
A +G +A EL E W+S
Sbjct: 405 AYVQNGK----NYSALELFQ-ELWDS 425
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 33/221 (14%)
Query: 144 PVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDR 203
P + +A+ M DA ++FDEM + D +WN+MI+G+ G
Sbjct: 65 PALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCG--------------- 109
Query: 204 SVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIH 263
L I EA+ + M+ G + D T V+ A + + + G+ IH
Sbjct: 110 ------LYI----------EAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIH 153
Query: 264 SYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMG 323
+ GF+ D V V NSL+ Y K G VF EMP R++VSWN+MISG G G
Sbjct: 154 AMVIKLGFVSD-VYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDG 212
Query: 324 EVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGREL 363
+ LF++M++ G P+ + + L C+H G+E+
Sbjct: 213 FSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEI 253
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 260 bits (665), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 142/456 (31%), Positives = 229/456 (50%), Gaps = 2/456 (0%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
Q+H +R G + I+ + A +VF+ +++ +NS+I S S
Sbjct: 153 QVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSG 212
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
F+ C ++ M P+ T S+ +A D G +H ++ +
Sbjct: 213 SFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLC 272
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
V+ YA C + A +FDEM E+D + + +I GY G ++ + LF M +
Sbjct: 273 NAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLS 332
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA 266
+WN MIS L + EE + FREM+ G P+ TL ++LP G+ IH++A
Sbjct: 333 TWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFA 392
Query: 267 NDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVG 326
G +I V S++D Y K G VF+ R++++W A+I+ A +G +
Sbjct: 393 IRNGADNNIY-VTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSA 451
Query: 327 VGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVD 385
LF+ M G P+D T VL+ AH+G D + +FDSM K+ + P +EHY C+V
Sbjct: 452 CSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVS 511
Query: 386 LLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGH 445
+L R G + +A++ I MP++P A +WGALL+ GD EIA A L +EP N+G+
Sbjct: 512 VLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGN 571
Query: 446 HVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
+ +++N+Y + RW+E E VR M+ +KK+PG S
Sbjct: 572 YTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTS 607
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 186/416 (44%), Gaps = 21/416 (5%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
Q+HA + + N + + IS R A VF+ N +N+++ A +
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSRE 102
Query: 87 PFQQCFHLF-----SLMRNARAISPDYFTFPSLLKAASNLRDFQLG---QSLHAQVTTLG 138
+ F LF S ++ A PD + +LKA S DF LG + +H V G
Sbjct: 103 MYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGG 162
Query: 139 FARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFR 198
F V G++ Y C+ + A KVFDEM ERDV+ WN MI GY + G E ++++
Sbjct: 163 FDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYK 222
Query: 199 RMGDRSVVSWN--LMISCLAKGKKEEE---ALVLFREMLEKGFEPDDATLVTVLPVCARL 253
M S N +IS + + L + ++M+E + D + V+ A+
Sbjct: 223 AMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKC 282
Query: 254 GAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAM 313
G+ D + ++K D V+ G +++ Y G + +++F+EM + +WNAM
Sbjct: 283 GSLDYARALFDEMSEK----DSVTYG-AIISGYMAHGLVKEAMALFSEMESIGLSTWNAM 337
Query: 314 ISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQ 372
ISG+ N E + F +M+R G PN T +L ++ + G+E+ + A++
Sbjct: 338 ISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEI-HAFAIRNG 396
Query: 373 LLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIA 428
+ ++D + G + A + + A W A+++A HGD + A
Sbjct: 397 ADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIA-WTAIITAYAVHGDSDSA 451
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 170/547 (31%), Positives = 263/547 (48%), Gaps = 82/547 (14%)
Query: 8 IERRILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHS 67
+ER L LL + QL QI A L H + N I L Y++ +F+ +
Sbjct: 36 LERDFLFLLKKCISVNQLRQIQAQMLLHSVEKPN----FLIPKAVELGDFNYSSFLFSVT 91
Query: 68 PNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNAR--AISPDYFTFPSLLKAASNLRDFQ 125
PN FN +I+ L+ + SL R + + PD FT+ + A + L +
Sbjct: 92 EEPNHYSFNYMIRG--LTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIG 149
Query: 126 LGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYC 185
+G+S+H+ + +G R + ++ +YA C ++G A K+FDE+ ERD + WN MI GY
Sbjct: 150 VGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYS 209
Query: 186 KVGELETGLELFRRM-------GDRSVVSW------------------------------ 208
+ G + ++LFR+M +R++VS
Sbjct: 210 EAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTF 269
Query: 209 --NLMISCLAKGKKEEEALVLFREMLEK-------------------------------G 235
+ +IS K + A +F +M++K G
Sbjct: 270 LGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTG 329
Query: 236 FEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAG 295
PD TL TVL C +GA ++G+ I ++A++ +I V LVD Y KCG +
Sbjct: 330 VSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIY-VATGLVDMYGKCGRVEEA 388
Query: 296 LSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRGVTPNDSTFVGVLACCAHAG 355
L VF MP++N +WNAMI+ A+ G + + LF+ M V P+D TF+GVL+ C HAG
Sbjct: 389 LRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM--SVPPSDITFIGVLSACVHAG 446
Query: 356 LVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGAL 415
LV +G F M+ F L+PK+EHY ++DLL R G + EA + + P +P + A+
Sbjct: 447 LVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAI 506
Query: 416 LSACRTHGDREIAEIAAKELVNV-EPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHI 474
L AC D I E A + L+ + E N+G++V+ SN+ A+ WDE K+R LMR+ +
Sbjct: 507 LGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGV 566
Query: 475 KKVPGQS 481
K PG S
Sbjct: 567 VKTPGCS 573
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 8/203 (3%)
Query: 3 KGLQQIERRILSLL----HGAKTRT-QLTQIHAHFLRHGLHHSNQILAHFISVCASLHRV 57
+G + ER ++S+L H RT +L + A + GL S + + IS+ +
Sbjct: 227 EGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGL--STFLGSKLISMYGKCGDL 284
Query: 58 PYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKA 117
A RVFN + + + ++I S + + F LF M +SPD T ++L A
Sbjct: 285 DSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKT-GVSPDAGTLSTVLSA 343
Query: 118 ASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVW 177
++ +LG+ + + L + V G+V++Y C R+ +A +VF+ M ++ W
Sbjct: 344 CGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATW 403
Query: 178 NLMIQGYCKVGELETGLELFRRM 200
N MI Y G + L LF RM
Sbjct: 404 NAMITAYAHQGHAKEALLLFDRM 426
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 258 bits (660), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 147/423 (34%), Positives = 228/423 (53%), Gaps = 39/423 (9%)
Query: 60 ATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAAS 119
A ++F+ P N+I + ++I A S Q+ L LM + P+ +T+ S+L++ +
Sbjct: 115 AHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDN-VRPNVYTYSSVLRSCN 173
Query: 120 NLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNL 179
+ D ++ LH + G E DV V +
Sbjct: 174 GMSDVRM---LHCGIIKEGL-------------------------------ESDVFVRSA 199
Query: 180 MIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPD 239
+I + K+GE E L +F M + WN +I A+ + + AL LF+ M GF +
Sbjct: 200 LIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAE 259
Query: 240 DATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVF 299
ATL +VL C L ++G + ++ + + +D++ + N+LVD YCKCG+ + L VF
Sbjct: 260 QATLTSVLRACTGLALLELG--MQAHVHIVKYDQDLI-LNNALVDMYCKCGSLEDALRVF 316
Query: 300 NEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVD 358
N+M R+V++W+ MISG+A NG + + LFE M G PN T VGVL C+HAGL++
Sbjct: 317 NQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLE 376
Query: 359 RGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSA 418
G F SM + + P EHYGC++DLLG+ G + +A+ L+ M EP A W LL A
Sbjct: 377 DGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
Query: 419 CRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVP 478
CR + +AE AAK+++ ++P ++G + LLSNIYA +WD VE++R MR+ IKK P
Sbjct: 437 CRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEP 496
Query: 479 GQS 481
G S
Sbjct: 497 GCS 499
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 129/303 (42%), Gaps = 37/303 (12%)
Query: 14 SLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNII 73
S+L + + +H ++ GL + + I V A L A VF+ + I
Sbjct: 167 SVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAI 226
Query: 74 LFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQ 133
++NSII + + LF M+ A I+ + T S+L+A + L +LG + A
Sbjct: 227 VWNSIIGGFAQNSRSDVALELFKRMKRAGFIA-EQATLTSVLRACTGLALLELG--MQAH 283
Query: 134 VTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETG 193
V + + + + +V++Y C + DA +VF++M+ERDVI W+ MI G + G +
Sbjct: 284 VHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEA 343
Query: 194 LELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARL 253
L+LF RM G +P+ T+V VL C+
Sbjct: 344 LKLFERMK-------------------------------SSGTKPNYITIVGVLFACSHA 372
Query: 254 GAADVGEWIHSYANDKGFLRDIVSVG-NSLVDFYCKCGNPQAGLSVFNEMPMR-NVVSWN 311
G + G W + + K + D V ++D K G + + NEM + V+W
Sbjct: 373 GLLEDG-WYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWR 431
Query: 312 AMI 314
++
Sbjct: 432 TLL 434
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 258 bits (659), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 142/416 (34%), Positives = 234/416 (56%), Gaps = 7/416 (1%)
Query: 71 NIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSL 130
NI+ +N I+ + S ++ +F + + PD T S+L + + +G+ +
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHL-GFCPDQVTVSSVLPSVGDSEMLNMGRLI 274
Query: 131 HAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGEL 190
H V G + V ++++Y + +F++ + V N I G + G +
Sbjct: 275 HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 191 ETGLELFRRMGDRS----VVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTV 246
+ LE+F +++ VVSW +I+ A+ K+ EAL LFREM G +P+ T+ ++
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSM 394
Query: 247 LPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRN 306
LP C + A G H +A + L D V VG++L+D Y KCG VFN MP +N
Sbjct: 395 LPACGNIAALGHGRSTHGFAV-RVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKN 453
Query: 307 VVSWNAMISGMAYNGMGEVGVGLFEDMVRG-VTPNDSTFVGVLACCAHAGLVDRGRELFD 365
+V WN++++G + +G + + +FE ++R + P+ +F +L+ C GL D G + F
Sbjct: 454 LVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFK 513
Query: 366 SMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDR 425
M+ ++ + P+LEHY C+V+LLGR G ++EA DLI+ MP EP + +WGALL++CR +
Sbjct: 514 MMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNV 573
Query: 426 EIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
++AEIAA++L ++EP N G +VLLSNIYA + W EV+ +R M +KK PG S
Sbjct: 574 DLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCS 629
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 123/448 (27%), Positives = 206/448 (45%), Gaps = 45/448 (10%)
Query: 24 QLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACS 83
+ TQ HA L+ G + I A I+ ++ + A V P+P I F+S+I A +
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 84 LSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHG 143
+ F Q +FS M + + PD P+L K + L F++G+ +H G
Sbjct: 93 KAKLFTQSIGVFSRMF-SHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDA 151
Query: 144 PVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMG-- 201
V+ + +Y C RMGDA KVFD M ++DV+ + ++ Y + G LE + + M
Sbjct: 152 FVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 202 --DRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVG 259
+ ++VSWN ++S + +EA+V+F+++ GF PD T+ +VLP ++G
Sbjct: 212 GIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMG 271
Query: 260 EWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR-------------- 305
IH Y +G L+D + ++++D Y K G+ +S+FN+ M
Sbjct: 272 RLIHGYVIKQGLLKDKCVI-SAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSR 330
Query: 306 ---------------------NVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDST 343
NVVSW ++I+G A NG + LF +M V GV PN T
Sbjct: 331 NGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVT 390
Query: 344 FVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSM 403
+L C + + GR AV+ LL + ++D+ +CG + + + M
Sbjct: 391 IPSMLPACGNIAALGHGRST-HGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMM 449
Query: 404 PMEPTAALWGALLSACRTHGD-REIAEI 430
P + W +L++ HG +E+ I
Sbjct: 450 PTK-NLVCWNSLMNGFSMHGKAKEVMSI 476
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 258 bits (659), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 151/460 (32%), Positives = 244/460 (53%), Gaps = 16/460 (3%)
Query: 31 HFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQ 90
H L+ L+ SNQI +H V + S ++N++I++ + ++
Sbjct: 18 HLLQRFLYSSNQI--------KQIHTVLLTSNALVASRWKTKCVYNTLIRSYLTTGEYKT 69
Query: 91 CFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVV 150
LF+ M A + P+ TFPSL+KAA + G +LH Q GF V+ V
Sbjct: 70 SLALFTHML-ASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFV 128
Query: 151 ELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNL 210
Y + + K+FD++ V+ N ++ + GE++ E F+RM VVSW
Sbjct: 129 RFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTT 188
Query: 211 MISCLAKGKKEEEALVLFREMLEKG---FEPDDATLVTVLPVCARL--GAADVGEWIHSY 265
+I+ +K +AL++F EM++ P++AT V+VL CA G +G+ IH Y
Sbjct: 189 VINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGY 248
Query: 266 ANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEV 325
K + +L+D Y K G+ + L++F+++ + V +WNA+IS +A NG +
Sbjct: 249 VMSKEIILTTTLG-TALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQ 307
Query: 326 GVGLFEDMVRG-VTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVV 384
+ +FE M V PN T + +L CA + LVD G +LF S+ +++++P EHYGCVV
Sbjct: 308 ALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVV 367
Query: 385 DLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSG 444
DL+GR G + +A + I+S+P EP A++ GALL AC+ H + E+ K+L+ ++P + G
Sbjct: 368 DLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCG 427
Query: 445 HHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQSATT 484
+V LS A + W E EK+R M E I+K+P S T
Sbjct: 428 QYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYSVLT 467
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/267 (19%), Positives = 99/267 (37%), Gaps = 66/267 (24%)
Query: 28 IHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPP 87
+H L+ G + F+ + + + ++F+ NP ++ NS++ AC +
Sbjct: 108 LHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGE 167
Query: 88 FQQCFHLFS--------------------------------LMRNARA-ISPDYFTFPSL 114
F F +++N RA I+P+ TF S+
Sbjct: 168 MDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSV 227
Query: 115 LKAASNLRD--FQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRER 172
L + +N +LG+ +H V + + ++++Y + A +FD++R++
Sbjct: 228 LSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDK 287
Query: 173 DVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREML 232
V WN +I S LA + ++AL +F M
Sbjct: 288 KVCAWNAII-------------------------------SALASNGRPKQALEMFEMMK 316
Query: 233 EKGFEPDDATLVTVLPVCARLGAADVG 259
P+ TL+ +L CAR D+G
Sbjct: 317 SSYVHPNGITLLAILTACARSKLVDLG 343
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 145/466 (31%), Positives = 243/466 (52%), Gaps = 10/466 (2%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
+IHA ++ G I + + + YA +VF+ P P + +N +I
Sbjct: 55 KIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHG 114
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASN-----LRDFQLGQSLHAQVTTLGFAR 141
++ L M + D +T +LKA+++ + L + +HA++
Sbjct: 115 LVKELLLLVQRMSYS-GEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVEL 173
Query: 142 HGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMG 201
+ +V+ Y ++ A VF+ M++ +V+ MI GY G +E E+F
Sbjct: 174 DDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTK 233
Query: 202 DRSVVSWNLMISCLAK-GKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGE 260
+ +V +N M+ ++ G+ + ++ ++ M GF P+ +T +V+ C+ L + +VG+
Sbjct: 234 VKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQ 293
Query: 261 WIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYN 320
+H+ G I +G+SL+D Y KCG VF++M +NV SW +MI G N
Sbjct: 294 QVHAQIMKSGVYTHI-KMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKN 352
Query: 321 GMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEH 379
G E + LF M + PN TF+G L+ C+H+GLVD+G E+F+SM + + PK+EH
Sbjct: 353 GNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEH 412
Query: 380 YGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVE 439
Y C+VDL+GR G + +A + R+MP P + +W ALLS+C HG+ E+A IAA EL +
Sbjct: 413 YACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLN 472
Query: 440 P-WNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQSATT 484
G ++ LSN+YA +WD V K+R +M+ I K G+S T+
Sbjct: 473 ADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSWTS 518
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 157/397 (39%), Gaps = 62/397 (15%)
Query: 78 IIKACSLSPPFQQCFHL--FSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVT 135
I + S+SP H F L +N ++SP + L+ N + G+ +HA +
Sbjct: 3 IFRFTSISPRILPSNHYSTFPLKQNVSSLSPAKY-IAGALQEHINSPAPKAGKKIHADII 61
Query: 136 TLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLE 195
GF + + ++ L+ C + A +VFDE+ + + +N MI GY K G ++ L
Sbjct: 62 KTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLL 121
Query: 196 LFRRMGDRSVVSWNLMISCLAKGKKEE-EALVLFREM--------LEKGFEPDDATLVTV 246
L +RM + +S + K ++L R + ++ E DD + +
Sbjct: 122 LVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITAL 181
Query: 247 LPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRN 306
+ + G + + D+ V S++ Y G + +FN +++
Sbjct: 182 VDTYVKSGKLESARTVFETMKDEN-----VVCCTSMISGYMNQGFVEDAEEIFNTTKVKD 236
Query: 307 VVSWNAMISGMAYNG-MGEVGVGLFEDMVR-GVTPNDSTFVGVLACC------------- 351
+V +NAM+ G + +G + V ++ M R G PN STF V+ C
Sbjct: 237 IVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVH 296
Query: 352 ----------------------AHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGR 389
A G ++ R +FD M K + + ++D G+
Sbjct: 297 AQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEK-----NVFSWTSMIDGYGK 351
Query: 390 CGHVREALDLIRSMP---MEPTAALWGALLSACRTHG 423
G+ EAL+L M +EP + LSAC G
Sbjct: 352 NGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSG 388
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 156/527 (29%), Positives = 254/527 (48%), Gaps = 74/527 (14%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
Q+H L+ G N + ++ RV A +VF+ ++I +NSII +
Sbjct: 216 QLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNG 275
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
++ +F M I D T S+ ++ R LG+++H+ F+R
Sbjct: 276 LAEKGLSVFVQML-VSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC 334
Query: 147 VGVVELYANCERM-------------------------------GDAGKVFDEMRER--- 172
++++Y+ C + G+A K+F+EM E
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 173 ------------------------------------DVIVWNLMIQGYCKVGELETGLEL 196
D+ V N ++ Y K G ++ +
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 454
Query: 197 FRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLE-KGFEPDDATLVTVLPVCARLGA 255
F M + ++SWN +I +K EAL LF +LE K F PD+ T+ VLP CA L A
Sbjct: 455 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 514
Query: 256 ADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMIS 315
D G IH Y G+ D V NSLVD Y KCG +F+++ +++VSW MI+
Sbjct: 515 FDKGREIHGYIMRNGYFSD-RHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIA 573
Query: 316 GMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLL 374
G +G G+ + LF M + G+ ++ +FV +L C+H+GLVD G F+ M + ++
Sbjct: 574 GYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIE 633
Query: 375 PKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKE 434
P +EHY C+VD+L R G + +A I +MP+ P A +WGALL CR H D ++AE A++
Sbjct: 634 PTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEK 693
Query: 435 LVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
+ +EP N+G++VL++NIYAE +W++V+++R + + ++K PG S
Sbjct: 694 VFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCS 740
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 166/361 (45%), Gaps = 42/361 (11%)
Query: 60 ATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAAS 119
A+RVF+ + +N ++ + S F LF M ++ + D +TF + K+ S
Sbjct: 148 ASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSS-GVEMDSYTFSCVSKSFS 206
Query: 120 NLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNL 179
+LR G+ LH + GF V +V Y +R+ A KVFDEM ERDVI WN
Sbjct: 207 SLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNS 266
Query: 180 MIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPD 239
+I GY G E GL +F +ML G E D
Sbjct: 267 IINGYVSNGLAEKGLS-------------------------------VFVQMLVSGIEID 295
Query: 240 DATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVF 299
AT+V+V CA +G +HS F R+ N+L+D Y KCG+ + +VF
Sbjct: 296 LATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED-RFCNTLLDMYSKCGDLDSAKAVF 354
Query: 300 NEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVD 358
EM R+VVS+ +MI+G A G+ V LFE+M G++P+ T VL CCA L+D
Sbjct: 355 REMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLD 414
Query: 359 RGR---ELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGAL 415
G+ E + F + ++D+ +CG ++EA + M ++ + W +
Sbjct: 415 EGKRVHEWIKENDLGFDIFVS----NALMDMYAKCGSMQEAELVFSEMRVKDIIS-WNTI 469
Query: 416 L 416
+
Sbjct: 470 I 470
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 134/296 (45%), Gaps = 34/296 (11%)
Query: 110 TFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEM 169
T S+L+ ++ + + G+ + + GF + + +Y NC + +A +VFDE+
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV 155
Query: 170 RERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFR 229
+ + WN+++ K G+ + LF++
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKK------------------------------ 185
Query: 230 EMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKC 289
M+ G E D T V + L + GE +H + GF + SVGNSLV FY K
Sbjct: 186 -MMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGF-GERNSVGNSLVAFYLKN 243
Query: 290 GNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVL 348
+ VF+EM R+V+SWN++I+G NG+ E G+ +F M V G+ + +T V V
Sbjct: 244 QRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVF 303
Query: 349 ACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMP 404
A CA + L+ GR + S+ VK + ++D+ +CG + A + R M
Sbjct: 304 AGCADSRLISLGRAVH-SIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMS 358
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 4/144 (2%)
Query: 202 DRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEW 261
DRSV N + + E A+ L + ++ D TL +VL +CA + G+
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKLL--CVSGKWDIDPRTLCSVLQLCADSKSLKDGKE 115
Query: 262 IHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNG 321
+ ++ GF+ D ++G+ L Y CG+ + VF+E+ + + WN +++ +A +G
Sbjct: 116 VDNFIRGNGFVID-SNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSG 174
Query: 322 MGEVGVGLFEDMV-RGVTPNDSTF 344
+GLF+ M+ GV + TF
Sbjct: 175 DFSGSIGLFKKMMSSGVEMDSYTF 198
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 255 bits (652), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 141/458 (30%), Positives = 235/458 (51%), Gaps = 41/458 (8%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
QIH+ + G + + +L FIS+ + ++ + +F P+I+ +N++I + +
Sbjct: 242 QIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNG 301
Query: 87 PFQQCFHLFS--LMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGP 144
+ LF ++ AR S T SL+ + +L L ++H F H
Sbjct: 302 ETELSLSLFKELMLSGARLRSS---TLVSLVPVSGHL---MLIYAIHGYCLKSNFLSHAS 355
Query: 145 VRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRS 204
V + +Y+ K+ E+E+ +LF ++S
Sbjct: 356 VSTALTTVYS-------------------------------KLNEIESARKLFDESPEKS 384
Query: 205 VVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHS 264
+ SWN MIS + E+A+ LFREM + F P+ T+ +L CA+LGA +G+W+H
Sbjct: 385 LPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHD 444
Query: 265 YANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGE 324
F I V +L+ Y KCG+ +F+ M +N V+WN MISG +G G+
Sbjct: 445 LVRSTDFESSIY-VSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQ 503
Query: 325 VGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCV 383
+ +F +M+ G+TP TF+ VL C+HAGLV G E+F+SM ++ P ++HY C+
Sbjct: 504 EALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACM 563
Query: 384 VDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNS 443
VD+LGR GH++ AL I +M +EP +++W LL ACR H D +A +++L ++P N
Sbjct: 564 VDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNV 623
Query: 444 GHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
G+HVLLSNI++ + + + VR ++ + K PG +
Sbjct: 624 GYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYT 661
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 181/430 (42%), Gaps = 41/430 (9%)
Query: 13 LSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNI 72
L + + + L Q HA + HG + +L + L + YA +F P++
Sbjct: 24 LDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDV 83
Query: 73 ILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHA 132
LFN +++ S++ +F+ +R + + P+ T+ + AAS RD + G+ +H
Sbjct: 84 FLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHG 143
Query: 133 QVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELET 192
Q G + +V++Y R+ DA KVFD M E+D I+WN MI GY
Sbjct: 144 QAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGY-------- 195
Query: 193 GLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREML-EKGFEPDDATLVTVLPVCA 251
K + E++ +FR+++ E D TL+ +LP A
Sbjct: 196 -----------------------RKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVA 232
Query: 252 RLGAADVGEWIHSYANDKG-FLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSW 310
L +G IHS A G + D V G + Y KCG + G ++F E ++V++
Sbjct: 233 ELQELRLGMQIHSLATKTGCYSHDYVLTG--FISLYSKCGKIKMGSALFREFRKPDIVAY 290
Query: 311 NAMISGMAYNGMGEVGVGLFED-MVRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAV 369
NAMI G NG E+ + LF++ M+ G ST V ++ H L+ +
Sbjct: 291 NAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI----YAIHGYCL 346
Query: 370 KFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAE 429
K L + + + + A L P E + W A++S +G E A
Sbjct: 347 KSNFLSHASVSTALTTVYSKLNEIESARKLFDESP-EKSLPSWNAMISGYTQNGLTEDAI 405
Query: 430 IAAKELVNVE 439
+E+ E
Sbjct: 406 SLFREMQKSE 415
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 255 bits (651), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 140/472 (29%), Positives = 242/472 (51%), Gaps = 41/472 (8%)
Query: 13 LSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNI 72
LS LH K H ++ G+ S+ ++ + + + A RVFN + ++
Sbjct: 255 LSALHQGK------WFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDL 308
Query: 73 ILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHA 132
+++ ++I + + + LF M+ I P+ T S+L + + +LG+S+H
Sbjct: 309 VMWTAMIVGYTHNGSVNEALSLFQKMKGVE-IKPNCVTIASVLSGCGLIENLELGRSVHG 367
Query: 133 QVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELET 192
+G V +V +YA C + DA VF+ E+D+
Sbjct: 368 LSIKVGIWDTN-VANALVHMYAKCYQNRDAKYVFEMESEKDI------------------ 408
Query: 193 GLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCAR 252
V+WN +IS ++ EAL LF M + P+ T+ ++ CA
Sbjct: 409 -------------VAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACAS 455
Query: 253 LGAADVGEWIHSYANDKGFL-RDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWN 311
LG+ VG +H+Y+ GFL V VG +L+DFY KCG+PQ+ +F+ + +N ++W+
Sbjct: 456 LGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWS 515
Query: 312 AMISGMAYNGMGEVGVGLFEDMVRGV-TPNDSTFVGVLACCAHAGLVDRGRELFDSMAVK 370
AMI G G + LFE+M++ PN+STF +L+ C H G+V+ G++ F SM
Sbjct: 516 AMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKD 575
Query: 371 FQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEI 430
+ P +HY C+VD+L R G + +ALD+I MP++P +GA L C H ++ EI
Sbjct: 576 YNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEI 635
Query: 431 AAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQSA 482
K+++++ P ++ ++VL+SN+YA + RW++ ++VR LM++ + K+ G S
Sbjct: 636 VIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHST 687
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 169/411 (41%), Gaps = 40/411 (9%)
Query: 15 LLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIIL 74
LL L Q H +GL I +S+ A VF+ P P+ L
Sbjct: 50 LLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYL 109
Query: 75 FNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQV 134
+ +++ L+ + L+ L+ D F LKA + L+D G+ +H Q+
Sbjct: 110 WKVMLRCYCLNKESVEVVKLYDLLMK-HGFRYDDIVFSKALKACTELQDLDNGKKIHCQL 168
Query: 135 TTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGL 194
+ + V G++++YA C + A KVF+++ R+V+ W MI GY K E GL
Sbjct: 169 VKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGL 227
Query: 195 ELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLG 254
LF RM + +V+ ++ T T++ C +L
Sbjct: 228 VLFNRMRENNVLG-------------------------------NEYTYGTLIMACTKLS 256
Query: 255 AADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMI 314
A G+W H G V SL+D Y KCG+ VFNE ++V W AMI
Sbjct: 257 ALHQGKWFHGCLVKSGIELSSCLV-TSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMI 315
Query: 315 SGMAYNGMGEVGVGLFEDMVRGV--TPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQ 372
G +NG + LF+ M +GV PN T VL+ C ++ GR + +++K
Sbjct: 316 VGYTHNGSVNEALSLFQKM-KGVEIKPNCVTIASVLSGCGLIENLELGRSV-HGLSIKVG 373
Query: 373 LLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHG 423
+ +V + +C R+A + M E W +++S +G
Sbjct: 374 IWDT-NVANALVHMYAKCYQNRDA-KYVFEMESEKDIVAWNSIISGFSQNG 422
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 171/415 (41%), Gaps = 51/415 (12%)
Query: 15 LLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIIL 74
L +G K QL ++ + N +L + + A + A +VFN N++
Sbjct: 158 LDNGKKIHCQLVKVPSF--------DNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVC 209
Query: 75 FNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQV 134
+ S+I + ++ LF+ MR + +Y T+ +L+ A + L G+ H +
Sbjct: 210 WTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEY-TYGTLIMACTKLSALHQGKWFHGCL 268
Query: 135 TTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGL 194
G + ++++Y C + +A +VF+E D+++W MI GY G + L
Sbjct: 269 VKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEAL 328
Query: 195 ELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFE--PDDATLVTVLPVCAR 252
LF++M KG E P+ T+ +VL C
Sbjct: 329 SLFQKM---------------------------------KGVEIKPNCVTIASVLSGCGL 355
Query: 253 LGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNA 312
+ ++G +H + G +V N+LV Y KC + VF +++V+WN+
Sbjct: 356 IENLELGRSVHGLSIKVGIWD--TNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNS 413
Query: 313 MISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKF 371
+ISG + NG + LF M VTPN T + + CA G + G L + +VK
Sbjct: 414 IISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSL-HAYSVKL 472
Query: 372 QLLPKLE-HYG-CVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGD 424
L H G ++D +CG + A LI E W A++ GD
Sbjct: 473 GFLASSSVHVGTALLDFYAKCGDPQSA-RLIFDTIEEKNTITWSAMIGGYGKQGD 526
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 150/473 (31%), Positives = 254/473 (53%), Gaps = 9/473 (1%)
Query: 15 LLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCA--SLHRVPYATRVFNHSPNPNI 72
L H K+ ++L +IH + GL ++ +S A S V YA + + +P
Sbjct: 14 LRHQCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPN 73
Query: 73 ILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHA 132
+N +I+ S S ++ ++ M + PD+ T+P L+K++S L + +LG SLH
Sbjct: 74 YGWNFVIRGFSNSRNPEKSISVYIQMLRF-GLLPDHMTYPFLMKSSSRLSNRKLGGSLHC 132
Query: 133 QVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELET 192
V G + ++ +Y + A K+FDEM ++++ WN ++ Y K G++ +
Sbjct: 133 SVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVS 192
Query: 193 GLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGF-EPDDATLVTVLPVCA 251
+F M +R VV+W+ MI K + +AL +F +M+ G + ++ T+V+V+ CA
Sbjct: 193 ARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACA 252
Query: 252 RLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR--NVVS 309
LGA + G+ +H Y D ++ + SL+D Y KCG+ SVF ++ + +
Sbjct: 253 HLGALNRGKTVHRYILDVHLPLTVI-LQTSLIDMYAKCGSIGDAWSVFYRASVKETDALM 311
Query: 310 WNAMISGMAYNGMGEVGVGLFEDMVRG-VTPNDSTFVGVLACCAHAGLVDRGRELFDSMA 368
WNA+I G+A +G + LF M + P++ TF+ +LA C+H GLV F S+
Sbjct: 312 WNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLK 371
Query: 369 VKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIA 428
+ PK EHY C+VD+L R G V++A D I MP++PT ++ GALL+ C HG+ E+A
Sbjct: 372 -ESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELA 430
Query: 429 EIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
E K+L+ ++P N G +V L+N+YA ++ +R M + +KK+ G S
Sbjct: 431 ETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHS 483
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 149/424 (35%), Positives = 225/424 (53%), Gaps = 16/424 (3%)
Query: 60 ATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAAS 119
A RVF+ + + +N+II A + + LF M +R I PD FTF S+LKA +
Sbjct: 436 AFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSR-IEPDEFTFGSILKACT 494
Query: 120 NLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNL 179
G +H+ + G A + V ++++Y+ C + +A K+ +R +
Sbjct: 495 G-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVS--- 550
Query: 180 MIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPD 239
G +E ++ + VSWN +IS ++ E+A +LF M+E G PD
Sbjct: 551 --------GTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPD 602
Query: 240 DATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVF 299
T TVL CA L +A +G+ IH+ K D V + ++LVD Y KCG+ +F
Sbjct: 603 KFTYATVLDTCANLASAGLGKQIHAQVIKKELQSD-VYICSTLVDMYSKCGDLHDSRLMF 661
Query: 300 NEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVD 358
+ R+ V+WNAMI G A++G GE + LFE M+ + PN TF+ +L CAH GL+D
Sbjct: 662 EKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLID 721
Query: 359 RGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSA 418
+G E F M + L P+L HY +VD+LG+ G V+ AL+LIR MP E +W LL
Sbjct: 722 KGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGV 781
Query: 419 CRTHGDR-EIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKV 477
C H + E+AE A L+ ++P +S + LLSN+YA+ W++V +R MR +KK
Sbjct: 782 CTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKE 841
Query: 478 PGQS 481
PG S
Sbjct: 842 PGCS 845
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 158/372 (42%), Gaps = 38/372 (10%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
QIH +R G + + + A R + RVF P N + +++II C +
Sbjct: 201 QIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNN 260
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
F M+ A + S+L++ + L + +LG LHA FA G VR
Sbjct: 261 LLSLALKFFKEMQKVNA-GVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVR 319
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
+++YA C+ M DA +FD + +N MI GY + E G
Sbjct: 320 TATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGY---SQEEHGF------------ 364
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA 266
+AL+LF ++ G D+ +L V CA + G I+ A
Sbjct: 365 ----------------KALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLA 408
Query: 267 NDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVG 326
D V V N+ +D Y KC VF+EM R+ VSWNA+I+ NG G
Sbjct: 409 IKSSLSLD-VCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYET 467
Query: 327 VGLFEDMVRG-VTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGC-VV 384
+ LF M+R + P++ TF +L C G + G E+ S+ VK + GC ++
Sbjct: 468 LFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSI-VKSGMASN-SSVGCSLI 524
Query: 385 DLLGRCGHVREA 396
D+ +CG + EA
Sbjct: 525 DMYSKCGMIEEA 536
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 145/312 (46%), Gaps = 8/312 (2%)
Query: 86 PPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPV 145
P F + + ++S F+F + K + +LG+ HA + GF V
Sbjct: 31 PSFS---YFTDFLNQVNSVSTTNFSF--VFKECAKQGALELGKQAHAHMIISGFRPTTFV 85
Query: 146 RVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSV 205
++++Y N A VFD+M RDV+ WN MI GY K ++ F M R V
Sbjct: 86 LNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDV 145
Query: 206 VSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSY 265
VSWN M+S + + +++ +F +M +G E D T +L VC+ L +G IH
Sbjct: 146 VSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGI 205
Query: 266 ANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEV 325
G D+V+ ++L+D Y K L VF +P +N VSW+A+I+G N + +
Sbjct: 206 VVRVGCDTDVVA-ASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSL 264
Query: 326 GVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVV 384
+ F++M + + S + VL CA + G +L + A+K +
Sbjct: 265 ALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQL-HAHALKSDFAADGIVRTATL 323
Query: 385 DLLGRCGHVREA 396
D+ +C ++++A
Sbjct: 324 DMYAKCDNMQDA 335
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 177/437 (40%), Gaps = 59/437 (13%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
Q+HAH L+ + + + A + A +F++S N N +N++I S
Sbjct: 302 QLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEE 361
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
+ LF + ++ + D + + +A + ++ G ++ + V
Sbjct: 362 HGFKALLLFHRLMSS-GLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVA 420
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
+++Y C+ + +A +VFDEMR RD + WN +I + + G
Sbjct: 421 NAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNG------------------ 462
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA 266
K E L LF ML EPD+ T ++L C G+ G IHS
Sbjct: 463 -------------KGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSI 508
Query: 267 NDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR-NV------------------ 307
G + SVG SL+D Y KCG + + + R NV
Sbjct: 509 VKSGMASN-SSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEM 567
Query: 308 -VSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFD 365
VSWN++ISG E LF M+ G+TP+ T+ VL CA+ G+++
Sbjct: 568 CVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQI-H 626
Query: 366 SMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDR 425
+ +K +L + +VD+ +CG + ++ L+ + W A++ HG
Sbjct: 627 AQVIKKELQSDVYICSTLVDMYSKCGDLHDS-RLMFEKSLRRDFVTWNAMICGYAHHGKG 685
Query: 426 EIAEIAAKELV--NVEP 440
E A + ++ N++P
Sbjct: 686 EEAIQLFERMILENIKP 702
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 155/460 (33%), Positives = 245/460 (53%), Gaps = 42/460 (9%)
Query: 27 QIHAHFLRHGL----HHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKAC 82
QIH +++GL SN ++ + S C SL+ A ++F+ S + N I +++++
Sbjct: 242 QIHCITIKNGLLGFVALSNALVTMY-SKCESLNE---ACKMFDSSGDRNSITWSAMVTGY 297
Query: 83 SLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARH 142
S + + LFS M +A I P +T +L A S++ + G+ LH+ + LGF RH
Sbjct: 298 SQNGESLEAVKLFSRMFSA-GIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERH 356
Query: 143 GPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGD 202
+V++YA + DA K FD ++ERDV +
Sbjct: 357 LFATTALVDMYAKAGCLADARKGFDCLQERDVAL-------------------------- 390
Query: 203 RSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWI 262
W +IS + EEAL+L+R M G P+D T+ +VL C+ L ++G+ +
Sbjct: 391 -----WTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQV 445
Query: 263 HSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGM 322
H + GF + V +G++L Y KCG+ + G VF P ++VVSWNAMISG+++NG
Sbjct: 446 HGHTIKHGFGLE-VPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQ 504
Query: 323 GEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYG 381
G+ + LFE+M+ G+ P+D TFV +++ C+H G V+RG F+ M+ + L PK++HY
Sbjct: 505 GDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYA 564
Query: 382 CVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPW 441
C+VDLL R G ++EA + I S ++ LW LLSAC+ HG E+ A ++L+ +
Sbjct: 565 CMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSR 624
Query: 442 NSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
S +V LS IY R +VE+V MR + K G S
Sbjct: 625 ESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCS 664
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 179/418 (42%), Gaps = 49/418 (11%)
Query: 28 IHAHFLRHG----LHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACS 83
+H +R G + H+N +L +F + C L + A +FN +++ +NS+I S
Sbjct: 36 VHGQIIRTGASTCIQHAN-VLVNFYAKCGKLAK---AHSIFNAIICKDVVSWNSLITGYS 91
Query: 84 LSPPFQQCFHLFSLMRNARA--ISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFAR 141
+ + + L R RA I P+ +T + KA S+L+ +G+ HA V +
Sbjct: 92 QNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFG 151
Query: 142 HGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMG 201
V +V +Y + D KVF M ER+ W+ M+ GY G +E +++F
Sbjct: 152 DIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFN--- 208
Query: 202 DRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEW 261
LF E+G + D VL A +G
Sbjct: 209 -------------------------LFLREKEEGSDS-DYVFTAVLSSLAATIYVGLGRQ 242
Query: 262 IHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNG 321
IH G L V++ N+LV Y KC + +F+ RN ++W+AM++G + NG
Sbjct: 243 IHCITIKNGLL-GFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNG 301
Query: 322 MGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHY 380
V LF M G+ P++ T VGVL C+ ++ G++L S +K L
Sbjct: 302 ESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQL-HSFLLKLGFERHLFAT 360
Query: 381 GCVVDLLGRCG---HVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKEL 435
+VD+ + G R+ D ++ E ALW +L+S + D E A I + +
Sbjct: 361 TALVDMYAKAGCLADARKGFDCLQ----ERDVALWTSLISGYVQNSDNEEALILYRRM 414
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 252 bits (644), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 149/458 (32%), Positives = 242/458 (52%), Gaps = 24/458 (5%)
Query: 27 QIHAHFLRHGLHHSNQIL-AHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLS 85
++HA+ L++G N + + + + + +V RVF+ + I L+N++I S +
Sbjct: 323 ELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQN 382
Query: 86 PPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPV 145
++ LF M + + + T ++ A F +++H V G R V
Sbjct: 383 EHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFV 442
Query: 146 RVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSV 205
+ ++++Y+ ++ A ++F +M +RD++ WN MI GY E L L +M +
Sbjct: 443 QNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQN--- 499
Query: 206 VSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSY 265
+ ++KG +P+ TL+T+LP CA L A G+ IH+Y
Sbjct: 500 -----LERKVSKGAS------------RVSLKPNSITLMTILPSCAALSALAKGKEIHAY 542
Query: 266 ANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEV 325
A D V+VG++LVD Y KCG Q VF+++P +NV++WN +I +G G+
Sbjct: 543 AIKNNLATD-VAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQE 601
Query: 326 GVGLFE-DMVRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVV 384
+ L MV+GV PN+ TF+ V A C+H+G+VD G +F M + + P +HY CVV
Sbjct: 602 AIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVV 661
Query: 385 DLLGRCGHVREALDLIRSMPME-PTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNS 443
DLLGR G ++EA L+ MP + A W +LL A R H + EI EIAA+ L+ +EP +
Sbjct: 662 DLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVA 721
Query: 444 GHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
H+VLL+NIY+ WD+ +VR M+E ++K PG S
Sbjct: 722 SHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCS 759
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 182/419 (43%), Gaps = 41/419 (9%)
Query: 27 QIHAHFLRHGLHHSNQILAH-FISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLS 85
QIHAH + G + +A+ +++ +VF+ N + +NS+I +
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 177
Query: 86 PPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNL---RDFQLGQSLHAQVTTLGFARH 142
++ F M + + P FT S++ A SNL +G+ +HA G
Sbjct: 178 EKWEMALEAFRCMLDEN-VEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG---- 232
Query: 143 GPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGD 202
E + + N ++ Y K+G+L + L G
Sbjct: 233 ----------------------------ELNSFIINTLVAMYGKLGKLASSKVLLGSFGG 264
Query: 203 RSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWI 262
R +V+WN ++S L + ++ EAL REM+ +G EPD+ T+ +VLP C+ L G+ +
Sbjct: 265 RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKEL 324
Query: 263 HSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGM 322
H+YA G L + VG++LVD YC C +G VF+ M R + WNAMI+G + N
Sbjct: 325 HAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEH 384
Query: 323 GEVGVGLFEDMVR--GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHY 380
+ + LF M G+ N +T GV+ C +G R +E VK L
Sbjct: 385 DKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR-KEAIHGFVVKRGLDRDRFVQ 443
Query: 381 GCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVE 439
++D+ R G + A+ + M + W +++ E A + ++ N+E
Sbjct: 444 NTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLE 501
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 149/331 (45%), Gaps = 42/331 (12%)
Query: 103 AISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHG-PVRVGVVELYANCERMGD 161
I PD + FP+LLKA ++L+D +LG+ +HA V G+ V +V LY C G
Sbjct: 92 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 151
Query: 162 AGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKE 221
KVFD + ER+ + WN +I C + E LE FR C
Sbjct: 152 VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFR---------------C------- 189
Query: 222 EEALVLFREMLEKGFEPDDATLVTVLPVCARLGAAD---VGEWIHSYANDKGFLRDIVSV 278
ML++ EP TLV+V+ C+ L + +G+ +H+Y KG L +
Sbjct: 190 ---------MLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII- 239
Query: 279 GNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGV 337
N+LV Y K G + + R++V+WN ++S + N + +MV GV
Sbjct: 240 -NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGV 298
Query: 338 TPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYG-CVVDLLGRCGHVREA 396
P++ T VL C+H ++ G+EL + A+K L + G +VD+ C V
Sbjct: 299 EPDEFTISSVLPACSHLEMLRTGKEL-HAYALKNGSLDENSFVGSALVDMYCNCKQVLSG 357
Query: 397 LDLIRSMPMEPTAALWGALLSA-CRTHGDRE 426
+ M + LW A+++ + D+E
Sbjct: 358 RRVFDGM-FDRKIGLWNAMIAGYSQNEHDKE 387
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 1/152 (0%)
Query: 203 RSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWI 262
RS W ++ + EA++ + +M+ G +PD+ +L A L ++G+ I
Sbjct: 60 RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQI 119
Query: 263 HSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGM 322
H++ G+ D V+V N+LV+ Y KCG+ A VF+ + RN VSWN++IS +
Sbjct: 120 HAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEK 179
Query: 323 GEVGVGLFEDMV-RGVTPNDSTFVGVLACCAH 353
E+ + F M+ V P+ T V V+ C++
Sbjct: 180 WEMALEAFRCMLDENVEPSSFTLVSVVTACSN 211
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 252 bits (643), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 140/384 (36%), Positives = 204/384 (53%), Gaps = 34/384 (8%)
Query: 102 RAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANC---ER 158
+ D FT S+L A ++L G+ H ++ GF ++ V G+++ Y+ C +
Sbjct: 234 KGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDG 293
Query: 159 MGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKG 218
M D+ KVF E+ D++VWN MI GY EL
Sbjct: 294 MYDSEKVFQEILSPDLVVWNTMISGYSMNEELS--------------------------- 326
Query: 219 KKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSV 278
EEA+ FR+M G PDD + V V C+ L + + IH A + +SV
Sbjct: 327 ---EEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISV 383
Query: 279 GNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGV 337
N+L+ Y K GN Q VF+ MP N VS+N MI G A +G G + L++ M+ G+
Sbjct: 384 NNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGI 443
Query: 338 TPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREAL 397
PN TFV VL+ CAH G VD G+E F++M F++ P+ EHY C++DLLGR G + EA
Sbjct: 444 APNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAE 503
Query: 398 DLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEM 457
I +MP +P + W ALL ACR H + +AE AA EL+ ++P + +V+L+N+YA+
Sbjct: 504 RFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADAR 563
Query: 458 RWDEVEKVRVLMREGHIKKVPGQS 481
+W+E+ VR MR I+K PG S
Sbjct: 564 KWEEMASVRKSMRGKRIRKKPGCS 587
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 129/504 (25%), Positives = 214/504 (42%), Gaps = 68/504 (13%)
Query: 15 LLHGAKTRTQLT--QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNI 72
LL R T +HA +++ + S + HF+++ + R+ YA F + PN+
Sbjct: 15 LLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNV 74
Query: 73 ILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHA 132
+N I+KA + LF + PD ++ +L+ ++ R+ L
Sbjct: 75 FSYNVIVKAYAKDSKIHIARQLFDEIPQ-----PDTVSYNTLISGYADARETFAAMVLFK 129
Query: 133 QVTTLGFARHGPVRVGVVELYANCERMGDAGKV--------FDEMRERDVIVWNLMIQGY 184
++ LGF G G++ A C+R+ ++ FD V N + Y
Sbjct: 130 RMRKLGFEVDGFTLSGLIA--ACCDRVDLIKQLHCFSVSGGFDSYSS----VNNAFVTYY 183
Query: 185 CKVGELETGLELFRRMGD-RSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATL 243
K G L + +F M + R VSWN MI + K+ +AL L++EM+ KGF+ D TL
Sbjct: 184 SKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTL 243
Query: 244 VTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQA---GLSVFN 300
+VL L G H GF ++ VG+ L+DFY KCG VF
Sbjct: 244 ASVLNALTSLDHLIGGRQFHGKLIKAGFHQN-SHVGSGLIDFYSKCGGCDGMYDSEKVFQ 302
Query: 301 EMPMRNVVSWNAMISGMAYN-GMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVD 358
E+ ++V WN MISG + N + E V F M R G P+D +FV V + C++
Sbjct: 303 EILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPS 362
Query: 359 RGRELFDSMAVK------------------------------FQLLPKLE--HYGCVVDL 386
+ +++ +A+K F +P+L + C++
Sbjct: 363 QCKQI-HGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKG 421
Query: 387 LGRCGHVREALDLIRSM---PMEPTAALWGALLSACRTHGDREIAE---IAAKELVNVEP 440
+ GH EAL L + M + P + A+LSAC G + + KE +EP
Sbjct: 422 YAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEP 481
Query: 441 WNSGHHVLLSNIYAEEMRWDEVEK 464
+ H+ + ++ + +E E+
Sbjct: 482 -EAEHYSCMIDLLGRAGKLEEAER 504
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 148/334 (44%), Gaps = 10/334 (2%)
Query: 110 TFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEM 169
TF LL + RD G+SLHA A + V LY+ C R+ A F
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 170 RERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFR 229
E +V +N++++ Y K ++ +LF + VS+N +IS A ++ A+VLF+
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFK 129
Query: 230 EMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKC 289
M + GFE D TL ++ C D+ + +H ++ GF SV N+ V +Y K
Sbjct: 130 RMRKLGFEVDGFTLSGLIAACC--DRVDLIKQLHCFSVSGGF-DSYSSVNNAFVTYYSKG 186
Query: 290 GNPQAGLSVFNEM-PMRNVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGV 347
G + +SVF M +R+ VSWN+MI + G + L+++M+ +G + T V
Sbjct: 187 GLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASV 246
Query: 348 LACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMP--M 405
L + GR+ F +K ++D +CG D + +
Sbjct: 247 LNALTSLDHLIGGRQ-FHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEIL 305
Query: 406 EPTAALWGALLSACRTHGDREIAEIAAKELVNVE 439
P +W ++S + E++E A K ++
Sbjct: 306 SPDLVVWNTMISGYSM--NEELSEEAVKSFRQMQ 337
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 150/476 (31%), Positives = 237/476 (49%), Gaps = 36/476 (7%)
Query: 10 RRILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCAS--LHRVPYATRVFNH- 66
R I+ +L G + +L +IH+H + +GL H I H + CA + +A +F+H
Sbjct: 6 RVIVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHF 65
Query: 67 SPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQL 126
+P+ +N +I+ S S ++ M + PD FTF LK+ ++
Sbjct: 66 DSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPK 125
Query: 127 GQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCK 186
+H V GF D IV +++ Y
Sbjct: 126 CLEIHGSVIRSGFLD-------------------------------DAIVATSLVRCYSA 154
Query: 187 VGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTV 246
G +E ++F M R +VSWN+MI C + +AL +++ M +G D TLV +
Sbjct: 155 NGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVAL 214
Query: 247 LPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRN 306
L CA + A ++G +H A D V V N+L+D Y KCG+ + + VFN M R+
Sbjct: 215 LSSCAHVSALNMGVMLHRIACDIR-CESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRD 273
Query: 307 VVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFD 365
V++WN+MI G +G G + F MV GV PN TF+G+L C+H GLV G E F+
Sbjct: 274 VLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFE 333
Query: 366 SMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDR 425
M+ +F L P ++HYGC+VDL GR G + +L++I + LW LL +C+ H +
Sbjct: 334 IMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNL 393
Query: 426 EIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
E+ E+A K+LV +E +N+G +VL+++IY+ +R L+R ++ VPG S
Sbjct: 394 ELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWS 449
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 142/421 (33%), Positives = 216/421 (51%), Gaps = 34/421 (8%)
Query: 62 RVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNL 121
RVF P +++ +N+II + S ++ + M + PD FT S+L S
Sbjct: 197 RVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREM-GTTDLKPDSFTLSSVLPIFSEY 255
Query: 122 RDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMI 181
D G+ +H V +R G+ + DV + + ++
Sbjct: 256 VDVIKGKEIHGYV----------IRKGI---------------------DSDVYIGSSLV 284
Query: 182 QGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDA 241
Y K +E +F R+ R +SWN +++ + + EAL LFR+M+ +P
Sbjct: 285 DMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAV 344
Query: 242 TLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNE 301
+V+P CA L +G+ +H Y GF +I + ++LVD Y KCGN +A +F+
Sbjct: 345 AFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIF-IASALVDMYSKCGNIKAARKIFDR 403
Query: 302 MPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRG 360
M + + VSW A+I G A +G G V LFE+M R GV PN FV VL C+H GLVD
Sbjct: 404 MNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEA 463
Query: 361 RELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACR 420
F+SM + L +LEHY V DLLGR G + EA + I M +EPT ++W LLS+C
Sbjct: 464 WGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCS 523
Query: 421 THGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQ 480
H + E+AE A+++ V+ N G +VL+ N+YA RW E+ K+R+ MR+ ++K P
Sbjct: 524 VHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPAC 583
Query: 481 S 481
S
Sbjct: 584 S 584
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 198/413 (47%), Gaps = 17/413 (4%)
Query: 20 KTRTQLTQIHAHFLR-HGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSI 78
K+++Q Q+HA F+R L H++ + IS+ +L + A +F +P ++ + S+
Sbjct: 19 KSKSQAKQLHAQFIRTQSLSHTSASIV--ISIYTNLKLLHEALLLFKTLKSPPVLAWKSV 76
Query: 79 IKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLG 138
I+ + F + F MR A PD+ FPS+LK+ + + D + G+S+H + LG
Sbjct: 77 IRCFTDQSLFSKALASFVEMR-ASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLG 135
Query: 139 FARHGPVRVGVVELYANCERMG---DAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLE 195
++ +YA MG G VFDEM +R + ++ + + G++
Sbjct: 136 MDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCI--MPFGID 193
Query: 196 LFRR----MGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCA 251
RR M + VVS+N +I+ A+ E+AL + REM +PD TL +VLP+ +
Sbjct: 194 SVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFS 253
Query: 252 RLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWN 311
G+ IH Y KG D V +G+SLVD Y K + VF+ + R+ +SWN
Sbjct: 254 EYVDVIKGKEIHGYVIRKGIDSD-VYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWN 312
Query: 312 AMISGMAYNGMGEVGVGLFEDMVRG-VTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVK 370
++++G NG + LF MV V P F V+ CAH + G++L ++
Sbjct: 313 SLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQL-HGYVLR 371
Query: 371 FQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHG 423
+ +VD+ +CG+++ A + M + + W A++ HG
Sbjct: 372 GGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVS-WTAIIMGHALHG 423
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 167/531 (31%), Positives = 251/531 (47%), Gaps = 79/531 (14%)
Query: 27 QIHAHFLRHG-LHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLS 85
QIH +R G L S + +++ A + A VF S ++ +N++I ++
Sbjct: 81 QIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGSER-DVFGYNALISGFVVN 139
Query: 86 PPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPV 145
+ MR A I PD +TFPSLLK S+ + + +H LGF V
Sbjct: 140 GSPLDAMETYREMR-ANGILPDKYTFPSLLK-GSDAMELSDVKKVHGLAFKLGFDSDCYV 197
Query: 146 RVGVVELYANCERMGDAGKVFDEMRER-DVIVWNLMIQGYCKVGELETGLELFRRM---- 200
G+V Y+ + DA KVFDE+ +R D ++WN ++ GY ++ E L +F +M
Sbjct: 198 GSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEG 257
Query: 201 ------------------GD-----------------RSVVSWNLMISCLAKGKKEEEAL 225
GD +V N +I K K EEA
Sbjct: 258 VGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEAN 317
Query: 226 VLFREMLEK-------------------------------GFEPDDATLVTVLPVCARLG 254
+F M E+ G PD TL TVLP C RL
Sbjct: 318 SIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLA 377
Query: 255 AADVGEWIHSYANDKGFLRDIVS---VGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWN 311
+ G IH Y G L S + NSL+D Y KCG+ + VF+ M +++ SWN
Sbjct: 378 SLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWN 437
Query: 312 AMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVK 370
MI+G GE+ + +F M R GV P++ TFVG+L C+H+G ++ GR M
Sbjct: 438 IMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETV 497
Query: 371 FQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEI 430
+ +LP +HY CV+D+LGR + EA +L S P+ +W ++LS+CR HG++++A +
Sbjct: 498 YNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALV 557
Query: 431 AAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
A K L +EP + G +VL+SN+Y E +++EV VR MR+ ++KK PG S
Sbjct: 558 AGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCS 608
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 76/179 (42%), Gaps = 4/179 (2%)
Query: 241 ATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFN 300
AT + L CA+ G+ IH + KGFL D G SLV+ Y KCG + + VF
Sbjct: 61 ATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFG 120
Query: 301 EMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVDR 359
R+V +NA+ISG NG + + +M G+ P+ TF +L L D
Sbjct: 121 GSE-RDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDV 179
Query: 360 GRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSA 418
+ +A K +V + V +A + +P + LW AL++
Sbjct: 180 KK--VHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNG 236
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 147/428 (34%), Positives = 220/428 (51%), Gaps = 35/428 (8%)
Query: 56 RVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLL 115
+V A ++F P N+I + ++I + + LF M I F ++
Sbjct: 174 KVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRC-CIKSTSRPFTCVI 232
Query: 116 KAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVI 175
A +N F +G +H + LGF V ++ YANC+R+GD+ KVFDE V
Sbjct: 233 TACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVA 292
Query: 176 VWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKG 235
VW ++ GY + KK E+AL +F ML
Sbjct: 293 VWTALLSGY-------------------------------SLNKKHEDALSIFSGMLRNS 321
Query: 236 FEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAG 295
P+ +T + L C+ LG D G+ +H A G D VGNSLV Y GN
Sbjct: 322 ILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAF-VGNSLVVMYSDSGNVNDA 380
Query: 296 LSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHA 354
+SVF ++ +++VSWN++I G A +G G+ +F M+R P++ TF G+L+ C+H
Sbjct: 381 VSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHC 440
Query: 355 GLVDRGRELFDSMAVKFQLLP-KLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWG 413
G +++GR+LF M+ + K++HY C+VD+LGRCG ++EA +LI M ++P +W
Sbjct: 441 GFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWL 500
Query: 414 ALLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGH 473
ALLSACR H D + E AA + N++ +S +VLLSNIYA RW V K+RV M++
Sbjct: 501 ALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNG 560
Query: 474 IKKVPGQS 481
I K PG S
Sbjct: 561 IMKKPGSS 568
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 175/393 (44%), Gaps = 25/393 (6%)
Query: 56 RVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLL 115
R+ A VFN P+P++ L+ +I + S +LF M D ++ S++
Sbjct: 50 RIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMP-----VRDVVSWNSMI 104
Query: 116 KAASNLRDFQLGQSLHAQVTTLGFARHGPVR--VGVVELYANCERMG---DAGKVFDEMR 170
D L ++ P R V + C R G A ++F +M
Sbjct: 105 SGCVECGDMNTAVKLFDEM---------PERSVVSWTAMVNGCFRSGKVDQAERLFYQMP 155
Query: 171 ERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFRE 230
+D WN M+ GY + G+++ L+LF++M ++V+SW MI L + ++ EAL LF+
Sbjct: 156 VKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKN 215
Query: 231 MLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCG 290
ML + V+ CA A +G +H GFL + V SL+ FY C
Sbjct: 216 MLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYE-EYVSASLITFYANCK 274
Query: 291 NPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLA 349
VF+E V W A++SG + N E + +F M+R + PN STF L
Sbjct: 275 RIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLN 334
Query: 350 CCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTA 409
C+ G +D G+E+ +AVK L +V + G+V +A+ + + + +
Sbjct: 335 SCSALGTLDWGKEM-HGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSI 392
Query: 410 ALWGALLSACRTHGDREIAEIAAKELV--NVEP 440
W +++ C HG + A + +++ N EP
Sbjct: 393 VSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEP 425
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 137/337 (40%), Gaps = 66/337 (19%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
Q+H ++ G + + A I+ A+ R+ + +VF+ + + ++ +++ SL+
Sbjct: 246 QVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNK 305
Query: 87 PFQQCFHLFS-LMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPV 145
+ +FS ++RN +I P+ TF S L + S L G+ +H LG V
Sbjct: 306 KHEDALSIFSGMLRN--SILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFV 363
Query: 146 RVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSV 205
+V +Y++ + DA VF ++ ++ ++ WN +I G + G
Sbjct: 364 GNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHG----------------- 406
Query: 206 VSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSY 265
+GK A V+F +M+ EPD+ T +L C+ G + G + Y
Sbjct: 407 -----------RGK---WAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYY 452
Query: 266 ANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEV 325
+S G + +D R + + M+ + G +
Sbjct: 453 ----------MSSGINHID--------------------RKIQHYTCMVDILGRCGKLKE 482
Query: 326 GVGLFEDMVRGVTPNDSTFVGVLACCAHAGLVDRGRE 362
L E MV V PN+ ++ +L+ C VDRG +
Sbjct: 483 AEELIERMV--VKPNEMVWLALLSACRMHSDVDRGEK 517
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 249 bits (635), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 153/459 (33%), Positives = 233/459 (50%), Gaps = 43/459 (9%)
Query: 28 IHAHFL----RHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACS 83
+HAH L RH + N +L + + C SL A +VF P + + + ++I S
Sbjct: 82 VHAHILQSIFRHDIVMGNTLLNMY-AKCGSLEE---ARKVFEKMPQRDFVTWTTLISGYS 137
Query: 84 LSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHG 143
F+ M SP+ FT S++KAA+ R G LH GF +
Sbjct: 138 QHDRPCDALLFFNQMLRF-GYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNV 196
Query: 144 PVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDR 203
V +++LY M DA VFD + R+
Sbjct: 197 HVGSALLDLYTRYGLMDDAQLVFDALESRND----------------------------- 227
Query: 204 SVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIH 263
VSWN +I+ A+ E+AL LF+ ML GF P + ++ C+ G + G+W+H
Sbjct: 228 --VSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVH 285
Query: 264 SYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMG 323
+Y G + + GN+L+D Y K G+ +F+ + R+VVSWN++++ A +G G
Sbjct: 286 AYMIKSG-EKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFG 344
Query: 324 EVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGC 382
+ V FE+M R G+ PN+ +F+ VL C+H+GL+D G ++ M K ++P+ HY
Sbjct: 345 KEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMK-KDGIVPEAWHYVT 403
Query: 383 VVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWN 442
VVDLLGR G + AL I MP+EPTAA+W ALL+ACR H + E+ AA+ + ++P +
Sbjct: 404 VVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDD 463
Query: 443 SGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
G HV+L NIYA RW++ +VR M+E +KK P S
Sbjct: 464 PGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACS 502
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 248 bits (632), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 159/486 (32%), Positives = 248/486 (51%), Gaps = 23/486 (4%)
Query: 7 QIERRILSLLHGAKTRTQLT----QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATR 62
+++ LSL+ A +R QIH + GL + I + + + +
Sbjct: 118 SVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQ 177
Query: 63 VFNHSPNPNIILFNSIIKA---CSLSPPFQQCFHLFSL-MRNARAISPDYFTFPSLLKAA 118
+F+ P + + +NS+I C L ++ F L + M+N ++ S++
Sbjct: 178 MFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKN-------LISWNSMISGY 230
Query: 119 SNLRD-FQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVW 177
+ D + L A + +++ Y R+ DA +FD M RDV+ W
Sbjct: 231 AQTSDGVDIASKLFADMPEKDLISWN----SMIDGYVKHGRIEDAKGLFDVMPRRDVVTW 286
Query: 178 NLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREM-LEKGF 236
MI GY K+G + LF +M R VV++N M++ + K EAL +F +M E
Sbjct: 287 ATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHL 346
Query: 237 EPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGL 296
PDD TLV VLP A+LG +H Y +K F +G +L+D Y KCG+ Q +
Sbjct: 347 LPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLG-GKLGVALIDMYSKCGSIQHAM 405
Query: 297 SVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAG 355
VF + +++ WNAMI G+A +G+GE + + R + P+D TFVGVL C+H+G
Sbjct: 406 LVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSG 465
Query: 356 LVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGAL 415
LV G F+ M K ++ P+L+HYGC+VD+L R G + A +LI MP+EP +W
Sbjct: 466 LVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTF 525
Query: 416 LSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIK 475
L+AC H + E E+ AK L+ +N +VLLSN+YA W +V +VR +M+E I+
Sbjct: 526 LTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIE 585
Query: 476 KVPGQS 481
K+PG S
Sbjct: 586 KIPGCS 591
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 101/238 (42%), Gaps = 45/238 (18%)
Query: 208 WNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYAN 267
WN +I + GK +AL+L MLE G D +L VL C+RLG G IH +
Sbjct: 89 WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLK 148
Query: 268 DKG-----FL--------------------------RDIVSVGNSLVDFYCKCGNPQAGL 296
G FL RD VS NS++D Y KCG +
Sbjct: 149 KTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSY-NSMIDGYVKCGLIVSAR 207
Query: 297 SVFNEMP--MRNVVSWNAMISGMAYNGMG-EVGVGLFEDMV-RGVTPNDSTFVGVLACCA 352
+F+ MP M+N++SWN+MISG A G ++ LF DM + + +S G +
Sbjct: 208 ELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVK--- 264
Query: 353 HAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAA 410
G ++ + LFD M + + + ++D + G V A L MP A
Sbjct: 265 -HGRIEDAKGLFDVMPRR-----DVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVA 316
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 134/364 (36%), Positives = 204/364 (56%), Gaps = 26/364 (7%)
Query: 131 HAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVW-----------NL 179
HAQ+ LG+ + + V V Y C R A R +++W NL
Sbjct: 53 HAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLA---------RRLLLWFLSLSPGVCNINL 103
Query: 180 MIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLE-KGFEP 238
+I+ K+GE ++ R D++V++WNLMI + + EEAL + ML +P
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 239 DDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSV 298
+ + + L CARLG +W+HS D G + + + ++LVD Y KCG+ V
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAI-LSSALVDVYAKCGDIGTSREV 222
Query: 299 FNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGLV 357
F + +V WNAMI+G A +G+ + +F +M V+P+ TF+G+L C+H GL+
Sbjct: 223 FYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLL 282
Query: 358 DRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLS 417
+ G+E F M+ +F + PKLEHYG +VDLLGR G V+EA +LI SMP+EP +W +LLS
Sbjct: 283 EEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
Query: 418 ACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKV 477
+ RT+ + E+ EIA + N+ SG +VLLSNIY+ +W+ +KVR LM + I+K
Sbjct: 343 SSRTYKNPELGEIAIQ---NLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKA 399
Query: 478 PGQS 481
G+S
Sbjct: 400 KGKS 403
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/312 (19%), Positives = 127/312 (40%), Gaps = 32/312 (10%)
Query: 60 ATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAAS 119
A +V ++ + N+I +N +I + +++ M + I P+ F+F S L A +
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 120 NLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNL 179
L D + +H+ + G + + +V++YA C +G + +VF ++ DV +WN
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNA 236
Query: 180 MIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPD 239
MI G+ G L T EA+ +F EM + PD
Sbjct: 237 MITGFATHG-LAT------------------------------EAIRVFSEMEAEHVSPD 265
Query: 240 DATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVF 299
T + +L C+ G + G+ + + ++ + ++VD + G + +
Sbjct: 266 SITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELI 325
Query: 300 NEMPMR-NVVSWNAMISGMAYNGMGEVGVGLFEDMVRGVTPNDSTFVGVLACCAHAGLVD 358
MP+ +VV W +++S E+G +++ + + + + +
Sbjct: 326 ESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKAKSGDYVLLSNIYSSTKKWESAQ 385
Query: 359 RGRELFDSMAVK 370
+ REL ++
Sbjct: 386 KVRELMSKEGIR 397
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 152/483 (31%), Positives = 248/483 (51%), Gaps = 47/483 (9%)
Query: 9 ERRILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFI-SVCASL---HRVPYATRVF 64
E+ L LL + Q+HA F++ L +S+ A + + CA + + YA +F
Sbjct: 30 EQECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIF 89
Query: 65 NHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDF 124
+P FN++I+ F++ ++ M R PD FT+P LLKA + L+
Sbjct: 90 RGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQ-RGNEPDNFTYPCLLKACTRLKSI 148
Query: 125 QLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGY 184
+ G+ +H QV LG V+ ++ +Y C M + VF+++ + W+ M+
Sbjct: 149 REGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSAR 208
Query: 185 CKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREML-EKGFEPDDATL 243
+G W+ E L+LFR M E + +++ +
Sbjct: 209 AGMG------------------MWS-------------ECLLLFRGMCSETNLKAEESGM 237
Query: 244 VTVLPVCARLGAADVGEWIHSYANDKGFLRDI----VSVGNSLVDFYCKCGNPQAGLSVF 299
V+ L CA GA ++G IH + LR+I + V SLVD Y KCG L +F
Sbjct: 238 VSALLACANTGALNLGMSIHGF-----LLRNISELNIIVQTSLVDMYVKCGCLDKALHIF 292
Query: 300 NEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVD 358
+M RN ++++AMISG+A +G GE + +F M++ G+ P+ +V VL C+H+GLV
Sbjct: 293 QKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVK 352
Query: 359 RGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSA 418
GR +F M + ++ P EHYGC+VDLLGR G + EAL+ I+S+P+E +W LS
Sbjct: 353 EGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQ 412
Query: 419 CRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVP 478
CR + E+ +IAA+EL+ + N G ++L+SN+Y++ WD+V + R + +K+ P
Sbjct: 413 CRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTP 472
Query: 479 GQS 481
G S
Sbjct: 473 GFS 475
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 246 bits (628), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 162/525 (30%), Positives = 252/525 (48%), Gaps = 73/525 (13%)
Query: 28 IHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPP 87
+H+ ++ G + + A I+ + V A VF +I+++ I+ +
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 88 FQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRV 147
F+ L S MR A P+ +TF + LKA+ L F + +H Q+ + V V
Sbjct: 228 FEDSLKLLSCMRMA-GFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGV 286
Query: 148 GVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVS 207
G+++LY M DA KVF+EM + DV+ W+ MI +C+ G ++LF RM + VV
Sbjct: 287 GLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVP 346
Query: 208 ---------------------------------------WNLMISCLAKGKKEEEALVLF 228
N +I AK +K + A+ LF
Sbjct: 347 NEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLF 406
Query: 229 REMLEK----------GFEP---------------------DDATLVTVLPVCARLGAAD 257
E+ K G+E + T + L CA L + D
Sbjct: 407 AELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMD 466
Query: 258 VGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGM 317
+G +H A + V+V NSL+D Y KCG+ + SVFNEM +V SWNA+ISG
Sbjct: 467 LGVQVHGLAIKTNNAKK-VAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGY 525
Query: 318 AYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPK 376
+ +G+G + + + M R PN TF+GVL+ C++AGL+D+G+E F+SM + P
Sbjct: 526 STHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPC 585
Query: 377 LEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELV 436
LEHY C+V LLGR G + +A+ LI +P EP+ +W A+LSA + E A +A+E++
Sbjct: 586 LEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEIL 645
Query: 437 NVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
+ P + +VL+SN+YA +W V +R M+E +KK PG S
Sbjct: 646 KINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLS 690
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 139/346 (40%), Gaps = 41/346 (11%)
Query: 60 ATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFS-LMRNARAISPDYFTFPSLLKAA 118
A +F+ P N + F ++ + + P L+S L R ++P FT S LK
Sbjct: 103 ALNLFDEMPERNNVSFVTLAQGYACQDPIG----LYSRLHREGHELNPHVFT--SFLKLF 156
Query: 119 SNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWN 178
+L ++ LH+ + LG+ + V ++ Y+ C + A VF+ + +D+
Sbjct: 157 VSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDI---- 212
Query: 179 LMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEP 238
V W ++SC + E++L L M GF P
Sbjct: 213 ---------------------------VVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMP 245
Query: 239 DDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSV 298
++ T T L LGA D + +H ++ D VG L+ Y + G+ V
Sbjct: 246 NNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLD-PRVGVGLLQLYTQLGDMSDAFKV 304
Query: 299 FNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRG-VTPNDSTFVGVLACCAHAGLV 357
FNEMP +VV W+ MI+ NG V LF M V PN+ T +L CA
Sbjct: 305 FNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCS 364
Query: 358 DRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSM 403
G +L + VK + ++D+ +C + A+ L +
Sbjct: 365 GLGEQLH-GLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAEL 409
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 147/454 (32%), Positives = 238/454 (52%), Gaps = 34/454 (7%)
Query: 29 HAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPPF 88
H +R L +L I+ + V A +VF+ +++ +N++I + +
Sbjct: 84 HGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRME 143
Query: 89 QQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVG 148
+ +F MRN FT S+L A D + LH + V
Sbjct: 144 SEALDIFLEMRN-EGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTA 202
Query: 149 VVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSW 208
+++LYA C + DA +++F M D+S V+W
Sbjct: 203 LLDLYAKCGMIKDA-------------------------------VQVFESMQDKSSVTW 231
Query: 209 NLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYAND 268
+ M++ + K EEAL+L+R E + TL +V+ C+ L A G+ +H+
Sbjct: 232 SSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICK 291
Query: 269 KGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVG 328
GF ++ V +S VD Y KCG+ + +F+E+ +N+ WN +ISG A + + +
Sbjct: 292 SGFGSNVF-VASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMI 350
Query: 329 LFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLL 387
LFE M + G+ PN+ TF +L+ C H GLV+ GR F M + L P + HY C+VD+L
Sbjct: 351 LFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDIL 410
Query: 388 GRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGHHV 447
GR G + EA +LI+S+P +PTA++WG+LL++CR + + E+AE+AA++L +EP N+G+HV
Sbjct: 411 GRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHV 470
Query: 448 LLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
LLSNIYA +W+E+ K R L+R+ +KKV G+S
Sbjct: 471 LLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKS 504
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 246 bits (627), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 141/396 (35%), Positives = 224/396 (56%), Gaps = 4/396 (1%)
Query: 89 QQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVG 148
+Q +LF M ++ A+ D F LK+ + LG S+HA F + V
Sbjct: 29 EQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCA 88
Query: 149 VVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDR-SVVS 207
++++Y C + A K+FDE+ +R+ +VWN MI Y G+++ +EL+ M + S
Sbjct: 89 LLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESS 148
Query: 208 WNLMISCLAKGKK-EEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA 266
+N +I L + A+ +R+M+E F+P+ TL+ ++ C+ +GA + + IHSYA
Sbjct: 149 FNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYA 208
Query: 267 NDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVG 326
+ + + + LV+ Y +CG+ VF+ M R+VV+W+++IS A +G E
Sbjct: 209 F-RNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESA 267
Query: 327 VGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVD 385
+ F++M + VTP+D F+ VL C+HAGL D F M + L +HY C+VD
Sbjct: 268 LKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVD 327
Query: 386 LLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGH 445
+L R G EA +I++MP +PTA WGALL ACR +G+ E+AEIAA+EL+ VEP N +
Sbjct: 328 VLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPAN 387
Query: 446 HVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
+VLL IY R +E E++R+ M+E +K PG S
Sbjct: 388 YVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 246 bits (627), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 140/423 (33%), Positives = 234/423 (55%), Gaps = 15/423 (3%)
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMR-NARAISPDYFTFPSLLKAASNLRDFQLGQ 128
P+ + + S++ S F+ F LMR + A+S + + L + +
Sbjct: 257 PDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGE--ALAVFFSVCAELEALSIAE 314
Query: 129 SLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVG 188
+H V GF + P R ++ +Y ++ DA +F ++R + + WN +I + G
Sbjct: 315 KVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAG 374
Query: 189 ELETGLELFRRMGD--------RSVVSWNLMIS-CLAKGKKEEEALVLFREMLEKGFEPD 239
+L+ L LF + + +VV+W +I C +G+ ++ +L FR+M +
Sbjct: 375 KLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDD-SLEYFRQMQFSKVLAN 433
Query: 240 DATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVF 299
T+ +L +CA L A ++G IH + +I+ V N+LV+ Y KCG G VF
Sbjct: 434 SVTICCILSICAELPALNLGREIHGHVIRTSMSENIL-VQNALVNMYAKCGLLSEGSLVF 492
Query: 300 NEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVD 358
+ ++++SWN++I G +G E + +F+ M+ G P+ V VL+ C+HAGLV+
Sbjct: 493 EAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVE 552
Query: 359 RGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSA 418
+GRE+F SM+ +F L P+ EHY C+VDLLGR G ++EA +++++MPMEP + GALL++
Sbjct: 553 KGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNS 612
Query: 419 CRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVP 478
CR H + +IAE A +L +EP +G ++LLSNIY+ RW+E VR L ++ +KKV
Sbjct: 613 CRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVS 672
Query: 479 GQS 481
G S
Sbjct: 673 GSS 675
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 192/455 (42%), Gaps = 50/455 (10%)
Query: 21 TRTQLTQIHAH-FLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPN---PNIILFN 76
T Q Q+HA L + S + A+ ISV A L + A VF ++ L+N
Sbjct: 68 TAQQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWN 127
Query: 77 SIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTT 136
SI+KA ++ L+ MR R ++ D + P +L+A L F L ++ H QV
Sbjct: 128 SILKANVSHGLYENALELYRGMRQ-RGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQ 186
Query: 137 LGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLEL 196
+G + V ++ LY RMGDA +F EM R+ + WN+MI+G+ + + E+ +++
Sbjct: 187 IGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKI 246
Query: 197 FRRMGDRSV----VSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCAR 252
F M V+W ++SC ++ K E+ L F M G L VCA
Sbjct: 247 FEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAE 306
Query: 253 LGAADVGEWIHSYANDKGF--------------------------LRDIVSVG----NSL 282
L A + E +H Y GF R I + G NSL
Sbjct: 307 LEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSL 366
Query: 283 VDFYCKCGNPQAGLSVFNEMP--------MRNVVSWNAMISGMAYNGMGEVGVGLFEDM- 333
+ + G LS+F+E+ NVV+W ++I G G G+ + F M
Sbjct: 367 ITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQ 426
Query: 334 VRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHV 393
V N T +L+ CA ++ GRE+ + ++ + + +V++ +CG +
Sbjct: 427 FSKVLANSVTICCILSICAELPALNLGREIHGHV-IRTSMSENILVQNALVNMYAKCGLL 485
Query: 394 REALDLIRSMPMEPTAALWGALLSACRTHGDREIA 428
E L+ + W +++ HG E A
Sbjct: 486 SEG-SLVFEAIRDKDLISWNSIIKGYGMHGFAEKA 519
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 156/468 (33%), Positives = 236/468 (50%), Gaps = 48/468 (10%)
Query: 24 QLTQIHAHFLRHGLHHSNQILAHFISVCA-SLHR-VPYATRVFNHSPNPNIILFNSIIKA 81
L QIH L + + I++ + V + SL + + +A + HS + +N + +
Sbjct: 28 HLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRG 87
Query: 82 CSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFAR 141
S S + ++S M+ R I P+ TFP LLKA ++ G+ + +V GF
Sbjct: 88 YSSSDSPVESIWVYSEMKR-RGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDF 146
Query: 142 HGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMG 201
V ++ LY C++ DA KVFDE M
Sbjct: 147 DVYVGNNLIHLYGTCKKTSDARKVFDE-------------------------------MT 175
Query: 202 DRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEW 261
+R+VVSWN +++ L + K F EM+ K F PD+ T+V +L C G +G+
Sbjct: 176 ERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKL 233
Query: 262 IHSYANDKGFLRDI---VSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMA 318
+HS + +R++ +G +LVD Y K G + VF M +NV +W+AMI G+A
Sbjct: 234 VHS----QVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLA 289
Query: 319 YNGMGEVGVGLFEDMVR--GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPK 376
G E + LF M++ V PN TF+GVL C+H GLVD G + F M ++ P
Sbjct: 290 QYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPM 349
Query: 377 LEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDRE---IAEIAAK 433
+ HYG +VD+LGR G + EA D I+ MP EP A +W LLSAC H D + I E K
Sbjct: 350 MIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKK 409
Query: 434 ELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
L+ +EP SG+ V+++N +AE W E +VR +M+E +KK+ G+S
Sbjct: 410 RLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGES 457
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 245 bits (626), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 154/463 (33%), Positives = 238/463 (51%), Gaps = 39/463 (8%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
Q H G + + I + ++ ++ A +VF+ P NI+ + S+I+ L+
Sbjct: 97 QTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNG 156
Query: 87 PFQQCFHLFSLM-----RNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFAR 141
LF + + A+ D S++ A S + L +S+H+ V GF R
Sbjct: 157 NALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDR 216
Query: 142 HGPVRVGVVELYANCERMGDA--GKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRR 199
V +++ YA G A K+FD++ ++D + +N ++ Y + G E+FRR
Sbjct: 217 GVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRR 276
Query: 200 MGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVG 259
+ VV++N + TL TVL + GA +G
Sbjct: 277 LVKNKVVTFNAI------------------------------TLSTVLLAVSHSGALRIG 306
Query: 260 EWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAY 319
+ IH G L D V VG S++D YCKCG + F+ M +NV SW AMI+G
Sbjct: 307 KCIHDQVIRMG-LEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGM 365
Query: 320 NGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLE 378
+G + LF M+ GV PN TFV VLA C+HAGL G F++M +F + P LE
Sbjct: 366 HGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLE 425
Query: 379 HYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNV 438
HYGC+VDLLGR G +++A DLI+ M M+P + +W +LL+ACR H + E+AEI+ L +
Sbjct: 426 HYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFEL 485
Query: 439 EPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
+ N G+++LLS+IYA+ RW +VE+VR++M+ + K PG S
Sbjct: 486 DSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFS 528
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 188/392 (47%), Gaps = 45/392 (11%)
Query: 45 AHFISVCASLHRVPYATR-----VFN-HSPNPNIILFNSIIKACSLSPPFQQCFHLFSLM 98
A F SV LH + R +FN + ++ +NS+I + S + FS M
Sbjct: 8 ALFCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSM 67
Query: 99 RNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCER 158
R ++ P +FP +KA S+L D G+ H Q G+ V ++ +Y+ C +
Sbjct: 68 RKL-SLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGK 126
Query: 159 MGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKG 218
+ DA KVFDE+ +R+++ W MI+GY G + LF+ + L
Sbjct: 127 LEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDL--------------LVDE 172
Query: 219 KKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSV 278
+++A+ L D LV+V+ C+R+ A + E IHS+ +GF R VSV
Sbjct: 173 NDDDDAMFL-----------DSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRG-VSV 220
Query: 279 GNSLVDFYCKCGNPQAGLS--VFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRG 336
GN+L+D Y K G ++ +F+++ ++ VS+N+++S A +GM +F +V+
Sbjct: 221 GNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKN 280
Query: 337 --VTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHV- 393
VT N T VL +H+G + G+ + D + ++ L + ++D+ +CG V
Sbjct: 281 KVVTFNAITLSTVLLAVSHSGALRIGKCIHDQV-IRMGLEDDVIVGTSIIDMYCKCGRVE 339
Query: 394 --REALDLIRSMPMEPTAALWGALLSACRTHG 423
R+A D +++ + W A+++ HG
Sbjct: 340 TARKAFDRMKNKNVRS----WTAMIAGYGMHG 367
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 245 bits (626), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 130/330 (39%), Positives = 194/330 (58%), Gaps = 2/330 (0%)
Query: 153 YANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMI 212
Y R+ DA + F+ M + VI N MI G+ +VGE+ +F M DR +W MI
Sbjct: 244 YTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMI 303
Query: 213 SCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFL 272
+ E EAL LF +M ++G P +L+++L VCA L + G +H++ F
Sbjct: 304 KAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQF- 362
Query: 273 RDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFED 332
D V V + L+ Y KCG VF+ ++++ WN++ISG A +G+GE + +F +
Sbjct: 363 DDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHE 422
Query: 333 M-VRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCG 391
M G PN T + +L C++AG ++ G E+F+SM KF + P +EHY C VD+LGR G
Sbjct: 423 MPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAG 482
Query: 392 HVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSN 451
V +A++LI SM ++P A +WGALL AC+TH ++AE+AAK+L EP N+G +VLLS+
Sbjct: 483 QVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSS 542
Query: 452 IYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
I A +W +V VR MR ++ K PG S
Sbjct: 543 INASRSKWGDVAVVRKNMRTNNVSKFPGCS 572
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 116/265 (43%), Gaps = 22/265 (8%)
Query: 161 DAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKK 220
+A ++FDEM ER+V+ WN ++ GY K + +F M +R+VVSW M+ +
Sbjct: 66 EARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGM 125
Query: 221 EEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGN 280
EA LF M E+ ++ + + G D ++ D ++D+V+ N
Sbjct: 126 VGEAESLFWRMPER----NEVSWTVMFGGLIDDGRIDKARKLY----DMMPVKDVVASTN 177
Query: 281 SLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRGVTPN 340
++ C+ G +F+EM RNVV+W MI+G N +V LFE M
Sbjct: 178 -MIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPE---KT 233
Query: 341 DSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDL--LGRCGHVREALD 398
+ ++ +L +G ++ E F+ M +K P + +V +G R D
Sbjct: 234 EVSWTSMLLGYTLSGRIEDAEEFFEVMPMK----PVIACNAMIVGFGEVGEISKARRVFD 289
Query: 399 LIRSMPMEPTAALWGALLSACRTHG 423
L+ + A W ++ A G
Sbjct: 290 LME----DRDNATWRGMIKAYERKG 310
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 102/259 (39%), Gaps = 33/259 (12%)
Query: 57 VPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLK 116
+ A RVF+ + + + +IKA + LF+ M+ + + P + + S+L
Sbjct: 281 ISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQK-QGVRPSFPSLISILS 339
Query: 117 AASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIV 176
+ L Q G+ +HA + F V ++ +Y C + A VFD +D+I+
Sbjct: 340 VCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIM 399
Query: 177 WNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGF 236
WN +I GY G +G EEAL +F EM G
Sbjct: 400 WNSIISGYASHG-----------LG--------------------EEALKIFHEMPSSGT 428
Query: 237 EPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGL 296
P+ TL+ +L C+ G + G I K + V + VD + G +
Sbjct: 429 MPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAM 488
Query: 297 SVFNEMPMR-NVVSWNAMI 314
+ M ++ + W A++
Sbjct: 489 ELIESMTIKPDATVWGALL 507
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 245 bits (625), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 138/364 (37%), Positives = 209/364 (57%), Gaps = 34/364 (9%)
Query: 153 YANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMI 212
Y R+ DA K+FD M E+ + W M+ GY + G +E ELF M + V++ N MI
Sbjct: 213 YGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMI 272
Query: 213 SCL------AKGKK-------------------------EEEALVLFREMLEKGFEPDDA 241
S L AK ++ E EAL LF M ++G P
Sbjct: 273 SGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFP 332
Query: 242 TLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNE 301
TL+++L VCA L + G+ +H+ F D V V + L+ Y KCG +F+
Sbjct: 333 TLISILSVCASLASLHHGKQVHAQLVRCQFDVD-VYVASVLMTMYIKCGELVKSKLIFDR 391
Query: 302 MPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVT-PNDSTFVGVLACCAHAGLVDR 359
P ++++ WN++ISG A +G+GE + +F +M + G T PN+ TFV L+ C++AG+V+
Sbjct: 392 FPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEE 451
Query: 360 GRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSAC 419
G ++++SM F + P HY C+VD+LGR G EA+++I SM +EP AA+WG+LL AC
Sbjct: 452 GLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGAC 511
Query: 420 RTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPG 479
RTH ++AE AK+L+ +EP NSG ++LLSN+YA + RW +V ++R LM+ ++K PG
Sbjct: 512 RTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPG 571
Query: 480 QSAT 483
S T
Sbjct: 572 CSWT 575
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 120/263 (45%), Gaps = 18/263 (6%)
Query: 161 DAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKK 220
DA K+FDEM +R++I WN ++ GY K GE++ ++F M +R+VVSW ++ K
Sbjct: 66 DARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGK 125
Query: 221 EEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGN 280
+ A LF +M EK L+ L + G D ++ DK +
Sbjct: 126 VDVAESLFWKMPEKNKVSWTVMLIGFL----QDGRIDDACKLYEMIPDKDNI-----ART 176
Query: 281 SLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRGVTPN 340
S++ CK G +F+EM R+V++W M++G N + +F+ M
Sbjct: 177 SMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPE---KT 233
Query: 341 DSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLI 400
+ ++ +L G ++ ELF+ M VK P + ++ LG+ G + +A +
Sbjct: 234 EVSWTSMLMGYVQNGRIEDAEELFEVMPVK----PVIA-CNAMISGLGQKGEIAKARRVF 288
Query: 401 RSMPMEPTAALWGALLSACRTHG 423
SM E A W ++ +G
Sbjct: 289 DSMK-ERNDASWQTVIKIHERNG 310
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 159/365 (43%), Gaps = 21/365 (5%)
Query: 60 ATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAAS 119
A ++F+ P+ NII +N ++ + + +F LM +S + +L+K
Sbjct: 67 ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVS-----WTALVKGYV 121
Query: 120 NLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNL 179
+ + +SL ++ + +G + R+ DA K+++ + ++D I
Sbjct: 122 HNGKVDVAESLFWKMPEKNKVSWTVMLIG----FLQDGRIDDACKLYEMIPDKDNIARTS 177
Query: 180 MIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPD 239
MI G CK G ++ E+F M +RSV++W M++ + + ++A +F M EK
Sbjct: 178 MIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKT---- 233
Query: 240 DATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVF 299
+ + ++L + G + E + K V N+++ + G VF
Sbjct: 234 EVSWTSMLMGYVQNGRIEDAEELFEVMPVKP-----VIACNAMISGLGQKGEIAKARRVF 288
Query: 300 NEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVD 358
+ M RN SW +I NG + LF M + GV P T + +L+ CA +
Sbjct: 289 DSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLH 348
Query: 359 RGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSA 418
G+++ + V+ Q + ++ + +CG + ++ + P + +W +++S
Sbjct: 349 HGKQVHAQL-VRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDI-IMWNSIISG 406
Query: 419 CRTHG 423
+HG
Sbjct: 407 YASHG 411
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 115/291 (39%), Gaps = 34/291 (11%)
Query: 57 VPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLK 116
+ A RVF+ N + ++IK + + LF LM+ + + P + T S+L
Sbjct: 281 IAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQK-QGVRPTFPTLISILS 339
Query: 117 AASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIV 176
++L G+ +HAQ+ F V ++ +Y C + + +FD +D+I+
Sbjct: 340 VCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIM 399
Query: 177 WNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREM-LEKG 235
WN +I GY G +G EEAL +F EM L
Sbjct: 400 WNSIISGYASHG-----------LG--------------------EEALKVFCEMPLSGS 428
Query: 236 FEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAG 295
+P++ T V L C+ G + G I+ ++ I + +VD + G
Sbjct: 429 TKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEA 488
Query: 296 LSVFNEMPMR-NVVSWNAMISGMAYNGMGEVGVGLFEDMVRGVTPNDSTFV 345
+ + + M + + W +++ + +V + ++ N T++
Sbjct: 489 MEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYI 539
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 107/291 (36%), Gaps = 78/291 (26%)
Query: 178 NLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFE 237
N+ I ++G++ +LF +S+ SWN M++ +A LF EM
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------ 74
Query: 238 PDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLS 297
PD R+I+S N LV Y K G
Sbjct: 75 PD---------------------------------RNIIS-WNGLVSGYMKNGEIDEARK 100
Query: 298 VFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVL-------A 349
VF+ MP RNVVSW A++ G +NG +V LF M + +G L A
Sbjct: 101 VFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDA 160
Query: 350 CCAH--------------------AGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGR 389
C + G VD RE+FD M+ + + + +V G+
Sbjct: 161 CKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVIT-----WTTMVTGYGQ 215
Query: 390 CGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEP 440
V +A + MP E T W ++L +G E AE EL V P
Sbjct: 216 NNRVDDARKIFDVMP-EKTEVSWTSMLMGYVQNGRIEDAE----ELFEVMP 261
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 85/202 (42%), Gaps = 24/202 (11%)
Query: 276 VSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR 335
+S NS+V Y P+ +F+EMP RN++SWN ++SG NG + +F+ M
Sbjct: 48 ISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPE 107
Query: 336 GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLG--RCGHV 393
N ++ ++ H G VD LF M P+ V L+G + G +
Sbjct: 108 ---RNVVSWTALVKGYVHNGKVDVAESLFWKM-------PEKNKVSWTVMLIGFLQDGRI 157
Query: 394 REALDLIRSMPMEPTAALWGALLSAC---RTHGDREI-AEIAAKELVNVEPWNSGHHVLL 449
+A L +P + A + C R REI E++ + ++ +G
Sbjct: 158 DDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTG----- 212
Query: 450 SNIYAEEMRWDEVEKVRVLMRE 471
Y + R D+ K+ +M E
Sbjct: 213 ---YGQNNRVDDARKIFDVMPE 231
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 244 bits (624), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 147/460 (31%), Positives = 240/460 (52%), Gaps = 38/460 (8%)
Query: 26 TQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACS-- 83
TQ+HA+ ++ L + + + I + A + A +VF+ +++LFN++I+ S
Sbjct: 370 TQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRL 429
Query: 84 -LSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARH 142
+ ++F MR R I P TF SLL+A+++L L + +H + G
Sbjct: 430 GTQWELHEALNIFRDMR-FRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLD 488
Query: 143 GPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGD 202
++++Y+NC + D+ VFDEM+ +D+++W
Sbjct: 489 IFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIW------------------------- 523
Query: 203 RSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWI 262
N M + + + EEAL LF E+ PD+ T ++ L + +G+
Sbjct: 524 ------NSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEF 577
Query: 263 HSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGM 322
H +G L + N+L+D Y KCG+P+ F+ R+VV WN++IS A +G
Sbjct: 578 HCQLLKRG-LECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGE 636
Query: 323 GEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYG 381
G+ + + E M+ G+ PN TFVGVL+ C+HAGLV+ G + F+ M ++F + P+ EHY
Sbjct: 637 GKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELM-LRFGIEPETEHYV 695
Query: 382 CVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPW 441
C+V LLGR G + +A +LI MP +P A +W +LLS C G+ E+AE AA+ + +P
Sbjct: 696 CMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPK 755
Query: 442 NSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
+SG +LSNIYA + W E +KVR M+ + K PG+S
Sbjct: 756 DSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRS 795
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 161/372 (43%), Gaps = 36/372 (9%)
Query: 28 IHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPP 87
+H + GL + I++ + + YA +VF P N++ +++++ AC+
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 88 FQQCFHLFSLMRNARAISPDYFTFPSLLKAASNL--RDFQLGQSLHAQVTTLGFARHGPV 145
+++ +F R SP+ + S ++A S L R + L + + GF R V
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185
Query: 146 RVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSV 205
+++ Y + A VFD + E+ + W MI G K+G RS
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMG--------------RSY 231
Query: 206 VSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSY 265
VS L LF +++E PD L TVL C+ L + G+ IH++
Sbjct: 232 VS-----------------LQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAH 274
Query: 266 ANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEV 325
G D S+ N L+D Y KCG A +FN MP +N++SW ++SG N + +
Sbjct: 275 ILRYGLEMD-ASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKE 333
Query: 326 GVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVV 384
+ LF M + G+ P+ +L CA + G ++ + +K L ++
Sbjct: 334 AMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQV-HAYTIKANLGNDSYVTNSLI 392
Query: 385 DLLGRCGHVREA 396
D+ +C + +A
Sbjct: 393 DMYAKCDCLTDA 404
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 172/416 (41%), Gaps = 45/416 (10%)
Query: 20 KTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSII 79
+ R + Q+ + ++ G + I + YA VF+ P + + + ++I
Sbjct: 162 RGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMI 221
Query: 80 KAC-SLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLG 138
C + + + LM + + PD + ++L A S L + G+ +HA + G
Sbjct: 222 SGCVKMGRSYVSLQLFYQLMEDN--VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYG 279
Query: 139 FARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFR 198
E D + N++I Y K G + +LF
Sbjct: 280 L-------------------------------EMDASLMNVLIDSYVKCGRVIAAHKLFN 308
Query: 199 RMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADV 258
M +++++SW ++S + +EA+ LF M + G +PD ++L CA L A
Sbjct: 309 GMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGF 368
Query: 259 GEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMA 318
G +H+Y K L + V NSL+D Y KC VF+ +VV +NAMI G
Sbjct: 369 GTQVHAY-TIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEG-- 425
Query: 319 YNGMGEV-----GVGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQ 372
Y+ +G + +F DM R + P+ TFV +L A + +++ M K+
Sbjct: 426 YSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLM-FKYG 484
Query: 373 LLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIA 428
L + ++D+ C ++++ + M ++ +W ++ + + E A
Sbjct: 485 LNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDL-VIWNSMFAGYVQQSENEEA 539
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 124/259 (47%), Gaps = 11/259 (4%)
Query: 171 ERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFRE 230
E D + N++I Y + G + ++F +M +R++VSW+ M+S EE+LV+F E
Sbjct: 76 ELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLE 135
Query: 231 MLE-KGFEPDDATLVTVLPVCARLGAADVGEW----IHSYANDKGFLRDIVSVGNSLVDF 285
+ P++ L + + C+ L G W + S+ GF RD V VG L+DF
Sbjct: 136 FWRTRKDSPNEYILSSFIQACSGLDGR--GRWMVFQLQSFLVKSGFDRD-VYVGTLLIDF 192
Query: 286 YCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTF 344
Y K GN VF+ +P ++ V+W MISG G V + LF ++ V P+
Sbjct: 193 YLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYIL 252
Query: 345 VGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMP 404
VL+ C+ ++ G+++ + +++ L ++D +CG V A L MP
Sbjct: 253 STVLSACSILPFLEGGKQI-HAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP 311
Query: 405 MEPTAALWGALLSACRTHG 423
+ + W LLS + +
Sbjct: 312 NKNIIS-WTTLLSGYKQNA 329
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 144/456 (31%), Positives = 230/456 (50%), Gaps = 34/456 (7%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
+IH + +R G I + + A + A ++F+ N++ +NS+I A +
Sbjct: 257 EIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNE 316
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
++ +F M + + P + L A ++L D + G+ +H LG
Sbjct: 317 NPKEAMLIFQKMLD-EGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGL------- 368
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
+R+V V N +I YCK E++T +F ++ R++V
Sbjct: 369 ------------------------DRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLV 404
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA 266
SWN MI A+ + +AL F +M + +PD T V+V+ A L +WIH
Sbjct: 405 SWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVV 464
Query: 267 NDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVG 326
+ L V V +LVD Y KCG +F+ M R+V +WNAMI G +G G+
Sbjct: 465 M-RSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAA 523
Query: 327 VGLFEDMVRG-VTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVD 385
+ LFE+M +G + PN TF+ V++ C+H+GLV+ G + F M + + ++HYG +VD
Sbjct: 524 LELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVD 583
Query: 386 LLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGH 445
LLGR G + EA D I MP++P ++GA+L AC+ H + AE AA+ L + P + G+
Sbjct: 584 LLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGY 643
Query: 446 HVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
HVLL+NIY W++V +VRV M ++K PG S
Sbjct: 644 HVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCS 679
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 182/398 (45%), Gaps = 36/398 (9%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
+IH ++ G + ++ A +V A +VF+ P +++ +N+I+ S +
Sbjct: 156 EIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNG 215
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
+ + M + P + T S+L A S LR +G+ +H GF +
Sbjct: 216 MARMALEMVKSMCEEN-LKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIS 274
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
+V++YA C G LET +LF M +R+VV
Sbjct: 275 TALVDMYAKC-------------------------------GSLETARQLFDGMLERNVV 303
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA 266
SWN MI + + +EA+++F++ML++G +P D +++ L CA LG + G +IH +
Sbjct: 304 SWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLS 363
Query: 267 NDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVG 326
+ G R+ VSV NSL+ YCKC S+F ++ R +VSWNAMI G A NG
Sbjct: 364 VELGLDRN-VSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDA 422
Query: 327 VGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVD 385
+ F M R V P+ T+V V+ A + + + + ++ L + +VD
Sbjct: 423 LNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI-HGVVMRSCLDKNVFVTTALVD 481
Query: 386 LLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHG 423
+ +CG + A LI M E W A++ THG
Sbjct: 482 MYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYGTHG 518
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 181/403 (44%), Gaps = 36/403 (8%)
Query: 15 LLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIIL 74
LL + +L QI ++GL+ + +S+ V A RVF + +L
Sbjct: 43 LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVL 102
Query: 75 FNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQV 134
+++++K + + F MR + P + F LLK + + ++G+ +H +
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMR-YDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLL 161
Query: 135 TTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGL 194
GF+ G+ +YA C ++ +A KVFD M ERD++ WN ++ GY + G L
Sbjct: 162 VKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMAL 221
Query: 195 ELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLG 254
E + + M E+ +P T+V+VLP + L
Sbjct: 222 E-------------------------------MVKSMCEENLKPSFITIVSVLPAVSALR 250
Query: 255 AADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMI 314
VG+ IH YA GF +V++ +LVD Y KCG+ + +F+ M RNVVSWN+MI
Sbjct: 251 LISVGKEIHGYAMRSGF-DSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMI 309
Query: 315 SGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQL 373
N + + +F+ M+ GV P D + +G L CA G ++RGR ++V+ L
Sbjct: 310 DAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGR-FIHKLSVELGL 368
Query: 374 LPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALL 416
+ ++ + +C V A + + T W A++
Sbjct: 369 DRNVSVVNSLISMYCKCKEVDTAASMFGKL-QSRTLVSWNAMI 410
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 127/318 (39%), Gaps = 36/318 (11%)
Query: 1 MSKGLQQIERRILSLLHGAKTRTQLTQ---IHAHFLRHGLHHSNQILAHFISVCASLHRV 57
+ +G++ + ++ LH L + IH + GL + ++ IS+ V
Sbjct: 329 LDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEV 388
Query: 58 PYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKA 117
A +F + ++ +N++I + + + FS MR +R + PD FT+ S++ A
Sbjct: 389 DTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMR-SRTVKPDTFTYVSVITA 447
Query: 118 ASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVW 177
+ L + +H V ++ V +V++YA C + A +FD M ER V W
Sbjct: 448 IAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTW 507
Query: 178 NLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFE 237
N MI GY G + LE LF EM + +
Sbjct: 508 NAMIDGYGTHGFGKAALE-------------------------------LFEEMQKGTIK 536
Query: 238 PDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLS 297
P+ T ++V+ C+ G + G + + + ++VD + G
Sbjct: 537 PNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWD 596
Query: 298 VFNEMPMRNVVS-WNAMI 314
+MP++ V+ + AM+
Sbjct: 597 FIMQMPVKPAVNVYGAML 614
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 147/456 (32%), Positives = 242/456 (53%), Gaps = 35/456 (7%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
++HA+ ++HG + Q+ I + + + Y R F + ++I + ++I + +
Sbjct: 407 ELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQND 466
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
+ LF + R + D S+L+A+S L+ + + +H + G ++
Sbjct: 467 CHVEALELFRDVAKKR-MEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL-DTVIQ 524
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
+V++Y C MG A +VF+ ++ +DV V
Sbjct: 525 NELVDVYGKCRNMGYATRVFESIKGKDV-------------------------------V 553
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA 266
SW MIS A E EA+ LFR M+E G D L+ +L A L A + G IH Y
Sbjct: 554 SWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYL 613
Query: 267 NDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVG 326
KGF + S+ ++VD Y CG+ Q+ +VF+ + + ++ + +MI+ +G G+
Sbjct: 614 LRKGFCLE-GSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAA 672
Query: 327 VGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVD 385
V LF+ M V+P+ +F+ +L C+HAGL+D GR M +++L P EHY C+VD
Sbjct: 673 VELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVD 732
Query: 386 LLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGH 445
+LGR V EA + ++ M EPTA +W ALL+ACR+H ++EI EIAA+ L+ +EP N G+
Sbjct: 733 MLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGN 792
Query: 446 HVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
VL+SN++AE+ RW++VEKVR M+ ++K PG S
Sbjct: 793 LVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCS 828
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 168/373 (45%), Gaps = 39/373 (10%)
Query: 27 QIHAHFLRHGLHHSNQILAH-FISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLS 85
+IHA L+ H S + + I++ ++P A R+ N +++ +NS+IK +
Sbjct: 305 EIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQN 364
Query: 86 PPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPV 145
+++ FS M A S D + S++ A+ L + G LHA V G+ + V
Sbjct: 365 LMYKEALEFFSDMIAAGHKS-DEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQV 423
Query: 146 RVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSV 205
++++Y+ C G+ F M ++D+I W +I GY
Sbjct: 424 GNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGY--------------------- 462
Query: 206 VSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSY 265
A+ EAL LFR++ +K E D+ L ++L + L + + + IH +
Sbjct: 463 ----------AQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCH 512
Query: 266 ANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEV 325
KG L ++ N LVD Y KC N VF + ++VVSW +MIS A NG
Sbjct: 513 ILRKGLLDTVIQ--NELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESE 570
Query: 326 GVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVK-FQLLPKLEHYGCV 383
V LF MV G++ + + +L+ A +++GRE+ + K F L + V
Sbjct: 571 AVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIA--VAV 628
Query: 384 VDLLGRCGHVREA 396
VD+ CG ++ A
Sbjct: 629 VDMYACCGDLQSA 641
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 148/343 (43%), Gaps = 40/343 (11%)
Query: 51 CASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFT 110
C SL A +VF+ P+ +N++I A + L+ MR + +
Sbjct: 129 CGSLDD---AEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMR-VEGVPLGLSS 184
Query: 111 FPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMR 170
FP+LLKA + LRD + G LH+ + LG+ G + +V +YA + + A ++FD +
Sbjct: 185 FPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQ 244
Query: 171 ER-DVIVWNLMIQGYCKVGE-LETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLF 228
E+ D ++WN ++ Y G+ LET L LF
Sbjct: 245 EKGDAVLWNSILSSYSTSGKSLET--------------------------------LELF 272
Query: 229 REMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCK 288
REM G P+ T+V+ L C A +G+ IH+ + V N+L+ Y +
Sbjct: 273 REMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTR 332
Query: 289 CGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGV 347
CG + +M +VV+WN++I G N M + + F DM+ G ++ + +
Sbjct: 333 CGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSI 392
Query: 348 LACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRC 390
+A + G EL + +K L+ ++D+ +C
Sbjct: 393 IAASGRLSNLLAGMEL-HAYVIKHGWDSNLQVGNTLIDMYSKC 434
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/415 (22%), Positives = 180/415 (43%), Gaps = 57/415 (13%)
Query: 26 TQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFN-HSPNPNIILFNSIIKACSL 84
+++H+ ++ G H + I+ +S+ A + A R+F+ + +L+NSI+ + S
Sbjct: 202 SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYST 261
Query: 85 SPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGP 144
S + LF M + +P+ +T S L A +LG+ +HA V L + H
Sbjct: 262 SGKSLETLELFREM-HMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASV--LKSSTHSS 318
Query: 145 ---VRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMG 201
V ++ +Y C +M A ++ +M DV+ WN +I+GY +
Sbjct: 319 ELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQ--------------- 363
Query: 202 DRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEW 261
NLM +EAL F +M+ G + D+ ++ +++ RL G
Sbjct: 364 -------NLMY---------KEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGME 407
Query: 262 IHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNG 321
+H+Y G+ ++ VGN+L+D Y KC F M ++++SW +I+G A N
Sbjct: 408 LHAYVIKHGWDSNL-QVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQND 466
Query: 322 MGEVGVGLFEDMVRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYG 381
+ LF D+ + D +G + R + SM + ++ + G
Sbjct: 467 CHVEALELFRDVAKKRMEIDEMILGSIL---------RASSVLKSMLIVKEIHCHILRKG 517
Query: 382 C--------VVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIA 428
+VD+ G+C ++ A + S+ + + W +++S+ +G+ A
Sbjct: 518 LLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVS-WTSMISSSALNGNESEA 571
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 135/352 (38%), Gaps = 49/352 (13%)
Query: 68 PNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLG 127
P+P + F+ ++ + F + N + F +L+ R G
Sbjct: 53 PSPKLACFDGVL---------TEAFQRLDVSENNSPVE----AFAYVLELCGKRRAVSQG 99
Query: 128 QSLHAQVTTLGFARHGPVRVG-VVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCK 186
+ LH+++ + G +V +Y C + DA KVFDEM +R WN MI Y
Sbjct: 100 RQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVS 159
Query: 187 VGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTV 246
GE + L L+ WN+ + + G AL
Sbjct: 160 NGEPASALALY----------WNMRVEGVPLGLSSFPAL--------------------- 188
Query: 247 LPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR- 305
L CA+L G +HS G+ + N+LV Y K + A +F+ +
Sbjct: 189 LKACAKLRDIRSGSELHSLLVKLGY-HSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKG 247
Query: 306 NVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVDRGRELF 364
+ V WN+++S + +G + LF +M + G PN T V L C G+E+
Sbjct: 248 DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIH 307
Query: 365 DSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALL 416
S+ +L ++ + RCG + +A ++R M W +L+
Sbjct: 308 ASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLI 358
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 6/209 (2%)
Query: 1 MSKGLQQIERRIL-SLLHGA---KTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHR 56
++K +I+ IL S+L + K+ + +IH H LR GL + I + V
Sbjct: 478 VAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDT-VIQNELVDVYGKCRN 536
Query: 57 VPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLK 116
+ YATRVF +++ + S+I + +L+ + LF M +S D +L
Sbjct: 537 MGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVET-GLSADSVALLCILS 595
Query: 117 AASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIV 176
AA++L G+ +H + GF G + V VV++YA C + A VFD + + ++
Sbjct: 596 AAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQ 655
Query: 177 WNLMIQGYCKVGELETGLELFRRMGDRSV 205
+ MI Y G + +ELF +M +V
Sbjct: 656 YTSMINAYGMHGCGKAAVELFDKMRHENV 684
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 139/455 (30%), Positives = 225/455 (49%), Gaps = 34/455 (7%)
Query: 28 IHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPP 87
I+ + L+ G + + I V A + A VFN + + +NSII S
Sbjct: 329 IYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGD 388
Query: 88 FQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRV 147
+ LF +M D+ T+ L+ ++ L D + G+ LH+ ++
Sbjct: 389 LMEAMKLFKMMMIMEE-QADHITYLMLISVSTRLADLKFGKGLHSN----------GIKS 437
Query: 148 GVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVS 207
G+ D+ V N +I Y K GE+ L++F MG V+
Sbjct: 438 GIC---------------------IDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVT 476
Query: 208 WNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYAN 267
WN +IS + L + +M + PD AT + LP+CA L A +G+ IH
Sbjct: 477 WNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLL 536
Query: 268 DKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGV 327
G+ ++ +GN+L++ Y KCG + VF M R+VV+W MI G GE +
Sbjct: 537 RFGYESEL-QIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKAL 595
Query: 328 GLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDL 386
F DM + G+ P+ F+ ++ C+H+GLVD G F+ M +++ P +EHY CVVDL
Sbjct: 596 ETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDL 655
Query: 387 LGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGHH 446
L R + +A + I++MP++P A++W ++L ACRT GD E AE ++ ++ + P + G+
Sbjct: 656 LSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYS 715
Query: 447 VLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
+L SN YA +WD+V +R +++ HI K PG S
Sbjct: 716 ILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYS 750
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 187/410 (45%), Gaps = 36/410 (8%)
Query: 16 LHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNH-SPNPNIIL 74
L + +L +IHA + GL S+ I + + VF SP N+ L
Sbjct: 14 LSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYL 73
Query: 75 FNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQV 134
+NSII+A S + F + + +R ++ +SPD +TFPS++KA + L D ++G ++ Q+
Sbjct: 74 WNSIIRAFSKNGLFPEALEFYGKLRESK-VSPDKYTFPSVIKACAGLFDAEMGDLVYEQI 132
Query: 135 TTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGL 194
+GF E D+ V N ++ Y ++G L
Sbjct: 133 LDMGF-------------------------------ESDLFVGNALVDMYSRMGLLTRAR 161
Query: 195 ELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLG 254
++F M R +VSWN +IS + EEAL ++ E+ PD T+ +VLP L
Sbjct: 162 QVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLL 221
Query: 255 AADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMI 314
G+ +H +A K + +V V N LV Y K P VF+EM +R+ VS+N MI
Sbjct: 222 VVKQGQGLHGFAL-KSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMI 280
Query: 315 SGMAYNGMGEVGVGLFEDMVRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLL 374
G M E V +F + + P+ T VL C H + + +++ M +K +
Sbjct: 281 CGYLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYM-LKAGFV 339
Query: 375 PKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGD 424
+ ++D+ +CG + A D+ SM + T + W +++S GD
Sbjct: 340 LESTVRNILIDVYAKCGDMITARDVFNSMECKDTVS-WNSIISGYIQSGD 388
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 171/366 (46%), Gaps = 37/366 (10%)
Query: 60 ATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAAS 119
A +VF+ P +++ +NS+I S +++ ++ ++N+ I PD FT S+L A
Sbjct: 160 ARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNS-WIVPDSFTVSSVLPAFG 218
Query: 120 NLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNL 179
NL + GQ LH G V G+V +Y R DA +VFDEM RD
Sbjct: 219 NLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDS----- 273
Query: 180 MIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPD 239
VS+N MI K + EE++ +F E L++ F+PD
Sbjct: 274 --------------------------VSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPD 306
Query: 240 DATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVF 299
T+ +VL C L + ++I++Y GF+ + +V N L+D Y KCG+ VF
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLE-STVRNILIDVYAKCGDMITARDVF 365
Query: 300 NEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRGVTPNDS-TFVGVLACCAHAGLVD 358
N M ++ VSWN++ISG +G + LF+ M+ D T++ +++ +
Sbjct: 366 NSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLK 425
Query: 359 RGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSA 418
G+ L S +K + L ++D+ +CG V ++L + SM T W ++SA
Sbjct: 426 FGKGLH-SNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVT-WNTVISA 483
Query: 419 CRTHGD 424
C GD
Sbjct: 484 CVRFGD 489
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 144/460 (31%), Positives = 231/460 (50%), Gaps = 33/460 (7%)
Query: 54 LHRVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPS 113
+ R+ A +F+ N+I + ++I + F+ F LF MR + + T
Sbjct: 221 MGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAV 280
Query: 114 LLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERD 173
+ KA + ++ G +H V+ + + ++ +Y+ MG+A VF M+ +D
Sbjct: 281 MFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKD 340
Query: 174 VIVWNL-------------------------------MIQGYCKVGELETGLELFRRMGD 202
+ WN MI+G+ GE+ +ELF M +
Sbjct: 341 SVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPE 400
Query: 203 RSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWI 262
+ ++W MIS EEAL F +ML+K P+ T +VL A L G I
Sbjct: 401 KDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQI 460
Query: 263 HSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGM 322
H + D+ SV NSLV YCKCGN +F+ + N+VS+N MISG +YNG
Sbjct: 461 HGRVVKMNIVNDL-SVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGF 519
Query: 323 GEVGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYG 381
G+ + LF + G PN TF+ +L+ C H G VD G + F SM + + P +HY
Sbjct: 520 GKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYA 579
Query: 382 CVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPW 441
C+VDLLGR G + +A +LI +MP +P + +WG+LLSA +TH ++AE+AAK+L+ +EP
Sbjct: 580 CMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPD 639
Query: 442 NSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
++ +V+LS +Y+ + + +++ + + IKK PG S
Sbjct: 640 SATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSS 679
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/445 (22%), Positives = 180/445 (40%), Gaps = 48/445 (10%)
Query: 6 QQIERRILSLLHGAKTRTQLTQIHAHFLRHG----LHHSNQILAHF-----------ISV 50
+ I ++ + L T T + Q ++ +H L + I IS
Sbjct: 31 EPITQKTRNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISA 90
Query: 51 CASLHRVPYATRVFNHSPNPNIILFNSIIKA-----CSLSPPFQQCFHLFSLMRNARAIS 105
A ++ A +VF+ P +N++I A C L + + LF + A+S
Sbjct: 91 YAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLG----KAYELFCDIPEKNAVS 146
Query: 106 PDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKV 165
+ +++ F + L+A+ T + F R ++ Y + +A +V
Sbjct: 147 -----YATMITGFVRAGRFDEAEFLYAE-TPVKF-RDSVASNVLLSGYLRAGKWNEAVRV 199
Query: 166 FDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEAL 225
F M ++V+ + M+ GYCK+G + LF RM +R+V++W MI K E+
Sbjct: 200 FQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGF 259
Query: 226 VLFREMLEKG-FEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVD 284
LF M ++G + + TL + C G IH + D+ +GNSL+
Sbjct: 260 GLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLF-LGNSLMS 318
Query: 285 FYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRGVTPNDS-- 342
Y K G +VF M ++ VSWN++I+G+ LFE M P
Sbjct: 319 MYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM-----PGKDMV 373
Query: 343 TFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRS 402
++ ++ + G + + ELF M K + + ++ G+ EAL
Sbjct: 374 SWTDMIKGFSGKGEISKCVELFGMMPEKDNIT-----WTAMISAFVSNGYYEEALCWFHK 428
Query: 403 MPME---PTAALWGALLSACRTHGD 424
M + P + + ++LSA + D
Sbjct: 429 MLQKEVCPNSYTFSSVLSATASLAD 453
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 241 bits (615), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 143/472 (30%), Positives = 237/472 (50%), Gaps = 10/472 (2%)
Query: 13 LSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNI 72
L+ + + T L Q+HA + G + + + Y ++ +
Sbjct: 26 FKLVEDSNSITHLFQVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIGK--L 83
Query: 73 ILFNSIIKACSLSP-PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLH 131
N + KA +S P Q F ++R PD +TF SL+ G+ H
Sbjct: 84 YCANPVFKAYLVSSSPKQALGFYFDILR--FGFVPDSYTFVSLISCIEKTCCVDSGKMCH 141
Query: 132 AQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELE 191
Q G + PV+ ++ +Y C + A K+F E+ +RD++ WN +I G + G++
Sbjct: 142 GQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVL 201
Query: 192 TGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCA 251
+LF M D++++SWN+MIS ++ LFREM+ GF+ +++TLV +L C
Sbjct: 202 AAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACG 261
Query: 252 RLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWN 311
R G +H+ + + FL V + +L+D Y KC +F+ + +RN V+WN
Sbjct: 262 RSARLKEGRSVHA-SLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWN 320
Query: 312 AMISGMAYNGMGEVGVGLFEDMVRG-VTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVK 370
MI +G E G+ LFE M+ G + P++ TFVGVL CA AGLV +G+ + M +
Sbjct: 321 VMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDE 380
Query: 371 FQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPME---PTAALWGALLSACRTHGDREI 427
FQ+ P H C+ +L G EA + ++++P E P + W LLS+ R G+ +
Sbjct: 381 FQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTL 440
Query: 428 AEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPG 479
E AK L+ +P N ++ LL NIY+ RW++V +VR +++E I ++PG
Sbjct: 441 GESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPG 492
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 241 bits (615), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 153/523 (29%), Positives = 257/523 (49%), Gaps = 75/523 (14%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKA----- 81
QIH + LR GL + + I + + ++ + +VFN + N+ +NSI+ +
Sbjct: 110 QIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLG 169
Query: 82 --------------CSLSPPFQQCFHLFS------LMRNARAI---------SPDYFTFP 112
C L P L S L ++A A+ P +
Sbjct: 170 YVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSIS 229
Query: 113 SLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRER 172
SLL+A + +LG+++H + V ++++Y + A VFD M +
Sbjct: 230 SLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAK 289
Query: 173 DVIVWN-----------------LMIQ------------------GYCKVGELETGLELF 197
+++ WN LMI+ GY +G+ E L++
Sbjct: 290 NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVI 349
Query: 198 RRMGDR----SVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARL 253
+M ++ +VVSW + S +K AL +F +M E+G P+ AT+ T+L + L
Sbjct: 350 GKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCL 409
Query: 254 GAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAM 313
G+ +H + K + D V +LVD Y K G+ Q+ + +F + +++ SWN M
Sbjct: 410 SLLHSGKEVHGFCLRKNLICD-AYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCM 468
Query: 314 ISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQ 372
+ G A G GE G+ F M+ G+ P+ TF VL+ C ++GLV G + FD M ++
Sbjct: 469 LMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYG 528
Query: 373 LLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAA 432
++P +EH C+VDLLGR G++ EA D I++M ++P A +WGA LS+C+ H D E+AEIA
Sbjct: 529 IIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAW 588
Query: 433 KELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIK 475
K L +EP NS +++++ N+Y+ RW++VE++R LMR ++
Sbjct: 589 KRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVR 631
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 188/401 (46%), Gaps = 18/401 (4%)
Query: 28 IHAHFLRHGLHHSNQILAH----FISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACS 83
IH ++ GL +S+ + F C SL +A ++F+ P + + +N I+
Sbjct: 9 IHGGLIKRGLDNSDTRVVSASMGFYGRCVSL---GFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 84 LSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHG 143
S +++ LF M+ + A + D T LL+ SN F G+ +H V LG +
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDS-TMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNV 124
Query: 144 PVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMG-- 201
+ ++ +Y+ ++ + KVF+ M++R++ WN ++ Y K+G ++ + L M
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEIC 184
Query: 202 --DRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVG 259
+V+WN ++S A ++A+ + + M G +P +++ ++L A G +G
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLG 244
Query: 260 EWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAY 319
+ IH Y D V V +L+D Y K G VF+ M +N+V+WN+++SG++Y
Sbjct: 245 KAIHGYILRNQLWYD-VYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSY 303
Query: 320 NGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLE 378
+ + L M + G+ P+ T+ + + A G ++ ++ M K + P +
Sbjct: 304 ACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEK-GVAPNVV 362
Query: 379 HYGCVVDLLGRCGHVREALDLIRSMPME---PTAALWGALL 416
+ + + G+ R AL + M E P AA LL
Sbjct: 363 SWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 94/231 (40%), Gaps = 36/231 (15%)
Query: 258 VGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGM 317
+G IH +G V ++ + FY +C + +F+EMP R+ ++WN ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 318 AYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVDRGRELF------------ 364
+G E V LF +M G DST V +L C++ GR++
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNV 124
Query: 365 ---DSMAVKFQLLPKLE---------------HYGCVVDLLGRCGHVREALDLIRSMP-- 404
+S+ V + KLE + ++ + G+V +A+ L+ M
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEIC 184
Query: 405 -MEPTAALWGALLSACRTHG--DREIAEIAAKELVNVEPWNSGHHVLLSNI 452
++P W +LLS + G IA + ++ ++P S LL +
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAV 235
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 141/457 (30%), Positives = 229/457 (50%), Gaps = 40/457 (8%)
Query: 28 IHAHFLRHGLHHSNQILAHFISVCASLHRVPY-ATRVFNHSPNPNIILFNSIIKACSLSP 86
H + HG N ++ ++ ++R P A RVF+ P P++I + +++ A S +
Sbjct: 185 FHGVVITHGFEW-NHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKND 243
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
+++ LF M + + PD TF ++L A NLR + G+ +H ++ T G + V
Sbjct: 244 LYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVE 303
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
++++Y C G + ++F M ++ V
Sbjct: 304 SSLLDMYGKC-------------------------------GSVREARQVFNGMSKKNSV 332
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA 266
SW+ ++ + + E+A+ +FREM EK D TVL CA L A +G+ IH
Sbjct: 333 SWSALLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQY 388
Query: 267 NDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVG 326
+G +++ V ++L+D Y K G + V+++M +RN+++WNAM+S +A NG GE
Sbjct: 389 VRRGCFGNVI-VESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEA 447
Query: 327 VGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVD 385
V F DMV+ G+ P+ +F+ +L C H G+VD GR F MA + + P EHY C++D
Sbjct: 448 VSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMID 507
Query: 386 LLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGD-REIAEIAAKELVNVEPWNSG 444
LLGR G EA +L+ A+LWG LL C + D +AE AK ++ +EP
Sbjct: 508 LLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHM 567
Query: 445 HHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
+VLLSN+Y R + +R LM + K GQS
Sbjct: 568 SYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQS 604
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 176/426 (41%), Gaps = 47/426 (11%)
Query: 5 LQQIERRILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATR-V 63
L Q ++ S +HG Q HAH ++ GL + +S+ L TR V
Sbjct: 67 LLQTCNKVFSFIHG-------IQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRV 119
Query: 64 FNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRD 123
F+ + I + S++ + +F M + + + FT S +KA S L +
Sbjct: 120 FDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSF-GLDANEFTLSSAVKACSELGE 178
Query: 124 FQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQG 183
+LG+ H V T GF + + + LY DA +VFDEM E DVI W
Sbjct: 179 VRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICW------ 232
Query: 184 YCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLE-KGFEPDDAT 242
++S +K EEAL LF M KG PD +T
Sbjct: 233 -------------------------TAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGST 267
Query: 243 LVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEM 302
TVL C L G+ IH G ++V V +SL+D Y KCG+ + VFN M
Sbjct: 268 FGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVV-VESSLLDMYGKCGSVREARQVFNGM 326
Query: 303 PMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRGVTPNDSTFVGVLACCAHAGLVDRGRE 362
+N VSW+A++ G NG E + +F +M + F VL CA V G+E
Sbjct: 327 SKKNSVSWSALLGGYCQNGEHEKAIEIFREMEE---KDLYCFGTVLKACAGLAAVRLGKE 383
Query: 363 LFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTH 422
+ V+ + ++DL G+ G + A + M + W A+LSA +
Sbjct: 384 IHGQY-VRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMIT-WNAMLSALAQN 441
Query: 423 GDREIA 428
G E A
Sbjct: 442 GRGEEA 447
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 141/443 (31%), Positives = 229/443 (51%), Gaps = 39/443 (8%)
Query: 48 ISVCASLHR---VPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAI 104
ISV + R V R+F+ P P++ +N+++ S +++ F M+ + +
Sbjct: 354 ISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQ-FQNL 412
Query: 105 SPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGK 164
PD T +L + + LR + G+ +H V +++ + G++ +Y+ CE+M +
Sbjct: 413 KPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISEC 472
Query: 165 VFDE-MRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEE 223
+FD+ + E D+ WN MI G FR N++ + +
Sbjct: 473 IFDDCINELDIACWNSMISG-------------FRH---------NML---------DTK 501
Query: 224 ALVLFREMLEKG-FEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSL 282
AL+LFR M + P++ + TVL C+RL + G H G++ D V +L
Sbjct: 502 ALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSF-VETAL 560
Query: 283 VDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPND 341
D YCKCG + F+ + +N V WN MI G +NG G+ VGL+ M+ G P+
Sbjct: 561 TDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDG 620
Query: 342 STFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIR 401
TFV VL C+H+GLV+ G E+ SM + P+L+HY C+VD LGR G + +A L
Sbjct: 621 ITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAE 680
Query: 402 SMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDE 461
+ P + ++ LW LLS+CR HGD +A A++L+ ++P +S +VLLSN Y+ +WD+
Sbjct: 681 ATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDD 740
Query: 462 VEKVRVLMREGHIKKVPGQSATT 484
++ LM + + K PGQS TT
Sbjct: 741 SAALQGLMNKNRVHKTPGQSWTT 763
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 126/256 (49%), Gaps = 3/256 (1%)
Query: 111 FPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMR 170
SLL+ + R G+ +H + +G + +++LY C A KVFDEM
Sbjct: 9 LASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMS 68
Query: 171 ERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFRE 230
RDV WN + CKVG+L E+F M +R VVSWN MIS L + EE+ALV+++
Sbjct: 69 VRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKR 128
Query: 231 MLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCG 290
M+ GF P TL +VL C+++ G H A G ++I VGN+L+ Y KCG
Sbjct: 129 MVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIF-VGNALLSMYAKCG 187
Query: 291 N-PQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVL 348
G+ VF + N VS+ A+I G+A V +F M +GV + +L
Sbjct: 188 FIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNIL 247
Query: 349 ACCAHAGLVDRGRELF 364
+ A D E++
Sbjct: 248 SISAPREGCDSLSEIY 263
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 122/317 (38%), Gaps = 78/317 (24%)
Query: 57 VPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLK 116
V Y RVF PN + + ++I + + +F LM + + D ++L
Sbjct: 190 VDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLM-CEKGVQVDSVCLSNILS 248
Query: 117 AA---------SNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFD 167
+ S + +LG+ +H LGF + ++E+YA + M A +F
Sbjct: 249 ISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFA 308
Query: 168 EMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVL 227
EM E +V VSWN+MI + + ++++
Sbjct: 309 EMPEVNV-------------------------------VSWNIMIVGFGQEYRSDKSVEF 337
Query: 228 FREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYC 287
M + GF+P++ T ++VL C R
Sbjct: 338 LTRMRDSGFQPNEVTCISVLGACFR----------------------------------- 362
Query: 288 KCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVG 346
G+ + G +F+ +P +V +WNAM+SG + E + F M + + P+ +T
Sbjct: 363 -SGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSV 421
Query: 347 VLACCAHAGLVDRGREL 363
+L+ CA ++ G+++
Sbjct: 422 ILSSCARLRFLEGGKQI 438
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 147/485 (30%), Positives = 231/485 (47%), Gaps = 62/485 (12%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIK---ACS 83
QIH ++ G + + + + A++ + A +VF + N +++NS++ AC
Sbjct: 160 QIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACG 219
Query: 84 LSPPFQQCFH------------LFSLMRNARA--------------ISPDYFTFPSLLKA 117
+ Q F + L +N A + D + F S+L A
Sbjct: 220 MIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPA 279
Query: 118 ASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVW 177
L G+ +HA + F H + V
Sbjct: 280 CGGLGAINEGKQIHACIIRTNFQDH-------------------------------IYVG 308
Query: 178 NLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFE 237
+ +I YCK L +F RM ++VVSW M+ + + EEA+ +F +M G +
Sbjct: 309 SALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID 368
Query: 238 PDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLS 297
PD TL + CA + + + G H A G + V+V NSLV Y KCG+
Sbjct: 369 PDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIH-YVTVSNSLVTLYGKCGDIDDSTR 427
Query: 298 VFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGL 356
+FNEM +R+ VSW AM+S A G + LF+ MV+ G+ P+ T GV++ C+ AGL
Sbjct: 428 LFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGL 487
Query: 357 VDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALL 416
V++G+ F M ++ ++P + HY C++DL R G + EA+ I MP P A W LL
Sbjct: 488 VEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLL 547
Query: 417 SACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKK 476
SACR G+ EI + AA+ L+ ++P + + LLS+IYA + +WD V ++R MRE ++KK
Sbjct: 548 SACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKK 607
Query: 477 VPGQS 481
PGQS
Sbjct: 608 EPGQS 612
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 126/439 (28%), Positives = 209/439 (47%), Gaps = 37/439 (8%)
Query: 18 GAKTRTQLTQ-IHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNI---- 72
GA+ +++ + IH + +R + + + + A + YA RVF+ P PN+
Sbjct: 17 GARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWN 76
Query: 73 ---------------------------ILFNSIIKACSLSPPFQQCFHLFSLMRNARAIS 105
+ +N +I+ SLS ++ M + +
Sbjct: 77 NLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSAN 136
Query: 106 PDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKV 165
T ++LK +S+ LG+ +H QV LGF + V ++ +YAN + DA KV
Sbjct: 137 LTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKV 196
Query: 166 FDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEAL 225
F + +R+ +++N ++ G G +E L+LFR M ++ VSW MI LA+ +EA+
Sbjct: 197 FYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAI 255
Query: 226 VLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDF 285
FREM +G + D +VLP C LGA + G+ IH+ F +D + VG++L+D
Sbjct: 256 ECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNF-QDHIYVGSALIDM 314
Query: 286 YCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTF 344
YCKC +VF+ M +NVVSW AM+ G G E V +F DM R G+ P+ T
Sbjct: 315 YCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTL 374
Query: 345 VGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMP 404
++ CA+ ++ G + F A+ L+ + +V L G+CG + ++ L M
Sbjct: 375 GQAISACANVSSLEEGSQ-FHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMN 433
Query: 405 MEPTAALWGALLSACRTHG 423
+ A W A++SA G
Sbjct: 434 VR-DAVSWTAMVSAYAQFG 451
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 238 bits (608), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 134/424 (31%), Positives = 221/424 (52%), Gaps = 6/424 (1%)
Query: 23 TQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKAC 82
+QL QIH ++H L + ++ ISV +S YA+ VFN +P+ +N +I++
Sbjct: 34 SQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSL 93
Query: 83 SLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARH 142
S++ ++ LF LM + D FTFP ++KA +LG +H GF
Sbjct: 94 SVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFND 153
Query: 143 GPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGD 202
+ +++LY C + KVFD+M R ++ W M+ G +L++ +F +M
Sbjct: 154 VFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPM 213
Query: 203 RSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWI 262
R+VVSW MI+ K ++ +EA LFR M +P++ T+V +L +LG+ +G W+
Sbjct: 214 RNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWV 273
Query: 263 HSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGM 322
H YA+ GF+ D +G +L+D Y KCG+ Q VF+ M +++ +WN+MI+ + +G
Sbjct: 274 HDYAHKNGFVLDCF-LGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGC 332
Query: 323 GEVGVGLFEDMVR--GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHY 380
GE + LFE+M V P+ TFVGVL+ CA+ G V G F M + + P EH
Sbjct: 333 GEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHN 392
Query: 381 GCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEP 440
C++ LL + V +A +L+ SM +P + + T G E E ++ +
Sbjct: 393 ACMIQLLEQALEVEKASNLVESMDSDPD---FNSSFGNEYTDGMNETNETPSQHQIMFTK 449
Query: 441 WNSG 444
W++G
Sbjct: 450 WDTG 453
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 238 bits (608), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 154/494 (31%), Positives = 251/494 (50%), Gaps = 52/494 (10%)
Query: 4 GLQQIERRILSLLHGAKTRTQLTQIHAHFLRHGLHHSN---------QILAHFISVCASL 54
G ++I ++ L A + L Q+ HG N L S C S+
Sbjct: 310 GSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSV 369
Query: 55 HRVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSL 114
H+ + VF +++ +N++I A + + L M+ + DY T +L
Sbjct: 370 HK---SFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK-QGFKIDYITVTAL 425
Query: 115 LKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDV 174
L AASNLR+ ++G+ HA + +R G+ F+ M
Sbjct: 426 LSAASNLRNKEIGKQTHAFL----------IRQGIQ---------------FEGMN---- 456
Query: 175 IVWNLMIQGYCKVGELETGLELFRRMG--DRSVVSWNLMISCLAKGKKEEEALVLFREML 232
+ +I Y K G + +LF G +R +WN MIS + E+ ++FR+ML
Sbjct: 457 ---SYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKML 513
Query: 233 EKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNP 292
E+ P+ T+ ++LP C+++G+ D+G+ +H ++ + +L V V ++LVD Y K G
Sbjct: 514 EQNIRPNAVTVASILPACSQIGSVDLGKQLHGFS-IRQYLDQNVFVASALVDMYSKAGAI 572
Query: 293 QAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACC 351
+ +F++ RN V++ MI G +GMGE + LF M G+ P+ TFV VL+ C
Sbjct: 573 KYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSAC 632
Query: 352 AHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPT-AA 410
+++GL+D G ++F+ M + + P EHY C+ D+LGR G V EA + ++ + E A
Sbjct: 633 SYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAE 692
Query: 411 LWGALLSACRTHGDREIAEIAAKELVNVEPWN--SGHHVLLSNIYAEEMRWDEVEKVRVL 468
LWG+LL +C+ HG+ E+AE ++ L + SG+ VLLSN+YAEE +W V+KVR
Sbjct: 693 LWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRG 752
Query: 469 MREGHIKKVPGQSA 482
MRE +KK G+S
Sbjct: 753 MREKGLKKEVGRSG 766
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 114/481 (23%), Positives = 210/481 (43%), Gaps = 82/481 (17%)
Query: 43 ILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNAR 102
+++ IS+ A L + + RVF+ NI ++N++I + + LF ++
Sbjct: 253 VVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSK 312
Query: 103 AISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRV--GVVELYANCERMG 160
I D T+ A S L+ +LG+ H V+ F R P+ + ++ +Y+ C +
Sbjct: 313 EIVSDEVTYLLAASAVSALQQVELGRQFHGFVSK-NF-RELPIVIVNSLMVMYSRCGSVH 370
Query: 161 DAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKK 220
+ VF MRERDV+ WN MI + ++ GL
Sbjct: 371 KSFGVFLSMRERDVVSWNTMISAF-----VQNGL-------------------------- 399
Query: 221 EEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGN 280
++E L+L EM ++GF+ D T+ +L + L ++G+ H++ +G + +
Sbjct: 400 DDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGI--QFEGMNS 457
Query: 281 SLVDFYCKCGNPQAGLSVF--NEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGV 337
L+D Y K G + +F + R+ +WN+MISG NG E +F M+ + +
Sbjct: 458 YLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNI 517
Query: 338 TPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREAL 397
PN T +L C+ G VD G++L +++ L + +VD+ + G ++ A
Sbjct: 518 RPNAVTVASILPACSQIGSVDLGKQL-HGFSIRQYLDQNVFVASALVDMYSKAGAIKYAE 576
Query: 398 DL----------------------------------IRSMPMEPTAALWGALLSACRTHG 423
D+ ++ ++P A + A+LSAC G
Sbjct: 577 DMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSG 636
Query: 424 ----DREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEV-EKVRVLMREGHIKKVP 478
+I E +E+ N++P +S H+ ++++ R +E E V+ L EG+I ++
Sbjct: 637 LIDEGLKIFE-EMREVYNIQP-SSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELW 694
Query: 479 G 479
G
Sbjct: 695 G 695
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 156/376 (41%), Gaps = 47/376 (12%)
Query: 60 ATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISP-DYFTFPSLLKAA 118
A ++F+ P P +L+N+II + + +S M+ + D +T+ S LKA
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 119 SNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGD------AGKVFDEMRER 172
+ ++ + G+++H + V ++ +Y +C D KVFD MR +
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRK 177
Query: 173 DVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREML 232
+V+ WN +I Y K G + EA F M+
Sbjct: 178 NVVAWNTLISWYVKTG-------------------------------RNAEACRQFGIMM 206
Query: 233 EKGFEPDDATLVTVLP---VCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKC 289
+P + V V P + + A+V + D+ +++D+ V +S + Y +
Sbjct: 207 RMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDE-YVKDLFVV-SSAISMYAEL 264
Query: 290 GNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMV--RGVTPNDSTFVGV 347
G+ ++ VF+ RN+ WN MI N + LF + + + + ++ T++
Sbjct: 265 GDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLA 324
Query: 348 LACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEP 407
+ + V+ GR+ ++ F+ LP + +V + RCG V ++ + SM E
Sbjct: 325 ASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMV-MYSRCGSVHKSFGVFLSM-RER 382
Query: 408 TAALWGALLSACRTHG 423
W ++SA +G
Sbjct: 383 DVVSWNTMISAFVQNG 398
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 76/192 (39%), Gaps = 10/192 (5%)
Query: 185 CKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKG-FEPDDA-T 242
C+ G + +LF + + V WN +I EAL+ + M + F DA T
Sbjct: 50 CQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYT 109
Query: 243 LVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGL------ 296
+ L CA G+ +H + + V NSL++ Y C N
Sbjct: 110 YSSTLKACAETKNLKAGKAVHCHL-IRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVR 168
Query: 297 SVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAG 355
VF+ M +NVV+WN +IS G F M+R V P+ +FV V + +
Sbjct: 169 KVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISR 228
Query: 356 LVDRGRELFDSM 367
+ + + M
Sbjct: 229 SIKKANVFYGLM 240
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 238 bits (608), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 140/428 (32%), Positives = 221/428 (51%), Gaps = 36/428 (8%)
Query: 60 ATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAAS 119
A ++F+ P N+ +N+ I ++ F R P+ TF + L A S
Sbjct: 162 ARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDG-HPNSITFCAFLNACS 220
Query: 120 NLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNL 179
+ LG LH V GF V G+++ Y C+ ++R ++I
Sbjct: 221 DWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCK----------QIRSSEII---- 266
Query: 180 MIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPD 239
F MG ++ VSW +++ + ++E+A VL+ + E
Sbjct: 267 -----------------FTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETS 309
Query: 240 DATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVF 299
D + +VL CA + ++G IH++A K + + VG++LVD Y KCG + F
Sbjct: 310 DFMISSVLSACAGMAGLELGRSIHAHAV-KACVERTIFVGSALVDMYGKCGCIEDSEQAF 368
Query: 300 NEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR---GVTPNDSTFVGVLACCAHAGL 356
+EMP +N+V+ N++I G A+ G ++ + LFE+M G TPN TFV +L+ C+ AG
Sbjct: 369 DEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGA 428
Query: 357 VDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALL 416
V+ G ++FDSM + + P EHY C+VD+LGR G V A + I+ MP++PT ++WGAL
Sbjct: 429 VENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQ 488
Query: 417 SACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKK 476
+ACR HG ++ +AA+ L ++P +SG+HVLLSN +A RW E VR ++ IKK
Sbjct: 489 NACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKK 548
Query: 477 VPGQSATT 484
G S T
Sbjct: 549 GAGYSWIT 556
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 114/254 (44%), Gaps = 4/254 (1%)
Query: 178 NLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFE 237
N +I Y K+ E+ + R R+VVSW +IS LA+ ALV F EM +G
Sbjct: 46 NYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVV 105
Query: 238 PDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLS 297
P+D T A L G+ IH+ A G + D+ VG S D YCK
Sbjct: 106 PNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVF-VGCSAFDMYCKTRLRDDARK 164
Query: 298 VFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGL 356
+F+E+P RN+ +WNA IS +G + F + R PN TF L C+
Sbjct: 165 LFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLH 224
Query: 357 VDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALL 416
++ G +L + ++ + ++D G+C +R + + M + A W +L+
Sbjct: 225 LNLGMQL-HGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTK-NAVSWCSLV 282
Query: 417 SACRTHGDREIAEI 430
+A + + E A +
Sbjct: 283 AAYVQNHEDEKASV 296
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 70/148 (47%), Gaps = 5/148 (3%)
Query: 278 VGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-G 336
+ N L++ Y K +P++ V P RNVVSW ++ISG+A NG + F +M R G
Sbjct: 44 LANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREG 103
Query: 337 VTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGC-VVDLLGRCGHVRE 395
V PND TF A L G+++ ++AVK + + GC D+ + +
Sbjct: 104 VVPNDFTFPCAFKAVASLRLPVTGKQI-HALAVKCGRILDV-FVGCSAFDMYCKTRLRDD 161
Query: 396 ALDLIRSMPMEPTAALWGALLSACRTHG 423
A L +P E W A +S T G
Sbjct: 162 ARKLFDEIP-ERNLETWNAFISNSVTDG 188
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 238 bits (607), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 143/447 (31%), Positives = 231/447 (51%), Gaps = 36/447 (8%)
Query: 39 HSNQILAHFISVCASL--HRVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFS 96
+SN +L+ + + S H P + VF H P NI +N II S S + LF
Sbjct: 63 YSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFL 122
Query: 97 LMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANC 156
M + PD FT P +L+A S R+ + G +H LGF+ V +V +Y +
Sbjct: 123 RMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDM 182
Query: 157 ERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLA 216
++ A K+FD+M RD +++ M GY + GE GL
Sbjct: 183 GKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGL---------------------- 220
Query: 217 KGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIV 276
+FREM GF D +V++L C +LGA G+ +H + + +
Sbjct: 221 ---------AMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGL- 270
Query: 277 SVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR- 335
++GN++ D Y KC +VF M R+V+SW+++I G +G + LF++M++
Sbjct: 271 NLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKE 330
Query: 336 GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVRE 395
G+ PN TF+GVL+ CAH GLV++ F M ++ ++P+L+HY V D + R G + E
Sbjct: 331 GIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQ-EYNIVPELKHYASVADCMSRAGLLEE 389
Query: 396 ALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAE 455
A + MP++P A+ GA+LS C+ +G+ E+ E A+EL+ ++P + ++V L+ +Y+
Sbjct: 390 AEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSA 449
Query: 456 EMRWDEVEKVRVLMREGHIKKVPGQSA 482
R+DE E +R M+E I KVPG S+
Sbjct: 450 AGRFDEAESLRQWMKEKQISKVPGCSS 476
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 111/292 (38%), Gaps = 53/292 (18%)
Query: 74 LFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQ 133
LF +KA +LS Q LFSL+ + SP+ K +L L L++
Sbjct: 17 LFAMFLKARALSVTTQNPPDLFSLLHH----SPN-------AKHLRHLHAHLLRTFLYSN 65
Query: 134 VTTLGFARHGPVRVGVVELYANCERMGDAG-KVFDEMRERDVIVWNLMIQGYCKVGELET 192
V + +V Y+ + VF M R++ WN++I + + G
Sbjct: 66 VV---------LSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASK 116
Query: 193 GLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCAR 252
++LF RM S V PDD TL +L C+
Sbjct: 117 SIDLFLRMWRESCV------------------------------RPDDFTLPLILRACSA 146
Query: 253 LGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNA 312
A G+ IH GF + V ++LV Y G +F++MP+R+ V + A
Sbjct: 147 SREAKSGDLIHVLCLKLGFSSSLF-VSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTA 205
Query: 313 MISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVDRGREL 363
M G G +G+ +F +M G + V +L C G + G+ +
Sbjct: 206 MFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSV 257
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 238 bits (607), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 142/410 (34%), Positives = 218/410 (53%), Gaps = 33/410 (8%)
Query: 71 NIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSL 130
++I +N I C + + L S MRN S D LKA S + +LG+ +
Sbjct: 244 SVITWNIISGGCLQTGNYVGALGLISRMRNF-PTSLDPVAMIIGLKACSLIGAIRLGKEI 302
Query: 131 HAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGEL 190
H G A H G+ D +R N +I Y K +L
Sbjct: 303 H------GLAIHSSYD-GI-----------------DNVR-------NTLITMYSKCKDL 331
Query: 191 ETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVC 250
L +FR+ + S+ +WN +IS A+ K EEA L REML GF+P+ TL ++LP+C
Sbjct: 332 RHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLC 391
Query: 251 ARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSW 310
AR+ G+ H Y + +D + NSLVD Y K G A V + M R+ V++
Sbjct: 392 ARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTY 451
Query: 311 NAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAV 369
++I G G G V + LF++M R G+ P+ T V VL+ C+H+ LV G LF M
Sbjct: 452 TSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQC 511
Query: 370 KFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAE 429
++ + P L+H+ C+VDL GR G + +A D+I +MP +P+ A W LL+AC HG+ +I +
Sbjct: 512 EYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGK 571
Query: 430 IAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPG 479
AA++L+ ++P N G++VL++N+YA W ++ +VR +MR+ +KK PG
Sbjct: 572 WAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPG 621
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 160/343 (46%), Gaps = 9/343 (2%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
Q+HAH + G+ + + ++ ++ ++ + A + +S + + +N +I + + +
Sbjct: 64 QVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNE 123
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
F++ + M ++ I PD FT+PS+LKA D G+ +H + + V
Sbjct: 124 LFEEVIAAYKRMV-SKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVC 182
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMG----D 202
++ +Y MG A ++FD M ERD + WN +I Y G ELF +M +
Sbjct: 183 NALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVE 242
Query: 203 RSVVSWNLMI-SCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEW 261
SV++WN++ CL G AL L M D ++ L C+ +GA +G+
Sbjct: 243 VSVITWNIISGGCLQTGNY-VGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKE 301
Query: 262 IHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNG 321
IH A + I +V N+L+ Y KC + + L VF + ++ +WN++ISG A
Sbjct: 302 IHGLAIHSSY-DGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLN 360
Query: 322 MGEVGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVDRGREL 363
E L +M V G PN T +L CA + G+E
Sbjct: 361 KSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEF 403
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 238 bits (606), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 146/458 (31%), Positives = 237/458 (51%), Gaps = 16/458 (3%)
Query: 28 IHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPP 87
IHA L++GL + + + + L + A + F+ N + +NS++ S
Sbjct: 126 IHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGE 185
Query: 88 FQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRV 147
+ +F + A+S + ++ + + D SL + + A +
Sbjct: 186 LDEARRVFDKIPEKDAVS-----WNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIG 240
Query: 148 GVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVS 207
G Y NC M A FD M +++ + W MI GY K+G++++ ELFR M + +
Sbjct: 241 G----YVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLV 296
Query: 208 WNLMISCLAKGKKEEEALVLFREMLEKG--FEPDDATLVTVLPVCARLGAADVGEWIHSY 265
++ MI+C + K ++AL LF +MLE+ +PD+ TL +V+ ++LG G W+ SY
Sbjct: 297 YDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESY 356
Query: 266 ANDKGF-LRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGE 324
+ G + D++S SL+D Y K G+ +F+ + ++ VS++AMI G NGM
Sbjct: 357 ITEHGIKIDDLLST--SLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMAT 414
Query: 325 VGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCV 383
LF M+ + + PN TF G+L+ +H+GLV G + F+SM L P +HYG +
Sbjct: 415 EANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMK-DHNLEPSADHYGIM 473
Query: 384 VDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNS 443
VD+LGR G + EA +LI+SMPM+P A +WGALL A H + E EIA V +E +
Sbjct: 474 VDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPT 533
Query: 444 GHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
G+ L+ IY+ RWD+ VR ++E + K G S
Sbjct: 534 GYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCS 571
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 147/348 (42%), Gaps = 49/348 (14%)
Query: 24 QLTQIHAHFLRHGLHHSNQILAH---FISVCASLHRVPYATRVFNHSPNPNIILFNSIIK 80
Q Q+HA + + +H IL H + S + V Y R+ + + +++
Sbjct: 18 QAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFNGHDSFSWGCLVR 77
Query: 81 ACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFA 140
S F++ ++ M N+ I P S+L+A + + G+ +HAQ G
Sbjct: 78 FLSQHRKFKETVDVYIDMHNS-GIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLC 136
Query: 141 RHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRM 200
V+ G+V LY+ + A K FD++ E++ + WN ++ GY + GEL+ +F ++
Sbjct: 137 GCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKI 196
Query: 201 GDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGE 260
++ VSWNL+IS AK KG + +L + +P+
Sbjct: 197 PEKDAVSWNLIISSYAK----------------KGDMGNACSLFSAMPL------KSPAS 234
Query: 261 WIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYN 320
W N L+ Y C + + F+ MP +N VSW MISG Y
Sbjct: 235 W------------------NILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISG--YT 274
Query: 321 GMGEVGVGLFEDMVRGVTPNDS-TFVGVLACCAHAGLVDRGRELFDSM 367
+G+V E++ R ++ D + ++AC G +LF M
Sbjct: 275 KLGDVQSA--EELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQM 320
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 95/225 (42%), Gaps = 14/225 (6%)
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA 266
SW ++ L++ +K +E + ++ +M G P + +VL C ++ G+ IH+ A
Sbjct: 71 SWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQA 130
Query: 267 NDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVG 326
G L V V LV Y + G + F+++ +N VSWN+++ G +G +
Sbjct: 131 LKNG-LCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEA 189
Query: 327 VGLFEDMVRGVTPNDSTFVGVLACCAHAGLVDRGR--ELFDSMAVKFQLLPKLEHYGCVV 384
+F+ + P L ++A D G LF +M +K + ++
Sbjct: 190 RRVFDKI-----PEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLK-----SPASWNILI 239
Query: 385 DLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAE 429
C ++ A +MP + W ++S GD + AE
Sbjct: 240 GGYVNCREMKLARTYFDAMP-QKNGVSWITMISGYTKLGDVQSAE 283
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 139/460 (30%), Positives = 229/460 (49%), Gaps = 33/460 (7%)
Query: 28 IHAHFLRHGLH---HSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSL 84
+H ++ G + + L H C V Y RVF P N++ + S+I
Sbjct: 129 VHGFVVKTGFEVNMYVSTCLLHMYMCCG---EVNYGLRVFEDIPQWNVVAWGSLISGFVN 185
Query: 85 SPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGP 144
+ F F M+ + + + LL A +D G+ H + LGF +
Sbjct: 186 NNRFSDAIEAFREMQ-SNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQ 244
Query: 145 VRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRS 204
+VG +VI+ +I Y K G+L T LF M +R+
Sbjct: 245 SKVGF-----------------------NVILATSLIDMYAKCGDLRTARYLFDGMPERT 281
Query: 205 VVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHS 264
+VSWN +I+ ++ EEAL +F +ML+ G PD T ++V+ G + +G+ IH+
Sbjct: 282 LVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHA 341
Query: 265 YANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGE 324
Y + GF++D ++ +LV+ Y K G+ ++ F ++ ++ ++W +I G+A +G G
Sbjct: 342 YVSKTGFVKD-AAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGN 400
Query: 325 VGVGLFEDMVR--GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGC 382
+ +F+ M TP+ T++GVL C+H GLV+ G+ F M L P +EHYGC
Sbjct: 401 EALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGC 460
Query: 383 VVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWN 442
+VD+L R G EA L+++MP++P +WGALL+ C H + E+ + + E
Sbjct: 461 MVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELG 520
Query: 443 SGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQSA 482
SG +VLLSNIYA+ RW +V+ +R M+ + KV G S+
Sbjct: 521 SGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSS 560
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 131/507 (25%), Positives = 221/507 (43%), Gaps = 87/507 (17%)
Query: 10 RRILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQI----LAHFISVCASLHRVPYATRVFN 65
+ ILS L ++ +L Q+H ++ + N I L F + C + YA VF
Sbjct: 7 KPILSQLENCRSLVELNQLHGLMIKSSVIR-NVIPLSRLIDFCTTCPETMNLSYARSVFE 65
Query: 66 HSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQ 125
P++ ++NS+I+ S SP + + M + SPDYFTFP +LKA S LRD Q
Sbjct: 66 SIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLR-KGYSPDYFTFPYVLKACSGLRDIQ 124
Query: 126 LGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYC 185
G +H V GF + V ++ +Y C + +VF+++ + +V+ W +I G+
Sbjct: 125 FGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGF- 183
Query: 186 KVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVT 245
+ +A+ FREM G + ++ +V
Sbjct: 184 ------------------------------VNNNRFSDAIEAFREMQSNGVKANETIMVD 213
Query: 246 VLPVCARLGAADVGEWIHSYANDKGF-------LRDIVSVGNSLVDFYCKCGNPQAGLSV 298
+L C R G+W H + GF + V + SL+D Y KCG+ + +
Sbjct: 214 LLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYL 273
Query: 299 FNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLAC-----CA 352
F+ MP R +VSWN++I+G + NG E + +F DM+ G+ P+ TF+ V+ C+
Sbjct: 274 FDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCS 333
Query: 353 HAG---------------------LVDRGRELFDSMAVK--FQLLPKLEHYGCVVDLLGR 389
G LV+ + D+ + K F+ L K + V ++G
Sbjct: 334 QLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGL 393
Query: 390 C--GHVREALDLIRSMPME----PTAALWGALLSACR-----THGDREIAEIAAKELVNV 438
GH EAL + + M + P + +L AC G R AE+ ++L +
Sbjct: 394 ASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEM--RDLHGL 451
Query: 439 EPWNSGHHVLLSNIYAEEMRWDEVEKV 465
EP H+ + +I + R++E E++
Sbjct: 452 EP-TVEHYGCMVDILSRAGRFEEAERL 477
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 150/461 (32%), Positives = 230/461 (49%), Gaps = 39/461 (8%)
Query: 25 LTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSII--KAC 82
L ++H + L+ ++ + F++ A + YA RVF+ + + +N++I A
Sbjct: 414 LKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQ 473
Query: 83 SLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARH 142
S P HL + PD FT SLL A S L+ +LG+ +H
Sbjct: 474 SNDPRLSLDAHL---QMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVH----------- 519
Query: 143 GPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGD 202
G + ERD+ V+ ++ Y GEL T LF M D
Sbjct: 520 --------------------GFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMED 559
Query: 203 RSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWI 262
+S+VSWN +I+ + + AL +FR+M+ G + +++ V C+ L + +G
Sbjct: 560 KSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREA 619
Query: 263 HSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGM 322
H+YA K L D + SL+D Y K G+ VFN + ++ SWNAMI G +G+
Sbjct: 620 HAYAL-KHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGL 678
Query: 323 GEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYG 381
+ + LFE+M R G P+D TF+GVL C H+GL+ G D M F L P L+HY
Sbjct: 679 AKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYA 738
Query: 382 CVVDLLGRCGHVREALDLI-RSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEP 440
CV+D+LGR G + +AL ++ M E +W +LLS+CR H + E+ E A +L +EP
Sbjct: 739 CVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEP 798
Query: 441 WNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
++VLLSN+YA +W++V KVR M E ++K G S
Sbjct: 799 EKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCS 839
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 141/308 (45%), Gaps = 39/308 (12%)
Query: 63 VFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLR 122
VF+ + N+ +N++I + S + + + F M + + PD+FT+P ++KA + +
Sbjct: 142 VFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 201
Query: 123 DFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQ 182
D +G ++H V G V +V Y + DA ++FD M ER+++ WN MI+
Sbjct: 202 DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR 261
Query: 183 GYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEK----GFEP 238
+ G EE+ +L EM+E+ F P
Sbjct: 262 VFSDNG-------------------------------FSEESFLLLGEMMEENGDGAFMP 290
Query: 239 DDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSV 298
D ATLVTVLPVCAR +G+ +H +A +++V + N+L+D Y KCG +
Sbjct: 291 DVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV-LNNALMDMYSKCGCITNAQMI 349
Query: 299 FNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRG---VTPNDSTFVGVLACCAHAG 355
F +NVVSWN M+ G + G + M+ G V ++ T + + C H
Sbjct: 350 FKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHES 409
Query: 356 LVDRGREL 363
+ +EL
Sbjct: 410 FLPSLKEL 417
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 135/318 (42%), Gaps = 41/318 (12%)
Query: 114 LLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVG-VVELYANCERMGDAGKVFDEMRER 172
LL+A+ +D ++G+ +H V+ R+ V ++ +YA C D+ VFD +R +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 173 DVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREML 232
++ WN +IS ++ + +E L F EM+
Sbjct: 150 NLF-------------------------------QWNAVISSYSRNELYDEVLETFIEMI 178
Query: 233 E-KGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGN 291
PD T V+ CA + +G +H G + D+ VGN+LV FY G
Sbjct: 179 STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVF-VGNALVSFYGTHGF 237
Query: 292 PQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-----GVTPNDSTFVG 346
L +F+ MP RN+VSWN+MI + NG E L +M+ P+ +T V
Sbjct: 238 VTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVT 297
Query: 347 VLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPME 406
VL CA + G+ + AVK +L +L ++D+ +CG + A +I M
Sbjct: 298 VLPVCAREREIGLGKGV-HGWAVKLRLDKELVLNNALMDMYSKCGCITNA-QMIFKMNNN 355
Query: 407 PTAALWGALLSACRTHGD 424
W ++ GD
Sbjct: 356 KNVVSWNTMVGGFSAEGD 373
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/400 (21%), Positives = 169/400 (42%), Gaps = 36/400 (9%)
Query: 28 IHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPP 87
+H ++ GL + +S + V A ++F+ P N++ +NS+I+ S +
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268
Query: 88 FQQCFHLFSLMRNAR---AISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGP 144
++ F L M A PD T ++L + R+ LG+ +H L +
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV 328
Query: 145 VRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRS 204
+ ++++Y+ C + +A +F ++V+ WN M+ G+ G+ ++ R+M
Sbjct: 329 LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQM---- 384
Query: 205 VVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHS 264
LA G+ + D+ T++ +PVC + +H
Sbjct: 385 ----------LAGGED---------------VKADEVTILNAVPVCFHESFLPSLKELHC 419
Query: 265 YANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGE 324
Y+ + F+ + + V N+ V Y KCG+ VF+ + + V SWNA+I G A +
Sbjct: 420 YSLKQEFVYNEL-VANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPR 478
Query: 325 VGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCV 383
+ + M + G+ P+ T +L+ C+ + G+E+ ++ L L Y V
Sbjct: 479 LSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEV-HGFIIRNWLERDLFVYLSV 537
Query: 384 VDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHG 423
+ L CG + L +M + + W +++ +G
Sbjct: 538 LSLYIHCGELCTVQALFDAME-DKSLVSWNTVITGYLQNG 576
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 102/249 (40%), Gaps = 31/249 (12%)
Query: 181 IQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDD 240
I +C+ G+L+ R+V + + + +A +L RE
Sbjct: 50 ISNFCETGDLDKSF--------RTVQEF------VGDDESSSDAFLLVRE---------- 85
Query: 241 ATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFN 300
L +L + ++G IH + LR+ + ++ Y CG+P VF+
Sbjct: 86 -ALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFD 144
Query: 301 EMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR--GVTPNDSTFVGVLACCAHAGLVD 358
+ +N+ WNA+IS + N + + + F +M+ + P+ T+ V+ C AG+ D
Sbjct: 145 ALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKAC--AGMSD 202
Query: 359 RGREL-FDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLS 417
G L + VK L+ + +V G G V +AL L MP E W +++
Sbjct: 203 VGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMP-ERNLVSWNSMIR 261
Query: 418 ACRTHGDRE 426
+G E
Sbjct: 262 VFSDNGFSE 270
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 149/487 (30%), Positives = 237/487 (48%), Gaps = 47/487 (9%)
Query: 4 GLQQIERRILSLLHGAKTRTQ----LTQIHAHFLRHGLHHSNQILAHFISVC----ASLH 55
GL+ + + S+L A + + Q+H H ++ N + F+S S +
Sbjct: 411 GLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIK-----INNVSDSFVSTALIDAYSRN 465
Query: 56 RVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLL 115
R + N +++ +N+++ + S + LF+LM S D FT ++
Sbjct: 466 RCMKEAEILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDD-FTLATVF 524
Query: 116 KAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVI 175
K L G+ +HA G+ V G++++Y C M A FD + D +
Sbjct: 525 KTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDV 584
Query: 176 VWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKG 235
W MI G C+ G+ EE A +F +M G
Sbjct: 585 AWTTMISG------------------------------CIENGE-EERAFHVFSQMRLMG 613
Query: 236 FEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAG 295
PD+ T+ T+ + L A + G IH+ A D VG SLVD Y KCG+
Sbjct: 614 VLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPF-VGTSLVDMYAKCGSIDDA 672
Query: 296 LSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHA 354
+F + M N+ +WNAM+ G+A +G G+ + LF+ M G+ P+ TF+GVL+ C+H+
Sbjct: 673 YCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHS 732
Query: 355 GLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGA 414
GLV + SM + + P++EHY C+ D LGR G V++A +LI SM ME +A+++
Sbjct: 733 GLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRT 792
Query: 415 LLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHI 474
LL+ACR GD E + A +L+ +EP +S +VLLSN+YA +WDE++ R +M+ +
Sbjct: 793 LLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKV 852
Query: 475 KKVPGQS 481
KK PG S
Sbjct: 853 KKDPGFS 859
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 178/401 (44%), Gaps = 40/401 (9%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
Q+H L+ GL + I++ L + +A VF++ ++I +NS+I + +
Sbjct: 336 QVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNG 395
Query: 87 PFQQCFHLF-SLMRNARAISPDYFTFPSLLKAASNLRD-FQLGQSLHAQVTTLGFARHGP 144
+ LF L+R + PD +T S+LKAAS+L + L + +H +
Sbjct: 396 LEVEAVCLFMQLLRC--GLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSF 453
Query: 145 VRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRS 204
V +++ Y+ M +A +F E D++ WN M+ GY
Sbjct: 454 VSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGY-------------------- 492
Query: 205 VVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHS 264
+ + L LF M ++G DD TL TV C L A + G+ +H+
Sbjct: 493 -----------TQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHA 541
Query: 265 YANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGE 324
YA G+ D+ V + ++D Y KCG+ A F+ +P+ + V+W MISG NG E
Sbjct: 542 YAIKSGYDLDLW-VSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEE 600
Query: 325 VGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCV 383
+F M + GV P++ T + + +++GR++ + A+K +
Sbjct: 601 RAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQI-HANALKLNCTNDPFVGTSL 659
Query: 384 VDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGD 424
VD+ +CG + +A L + + M A W A+L HG+
Sbjct: 660 VDMYAKCGSIDDAYCLFKRIEMMNITA-WNAMLVGLAQHGE 699
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 162/364 (44%), Gaps = 46/364 (12%)
Query: 29 HAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPP- 87
HA L + ++ + IS+ + + YA RVF+ P+ +++ +NSI+ A + S
Sbjct: 62 HARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSEC 121
Query: 88 ----FQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHG 143
QQ F LF ++R + T +LK + +S H +G
Sbjct: 122 VVENIQQAFLLFRILRQ-DVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDE 180
Query: 144 PVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLEL------- 196
V +V +Y ++ + +F+EM RDV++WNLM++ Y ++G E ++L
Sbjct: 181 FVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSS 240
Query: 197 ------------FRRMGDRS-------------------VVSWNLMISCLAKGKKEEEAL 225
R GD S ++ N +S + L
Sbjct: 241 GLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALL 300
Query: 226 VLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDF 285
F +M+E E D T + +L ++ + +G+ +H A G L +++V NSL++
Sbjct: 301 KCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLG-LDLMLTVSNSLINM 359
Query: 286 YCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTF 344
YCK +VF+ M R+++SWN++I+G+A NG+ V LF ++R G+ P+ T
Sbjct: 360 YCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTM 419
Query: 345 VGVL 348
VL
Sbjct: 420 TSVL 423
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 142/327 (43%), Gaps = 37/327 (11%)
Query: 104 ISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAG 163
+ D TF +L A + LGQ +H LG
Sbjct: 311 VECDQVTFILMLATAVKVDSLALGQQVHCMALKLGL------------------------ 346
Query: 164 KVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEE 223
D M + V N +I YCK+ + +F M +R ++SWN +I+ +A+ E E
Sbjct: 347 ---DLM----LTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVE 399
Query: 224 ALVLFREMLEKGFEPDDATLVTVLPVCARLGAA-DVGEWIHSYANDKGFLRDIVSVGNSL 282
A+ LF ++L G +PD T+ +VL + L + + +H +A + D V +L
Sbjct: 400 AVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSF-VSTAL 458
Query: 283 VDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPND 341
+D Y + + +F E ++V+WNAM++G + G + LF M +G +D
Sbjct: 459 IDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDD 517
Query: 342 STFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIR 401
T V C +++G+++ + A+K L ++D+ +CG + A
Sbjct: 518 FTLATVFKTCGFLFAINQGKQV-HAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFD 576
Query: 402 SMPMEPTAALWGALLSACRTHGDREIA 428
S+P+ P W ++S C +G+ E A
Sbjct: 577 SIPV-PDDVAWTTMISGCIENGEEERA 602
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 150/478 (31%), Positives = 233/478 (48%), Gaps = 48/478 (10%)
Query: 14 SLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCA--SLHRVPYATRVFNHSPNPN 71
+++ + +Q+ Q+ +HFL G S+ + + + CA + +A ++F + P P
Sbjct: 8 TMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPL 67
Query: 72 IILFNSIIKACSLSPPFQQCFHLFSLMRNARAISP-----DYFTFPSLLKAASNLRDFQL 126
+N+II+ + S F + M + S D T LKA +
Sbjct: 68 TNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSA 127
Query: 127 GQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCK 186
LH Q+ G + D ++ ++ Y K
Sbjct: 128 MDQLHCQINRRGLSA-------------------------------DSLLCTTLLDAYSK 156
Query: 187 VGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTV 246
G+L + +LF M R V SWN +I+ L G + EA+ L++ M +G + T+V
Sbjct: 157 NGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAA 216
Query: 247 LPVCARLGAADVGEWI-HSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMP-M 304
L C+ LG GE I H Y+ND V V N+ +D Y KCG VF +
Sbjct: 217 LGACSHLGDVKEGENIFHGYSNDN------VIVSNAAIDMYSKCGFVDKAYQVFEQFTGK 270
Query: 305 RNVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGREL 363
++VV+WN MI+G A +G + +F+ + G+ P+D +++ L C HAGLV+ G +
Sbjct: 271 KSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSV 330
Query: 364 FDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHG 423
F++MA K + ++HYGCVVDLL R G +REA D+I SM M P LW +LL A +
Sbjct: 331 FNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYS 389
Query: 424 DREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
D E+AEIA++E+ + N G VLLSN+YA + RW +V +VR M +KK+PG S
Sbjct: 390 DVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLS 447
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 140/462 (30%), Positives = 242/462 (52%), Gaps = 17/462 (3%)
Query: 28 IHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPP 87
+H+ ++ G+ + + IS+ V A +VF+ P N+ +N++I +
Sbjct: 68 LHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGD 127
Query: 88 FQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVT-TLGFARHGPVR 146
LF + R + T+ ++K + + + L ++ L + V
Sbjct: 128 AVLASGLFEEISVCR----NTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVM 183
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
+GV Y N +M DA K F+++ E++ VW+LM+ GY ++G++ +F R+ R +V
Sbjct: 184 LGV---YVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLV 240
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA 266
WN +I+ A+ ++A+ F M +G+EPD T+ ++L CA+ G DVG +HS
Sbjct: 241 IWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLI 300
Query: 267 NDKGF-LRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEV 325
N +G L VS N+L+D Y KCG+ + SVF + +R+V N+MIS +A +G G+
Sbjct: 301 NHRGIELNQFVS--NALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKE 358
Query: 326 GVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVV 384
+ +F M + P++ TF+ VL C H G + G ++F M + + P ++H+GC++
Sbjct: 359 ALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQ-DVKPNVKHFGCLI 417
Query: 385 DLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVN----VEP 440
LLGR G ++EA L++ M ++P + GALL AC+ H D E+AE K +
Sbjct: 418 HLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNS 477
Query: 441 WNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQSA 482
++ H +SN+YA RW E +RV M + ++K PG S+
Sbjct: 478 YSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLSS 519
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 151/325 (46%), Gaps = 25/325 (7%)
Query: 126 LGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYC 185
LG+ LH++ G V ++ +Y C + A KVFDEM ER+V WN MI GY
Sbjct: 64 LGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYM 123
Query: 186 KVGELETGLELFRRMGD-RSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLV 244
G+ LF + R+ V+W MI K + E+A LF M FE +
Sbjct: 124 SNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERM---PFELKNVKAW 180
Query: 245 TVLPVCARLGAADVGEWIHS--YANDKGFLRDI----VSVGNSLVDFYCKCGNPQAGLSV 298
+V+ +G ++++ + + F DI V + ++ Y + G+ ++
Sbjct: 181 SVM----------LGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAI 230
Query: 299 FNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLV 357
F + R++V WN +I+G A NG + + F +M G P+ T +L+ CA +G +
Sbjct: 231 FYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRL 290
Query: 358 DRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLS 417
D GRE+ + + L + ++D+ +CG + A + S+ + A +++S
Sbjct: 291 DVGREVHSLINHRGIELNQFVS-NALIDMYAKCGDLENATSVFESISVRSVACC-NSMIS 348
Query: 418 ACRTHGD-REIAEI-AAKELVNVEP 440
HG +E E+ + E ++++P
Sbjct: 349 CLAIHGKGKEALEMFSTMESLDLKP 373
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 231 bits (589), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 134/379 (35%), Positives = 202/379 (53%), Gaps = 35/379 (9%)
Query: 105 SPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGK 164
S D + S +++ RDF+ G H GF + +V LY + + +A K
Sbjct: 117 SFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYK 176
Query: 165 VFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEA 224
VF+EM ER+V+ W MI G+ + ++ L+L+ +M R S
Sbjct: 177 VFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKM--RKSTS----------------- 217
Query: 225 LVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVD 284
+P+D T +L C GA G +H G L+ + + NSL+
Sbjct: 218 ------------DPNDYTFTALLSACTGSGALGQGRSVHCQTLHMG-LKSYLHISNSLIS 264
Query: 285 FYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMV--RGVTPNDS 342
YCKCG+ + +F++ ++VVSWN+MI+G A +G+ + LFE M+ G P+
Sbjct: 265 MYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAI 324
Query: 343 TFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRS 402
T++GVL+ C HAGLV GR+ F+ MA + L P+L HY C+VDLLGR G ++EAL+LI +
Sbjct: 325 TYLGVLSSCRHAGLVKEGRKFFNLMA-EHGLKPELNHYSCLVDLLGRFGLLQEALELIEN 383
Query: 403 MPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEV 462
MPM+P + +WG+LL +CR HGD AA+E + +EP + HV L+N+YA W E
Sbjct: 384 MPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEA 443
Query: 463 EKVRVLMREGHIKKVPGQS 481
VR LM++ +K PG S
Sbjct: 444 ATVRKLMKDKGLKTNPGCS 462
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 111/259 (42%), Gaps = 33/259 (12%)
Query: 57 VPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLK 116
V A +VF P N++ + ++I + C L+S MR + + P+ +TF +LL
Sbjct: 171 VENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTS-DPNDYTFTALLS 229
Query: 117 AASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIV 176
A + G+S+H Q +G + + ++ +Y C + DA ++FD+ +DV+
Sbjct: 230 ACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVS 289
Query: 177 WNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGF 236
WN MI GY + G +ELF M M + G
Sbjct: 290 WNSMIAGYAQHGLAMQAIELFELM------------------------------MPKSGT 319
Query: 237 EPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGL 296
+PD T + VL C G G + + G L+ ++ + LVD + G Q L
Sbjct: 320 KPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHG-LKPELNHYSCLVDLLGRFGLLQEAL 378
Query: 297 SVFNEMPMR-NVVSWNAMI 314
+ MPM+ N V W +++
Sbjct: 379 ELIENMPMKPNSVIWGSLL 397
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 231 bits (589), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 128/335 (38%), Positives = 188/335 (56%), Gaps = 4/335 (1%)
Query: 149 VVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSW 208
+++ Y + RM DA +F EM RD WN+M+ GY VG +E F + ++ VSW
Sbjct: 318 MIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSW 377
Query: 209 NLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYAND 268
N +I+ K K +EA+ LF M +G +PD TL ++L L +G +H
Sbjct: 378 NSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVV- 436
Query: 269 KGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPM-RNVVSWNAMISGMAYNGMGEVGV 327
K + D V V N+L+ Y +CG +F+EM + R V++WNAMI G A++G +
Sbjct: 437 KTVIPD-VPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEAL 495
Query: 328 GLFEDM-VRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDL 386
LF M G+ P+ TFV VL CAHAGLVD + F SM +++ P++EHY +V++
Sbjct: 496 NLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNV 555
Query: 387 LGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGHH 446
G EA+ +I SMP EP +WGALL ACR + + +A +AA+ + +EP +S +
Sbjct: 556 TSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPY 615
Query: 447 VLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
VLL N+YA+ WDE +VR+ M IKK G S
Sbjct: 616 VLLYNMYADMGLWDEASQVRMNMESKRIKKERGSS 650
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 134/327 (40%), Gaps = 39/327 (11%)
Query: 48 ISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPD 107
+S AS+ V A F +P + + +NSII A + +++ LF M N PD
Sbjct: 350 VSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRM-NIEGEKPD 408
Query: 108 YFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFD 167
T SLL A++ L + +LG +H Q+ PV ++ +Y+ C + ++ ++FD
Sbjct: 409 PHTLTSLLSASTGLVNLRLGMQMH-QIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFD 467
Query: 168 EMR-ERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALV 226
EM+ +R+VI WN MI GY G EAL
Sbjct: 468 EMKLKREVITWNAMIGGYAFHG-------------------------------NASEALN 496
Query: 227 LFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFY 286
LF M G P T V+VL CA G D + + + +SLV+
Sbjct: 497 LFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVT 556
Query: 287 CKCGNPQAGLSVFNEMPMR-NVVSWNAMISG-MAYNGMGEVGVGLFEDMVRGVTPNDST- 343
G + + + MP + W A++ YN +G V E M R + P ST
Sbjct: 557 SGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAA-EAMSR-LEPESSTP 614
Query: 344 FVGVLACCAHAGLVDRGRELFDSMAVK 370
+V + A GL D ++ +M K
Sbjct: 615 YVLLYNMYADMGLWDEASQVRMNMESK 641
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 134/308 (43%), Gaps = 62/308 (20%)
Query: 161 DAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKK 220
+A K+FDEM RD WN MI GY K + L LF +M +R+ VSW+ MI+ + +
Sbjct: 123 EARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGE 182
Query: 221 EEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAAD--VGEW----------IHSY--- 265
+ A+VLFR+M K P A LV L RL A +G++ +++Y
Sbjct: 183 VDSAVVLFRKMPVKDSSPLCA-LVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTL 241
Query: 266 ------------------------ANDKG------FLRDIVSVGNSLVDFYCKCGNPQAG 295
+D G F +++VS NS++ Y K G+ +
Sbjct: 242 IVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVS-WNSMIKAYLKVGDVVSA 300
Query: 296 LSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRGVTPNDS--TFVGVLACCAH 353
+F++M R+ +SWN MI G + E LF +M PN ++ +++ A
Sbjct: 301 RLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM-----PNRDAHSWNMMVSGYAS 355
Query: 354 AGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPME---PTAA 410
G V+ R F+ K + + ++ + +EA+DL M +E P
Sbjct: 356 VGNVELARHYFEKTPEKHTV-----SWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPH 410
Query: 411 LWGALLSA 418
+LLSA
Sbjct: 411 TLTSLLSA 418
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 84/207 (40%), Gaps = 53/207 (25%)
Query: 159 MGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKG 218
+ +A +F+++ R+ + WN MI GY K E+ +LF M R VV+WN MIS
Sbjct: 56 IAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSC 115
Query: 219 ---KKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDI 275
+ EEA LF EM + D W
Sbjct: 116 GGIRFLEEARKLFDEMPSR----------------------DSFSW-------------- 139
Query: 276 VSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM-V 334
N+++ Y K L +F +MP RN VSW+AMI+G NG + V LF M V
Sbjct: 140 ----NTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPV 195
Query: 335 RGVTPNDSTFVGVLACCAHAGLVDRGR 361
+ +P C AGL+ R
Sbjct: 196 KDSSP---------LCALVAGLIKNER 213
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 132/424 (31%), Positives = 224/424 (52%), Gaps = 34/424 (8%)
Query: 60 ATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFS-LMRNARAISPDYFTFPSLLKAA 118
A ++F+ P +++ +NS+I S +CF + S +M + P+ TF S++ A
Sbjct: 85 AEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISAC 144
Query: 119 SNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWN 178
+ G+ +H V ++ GV+E +V V N
Sbjct: 145 VYGGSKEEGRCIHGLV----------MKFGVLE---------------------EVKVVN 173
Query: 179 LMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEP 238
I Y K G+L + +LF + +++VSWN MI + E+ L F G EP
Sbjct: 174 AFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEP 233
Query: 239 DDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSV 298
D AT + VL C +G + + IH GF + + +L+D Y K G + +V
Sbjct: 234 DQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGN-KCITTALLDLYSKLGRLEDSSTV 292
Query: 299 FNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLV 357
F+E+ + ++W AM++ A +G G + FE MV G++P+ TF +L C+H+GLV
Sbjct: 293 FHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLV 352
Query: 358 DRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLS 417
+ G+ F++M+ ++++ P+L+HY C+VDLLGR G +++A LI+ MPMEP++ +WGALL
Sbjct: 353 EEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLG 412
Query: 418 ACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKV 477
ACR + D ++ AA+ L +EP + ++V+LSNIY+ W + ++R LM++ + +
Sbjct: 413 ACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRA 472
Query: 478 PGQS 481
G S
Sbjct: 473 SGCS 476
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 143/319 (44%), Gaps = 45/319 (14%)
Query: 112 PSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRE 171
SL+ A + +L + LH +V RHG + +V Y A K+FDEM E
Sbjct: 35 SSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPE 94
Query: 172 RDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREM 231
RD++ WN +I GY G L E+ RM MIS
Sbjct: 95 RDLVSWNSLISGYSGRGYLGKCFEVLSRM----------MIS------------------ 126
Query: 232 LEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGN 291
E GF P++ T ++++ C G+ + G IH G L + V V N+ +++Y K G+
Sbjct: 127 -EVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEE-VKVVNAFINWYGKTGD 184
Query: 292 PQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR--GVTPNDSTFVGVLA 349
+ +F ++ ++N+VSWN MI NG+ E G+ F +M R G P+ +TF+ VL
Sbjct: 185 LTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYF-NMSRRVGHEPDQATFLAVLR 243
Query: 350 CCAHAGLVD-----RGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMP 404
C G+V G +F + + L +DL + G + ++ + +
Sbjct: 244 SCEDMGVVRLAQGIHGLIMFGGFSGNKCITTAL------LDLYSKLGRLEDSSTVFHEIT 297
Query: 405 MEPTAALWGALLSACRTHG 423
P + W A+L+A THG
Sbjct: 298 -SPDSMAWTAMLAAYATHG 315
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 148/479 (30%), Positives = 240/479 (50%), Gaps = 12/479 (2%)
Query: 12 ILSLLHGAKTRTQLT---QIHAHFLRHG-LHHSNQILAHFISVCASLHRVPYATRVFNHS 67
I+S+L T L +IH++ LRH L + IS A A F+
Sbjct: 333 IISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLM 392
Query: 68 PNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLG 127
+II +N+I+ A + SP Q F AI+ D T SLLK N++
Sbjct: 393 STKDIISWNAILDAFADSPK-QFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKV 451
Query: 128 QSLHAQVTTLGF---ARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIV-WNLMIQG 183
+ +H G + +++ YA C + A K+F + ER +V +N ++ G
Sbjct: 452 KEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSG 511
Query: 184 YCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATL 243
Y G + LF M + +W+LM+ A+ EA+ +FRE+ +G P+ T+
Sbjct: 512 YVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTI 571
Query: 244 VTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMP 303
+ +LPVCA+L + + H Y +G L DI G +L+D Y KCG+ + SVF
Sbjct: 572 MNLLPVCAQLASLHLVRQCHGYII-RGGLGDIRLKG-TLLDVYAKCGSLKHAYSVFQSDA 629
Query: 304 MRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRGVTPNDSTFVG-VLACCAHAGLVDRGRE 362
R++V + AM++G A +G G+ + ++ M D F+ +L C HAGL+ G +
Sbjct: 630 RRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQ 689
Query: 363 LFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTH 422
++DS+ + P +E Y C VDL+ R G + +A + MP+EP A +WG LL AC T+
Sbjct: 690 IYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTY 749
Query: 423 GDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
++ A L+ E ++G+HVL+SN+YA + +W+ V ++R LM++ +KK G S
Sbjct: 750 NRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCS 808
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 199/443 (44%), Gaps = 52/443 (11%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRV-PYATRVFNHSPNPNIILFNSIIKACSLS 85
+H++ ++ GL + +S+ A + P A F+ + +++ +N+II S +
Sbjct: 143 SMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSEN 202
Query: 86 PPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRD---FQLGQSLHAQVTTLGFARH 142
F F LM P+Y T ++L +++ + G+ +H+ V +
Sbjct: 203 NMMADAFRSFCLMLK-EPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWL-- 259
Query: 143 GPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGD 202
+ V V N ++ Y +VG +E LF RMG
Sbjct: 260 ----------------------------QTHVFVCNSLVSFYLRVGRIEEAASLFTRMGS 291
Query: 203 RSVVSWNLMISCLAKGKKEEEALVLFREMLEKG-FEPDDATLVTVLPVCARLGAADVGEW 261
+ +VSWN++I+ A + +A LF ++ KG PD T++++LPVCA+L G+
Sbjct: 292 KDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKE 351
Query: 262 IHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYN- 320
IHSY +L + SVGN+L+ FY + G+ A F+ M ++++SWNA++ A +
Sbjct: 352 IHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSP 411
Query: 321 GMGEVGVGLFEDMVRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLL-----P 375
+ L + +T + T + +L C + + + +E+ +VK LL P
Sbjct: 412 KQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEV-HGYSVKAGLLHDEEEP 470
Query: 376 KLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKEL 435
KL + ++D +CG+V A + + T + +LLS G + A++ E+
Sbjct: 471 KLGN--ALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEM 528
Query: 436 --VNVEPWNSGHHVLLSNIYAEE 456
++ W+ L+ IYAE
Sbjct: 529 STTDLTTWS-----LMVRIYAES 546
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 176/424 (41%), Gaps = 42/424 (9%)
Query: 4 GLQQIERRILSLLHGAKTRTQLTQ---IHAHFLRHGLHHSNQILAHFISVCASLHRVPYA 60
G R L ++ + + LT +H + G +++ +++ A R+
Sbjct: 16 GFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDC 75
Query: 61 TRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASN 120
++F + + +++N ++ S+S ++ F M A P TF +L
Sbjct: 76 QKMFRQMDSLDPVVWNIVLTGLSVSCG-RETMRFFKAMHFADEPKPSSVTFAIVLPLCVR 134
Query: 121 LRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLM 180
L D G+S+H+ + G E+D +V N +
Sbjct: 135 LGDSYNGKSMHSYIIKAGL-------------------------------EKDTLVGNAL 163
Query: 181 IQGYCKVGEL-ETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPD 239
+ Y K G + F + D+ VVSWN +I+ ++ +A F ML++ EP+
Sbjct: 164 VSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPN 223
Query: 240 DATLVTVLPVCARLG---AADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGL 296
AT+ VLPVCA + A G IHSY + +L+ V V NSLV FY + G +
Sbjct: 224 YATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAA 283
Query: 297 SVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR--GVTPNDSTFVGVLACCAHA 354
S+F M +++VSWN +I+G A N LF ++V V+P+ T + +L CA
Sbjct: 284 SLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQL 343
Query: 355 GLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGA 414
+ G+E+ + LL ++ R G A M + + W A
Sbjct: 344 TDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIIS-WNA 402
Query: 415 LLSA 418
+L A
Sbjct: 403 ILDA 406
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 140/324 (43%), Gaps = 44/324 (13%)
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
P +Q F L+ D+ F ++KA +++ D G++LH V LG V
Sbjct: 3 PLRQFVQNFRLLS---GFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVS 59
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
V+ +YA C RM D K+F +M D +VWN+++ G
Sbjct: 60 KSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTG----------------------- 96
Query: 207 SWNLMISCLAKGKKEEEALVLFREM-LEKGFEPDDATLVTVLPVCARLGAADVGEWIHSY 265
L +SC E + F+ M +P T VLP+C RLG + G+ +HSY
Sbjct: 97 ---LSVSC------GRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSY 147
Query: 266 ANDKGFLRDIVSVGNSLVDFYCKCG--NPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMG 323
G +D + VGN+LV Y K G P A + F+ + ++VVSWNA+I+G + N M
Sbjct: 148 IIKAGLEKDTL-VGNALVSMYAKFGFIFPDA-YTAFDGIADKDVVSWNAIIAGFSENNMM 205
Query: 324 EVGVGLFEDMVRGVT-PNDSTFVGVLACCAHAG---LVDRGRELFDSMAVKFQLLPKLEH 379
F M++ T PN +T VL CA GR++ + + L +
Sbjct: 206 ADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFV 265
Query: 380 YGCVVDLLGRCGHVREALDLIRSM 403
+V R G + EA L M
Sbjct: 266 CNSLVSFYLRVGRIEEAASLFTRM 289
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 93/464 (20%), Positives = 188/464 (40%), Gaps = 75/464 (16%)
Query: 27 QIHAHFLRHGLHHSNQILAH-FISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLS 85
QIH++ ++ ++ + + +S + R+ A +F + +++ +N +I + +
Sbjct: 248 QIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASN 307
Query: 86 PPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPV 145
+ + F LF + + +SPD T S+L + L D G+ +H+ + RH +
Sbjct: 308 CEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYIL-----RHSYL 362
Query: 146 RVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSV 205
D V N +I Y + G+ F M + +
Sbjct: 363 L-------------------------EDTSVGNALISFYARFGDTSAAYWAFSLMSTKDI 397
Query: 206 VSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSY 265
+SWN ++ A K+ + L L +L + D T++++L C + + +H Y
Sbjct: 398 ISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGY 457
Query: 266 ANDKGFLRD--IVSVGNSLVDFYCKCGNPQA------GLS-------------------- 297
+ G L D +GN+L+D Y KCGN + GLS
Sbjct: 458 SVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGS 517
Query: 298 ------VFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLAC 350
+F EM ++ +W+ M+ A + +G+F ++ RG+ PN T + +L
Sbjct: 518 HDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPV 577
Query: 351 CAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAA 410
CA + R+ + L + G ++D+ +CG ++ A + +S
Sbjct: 578 CAQLASLHLVRQCHGYIIRGG--LGDIRLKGTLLDVYAKCGSLKHAYSVFQS-DARRDLV 634
Query: 411 LWGALLSACRTHGDREIAEIAAKELV--NVEPWNSGHHVLLSNI 452
++ A+++ HG + A + + N++P HV ++ +
Sbjct: 635 MFTAMVAGYAVHGRGKEALMIYSHMTESNIKP----DHVFITTM 674
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 137/460 (29%), Positives = 230/460 (50%), Gaps = 37/460 (8%)
Query: 24 QLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNH-SPNPNIILFNSIIKAC 82
Q H +RH + + +S+ + A ++F S N +N+++K
Sbjct: 349 QGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGY 408
Query: 83 SLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARH 142
+C LF ++N I D + S++ + S++ LG+SLH V
Sbjct: 409 GKMKCHVKCIELFRKIQNL-GIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLT 467
Query: 143 GPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGD 202
V +++LY +MGD + W + +C+ D
Sbjct: 468 ISVVNSLIDLYG---KMGDL-----------TVAWRM----FCE--------------AD 495
Query: 203 RSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWI 262
+V++WN MI+ ++ E+A+ LF M+ + F+P TLVT+L C G+ + G+ I
Sbjct: 496 TNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMI 555
Query: 263 HSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGM 322
H Y + ++ S+ +L+D Y KCG+ + +F+ ++ V WN MISG +G
Sbjct: 556 HRYITETEHEMNL-SLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGD 614
Query: 323 GEVGVGLFEDMVRG-VTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYG 381
E + LF+ M V P TF+ +L+ C HAGLV++G++LF M ++ + P L+HY
Sbjct: 615 VESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMH-QYDVKPNLKHYS 673
Query: 382 CVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPW 441
C+VDLL R G++ EA + SMP P +WG LLS+C THG+ E+ A+ V +P
Sbjct: 674 CLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQ 733
Query: 442 NSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
N G++++L+N+Y+ +W+E E+ R +MRE + K G S
Sbjct: 734 NDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHS 773
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 154/332 (46%), Gaps = 41/332 (12%)
Query: 24 QLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACS 83
L + +A + GL + + + IS AS + ++RVF+ +I L+NSIIKA
Sbjct: 42 SLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHF 101
Query: 84 LSPPFQQ--CFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLG-FA 140
+ + + CF FS++ + + SPD+FT P ++ A + L F +G +H V G F
Sbjct: 102 SNGDYARSLCF-FFSMLLSGQ--SPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFD 158
Query: 141 RHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRM 200
R+ V V Y+ C + DA VFDEM +RDV+ W +I G+ + GE E GL +M
Sbjct: 159 RNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKM 218
Query: 201 GDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGE 260
+ G + +P+ TL C+ LGA G
Sbjct: 219 H--------------SAGSDVD--------------KPNPRTLECGFQACSNLGALKEGR 250
Query: 261 WIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYN 320
+H +A G L V +S+ FY K GNP F E+ ++ SW ++I+ +A +
Sbjct: 251 CLHGFAVKNG-LASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARS 309
Query: 321 GMGEVGVGLFEDMV-RGVTPNDSTFVGVLACC 351
G E +F +M +G+ P+ GV+ C
Sbjct: 310 GDMEESFDMFWEMQNKGMHPD-----GVVISC 336
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 108/259 (41%), Gaps = 6/259 (2%)
Query: 172 RDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREM 231
++ V + +I Y G+ +F + R + WN +I +L F M
Sbjct: 57 ENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSM 116
Query: 232 LEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGN 291
L G PD T V+ CA L VG ++H G +VG S V FY KCG
Sbjct: 117 LLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGF 176
Query: 292 PQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRGVT----PNDSTFVGV 347
Q VF+EMP R+VV+W A+ISG NG E G+G M + PN T
Sbjct: 177 LQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECG 236
Query: 348 LACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEP 407
C++ G + GR L AVK L + + G+ EA R + E
Sbjct: 237 FQACSNLGALKEGRCL-HGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDED 295
Query: 408 TAALWGALLSACRTHGDRE 426
+ W +++++ GD E
Sbjct: 296 MFS-WTSIIASLARSGDME 313
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 155/401 (38%), Gaps = 46/401 (11%)
Query: 26 TQIHAHFLRHGLHHSNQILA----HFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKA 81
T +H L+HG N + +F S C L A VF+ P+ +++ + +II
Sbjct: 145 TFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQD---ACLVFDEMPDRDVVAWTAIISG 201
Query: 82 CSLSPPFQQCFHLFSLMRNARAI--SPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGF 139
+ + M +A + P+ T +A SNL + G+ LH GF
Sbjct: 202 HVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLH------GF 255
Query: 140 ARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRR 199
A V+ G+ V + M Y K G FR
Sbjct: 256 A----VKNGLAS---------------------SKFVQSSMFSFYSKSGNPSEAYLSFRE 290
Query: 200 MGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVG 259
+GD + SW +I+ LA+ EE+ +F EM KG PD + ++ ++ G
Sbjct: 291 LGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQG 350
Query: 260 EWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR-NVVSWNAMISGMA 318
+ H + F D +V NSL+ YCK +F + N +WN M+ G
Sbjct: 351 KAFHGFVIRHCFSLD-STVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYG 409
Query: 319 YNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKL 377
+ LF + G+ + ++ V++ C+H G V G+ L VK L +
Sbjct: 410 KMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSL-HCYVVKTSLDLTI 468
Query: 378 EHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSA 418
++DL G+ G + A + + W A++++
Sbjct: 469 SVVNSLIDLYGKMGDLTVAWRMF--CEADTNVITWNAMIAS 507
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 156/527 (29%), Positives = 255/527 (48%), Gaps = 78/527 (14%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
++H H +R+G ++ I++ V A +F+ P +II +N++I +
Sbjct: 217 EVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENG 276
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
+ LF MR ++ PD T S++ A L D +LG+ +HA V T GFA V
Sbjct: 277 MCHEGLELFFAMRGL-SVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVC 335
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGY---------------------- 184
+ ++Y N +A K+F M +D++ W MI GY
Sbjct: 336 NSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVK 395
Query: 185 -------------CKVGELETGLEL----------------------------------- 196
+G+L+TG+EL
Sbjct: 396 PDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDI 455
Query: 197 FRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAA 256
F + ++V+SW +I+ L + EAL+ R+M + +P+ TL L CAR+GA
Sbjct: 456 FHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM-KMTLQPNAITLTAALAACARIGAL 514
Query: 257 DVGEWIHSYANDKGF-LRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMIS 315
G+ IH++ G L D + N+L+D Y +CG S FN ++V SWN +++
Sbjct: 515 MCGKEIHAHVLRTGVGLDDFLP--NALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLT 571
Query: 316 GMAYNGMGEVGVGLFEDMVRG-VTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLL 374
G + G G + V LF+ MV+ V P++ TF+ +L C+ + +V +G F M + +
Sbjct: 572 GYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKME-DYGVT 630
Query: 375 PKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKE 434
P L+HY CVVDLLGR G ++EA I+ MP+ P A+WGALL+ACR H ++ E++A+
Sbjct: 631 PNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQH 690
Query: 435 LVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
+ ++ + G+++LL N+YA+ +W EV KVR +M+E + G S
Sbjct: 691 IFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCS 737
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 174/386 (45%), Gaps = 39/386 (10%)
Query: 36 GLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLF 95
G+ N LA F+ + A VF N+ +N ++ + F + L+
Sbjct: 128 GVELGNAFLAMFVR----FGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLY 183
Query: 96 SLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYAN 155
M + PD +TFP +L+ + D G+ +H V G+
Sbjct: 184 HRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGY---------------- 227
Query: 156 CERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCL 215
E D+ V N +I Y K G++++ LF RM R ++SWN MIS
Sbjct: 228 ---------------ELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGY 272
Query: 216 AKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDI 275
+ E L LF M +PD TL +V+ C LG +G IH+Y GF DI
Sbjct: 273 FENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDI 332
Query: 276 VSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR 335
SV NSL Y G+ + +F+ M +++VSW MISG YN + + + + M +
Sbjct: 333 -SVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQ 391
Query: 336 -GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVR 394
V P++ T VL+ CA G +D G EL +A+K +L+ + ++++ +C +
Sbjct: 392 DSVKPDEITVAAVLSACATLGDLDTGVEL-HKLAIKARLISYVIVANNLINMYSKCKCID 450
Query: 395 EALDLIRSMPMEPTAALWGALLSACR 420
+ALD+ ++P + + W ++++ R
Sbjct: 451 KALDIFHNIPRKNVIS-WTSIIAGLR 475
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 118/303 (38%), Gaps = 51/303 (16%)
Query: 215 LAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRD 274
L K EEA+ L M E D+ V ++ +C A + G ++S A +
Sbjct: 69 LCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSS--MSS 126
Query: 275 I-VSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM 333
+ V +GN+ + + + GN VF +M RN+ SWN ++ G A G + + L+ M
Sbjct: 127 LGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRM 186
Query: 334 --VRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCG 391
V GV P+ TF VL C + RG+E+ V++ ++ ++ + +CG
Sbjct: 187 LWVGGVKPDVYTFPCVLRTCGGIPDLARGKEV-HVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 392 HVREALDLIRSMP----------------------------------MEPTAALWGALLS 417
V+ A L MP ++P +++S
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 418 ACRTHGDREIAE------IAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMRE 471
AC GDR + I V++ NS L+ +Y W E EK+ M
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNS-----LTQMYLNAGSWREAEKLFSRMER 360
Query: 472 GHI 474
I
Sbjct: 361 KDI 363
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 100/246 (40%), Gaps = 38/246 (15%)
Query: 181 IQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDD 240
+ G C G+L EEA+ L M E D+
Sbjct: 66 LHGLCANGKL-------------------------------EEAMKLLNSMQELRVAVDE 94
Query: 241 ATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDI-VSVGNSLVDFYCKCGNPQAGLSVF 299
V ++ +C A + G ++S A + + V +GN+ + + + GN VF
Sbjct: 95 DVFVALVRLCEWKRAQEEGSKVYSIALSS--MSSLGVELGNAFLAMFVRFGNLVDAWYVF 152
Query: 300 NEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM--VRGVTPNDSTFVGVLACCAHAGLV 357
+M RN+ SWN ++ G A G + + L+ M V GV P+ TF VL C +
Sbjct: 153 GKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDL 212
Query: 358 DRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLS 417
RG+E+ V++ ++ ++ + +CG V+ A L MP + W A++S
Sbjct: 213 ARGKEV-HVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIIS-WNAMIS 270
Query: 418 ACRTHG 423
+G
Sbjct: 271 GYFENG 276
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 159/493 (32%), Positives = 245/493 (49%), Gaps = 53/493 (10%)
Query: 11 RILSLLH-GAKTRTQLTQIHAHFLRHGLHHSN---QILAHFISVCASLHRVPYA-TRVFN 65
R LSLL +KT Q QIHA + +G H ++ +++ H+ S ++ A VF
Sbjct: 9 RFLSLLQQNSKTLIQAKQIHAQLVINGCHDNSLFGKLIGHYCSKPSTESSSKLAHLLVFP 68
Query: 66 HSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFP-SLLKAASNLRDF 124
+P+ LFN+++K CS + F ++ + ++ F F +++
Sbjct: 69 RFGHPDKFLFNTLLK-CSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSAL 127
Query: 125 QLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGY 184
++G+ +H V LGF LY ++ ++ Y
Sbjct: 128 RVGRIVHGMVKKLGF------------LY------------------ESELIGTTLLHFY 157
Query: 185 CKVGELETGLELFRRMGDRSVVSWNLMIS--CLAKGK---KEEEALVLFREM--LEKGFE 237
K G+L ++F M +R+ V+WN MI C K K +A+VLFR G
Sbjct: 158 AKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVR 217
Query: 238 PDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDI-VSVGNSLVDFYCKCGNPQAGL 296
P D T+V VL ++ G ++G +H Y GF ++ V +G +LVD Y KCG
Sbjct: 218 PTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAF 277
Query: 297 SVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAG 355
SVF M ++NV +W +M +G+A NG G L M G+ PN+ TF +L+ H G
Sbjct: 278 SVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIG 337
Query: 356 LVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGAL 415
LV+ G ELF SM +F + P +EHYGC+VDLLG+ G ++EA I +MP++P A L +L
Sbjct: 338 LVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSL 397
Query: 416 LSACRTHGDREIAEIAAKELVNVEPWN---SGH----HVLLSNIYAEEMRWDEVEKVRVL 468
+AC +G+ + E K L+ +E + SG +V LSN+ A + +W EVEK+R
Sbjct: 398 CNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKE 457
Query: 469 MREGHIKKVPGQS 481
M+E IK PG S
Sbjct: 458 MKERRIKTRPGYS 470
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 146/495 (29%), Positives = 235/495 (47%), Gaps = 41/495 (8%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
Q HA + +G+ N + ++ + + YA VF+ +++ +N II
Sbjct: 295 QSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQG 354
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
+ ++ LMR + + D T +L+ AA+ + +LG+ + F +
Sbjct: 355 LVEDAIYMCQLMRLEK-LKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLA 413
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDR--- 203
V+++YA C + DA KVFD E+D+I+WN ++ Y + G L LF M
Sbjct: 414 STVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVP 473
Query: 204 -SVVSWNLMI-SCLAKGKKEE----------------------------------EALVL 227
+V++WNL+I S L G+ +E EA++
Sbjct: 474 PNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILF 533
Query: 228 FREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYC 287
R+M E G P+ ++ L CA L + +G IH Y +VS+ SLVD Y
Sbjct: 534 LRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYA 593
Query: 288 KCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVG 346
KCG+ VF + NAMIS A G + + L+ + G+ P++ T
Sbjct: 594 KCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITN 653
Query: 347 VLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPME 406
VL+ C HAG +++ E+F + K + P LEHYG +VDLL G +AL LI MP +
Sbjct: 654 VLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFK 713
Query: 407 PTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVR 466
P A + +L+++C E+ + +++L+ EP NSG++V +SN YA E WDEV K+R
Sbjct: 714 PDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMR 773
Query: 467 VLMREGHIKKVPGQS 481
+M+ +KK PG S
Sbjct: 774 EMMKAKGLKKKPGCS 788
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 175/401 (43%), Gaps = 40/401 (9%)
Query: 27 QIHAHFLRHGLHHSNQ--ILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKA-CS 83
QIHA L++G ++ I + A + A +F+ N+ + +II C
Sbjct: 91 QIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCR 150
Query: 84 LSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHG 143
+ ++ N I PD F P++ KA L+ + G+ +H V G
Sbjct: 151 IGLCEGALMGFVEMLENE--IFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCV 208
Query: 144 PVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDR 203
V + ++Y C + DA KVFDE+ +R+ + WN ++ GY + G
Sbjct: 209 FVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNG--------------- 253
Query: 204 SVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIH 263
K EEA+ LF +M ++G EP T+ T L A +G + G+ H
Sbjct: 254 ----------------KNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSH 297
Query: 264 SYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMG 323
+ A G D + +G SL++FYCK G + VF+ M ++VV+WN +ISG G+
Sbjct: 298 AIAIVNGMELDNI-LGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLV 356
Query: 324 EVGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGC 382
E + + + M + + + T +++ A + G+E+ ++ +
Sbjct: 357 EDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEV-QCYCIRHSFESDIVLAST 415
Query: 383 VVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHG 423
V+D+ +CG + +A + S +E LW LL+A G
Sbjct: 416 VMDMYAKCGSIVDAKKVFDS-TVEKDLILWNTLLAAYAESG 455
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 136/419 (32%), Positives = 226/419 (53%), Gaps = 7/419 (1%)
Query: 57 VPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLK 116
+ A +F+ +I+ + ++I C + ++ M + P LL
Sbjct: 255 IEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRC-GMKPSEVMMVDLLS 313
Query: 117 AASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIV 176
A++ G LH + GF + ++ ++ YA + A + F+ + +
Sbjct: 314 ASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIAS 373
Query: 177 WNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKG- 235
N +I G+ K G +E E+F + D+ + SWN MIS A+ + AL LFREM+
Sbjct: 374 RNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQ 433
Query: 236 FEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAG 295
+PD T+V+V + LG+ + G+ H Y N + ++ +++D Y KCG+ +
Sbjct: 434 VKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPND-NLTAAIIDMYAKCGSIETA 492
Query: 296 LSVFNE---MPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACC 351
L++F++ + + WNA+I G A +G ++ + L+ D+ + PN TFVGVL+ C
Sbjct: 493 LNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSAC 552
Query: 352 AHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAAL 411
HAGLV+ G+ F+SM + P ++HYGC+VDLLG+ G + EA ++I+ MP++ +
Sbjct: 553 CHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMI 612
Query: 412 WGALLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMR 470
WG LLSA RTHG+ EIAE+AA EL ++P + G V+LSN+YA+ RW++V VR MR
Sbjct: 613 WGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMR 671
Score = 158 bits (399), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 192/408 (47%), Gaps = 38/408 (9%)
Query: 56 RVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLL 115
R+ A ++F+ P + + + ++IK + + + + LF MRN I + T +++
Sbjct: 122 RLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNL-GIMLNEVTLATVI 180
Query: 116 KAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVI 175
A S+L + L + L V ++ +Y C + DA K+FDEM ER+++
Sbjct: 181 SACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLV 240
Query: 176 VWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKG 235
WN+M+ GY K G +E ELF ++ ++ +VSW MI + + +EALV + EML G
Sbjct: 241 TWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCG 300
Query: 236 FEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGF------------------------ 271
+P + +V +L AR + G +H +GF
Sbjct: 301 MKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLAL 360
Query: 272 ------LRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEV 325
++D ++ N+L+ + K G + VF++ +++ SWNAMISG A + ++
Sbjct: 361 QQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQL 420
Query: 326 GVGLFEDMVRG--VTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHY-GC 382
+ LF +M+ V P+ T V V + + G ++ G+ D + F +P ++
Sbjct: 421 ALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYL--NFSTIPPNDNLTAA 478
Query: 383 VVDLLGRCGHVREALDLIRSMP--MEPTAALWGALLSACRTHGDREIA 428
++D+ +CG + AL++ T + W A++ THG ++A
Sbjct: 479 IIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLA 526
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 140/309 (45%), Gaps = 43/309 (13%)
Query: 113 SLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRER 172
S L + ++ D G+ +H +V G +G + V+ +YA C + DA VF + +
Sbjct: 46 SALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKL 105
Query: 173 DVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREML 232
D +N+M+ GY + L L+LF M +RS VS+ +I A+ + EA+ LFREM
Sbjct: 106 DSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMR 165
Query: 233 EKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNP 292
G ++ TL TV+ C+ LG + S A K L V V +L+ YC C
Sbjct: 166 NLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAI-KLKLEGRVFVSTNLLHMYCLCLCL 224
Query: 293 QAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRGVTPNDSTFVGVLACCA 352
+ +F+EMP RN+V+WN M++G +
Sbjct: 225 KDARKLFDEMPERNLVTWNVMLNGY----------------------------------S 250
Query: 353 HAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSM---PMEPTA 409
AGL+++ ELFD + K + +G ++D R + EAL M M+P+
Sbjct: 251 KAGLIEQAEELFDQITEK-----DIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSE 305
Query: 410 ALWGALLSA 418
+ LLSA
Sbjct: 306 VMMVDLLSA 314
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 229 bits (583), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 144/454 (31%), Positives = 225/454 (49%), Gaps = 39/454 (8%)
Query: 35 HGLHHSNQILAHFI---SVCASLHRVPY---ATRVFNHSPNPNIILFNSIIKACSLSPPF 88
HGL +++ + I S+C R + A RVF+ P+ +N II + +
Sbjct: 293 HGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYA 352
Query: 89 QQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVG 148
+ +FS MR++ I PD + SLL A + G +H+ + GF V
Sbjct: 353 DEAVSVFSQMRSSGFI-PDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNS 411
Query: 149 VVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSW 208
++ +Y C + YC E FR D VSW
Sbjct: 412 LLTMYTFCSDL------------------------YCCFNLFED----FRNNADS--VSW 441
Query: 209 NLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYAND 268
N +++ + ++ E L LF+ ML EPD T+ +L C + + +G +H Y+
Sbjct: 442 NTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLK 501
Query: 269 KGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVG 328
G + + N L+D Y KCG+ +F+ M R+VVSW+ +I G A +G GE +
Sbjct: 502 TGLAPEQF-IKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALI 560
Query: 329 LFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLL 387
LF++M G+ PN TFVGVL C+H GLV+ G +L+ +M + + P EH CVVDLL
Sbjct: 561 LFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLL 620
Query: 388 GRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGHHV 447
R G + EA I M +EP +W LLSAC+T G+ +A+ AA+ ++ ++P+NS HV
Sbjct: 621 ARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHV 680
Query: 448 LLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
LL +++A W+ +R M++ +KK+PGQS
Sbjct: 681 LLCSMHASSGNWENAALLRSSMKKHDVKKIPGQS 714
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 175/418 (41%), Gaps = 39/418 (9%)
Query: 10 RRILSLLHGAKTRTQLTQ---IHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNH 66
R +SL+ + L Q IH H L + + H +S+ + A VF+
Sbjct: 68 RTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDF 127
Query: 67 SPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQL 126
P N++ + S+I S + + L+ M + PD F F S++KA ++ D L
Sbjct: 128 MPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLV-PDQFAFGSIIKACASSSDVGL 186
Query: 127 GQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCK 186
G+ LHAQV L + H + ++ +Y +M DA +VF + +D+I W+ +I G+ +
Sbjct: 187 GKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQ 246
Query: 187 VGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKG-FEPDDATLVT 245
+G E EAL +EML G F P++ +
Sbjct: 247 LG-------------------------------FEFEALSHLKEMLSFGVFHPNEYIFGS 275
Query: 246 VLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR 305
L C+ L D G IH + ++ G SL D Y +CG + VF+++
Sbjct: 276 SLKACSSLLRPDYGSQIHGLCIKSELAGNAIA-GCSLCDMYARCGFLNSARRVFDQIERP 334
Query: 306 NVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVDRGRELF 364
+ SWN +I+G+A NG + V +F M G P+ + +L + +G ++
Sbjct: 335 DTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQI- 393
Query: 365 DSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTH 422
S +K+ L L ++ + C + +L + W +L+AC H
Sbjct: 394 HSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQH 451
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 148/338 (43%), Gaps = 42/338 (12%)
Query: 23 TQLTQIHAHFLRHG----LHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSI 78
+Q QIH++ ++ G L N +L + + C+ L+ F + N + + +N+I
Sbjct: 388 SQGMQIHSYIIKWGFLADLTVCNSLLTMY-TFCSDLYCCFNLFEDFRN--NADSVSWNTI 444
Query: 79 IKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLG 138
+ AC + LF LM + PD+ T +LL+ + +LG +H G
Sbjct: 445 LTACLQHEQPVEMLRLFKLMLVSEC-EPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTG 503
Query: 139 FARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFR 198
A ++ G++++YA C +G A ++FD M RDV+ W+ +I GY + G
Sbjct: 504 LAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSG---------- 553
Query: 199 RMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADV 258
G EEAL+LF+EM G EP+ T V VL C+ +G +
Sbjct: 554 -FG--------------------EEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEE 592
Query: 259 GEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR-NVVSWNAMISGM 317
G +++ + + + +VD + G +EM + +VV W ++S
Sbjct: 593 GLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSAC 652
Query: 318 AYNGMGEVGVGLFEDMVRGVTPNDSTFVGVLACCAHAG 355
G + E++++ + P +ST VL C HA
Sbjct: 653 KTQGNVHLAQKAAENILK-IDPFNST-AHVLLCSMHAS 688
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 149/352 (42%), Gaps = 36/352 (10%)
Query: 74 LFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQ 133
L N I + S +++ F + + T+ SL+ A S+ R G+ +H
Sbjct: 33 LMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDH 92
Query: 134 VTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETG 193
+ L +NC+ D I+ N ++ Y K G L
Sbjct: 93 I-----------------LNSNCKY--------------DTILNNHILSMYGKCGSLRDA 121
Query: 194 LELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARL 253
E+F M +R++VS+ +I+ ++ + EA+ L+ +ML++ PD +++ CA
Sbjct: 122 REVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASS 181
Query: 254 GAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAM 313
+G+ +H+ +++ N+L+ Y + VF +PM++++SW+++
Sbjct: 182 SDVGLGKQLHAQVIKLESSSHLIA-QNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSI 240
Query: 314 ISGMAYNGMGEVGVGLFEDMVR-GVT-PNDSTFVGVLACCAHAGLVDRGRELFDSMAVKF 371
I+G + G + ++M+ GV PN+ F L C+ D G ++ + +K
Sbjct: 241 IAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQI-HGLCIKS 299
Query: 372 QLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHG 423
+L + D+ RCG + A + + P A W +++ +G
Sbjct: 300 ELAGNAIAGCSLCDMYARCGFLNSARRVFDQIE-RPDTASWNVIIAGLANNG 350
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 229 bits (583), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 135/458 (29%), Positives = 230/458 (50%), Gaps = 40/458 (8%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNH-SPNPNIILFNSIIKACSLS 85
Q+H +++G I + + + A R+F N++ + ++I +
Sbjct: 316 QLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQN 375
Query: 86 PPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPV 145
++ LFS M+ + + P+ FT+ +L A + +HAQV + R V
Sbjct: 376 DGKEEAVDLFSEMKR-KGVRPNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTV 430
Query: 146 RVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSV 205
+++ Y ++ +A KVF + ++D++ W+ M+ GY + GE E
Sbjct: 431 GTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEA------------- 477
Query: 206 VSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAA-DVGEWIHS 264
A+ +F E+ + G +P++ T ++L VCA A+ G+ H
Sbjct: 478 ------------------AIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHG 519
Query: 265 YANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGE 324
+A K L + V ++L+ Y K GN ++ VF +++VSWN+MISG A +G
Sbjct: 520 FA-IKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAM 578
Query: 325 VGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCV 383
+ +F++M R V + TF+GV A C HAGLV+ G + FD M ++ P EH C+
Sbjct: 579 KALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCM 638
Query: 384 VDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNS 443
VDL R G + +A+ +I +MP + +W +L+ACR H E+ +AA++++ ++P +S
Sbjct: 639 VDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDS 698
Query: 444 GHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
+VLLSN+YAE W E KVR LM E ++KK PG S
Sbjct: 699 AAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYS 736
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 164/377 (43%), Gaps = 35/377 (9%)
Query: 53 SLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFP 112
S R+ A +F+ SP + + S++ S Q+ LF L + + D F
Sbjct: 39 SSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLF-LNIHRLGMEMDCSIFS 97
Query: 113 SLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRER 172
S+LK ++ L D G+ LH Q GF
Sbjct: 98 SVLKVSATLCDELFGRQLHCQCIKFGFLD------------------------------- 126
Query: 173 DVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREML 232
DV V ++ Y K + G ++F M +R+VV+W +IS A+ +E L LF M
Sbjct: 127 DVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQ 186
Query: 233 EKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNP 292
+G +P+ T L V A G G +H+ G L + V NSL++ Y KCGN
Sbjct: 187 NEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG-LDKTIPVSNSLINLYLKCGNV 245
Query: 293 QAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACC 351
+ +F++ +++VV+WN+MISG A NG+ +G+F M + V ++S+F V+ C
Sbjct: 246 RKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLC 305
Query: 352 AHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAAL 411
A+ + R E VK+ L ++ +C + +AL L + +
Sbjct: 306 ANLKEL-RFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVS 364
Query: 412 WGALLSACRTHGDREIA 428
W A++S + +E A
Sbjct: 365 WTAMISGFLQNDGKEEA 381
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 228 bits (582), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 135/456 (29%), Positives = 222/456 (48%), Gaps = 34/456 (7%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
QIH+ ++ + + + I + A L ++ A + +++ + ++I +
Sbjct: 511 QIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN 570
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
+ F M + R I D + + A + L+ + GQ +HAQ GF+ P +
Sbjct: 571 FDDKALTTFRQMLD-RGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQ 629
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
+V LY+ C ++ ++ F++ D I
Sbjct: 630 NALVTLYSRCGKIEESYLAFEQTEAGDNI------------------------------- 658
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA 266
+WN ++S + EEAL +F M +G + ++ T + + + G+ +H+
Sbjct: 659 AWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVI 718
Query: 267 NDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVG 326
G+ + V N+L+ Y KCG+ F E+ +N VSWNA+I+ + +G G
Sbjct: 719 TKTGYDSE-TEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEA 777
Query: 327 VGLFEDMVRG-VTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVD 385
+ F+ M+ V PN T VGVL+ C+H GLVD+G F+SM ++ L PK EHY CVVD
Sbjct: 778 LDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVD 837
Query: 386 LLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGH 445
+L R G + A + I+ MP++P A +W LLSAC H + EI E AA L+ +EP +S
Sbjct: 838 MLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSAT 897
Query: 446 HVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
+VLLSN+YA +WD + R M+E +KK PGQS
Sbjct: 898 YVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQS 933
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 184/398 (46%), Gaps = 36/398 (9%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
Q+HA+ + G +N+I +++ A + A F + N++L+N ++ A L
Sbjct: 410 QLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLD 469
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
+ F +F M+ I P+ +T+PS+LK L D +LG+ +H+Q+ F
Sbjct: 470 DLRNSFRIFRQMQ-IEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF------- 521
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
+ + V +++I Y K+G+L+T ++ R + VV
Sbjct: 522 ------------------------QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVV 557
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA 266
SW MI+ + +++AL FR+ML++G D+ L + CA L A G+ IH+ A
Sbjct: 558 SWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQA 617
Query: 267 NDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVG 326
GF D+ N+LV Y +CG + F + + ++WNA++SG +G E
Sbjct: 618 CVSGFSSDL-PFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEA 676
Query: 327 VGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVD 385
+ +F M R G+ N+ TF + + + +G+++ ++ K + E ++
Sbjct: 677 LRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQV-HAVITKTGYDSETEVCNALIS 735
Query: 386 LLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHG 423
+ +CG + +A + + + W A+++A HG
Sbjct: 736 MYAKCGSISDAEKQFLEVSTKNEVS-WNAIINAYSKHG 772
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 164/407 (40%), Gaps = 44/407 (10%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
Q+H L+ G + +S+ L + A +F++ + + +N++I S
Sbjct: 309 QLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCG 368
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
++ LF M + + PD T SL+ A S GQ LHA T LGFA + +
Sbjct: 369 YGEKAMELFKRM-HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIE 427
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
++ LYA C + A F E +V++WN+M+ Y + +L +FR+M +V
Sbjct: 428 GALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV 487
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA 266
P+ T ++L C RLG ++GE IHS
Sbjct: 488 -------------------------------PNQYTYPSILKTCIRLGDLELGEQIHSQI 516
Query: 267 NDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVG 326
F + V + L+D Y K G + ++VVSW MI+G +
Sbjct: 517 IKTNFQLN-AYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKA 575
Query: 327 VGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVD 385
+ F M+ RG+ ++ ++ CA + G+++ V L +V
Sbjct: 576 LTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS-GFSSDLPFQNALVT 634
Query: 386 LLGRCGHVREALDLIRSMPMEPTAA----LWGALLSACRTHGDREIA 428
L RCG + E+ + E T A W AL+S + G+ E A
Sbjct: 635 LYSRCGKIEESY-----LAFEQTEAGDNIAWNALVSGFQQSGNNEEA 676
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 186/423 (43%), Gaps = 41/423 (9%)
Query: 2 SKGLQQIERRILSLLHGA-KTRTQLTQ---IHAHFLRHGLHHSNQILAHFISVCASLHRV 57
++G++ + + LL G KT L + +H+ L+ GL + + +
Sbjct: 77 NRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDL 136
Query: 58 PYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKA 117
A +VF+ P I +N +IK + + F LF M + ++P+ TF +L+A
Sbjct: 137 YGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMV-SENVTPNEGTFSGVLEA 195
Query: 118 A-SNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIV 176
F + + +HA++ G V +++LY+ + A +VFD +R +D
Sbjct: 196 CRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDH-- 253
Query: 177 WNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGF 236
SW MIS L+K + E EA+ LF +M G
Sbjct: 254 -----------------------------SSWVAMISGLSKNECEAEAIRLFCDMYVLGI 284
Query: 237 EPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGL 296
P +VL C ++ + ++GE +H GF D V N+LV Y GN +
Sbjct: 285 MPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTY-VCNALVSLYFHLGNLISAE 343
Query: 297 SVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACCAHAG 355
+F+ M R+ V++N +I+G++ G GE + LF+ M + G+ P+ +T ++ C+ G
Sbjct: 344 HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADG 403
Query: 356 LVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGAL 415
+ RG++L + K + G +++L +C + ALD +E LW +
Sbjct: 404 TLFRGQQL-HAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE-NVVLWNVM 461
Query: 416 LSA 418
L A
Sbjct: 462 LVA 464
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 146/456 (32%), Positives = 229/456 (50%), Gaps = 38/456 (8%)
Query: 28 IHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPP 87
+H L+ G + H + L + A ++F+ PN++ + S+I +
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 88 FQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRV 147
Q +F M R + P+ +TF S+ KA S L + ++G+++HA++ G R+ V
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 148 GVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVS 207
+V++Y C + A + V++ MI GY R+VVS
Sbjct: 171 SLVDMYGKCNDVETARR-----------VFDSMI-GY-----------------GRNVVS 201
Query: 208 WNLMISCLAKGKKEEEALVLFREMLEKGFEPDDAT---LVTVLPVCARLGAADVGEWIHS 264
W MI+ A+ + EA+ LFR D A L +V+ C+ LG G+ H
Sbjct: 202 WTSMITAYAQNARGHEAIELFRS-FNAALTSDRANQFMLASVISACSSLGRLQWGKVAHG 260
Query: 265 YANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGE 324
G+ + V V SL+D Y KCG+ +F + +V+S+ +MI A +G+GE
Sbjct: 261 LVTRGGYESNTV-VATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGE 319
Query: 325 VGVGLFEDMVRG-VTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCV 383
V LF++MV G + PN T +GVL C+H+GLV+ G E MA K+ ++P HY CV
Sbjct: 320 AAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCV 379
Query: 384 VDLLGRCGHVREALDLIRSMPM--EPTAALWGALLSACRTHGDREIAEIAAKELVNVEPW 441
VD+LGR G V EA +L +++ + E A LWGALLSA R HG EI A+K L+
Sbjct: 380 VDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQ 439
Query: 442 NSGHHVLLSNIYAEEMRWDEVEKVRVLM-REGHIKK 476
+ ++ LSN YA W++ E +R+ M R G++K+
Sbjct: 440 VTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKE 475
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 133/458 (29%), Positives = 226/458 (49%), Gaps = 36/458 (7%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
++HAH ++ + + + + A +V + P N++ + ++I S +
Sbjct: 73 RVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTG 132
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
+ +F+ M + P+ FTF ++L + LG+ +H + + H
Sbjct: 133 HSSEALTVFAEMMRSDG-KPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSH---- 187
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
+ V + ++ Y K G+++ E+F + +R VV
Sbjct: 188 ---------------------------IFVGSSLLDMYAKAGQIKEAREIFECLPERDVV 220
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA 266
S +I+ A+ +EEAL +F + +G P+ T ++L + L D G+ H +
Sbjct: 221 SCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHV 280
Query: 267 NDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVG 326
+ L + NSL+D Y KCGN +F+ MP R +SWNAM+ G + +G+G
Sbjct: 281 LRRE-LPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREV 339
Query: 327 VGLFEDM--VRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSM-AVKFQLLPKLEHYGCV 383
+ LF M + V P+ T + VL+ C+H + D G +FD M A ++ P EHYGC+
Sbjct: 340 LELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCI 399
Query: 384 VDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNS 443
VD+LGR G + EA + I+ MP +PTA + G+LL ACR H +I E + L+ +EP N+
Sbjct: 400 VDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENA 459
Query: 444 GHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
G++V+LSN+YA RW +V VR +M + + K PG+S
Sbjct: 460 GNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRS 497
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 149/329 (45%), Gaps = 44/329 (13%)
Query: 108 YFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFD 167
+ + +LL A + R + GQ +HA + + +R ++ Y C+ + DA KV D
Sbjct: 52 FHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLD 111
Query: 168 EMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVL 227
EM E++V+ W MI Y + G EAL +
Sbjct: 112 EMPEKNVVSWTAMISRYSQTGH-------------------------------SSEALTV 140
Query: 228 FREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYC 287
F EM+ +P++ T TVL C R +G+ IH + I VG+SL+D Y
Sbjct: 141 FAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIF-VGSSLLDMYA 199
Query: 288 KCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVG 346
K G + +F +P R+VVS A+I+G A G+ E + +F + G++PN T+
Sbjct: 200 KAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYAS 259
Query: 347 VLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYG----CVVDLLGRCGHVREALDLIRS 402
+L + L+D G++ A L +L Y ++D+ +CG++ A L +
Sbjct: 260 LLTALSGLALLDHGKQ-----AHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDN 314
Query: 403 MPMEPTAALWGALLSACRTHG-DREIAEI 430
MP E TA W A+L HG RE+ E+
Sbjct: 315 MP-ERTAISWNAMLVGYSKHGLGREVLEL 342
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 96/203 (47%), Gaps = 10/203 (4%)
Query: 205 VVSWNLMISCLAKGKKEEEALVLFREML--EKGFEPDDATLVTVLPVCARLGAADVGEWI 262
V+ L IS L + +EAL L ML E GF DA +L C A G+ +
Sbjct: 20 VLQTILPISQLCSNGRLQEAL-LEMAMLGPEMGFHGYDA----LLNACLDKRALRDGQRV 74
Query: 263 HSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGM 322
H++ +L + L+ FY KC + V +EMP +NVVSW AMIS + G
Sbjct: 75 HAHMIKTRYL-PATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGH 133
Query: 323 GEVGVGLFEDMVRGV-TPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYG 381
+ +F +M+R PN+ TF VL C A + G+++ + VK+ +
Sbjct: 134 SSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIH-GLIVKWNYDSHIFVGS 192
Query: 382 CVVDLLGRCGHVREALDLIRSMP 404
++D+ + G ++EA ++ +P
Sbjct: 193 SLLDMYAKAGQIKEAREIFECLP 215
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 133/421 (31%), Positives = 207/421 (49%), Gaps = 34/421 (8%)
Query: 63 VFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLR 122
VF+ + N+I ++I + + LFSLMR + P+ T+ S L A S +
Sbjct: 212 VFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRG-LVHPNSVTYLSALAACSGSQ 270
Query: 123 DFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQ 182
GQ +HA + G + ++++Y+ C
Sbjct: 271 RIVEGQQIHALLWKYGIESELCIESALMDMYSKC-------------------------- 304
Query: 183 GYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDAT 242
G +E +F + VS +++ LA+ EEEA+ F ML+ G E D
Sbjct: 305 -----GSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANV 359
Query: 243 LVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEM 302
+ VL V + +G+ +HS + F + V N L++ Y KCG+ +VF M
Sbjct: 360 VSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTF-VNNGLINMYSKCGDLTDSQTVFRRM 418
Query: 303 PMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGR 361
P RN VSWN+MI+ A +G G + L+E+M V P D TF+ +L C+H GL+D+GR
Sbjct: 419 PKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGR 478
Query: 362 ELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRT 421
EL + M + P+ EHY C++D+LGR G ++EA I S+P++P +W ALL AC
Sbjct: 479 ELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSF 538
Query: 422 HGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
HGD E+ E AA++L P +S H+L++NIY+ +W E K M+ + K G S
Sbjct: 539 HGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGIS 598
Query: 482 A 482
+
Sbjct: 599 S 599
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 127/236 (53%), Gaps = 4/236 (1%)
Query: 168 EMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVL 227
++ ++VWN ++ Y K G+L ++LF M R V+S N++ + ++ E VL
Sbjct: 84 DIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVL 143
Query: 228 FREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYC 287
+ ML G D ATL VL VC V + IH+ A G+ ++I SVGN L+ Y
Sbjct: 144 LKRMLGSG-GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEI-SVGNKLITSYF 201
Query: 288 KCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRG-VTPNDSTFVG 346
KCG +G VF+ M RNV++ A+ISG+ N + E G+ LF M RG V PN T++
Sbjct: 202 KCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLS 261
Query: 347 VLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRS 402
LA C+ + + G+++ ++ K+ + +L ++D+ +CG + +A + S
Sbjct: 262 ALAACSGSQRIVEGQQI-HALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFES 316
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/332 (19%), Positives = 133/332 (40%), Gaps = 34/332 (10%)
Query: 13 LSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNI 72
L+ G++ + QIHA ++G+ I + + + + + A +F + +
Sbjct: 263 LAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDE 322
Query: 73 ILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHA 132
+ I+ + + ++ F M A + D ++L + LG+ LH+
Sbjct: 323 VSMTVILVGLAQNGSEEEAIQFFIRMLQA-GVEIDANVVSAVLGVSFIDNSLGLGKQLHS 381
Query: 133 QVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELET 192
V F+ + V G++ +Y+ C + D+ VF M +R+ + WN MI + + G
Sbjct: 382 LVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGH--- 438
Query: 193 GLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCAR 252
GL AL L+ EM +P D T +++L C+
Sbjct: 439 GL----------------------------AALKLYEEMTTLEVKPTDVTFLSLLHACSH 470
Query: 253 LGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR-NVVSWN 311
+G D G + + + + ++D + G + S + +P++ + W
Sbjct: 471 VGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQ 530
Query: 312 AMISGMAYNGMGEVGVGLFEDMVRGVTPNDST 343
A++ +++G EVG E + + P+ S+
Sbjct: 531 ALLGACSFHGDTEVGEYAAEQLFQ-TAPDSSS 561
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%)
Query: 268 DKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGV 327
D R+ + V NSL+ Y KCG + +F+EMPMR+V+S N + G N E G
Sbjct: 82 DADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGF 141
Query: 328 GLFEDMVRGVTPNDSTFVGVLACC 351
L + M+ + +T VL+ C
Sbjct: 142 VLLKRMLGSGGFDHATLTIVLSVC 165
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 145/473 (30%), Positives = 229/473 (48%), Gaps = 34/473 (7%)
Query: 12 ILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNH-SPNP 70
+L+LL L Q+HA L+ GL H I IS A V A RVF+ +
Sbjct: 209 LLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSK 268
Query: 71 NIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSL 130
++I +NS+I S + F LF M+ + D +T+ LL A S G+SL
Sbjct: 269 DLISWNSMIAGFSKHELKESAFELFIQMQR-HWVETDIYTYTGLLSACSGEEHQIFGKSL 327
Query: 131 HAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGEL 190
H V G + ++ +Y IQ G +
Sbjct: 328 HGMVIKKGLEQVTSATNALISMY---------------------------IQ--FPTGTM 358
Query: 191 ETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVC 250
E L LF + + ++SWN +I+ A+ E+A+ F + + DD +L C
Sbjct: 359 EDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSC 418
Query: 251 ARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR-NVVS 309
+ L +G+ IH+ A GF+ + + +SL+ Y KCG ++ F ++ + + V+
Sbjct: 419 SDLATLQLGQQIHALATKSGFVSNEFVI-SSLIVMYSKCGIIESARKCFQQISSKHSTVA 477
Query: 310 WNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMA 368
WNAMI G A +G+G+V + LF M + V + TF +L C+H GL+ G EL + M
Sbjct: 478 WNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLME 537
Query: 369 VKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIA 428
+++ P++EHY VDLLGR G V +A +LI SMP+ P + L CR G+ E+A
Sbjct: 538 PVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMA 597
Query: 429 EIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
A L+ +EP + +V LS++Y++ +W+E V+ +M+E +KKVPG S
Sbjct: 598 TQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWS 650
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 157/335 (46%), Gaps = 42/335 (12%)
Query: 24 QLTQIHAHFLRHG----LHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSII 79
+L+ H + ++ G ++ SN+IL +I + YA +F+ P + + +N++I
Sbjct: 18 KLSLTHCYAIKCGSISDIYVSNRILDSYIK----FGFLGYANMLFDEMPKRDSVSWNTMI 73
Query: 80 KACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGF 139
+ + + LF+ M+ + + D ++F LLK ++++ F LG+ +H V G+
Sbjct: 74 SGYTSCGKLEDAWCLFTCMKRSGS-DVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGY 132
Query: 140 ARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRR 199
+ V +V++YA CER+ DA + F E+ E + + WN +I G+ +V +++T L
Sbjct: 133 ECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGL 192
Query: 200 MGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVG 259
M ++ V+ D T +L + ++
Sbjct: 193 MEMKAAVT------------------------------MDAGTFAPLLTLLDDPMFCNLL 222
Query: 260 EWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEM-PMRNVVSWNAMISGMA 318
+ +H+ G +I ++ N+++ Y CG+ VF+ + ++++SWN+MI+G +
Sbjct: 223 KQVHAKVLKLGLQHEI-TICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFS 281
Query: 319 YNGMGEVGVGLFEDMVRGVTPND-STFVGVLACCA 352
+ + E LF M R D T+ G+L+ C+
Sbjct: 282 KHELKESAFELFIQMQRHWVETDIYTYTGLLSACS 316
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 111/259 (42%), Gaps = 6/259 (2%)
Query: 173 DVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREML 232
D+ V N ++ Y K G L LF M R VSWN MIS K E+A LF M
Sbjct: 34 DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMK 93
Query: 233 EKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNP 292
G + D + +L A + D+GE +H G+ + V VG+SLVD Y KC
Sbjct: 94 RSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECN-VYVGSSLVDMYAKCERV 152
Query: 293 QAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVG---VGLFEDMVRGVTPNDSTFVGVLA 349
+ F E+ N VSWNA+I+G + +GL E M VT + TF +L
Sbjct: 153 EDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLME-MKAAVTMDAGTFAPLLT 211
Query: 350 CCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTA 409
+ +++ + +K L ++ ++ CG V +A + +
Sbjct: 212 LLDDPMFCNLLKQV-HAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDL 270
Query: 410 ALWGALLSACRTHGDREIA 428
W ++++ H +E A
Sbjct: 271 ISWNSMIAGFSKHELKESA 289
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 139/432 (32%), Positives = 213/432 (49%), Gaps = 38/432 (8%)
Query: 56 RVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLL 115
R+ A VF+ ++I + +I + + L LM+ + P+ T SL+
Sbjct: 268 RMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQ-FEGVRPNAVTIASLV 326
Query: 116 KAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVI 175
+ G+ LH + ++ +YA C+R+ +VF +
Sbjct: 327 SVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTG 386
Query: 176 VWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKG 235
W+ +I G C EL + +AL LF+ M +
Sbjct: 387 PWSAIIAG-CVQNELVS------------------------------DALGLFKRMRRED 415
Query: 236 FEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAG 295
EP+ ATL ++LP A L IH Y GF+ + LV Y KCG ++
Sbjct: 416 VEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSL-DAATGLVHVYSKCGTLESA 474
Query: 296 LSVFNEM----PMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLAC 350
+FN + ++VV W A+ISG +G G + +F +MVR GVTPN+ TF L
Sbjct: 475 HKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNA 534
Query: 351 CAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAA 410
C+H+GLV+ G LF M ++ L + HY C+VDLLGR G + EA +LI ++P EPT+
Sbjct: 535 CSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTST 594
Query: 411 LWGALLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMR 470
+WGALL+AC TH + ++ E+AA +L +EP N+G++VLL+NIYA RW ++EKVR +M
Sbjct: 595 VWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMME 654
Query: 471 EGHIKKVPGQSA 482
++K PG S
Sbjct: 655 NVGLRKKPGHST 666
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 181/412 (43%), Gaps = 37/412 (8%)
Query: 10 RRILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPN 69
+ +L+ ++ ++ +H H + G S IL+ A + YA ++F P
Sbjct: 19 QSLLNHFAATQSISKTKALHCHVITGG-RVSGHILSTLSVTYALCGHITYARKLFEEMPQ 77
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLF-SLMRNARAISPDYFTFPSLLKAASNLRDFQLGQ 128
+++ +N +I+ + +F ++ PD +T+P + KAA L+ +LG
Sbjct: 78 SSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGL 137
Query: 129 SLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVG 188
+H ++ F R D V N ++ Y G
Sbjct: 138 VVHGRILRSWFGR-------------------------------DKYVQNALLAMYMNFG 166
Query: 189 ELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLP 248
++E ++F M +R V+SWN MIS + +AL++F M+ + + D AT+V++LP
Sbjct: 167 KVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLP 226
Query: 249 VCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVV 308
VC L ++G +H +K L D + V N+LV+ Y KCG VF+ M R+V+
Sbjct: 227 VCGHLKDLEMGRNVHKLVEEKR-LGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVI 285
Query: 309 SWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSM 367
+W MI+G +G E + L M GV PN T +++ C A V+ G+ L
Sbjct: 286 TWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCL-HGW 344
Query: 368 AVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSAC 419
AV+ Q+ + ++ + +C V + T W A+++ C
Sbjct: 345 AVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGP-WSAIIAGC 395
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 9/214 (4%)
Query: 28 IHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPP 87
+H +R ++ I IS+ A RV RVF+ + + +++II C +
Sbjct: 341 LHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNEL 400
Query: 88 FQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRV 147
LF MR + P+ T SLL A + L D + ++H +T GF
Sbjct: 401 VSDALGLFKRMRR-EDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAAT 459
Query: 148 GVVELYANCERMGDAGKVFDEMRE----RDVIVWNLMIQGYCKVGELETGLELFRRMGDR 203
G+V +Y+ C + A K+F+ ++E +DV++W +I GY G+ L++F M
Sbjct: 460 GLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRS 519
Query: 204 SV----VSWNLMISCLAKGKKEEEALVLFREMLE 233
V +++ ++ + EE L LFR MLE
Sbjct: 520 GVTPNEITFTSALNACSHSGLVEEGLTLFRFMLE 553
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 145/478 (30%), Positives = 239/478 (50%), Gaps = 10/478 (2%)
Query: 12 ILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPN 71
+ S+L G Q+H ++ G + +S+ + A R+F P+ +
Sbjct: 135 VASVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKS 194
Query: 72 IILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLH 131
++ +N+ I + +F+LMR + P+ TF + + A ++L + Q G+ LH
Sbjct: 195 VVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLH 254
Query: 132 AQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRE-RDVIVWNLMIQGYCKVGEL 190
V F V ++++Y+ C A VF E+++ R++I WN +I G G+
Sbjct: 255 GLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQH 314
Query: 191 ETGLELFRRMGDRSV----VSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTV 246
ET +ELF ++ + +WN +IS ++ K EA F ML P L ++
Sbjct: 315 ETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSL 374
Query: 247 LPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFN--EMPM 304
L C+ + G+ IH + RDI V SL+D Y KCG +F+ E
Sbjct: 375 LSACSDIWTLKNGKEIHGHVIKAAAERDIF-VLTSLIDMYMKCGLSSWARRIFDRFEPKP 433
Query: 305 RNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVDRGREL 363
++ V WN MISG +G E + +FE + V P+ +TF VL+ C+H G V++G ++
Sbjct: 434 KDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQI 493
Query: 364 FDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHG 423
F M ++ P EH GC++DLLGR G +REA ++I M ++ +LL +CR H
Sbjct: 494 FRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHL 552
Query: 424 DREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
D + E AA +L +EP N V+LS+IYA RW++VE +R ++ + + K+PG S
Sbjct: 553 DPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 155/359 (43%), Gaps = 75/359 (20%)
Query: 105 SPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGK 164
SP+ FTFP LLK+ + L D G+ LHAQV GF +V +Y +++ DA K
Sbjct: 28 SPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALK 87
Query: 165 VFDEMRERDVIVWN-----LMIQGYCK---------------------------VGELET 192
V DEM ER + N L+ G+C+ G++E
Sbjct: 88 VLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEG 147
Query: 193 GLEL-----------------------------------FRRMGDRSVVSWNLMISCLAK 217
G++L F ++ +SVV++N IS L +
Sbjct: 148 GMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLME 207
Query: 218 GKKEEEALVLFREMLE-KGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIV 276
+F M + EP+D T V + CA L G +H K F + +
Sbjct: 208 NGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETM 267
Query: 277 SVGNSLVDFYCKCGNPQAGLSVFNEMP-MRNVVSWNAMISGMAYNGMGEVGVGLFEDM-V 334
VG +L+D Y KC ++ VF E+ RN++SWN++ISGM NG E V LFE +
Sbjct: 268 -VGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDS 326
Query: 335 RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHV 393
G+ P+ +T+ +++ + G V + F+ M + ++P L+ C+ LL C +
Sbjct: 327 EGLKPDSATWNSLISGFSQLGKVIEAFKFFERM-LSVVMVPSLK---CLTSLLSACSDI 381
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 80/187 (42%), Gaps = 7/187 (3%)
Query: 238 PDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLS 297
P+ T +L CA+LG G +H+ GF D+ + +LV Y K L
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFT-ATALVSMYMKVKQVTDALK 87
Query: 298 VFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGL 356
V +EMP R + S NA +SG+ NG +F D V G N T VL C G
Sbjct: 88 VLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GD 144
Query: 357 VDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALL 416
++ G +L +A+K ++ +V + RCG A + +P + + A +
Sbjct: 145 IEGGMQL-HCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVP-HKSVVTYNAFI 202
Query: 417 SACRTHG 423
S +G
Sbjct: 203 SGLMENG 209
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 142/528 (26%), Positives = 251/528 (47%), Gaps = 75/528 (14%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
QIH ++ GLH+ + +S+ + V A VF+ + + ++N+++ A + +
Sbjct: 293 QIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAEND 352
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
LF MR +++ PD FT +++ S L + G+S+HA++ +
Sbjct: 353 YGYSALDLFGFMRQ-KSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIE 411
Query: 147 VGVVELYANCE-------------------------------RMGDAGKVFDEMRERD-- 173
++ LY+ C + +A KVF +M++ D
Sbjct: 412 SALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDS 471
Query: 174 ---------------------------------------VIVWNLMIQGYCKVGELETGL 194
V V + +I Y K G E L
Sbjct: 472 LKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMAL 531
Query: 195 ELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLG 254
++F M ++V+WN MISC ++ E ++ LF ML +G PD ++ +VL +
Sbjct: 532 KVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTA 591
Query: 255 AADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMI 314
+ G+ +H Y G D + N+L+D Y KCG + ++F +M +++++WN MI
Sbjct: 592 SLLKGKSLHGYTLRLGIPSD-THLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMI 650
Query: 315 SGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQL 373
G +G + LF++M + G +P+D TF+ +++ C H+G V+ G+ +F+ M + +
Sbjct: 651 YGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGI 710
Query: 374 LPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAK 433
P +EHY +VDLLGR G + EA I++MP+E +++W LLSA RTH + E+ ++A+
Sbjct: 711 EPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAE 770
Query: 434 ELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
+L+ +EP +V L N+Y E +E K+ LM+E + K PG S
Sbjct: 771 KLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCS 818
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 172/404 (42%), Gaps = 47/404 (11%)
Query: 22 RTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNH-SPNPNIILFNSIIK 80
R + QIH LR+ L + + I + A RVF N++L+N +I
Sbjct: 186 REEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIV 245
Query: 81 ACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFA 140
S + L+ L +N ++ +F L A S + G+ +H V +G
Sbjct: 246 GFGGSGICESSLDLYMLAKN-NSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLH 304
Query: 141 RHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRM 200
V ++ +Y+ C +G+A VF C V
Sbjct: 305 NDPYVCTSLLSMYSKCGMVGEAETVFS-----------------CVV------------- 334
Query: 201 GDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGE 260
D+ + WN M++ A+ AL LF M +K PD TL V+ C+ LG + G+
Sbjct: 335 -DKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGK 393
Query: 261 WIHSYANDKGFLRDIVS---VGNSLVDFYCKCG-NPQAGLSVFNEMPMRNVVSWNAMISG 316
+H+ + F R I S + ++L+ Y KCG +P A L VF M +++V+W ++ISG
Sbjct: 394 SVHA----ELFKRPIQSTSTIESALLTLYSKCGCDPDAYL-VFKSMEEKDMVAWGSLISG 448
Query: 317 MAYNGMGEVGVGLFEDMV---RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQL 373
+ NG + + +F DM + P+ V CA + G ++ SM +K L
Sbjct: 449 LCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSM-IKTGL 507
Query: 374 LPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLS 417
+ + ++DL +CG AL + SM E A W +++S
Sbjct: 508 VLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVA-WNSMIS 550
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 159/361 (44%), Gaps = 59/361 (16%)
Query: 76 NSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVT 135
NS I+A + Q HL+S + FTFPSLLKA S L + G+++H V
Sbjct: 28 NSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVV 87
Query: 136 TLGFARHGP-VRVGVVELYANCERMGDAGKVFDEMRE-------RDVIVWNLMIQGYCKV 187
LG+ R+ P + +V +Y C + A +VFD + RDV VWN MI GY K
Sbjct: 88 VLGW-RYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK- 145
Query: 188 GELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVL 247
FRR +E + FR ML G PD +L V+
Sbjct: 146 ---------FRRF---------------------KEGVGCFRRMLVFGVRPDAFSLSIVV 175
Query: 248 PVCARLGA--ADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR 305
V + G + G+ IH + D + +L+D Y K G VF E+ +
Sbjct: 176 SVMCKEGNFRREEGKQIHGFMLRNSLDTDSF-LKTALIDMYFKFGLSIDAWRVFVEIEDK 234
Query: 306 -NVVSWNAMISGMAYNGMGEVGVGLF----EDMVRGVTPNDSTFVGVLACCAHAGLVDRG 360
NVV WN MI G +G+ E + L+ + V+ V+ ++F G L C+ + G
Sbjct: 235 SNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVS---TSFTGALGACSQSENSGFG 291
Query: 361 RELF-DSMAVKFQLLPKLEHYGC--VVDLLGRCGHVREALDLIRSMPMEPTAALWGALLS 417
R++ D + + P Y C ++ + +CG V EA + + S ++ +W A+++
Sbjct: 292 RQIHCDVVKMGLHNDP----YVCTSLLSMYSKCGMVGEA-ETVFSCVVDKRLEIWNAMVA 346
Query: 418 A 418
A
Sbjct: 347 A 347
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 158/544 (29%), Positives = 255/544 (46%), Gaps = 73/544 (13%)
Query: 10 RRILSLLHGAKTRTQLTQIHAHFLRHG-LHHSNQILAHFISVCASLHRVPYATRVFNHSP 68
+RI L +K + +TQIHA + G L + + I I+ C + + YA +VF+ P
Sbjct: 18 KRIKFLQSISKLKRHITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELP 77
Query: 69 ------------------NPNIIL-----------------FNSIIKACSLSPPFQQ--- 90
NP+ +L F IKAC ++
Sbjct: 78 QRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEA 137
Query: 91 ----------------CFHLFSLMRNARAISPDYFTFPSLLKA-----ASNLRDF-QLGQ 128
C + +L + F + K + + F Q G+
Sbjct: 138 VWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGK 197
Query: 129 SLHA-----QVTTLGFARHGPVRVGVVELYANC--ERMGDA--GKVFDEMRERDVIVWNL 179
SL A ++ GF R V +G+++ + +MG + G ++ +V+V
Sbjct: 198 SLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETS 257
Query: 180 MIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPD 239
++ Y KVG +E +F RM ++ VSW +IS A+ +A EM GF+PD
Sbjct: 258 LVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPD 317
Query: 240 DATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVF 299
TLV VL C+++G+ G +H Y + L + + +L+D Y KCG + +F
Sbjct: 318 LVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVTA--TALMDMYSKCGALSSSREIF 375
Query: 300 NEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRG-VTPNDSTFVGVLACCAHAGLVD 358
+ +++V WN MIS +G G+ V LF M + P+ +TF +L+ +H+GLV+
Sbjct: 376 EHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVE 435
Query: 359 RGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSA 418
+G+ F M K+++ P +HY C++DLL R G V EALD+I S ++ +W ALLS
Sbjct: 436 QGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSG 495
Query: 419 CRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVP 478
C H + + +IAA +++ + P + G L+SN +A +W EV KVR LMR G ++KVP
Sbjct: 496 CINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVP 555
Query: 479 GQSA 482
G SA
Sbjct: 556 GYSA 559
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 225 bits (573), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 153/472 (32%), Positives = 248/472 (52%), Gaps = 41/472 (8%)
Query: 15 LLHGAKTRTQLT--QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATR-VFNHSPNPN 71
LL A+TR+ + Q+H + ++ GL + + I+ S ++P+ +R F SP +
Sbjct: 22 LLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINF-YSKSQLPFDSRRAFEDSPQKS 80
Query: 72 IILFNSIIKACSLSP-PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSL 130
++SII + + P+ L +M A + PD PS K+ + L +G+S+
Sbjct: 81 STTWSSIISCFAQNELPWMSLEFLKKMM--AGNLRPDDHVLPSATKSCAILSRCDIGRSV 138
Query: 131 HAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGEL 190
H G+ + DV V + ++ Y K GE+
Sbjct: 139 HCLSMKTGY-------------------------------DADVFVGSSLVDMYAKCGEI 167
Query: 191 ETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVC 250
++F M R+VV+W+ M+ A+ + EEAL LF+E L + +D + +V+ VC
Sbjct: 168 VYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVC 227
Query: 251 ARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSW 310
A ++G IH + VG+SLV Y KCG P+ VFNE+P++N+ W
Sbjct: 228 ANSTLLELGRQIHGLSIKSS-FDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIW 286
Query: 311 NAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAV 369
NAM+ A + + + LF+ M + G+ PN TF+ VL C+HAGLVD GR FD M
Sbjct: 287 NAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMK- 345
Query: 370 KFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAE 429
+ ++ P +HY +VD+LGR G ++EAL++I +MP++PT ++WGALL++C H + E+A
Sbjct: 346 ESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAA 405
Query: 430 IAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
AA ++ + P +SG H+ LSN YA + R+++ K R L+R+ KK G S
Sbjct: 406 FAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLS 457
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 145/449 (32%), Positives = 230/449 (51%), Gaps = 39/449 (8%)
Query: 60 ATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAAS 119
A VF++ +++ +N+++ S F+ LF M+ + I D T+ + + +
Sbjct: 283 ANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEK-IKMDVVTWSAAISGYA 341
Query: 120 NLRDFQLGQSLHAQVTTLGFARH------GPVRVGVVELYANCERMGD----------AG 163
Q G A LG R P V ++ + + C +G A
Sbjct: 342 -----QRGLGYEA----LGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAI 392
Query: 164 KVFDEMRER----DVIVWNLMIQGYCKVGELETGLELFRRMG--DRSVVSWNLMISCLAK 217
K ++R+ + +V N +I Y K +++T +F + +R VV+W +MI ++
Sbjct: 393 KYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQ 452
Query: 218 GKKEEEALVLFREMLEKGFE--PDDATLVTVLPVCARLGAADVGEWIHSYA--NDKGFLR 273
+AL L EM E+ + P+ T+ L CA L A +G+ IH+YA N + +
Sbjct: 453 HGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVP 512
Query: 274 DIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM 333
VS N L+D Y KCG+ VF+ M +N V+W ++++G +G GE +G+F++M
Sbjct: 513 LFVS--NCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEM 570
Query: 334 VR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGH 392
R G + T + VL C+H+G++D+G E F+ M F + P EHY C+VDLLGR G
Sbjct: 571 RRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGR 630
Query: 393 VREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNI 452
+ AL LI MPMEP +W A LS CR HG E+ E AA+++ + + G + LLSN+
Sbjct: 631 LNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNL 690
Query: 453 YAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
YA RW +V ++R LMR +KK PG S
Sbjct: 691 YANAGRWKDVTRIRSLMRHKGVKKRPGCS 719
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 132/460 (28%), Positives = 210/460 (45%), Gaps = 80/460 (17%)
Query: 15 LLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSP--NPNI 72
+H KT +Q+ IH L G+ N + +H IS S+ + +A + P + +
Sbjct: 34 FIHKCKTISQVKLIHQKLLSFGILTLN-LTSHLISTYISVGCLSHAVSLLRRFPPSDAGV 92
Query: 73 ILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHA 132
+NS+I++ + +C +LF LM ++ + +PD +TFP + KA + + G+S HA
Sbjct: 93 YHWNSLIRSYGDNGCANKCLYLFGLM-HSLSWTPDNYTFPFVFKACGEISSVRCGESAHA 151
Query: 133 QVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELET 192
GF + V +V +Y+ C + DA KVFDEM DV+ WN +I+ Y K+G+ +
Sbjct: 152 LSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKV 211
Query: 193 GLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCAR 252
LE+F RM + E G PD+ TLV VLP CA
Sbjct: 212 ALEMFSRMTN------------------------------EFGCRPDNITLVNVLPPCAS 241
Query: 253 LGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNA 312
LG +G+ +H +A ++++ VGN LVD Y KCG +VF+ M +++VVSWNA
Sbjct: 242 LGTHSLGKQLHCFAVTSEMIQNMF-VGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNA 300
Query: 313 MISGMAYNGMGEVGVGLFEDM------------------------------------VRG 336
M++G + G E V LFE M G
Sbjct: 301 MVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG 360
Query: 337 VTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYG-------CVVDLLGR 389
+ PN+ T + VL+ CA G + G+E+ A+K+ + + +G ++D+ +
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEI-HCYAIKYPIDLRKNGHGDENMVINQLIDMYAK 419
Query: 390 CGHVREALDLIRSM-PMEPTAALWGALLSACRTHGDREIA 428
C V A + S+ P E W ++ HGD A
Sbjct: 420 CKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKA 459
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 146/467 (31%), Positives = 239/467 (51%), Gaps = 42/467 (8%)
Query: 57 VPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLF-SLMRNARAISPDYFTFPSLL 115
V A R+F P NI+ + ++I + + +++ LF + ++ A+SP+ T SL
Sbjct: 247 VREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLA 306
Query: 116 KAASNLR-DFQ-LGQSLHAQVTTLGFA---RHGPVRVGVVELYANCERMGDAGKVFDE-- 168
A L +F+ LG+ LHAQV + G+ G + +V +YA+ + A + +E
Sbjct: 307 YACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESF 366
Query: 169 -----------------------MRER-----DVIVWNLMIQGYCKVGELETGLELFRRM 200
+ ER D + W MI GY + G++ LF+++
Sbjct: 367 DLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKL 426
Query: 201 GDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGE 260
D+ V+W +MIS L + + EA L +M+ G +P ++T +L D G+
Sbjct: 427 HDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGK 486
Query: 261 WIHS-YANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAY 319
IH A + + NSLV Y KCG + +F +M ++ VSWN+MI G+++
Sbjct: 487 HIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSH 546
Query: 320 NGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLE 378
+G+ + + LF++M+ G PN TF+GVL+ C+H+GL+ RG ELF +M + + P ++
Sbjct: 547 HGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGID 606
Query: 379 HYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSAC----RTHGDREIAEIAAKE 434
HY ++DLLGR G ++EA + I ++P P ++GALL C R IAE AA
Sbjct: 607 HYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMR 666
Query: 435 LVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
L+ ++P N+ HV L N+YA R D +++R M +KK PG S
Sbjct: 667 LLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCS 713
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 100/213 (46%), Gaps = 45/213 (21%)
Query: 149 VVELYANCE--RMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
V L A C+ R DA ++FDEM ER+V+ WN ++ G + G++E ++F M R VV
Sbjct: 142 TVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVV 201
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA 266
SWN MI + EEA +LF +M EK +V W
Sbjct: 202 SWNAMIKGYIENDGMEEAKLLFGDMSEK----------------------NVVTW----- 234
Query: 267 NDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVG 326
S+V YC+ G+ + +F EMP RN+VSW AMISG A+N +
Sbjct: 235 -------------TSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREA 281
Query: 327 VGLFEDM---VRGVTPNDSTFVGVLACCAHAGL 356
+ LF +M V V+PN T + + C G+
Sbjct: 282 LMLFLEMKKDVDAVSPNGETLISLAYACGGLGV 314
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 147/359 (40%), Gaps = 70/359 (19%)
Query: 148 GVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVS 207
+++ Y + M +A +F +M E++V+ W M+ GYC+ G++ LF M +R++VS
Sbjct: 205 AMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVS 264
Query: 208 WNLMISCLAKGKKEEEALVLFREMLE--KGFEPDDATLVTVLPVCARLGAA--DVGEWIH 263
W MIS A + EAL+LF EM + P+ TL+++ C LG +GE +H
Sbjct: 265 WTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLH 324
Query: 264 SYANDKGF--LRDIVSVGNSLVDFYCKCGNPQAGLSVFNE-------------------- 301
+ G+ + + SLV Y G + S+ NE
Sbjct: 325 AQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDL 384
Query: 302 ----------MPMRNVVSWNAMISGMAYNGMGEVGVGLFE-------------------- 331
+ + VSW +MI G G GLF+
Sbjct: 385 ERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQN 444
Query: 332 -----------DMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLL-PKLE 378
DMVR G+ P +ST+ +L+ +D+G+ + +A P L
Sbjct: 445 ELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLI 504
Query: 379 HYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVN 437
+V + +CG + +A ++ M + T + W +++ HG + A KE+++
Sbjct: 505 LQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVS-WNSMIMGLSHHGLADKALNLFKEMLD 562
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 137/461 (29%), Positives = 230/461 (49%), Gaps = 41/461 (8%)
Query: 27 QIHAHFLRHGLHHSNQI-LAHFISVCASLHRVPYATRVFNHSPNPNIILFNSII----KA 81
Q+H+ +R GL + L + C++ V +VF+ + +++ + ++I K
Sbjct: 290 QLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKN 349
Query: 82 CSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFAR 141
C+L+ + +LFS M + P++FTF S KA NL D ++G+ + Q G A
Sbjct: 350 CNLAT---EAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLAS 406
Query: 142 HGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMG 201
+ V V+ ++ +RM DA + F+ +
Sbjct: 407 NSSVANSVISMFVKSDRMEDAQRAFESL-------------------------------S 435
Query: 202 DRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEW 261
++++VS+N + + E+A L E+ E+ T ++L A +G+ GE
Sbjct: 436 EKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQ 495
Query: 262 IHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNG 321
IHS G L V N+L+ Y KCG+ VFN M RNV+SW +MI+G A +G
Sbjct: 496 IHSQVVKLG-LSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHG 554
Query: 322 MGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHY 380
+ F M+ GV PN+ T+V +L+ C+H GLV G F+SM ++ PK+EHY
Sbjct: 555 FAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHY 614
Query: 381 GCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEP 440
C+VDLL R G + +A + I +MP + +W L ACR H + E+ ++AA++++ ++P
Sbjct: 615 ACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDP 674
Query: 441 WNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
++ LSNIYA +W+E ++R M+E ++ K G S
Sbjct: 675 NEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCS 715
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 137/319 (42%), Gaps = 43/319 (13%)
Query: 107 DYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVF 166
D TF SLLK+ RDF+LG+ +HA++
Sbjct: 61 DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDI--------------------------- 93
Query: 167 DEMRERDVIVWNLMIQGYCKVGE---LETGLELFRRMGDRSVVSWNLMISCLAKGKKEEE 223
E D +++N +I Y K G+ E E RR G R VVSW+ M++C +E +
Sbjct: 94 ----EPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELD 149
Query: 224 ALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLV 283
A+ +F E LE G P+D V+ C+ VG + G V VG SL+
Sbjct: 150 AIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLI 209
Query: 284 DFYCKCGNP-QAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPND 341
D + K N + VF++M NVV+W MI+ G + F DMV G +
Sbjct: 210 DMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDK 269
Query: 342 STFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRC---GHVREALD 398
T V + CA + G++L S A++ L+ +E +VD+ +C G V +
Sbjct: 270 FTLSSVFSACAELENLSLGKQL-HSWAIRSGLVDDVE--CSLVDMYAKCSADGSVDDCRK 326
Query: 399 LIRSMPMEPTAALWGALLS 417
+ M + + W AL++
Sbjct: 327 VFDRME-DHSVMSWTALIT 344
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 165/419 (39%), Gaps = 80/419 (19%)
Query: 62 RVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMR-------------------NAR 102
R+ P+ +L+NS+I S S + +F MR N R
Sbjct: 87 RLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGR 146
Query: 103 AIS--------------PDYFTFPSLLKAASNLRDFQLGQ-SLHAQVTTLGFARHGPVRV 147
+ P+ + + ++++A SN +G+ +L + T F V
Sbjct: 147 ELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGC 206
Query: 148 GVVELYANCER-MGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
+++++ E +A KVFD+M E +V+ W LMI ++G F R
Sbjct: 207 SLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMG--------FPR------- 251
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA 266
EA+ F +M+ GFE D TL +V CA L +G+ +HS+A
Sbjct: 252 ----------------EAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWA 295
Query: 267 NDKGFLRDIVSVGNSLVDFYCKC---GNPQAGLSVFNEMPMRNVVSWNAMISGMAYN-GM 322
G + D V SLVD Y KC G+ VF+ M +V+SW A+I+G N +
Sbjct: 296 IRSGLVDD---VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNL 352
Query: 323 GEVGVGLFEDMVRG--VTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHY 380
+ LF +M+ V PN TF C + G+++ A K L
Sbjct: 353 ATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVL-GQAFKRGLASNSSVA 411
Query: 381 GCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRT----HGDREIAEIAAKEL 435
V+ + + + +A S+ + + L CR + ++EI +EL
Sbjct: 412 NSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITEREL 470
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 222 bits (565), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 138/464 (29%), Positives = 231/464 (49%), Gaps = 14/464 (3%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
++H H G I + + A + A +VF+ PN ++ +N ++ +
Sbjct: 106 KVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVG 165
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
++ LF M D +++ +++ + L++ + + +R
Sbjct: 166 LLEEARKLFDEM-----TEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFT 220
Query: 147 VGVVELYA---NCERMGDA--GKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMG 201
V + A C R G G + + D ++W+ ++ Y K G ++ +F ++
Sbjct: 221 VSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIV 280
Query: 202 DRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEW 261
++ VVSW MI K + E LF E++ P++ T VL CA L ++G+
Sbjct: 281 EKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQ 340
Query: 262 IHSYANDKGFLRDIVS-VGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYN 320
+H Y GF D S +SLVD Y KCGN ++ V + P ++VSW ++I G A N
Sbjct: 341 VHGYMTRVGF--DPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQN 398
Query: 321 GMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEH 379
G + + F+ +++ G P+ TFV VL+ C HAGLV++G E F S+ K +L +H
Sbjct: 399 GQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDH 458
Query: 380 YGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVE 439
Y C+VDLL R G + +I MPM+P+ LW ++L C T+G+ ++AE AA+EL +E
Sbjct: 459 YTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIE 518
Query: 440 PWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQSAT 483
P N +V ++NIYA +W+E K+R M+E + K PG S T
Sbjct: 519 PENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWT 562
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 161/330 (48%), Gaps = 5/330 (1%)
Query: 101 ARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMG 160
RA P T+ +L++ S R + G+ +H + T GF + ++ +YA C +
Sbjct: 78 GRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLV 137
Query: 161 DAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKK 220
DA KVFDEM RD+ WN+M+ GY +VG LE +LF M ++ SW M++ K +
Sbjct: 138 DARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQ 197
Query: 221 EEEALVLFREMLE-KGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVG 279
EEALVL+ M P+ T+ + A + G+ IH + G D V +
Sbjct: 198 PEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEV-LW 256
Query: 280 NSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRGVT- 338
+SL+D Y KCG ++F+++ ++VVSW +MI + G LF ++V
Sbjct: 257 SSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCER 316
Query: 339 PNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALD 398
PN+ TF GVL CA + G+++ M + P +VD+ +CG++ A
Sbjct: 317 PNEYTFAGVLNACADLTTEELGKQVHGYM-TRVGFDPYSFASSSLVDMYTKCGNIESAKH 375
Query: 399 LIRSMPMEPTAALWGALLSACRTHGDREIA 428
++ P +P W +L+ C +G + A
Sbjct: 376 VVDGCP-KPDLVSWTSLIGGCAQNGQPDEA 404
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 230 EMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKC 289
++L + +P +T ++ VC++ A + G+ +H + GF+ IV + N L+ Y KC
Sbjct: 75 QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIV-IWNRLLRMYAKC 133
Query: 290 GNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMV 334
G+ VF+EMP R++ SWN M++G A G+ E LF++M
Sbjct: 134 GSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMT 178
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 221 bits (563), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 140/460 (30%), Positives = 221/460 (48%), Gaps = 44/460 (9%)
Query: 27 QIHAHFLRHGLHHS---NQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACS 83
Q+H ++ GL S + L HF C + A RVF + +++L+N+++ +
Sbjct: 163 QLHCLMVKQGLESSCFPSTSLVHFYGKCG---LIVEARRVFEAVLDRDLVLWNALVSSYV 219
Query: 84 LSPPFQQCFHLFSLM-RNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARH 142
L+ + F L LM + DYFTF SLL A + G+ +HA + + +
Sbjct: 220 LNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFD 275
Query: 143 GPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGD 202
PV ++ +YA + DA E F M
Sbjct: 276 IPVATALLNMYAKSNHLSDAR-------------------------------ECFESMVV 304
Query: 203 RSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWI 262
R+VVSWN MI A+ + EA+ LF +ML + +PD+ T +VL CA+ A + +
Sbjct: 305 RNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQV 364
Query: 263 HSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGM 322
+ KG D +SV NSL+ Y + GN L F+ + ++VSW ++I +A +G
Sbjct: 365 QAMVTKKG-SADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGF 423
Query: 323 GEVGVGLFEDMVRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGC 382
E + +FE M++ + P+ TF+ VL+ C+H GLV G F M +++ + EHY C
Sbjct: 424 AEESLQMFESMLQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTC 483
Query: 383 VVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWN 442
++DLLGR G + EA D++ SMP EP+ A C H RE + AK+L+ +EP
Sbjct: 484 LIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTK 543
Query: 443 SGHHVLLSNIYAEEMRWDEVEKVRVLMREG-HIKKVPGQS 481
++ +LSN Y E W++ +R R + K PG S
Sbjct: 544 PVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCS 583
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 169/412 (41%), Gaps = 47/412 (11%)
Query: 23 TQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKA- 81
+ + Q H ++ G+++S + + + A ++F+ P NI+ +N +I
Sbjct: 53 SDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGV 112
Query: 82 ------CSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVT 135
+ C+ L + +S D+ +F L++ ++ + + G LH +
Sbjct: 113 IQRDGDTNHRAHLGFCYLSRILFTD---VSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMV 169
Query: 136 TLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLE 195
G +V Y C + +A +VF+ + +RD+++WN ++ Y G ++
Sbjct: 170 KQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFG 229
Query: 196 LFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGA 255
L + MG + F D T ++L C
Sbjct: 230 LLKLMGSD-----------------------------KNRFRGDYFTFSSLLSAC----R 256
Query: 256 ADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMIS 315
+ G+ IH+ + DI V +L++ Y K + F M +RNVVSWNAMI
Sbjct: 257 IEQGKQIHAILFKVSYQFDI-PVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIV 315
Query: 316 GMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLL 374
G A NG G + LF M + + P++ TF VL+ CA + +++ +M K
Sbjct: 316 GFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQV-QAMVTKKGSA 374
Query: 375 PKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDRE 426
L ++ R G++ EAL S+ EP W +++ A +HG E
Sbjct: 375 DFLSVANSLISSYSRNGNLSEALLCFHSIR-EPDLVSWTSVIGALASHGFAE 425
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 158/536 (29%), Positives = 247/536 (46%), Gaps = 81/536 (15%)
Query: 27 QIHAHFLRHGL-HHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLS 85
++H H + GL I +++ A + A RVF + + + +NS+I +
Sbjct: 334 EVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQN 393
Query: 86 PPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPV 145
F + + MR I P FT S L + ++L+ +LGQ +H + LG + V
Sbjct: 394 GCFIEAVERYKSMRR-HDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSV 452
Query: 146 RVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQG---------------------- 183
++ LYA + + K+F M E D + WN +I
Sbjct: 453 SNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAG 512
Query: 184 -------------------YCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEA 224
+ ++G+ GL L + D + N +I+C K + +
Sbjct: 513 QKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTE-NALIACYGKCGEMDGC 571
Query: 225 LVLFREMLEK--------------------------------GFEPDDATLVTVLPVCAR 252
+F M E+ G D TVL A
Sbjct: 572 EKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFAS 631
Query: 253 LGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNA 312
+ + G +H+ + D+V VG++LVD Y KCG L FN MP+RN SWN+
Sbjct: 632 VATLERGMEVHACSVRACLESDVV-VGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNS 690
Query: 313 MISGMAYNGMGEVGVGLFEDM-VRGVTPNDS-TFVGVLACCAHAGLVDRGRELFDSMAVK 370
MISG A +G GE + LFE M + G TP D TFVGVL+ C+HAGL++ G + F+SM+
Sbjct: 691 MISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDS 750
Query: 371 FQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSA-CRTHGDR-EIA 428
+ L P++EH+ C+ D+LGR G + + D I MPM+P +W +L A CR +G + E+
Sbjct: 751 YGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELG 810
Query: 429 EIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQSATT 484
+ AA+ L +EP N+ ++VLL N+YA RW+++ K R M++ +KK G S T
Sbjct: 811 KKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVT 866
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 155/368 (42%), Gaps = 39/368 (10%)
Query: 57 VPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLK 116
V YA F N + +NSII S + + F +FS M+ + P +TF SL+
Sbjct: 156 VGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS-RPTEYTFGSLVT 214
Query: 117 AASNLR--DFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDV 174
A +L D +L + + + G V G+V +A + A KVF++M R+
Sbjct: 215 TACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNA 274
Query: 175 IVWNLMIQGYCKVGELETGLELFRRMG---DRSVVSWNLMISCLAKGKKEEEALVLFREM 231
+ N ++ G + E +LF M D S S+ +++S + EE
Sbjct: 275 VTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEV------G 328
Query: 232 LEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGN 291
L+KG E +H + G + +V +GN LV+ Y KCG+
Sbjct: 329 LKKGRE------------------------VHGHVITTGLVDFMVGIGNGLVNMYAKCGS 364
Query: 292 PQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLAC 350
VF M ++ VSWN+MI+G+ NG V ++ M R + P T + L+
Sbjct: 365 IADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSS 424
Query: 351 CAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAA 410
CA G+++ ++K + + ++ L G++ E + SMP E
Sbjct: 425 CASLKWAKLGQQIHGE-SLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQV 482
Query: 411 LWGALLSA 418
W +++ A
Sbjct: 483 SWNSIIGA 490
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 132/298 (44%), Gaps = 14/298 (4%)
Query: 164 KVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEE 223
+++ ++DV + N +I Y + G+ + ++F M R+ VSW ++S ++ + +E
Sbjct: 26 RLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKE 85
Query: 224 ALVLFREMLEKGFEPDDATLVTVLPVCARLGAADV--GEWIHSYANDKGFLRDIVSVGNS 281
ALV R+M+++G + V+VL C +G+ + G IH + D V V N
Sbjct: 86 ALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAV-VSNV 144
Query: 282 LVDFYCKC-GNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTP 339
L+ Y KC G+ L F ++ ++N VSWN++IS + G +F M G P
Sbjct: 145 LISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRP 204
Query: 340 NDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQ---LLPKLEHYGCVVDLLGRCGHVREA 396
+ TF G L A L + L + + Q LL L +V + G + A
Sbjct: 205 TEYTF-GSLVTTA-CSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYA 262
Query: 397 LDLIRSMPMEPTAALWGALLSACRTHGDREIAEI--AAKELVNVEPWNSGHHVLLSNI 452
+ M L G ++ R E ++ +++V P + +LLS+
Sbjct: 263 RKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSP--ESYVILLSSF 318
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 133/428 (31%), Positives = 214/428 (50%), Gaps = 8/428 (1%)
Query: 60 ATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAAS 119
A VF P +N +I + + C LF M + PD +TF SL+ A S
Sbjct: 157 ALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESE-FKPDCYTFSSLMNACS 215
Query: 120 -NLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWN 178
+ + G+ +HA + G++ + V+ Y DA + + + + WN
Sbjct: 216 ADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWN 275
Query: 179 LMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEP 238
+I K+GE E LE+F ++++V+W MI+ + E+AL F EM++ G +
Sbjct: 276 SIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDS 335
Query: 239 DDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSV 298
D VL C+ L G+ IH GF + VGN+LV+ Y KCG+ +
Sbjct: 336 DHFAYGAVLHACSGLALLGHGKMIHGCLIHCGF-QGYAYVGNALVNLYAKCGDIKEADRA 394
Query: 299 FNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLV 357
F ++ +++VSWN M+ +G+ + + L+++M+ G+ P++ TF+G+L C+H+GLV
Sbjct: 395 FGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLV 454
Query: 358 DRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPT----AALWG 413
+ G +F+SM +++ +++H C++D+ GR GH+ EA DL + T + W
Sbjct: 455 EEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWE 514
Query: 414 ALLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGH 473
LL AC TH E+ +K L EP VLLSN+Y RW E E VR M E
Sbjct: 515 TLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERG 574
Query: 474 IKKVPGQS 481
+KK PG S
Sbjct: 575 MKKTPGCS 582
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 194/420 (46%), Gaps = 42/420 (10%)
Query: 42 QILAHFISVCASLH---RVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLM 98
+L S ASL R+ A +VF+ P + + +N+++ + S Q+ LF+ +
Sbjct: 2 SVLVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQL 61
Query: 99 RNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCER 158
R + A PD ++F ++L ++L + + G+ + + V GF PV ++++Y C
Sbjct: 62 RFSDA-KPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSD 120
Query: 159 MGDAGKVFDEM--RERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLA 216
A KVF +M R+ + W ++ Y + E L++F M R +WN+MIS A
Sbjct: 121 TLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHA 180
Query: 217 KGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADV-GEWIHSYANDKGF---- 271
K E L LF+EMLE F+PD T +++ C+ + V G +H+ G+
Sbjct: 181 HCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAV 240
Query: 272 -------------------LRDIVSVG-------NSLVDFYCKCGNPQAGLSVFNEMPMR 305
+R++ S+ NS++D K G + L VF+ P +
Sbjct: 241 EAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEK 300
Query: 306 NVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELF 364
N+V+W MI+G NG GE + F +M++ GV + + VL C+ L+ G+ +
Sbjct: 301 NIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIH 360
Query: 365 DSMA-VKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHG 423
+ FQ + + +V+L +CG ++EA + + + W +L A HG
Sbjct: 361 GCLIHCGFQGYAYVGN--ALVNLYAKCGDIKEADRAFGDIANKDLVS-WNTMLFAFGVHG 417
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 134/459 (29%), Positives = 221/459 (48%), Gaps = 40/459 (8%)
Query: 28 IHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPP 87
+H + R G + + + V A + YA RVF+ N + ++++I +
Sbjct: 227 VHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEM 286
Query: 88 FQQCFHLFSLM---RNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGP 144
++ +F M N ++P +L + D G+ +H GF
Sbjct: 287 IKEAGEVFFQMLVNDNVAMVTP--VAIGLILMGCARFGDLSGGRCVHCYAVKAGFIL--- 341
Query: 145 VRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRS 204
D+ V N +I Y K G L F +G +
Sbjct: 342 ----------------------------DLTVQNTIISFYAKYGSLCDAFRQFSEIGLKD 373
Query: 205 VVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHS 264
V+S+N +I+ + EE+ LF EM G PD TL+ VL C+ L A G H
Sbjct: 374 VISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHG 433
Query: 265 YANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGE 324
Y G+ + S+ N+L+D Y KCG VF+ M R++VSWN M+ G +G+G+
Sbjct: 434 YCVVHGYAVN-TSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGK 492
Query: 325 VGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAV-KFQLLPKLEHYGC 382
+ LF M GV P++ T + +L+ C+H+GLVD G++LF+SM+ F ++P+++HY C
Sbjct: 493 EALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNC 552
Query: 383 VVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWN 442
+ DLL R G++ EA D + MP EP + G LLSAC T+ + E+ +K++ ++
Sbjct: 553 MTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGE-T 611
Query: 443 SGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
+ VLLSN Y+ RW++ ++R++ ++ + K PG S
Sbjct: 612 TESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYS 650
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 148/340 (43%), Gaps = 54/340 (15%)
Query: 111 FPSLLKAASNLRDFQLGQSLHAQVTTLGFA-RHGPVRVGVVELYANCERMGDAGKVFDEM 169
F SLL+ R+ LGQ +H + V V + LYA+C + A VFDE+
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 170 RERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFR 229
+ + ++W+LMI A E+AL L+
Sbjct: 62 PHPRI-----------------------------NPIAWDLMIRAYASNDFAEKALDLYY 92
Query: 230 EMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKC 289
+ML G P T VL CA L A D G+ IHS+ N F D+ V +LVDFY KC
Sbjct: 93 KMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMY-VCTALVDFYAKC 151
Query: 290 GNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR--GVTPNDSTFVGV 347
G + + VF+EMP R++V+WNAMISG + + +GLF DM R G++PN ST VG+
Sbjct: 152 GELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGM 211
Query: 348 LACCAHAGLVDRGRELF---------DSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALD 398
AG + G+ + + + VK +L C++ + R D
Sbjct: 212 FPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCII-------YARRVFD 264
Query: 399 LIRSMPMEPTAALWGALLSA-CRTHGDREIAEIAAKELVN 437
L + W A++ +E E+ + LVN
Sbjct: 265 L----DFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVN 300
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 180/402 (44%), Gaps = 48/402 (11%)
Query: 28 IHAHFLRHGLH-HSNQILAHFISVCASLHRVPYATRVFNHSPNPNI--ILFNSIIKACSL 84
IH H L+ L S+ +L + + AS + V A VF+ P+P I I ++ +I+A +
Sbjct: 21 IHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYAS 80
Query: 85 SPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGP 144
+ ++ L+ M N+ + P +T+P +LKA + LR G+ +H+ V FA
Sbjct: 81 NDFAEKALDLYYKMLNS-GVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMY 139
Query: 145 VRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRS 204
V +V+ YA C + A KVFDEM +RD++ WN MI G+
Sbjct: 140 VCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFS------------------- 180
Query: 205 VVSWNLMISCLAKGKKEEEALVLFREMLE-KGFEPDDATLVTVLPVCARLGAADVGEWIH 263
+ CL + + LF +M G P+ +T+V + P R GA G+ +H
Sbjct: 181 ------LHCCLT------DVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVH 228
Query: 264 SYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGM- 322
Y GF D+V V ++D Y K VF+ +N V+W+AMI G N M
Sbjct: 229 GYCTRMGFSNDLV-VKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMI 287
Query: 323 GEVGVGLFE----DMVRGVTPNDSTFVG-VLACCAHAGLVDRGRELFDSMAVKFQLLPKL 377
E G F+ D V VTP +G +L CA G + GR AVK + L
Sbjct: 288 KEAGEVFFQMLVNDNVAMVTP---VAIGLILMGCARFGDLSGGR-CVHCYAVKAGFILDL 343
Query: 378 EHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSAC 419
++ + G + +A + ++ + + +L++ C
Sbjct: 344 TVQNTIISFYAKYGSLCDAFRQFSEIGLKDVIS-YNSLITGC 384
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 135/424 (31%), Positives = 213/424 (50%), Gaps = 35/424 (8%)
Query: 60 ATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAAS 119
A +VF+ P+ + +N++I ++ LF M + SPD +T S+ ++
Sbjct: 44 ARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREM-HGLGFSPDEYTLGSVFSGSA 102
Query: 120 NLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNL 179
LR +GQ +H G E D++V +
Sbjct: 103 GLRSVSIGQQIHGYTIKYGL-------------------------------ELDLVVNSS 131
Query: 180 MIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPD 239
+ Y + G+L+ G + R M R++V+WN +I A+ E L L++ M G P+
Sbjct: 132 LAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPN 191
Query: 240 DATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVF 299
T VTVL C+ L G+ IH+ A G + V +SL+ Y KCG F
Sbjct: 192 KITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVV-SSLISMYSKCGCLGDAAKAF 250
Query: 300 NEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR--GVTPNDSTFVGVLACCAHAGLV 357
+E + V W++MIS ++G G+ + LF M + N+ F+ +L C+H+GL
Sbjct: 251 SEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLK 310
Query: 358 DRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLS 417
D+G ELFD M K+ P L+HY CVVDLLGR G + +A +IRSMP++ +W LLS
Sbjct: 311 DKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLS 370
Query: 418 ACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKV 477
AC H + E+A+ KE++ ++P +S +VLL+N++A RW +V +VR MR+ ++KK
Sbjct: 371 ACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKE 430
Query: 478 PGQS 481
G S
Sbjct: 431 AGIS 434
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 144/275 (52%), Gaps = 4/275 (1%)
Query: 150 VELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWN 209
+ +Y+ A V+ MR+++ + N++I GY + G+L ++F M DR + +WN
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 210 LMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDK 269
MI+ L + + EE L LFREM GF PD+ TL +V A L + +G+ IH Y
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 270 GFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGL 329
G D+V V +SL Y + G Q G V MP+RN+V+WN +I G A NG E + L
Sbjct: 121 GLELDLV-VNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYL 179
Query: 330 FEDM-VRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLG 388
++ M + G PN TFV VL+ C+ + +G+++ + A+K + ++ +
Sbjct: 180 YKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIH-AEAIKIGASSVVAVVSSLISMYS 238
Query: 389 RCGHVREALDLIRSMPMEPTAALWGALLSACRTHG 423
+CG + +A S + +W +++SA HG
Sbjct: 239 KCGCLGDAAKAF-SEREDEDEVMWSSMISAYGFHG 272
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 146/334 (43%), Gaps = 53/334 (15%)
Query: 27 QIHAHFLRHGLHHS---NQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACS 83
QIH + +++GL N LAH L R P N++ +N++I +
Sbjct: 112 QIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSM---PVRNLVAWNTLIMGNA 168
Query: 84 LSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHG 143
+ + +L+ +M+ P+ TF ++L + S+L GQ +HA+ +G +
Sbjct: 169 QNGCPETVLYLYKMMK-ISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVV 227
Query: 144 PVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDR 203
V ++ +Y+ C +GDA K F E + D ++W+ MI Y G+ + +ELF M ++
Sbjct: 228 AVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQ 287
Query: 204 S------VVSWNLMISCLAKGKKEEEALVLFREMLEK-GFEPDDATLVTVLPVCARLGAA 256
+ V NL+ +C G K ++ L LF M+EK GF+P V+ + R G
Sbjct: 288 TNMEINEVAFLNLLYACSHSGLK-DKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCL 346
Query: 257 DVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR-NVVSWNAMIS 315
D E ++ MP++ ++V W ++S
Sbjct: 347 DQAE------------------------------------AIIRSMPIKTDIVIWKTLLS 370
Query: 316 GMAYNGMGEVGVGLFEDMVRGVTPNDSTFVGVLA 349
+ E+ +F+++++ + PNDS +LA
Sbjct: 371 ACNIHKNAEMAQRVFKEILQ-IDPNDSACYVLLA 403
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 218 bits (556), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 127/388 (32%), Positives = 207/388 (53%), Gaps = 39/388 (10%)
Query: 97 LMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANC 156
L+ NA ++P T ++A++++ G+ +HA V GF + PV +++LY
Sbjct: 205 LLENAE-VTPYCITIA--VRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLY--- 258
Query: 157 ERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLA 216
C+ G L F M D+ +++WN +IS L
Sbjct: 259 ----------------------------CRCGYLSEAKHYFHEMEDKDLITWNTLISELE 290
Query: 217 KGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIV 276
+ E AL++F+ +GF P+ T +++ CA + A + G+ +H +GF ++ V
Sbjct: 291 RSDSSE-ALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKN-V 348
Query: 277 SVGNSLVDFYCKCGNPQAGLSVFNEM-PMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR 335
+ N+L+D Y KCGN VF E+ RN+VSW +M+ G +G G V LF+ MV
Sbjct: 349 ELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVS 408
Query: 336 -GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVR 394
G+ P+ F+ VL+ C HAGLV++G + F+ M ++ + P + Y CVVDLLGR G +
Sbjct: 409 SGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIG 468
Query: 395 EALDLIRSMPMEPTAALWGALLSACRTHG-DREIAEIAAKELVNVEPWNSGHHVLLSNIY 453
EA +L+ MP +P + WGA+L AC+ H + I+ +AA++++ ++P G +V+LS IY
Sbjct: 469 EAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIY 528
Query: 454 AEEMRWDEVEKVRVLMREGHIKKVPGQS 481
A E +W + +VR +MR KK G S
Sbjct: 529 AAEGKWVDFARVRKMMRMMGNKKEAGMS 556
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/391 (20%), Positives = 173/391 (44%), Gaps = 40/391 (10%)
Query: 34 RHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFH 93
+H + +N I+++F V A +F+ P+ +++ + ++I + S + +
Sbjct: 43 KHHILATNLIVSYF-----EKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWE 97
Query: 94 LFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELY 153
F M + SP+ FT S+LK+ N++ G +H V LG V ++ +Y
Sbjct: 98 CFHEMVK-QGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMY 156
Query: 154 ANCE-RMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMI 212
A C M A +F +++ ++ + W +I G+ +G+ GL+++++M
Sbjct: 157 ATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQM------------ 204
Query: 213 SCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFL 272
+LE E + + A + + G+ IH+ +GF
Sbjct: 205 ------------------LLENA-EVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQ 245
Query: 273 RDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFED 332
++ V NS++D YC+CG F+EM +++++WN +IS + + E +
Sbjct: 246 SNL-PVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDSSEALLMFQRF 304
Query: 333 MVRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGH 392
+G PN TF ++A CA+ ++ G++L + + +E ++D+ +CG+
Sbjct: 305 ESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRI-FRRGFNKNVELANALIDMYAKCGN 363
Query: 393 VREALDLIRSMPMEPTAALWGALLSACRTHG 423
+ ++ + + W +++ +HG
Sbjct: 364 IPDSQRVFGEIVDRRNLVSWTSMMIGYGSHG 394
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 120/254 (47%), Gaps = 14/254 (5%)
Query: 170 RERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFR 229
++ ++ NL++ Y + G +E LF M DR VV+W MI+ A A F
Sbjct: 42 KKHHILATNLIVS-YFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFH 100
Query: 230 EMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKC 289
EM+++G P++ TL +VL C + G +H G + + V N++++ Y C
Sbjct: 101 EMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLG-MEGSLYVDNAMMNMYATC 159
Query: 290 G-NPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMV---RGVTPNDSTFV 345
+A +F ++ ++N V+W +I+G + G G G+ +++ M+ VTP +
Sbjct: 160 SVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTP----YC 215
Query: 346 GVLACCAHAGL--VDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSM 403
+A A A + V G+++ S+ +K L ++DL RCG++ EA M
Sbjct: 216 ITIAVRASASIDSVTTGKQIHASV-IKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEM 274
Query: 404 PMEPTAALWGALLS 417
+ W L+S
Sbjct: 275 E-DKDLITWNTLIS 287
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 129/456 (28%), Positives = 221/456 (48%), Gaps = 34/456 (7%)
Query: 28 IHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPP 87
+H +R G + ++ ++ A A +F ++I ++++I +
Sbjct: 185 VHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGA 244
Query: 88 FQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRV 147
+ +F+ M + P+ T +L+A + D + G+ H G V
Sbjct: 245 AAEALLVFNDMMD-DGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVST 303
Query: 148 GVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVS 207
+V++Y C +A VF + +DV+ W +I G+ G M RS+
Sbjct: 304 ALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNG-----------MAHRSIEE 352
Query: 208 WNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYAN 267
+++M +LE PD +V VL C+ LG + + HSY
Sbjct: 353 FSIM-------------------LLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVI 393
Query: 268 DKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGV 327
GF + +G SLV+ Y +CG+ VFN + +++ V W ++I+G +G G +
Sbjct: 394 KYGFDSNPF-IGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKAL 452
Query: 328 GLFEDMVRG--VTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVD 385
F MV+ V PN+ TF+ +L+ C+HAGL+ G +F M ++L P LEHY +VD
Sbjct: 453 ETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVD 512
Query: 386 LLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGH 445
LLGR G + A+++ + MP PT + G LL ACR H + E+AE AK+L +E ++G+
Sbjct: 513 LLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGY 572
Query: 446 HVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
++L+SN+Y + W+ VEK+R +++ IKK +S
Sbjct: 573 YMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAES 608
Score = 154 bits (390), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 188/409 (45%), Gaps = 43/409 (10%)
Query: 24 QLTQIHAHFLRHGLHHSNQILAHFISVCASL-------HRVPYATRVFNHSPNPNIILFN 76
+L +++ + HG + L + V +SL R+ A R+F+ P+I+ ++
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 77 SIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTT 136
S++ + Q F M A ++PD T +L+ A + L + +LG+ +H V
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR 191
Query: 137 LGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLEL 196
GF+ D+ + N ++ Y K + + L
Sbjct: 192 RGFSN-------------------------------DLSLVNSLLNCYAKSRAFKEAVNL 220
Query: 197 FRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAA 256
F+ + ++ V+SW+ +I+C + EAL++F +M++ G EP+ AT++ VL CA
Sbjct: 221 FKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDL 280
Query: 257 DVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISG 316
+ G H A KG L V V +LVD Y KC +P+ +VF+ +P ++VVSW A+ISG
Sbjct: 281 EQGRKTHELAIRKG-LETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISG 339
Query: 317 MAYNGMGEVGVGLFEDMV--RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLL 374
NGM + F M+ P+ V VL C+ G +++ + F S +K+
Sbjct: 340 FTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAK-CFHSYVIKYGFD 398
Query: 375 PKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHG 423
+V+L RCG + A + + ++ T +W +L++ HG
Sbjct: 399 SNPFIGASLVELYSRCGSLGNASKVFNGIALKDT-VVWTSLITGYGIHG 446
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 109/244 (44%), Gaps = 5/244 (2%)
Query: 183 GYC-KVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDA 241
G+C K ++F M RS+ WN ++ L++ K+ EE L F M +PD+
Sbjct: 2 GFCRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNF 61
Query: 242 TLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNE 301
TL L C L + GE IH + L + VG+SL+ Y KCG L +F+E
Sbjct: 62 TLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDE 121
Query: 302 MPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRG--VTPNDSTFVGVLACCAHAGLVDR 359
+ ++V+W++M+SG NG V F MV VTP+ T + +++ C
Sbjct: 122 LEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRL 181
Query: 360 GRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSAC 419
GR ++ L +++ + +EA++L + M E W +++
Sbjct: 182 GR-CVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFK-MIAEKDVISWSTVIACY 239
Query: 420 RTHG 423
+G
Sbjct: 240 VQNG 243
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 110/292 (37%), Gaps = 30/292 (10%)
Query: 12 ILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPN 71
+L A Q + H +R GL ++ + + A VF+ P +
Sbjct: 270 VLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKD 329
Query: 72 IILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLH 131
++ + ++I +L+ + FS+M PD +L + S L + + H
Sbjct: 330 VVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFH 389
Query: 132 AQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELE 191
+ V GF + + +VELY+ C +G+A KVF+ + +D +VW +I GY G+
Sbjct: 390 SYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGT 449
Query: 192 TGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCA 251
LE F M S V +P++ T +++L C+
Sbjct: 450 KALETFNHMVKSSEV------------------------------KPNEVTFLSILSACS 479
Query: 252 RLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMP 303
G G I + L + LVD + G+ + + MP
Sbjct: 480 HAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMP 531
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 138/440 (31%), Positives = 218/440 (49%), Gaps = 40/440 (9%)
Query: 44 LAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARA 103
L + C L RV + + NI+ +NS+I + Q LF M R
Sbjct: 345 LVELYAECGKLSDCETVLRVVS---DRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQR- 400
Query: 104 ISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAG 163
I PD FT S + A N LG+ +H V +R V
Sbjct: 401 IKPDAFTLASSISACENAGLVPLGKQIHGHV----------IRTDV-------------- 436
Query: 164 KVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEE 223
D V N +I Y K G +++ +F ++ RSVV+WN M+ ++ E
Sbjct: 437 --------SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVE 488
Query: 224 ALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLV 283
A+ LF M E ++ T + V+ C+ +G+ + G+W+H G L+D+ + +L+
Sbjct: 489 AISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISG-LKDLFT-DTALI 546
Query: 284 DFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDS 342
D Y KCG+ A +VF M R++VSW++MI+ +G + F MV G PN+
Sbjct: 547 DMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEV 606
Query: 343 TFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRS 402
F+ VL+ C H+G V+ G+ F+ M F + P EH+ C +DLL R G ++EA I+
Sbjct: 607 VFMNVLSACGHSGSVEEGKYYFNLMK-SFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKE 665
Query: 403 MPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEV 462
MP A++WG+L++ CR H +I + +L ++ ++G++ LLSNIYAEE W+E
Sbjct: 666 MPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEF 725
Query: 463 EKVRVLMREGHIKKVPGQSA 482
++R M+ ++KKVPG SA
Sbjct: 726 RRLRSAMKSSNLKKVPGYSA 745
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 179/400 (44%), Gaps = 45/400 (11%)
Query: 25 LTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATR-VFNHSPNPNIILFNSIIKA-- 81
++Q+HAH L G + + + + P ++R VF P P+ ++ +IK
Sbjct: 17 VSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNV 76
Query: 82 -CSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRD-FQLGQSLHAQVTTLGF 139
C L +H L+ IS F FPS+L+A + R+ +G +H ++ G
Sbjct: 77 WCHLLDAAIDLYH--RLVSETTQISK--FVFPSVLRACAGSREHLSVGGKVHGRIIKGGV 132
Query: 140 ARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRR 199
+ ++ +Y + DA KVFD M RD+
Sbjct: 133 DDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDL------------------------- 167
Query: 200 MGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVG 259
V+W+ ++S + + +AL +F+ M++ G EPD T+++V+ CA LG +
Sbjct: 168 ------VAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIA 221
Query: 260 EWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAY 319
+H K F D ++ NSL+ Y KCG+ + +F ++ +N VSW AMIS
Sbjct: 222 RSVHGQITRKMFDLD-ETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNR 280
Query: 320 NGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLE 378
E + F +M++ G+ PN T VL+ C GL+ G+ + AV+ +L P E
Sbjct: 281 GEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVH-GFAVRRELDPNYE 339
Query: 379 HYG-CVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLS 417
+V+L CG + + ++R + A W +L+S
Sbjct: 340 SLSLALVELYAECGKLSDCETVLRVVSDRNIVA-WNSLIS 378
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 167/349 (47%), Gaps = 36/349 (10%)
Query: 19 AKTRTQLT---QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILF 75
A +R L+ ++H ++ G+ I + + + A +VF+ P +++ +
Sbjct: 111 AGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAW 170
Query: 76 NSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVT 135
++++ +C + + +F M + + PD T S+++ + L ++ +S+H Q+T
Sbjct: 171 STLVSSCLENGEVVKALRMFKCMVD-DGVEPDAVTMISVVEGCAELGCLRIARSVHGQIT 229
Query: 136 TLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLE 195
K+FD D + N ++ Y K G+L +
Sbjct: 230 R---------------------------KMFD----LDETLCNSLLTMYSKCGDLLSSER 258
Query: 196 LFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGA 255
+F ++ ++ VSW MIS +G+ E+AL F EM++ G EP+ TL +VL C +G
Sbjct: 259 IFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGL 318
Query: 256 ADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMIS 315
G+ +H +A + + S+ +LV+ Y +CG +V + RN+V+WN++IS
Sbjct: 319 IREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLIS 378
Query: 316 GMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGREL 363
A+ GM +GLF MV + + P+ T ++ C +AGLV G+++
Sbjct: 379 LYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQI 427
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 215 bits (547), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 137/460 (29%), Positives = 215/460 (46%), Gaps = 39/460 (8%)
Query: 28 IHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKAC----- 82
IH + + G+ + + + A + A ++F+ P+ N++ +N++I
Sbjct: 274 IHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDE 333
Query: 83 SLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARH 142
+ F LF M+ R + P TF +LKA S + + G+ +HA + F
Sbjct: 334 ITDEASSEAFKLFMDMQR-RGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSD 392
Query: 143 GPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGD 202
+ ++ELYA LM G E G++ F
Sbjct: 393 EFIGSALIELYA------------------------LM-------GSTEDGMQCFASTSK 421
Query: 203 RSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWI 262
+ + SW MI C + ++ E A LFR++ P++ T+ ++ CA A GE I
Sbjct: 422 QDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQI 481
Query: 263 HSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGM 322
YA G + SV S + Y K GN VF E+ +V +++AMIS +A +G
Sbjct: 482 QGYAIKSG-IDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGS 540
Query: 323 GEVGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYG 381
+ +FE M G+ PN F+GVL C H GLV +G + F M +++ P +H+
Sbjct: 541 ANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFT 600
Query: 382 CVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPW 441
C+VDLLGR G + +A +LI S + W ALLS+CR + D I + A+ L+ +EP
Sbjct: 601 CLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPE 660
Query: 442 NSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
SG +VLL NIY + E+VR LMR+ +KK P S
Sbjct: 661 ASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALS 700
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 155/346 (44%), Gaps = 46/346 (13%)
Query: 29 HAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPPF 88
H H ++ L+ +L + +++ + +A ++F+ P NII FNS+I + +
Sbjct: 70 HGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFY 129
Query: 89 QQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVG 148
+Q LF R A + D FT+ L D LG+ LH V G ++
Sbjct: 130 EQAMELFLEAREAN-LKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQ------ 182
Query: 149 VVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSW 208
V + N++I Y K G+L+ + LF R +R VSW
Sbjct: 183 -------------------------VFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSW 217
Query: 209 NLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCA---RLGAADVGEWIHSY 265
N +IS + EE L L +M G L +VL C G + G IH Y
Sbjct: 218 NSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCY 277
Query: 266 ANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEV 325
G DIV V +L+D Y K G+ + + +F+ MP +NVV++NAMISG + M E+
Sbjct: 278 TAKLGMEFDIV-VRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISG--FLQMDEI 334
Query: 326 -------GVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGREL 363
LF DM RG+ P+ STF VL C+ A ++ GR++
Sbjct: 335 TDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQI 380
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 115/241 (47%), Gaps = 13/241 (5%)
Query: 184 YCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATL 243
YCK EL +LF RM +R+++S+N +IS + E+A+ LF E E + D T
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 244 VTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMP 303
L C D+GE +H G + + + N L+D Y KCG +S+F+
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLI-NVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 304 MRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVL-ACCA--HAGLVDR 359
R+ VSWN++ISG G E + L M R G+ VL ACC + G +++
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEK 270
Query: 360 GRELF---DSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALL 416
G + + ++F ++ + ++D+ + G ++EA+ L MP + A++
Sbjct: 271 GMAIHCYTAKLGMEFDIVVRT----ALLDMYAKNGSLKEAIKLFSLMP-SKNVVTYNAMI 325
Query: 417 S 417
S
Sbjct: 326 S 326
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 92/258 (35%), Gaps = 33/258 (12%)
Query: 12 ILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPN 71
+L AKT QIHA ++ I + I + A + + F + +
Sbjct: 364 VLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQD 423
Query: 72 IILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLH 131
I + S+I + + F LF + ++ I P+ +T ++ A ++ G+ +
Sbjct: 424 IASWTSMIDCHVQNEQLESAFDLFRQLFSSH-IRPEEYTVSLMMSACADFAALSSGEQIQ 482
Query: 132 AQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELE 191
G V+ + +YA M A +VF E++ DV ++ M
Sbjct: 483 GYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAM----------- 531
Query: 192 TGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCA 251
IS LA+ EAL +F M G +P+ + VL C
Sbjct: 532 --------------------ISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACC 571
Query: 252 RLGAADVG-EWIHSYAND 268
G G ++ ND
Sbjct: 572 HGGLVTQGLKYFQCMKND 589
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 215 bits (547), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 135/463 (29%), Positives = 228/463 (49%), Gaps = 44/463 (9%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
QIH L+ G ++ + + + R+ A +VF + ++I +N++I +
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Query: 87 PFQQCFHLFSLMRNARAIS-PDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGP- 144
+ F +M+ A PD FT SLLKA S+ G+ +H + GF H P
Sbjct: 188 YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGF--HCPS 245
Query: 145 ---VRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMG 201
+ +V+LY C + A K FD+++E
Sbjct: 246 SATITGSLVDLYVKCGYLFSARKAFDQIKE------------------------------ 275
Query: 202 DRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEW 261
++++SW+ +I A+ + EA+ LF+ + E + D L +++ V A G+
Sbjct: 276 -KTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQ 334
Query: 262 IHSYAND--KGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAY 319
+ + A G SV NS+VD Y KCG F EM +++V+SW +I+G
Sbjct: 335 MQALAVKLPSGLE---TSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGK 391
Query: 320 NGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLE 378
+G+G+ V +F +M+R + P++ ++ VL+ C+H+G++ G ELF + + P++E
Sbjct: 392 HGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVE 451
Query: 379 HYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNV 438
HY CVVDLLGR G ++EA LI +MP++P +W LLS CR HGD E+ + K L+ +
Sbjct: 452 HYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRI 511
Query: 439 EPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
+ N ++V++SN+Y + W+E R L +KK G S
Sbjct: 512 DAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMS 554
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 182/405 (44%), Gaps = 40/405 (9%)
Query: 24 QLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPY-ATRVFNHSPNPNIILFNSIIKAC 82
Q Q+H + L+ G N I ++++ R P A +VF+ P N++ +++++
Sbjct: 24 QGGQVHCYLLKSG-SGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGH 82
Query: 83 SLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARH 142
L+ + LFS M + I P+ FTF + LKA L + G +H +GF
Sbjct: 83 VLNGDLKGSLSLFSEM-GRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMM 141
Query: 143 GPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGD 202
V +V++Y+ C R+ +A KV FRR+ D
Sbjct: 142 VEVGNSLVDMYSKCGRINEAEKV-------------------------------FRRIVD 170
Query: 203 RSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFE--PDDATLVTVLPVCARLGAADVGE 260
RS++SWN MI+ +AL F M E + PD+ TL ++L C+ G G+
Sbjct: 171 RSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGK 230
Query: 261 WIHSYANDKGF-LRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAY 319
IH + GF ++ SLVD Y KCG + F+++ + ++SW+++I G A
Sbjct: 231 QIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQ 290
Query: 320 NGMGEVGVGLFEDMVRGVTPNDS-TFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLE 378
G +GLF+ + + DS ++ A L+ +G+++ ++AVK +
Sbjct: 291 EGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQM-QALAVKLPSGLETS 349
Query: 379 HYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHG 423
VVD+ +CG V EA M ++ + W +++ HG
Sbjct: 350 VLNSVVDMYLKCGLVDEAEKCFAEMQLKDVIS-WTVVITGYGKHG 393
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 127/259 (49%), Gaps = 12/259 (4%)
Query: 173 DVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREML 232
++I N +I YCK E ++F M +R+VVSW+ ++S + +L LF EM
Sbjct: 40 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 99
Query: 233 EKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNP 292
+G P++ T T L C L A + G IH + GF +V VGNSLVD Y KCG
Sbjct: 100 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGF-EMMVEVGNSLVDMYSKCGRI 158
Query: 293 QAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGV---GLFEDMVRGVTPNDSTFVGVLA 349
VF + R+++SWNAMI+G + G G + G+ ++ P++ T +L
Sbjct: 159 NEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLK 218
Query: 350 CCAHAGLVDRGRELFDSMAVK-FQLLPKLEHYGCVVDLLGRCGHV---REALDLIRSMPM 405
C+ G++ G+++ + F G +VDL +CG++ R+A D I+
Sbjct: 219 ACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK---- 274
Query: 406 EPTAALWGALLSACRTHGD 424
E T W +L+ G+
Sbjct: 275 EKTMISWSSLILGYAQEGE 293
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 99/179 (55%), Gaps = 6/179 (3%)
Query: 242 TLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNE 301
LV++L VC R G +D G +H Y G ++++ N L+D YCKC P VF+
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLIT-SNYLIDMYCKCREPLMAYKVFDS 66
Query: 302 MPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRG 360
MP RNVVSW+A++SG NG + + LF +M R G+ PN+ TF L C +++G
Sbjct: 67 MPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKG 126
Query: 361 RELFD-SMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSA 418
++ + + F+++ +E +VD+ +CG + EA + R + ++ + W A+++
Sbjct: 127 LQIHGFCLKIGFEMM--VEVGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWNAMIAG 182
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 215 bits (547), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 124/459 (27%), Positives = 228/459 (49%), Gaps = 35/459 (7%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
QIH + + + + +S+ A ++ A F+ +++ +N++I + +
Sbjct: 134 QIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANA 193
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
F LF LM PD FTF SLL+A+ ++ ++ LH LGF R +
Sbjct: 194 CADTSFSLFQLML-TEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALI 252
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
+V Y C + +A K+ + ++RD++ +I G+ + +
Sbjct: 253 RSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTS-------------- 298
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA 266
+A +F++M+ + D+ + ++L +C + + +G IH +A
Sbjct: 299 ----------------DAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFA 342
Query: 267 NDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVG 326
+R V++GNSL+D Y K G + + F EM ++V SW ++I+G +G E
Sbjct: 343 LKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKA 402
Query: 327 VGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVD 385
+ L+ M + PND TF+ +L+ C+H G + G +++D+M K + + EH C++D
Sbjct: 403 IDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIID 462
Query: 386 LLGRCGHVREALDLIRSMP--MEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNS 443
+L R G++ EA LIRS + +++ WGA L ACR HG+ +++++AA +L+++EP
Sbjct: 463 MLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKP 522
Query: 444 GHHVLLSNIYAEEMRWDEVEKVRVLMRE-GHIKKVPGQS 481
+++ L+++YA WD R LM+E G K PG S
Sbjct: 523 VNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYS 561
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 173/420 (41%), Gaps = 36/420 (8%)
Query: 11 RILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNP 70
+ L L + QL IH + + +G + Q+ I + V +A ++F+
Sbjct: 17 KALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKR 76
Query: 71 NIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSL 130
+++ + ++I S LF M + + FT+ S+LK+ +L + G +
Sbjct: 77 DVVSWTAMISRFSRCGYHPDALLLFKEMHR-EDVKANQFTYGSVLKSCKDLGCLKEGMQI 135
Query: 131 HAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGEL 190
H V A + VR ++ LYA C +M +A FD M+ERD++ WN MI GY
Sbjct: 136 HGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACA 195
Query: 191 ETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVC 250
+T LF+ M L +GKK PD T ++L
Sbjct: 196 DTSFSLFQLM--------------LTEGKK-----------------PDCFTFGSLLRAS 224
Query: 251 ARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSW 310
+ ++ +H A GF R + SLV+ Y KCG+ + R+++S
Sbjct: 225 IVVKCLEIVSELHGLAIKLGFGRSSALI-RSLVNAYVKCGSLANAWKLHEGTKKRDLLSC 283
Query: 311 NAMISGMA-YNGMGEVGVGLFEDMVRGVTPNDSTFV-GVLACCAHAGLVDRGRELFDSMA 368
A+I+G + N +F+DM+R T D V +L C V GR++
Sbjct: 284 TALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFAL 343
Query: 369 VKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIA 428
Q+ + ++D+ + G + +A+ M E W +L++ HG+ E A
Sbjct: 344 KSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMK-EKDVRSWTSLIAGYGRHGNFEKA 402
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 106/243 (43%), Gaps = 20/243 (8%)
Query: 25 LTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSL 84
++++H ++ G S+ ++ ++ + A ++ + +++ ++I S
Sbjct: 233 VSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQ 292
Query: 85 SPP-FQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFA-RH 142
F +F M + D S+LK + + +G+ +H GFA +
Sbjct: 293 QNNCTSDAFDIFKDMIRMKT-KMDEVVVSSMLKICTTIASVTIGRQIH------GFALKS 345
Query: 143 GPVRVGV------VELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLEL 196
+R V +++YA + DA F+EM+E+DV W +I GY + G E ++L
Sbjct: 346 SQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDL 405
Query: 197 FRRMGDRSV----VSWNLMISCLAKGKKEEEALVLFREMLEK-GFEPDDATLVTVLPVCA 251
+ RM + V++ ++S + + E ++ M+ K G E + L ++ + A
Sbjct: 406 YNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLA 465
Query: 252 RLG 254
R G
Sbjct: 466 RSG 468
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 132/433 (30%), Positives = 211/433 (48%), Gaps = 43/433 (9%)
Query: 90 QCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGV 149
Q +F M A + P+ T S + A S L+ G +H+ +GF V +
Sbjct: 335 QALDMFRKMFLA-GVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSL 393
Query: 150 VELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGD------- 202
V++Y+ C ++ DA KVFD ++ +DV WN MI GYC+ G ELF RM D
Sbjct: 394 VDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNI 453
Query: 203 ---------------------------------RSVVSWNLMISCLAKGKKEEEALVLFR 229
R+ +WNL+I+ + K++EAL LFR
Sbjct: 454 ITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFR 513
Query: 230 EMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKC 289
+M F P+ T++++LP CA L A + IH + L I +V N+L D Y K
Sbjct: 514 KMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRN-LDAIHAVKNALTDTYAKS 572
Query: 290 GNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVL 348
G+ + ++F M +++++WN++I G +G + LF M +G+TPN T ++
Sbjct: 573 GDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSII 632
Query: 349 ACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPT 408
G VD G+++F S+A + ++P LEH +V L GR + EAL I+ M ++
Sbjct: 633 LAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSE 692
Query: 409 AALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVL 468
+W + L+ CR HGD ++A AA+ L ++EP N+ ++S IYA + +
Sbjct: 693 TPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKP 752
Query: 469 MREGHIKKVPGQS 481
R+ +KK GQS
Sbjct: 753 RRDNLLKKPLGQS 765
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 194/437 (44%), Gaps = 50/437 (11%)
Query: 28 IHAHFLRHGLHHSNQIL--AHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLS 85
+HA F GL + +S+ A + A +VF+ N+ ++++I A S
Sbjct: 103 LHARF---GLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRE 159
Query: 86 PPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPV 145
+++ LF LM + PD F FP +L+ +N D + G+ +H+ V LG + V
Sbjct: 160 NRWREVAKLFRLMMK-DGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRV 218
Query: 146 RVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSV 205
++ +YA C + A K F MRERDVI WN ++ YC+ G+ E +EL + M +
Sbjct: 219 SNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGI 278
Query: 206 ----VSWNL-----------------------------------MISCLAKGKKEEEALV 226
V+WN+ MIS L +AL
Sbjct: 279 SPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALD 338
Query: 227 LFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFY 286
+FR+M G P+ T+++ + C+ L + G +HS A GF+ D++ VGNSLVD Y
Sbjct: 339 MFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVL-VGNSLVDMY 397
Query: 287 CKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRG-VTPNDSTFV 345
KCG + VF+ + ++V +WN+MI+G G LF M + PN T+
Sbjct: 398 SKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWN 457
Query: 346 GVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPM 405
+++ G +LF M ++ + ++ + G EAL+L R M
Sbjct: 458 TMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQF 517
Query: 406 E---PTAALWGALLSAC 419
P + +LL AC
Sbjct: 518 SRFMPNSVTILSLLPAC 534
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 226/457 (49%), Gaps = 37/457 (8%)
Query: 28 IHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPP 87
+H ++ G + I++ + + RV PN +++ + +I
Sbjct: 267 LHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGR 326
Query: 88 FQQCFHLFS-LMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
++ +FS ++++ +S + S++ + + L F LG S+H V G+ P
Sbjct: 327 AEKALIVFSEMLQSGSDLSSE--AIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPAL 384
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
++ +YA C G L+ L +F RM +R +V
Sbjct: 385 NSLITMYAKC-------------------------------GHLDKSLVIFERMNERDLV 413
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDA-TLVTVLPVCARLGAADVGEWIHSY 265
SWN +IS A+ +AL+LF EM K + D+ T+V++L C+ GA VG+ IH
Sbjct: 414 SWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCI 473
Query: 266 ANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEV 325
+ F+R V +LVD Y KCG +A F+ + ++VVSW +I+G ++G G++
Sbjct: 474 VI-RSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDI 532
Query: 326 GVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVV 384
+ ++ + + G+ PN F+ VL+ C+H G+V +G ++F SM F + P EH CVV
Sbjct: 533 ALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVV 592
Query: 385 DLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSG 444
DLL R + +A + P+ + G +L ACR +G E+ +I ++++ ++P ++G
Sbjct: 593 DLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAG 652
Query: 445 HHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
H+V L + +A RWD+V + MR +KK+PG S
Sbjct: 653 HYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWS 689
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 198/428 (46%), Gaps = 37/428 (8%)
Query: 3 KGLQQIERRILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATR 62
+G++ +L +L G TQL +H + +G ++ +++ V A
Sbjct: 141 QGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKD 200
Query: 63 VFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLR 122
+F+ +++ +N++I + + L MR + PD TF + L + +
Sbjct: 201 LFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMR-GDGLRPDQQTFGASLSVSGTMC 259
Query: 123 DFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQ 182
D ++G+ LH Q+ GF ++ ++ +Y C + + +V + + +DV+ W +MI
Sbjct: 260 DLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMIS 319
Query: 183 GYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDAT 242
G ++G + E+AL++F EML+ G +
Sbjct: 320 GLMRLG-------------------------------RAEKALIVFSEMLQSGSDLSSEA 348
Query: 243 LVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEM 302
+ +V+ CA+LG+ D+G +H Y G+ D ++ NSL+ Y KCG+ L +F M
Sbjct: 349 IASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPAL-NSLITMYAKCGHLDKSLVIFERM 407
Query: 303 PMRNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDS-TFVGVLACCAHAGLVDRG 360
R++VSWNA+ISG A N + LFE+M + V DS T V +L C+ AG + G
Sbjct: 408 NERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVG 467
Query: 361 RELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACR 420
+ L + ++ + P +VD+ +CG++ A S+ + + WG L++
Sbjct: 468 K-LIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVS-WGILIAGYG 525
Query: 421 THGDREIA 428
HG +IA
Sbjct: 526 FHGKGDIA 533
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 164/366 (44%), Gaps = 43/366 (11%)
Query: 75 FNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQV 134
FNS I S +Q FS M A + PD FTFPSLLKA ++L+ G S+H QV
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSML-ANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQV 72
Query: 135 TTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGL 194
GF+ + +V LYA + A KVF+EMRERDV+ W MI Y + G +
Sbjct: 73 LVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIV---- 128
Query: 195 ELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLG 254
EA L EM +G +P TL+ +L G
Sbjct: 129 ---------------------------GEACSLVNEMRFQGIKPGPVTLLEMLS-----G 156
Query: 255 AADVGEW--IHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNA 312
++ + +H +A GF DI +V NS+++ YCKC + +F++M R++VSWN
Sbjct: 157 VLEITQLQCLHDFAVIYGFDCDI-AVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNT 215
Query: 313 MISGMAYNG-MGEVGVGLFEDMVRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKF 371
MISG A G M E+ L+ G+ P+ TF L+ ++ GR + VK
Sbjct: 216 MISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGR-MLHCQIVKT 274
Query: 372 QLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIA 431
+ ++ + +CG + ++ ++P + W ++S G E A I
Sbjct: 275 GFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVC-WTVMISGLMRLGRAEKALIV 333
Query: 432 AKELVN 437
E++
Sbjct: 334 FSEMLQ 339
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 170/410 (41%), Gaps = 44/410 (10%)
Query: 14 SLLHGAKTRTQLT---QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNP 70
SLL + +L+ IH L +G I + +++ A + +A +VF
Sbjct: 51 SLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRER 110
Query: 71 NIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSL 130
+++ + ++I S + + L + MR + I P T LL+ S + + Q L
Sbjct: 111 DVVHWTAMIGCYSRAGIVGEACSLVNEMR-FQGIKPGPVT---LLEMLSGVLEITQLQCL 166
Query: 131 HAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGEL 190
H GF V ++ LY C+ +GDA +FD+M +RD++ WN MI GY VG +
Sbjct: 167 HDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNM 226
Query: 191 ETGLELFRRM-GDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPV 249
L+L RM GD G PD T L V
Sbjct: 227 SEILKLLYRMRGD--------------------------------GLRPDQQTFGASLSV 254
Query: 250 CARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVS 309
+ ++G +H GF D+ + +L+ Y KCG +A V +P ++VV
Sbjct: 255 SGTMCDLEMGRMLHCQIVKTGFDVDM-HLKTALITMYLKCGKEEASYRVLETIPNKDVVC 313
Query: 310 WNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMA 368
W MISG+ G E + +F +M++ G + V+A CA G D G +
Sbjct: 314 WTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASV-HGYV 372
Query: 369 VKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSA 418
++ ++ + +CGH+ ++L + M E W A++S
Sbjct: 373 LRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN-ERDLVSWNAIISG 421
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 134/483 (27%), Positives = 237/483 (49%), Gaps = 34/483 (7%)
Query: 1 MSKGLQQIERRILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYA 60
+ +GL+ E + SLL Q+H + L+ GL + + ++ + + +
Sbjct: 445 LQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEES 504
Query: 61 TRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASN 120
++F P + + S+I + ++ LFS M + SPD T ++L S+
Sbjct: 505 YKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLD-DGTSPDESTLAAVLTVCSS 563
Query: 121 LRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLM 180
G+ +H G + + +V +Y+ C + A +V+D + E D + + +
Sbjct: 564 HPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSL 623
Query: 181 IQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDD 240
I GY + G ++ G +LFR+M+ GF D
Sbjct: 624 ISGYSQHGLIQDGF-------------------------------LLFRDMVMSGFTMDS 652
Query: 241 ATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFN 300
+ ++L A + +G +H+Y G + SVG+SL+ Y K G+ F+
Sbjct: 653 FAISSILKAAALSDESSLGAQVHAYITKIGLCTE-PSVGSSLLTMYSKFGSIDDCCKAFS 711
Query: 301 EMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDR 359
++ ++++W A+I+ A +G + ++ M +G P+ TFVGVL+ C+H GLV+
Sbjct: 712 QINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEE 771
Query: 360 GRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSAC 419
+SM + + P+ HY C+VD LGR G +REA I +M ++P A +WG LL+AC
Sbjct: 772 SYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAAC 831
Query: 420 RTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPG 479
+ HG+ E+ ++AAK+ + +EP ++G ++ LSNI AE WDEVE+ R LM+ ++K PG
Sbjct: 832 KIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPG 891
Query: 480 QSA 482
S+
Sbjct: 892 WSS 894
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 118/494 (23%), Positives = 197/494 (39%), Gaps = 86/494 (17%)
Query: 24 QLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPN---PNIILFNSIIK 80
+ +Q+HA + G + + + A IS+ + + + +VF + NI+ N +I
Sbjct: 369 EASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMIT 426
Query: 81 ACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFA 140
+ S S + LF+ M + D F+ SLL S L LG+ +H G
Sbjct: 427 SFSQSKKPGKAIRLFTRMLQ-EGLRTDEFSVCSLL---SVLDCLNLGKQVHGYTLKSGLV 482
Query: 141 RHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRM 200
V + LY+ C + ++ K+F + +D W MI G+ + G L
Sbjct: 483 LDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYL---------- 532
Query: 201 GDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGE 260
EA+ LF EML+ G PD++TL VL VC+ + G+
Sbjct: 533 ---------------------REAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGK 571
Query: 261 WIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYN 320
IH Y G + + +G++LV+ Y KCG+ + V++ +P + VS +++ISG + +
Sbjct: 572 EIHGYTLRAGIDKGM-DLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQH 630
Query: 321 GMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCA-----------HAGLVDRGRELFDSMA 368
G+ + G LF DMV G T + +L A HA + G L +
Sbjct: 631 GLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIG--LCTEPS 688
Query: 369 VKFQLLPKLEHYGCVVDLL------------------------GRCGHVREALDLIRSMP 404
V LL +G + D G+ + +L++
Sbjct: 689 VGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKG 748
Query: 405 MEPTAALWGALLSACRTHGDREIAEIAAKELVN---VEPWNSGHHVLLSNIYAEEMRWDE 461
+P + +LSAC G E + +V +EP N H+V + + R E
Sbjct: 749 FKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENR-HYVCMVDALGRSGRLRE 807
Query: 462 VEKVRVLMREGHIK 475
E + HIK
Sbjct: 808 AES---FINNMHIK 818
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 169/400 (42%), Gaps = 51/400 (12%)
Query: 31 HFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQ 90
H ++ G + + I V + R A +VF S + N+ +N+II + +
Sbjct: 175 HTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGA 234
Query: 91 CFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVV 150
F LF M PD +T+ S+L A ++L + G+ + A+V G A V +V
Sbjct: 235 VFDLFHEMCVGFQ-KPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIV 292
Query: 151 ELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNL 210
+LYA C M +A +VF + V+ W +M+ GY K + + LE
Sbjct: 293 DLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALE--------------- 337
Query: 211 MISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKG 270
+F+EM G E ++ T+ +V+ C R +H++ G
Sbjct: 338 ----------------IFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSG 381
Query: 271 FLRDIVSVGNSLVDFYCKCGNPQAGLSVF---NEMPMRNVVSWNAMISGMAYNGMGEVGV 327
F D SV +L+ Y K G+ VF +++ +N+V N MI+ + + +
Sbjct: 382 FYLD-SSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAI 438
Query: 328 GLFEDMVRGVTPNDS----TFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCV 383
LF M++ D + + VL C ++ G+++ +K L+ L +
Sbjct: 439 RLFTRMLQEGLRTDEFSVCSLLSVLDC------LNLGKQV-HGYTLKSGLVLDLTVGSSL 491
Query: 384 VDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHG 423
L +CG + E+ L + +P + A W +++S +G
Sbjct: 492 FTLYSKCGSLEESYKLFQGIPFKDNAC-WASMISGFNEYG 530
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 116/255 (45%), Gaps = 9/255 (3%)
Query: 173 DVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREML 232
DV + ++ Y G + +LF + VVS N+MIS + + EE+L F +M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 233 EKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNP 292
GFE ++ + +V+ C+ L A E + + G+ V V ++L+D + K
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEV-VESALIDVFSKNLRF 201
Query: 293 QAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRGV-TPNDSTFVGVLACC 351
+ VF + NV WN +I+G N LF +M G P+ T+ VLA C
Sbjct: 202 EDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAAC 261
Query: 352 AHAGLVDRGRELFDSMAVKFQLLPKLEHYGC--VVDLLGRCGHVREALDLIRSMPMEPTA 409
A + G+ + + +K + + C +VDL +CGH+ EA+++ +P P+
Sbjct: 262 ASLEKLRFGK-VVQARVIK---CGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIP-NPSV 316
Query: 410 ALWGALLSACRTHGD 424
W +LS D
Sbjct: 317 VSWTVMLSGYTKSND 331
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 135/459 (29%), Positives = 223/459 (48%), Gaps = 40/459 (8%)
Query: 27 QIHAHFLRHGL---HHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACS 83
Q H FL++GL L + S+C+ A RV + P ++ +F+S +
Sbjct: 157 QFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGE---AIRVLDDLPYCDLSVFSSALSGYL 213
Query: 84 LSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHG 143
F++ + N + + T+ S L+ SNLRD L +H+++ GF
Sbjct: 214 ECGAFKEGLDVLRKTANEDFVWNN-LTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEV 272
Query: 144 PVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDR 203
++ +Y C ++ A +VFD+ +++ + ++ Y + D+
Sbjct: 273 EACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQ---------------DK 317
Query: 204 SVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIH 263
S EEAL LF +M K P++ T +L A L G+ +H
Sbjct: 318 SF----------------EEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLH 361
Query: 264 SYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMG 323
G+ R+ V VGN+LV+ Y K G+ + F+ M R++V+WN MISG +++G+G
Sbjct: 362 GLVLKSGY-RNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLG 420
Query: 324 EVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGC 382
+ F+ M+ G PN TF+GVL C+H G V++G F+ + KF + P ++HY C
Sbjct: 421 REALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTC 480
Query: 383 VVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWN 442
+V LL + G ++A D +R+ P+E W LL+AC + + + A+ + P +
Sbjct: 481 IVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPND 540
Query: 443 SGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
SG +VLLSNI+A+ W+ V KVR LM +KK PG S
Sbjct: 541 SGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVS 579
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 150/365 (41%), Gaps = 35/365 (9%)
Query: 60 ATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAAS 119
A ++F+ P N++ + +++K S + LF M + P+ F + K+ S
Sbjct: 88 ARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCS 147
Query: 120 NLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNL 179
N + G+ H G H VR +V +Y+ C G+A +V D++ D+ V++
Sbjct: 148 NSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSS 207
Query: 180 MIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPD 239
+ GY + G + GL++ R+ + V WN
Sbjct: 208 ALSGYLECGAFKEGLDVLRKTANEDFV-WN------------------------------ 236
Query: 240 DATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVF 299
+ T ++ L + + L ++ +HS GF ++ + G +L++ Y KCG VF
Sbjct: 237 NLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACG-ALINMYGKCGKVLYAQRVF 295
Query: 300 NEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVD 358
++ +N+ ++ + E + LF M + V PN+ TF +L A L+
Sbjct: 296 DDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLK 355
Query: 359 RGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSA 418
+G +L + +K + +V++ + G + +A M W ++S
Sbjct: 356 QG-DLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVT-WNTMISG 413
Query: 419 CRTHG 423
C HG
Sbjct: 414 CSHHG 418
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 22/219 (10%)
Query: 202 DRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEW 261
++ ++ W+ + S + K KK + E+L+ VCA +GE
Sbjct: 8 EQRLLKWDKLASLVPKSKKTPFPIDRLNELLK---------------VCANSSYLRIGES 52
Query: 262 IHSY---ANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMA 318
IH++ N D + NSL++ Y KC +F+ MP RNVVSW AM+ G
Sbjct: 53 IHAHLIVTNQSSRAEDAYQI-NSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQ 111
Query: 319 YNGMGEVGVGLFEDMVRG--VTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPK 376
+G + LF+ M PN+ V C+++G ++ G++ F +K+ L+
Sbjct: 112 NSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQ-FHGCFLKYGLISH 170
Query: 377 LEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGAL 415
+V + C EA+ ++ +P + AL
Sbjct: 171 EFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSAL 209
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 117/289 (40%), Gaps = 46/289 (15%)
Query: 114 LLKAASNLRDFQLGQSLHAQ--VTTLGFARHGPVRVG-VVELYANCERMGDAGKVFDEMR 170
LLK +N ++G+S+HA VT ++ ++ LY C A K+FD M
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 171 ERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFRE 230
ER+V+ W M++GY +G + E L LF+
Sbjct: 97 ERNVVSWCAMMKGY-----QNSGFDF--------------------------EVLKLFKS 125
Query: 231 MLEKG-FEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKC 289
M G P++ V C+ G + G+ H G + V N+LV Y C
Sbjct: 126 MFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEF-VRNTLVYMYSLC 184
Query: 290 GNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRGVTPNDSTFVGVLA 349
+ V +++P ++ +++ +SG G + G+ D++R T N+ L
Sbjct: 185 SGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGL----DVLRK-TANEDFVWNNLT 239
Query: 350 CCAHAGLVDRGREL-----FDSMAVKFQLLPKLEHYGCVVDLLGRCGHV 393
+ L R+L S V+F ++E G ++++ G+CG V
Sbjct: 240 YLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKV 288
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 131/448 (29%), Positives = 221/448 (49%), Gaps = 37/448 (8%)
Query: 23 TQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSP---NPNIILFNSII 79
T Q+H ++ GL S ++ I + ++ + YA VF+ N ++ ++NS++
Sbjct: 255 TMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSML 314
Query: 80 KACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGF 139
++ + L L + D +T LK N + +LG +H+ V G+
Sbjct: 315 SGFLINEENEAALWLL-LQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGY 373
Query: 140 ARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRR 199
E D IV ++++ + VG ++ +LF R
Sbjct: 374 -------------------------------ELDYIVGSILVDLHANVGNIQDAHKLFHR 402
Query: 200 MGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVG 259
+ ++ +++++ +I K A LFRE+++ G + D + +L VC+ L + G
Sbjct: 403 LPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWG 462
Query: 260 EWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAY 319
+ IH KG+ + V+ +LVD Y KCG G+ +F+ M R+VVSW +I G
Sbjct: 463 KQIHGLCIKKGYESEPVT-ATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQ 521
Query: 320 NGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLE 378
NG E F M+ G+ PN TF+G+L+ C H+GL++ R ++M ++ L P LE
Sbjct: 522 NGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLE 581
Query: 379 HYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNV 438
HY CVVDLLG+ G +EA +LI MP+EP +W +LL+AC TH + + + A++L+
Sbjct: 582 HYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKG 641
Query: 439 EPWNSGHHVLLSNIYAEEMRWDEVEKVR 466
P + + LSN YA WD++ KVR
Sbjct: 642 FPDDPSVYTSLSNAYATLGMWDQLSKVR 669
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 180/416 (43%), Gaps = 8/416 (1%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
I AH ++ G+ + I + IS+ + A +VF+ NI+ + +++ +
Sbjct: 26 SIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDG 85
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
+ L+ M ++ + + F + ++LKA + D QLG ++ ++ +
Sbjct: 86 KPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLM 145
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
VV++Y R+ +A F E+ WN +I GYCK G ++ + LF RM +VV
Sbjct: 146 NSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVV 205
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA 266
SWN +IS K AL M +G D L L C+ G +G+ +H
Sbjct: 206 SWNCLISGFVD-KGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCV 264
Query: 267 NDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPM---RNVVSWNAMISGMAYNGMG 323
G ++ ++L+D Y CG+ VF++ + +V WN+M+SG N
Sbjct: 265 VKSGLESSPFAI-SALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEEN 323
Query: 324 EVGVGLFEDMVRGVTPNDS-TFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGC 382
E + L + + DS T G L C + + G ++ + V L +
Sbjct: 324 EAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVG-SI 382
Query: 383 VVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNV 438
+VDL G++++A L +P + A G L+ C G +A +EL+ +
Sbjct: 383 LVDLHANVGNIQDAHKLFHRLPNKDIIAFSG-LIRGCVKSGFNSLAFYLFRELIKL 437
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 148/321 (46%), Gaps = 13/321 (4%)
Query: 115 LKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDV 174
L+ ++ F+ G+S+ A V G +++ + V+ +Y + + DA KVFDEM ER++
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 175 IVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWN-LMISCLAKG----KKEEEALVLFR 229
+ W M+ GY G+ +EL+RRM D + N M S + K + ++++
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 230 EMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKC 289
+ ++ D + +V+ + + G I + ++ K LR + N+L+ YCK
Sbjct: 132 RIGKENLRGDVVLMNSVVDMYVK-----NGRLIEANSSFKEILRPSSTSWNTLISGYCKA 186
Query: 290 GNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRGVTPNDSTFVGVLA 349
G +++F+ MP NVVSWN +ISG G L G+ + L
Sbjct: 187 GLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLK 246
Query: 350 CCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLI--RSMPMEP 407
C+ GL+ G++L VK L ++D+ CG + A D+ + +
Sbjct: 247 ACSFGGLLTMGKQL-HCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNS 305
Query: 408 TAALWGALLSACRTHGDREIA 428
+ A+W ++LS + + E A
Sbjct: 306 SVAVWNSMLSGFLINEENEAA 326
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 133/397 (33%), Positives = 204/397 (51%), Gaps = 41/397 (10%)
Query: 75 FNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQV 134
+NS+I + ++ L+ M + PD FTFP +LKA + Q+G+++H +
Sbjct: 163 WNSLISGYAELGQYEDAMALYFQMAE-DGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDL 221
Query: 135 TTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGL 194
GF V +V +YA C + A VFD + +D + WN M+ GY G L
Sbjct: 222 VKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLL---- 277
Query: 195 ELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLG 254
EAL +FR M++ G EPD + +VL AR+
Sbjct: 278 ---------------------------HEALDIFRLMVQNGIEPDKVAISSVL---ARVL 307
Query: 255 AADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMI 314
+ G +H + +G ++ SV N+L+ Y K G +F++M R+ VSWNA+I
Sbjct: 308 SFKHGRQLHGWVIRRGMEWEL-SVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAII 366
Query: 315 SGMAYNGMGEVGVGLFEDMVRG-VTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQL 373
S + N G+ FE M R P+ TFV VL+ CA+ G+V+ G LF M+ ++ +
Sbjct: 367 SAHSKNSN---GLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGI 423
Query: 374 LPKLEHYGCVVDLLGRCGHVREALDLI-RSMPMEPTAALWGALLSACRTHGDREIAEIAA 432
PK+EHY C+V+L GR G + EA +I + M +E +WGALL AC HG+ +I E+AA
Sbjct: 424 DPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAA 483
Query: 433 KELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLM 469
+ L +EP N + LL IY++ R ++VE+VR +M
Sbjct: 484 QRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMM 520
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/422 (29%), Positives = 207/422 (49%), Gaps = 37/422 (8%)
Query: 62 RVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNL 121
R+ S ++ +NS+I C+ S + F M I D T + A+ NL
Sbjct: 535 RLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNL 594
Query: 122 RDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMI 181
G+ H G +RE D + N +I
Sbjct: 595 GLVLQGRCFH-------------------------------GLAIKSLRELDTQLQNTLI 623
Query: 182 QGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDA 241
Y + ++E+ +++F + D ++ SWN +IS L++ K E LFR + EP++
Sbjct: 624 TMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL---KLEPNEI 680
Query: 242 TLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNE 301
T V +L +LG+ G H + +GF + V +LVD Y CG + G+ VF
Sbjct: 681 TFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPF-VSAALVDMYSSCGMLETGMKVFRN 739
Query: 302 MPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRG--VTPNDSTFVGVLACCAHAGLVDR 359
+ ++ +WN++IS ++GMGE + LF+++ + PN S+F+ +L+ C+H+G +D
Sbjct: 740 SGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDE 799
Query: 360 GRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSAC 419
G + M KF + P EH +VD+LGR G +REA + I + A +WGALLSAC
Sbjct: 800 GLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSAC 859
Query: 420 RTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPG 479
HGD ++ + A+ L +EP N+ +++ L+N Y W+E ++R ++ + +KK+PG
Sbjct: 860 NYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPG 919
Query: 480 QS 481
S
Sbjct: 920 YS 921
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 178/415 (42%), Gaps = 38/415 (9%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
+H L+ GL + ++ + ++ +F+ ++I++NS+I A + +
Sbjct: 108 SVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNG 167
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
+ LF M + + D T A S+L + LH G +
Sbjct: 168 RYIAAVGLFIEMIH-KGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLC 226
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
++ LYA E + A VF M RD++ WN
Sbjct: 227 NALMNLYAKGENLSSAECVFTHMEHRDIVSWN---------------------------- 258
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA 266
+M CLA G ++L F+ M G E D T V+ C+ + +GE +H
Sbjct: 259 --TIMTKCLANGHP-RKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLV 315
Query: 267 NDKGFLRDI-VSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEV 325
G+ + VSVGNS++ Y KCG+ +A +VF E+ R+V+S NA+++G A NGM E
Sbjct: 316 IKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEE 375
Query: 326 GVGLFEDM--VRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPK-LEHYGC 382
G+ M V + P+ +T V + + C GR + V+ ++ + LE
Sbjct: 376 AFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAV-HGYTVRMEMQSRALEVINS 434
Query: 383 VVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVN 437
V+D+ G+CG +A L ++ + W +++SA +G A+ KE+V+
Sbjct: 435 VIDMYGKCGLTTQAELLFKTTTHRDLVS-WNSMISAFSQNGFTHKAKNLFKEVVS 488
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 163/404 (40%), Gaps = 54/404 (13%)
Query: 24 QLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACS 83
+ + +H + GL + + +++ A + A VF H + +I+ +N+I+ C
Sbjct: 206 KCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCL 265
Query: 84 LSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHG 143
+ ++ F M + D TF ++ A S++ + LG+SLH V G++
Sbjct: 266 ANGHPRKSLQYFKSMTGS-GQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEA 324
Query: 144 PVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDR 203
V VG N +I Y K G+ E +F + R
Sbjct: 325 HVSVG-----------------------------NSIISMYSKCGDTEAAETVFEELVCR 355
Query: 204 SVVSWNLMISCLAKGKKEEEALVLFREMLE-KGFEPDDATLVTVLPVCARLGAADVGEWI 262
V+S N +++ A EEA + +M +PD AT+V++ +C L + G +
Sbjct: 356 DVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAV 415
Query: 263 HSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGM 322
H Y + V NS++D Y KCG +F R++VSWN+MIS + NG
Sbjct: 416 HGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGF 475
Query: 323 GEVGVGLFEDMVRGVTPND---STFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEH 379
LF+++V + + ST + +L C + DS+ + L+
Sbjct: 476 THKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSS----------DSLIFGKSVHCWLQK 525
Query: 380 YGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHG 423
G + R + E DL W +++S C + G
Sbjct: 526 LGDLTSAFLRLETMSETRDLTS----------WNSVISGCASSG 559
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 136/312 (43%), Gaps = 40/312 (12%)
Query: 41 NQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRN 100
Q+ I++ + A +VF +PN+ +N +I A S + ++ F LF RN
Sbjct: 616 TQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLF---RN 672
Query: 101 ARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMG 160
+ + P+ TF LL A++ L G H + GF + V +V++Y++C
Sbjct: 673 LK-LEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSC---- 727
Query: 161 DAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKK 220
G LETG+++FR G S+ +WN +IS
Sbjct: 728 ---------------------------GMLETGMKVFRNSGVNSISAWNSVISAHGFHGM 760
Query: 221 EEEALVLFREMLEKG-FEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVG 279
E+A+ LF+E+ EP+ ++ +++L C+ G D G + +K ++ +
Sbjct: 761 GEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHR 820
Query: 280 NSLVDFYCKCGNPQAGLSVFNEM--PMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRGV 337
+VD + G + + P + V W A++S Y+G ++G + E + +
Sbjct: 821 VWIVDMLGRAGKLREAYEFITGIGEPQKAGV-WGALLSACNYHGDTKLGKEVAEVLFE-M 878
Query: 338 TPNDSTFVGVLA 349
P+++++ LA
Sbjct: 879 EPDNASYYISLA 890
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 162/413 (39%), Gaps = 87/413 (21%)
Query: 48 ISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPD 107
IS+ + A VF ++I N+I+ + + F++ F + + M++ I PD
Sbjct: 333 ISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPD 392
Query: 108 YFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFD 167
T S+ +L + G+++H +
Sbjct: 393 IATVVSITSICGDLSFSREGRAVHGYTVRM------------------------------ 422
Query: 168 EMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVL 227
EM+ R + V N +I Y K G LF+ R +VSWN MIS ++ +A L
Sbjct: 423 EMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNL 482
Query: 228 FREMLEKGFEPDDATLVTVLPVCARLGAAD---VGEWIHSYANDKGFLRDIVSVGNSLVD 284
F+E++ + + +L TVL + ++D G+ +H + G D+ S
Sbjct: 483 FKEVVSE-YSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLG---DLTS------- 531
Query: 285 FYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPND-S 342
A L + R++ SWN++ISG A +G + F+ M R G +D
Sbjct: 532 ---------AFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLI 582
Query: 343 TFVGVLACCAHAGLVDRGRELFDSMAVK-----------------------------FQL 373
T +G ++ + GLV +GR F +A+K F L
Sbjct: 583 TLLGTISASGNLGLVLQGR-CFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGL 641
Query: 374 L--PKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGD 424
+ P L + CV+ L + RE L R++ +EP + LLSA G
Sbjct: 642 ISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLEPNEITFVGLLSASTQLGS 694
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 130/452 (28%), Positives = 215/452 (47%), Gaps = 35/452 (7%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
QIHAH +R GL + I +++ + A RVF+ + ++ + +
Sbjct: 205 QIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAG 264
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
+ LF + + D F F +LKA ++L + LG+ +HA V LG
Sbjct: 265 RARDALKLFVDLVT-EGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGL------- 316
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
E +V V ++ Y K E+ F+ + + + V
Sbjct: 317 ------------------------ESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDV 352
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEP-DDATLVTVLPVCARLGAADVGEWIHSY 265
SW+ +IS + + EEA+ F+ + K + T ++ C+ L ++G +H+
Sbjct: 353 SWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHAD 412
Query: 266 ANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEV 325
A + + ++L+ Y KCG VF M ++V+W A ISG AY G
Sbjct: 413 AIKRSLIGSQYG-ESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASE 471
Query: 326 GVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVV 384
+ LFE MV G+ PN TF+ VL C+HAGLV++G+ D+M K+ + P ++HY C++
Sbjct: 472 ALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMI 531
Query: 385 DLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSG 444
D+ R G + EAL +++MP EP A W LS C TH + E+ EIA +EL ++P ++
Sbjct: 532 DIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTA 591
Query: 445 HHVLLSNIYAEEMRWDEVEKVRVLMREGHIKK 476
+VL N+Y +W+E ++ LM E +KK
Sbjct: 592 GYVLPFNLYTWAGKWEEAAEMMKLMNERMLKK 623
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 154/367 (41%), Gaps = 37/367 (10%)
Query: 60 ATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAAS 119
A ++F+ N + ++I A + + LFS M A P + +LLK+
Sbjct: 137 ADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGML-ASGDKPPSSMYTTLLKSLV 195
Query: 120 NLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNL 179
N R G+ +HA V G + + G+V +Y C + A +VFD+M + +
Sbjct: 196 NPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTG 255
Query: 180 MIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPD 239
++ GY + G + +AL LF +++ +G E D
Sbjct: 256 LMVGYTQAG-------------------------------RARDALKLFVDLVTEGVEWD 284
Query: 240 DATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVF 299
VL CA L ++G+ IH+ G L VSVG LVDFY KC + ++ F
Sbjct: 285 SFVFSVVLKACASLEELNLGKQIHACVAKLG-LESEVSVGTPLVDFYIKCSSFESACRAF 343
Query: 300 NEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM--VRGVTPNDSTFVGVLACCAHAGLV 357
E+ N VSW+A+ISG E V F+ + N T+ + C+
Sbjct: 344 QEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADC 403
Query: 358 DRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLS 417
+ G ++ + A+K L+ ++ + +CG + +A ++ SM P W A +S
Sbjct: 404 NIGGQV-HADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMD-NPDIVAWTAFIS 461
Query: 418 ACRTHGD 424
+G+
Sbjct: 462 GHAYYGN 468
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 224/430 (52%), Gaps = 14/430 (3%)
Query: 56 RVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLL 115
R+ A +F+ P NI+ +NS++KA + +LF R D ++ +++
Sbjct: 155 RIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFE-----RMPRRDVVSWTAMV 209
Query: 116 KAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVI 175
+ + L + + G YA R+ +A ++F M ERD
Sbjct: 210 DGLAKNGKVDEARRLFDCMPERNIISWNAMITG----YAQNNRIDEADQLFQVMPERDFA 265
Query: 176 VWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKG 235
WN MI G+ + E+ LF RM +++V+SW MI+ + K+ EEAL +F +ML G
Sbjct: 266 SWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDG 325
Query: 236 -FEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQA 294
+P+ T V++L C+ L G+ IH + ++ + V ++L++ Y K G A
Sbjct: 326 SVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEI-VTSALLNMYSKSGELIA 384
Query: 295 GLSVFNE--MPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACC 351
+F+ + R+++SWN+MI+ A++G G+ + ++ M + G P+ T++ +L C
Sbjct: 385 ARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFAC 444
Query: 352 AHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAAL 411
+HAGLV++G E F + L + EHY C+VDL GR G +++ + I + +
Sbjct: 445 SHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSF 504
Query: 412 WGALLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMRE 471
+GA+LSAC H + IA+ K+++ ++G +VL+SNIYA + +E ++R+ M+E
Sbjct: 505 YGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKE 564
Query: 472 GHIKKVPGQS 481
+KK PG S
Sbjct: 565 KGLKKQPGCS 574
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 175/415 (42%), Gaps = 80/415 (19%)
Query: 107 DYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVF 166
D T+ ++ L D + + L +V + ++ +V Y +++ A +F
Sbjct: 76 DVVTWTHVITGYIKLGDMREARELFDRVDS---RKNVVTWTAMVSGYLRSKQLSIAEMLF 132
Query: 167 DEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALV 226
EM ER+V+ WN MI GY + G ++ LELF M +R++VSWN M+ L + + +EA+
Sbjct: 133 QEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMN 192
Query: 227 LFREMLEKGFEPDDATLVTVLPVCARLGAAD-------------VGEW---IHSYAN--- 267
LF M + D + ++ A+ G D + W I YA
Sbjct: 193 LFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNR 248
Query: 268 ----DKGFL----RDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAY 319
D+ F RD S N+++ + + +F+ MP +NV+SW MI+G
Sbjct: 249 IDEADQLFQVMPERDFAS-WNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVE 307
Query: 320 NGMGEVGVGLFEDMVR--GVTPNDSTFVGVLACCAH-AGLVD------------------ 358
N E + +F M+R V PN T+V +L+ C+ AGLV+
Sbjct: 308 NKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEI 367
Query: 359 ----------------RGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDL--- 399
R++FD+ V L + ++ + GH +EA+++
Sbjct: 368 VTSALLNMYSKSGELIAARKMFDNGLV---CQRDLISWNSMIAVYAHHGHGKEAIEMYNQ 424
Query: 400 IRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVE--PWNSGHHVLLSNI 452
+R +P+A + LL AC G E K+LV E P H+ L ++
Sbjct: 425 MRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDL 479
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 144/320 (45%), Gaps = 53/320 (16%)
Query: 101 ARAISP--DYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCER 158
+RA+S Y+ S+ ++ N R QL + + ++ R + EL +
Sbjct: 3 SRALSRLRSYYKRSSVFPSSDNDRSVQLFNLVRSIYSSSSRPRVPQPEWLIGEL-CKVGK 61
Query: 159 MGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDR-SVVSWNLMISCLAK 217
+ +A K+FD + ERDV+ W +I GY K+G++ ELF R+ R +VV+W M+S +
Sbjct: 62 IAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLR 121
Query: 218 GKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVS 277
K+ A +LF+EM E R++VS
Sbjct: 122 SKQLSIAEMLFQEMPE---------------------------------------RNVVS 142
Query: 278 VGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRGV 337
N+++D Y + G L +F+EMP RN+VSWN+M+ + G + + LFE M R
Sbjct: 143 -WNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPR-- 199
Query: 338 TPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREAL 397
+ ++ ++ A G VD R LFD M + + + ++ + + EA
Sbjct: 200 -RDVVSWTAMVDGLAKNGKVDEARRLFDCMPER-----NIISWNAMITGYAQNNRIDEAD 253
Query: 398 DLIRSMPMEPTAALWGALLS 417
L + MP E A W +++
Sbjct: 254 QLFQVMP-ERDFASWNTMIT 272
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 123/395 (31%), Positives = 202/395 (51%), Gaps = 34/395 (8%)
Query: 60 ATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAAS 119
A R+F+ P N+ + SII + + F LF +M + + TF +L+A++
Sbjct: 177 ARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELS-DCETHTFAVMLRASA 235
Query: 120 NLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNL 179
L +G+ LH LG + V G++++Y+ C + DA F+ M E+ + WN
Sbjct: 236 GLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNN 295
Query: 180 MIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPD 239
+I GY G EEAL L +M + G D
Sbjct: 296 VIAGYALHG-------------------------------YSEEALCLLYDMRDSGVSID 324
Query: 240 DATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVF 299
TL ++ + +L ++ + H+ GF +IV+ +LVDFY K G VF
Sbjct: 325 QFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVA-NTALVDFYSKWGRVDTARYVF 383
Query: 300 NEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRG-VTPNDSTFVGVLACCAHAGLVD 358
+++P +N++SWNA++ G A +G G V LFE M+ V PN TF+ VL+ CA++GL +
Sbjct: 384 DKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSE 443
Query: 359 RGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSA 418
+G E+F SM+ + P+ HY C+++LLGR G + EA+ IR P++ T +W ALL+A
Sbjct: 444 QGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNA 503
Query: 419 CRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIY 453
CR + E+ + A++L + P G++V++ N+Y
Sbjct: 504 CRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMY 538
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 142/359 (39%), Gaps = 57/359 (15%)
Query: 77 SIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTT 136
S I+ L F++ F LF ++ + T+ +L++A L+ + + ++ + +
Sbjct: 92 SQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMS 151
Query: 137 LGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLEL 196
GF + ++ ++ C + DA ++FDE+ ER++ + +I G+ G EL
Sbjct: 152 NGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFEL 211
Query: 197 FRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAA 256
F+ M W + C + T +L A LG+
Sbjct: 212 FKMM-------WEELSDC------------------------ETHTFAVMLRASAGLGSI 240
Query: 257 DVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISG 316
VG+ +H A G + D V L+D Y KCG+ + F MP + V+WN +I+G
Sbjct: 241 YVGKQLHVCALKLGVV-DNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAG 299
Query: 317 MAYNGMGEVGVGLFEDMVRGVTPNDSTFVGV------------LACCAHAGLVDRGRELF 364
A +G E + L DM D + + L AHA L+ G F
Sbjct: 300 YALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNG---F 356
Query: 365 DSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHG 423
+S V L VD + G V A + +P + + W AL+ HG
Sbjct: 357 ESEIVANTAL---------VDFYSKWGRVDTARYVFDKLPRKNIIS-WNALMGGYANHG 405
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 133/461 (28%), Positives = 230/461 (49%), Gaps = 43/461 (9%)
Query: 27 QIHAHFLRHGLHHSNQILAH-FISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLS 85
+H +R G ++ + + I + + V A RVF+ + NI+ +NSI+ +
Sbjct: 247 SVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHN 306
Query: 86 PPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPV 145
+ + +F LM A+ D T SLL+ +S+H + G+ +
Sbjct: 307 QRYDEALEMFHLMVQ-EAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVA 365
Query: 146 RVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSV 205
+++ Y +C + DAG V D M +DV
Sbjct: 366 LSSLIDAYTSCSLVDDAGTVLDSMTYKDV------------------------------- 394
Query: 206 VSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSY 265
VS + MIS LA + +EA+ +F M + P+ T++++L C+ +W H
Sbjct: 395 VSCSTMISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSVSADLRTSKWAHGI 451
Query: 266 ANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEV 325
A + + +SVG S+VD Y KCG + F+++ +N++SW +IS A NG+ +
Sbjct: 452 AIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDK 511
Query: 326 GVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVV 384
+ LF++M +G TPN T++ L+ C H GLV +G +F SM V+ P L+HY C+V
Sbjct: 512 ALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSM-VEEDHKPSLQHYSCIV 570
Query: 385 DLLGRCGHVREALDLIRSMP--MEPTAALWGALLSACRTHGDREI--AEIAAKELVNVEP 440
D+L R G + A++LI+++P ++ A+ WGA+LS CR + I +E+ A E++ +EP
Sbjct: 571 DMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVA-EVLELEP 629
Query: 441 WNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
S ++L S+ +A E W++V +R L++E ++ V G S
Sbjct: 630 LCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYS 670
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 144/337 (42%), Gaps = 64/337 (18%)
Query: 127 GQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCK 186
G+ +H V GF V+ ++ +YA+ + + A K+FDEM ERD
Sbjct: 144 GEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSERD------------- 189
Query: 187 VGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREML-EKGFEPDDATLVT 245
V+SW+++I + K+ L LF+EM+ E EPD T+ +
Sbjct: 190 ------------------VISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTS 231
Query: 246 VLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR 305
VL C + DVG +H ++ +GF V V NSL+D Y K + + VF+E R
Sbjct: 232 VLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCR 291
Query: 306 NVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCA-----------H 353
N+VSWN++++G +N + + +F MV+ V ++ T V +L C H
Sbjct: 292 NIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIH 351
Query: 354 AGLVDRGRE----LFDSMAVKFQLLPKLEHYGCVVDL---------------LGRCGHVR 394
++ RG E S+ + ++ G V+D L G
Sbjct: 352 GVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSD 411
Query: 395 EALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIA 431
EA+ + M P A +LL+AC D ++ A
Sbjct: 412 EAISIFCHMRDTPNAITVISLLNACSVSADLRTSKWA 448
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 180/410 (43%), Gaps = 49/410 (11%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
+IH + +R G + + + + A + A ++F+ ++I ++ +I++ S
Sbjct: 146 KIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSK 204
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGP-V 145
LF M + PD T S+LKA + + D +G+S+H GF V
Sbjct: 205 EPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFV 264
Query: 146 RVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSV 205
++++Y+ + A +VFDE R+++ WN ++ G+
Sbjct: 265 CNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGF--------------------- 303
Query: 206 VSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSY 265
++ +EAL +F M+++ E D+ T+V++L VC + IH
Sbjct: 304 ----------VHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGV 353
Query: 266 ANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEV 325
+G+ + V++ +SL+D Y C +V + M ++VVS + MISG+A+ G +
Sbjct: 354 IIRRGYESNEVAL-SSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDE 412
Query: 326 GVGLFEDMVRGVTPNDSTFVGVL-ACCAHAGLVDRGRELFDSMAVKFQL-LPKLEHYGCV 383
+ +F M TPN T + +L AC A L R + +A++ L + + +
Sbjct: 413 AISIFCHMRD--TPNAITVISLLNACSVSADL--RTSKWAHGIAIRRSLAINDISVGTSI 468
Query: 384 VDLLGRCGHV---REALDLIRSMPMEPTAALWGALLSACRTHG--DREIA 428
VD +CG + R D I E W ++SA +G D+ +A
Sbjct: 469 VDAYAKCGAIEMARRTFDQI----TEKNIISWTVIISAYAINGLPDKALA 514
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 93/188 (49%), Gaps = 6/188 (3%)
Query: 178 NLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFE 237
N + Y K G+L +GL F M R VSWN+++ L EEE L F ++ GFE
Sbjct: 65 NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFE 124
Query: 238 PDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLS 297
P+ +TLV V+ C L GE IH Y GF I SV NS++ Y + +
Sbjct: 125 PNTSTLVLVIHACRSLWFD--GEKIHGYVIRSGFC-GISSVQNSILCMYAD-SDSLSARK 180
Query: 298 VFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR--GVTPNDSTFVGVLACCAHAG 355
+F+EM R+V+SW+ +I + VG+ LF++MV P+ T VL C
Sbjct: 181 LFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVME 240
Query: 356 LVDRGREL 363
+D GR +
Sbjct: 241 DIDVGRSV 248
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 279 GNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGV 337
GNS+ DFY KCG+ +GL F+ M R+ VSWN ++ G+ G E G+ F + V G
Sbjct: 64 GNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGF 123
Query: 338 TPNDSTFVGVLACC 351
PN ST V V+ C
Sbjct: 124 EPNTSTLVLVIHAC 137
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 151/497 (30%), Positives = 243/497 (48%), Gaps = 32/497 (6%)
Query: 1 MSKGLQQIE-------RRILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCAS 53
MSKG++ E + +LL A R I R L+ N + IS+
Sbjct: 176 MSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNAL----ISMYKR 231
Query: 54 LHRVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPS 113
+V A R+F+ + + +N+II + + F L M + T+ +
Sbjct: 232 FGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMY-LSGVEASIVTWNT 290
Query: 114 LLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYAN---CERMG--DAGKVFDE 168
+ + G + A +G R+ VR+G V + C +G GKVF
Sbjct: 291 IAGGC-----LEAGNYIGALNCVVGM-RNCNVRIGSVAMINGLKACSHIGALKWGKVFHC 344
Query: 169 MRERDVI-------VWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKE 221
+ R V N +I Y + +L +F+++ S+ +WN +IS A ++
Sbjct: 345 LVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERS 404
Query: 222 EEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNS 281
EE L +EML GF P+ TL ++LP+ AR+G G+ H Y + +D + + NS
Sbjct: 405 EETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNS 464
Query: 282 LVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPN 340
LVD Y K G A VF+ M R+ V++ ++I G G GEV + F+DM R G+ P+
Sbjct: 465 LVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPD 524
Query: 341 DSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLI 400
T V VL+ C+H+ LV G LF M F + +LEHY C+VDL R G++ +A D+
Sbjct: 525 HVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIF 584
Query: 401 RSMPMEPTAALWGALLSACRTHGDREIAEIAA-KELVNVEPWNSGHHVLLSNIYAEEMRW 459
++P EP++A+ LL AC HG+ I E AA K L+ +P + GH++LL+++YA W
Sbjct: 585 HTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSW 644
Query: 460 DEVEKVRVLMREGHIKK 476
++ V+ L+ + ++K
Sbjct: 645 SKLVTVKTLLSDLGVQK 661
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 118/286 (41%), Gaps = 37/286 (12%)
Query: 73 ILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDY--FTFPSLLKAASNLRDFQLGQSL 130
+LFNS + C + F FSL+R ++ S ++ ++ SLL +F GQ L
Sbjct: 48 VLFNSF-RHCISHGQLYEAFRTFSLLR-YQSGSHEFVLYSSASLLSTCVGFNEFVPGQQL 105
Query: 131 HAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGEL 190
HA + G + +V Y+ F+ + E I N I
Sbjct: 106 HAHCISSGLEFDSVLVPKLVTFYS----------AFNLLDEAQTITENSEIL-------- 147
Query: 191 ETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVC 250
+ WN++I + K+ +E++ +++ M+ KG D+ T +V+ C
Sbjct: 148 -------------HPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKAC 194
Query: 251 ARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSW 310
A L G +H + + R + V N+L+ Y + G +F+ M R+ VSW
Sbjct: 195 AALLDFAYGRVVHG-SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSW 253
Query: 311 NAMISG-MAYNGMGEVGVGLFEDMVRGVTPNDSTFVGVLACCAHAG 355
NA+I+ + +GE L + GV + T+ + C AG
Sbjct: 254 NAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 151/497 (30%), Positives = 243/497 (48%), Gaps = 32/497 (6%)
Query: 1 MSKGLQQIE-------RRILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCAS 53
MSKG++ E + +LL A R I R L+ N + IS+
Sbjct: 176 MSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNAL----ISMYKR 231
Query: 54 LHRVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPS 113
+V A R+F+ + + +N+II + + F L M + T+ +
Sbjct: 232 FGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMY-LSGVEASIVTWNT 290
Query: 114 LLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYAN---CERMG--DAGKVFDE 168
+ + G + A +G R+ VR+G V + C +G GKVF
Sbjct: 291 IAGGC-----LEAGNYIGALNCVVGM-RNCNVRIGSVAMINGLKACSHIGALKWGKVFHC 344
Query: 169 MRERDVI-------VWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKE 221
+ R V N +I Y + +L +F+++ S+ +WN +IS A ++
Sbjct: 345 LVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERS 404
Query: 222 EEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNS 281
EE L +EML GF P+ TL ++LP+ AR+G G+ H Y + +D + + NS
Sbjct: 405 EETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNS 464
Query: 282 LVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPN 340
LVD Y K G A VF+ M R+ V++ ++I G G GEV + F+DM R G+ P+
Sbjct: 465 LVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPD 524
Query: 341 DSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLI 400
T V VL+ C+H+ LV G LF M F + +LEHY C+VDL R G++ +A D+
Sbjct: 525 HVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIF 584
Query: 401 RSMPMEPTAALWGALLSACRTHGDREIAEIAA-KELVNVEPWNSGHHVLLSNIYAEEMRW 459
++P EP++A+ LL AC HG+ I E AA K L+ +P + GH++LL+++YA W
Sbjct: 585 HTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSW 644
Query: 460 DEVEKVRVLMREGHIKK 476
++ V+ L+ + ++K
Sbjct: 645 SKLVTVKTLLSDLGVQK 661
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 118/286 (41%), Gaps = 37/286 (12%)
Query: 73 ILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDY--FTFPSLLKAASNLRDFQLGQSL 130
+LFNS + C + F FSL+R ++ S ++ ++ SLL +F GQ L
Sbjct: 48 VLFNSF-RHCISHGQLYEAFRTFSLLR-YQSGSHEFVLYSSASLLSTCVGFNEFVPGQQL 105
Query: 131 HAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGEL 190
HA + G + +V Y+ F+ + E I N I
Sbjct: 106 HAHCISSGLEFDSVLVPKLVTFYS----------AFNLLDEAQTITENSEIL-------- 147
Query: 191 ETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVC 250
+ WN++I + K+ +E++ +++ M+ KG D+ T +V+ C
Sbjct: 148 -------------HPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKAC 194
Query: 251 ARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSW 310
A L G +H + + R + V N+L+ Y + G +F+ M R+ VSW
Sbjct: 195 AALLDFAYGRVVHG-SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSW 253
Query: 311 NAMISG-MAYNGMGEVGVGLFEDMVRGVTPNDSTFVGVLACCAHAG 355
NA+I+ + +GE L + GV + T+ + C AG
Sbjct: 254 NAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 127/424 (29%), Positives = 218/424 (51%), Gaps = 35/424 (8%)
Query: 60 ATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAAS 119
A+++F P+P++ L+N +I + + +LF+LM++ R P+ +T +L
Sbjct: 160 ASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQH-RGHQPNCYTMVALTSGLI 218
Query: 120 NLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNL 179
+ + S+HA + H V +V +Y+ C + A VF+ + E D++ +
Sbjct: 219 DPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSS 278
Query: 180 MIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPD 239
+I GY + G +EAL LF E+ G +PD
Sbjct: 279 LITGYSRCG-------------------------------NHKEALHLFAELRMSGKKPD 307
Query: 240 DATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVF 299
+ VL CA L + G+ +HSY G DI V ++L+D Y KCG + +S+F
Sbjct: 308 CVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDI-KVCSALIDMYSKCGLLKCAMSLF 366
Query: 300 NEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVD 358
+P +N+VS+N++I G+ +G F +++ G+ P++ TF +L C H+GL++
Sbjct: 367 AGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLN 426
Query: 359 RGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSA 418
+G+E+F+ M +F + P+ EHY +V L+G G + EA + + S+ + + GALLS
Sbjct: 427 KGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSC 486
Query: 419 CRTHGDREIAEIAAKEL-VNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKV 477
C H + +AE+ A+ + N E S + V+LSN+YA RWDEVE++R + E + K+
Sbjct: 487 CEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKL 546
Query: 478 PGQS 481
PG S
Sbjct: 547 PGIS 550
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/421 (22%), Positives = 171/421 (40%), Gaps = 53/421 (12%)
Query: 21 TRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPY-----------------ATRV 63
++TQL I F R N H + L R PY A ++
Sbjct: 3 SQTQLRLIIYEFTRKIQTRLNTQKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKL 62
Query: 64 FNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRD 123
F+ P ++ L+NSII+A + + F LFS + + PD FT+ L + S D
Sbjct: 63 FDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDT-RPDNFTYACLARGFSESFD 121
Query: 124 FQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQG 183
+ + +H G +V+ Y+ + +A K+F + + D+ +WN+MI G
Sbjct: 122 TKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILG 181
Query: 184 YCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATL 243
Y G + G+ LF M R G +P+ T+
Sbjct: 182 YGCCGFWDKGINLFNLMQHR-------------------------------GHQPNCYTM 210
Query: 244 VTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMP 303
V + V +H++ K L VG +LV+ Y +C + SVFN +
Sbjct: 211 VALTSGLIDPSLLLVAWSVHAFCL-KINLDSHSYVGCALVNMYSRCMCIASACSVFNSIS 269
Query: 304 MRNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVDRGRE 362
++V+ +++I+G + G + + LF ++ + G P+ VL CA G+E
Sbjct: 270 EPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKE 329
Query: 363 LFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTH 422
+ S ++ L ++ ++D+ +CG ++ A+ L +P E + +L+ H
Sbjct: 330 V-HSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP-EKNIVSFNSLILGLGLH 387
Query: 423 G 423
G
Sbjct: 388 G 388
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 107/262 (40%), Gaps = 12/262 (4%)
Query: 172 RDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREM 231
RD + + Y +L + +LF +RSV WN +I AK + L LF ++
Sbjct: 38 RDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQI 97
Query: 232 LEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGN 291
L PD+ T + + IH A G D + G+++V Y K G
Sbjct: 98 LRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQI-CGSAIVKAYSKAGL 156
Query: 292 PQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLAC 350
+F +P ++ WN MI G G + G+ LF M RG PN T V +
Sbjct: 157 IVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALT-- 214
Query: 351 CAHAGLVDRGRELFDSMAVKFQLLPKLE---HYGC-VVDLLGRCGHVREALDLIRSMPME 406
+GL+D L F L L+ + GC +V++ RC + A + S+ E
Sbjct: 215 ---SGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSIS-E 270
Query: 407 PTAALWGALLSACRTHGDREIA 428
P +L++ G+ + A
Sbjct: 271 PDLVACSSLITGYSRCGNHKEA 292
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 95/236 (40%), Gaps = 32/236 (13%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
+HA L+ L + + +++ + + A VFN P+++ +S+I S
Sbjct: 228 SVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCG 287
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
++ HLF+ +R + PD +L + + L D G+ +H+ V LG V
Sbjct: 288 NHKEALHLFAELRMS-GKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVC 346
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
++++Y+ C + A +F + E++++ +N +I G G T E
Sbjct: 347 SALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFE----------- 395
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWI 262
F E+LE G PD+ T +L C G + G+ I
Sbjct: 396 --------------------KFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEI 431
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 208 bits (530), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 131/455 (28%), Positives = 219/455 (48%), Gaps = 46/455 (10%)
Query: 28 IHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPP 87
IH + ++ + + IS+ A R A + F P + + FN++ + +
Sbjct: 423 IHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGD 482
Query: 88 FQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRV 147
+ F ++ M+ + PD T +L+ + D+ G ++ Q+ GF V
Sbjct: 483 ANKAFDVYKNMK-LHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAH 541
Query: 148 GVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVS 207
++ ++ C+ + A +FD+ G E +S VS
Sbjct: 542 ALINMFTKCDALAAAIVLFDK-----------------------CGFE-------KSTVS 571
Query: 208 WNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYAN 267
WN+M++ + EEA+ FR+M + F+P+ T V ++ A L A VG +HS
Sbjct: 572 WNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLI 631
Query: 268 DKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGV 327
GF VGNSLVD Y KCG ++ F E+ + +VSWN M+S A +G+ V
Sbjct: 632 QCGFCSQ-TPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAV 690
Query: 328 GLFEDMVRG-VTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDL 386
LF M + P+ +F+ VL+ C HAGLV+ G+ +F+ M + ++ ++EHY C+VDL
Sbjct: 691 SLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDL 750
Query: 387 LGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGHH 446
LG+ G EA++++R M ++ + +WGALL++ R H + ++ A +LV +EP N H
Sbjct: 751 LGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSH- 809
Query: 447 VLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
Y+++ R EV V IKKVP S
Sbjct: 810 ------YSQDRRLGEVNNV------SRIKKVPACS 832
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 184/419 (43%), Gaps = 43/419 (10%)
Query: 12 ILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPN 71
+L +L K L Q+H + GL NQ++ + + R + +F+ +P
Sbjct: 8 LLLMLRECKNFRCLLQVHGSLIVSGLKPHNQLINAY----SLFQRQDLSRVIFDSVRDPG 63
Query: 72 IILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLH 131
++L+NS+I+ + + ++ F M + I PD ++F LKA + DF+ G +H
Sbjct: 64 VVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIH 123
Query: 132 AQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELE 191
+ +G + +VE+Y + A +VFD+M +DV+ WN M+ G
Sbjct: 124 DLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSG-------- 175
Query: 192 TGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCA 251
LA+ AL+LF +M + D +L ++P +
Sbjct: 176 -----------------------LAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVS 212
Query: 252 RLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWN 311
+L +DV +H KGF I + + L+D YC C + A SVF E+ ++ SW
Sbjct: 213 KLEKSDVCRCLHGLVIKKGF---IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWG 269
Query: 312 AMISGMAYNGMGEVGVGLFEDMVRG--VTPNDSTFVGVLACCAHAGLVDRGRELFDSMAV 369
M++ A+NG E + LF D++R V N L A+ G + +G + D AV
Sbjct: 270 TMMAAYAHNGFFEEVLELF-DLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHD-YAV 327
Query: 370 KFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIA 428
+ L+ + ++ + +CG + A L ++ + W A++++ G + A
Sbjct: 328 QQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVS-WSAMIASYEQAGQHDEA 385
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 133/271 (49%), Gaps = 4/271 (1%)
Query: 173 DVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREML 232
DV V ++ Y K GELE +LF + DR VVSW+ MI+ + + +EA+ LFR+M+
Sbjct: 334 DVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMM 393
Query: 233 EKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNP 292
+P+ TL +VL CA + A+ +G+ IH YA K + + +++ Y KCG
Sbjct: 394 RIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYA-IKADIESELETATAVISMYAKCGRF 452
Query: 293 QAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACC 351
L F +P+++ V++NA+ G G ++++M + GV P+ T VG+L C
Sbjct: 453 SPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTC 512
Query: 352 AHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAAL 411
A RG ++ + +K + ++++ +C + A+ L E +
Sbjct: 513 AFCSDYARGSCVYGQI-IKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVS 571
Query: 412 WGALLSACRTHGDREIAEIAAKELVNVEPWN 442
W +++ HG E A +A + VE +
Sbjct: 572 WNIMMNGYLLHGQAEEA-VATFRQMKVEKFQ 601
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 208 bits (529), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 129/457 (28%), Positives = 215/457 (47%), Gaps = 35/457 (7%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
+IH ++ G + + + + + A VF P +++ +NS+IK
Sbjct: 229 EIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKG 288
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
+ C + + M P T S+L A S R+ G+ +H V
Sbjct: 289 DSKSCVEILNRMI-IEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIR---------S 338
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
V ++Y NC +I Y K GE +F +
Sbjct: 339 VVNADIYVNCS----------------------LIDLYFKCGEANLAETVFSKTQKDVAE 376
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA 266
SWN+MIS +A+ ++ +M+ G +PD T +VLP C++L A + G+ IH
Sbjct: 377 SWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSI 436
Query: 267 NDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVG 326
++ D + + ++L+D Y KCGN + +FN +P ++VVSW MIS +G
Sbjct: 437 SESRLETDELLL-SALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREA 495
Query: 327 VGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVD 385
+ F++M + G+ P+ T + VL+ C HAGL+D G + F M K+ + P +EHY C++D
Sbjct: 496 LYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMID 555
Query: 386 LLGRCGHVREALDLIRSMP-MEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSG 444
+LGR G + EA ++I+ P A L L SAC H + + + A+ LV P ++
Sbjct: 556 ILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDAS 615
Query: 445 HHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
+++L N+YA WD +VR+ M+E ++K PG S
Sbjct: 616 TYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCS 652
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 187/421 (44%), Gaps = 42/421 (9%)
Query: 11 RILSLL----HGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVF-N 65
++LSLL + K+ ++ +H L GL + I+V + A VF N
Sbjct: 5 KLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFEN 64
Query: 66 HSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNL-RDF 124
++ ++NS++ S + F +F + N PD FTFP+++KA L R+F
Sbjct: 65 FDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREF 124
Query: 125 QLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGY 184
LG+ +H V G+ V +V +YA ++ +VFDEM ERDV WN +I +
Sbjct: 125 -LGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCF 183
Query: 185 CKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLV 244
+ GE E LELF RM GFEP+ +L
Sbjct: 184 YQSGEAEKALELFGRMES-------------------------------SGFEPNSVSLT 212
Query: 245 TVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPM 304
+ C+RL + G+ IH KGF D V ++LVD Y KC + VF +MP
Sbjct: 213 VAISACSRLLWLERGKEIHRKCVKKGFELDEY-VNSALVDMYGKCDCLEVAREVFQKMPR 271
Query: 305 RNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVDRGREL 363
+++V+WN+MI G G + V + M + G P+ +T +L C+ + + G+
Sbjct: 272 KSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGK-F 330
Query: 364 FDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHG 423
++ + + ++DL +CG A + + S + A W ++S+ + G
Sbjct: 331 IHGYVIRSVVNADIYVNCSLIDLYFKCGEANLA-ETVFSKTQKDVAESWNVMISSYISVG 389
Query: 424 D 424
+
Sbjct: 390 N 390
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 183/410 (44%), Gaps = 39/410 (9%)
Query: 17 HGAKTRTQLTQ-IHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILF 75
+GA R L + IH ++ G + + + + A + + +VF+ P ++ +
Sbjct: 117 YGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASW 176
Query: 76 NSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVT 135
N++I S ++ LF M ++ P+ + + A S L + G+ +H +
Sbjct: 177 NTVISCFYQSGEAEKALELFGRMESS-GFEPNSVSLTVAISACSRLLWLERGKEIHRKCV 235
Query: 136 TLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLE 195
GF V +V++Y C+ C LE E
Sbjct: 236 KKGFELDEYVNSALVDMYGKCD---------------------------C----LEVARE 264
Query: 196 LFRRMGDRSVVSWNLMIS-CLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLG 254
+F++M +S+V+WN MI +AKG + +L R ++E G P TL ++L C+R
Sbjct: 265 VFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIE-GTRPSQTTLTSILMACSRSR 323
Query: 255 AADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMI 314
G++IH Y DI V SL+D Y KCG +VF++ SWN MI
Sbjct: 324 NLLHGKFIHGYVIRSVVNADIY-VNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMI 382
Query: 315 SGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQL 373
S G V +++ MV GV P+ TF VL C+ +++G+++ S++ + +L
Sbjct: 383 SSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSIS-ESRL 441
Query: 374 LPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHG 423
++D+ +CG+ +EA + S+P + + W ++SA +HG
Sbjct: 442 ETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVS-WTVMISAYGSHG 490
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 208 bits (529), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 131/448 (29%), Positives = 218/448 (48%), Gaps = 37/448 (8%)
Query: 36 GLHHSNQIL-AHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHL 94
GL SN + + + + + A V + +++L ++I S +
Sbjct: 195 GLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKA 254
Query: 95 FSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYA 154
F M + P+ +T+ S+L + NL+D G+ +H + GF + ++ +Y
Sbjct: 255 FQSML-VEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYL 313
Query: 155 NCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISC 214
C + D+ L +F+ + + VSW +IS
Sbjct: 314 RCSLVDDS-------------------------------LRVFKCIEYPNQVSWTSLISG 342
Query: 215 LAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRD 274
L + +EE AL+ FR+M+ +P+ TL + L C+ L + G IH GF RD
Sbjct: 343 LVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRD 402
Query: 275 IVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMV 334
+ G+ L+D Y KCG VF+ + +V+S N MI A NG G + LFE M+
Sbjct: 403 KYA-GSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMI 461
Query: 335 R-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHV 393
G+ PND T + VL C ++ LV+ G ELFDS K +++ +HY C+VDLLGR G +
Sbjct: 462 NLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFR-KDKIMLTNDHYACMVDLLGRAGRL 520
Query: 394 REALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIY 453
EA +++ + + P LW LLSAC+ H E+AE ++++ +EP + G +L+SN+Y
Sbjct: 521 EEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLY 579
Query: 454 AEEMRWDEVEKVRVLMREGHIKKVPGQS 481
A +W+ V +++ M++ +KK P S
Sbjct: 580 ASTGKWNRVIEMKSKMKDMKLKKNPAMS 607
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 162/390 (41%), Gaps = 50/390 (12%)
Query: 6 QQIERRILSLLHGAKTRTQLTQIHAHFLRHGL--HHSNQILAHFISVCASLHRVPYATRV 63
Q I+ R +S G KT I AH L+ G S L C + YA +V
Sbjct: 74 QCIDERSIS---GIKT------IQAHMLKSGFPAEISGSKLVDASLKCGD---IDYARQV 121
Query: 64 FNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRD 123
F+ +I+ +NS+I ++ ++ LM + PD +T S+ KA S+L
Sbjct: 122 FDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVL-PDEYTLSSVFKAFSDLSL 180
Query: 124 FQLGQSLHAQVTTLGFARHGP-VRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQ 182
+ Q H LG V +V++Y + +A V D + E+DV++ +I
Sbjct: 181 EKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIV 240
Query: 183 GYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDAT 242
GY + GE + EA+ F+ ML + +P++ T
Sbjct: 241 GYSQKGE-------------------------------DTEAVKAFQSMLVEKVQPNEYT 269
Query: 243 LVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEM 302
+VL C L G+ IH GF + S SL+ Y +C L VF +
Sbjct: 270 YASVLISCGNLKDIGNGKLIHGLMVKSGFESALAS-QTSLLTMYLRCSLVDDSLRVFKCI 328
Query: 303 PMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGR 361
N VSW ++ISG+ NG E+ + F M+R + PN T L C++ + + GR
Sbjct: 329 EYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGR 388
Query: 362 ELFDSMAVKFQLLPKLEHYGCVVDLLGRCG 391
++ + K+ ++DL G+CG
Sbjct: 389 QIH-GIVTKYGFDRDKYAGSGLIDLYGKCG 417
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 123/258 (47%), Gaps = 3/258 (1%)
Query: 180 MIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPD 239
++ K G+++ ++F M +R +V+WN +I+ L K ++ +EA+ ++R M+ PD
Sbjct: 105 LVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPD 164
Query: 240 DATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVF 299
+ TL +V + L + H A G V VG++LVD Y K G + V
Sbjct: 165 EYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVL 224
Query: 300 NEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVD 358
+ + ++VV A+I G + G V F+ M V V PN+ T+ VL C + +
Sbjct: 225 DRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIG 284
Query: 359 RGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSA 418
G+ L + VK L ++ + RC V ++L + + + P W +L+S
Sbjct: 285 NGK-LIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEY-PNQVSWTSLISG 342
Query: 419 CRTHGDREIAEIAAKELV 436
+G E+A I ++++
Sbjct: 343 LVQNGREEMALIEFRKMM 360
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 119/291 (40%), Gaps = 37/291 (12%)
Query: 28 IHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPP 87
IH ++ G + +++ V + RVF PN + + S+I +
Sbjct: 289 IHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGR 348
Query: 88 FQQCFHLF-SLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
+ F +MR++ I P+ FT S L+ SNL F+ G+ +H VT GF R
Sbjct: 349 EEMALIEFRKMMRDS--IKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAG 406
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
G+++LY C A VFD + E DVI N MI Y + G F R
Sbjct: 407 SGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNG--------FGR------- 451
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVG-EWIHSY 265
EAL LF M+ G +P+D T+++VL C + G E S+
Sbjct: 452 ----------------EALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSF 495
Query: 266 ANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISG 316
DK L + +VD + G + + E+ ++V W ++S
Sbjct: 496 RKDKIMLTN--DHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSA 544
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 135/451 (29%), Positives = 214/451 (47%), Gaps = 35/451 (7%)
Query: 28 IHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPP 87
+H + GL ++ I +S+ + + + RV P +++ +N++I +
Sbjct: 367 LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDED 426
Query: 88 FQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDF-QLGQSLHAQVTTLGFARHGPVR 146
+ F MR +S +Y T S+L A D + G+ LHA + + GF
Sbjct: 427 PDKALAAFQTMR-VEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGF------- 478
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
E D V N +I Y K G+L + +LF + +R+++
Sbjct: 479 ------------------------ESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNII 514
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA 266
+WN M++ A EE L L +M G D + L A+L + G+ +H A
Sbjct: 515 TWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLA 574
Query: 267 NDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVG 326
GF D + N+ D Y KCG + + R++ SWN +IS + +G E
Sbjct: 575 VKLGFEHDSF-IFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEV 633
Query: 327 VGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVD 385
F +M+ G+ P TFV +L C+H GLVD+G +D +A F L P +EH CV+D
Sbjct: 634 CATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVID 693
Query: 386 LLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGH 445
LLGR G + EA I MPM+P +W +LL++C+ HG+ + AA+ L +EP +
Sbjct: 694 LLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSV 753
Query: 446 HVLLSNIYAEEMRWDEVEKVRVLMREGHIKK 476
+VL SN++A RW++VE VR M +IKK
Sbjct: 754 YVLSSNMFATTGRWEDVENVRKQMGFKNIKK 784
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 181/411 (44%), Gaps = 40/411 (9%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
QI ++ GL + IS+ S+ V YA +F+ + I +NSI A + +
Sbjct: 164 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 223
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
++ F +FSLMR + T +LL ++ + G+ +H V +GF V
Sbjct: 224 HIEESFRIFSLMRRFHD-EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 282
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
++ +YA R +A VF +M +D+I WN ++ + G RS+
Sbjct: 283 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDG--------------RSLD 328
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA 266
+ L+ S ++ GK V F L F PD + G +H
Sbjct: 329 ALGLLCSMISSGKSVN--YVTFTSALAACFTPD---------------FFEKGRILHGLV 371
Query: 267 NDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVG 326
G + + +GN+LV Y K G V +MP R+VV+WNA+I G A + +
Sbjct: 372 VVSGLFYNQI-IGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKA 430
Query: 327 VGLFEDM-VRGVTPNDSTFVGVLACCAHAG-LVDRGRELFDSM-AVKFQLLPKLEHYGCV 383
+ F+ M V GV+ N T V VL+ C G L++RG+ L + + F+ +++ +
Sbjct: 431 LAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKN--SL 488
Query: 384 VDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHG-DREIAEIAAK 433
+ + +CG + + DL + W A+L+A HG E+ ++ +K
Sbjct: 489 ITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGHGEEVLKLVSK 538
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/443 (21%), Positives = 182/443 (41%), Gaps = 37/443 (8%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
Q+H + GL + + + V + +VF P+ N++ + S++ S
Sbjct: 63 QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKG 122
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
++ ++ MR + + + ++ + L+D LG+ + QV G
Sbjct: 123 EPEEVIDIYKGMR-GEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGL------- 174
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
E + V N +I +G ++ +F +M +R +
Sbjct: 175 ------------------------ESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTI 210
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA 266
SWN + + A+ EE+ +F M E + T+ T+L V + G IH
Sbjct: 211 SWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLV 270
Query: 267 NDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVG 326
GF +V V N+L+ Y G VF +MP ++++SWN++++ +G
Sbjct: 271 VKMGF-DSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDA 329
Query: 327 VGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVD 385
+GL M+ G + N TF LA C ++GR L + V ++ +V
Sbjct: 330 LGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG-NALVS 388
Query: 386 LLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGH 445
+ G+ G + E+ ++ MP A W AL+ D + A +AA + + VE +S +
Sbjct: 389 MYGKIGEMSESRRVLLQMPRRDVVA-WNALIGGYAEDEDPDKA-LAAFQTMRVEGVSSNY 446
Query: 446 HVLLSNIYAEEMRWDEVEKVRVL 468
++S + A + D +E+ + L
Sbjct: 447 ITVVSVLSACLLPGDLLERGKPL 469
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 5/226 (2%)
Query: 203 RSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAA-DVGEW 261
R+ VSWN M+S + + E + FR+M + G +P + +++ C R G+ G
Sbjct: 4 RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQ 63
Query: 262 IHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNG 321
+H + G L D V V +++ Y G VF EMP RNVVSW +++ G + G
Sbjct: 64 VHGFVAKSGLLSD-VYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKG 122
Query: 322 MGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHY 380
E + +++ M GV N+++ V++ C GR++ + VK L KL
Sbjct: 123 EPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQV-VKSGLESKLAVE 181
Query: 381 GCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDRE 426
++ +LG G+V A + M T + W ++ +A +G E
Sbjct: 182 NSLISMLGSMGNVDYANYIFDQMSERDTIS-WNSIAAAYAQNGHIE 226
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 141/362 (38%), Gaps = 45/362 (12%)
Query: 68 PNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRD-FQL 126
P N + +N+++ + + F M + I P F SL+ A F+
Sbjct: 2 PVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDL-GIKPSSFVIASLVTACGRSGSMFRE 60
Query: 127 GQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCK 186
G +H V G V ++ LY + + KVF+EM +R+V+ W ++ GY
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 187 VGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTV 246
GE EE + +++ M +G ++ ++ V
Sbjct: 121 KGE-------------------------------PEEVIDIYKGMRGEGVGCNENSMSLV 149
Query: 247 LPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRN 306
+ C L +G I G L ++V NSL+ GN +F++M R+
Sbjct: 150 ISSCGLLKDESLGRQIIGQVVKSG-LESKLAVENSLISMLGSMGNVDYANYIFDQMSERD 208
Query: 307 VVSWNAMISGMAYNGMGEVGVGLFEDMVRGVTPNDSTFVG-VLACCAHAGLVDRGRELFD 365
+SWN++ + A NG E +F M R +ST V +L+ H GR +
Sbjct: 209 TISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGI-H 267
Query: 366 SMAVKFQLLPKLEHYGCVVDLLGR----CGHVREALDLIRSMPMEPTAALWGALLSACRT 421
+ VK + CV + L R G EA + + MP + + W +L+++
Sbjct: 268 GLVVKM----GFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLIS-WNSLMASFVN 322
Query: 422 HG 423
G
Sbjct: 323 DG 324
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 135/451 (29%), Positives = 214/451 (47%), Gaps = 35/451 (7%)
Query: 28 IHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPP 87
+H + GL ++ I +S+ + + + RV P +++ +N++I +
Sbjct: 384 LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDED 443
Query: 88 FQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDF-QLGQSLHAQVTTLGFARHGPVR 146
+ F MR +S +Y T S+L A D + G+ LHA + + GF
Sbjct: 444 PDKALAAFQTMR-VEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGF------- 495
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
E D V N +I Y K G+L + +LF + +R+++
Sbjct: 496 ------------------------ESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNII 531
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA 266
+WN M++ A EE L L +M G D + L A+L + G+ +H A
Sbjct: 532 TWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLA 591
Query: 267 NDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVG 326
GF D + N+ D Y KCG + + R++ SWN +IS + +G E
Sbjct: 592 VKLGFEHDSF-IFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEV 650
Query: 327 VGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVD 385
F +M+ G+ P TFV +L C+H GLVD+G +D +A F L P +EH CV+D
Sbjct: 651 CATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVID 710
Query: 386 LLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGH 445
LLGR G + EA I MPM+P +W +LL++C+ HG+ + AA+ L +EP +
Sbjct: 711 LLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSV 770
Query: 446 HVLLSNIYAEEMRWDEVEKVRVLMREGHIKK 476
+VL SN++A RW++VE VR M +IKK
Sbjct: 771 YVLSSNMFATTGRWEDVENVRKQMGFKNIKK 801
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 181/411 (44%), Gaps = 40/411 (9%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
QI ++ GL + IS+ S+ V YA +F+ + I +NSI A + +
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
++ F +FSLMR + T +LL ++ + G+ +H V +GF V
Sbjct: 241 HIEESFRIFSLMRRFHD-EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 299
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
++ +YA R +A VF +M +D+I WN ++ + G RS+
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDG--------------RSLD 345
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA 266
+ L+ S ++ GK V F L F PD + G +H
Sbjct: 346 ALGLLCSMISSGKSVN--YVTFTSALAACFTPD---------------FFEKGRILHGLV 388
Query: 267 NDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVG 326
G + + +GN+LV Y K G V +MP R+VV+WNA+I G A + +
Sbjct: 389 VVSGLFYNQI-IGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKA 447
Query: 327 VGLFEDM-VRGVTPNDSTFVGVLACCAHAG-LVDRGRELFDSM-AVKFQLLPKLEHYGCV 383
+ F+ M V GV+ N T V VL+ C G L++RG+ L + + F+ +++ +
Sbjct: 448 LAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKN--SL 505
Query: 384 VDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHG-DREIAEIAAK 433
+ + +CG + + DL + W A+L+A HG E+ ++ +K
Sbjct: 506 ITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGHGEEVLKLVSK 555
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/443 (21%), Positives = 182/443 (41%), Gaps = 37/443 (8%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
Q+H + GL + + + V + +VF P+ N++ + S++ S
Sbjct: 80 QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKG 139
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
++ ++ MR + + + ++ + L+D LG+ + QV G
Sbjct: 140 EPEEVIDIYKGMR-GEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGL------- 191
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
E + V N +I +G ++ +F +M +R +
Sbjct: 192 ------------------------ESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTI 227
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA 266
SWN + + A+ EE+ +F M E + T+ T+L V + G IH
Sbjct: 228 SWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLV 287
Query: 267 NDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVG 326
GF +V V N+L+ Y G VF +MP ++++SWN++++ +G
Sbjct: 288 VKMGF-DSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDA 346
Query: 327 VGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVD 385
+GL M+ G + N TF LA C ++GR L + V ++ +V
Sbjct: 347 LGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG-NALVS 405
Query: 386 LLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGH 445
+ G+ G + E+ ++ MP A W AL+ D + A +AA + + VE +S +
Sbjct: 406 MYGKIGEMSESRRVLLQMPRRDVVA-WNALIGGYAEDEDPDKA-LAAFQTMRVEGVSSNY 463
Query: 446 HVLLSNIYAEEMRWDEVEKVRVL 468
++S + A + D +E+ + L
Sbjct: 464 ITVVSVLSACLLPGDLLERGKPL 486
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 115/245 (46%), Gaps = 5/245 (2%)
Query: 184 YCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATL 243
Y K G ++ LF M R+ VSWN M+S + + E + FR+M + G +P +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 244 VTVLPVCARLGAA-DVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEM 302
+++ C R G+ G +H + G L D V V +++ Y G VF EM
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSD-VYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 303 PMRNVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGR 361
P RNVVSW +++ G + G E + +++ M GV N+++ V++ C GR
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 362 ELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRT 421
++ + VK L KL ++ +LG G+V A + M T + W ++ +A
Sbjct: 181 QIIGQV-VKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTIS-WNSIAAAYAQ 238
Query: 422 HGDRE 426
+G E
Sbjct: 239 NGHIE 243
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 147/374 (39%), Gaps = 45/374 (12%)
Query: 56 RVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLL 115
RV A +F+ P N + +N+++ + + F M + I P F SL+
Sbjct: 7 RVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDL-GIKPSSFVIASLV 65
Query: 116 KAASNLRD-FQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDV 174
A F+ G +H V G V ++ LY + + KVF+EM +R+V
Sbjct: 66 TACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNV 125
Query: 175 IVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEK 234
+ W ++ GY GE EE + +++ M +
Sbjct: 126 VSWTSLMVGYSDKGE-------------------------------PEEVIDIYKGMRGE 154
Query: 235 GFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQA 294
G ++ ++ V+ C L +G I G L ++V NSL+ GN
Sbjct: 155 GVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSG-LESKLAVENSLISMLGSMGNVDY 213
Query: 295 GLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRGVTPNDSTFVG-VLACCAH 353
+F++M R+ +SWN++ + A NG E +F M R +ST V +L+ H
Sbjct: 214 ANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH 273
Query: 354 AGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGR----CGHVREALDLIRSMPMEPTA 409
GR + + VK + CV + L R G EA + + MP +
Sbjct: 274 VDHQKWGRGI-HGLVVKM----GFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLI 328
Query: 410 ALWGALLSACRTHG 423
+ W +L+++ G
Sbjct: 329 S-WNSLMASFVNDG 341
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 192/373 (51%), Gaps = 33/373 (8%)
Query: 110 TFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEM 169
T+ LL+ +++ G+ +HAQ+ +GFA + ++V ++ LYA
Sbjct: 110 TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALS------------- 156
Query: 170 RERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFR 229
G+L+T LFR + R ++ WN MIS + E+E L ++
Sbjct: 157 ------------------GDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYY 198
Query: 230 EMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKC 289
+M + PD T +V C+ L + G+ H+ + +I+ V ++LVD Y KC
Sbjct: 199 DMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNII-VDSALVDMYFKC 257
Query: 290 GNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVL 348
+ G VF+++ RNV++W ++ISG Y+G + FE M G PN TF+ VL
Sbjct: 258 SSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVL 317
Query: 349 ACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPT 408
C H GLVD+G E F SM + + P+ +HY +VD LGR G ++EA + + P +
Sbjct: 318 TACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEH 377
Query: 409 AALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVL 468
+WG+LL ACR HG+ ++ E+AA + + ++P N G++V+ +N YA + KVR
Sbjct: 378 PPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRK 437
Query: 469 MREGHIKKVPGQS 481
M +KK PG S
Sbjct: 438 MENAGVKKDPGYS 450
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 107/273 (39%), Gaps = 36/273 (13%)
Query: 2 SKGLQQIERRILSLLHGAKTRTQLTQ---IHAHFLRHGLHHSNQILAHFISVCASLHRVP 58
S GLQ LL K R + T+ IHA G + + + + A +
Sbjct: 101 SSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQ 160
Query: 59 YATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAA 118
A +F ++I +N++I Q+ ++ MR R I PD +TF S+ +A
Sbjct: 161 TAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNR-IVPDQYTFASVFRAC 219
Query: 119 SNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWN 178
S L + G+ HA + + V +V++Y C D +VFD++ R+VI W
Sbjct: 220 SALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWT 279
Query: 179 LMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEP 238
+I GY G K E L F +M E+G P
Sbjct: 280 SLISGYGYHG-------------------------------KVSEVLKCFEKMKEEGCRP 308
Query: 239 DDATLVTVLPVCARLGAADVGEWIHSYANDKGF 271
+ T + VL C G D G W H Y+ + +
Sbjct: 309 NPVTFLVVLTACNHGGLVDKG-WEHFYSMKRDY 340
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 122/384 (31%), Positives = 198/384 (51%), Gaps = 42/384 (10%)
Query: 107 DYFTFPSLLKAASNLRDFQL-GQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKV 165
D F+ +K +S + L G+ +HA V LGF ++ +V Y++ + A +V
Sbjct: 63 DSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQV 122
Query: 166 FDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEAL 225
FDE E+ +++V W MIS + + EA+
Sbjct: 123 FDETPEK------------------------------QNIVLWTAMISAYTENENSVEAI 152
Query: 226 VLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA-NDKGFLRDIVSVGNSLVD 284
LF+ M + E D + L CA LGA +GE I+S + K L +++ NSL++
Sbjct: 153 ELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLN 212
Query: 285 FYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-------GV 337
Y K G + +F+E ++V ++ +MI G A NG + + LF+ M +
Sbjct: 213 MYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVI 272
Query: 338 TPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREAL 397
TPND TF+GVL C+H+GLV+ G+ F SM + + L P+ H+GC+VDL R GH+++A
Sbjct: 273 TPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAH 332
Query: 398 DLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEM 457
+ I MP++P +W LL AC HG+ E+ E + + ++ + G +V LSNIYA +
Sbjct: 333 EFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKG 392
Query: 458 RWDEVEKVRVLMREGHIKKVPGQS 481
WDE K+R +R+ +++PG+S
Sbjct: 393 MWDEKSKMRDRVRK---RRMPGKS 413
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 139/325 (42%), Gaps = 36/325 (11%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNP-NIILFNSIIKACSLS 85
QIHA + G + QI + +S+ V YA +VF+ +P NI+L+ ++I A + +
Sbjct: 86 QIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTEN 145
Query: 86 PPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLG--FARHG 143
+ LF M A I D L A ++L Q+G+ ++++ A
Sbjct: 146 ENSVEAIELFKRM-EAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDL 204
Query: 144 PVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDR 203
+R ++ +Y A K+FDE +DV + MI GY G+ + LELF++M
Sbjct: 205 TLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKM--- 261
Query: 204 SVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEW-I 262
K + + V+ P+D T + VL C+ G + G+
Sbjct: 262 -------------KTIDQSQDTVI---------TPNDVTFIGVLMACSHSGLVEEGKRHF 299
Query: 263 HSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR-NVVSWNAMISGMAYNG 321
S D G +VD +C+ G+ + N+MP++ N V W ++ + +G
Sbjct: 300 KSMIMDYNLKPREAHFG-CMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHG 358
Query: 322 MGEVGVGLFEDMVRGVTPNDSTFVG 346
E+G E++ R + D VG
Sbjct: 359 NVELG----EEVQRRIFELDRDHVG 379
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 206 bits (523), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 110/300 (36%), Positives = 175/300 (58%), Gaps = 3/300 (1%)
Query: 174 VIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMIS-CLAKGKKEEEALVLFREML 232
+V N +I Y K ++ET L LF ++ + ++SWN +IS C+ G+ V + ML
Sbjct: 382 TLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMML 441
Query: 233 EKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNP 292
G PD T+ ++L C++L ++G+ +H Y F + V +L+D Y KCGN
Sbjct: 442 TGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENF-VCTALIDMYAKCGNE 500
Query: 293 QAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACC 351
SVF + +WN+MISG + +G+ + + +M +G+ P++ TF+GVL+ C
Sbjct: 501 VQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSAC 560
Query: 352 AHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAAL 411
H G VD G+ F +M +F + P L+HY +V LLGR EAL LI M ++P +A+
Sbjct: 561 NHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAV 620
Query: 412 WGALLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMRE 471
WGALLSAC H + E+ E A+++ ++ N G +VL+SN+YA E WD+V +VR +M++
Sbjct: 621 WGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKD 680
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 156/360 (43%), Gaps = 46/360 (12%)
Query: 75 FNSIIKACSLSPPFQQCFHLF-SLMRNARAISPDYFTFPSLLKAAS-NLRDFQLG-QSLH 131
F+S++K+C +F L+R++ ++P++FT L+A + + F+L + +
Sbjct: 16 FHSLLKSCIHGEISSSPITIFRDLLRSS--LTPNHFTMSIFLQATTTSFNSFKLQVEQVQ 73
Query: 132 AQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELE 191
+T G R V+ ++ LY K G +
Sbjct: 74 THLTKSGLDRFVYVKTSLLNLYL-------------------------------KKGCVT 102
Query: 192 TGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCA 251
+ LF M +R V WN +I ++ E +A LF ML++GF P TLV +LP C
Sbjct: 103 SAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCG 162
Query: 252 RLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWN 311
+ G G +H A G D V N+L+ FY KC + +F EM ++ VSWN
Sbjct: 163 QCGFVSQGRSVHGVAAKSGLELD-SQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWN 221
Query: 312 AMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVK 370
MI + +G+ E + +F++M + V + T + +L+ AH E + VK
Sbjct: 222 TMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLS--AHV-----SHEPLHCLVVK 274
Query: 371 FQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEI 430
++ + +V RCG + A L S + L +++S GD +IA +
Sbjct: 275 CGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGL-TSIVSCYAEKGDMDIAVV 333
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 95/252 (37%), Gaps = 34/252 (13%)
Query: 12 ILSLLHGAKTRTQL---TQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSP 68
++ +LHG K + + +H + ++ GL ++ I++ + V +F
Sbjct: 350 LVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQ 409
Query: 69 NPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQ 128
+I +NS+I C S F +F M + PD T SLL S L LG+
Sbjct: 410 ETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGK 469
Query: 129 SLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVG 188
LH F V ++++YA C A VF ++ WN MI GY G
Sbjct: 470 ELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSG 529
Query: 189 ELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLP 248
+ AL + EM EKG +PD+ T + VL
Sbjct: 530 -------------------------------LQHRALSCYLEMREKGLKPDEITFLGVLS 558
Query: 249 VCARLGAADVGE 260
C G D G+
Sbjct: 559 ACNHGGFVDEGK 570
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 132/424 (31%), Positives = 215/424 (50%), Gaps = 35/424 (8%)
Query: 60 ATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAAS 119
A VF+ N + + ++I C + ++ LF M+ + P+ T S+L A
Sbjct: 204 AFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQREN-LRPNRVTLLSVLPACV 262
Query: 120 NLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNL 179
L G SL ++ F RHG +A+ ER+ A
Sbjct: 263 EL---NYGSSLVKEIHGFSF-RHG--------CHAD-ERLTAA----------------- 292
Query: 180 MIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPD 239
+ YC+ G + LF R VV W+ MIS A+ E + L +M ++G E +
Sbjct: 293 FMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEAN 352
Query: 240 DATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVF 299
TL+ ++ C +HS GF+ I+ +GN+L+D Y KCG+ A VF
Sbjct: 353 SVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHIL-LGNALIDMYAKCGSLSAAREVF 411
Query: 300 NEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRGVTP-NDSTFVGVLACCAHAGLVD 358
E+ +++VSW++MI+ +G G + +F+ M++G +D F+ +L+ C HAGLV+
Sbjct: 412 YELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVE 471
Query: 359 RGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSA 418
+ +F + A K+ + LEHY C ++LLGR G + +A ++ +MPM+P+A +W +LLSA
Sbjct: 472 EAQTIF-TQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSA 530
Query: 419 CRTHGDREIA-EIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKV 477
C THG ++A +I A EL+ EP N ++VLLS I+ E + E+VR +M+ + K
Sbjct: 531 CETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKC 590
Query: 478 PGQS 481
G S
Sbjct: 591 YGFS 594
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 165/409 (40%), Gaps = 55/409 (13%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
Q+H L+ G + IS+ A R +VF+ + + + + SII +C
Sbjct: 68 QLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDG 127
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
+ L M YF GF P
Sbjct: 128 LLYEAMKLIKEM---------YF---------------------------YGFI---PKS 148
Query: 147 VGVVELYANCERMGDAGKV---------FDEMRERDVIVWNLMIQGYCKVGELETGLELF 197
V L A C RMG + KV DE + V++ ++ Y K + +F
Sbjct: 149 ELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVF 208
Query: 198 RRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARL--GA 255
+M ++ VSW MIS + E + LFR M + P+ TL++VLP C L G+
Sbjct: 209 DQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGS 268
Query: 256 ADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMIS 315
+ V E IH ++ G D + + + YC+CGN +F +R+VV W++MIS
Sbjct: 269 SLVKE-IHGFSFRHGCHAD-ERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMIS 326
Query: 316 GMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLL 374
G A G + L M + G+ N T + +++ C ++ L+ + S +K +
Sbjct: 327 GYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTV-HSQILKCGFM 385
Query: 375 PKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHG 423
+ ++D+ +CG + A ++ + E W ++++A HG
Sbjct: 386 SHILLGNALIDMYAKCGSLSAAREVFYELT-EKDLVSWSSMINAYGLHG 433
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 145/350 (41%), Gaps = 55/350 (15%)
Query: 88 FQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRD-FQLGQSLHAQVTTLGFARHGPVR 146
+ + L+ L ++ + PS++KA + ++ F LG LH G V
Sbjct: 26 YDEALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVS 85
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
++ +YA R KVFDEM RD + + +I C+ G L
Sbjct: 86 NSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLY--------------- 130
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAAD-VGEWIHSY 265
EA+ L +EM GF P + ++L +C R+G++ V H+
Sbjct: 131 ----------------EAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHAL 174
Query: 266 ANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEV 325
+++ V + +LVD Y K + A VF++M ++N VSW AMISG N E+
Sbjct: 175 VLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEM 234
Query: 326 GVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSM-AVKFQLLPKLEHYGCV 383
GV LF M R + PN T + VL C ++ G L + F+ +GC
Sbjct: 235 GVDLFRAMQRENLRPNRVTLLSVLPACVE---LNYGSSLVKEIHGFSFR-------HGCH 284
Query: 384 VD---------LLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGD 424
D + RCG+V + L + + +W +++S GD
Sbjct: 285 ADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDV-VMWSSMISGYAETGD 333
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 136/318 (42%), Gaps = 34/318 (10%)
Query: 25 LTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSL 84
+ +IH RHG H ++ A F+++ V + +F S ++++++S+I +
Sbjct: 271 VKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAE 330
Query: 85 SPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGP 144
+ + +L + MR I + T +++ A +N ++H+Q+ GF H
Sbjct: 331 TGDCSEVMNLLNQMRK-EGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHIL 389
Query: 145 VRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRS 204
+ ++++YA C + A +VF E+ E+D++ W+ MI Y GL G S
Sbjct: 390 LGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAY--------GLH-----GHGS 436
Query: 205 VVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHS 264
EAL +F+ M++ G E DD + +L C G + + I +
Sbjct: 437 ------------------EALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFT 478
Query: 265 YANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR-NVVSWNAMISGMAYNGMG 323
A K + + ++ + G V MPM+ + W++++S +G
Sbjct: 479 QAG-KYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRL 537
Query: 324 EVGVGLFEDMVRGVTPND 341
+V + + + P++
Sbjct: 538 DVAGKIIANELMKSEPDN 555
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 130/444 (29%), Positives = 221/444 (49%), Gaps = 38/444 (8%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
Q+H ++ G + +++ +S A +VF +++ +N++I + + +
Sbjct: 309 QVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAK 368
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
+ ++ M + + PD FTF SLL + +L ++ Q A + G + +
Sbjct: 369 LGKSAMSVYKRM-HIIGVKPDEFTFGSLLATSLDLDVLEMVQ---ACIIKFGLSSKIEIS 424
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
++ Y+ ++ A +F+ +++I WN +I G+ G GLE F
Sbjct: 425 NALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERF--------- 475
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA 266
SCL E E +L PD TL T+L +C + +G H+Y
Sbjct: 476 ------SCLL----ESEVRIL----------PDAYTLSTLLSICVSTSSLMLGSQTHAYV 515
Query: 267 NDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVG 326
G ++ + +GN+L++ Y +CG Q L VFN+M ++VVSWN++IS + +G GE
Sbjct: 516 LRHGQFKETL-IGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENA 574
Query: 327 VGLFEDMVR--GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVV 384
V ++ M V P+ +TF VL+ C+HAGLV+ G E+F+SM ++ ++H+ C+V
Sbjct: 575 VNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLV 634
Query: 385 DLLGRCGHVREALDLIR--SMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWN 442
DLLGR GH+ EA L++ + +W AL SAC HGD ++ ++ AK L+ E +
Sbjct: 635 DLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDD 694
Query: 443 SGHHVLLSNIYAEEMRWDEVEKVR 466
+V LSNIYA W E E+ R
Sbjct: 695 PSVYVQLSNIYAGAGMWKEAEETR 718
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 134/292 (45%), Gaps = 7/292 (2%)
Query: 69 NPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQ 128
+ ++ N + + S + LF+ + + PD ++ + A +LRD G
Sbjct: 18 STTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGG 77
Query: 129 SLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVG 188
+H G H V ++ LY + K FDE+ E DV W ++ K+G
Sbjct: 78 QVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLG 137
Query: 189 ELETGLELFRRMGDRSVVS-WNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVL 247
++E E+F +M +R V+ WN MI+ + E ++ LFREM + G D T+L
Sbjct: 138 DIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATIL 197
Query: 248 PVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNE--MPMR 305
+C G+ D G+ +HS GF SV N+L+ Y C VF E + +R
Sbjct: 198 SMC-DYGSLDFGKQVHSLVIKAGFFI-ASSVVNALITMYFNCQVVVDACLVFEETDVAVR 255
Query: 306 NVVSWNAMISGMAYNGMGEVGVGLFEDMVRG-VTPNDSTFVGVLACCAHAGL 356
+ V++N +I G+A E + +F M+ + P D TFV V+ C+ A +
Sbjct: 256 DQVTFNVVIDGLAGFKRDE-SLLVFRKMLEASLRPTDLTFVSVMGSCSCAAM 306
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 174/408 (42%), Gaps = 49/408 (12%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNP--NIILFNSIIKACSL 84
Q+H+ ++ G ++ ++ I++ + V A VF + + + FN +I +
Sbjct: 210 QVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA- 268
Query: 85 SPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGP 144
+ +F M A ++ P TF S++ + S +G +H G+ ++
Sbjct: 269 GFKRDESLLVFRKMLEA-SLRPTDLTFVSVMGSCSCA---AMGHQVHGLAIKTGYEKYTL 324
Query: 145 VRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRS 204
V + +Y++ E G A KVF+ + E+D+
Sbjct: 325 VSNATMTMYSSFEDFGAAHKVFESLEEKDL------------------------------ 354
Query: 205 VVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHS 264
V+WN MIS + K + A+ +++ M G +PD+ T ++L L DV E + +
Sbjct: 355 -VTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDL---DVLEMVQA 410
Query: 265 YANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGE 324
G L + + N+L+ Y K G + +F +N++SWNA+ISG +NG
Sbjct: 411 CIIKFG-LSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPF 469
Query: 325 VGVG----LFEDMVRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHY 380
G+ L E VR + P+ T +L+ C + G + + Q L
Sbjct: 470 EGLERFSCLLESEVR-ILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIG- 527
Query: 381 GCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIA 428
++++ +CG ++ +L++ M E W +L+SA HG+ E A
Sbjct: 528 NALINMYSQCGTIQNSLEVFNQMS-EKDVVSWNSLISAYSRHGEGENA 574
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 149/364 (40%), Gaps = 36/364 (9%)
Query: 4 GLQQIERRILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRV 63
G++ E SLL + L + A ++ GL +I IS + ++ A +
Sbjct: 384 GVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLL 443
Query: 64 FNHSPNPNIILFNSIIKACSLSP-PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLR 122
F S N+I +N+II + PF+ L+ + I PD +T +LL +
Sbjct: 444 FERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTS 503
Query: 123 DFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQ 182
LG HA V G + + ++ +Y+ C + ++ +VF++M E+DV+ WN +I
Sbjct: 504 SLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLIS 563
Query: 183 GYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDAT 242
Y + GE E + ++ M D V PD AT
Sbjct: 564 AYSRHGEGENAVNTYKTMQDEGKVI------------------------------PDAAT 593
Query: 243 LVTVLPVCARLGAADVG-EWIHSYANDKGFLRDIVSVGNSLVDFYCKCGN---PQAGLSV 298
VL C+ G + G E +S G +R++ + LVD + G+ ++ + +
Sbjct: 594 FSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHF-SCLVDLLGRAGHLDEAESLVKI 652
Query: 299 FNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRGVTPNDSTFVGVLACCAHAGLVD 358
+ V W A+ S A +G ++G + + ++ + S +V + A AG+
Sbjct: 653 SEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWK 712
Query: 359 RGRE 362
E
Sbjct: 713 EAEE 716
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 139/493 (28%), Positives = 236/493 (47%), Gaps = 41/493 (8%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
Q+H + +HG + ++ + + + A +VF+ P+P++I +NS++ S
Sbjct: 76 QLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSG 135
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
FQ+ LF L + + P+ F+F + L A + L LG +H+++ LG + G V
Sbjct: 136 RFQEGICLF-LELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEK-GNVV 193
Query: 147 VG--VVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRS 204
VG ++++Y C M DA VF M E+D + WN ++ + G+LE GL F +M +
Sbjct: 194 VGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPD 253
Query: 205 VV-------------------------------SWNLMISCLAKGKKEEEALVLFREMLE 233
V SWN +++ +K EA F +M
Sbjct: 254 TVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHS 313
Query: 234 KGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQ 293
G D+ +L VL A L G IH+ A+ G L V V ++L+D Y KCG +
Sbjct: 314 SGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLG-LDSRVVVASALIDMYSKCGMLK 372
Query: 294 AGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMV--RGVTPNDSTFVGVLACC 351
+F MP +N++ WN MISG A NG + LF + R + P+ TF+ +LA C
Sbjct: 373 HAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVC 432
Query: 352 AHAGL-VDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAA 410
+H + ++ F+ M ++++ P +EH ++ +G+ G V +A +I+
Sbjct: 433 SHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGV 492
Query: 411 LWGALLSACRTHGDREIAEIAAKELVNVEPWNSGH--HVLLSNIYAEEMRWDEVEKVRVL 468
W ALL AC D + A+ A +++ + + ++++SN+YA RW EV ++R +
Sbjct: 493 AWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKI 552
Query: 469 MREGHIKKVPGQS 481
MRE + K G S
Sbjct: 553 MRESGVLKEVGSS 565
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 121/313 (38%), Gaps = 71/313 (22%)
Query: 106 PDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKV 165
PD LL+ + N L + LH VT GF + + ++ Y + + DA KV
Sbjct: 53 PDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKV 112
Query: 166 FDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEAL 225
FDEM + DVI WN ++ GY + G +E +
Sbjct: 113 FDEMPDPDVISWNSLVSGYVQSGRF-------------------------------QEGI 141
Query: 226 VLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDF 285
LF E+ P++ + L CARL + +G IHS G + V VGN L+D
Sbjct: 142 CLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDM 201
Query: 286 YCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRGVTPNDSTFV 345
Y KCG + VF M ++ VSWNA+++ + NG E+G+ F M PN
Sbjct: 202 YGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQM-----PN----- 251
Query: 346 GVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPM 405
P Y ++D + G A ++ MP
Sbjct: 252 -----------------------------PDTVTYNELIDAFVKSGDFNNAFQVLSDMP- 281
Query: 406 EPTAALWGALLSA 418
P ++ W +L+
Sbjct: 282 NPNSSSWNTILTG 294
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 105/201 (52%), Gaps = 5/201 (2%)
Query: 230 EMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKC 289
E++ G +PD + LV +L V G + +H Y GF+ + + NSL+ FY
Sbjct: 45 ELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSN-TRLSNSLMRFYKTS 103
Query: 290 GNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRG-VTPNDSTFVGVL 348
+ + VF+EMP +V+SWN+++SG +G + G+ LF ++ R V PN+ +F L
Sbjct: 104 DSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAAL 163
Query: 349 ACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYG-CVVDLLGRCGHVREALDLIRSMPMEP 407
A CA L G S VK L G C++D+ G+CG + +A+ + + M +
Sbjct: 164 AACARLHLSPLG-ACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKD 222
Query: 408 TAALWGALLSACRTHGDREIA 428
T + W A++++C +G E+
Sbjct: 223 TVS-WNAIVASCSRNGKLELG 242
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 139/527 (26%), Positives = 232/527 (44%), Gaps = 73/527 (13%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
+HA+ ++ L S + + + + + ++ + RVF+ P N + + +II +
Sbjct: 129 SLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAG 188
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
+++ FS M + +S D +TF LKA + LR + G+++H V GF V
Sbjct: 189 RYKEGLTYFSEMSRSEELS-DTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVA 247
Query: 147 VGVVELYANC----------------------------ERMGD---AGKVFDEMRERDV- 174
+ +Y C +R+G A + F +MR V
Sbjct: 248 NSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVP 307
Query: 175 ------------------IVW--------------------NLMIQGYCKVGELETGLEL 196
+VW N M++ Y G L + L
Sbjct: 308 PNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVL 367
Query: 197 FRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAA 256
F+ M R ++SW+ +I + EE F M + G +P D L ++L V +
Sbjct: 368 FQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVI 427
Query: 257 DVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISG 316
+ G +H+ A G L +V +SL++ Y KCG+ + +F E ++VS AMI+G
Sbjct: 428 EGGRQVHALALCFG-LEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMING 486
Query: 317 MAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLP 375
A +G + + LFE ++ G P+ TF+ VL C H+G +D G F+ M + + P
Sbjct: 487 YAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRP 546
Query: 376 KLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKEL 435
EHYGC+VDLL R G + +A +I M + +W LL AC+ GD E AA+ +
Sbjct: 547 AKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERI 606
Query: 436 VNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQSA 482
+ ++P + V L+NIY+ +E VR M+ + K PG S+
Sbjct: 607 LELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSS 653
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 148/349 (42%), Gaps = 41/349 (11%)
Query: 60 ATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNA-RAISPDYFTFPSLLKAA 118
A +VF+ P+ +I+ + SIIK + + LFS MR A+SPD +LKA
Sbjct: 59 ARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKAC 118
Query: 119 SNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWN 178
+ G+SLHA V ++++Y ++ + +VF EM R+ + W
Sbjct: 119 GQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWT 178
Query: 179 LMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEP 238
+I G G + GL F M + EE
Sbjct: 179 AIITGLVHAGRYKEGLTYFSEMS------------------RSEEL-------------S 207
Query: 239 DDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSV 298
D T L CA L G+ IH++ +GF+ + V NSL Y +CG Q GL +
Sbjct: 208 DTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLC-VANSLATMYTECGEMQDGLCL 266
Query: 299 FNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR----GVTPNDSTFVGVLACCAHA 354
F M R+VVSW ++I +AY +G+ V E ++ V PN+ TF + + CA
Sbjct: 267 FENMSERDVVSWTSLI--VAYKRIGQ-EVKAVETFIKMRNSQVPPNEQTFASMFSACASL 323
Query: 355 GLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSM 403
+ G +L ++ + L L ++ + CG++ A L + M
Sbjct: 324 SRLVWGEQLHCNV-LSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGM 371
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 115/249 (46%), Gaps = 6/249 (2%)
Query: 178 NLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREM--LEKG 235
N ++ G L ++F +M +VSW +I +EAL+LF M ++
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 236 FEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAG 295
PD + L VL C + GE +H+YA L V VG+SL+D Y + G
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSS-VYVGSSLLDMYKRVGKIDKS 162
Query: 296 LSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRGVTPNDS-TFVGVLACCAHA 354
VF+EMP RN V+W A+I+G+ + G + G+ F +M R +D+ TF L CA
Sbjct: 163 CRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGL 222
Query: 355 GLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGA 414
V G+ + + V+ + L + + CG +++ L L +M E W +
Sbjct: 223 RQVKYGKAIHTHVIVR-GFVTTLCVANSLATMYTECGEMQDGLCLFENMS-ERDVVSWTS 280
Query: 415 LLSACRTHG 423
L+ A + G
Sbjct: 281 LIVAYKRIG 289
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 195 bits (496), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 139/480 (28%), Positives = 229/480 (47%), Gaps = 49/480 (10%)
Query: 12 ILSLLHGAKTRTQLTQIHAHFLRHGLHHS----NQILAHFISVCASLHRVPYATRVFNHS 67
ILSL ++ QIH+ ++ G S N ++ ++ AS A+RVF
Sbjct: 331 ILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVE---ASRVFGAM 387
Query: 68 PNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLG 127
+PN++ + ++I Q CF L M R + P+ T +L+A S LR +
Sbjct: 388 VSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVK-REVEPNVVTLSGVLRACSKLRHVRRV 446
Query: 128 QSLHAQVTTLGFARH--GPVRVG--VVELYANCERMGDAGKVFDEMRERDVIVWNLMIQG 183
+HA + RH G + VG +V+ YA+ ++ A V M+ RD I + ++
Sbjct: 447 LEIHAYL----LRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTR 502
Query: 184 YCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATL 243
+ ++G K E AL + M G D +L
Sbjct: 503 FNELG-------------------------------KHEMALSVINYMYGDGIRMDQLSL 531
Query: 244 VTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMP 303
+ A LGA + G+ +H Y+ GF SV NSLVD Y KCG+ + VF E+
Sbjct: 532 PGFISASANLGALETGKHLHCYSVKSGF-SGAASVLNSLVDMYSKCGSLEDAKKVFEEIA 590
Query: 304 MRNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVDRGRE 362
+VVSWN ++SG+A NG + FE+M ++ P+ TF+ +L+ C++ L D G E
Sbjct: 591 TPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLE 650
Query: 363 LFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTH 422
F M + + P++EHY +V +LGR G + EA ++ +M ++P A ++ LL ACR
Sbjct: 651 YFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYR 710
Query: 423 GDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQSA 482
G+ + E A + + + P + ++LL+++Y E + + +K R LM E + K G+S
Sbjct: 711 GNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKST 770
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 181/420 (43%), Gaps = 37/420 (8%)
Query: 5 LQQIERRILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVF 64
LQ+ RILS +R L IH ++ GL + + + +S+ + A ++F
Sbjct: 23 LQKSCIRILSFCESNSSRIGL-HIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLF 81
Query: 65 NHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDF 124
+ + + + +I A + S F LF M A P+ FTF S++++ + LRD
Sbjct: 82 DEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMM-ASGTHPNEFTFSSVVRSCAGLRDI 140
Query: 125 QLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGY 184
G +H V GF + V + +LY+ C + +A ++F ++ D I W
Sbjct: 141 SYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISW------- 193
Query: 185 CKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLV 244
+MIS L +K EAL + EM++ G P++ T V
Sbjct: 194 ------------------------TMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFV 229
Query: 245 TVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPM 304
+L + LG + G+ IHS +G ++V + SLVDFY + + + V N
Sbjct: 230 KLLGASSFLG-LEFGKTIHSNIIVRGIPLNVV-LKTSLVDFYSQFSKMEDAVRVLNSSGE 287
Query: 305 RNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGREL 363
++V W +++SG N + VG F +M G+ PN+ T+ +L+ C+ +D G+++
Sbjct: 288 QDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQI 347
Query: 364 FDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHG 423
S +K + +VD+ +C + + P W L+ HG
Sbjct: 348 -HSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHG 406
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 179/404 (44%), Gaps = 38/404 (9%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
++H ++ G ++ + + + + + A +F+ N + I + +I + +
Sbjct: 145 RVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGAR 204
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
+++ +S M A + P+ FTF LL A+S L + G+++H+ + G + ++
Sbjct: 205 KWREALQFYSEMVKA-GVPPNEFTFVKLLGASSFL-GLEFGKTIHSNIIVRGIPLNVVLK 262
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
+V+ Y+ +M DA +V + G++ V
Sbjct: 263 TSLVDFYSQFSKMEDAVRVLNSS-------------------------------GEQDVF 291
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA 266
W ++S + + +EA+ F EM G +P++ T +L +C+ + + D G+ IHS
Sbjct: 292 LWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQT 351
Query: 267 NDKGFLRDIVSVGNSLVDFYCKCGNPQAGLS-VFNEMPMRNVVSWNAMISGMAYNGMGEV 325
GF D VGN+LVD Y KC + S VF M NVVSW +I G+ +G +
Sbjct: 352 IKVGF-EDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQD 410
Query: 326 GVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVV 384
GL +MV R V PN T GVL C+ V R E+ + ++ + ++ +V
Sbjct: 411 CFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEI-HAYLLRRHVDGEMVVGNSLV 469
Query: 385 DLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIA 428
D V A ++IRSM + +L++ G E+A
Sbjct: 470 DAYASSRKVDYAWNVIRSMKRRDNIT-YTSLVTRFNELGKHEMA 512
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 138/301 (45%), Gaps = 21/301 (6%)
Query: 122 RDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMI 181
R +LG + + L F R+G L+ +C + F + D+ N ++
Sbjct: 16 RTNELGNLQKSCIRILSFCESNSSRIG---LHIHCPVIK-----FGLLENLDLC--NNLL 65
Query: 182 QGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDA 241
Y K + +LF M R+V +W +MIS K ++ AL LF EM+ G P++
Sbjct: 66 SLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEF 125
Query: 242 TLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNE 301
T +V+ CA L G +H GF + V VG+SL D Y KCG + +F+
Sbjct: 126 TFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSV-VGSSLSDLYSKCGQFKEACELFSS 184
Query: 302 MPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRG 360
+ + +SW MIS + + + +MV+ GV PN+ TFV +L + GL + G
Sbjct: 185 LQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL-EFG 243
Query: 361 RELFDSMAVK---FQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLS 417
+ + ++ V+ ++ K +VD + + +A+ ++ S E LW +++S
Sbjct: 244 KTIHSNIIVRGIPLNVVLKTS----LVDFYSQFSKMEDAVRVLNS-SGEQDVFLWTSVVS 298
Query: 418 A 418
Sbjct: 299 G 299
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 195 bits (495), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 142/468 (30%), Positives = 228/468 (48%), Gaps = 46/468 (9%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATR---VFNHSPNPNIILFNSIIKACS 83
Q+H L+ GLH S + IS+ H A VF N++ +NS+I A
Sbjct: 178 QVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQ 237
Query: 84 LSPPFQQCFHLFSLMRNARAISPDYFTFPSL---LKAASNLRDFQLGQ---SLHAQVTTL 137
++ +F M ++ + D T ++ L +S+L ++ + LH+
Sbjct: 238 CCNLGKKAIGVFMRM-HSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKS 296
Query: 138 GFARHGPVRVGVVELYAN-CERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLEL 196
G V ++++Y+ E D K+F EM +C
Sbjct: 297 GLVTQTEVATALIKVYSEMLEDYTDCYKLFMEM-------------SHC----------- 332
Query: 197 FRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAA 256
R +V+WN +I+ A E A+ LF ++ ++ PD T +VL CA L A
Sbjct: 333 ------RDIVAWNGIITAFAV-YDPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTA 385
Query: 257 DVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISG 316
IH+ GFL D V + NSL+ Y KCG+ + VF++M R+VVSWN+M+
Sbjct: 386 RHALSIHAQVIKGGFLADTV-LNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKA 444
Query: 317 MAYNGMGEVGVGLFEDMVRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPK 376
+ +G + + +F+ M + P+ +TF+ +L+ C+HAG V+ G +F SM K + LP+
Sbjct: 445 YSLHGQVDSILPVFQKM--DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQ 502
Query: 377 LEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELV 436
L HY CV+D+L R EA ++I+ MPM+P A +W ALL +CR HG+ + ++AA +L
Sbjct: 503 LNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLK 562
Query: 437 N-VEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQSAT 483
VEP NS ++ +SNIY E ++E M ++K P S T
Sbjct: 563 ELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWT 610
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 172 RDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREM 231
++VI+ N +I Y K G + ++F M +R+VVSW +I+ + E+E LF M
Sbjct: 94 QNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM 153
Query: 232 LEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGN 291
L F P++ TL +VL C + G+ +H A G L + V N+++ Y +C +
Sbjct: 154 LSHCF-PNEFTLSSVLTSCRY----EPGKQVHGLALKLG-LHCSIYVANAVISMYGRCHD 207
Query: 292 PQAGL---SVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGV 347
A +VF + +N+V+WN+MI+ +G+ +G+F M GV + +T + +
Sbjct: 208 GAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNI 267
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 172/417 (41%), Gaps = 67/417 (16%)
Query: 27 QIHAHFLRHGLHHS-NQILAHF-ISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSL 84
+H H L H +S N ILA+F I++ A + YA +VF+ P N++ + ++I
Sbjct: 80 NLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQ 139
Query: 85 SPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGP 144
+ Q+ F LFS M + P+ FT S+L + ++ G+ +H LG
Sbjct: 140 AGNEQEGFCLFSSMLSH--CFPNEFTLSSVLTSCR----YEPGKQVHGLALKLGLHCSIY 193
Query: 145 VRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRS 204
V V+ +Y C D ++ W + F + ++
Sbjct: 194 VANAVISMYGRCH---DGAAAYE--------AWTV-----------------FEAIKFKN 225
Query: 205 VVSWNLMIS---CLAKGKKEEEALVLFREMLEKGFEPDDATLVTV---LPVCARLGAADV 258
+V+WN MI+ C GKK A+ +F M G D ATL+ + L + L +V
Sbjct: 226 LVTWNSMIAAFQCCNLGKK---AIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEV 282
Query: 259 GE---WIHSYANDKGFLRD------IVSVGNSLVDFYCKCGNPQAGLSVFNEMP-MRNVV 308
+ +HS G + ++ V + +++ Y C +F EM R++V
Sbjct: 283 SKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDC------YKLFMEMSHCRDIV 336
Query: 309 SWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGREL-FDS 366
+WN +I+ A E + LF + + ++P+ TF VL C AGLV L +
Sbjct: 337 AWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKAC--AGLVTARHALSIHA 393
Query: 367 MAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHG 423
+K L ++ +CG + + + M + W ++L A HG
Sbjct: 394 QVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVS-WNSMLKAYSLHG 449
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 142/527 (26%), Positives = 223/527 (42%), Gaps = 108/527 (20%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVF-NHSPNPNIILFNSIIKACSLS 85
QIH H ++ G ++ +++ A R+ A +F N + + S++ S +
Sbjct: 146 QIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQN 205
Query: 86 PPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPV 145
+ F +R S Y TFPS+L A +++ ++G +H + GF + V
Sbjct: 206 GFAFKAIECFRDLRREGNQSNQY-TFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYV 264
Query: 146 RVGVVELYANCERM-------------------------------GDAGKVFDEMRERDV 174
+ ++++YA C M G+A +F M ERD+
Sbjct: 265 QSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDM 324
Query: 175 ----------------------------------------IVWNLMIQGYCKVGELETGL 194
+V N ++ Y K G +++ L
Sbjct: 325 KIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSAL 384
Query: 195 ELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLG 254
++F M ++ V+SW +++ +EAL LF M G PD +VL A L
Sbjct: 385 KVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELT 444
Query: 255 AADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMI 314
+ G+ +H GF + SV NSLV Y KCG+ + +FN M +R++++W +I
Sbjct: 445 LLEFGQQVHGNYIKSGFPSSL-SVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLI 503
Query: 315 SGMAYNGMGEVGVGLFEDMVRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLL 374
G A NG L ED R FDSM + +
Sbjct: 504 VGYAKNG-------LLEDAQR---------------------------YFDSMRTVYGIT 529
Query: 375 PKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKE 434
P EHY C++DL GR G + L+ M +EP A +W A+L+A R HG+ E E AAK
Sbjct: 530 PGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKT 589
Query: 435 LVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
L+ +EP N+ +V LSN+Y+ R DE VR LM+ +I K PG S
Sbjct: 590 LMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCS 636
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 126/268 (47%), Gaps = 5/268 (1%)
Query: 158 RMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAK 217
R+ +A ++FD+M ERD WN MI Y L +LFR ++ +SWN +IS K
Sbjct: 43 RVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCK 102
Query: 218 GKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVS 277
+ EA LF EM G +P++ TL +VL +C L GE IH + GF D V+
Sbjct: 103 SGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLD-VN 161
Query: 278 VGNSLVDFYCKCGNPQAGLSVFNEMP-MRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR- 335
V N L+ Y +C +F M +N V+W +M++G + NG + F D+ R
Sbjct: 162 VVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRRE 221
Query: 336 GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVRE 395
G N TF VL CA G ++ + VK + ++D+ +C +
Sbjct: 222 GNQSNQYTFPSVLTACASVSACRVGVQVHCCI-VKSGFKTNIYVQSALIDMYAKCREMES 280
Query: 396 ALDLIRSMPMEPTAALWGALLSACRTHG 423
A L+ M ++ + W +++ C G
Sbjct: 281 ARALLEGMEVDDVVS-WNSMIVGCVRQG 307
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 163/375 (43%), Gaps = 36/375 (9%)
Query: 56 RVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLL 115
R+ A ++F +P N I +N++I S + F+LF M+ + I P+ +T S+L
Sbjct: 74 RLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQ-SDGIKPNEYTLGSVL 132
Query: 116 KAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMR-ERDV 174
+ ++L G+ +H GF V G++ +YA C+R+ +A +F+ M E++
Sbjct: 133 RMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNN 192
Query: 175 IVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEK 234
+ W M+ GY + G +E FR++ +
Sbjct: 193 VTWTSMLTGYSQNGFAFKAIE-------------------------------CFRDLRRE 221
Query: 235 GFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQA 294
G + + T +VL CA + A VG +H GF +I V ++L+D Y KC ++
Sbjct: 222 GNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIY-VQSALIDMYAKCREMES 280
Query: 295 GLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACCAH 353
++ M + +VVSWN+MI G G+ + +F M R + +D T +L C A
Sbjct: 281 ARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFAL 340
Query: 354 AGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWG 413
+ + + VK +VD+ + G + AL + M +E W
Sbjct: 341 SRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGM-IEKDVISWT 399
Query: 414 ALLSACRTHGDREIA 428
AL++ +G + A
Sbjct: 400 ALVTGNTHNGSYDEA 414
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 191 bits (486), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 130/434 (29%), Positives = 199/434 (45%), Gaps = 43/434 (9%)
Query: 28 IHAHFLRHGLHHSNQI---LAHFISVCASLHRVPYATRVFNHSPNP-NIILFNSIIKACS 83
+H LR G + L HF VC ++ A +VF+ P + + F++++
Sbjct: 147 LHGIALRSGFMVFTDLRNALIHFYCVCG---KISDARKVFDEMPQSVDAVTFSTLMNGYL 203
Query: 84 LSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHG 143
LF +MR + + + T S L A S+L D +S H +G
Sbjct: 204 QVSKKALALDLFRIMRKSEVV-VNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGL---- 258
Query: 144 PVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDR 203
+ D+ + +I Y K G + + +F +
Sbjct: 259 ---------------------------DLDLHLITALIGMYGKTGGISSARRIFDCAIRK 291
Query: 204 SVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIH 263
VV+WN MI AK EE + L R+M + +P+ +T V +L CA AA VG +
Sbjct: 292 DVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVA 351
Query: 264 SYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMG 323
++ D + +G +LVD Y K G + + +FN M ++V SW AMISG +G+
Sbjct: 352 DLLEEERIALDAI-LGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLA 410
Query: 324 EVGVGLFEDMVR---GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHY 380
V LF M V PN+ TF+ VL C+H GLV G F M + PK+EHY
Sbjct: 411 REAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHY 470
Query: 381 GCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEP 440
GCVVDLLGR G + EA +LIR++P+ + W ALL+ACR +G+ ++ E L +
Sbjct: 471 GCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGE 530
Query: 441 WNSGHHVLLSNIYA 454
+ +LL+ +A
Sbjct: 531 THPADAILLAGTHA 544
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 197/416 (47%), Gaps = 38/416 (9%)
Query: 10 RRILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPN 69
+++++ L + ++++IH + ++ GL + ++ ++ +S+ + YA+ +F H N
Sbjct: 29 QKLINDLRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLLAF-SSVLDIRYASSIFEHVSN 87
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQS 129
N+ +FN++I+ S+S ++ F +F+ +R A+ ++ D F+F + LK+ S +G+
Sbjct: 88 TNLFMFNTMIRGYSISDEPERAFSVFNQLR-AKGLTLDRFSFITTLKSCSRELCVSIGEG 146
Query: 130 LHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRER-DVIVWNLMIQGYCKVG 188
LH GF +R ++ Y C ++ DA KVFDEM + D + ++ ++ GY +V
Sbjct: 147 LHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVS 206
Query: 189 ELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLP 248
+ L+LFR M VV + +TL++ L
Sbjct: 207 KKALALDLFRIMRKSEVV-------------------------------VNVSTLLSFLS 235
Query: 249 VCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVV 308
+ LG E H G D+ + +L+ Y K G + +F+ ++VV
Sbjct: 236 AISDLGDLSGAESAHVLCIKIGLDLDLHLI-TALIGMYGKTGGISSARRIFDCAIRKDVV 294
Query: 309 SWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSM 367
+WN MI A G+ E V L M + PN STFVG+L+ CA++ GR + D +
Sbjct: 295 TWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLL 354
Query: 368 AVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHG 423
+ L + +VD+ + G + +A+++ M + + W A++S HG
Sbjct: 355 EEERIALDAILGTA-LVDMYAKVGLLEKAVEIFNRMKDKDVKS-WTAMISGYGAHG 408
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/443 (29%), Positives = 215/443 (48%), Gaps = 39/443 (8%)
Query: 41 NQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRN 100
N +L + S C + Y VF NPN++ +NSII CS + +Q ++ +
Sbjct: 339 NALLDMYCS-CGDMREAFY---VFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLR 394
Query: 101 ARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMG 160
PD +TF + + A + F G+ LH QVT LG+
Sbjct: 395 MSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGY--------------------- 433
Query: 161 DAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKK 220
ER V V ++ Y K E E+ ++F M +R VV W MI ++
Sbjct: 434 ----------ERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGN 483
Query: 221 EEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGN 280
E A+ F EM + D +L +V+ C+ + GE H A GF ++SV
Sbjct: 484 SELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGF-DCVMSVCG 542
Query: 281 SLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTP 339
+LVD Y K G + ++F+ ++ WN+M+ + +GM E + FE ++ G P
Sbjct: 543 ALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMP 602
Query: 340 NDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDL 399
+ T++ +LA C+H G +G+ L++ M + + +HY C+V+L+ + G V EAL+L
Sbjct: 603 DAVTYLSLLAACSHRGSTLQGKFLWNQMKEQ-GIKAGFKHYSCMVNLVSKAGLVDEALEL 661
Query: 400 I-RSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMR 458
I +S P A LW LLSAC + +I AA++++ ++P ++ H+LLSN+YA R
Sbjct: 662 IEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGR 721
Query: 459 WDEVEKVRVLMREGHIKKVPGQS 481
W++V ++R +R K PG S
Sbjct: 722 WEDVAEMRRKIRGLASSKDPGLS 744
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 177/362 (48%), Gaps = 49/362 (13%)
Query: 1 MSKGLQQIERRILSLLHGAKTRTQLTQIHAHFLRHGL-------HHSNQILAHFISVCAS 53
++ + ++ R+ +S+ + R QIHA L G + +N +++ ++ C S
Sbjct: 93 IASSVVELTRKCVSITVLKRAR----QIHALVLTAGAGAATESPYANNNLISMYVR-CGS 147
Query: 54 LHRVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPS 113
L + A +VF+ P+ N++ +N++ A S +P F + + P+ TF S
Sbjct: 148 LEQ---ARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTS 204
Query: 114 LLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERD 173
L++ + L D +G SL++Q+ LG++ + V+ V+ +Y++C
Sbjct: 205 LVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSC----------------- 247
Query: 174 VIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLE 233
G+LE+ +F + +R V+WN MI K K E+ L+ FR ML
Sbjct: 248 --------------GDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLM 293
Query: 234 KGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQ 293
G +P T VL C++LG+ +G+ IH+ L D+ + N+L+D YC CG+ +
Sbjct: 294 SGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADL-PLDNALLDMYCSCGDMR 352
Query: 294 AGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRGVT--PNDSTFVGVLACC 351
VF + N+VSWN++ISG + NG GE + ++ ++R T P++ TF ++
Sbjct: 353 EAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISAT 412
Query: 352 AH 353
A
Sbjct: 413 AE 414
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 148/333 (44%), Gaps = 29/333 (8%)
Query: 126 LGQSLHAQVTTLG------FARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVW-- 177
+G SLH+Q+ LG F + VVEL C + V R+ +V
Sbjct: 68 MGSSLHSQIIKLGSFQMIFFMPLNEIASSVVELTRKCVSI----TVLKRARQIHALVLTA 123
Query: 178 ------------NLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKK-EEEA 224
N +I Y + G LE ++F +M R+VVS+N + S ++ A
Sbjct: 124 GAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYA 183
Query: 225 LVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVD 284
L M + +P+ +T +++ VCA L +G ++S G+ ++V V S++
Sbjct: 184 FPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVV-VQTSVLG 242
Query: 285 FYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDST 343
Y CG+ ++ +F+ + R+ V+WN MI G N E G+ F +M+ GV P T
Sbjct: 243 MYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFT 302
Query: 344 FVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSM 403
+ VL C+ G G+ L + + L L ++D+ CG +REA + +
Sbjct: 303 YSIVLNGCSKLGSYSLGK-LIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRI 361
Query: 404 PMEPTAALWGALLSACRTHGDREIAEIAAKELV 436
P W +++S C +G E A + + L+
Sbjct: 362 H-NPNLVSWNSIISGCSENGFGEQAMLMYRRLL 393
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 94/229 (41%), Gaps = 11/229 (4%)
Query: 178 NLMIQGYCKVGELETGLELFRRMGDRSVVSW---NLMISCLAKGKKEEEALVLFREMLEK 234
N +I Y + LE ++F +M R++V+ + + ++ G ++
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMI 85
Query: 235 GFEPDD---ATLVTVLPVCARLGAADVGEWIHSY--ANDKGFLRDIVSVGNSLVDFYCKC 289
F P + +++V + C + IH+ G + N+L+ Y +C
Sbjct: 86 FFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRC 145
Query: 290 GNPQAGLSVFNEMPMRNVVSWNAMISGMAYN-GMGEVGVGLFEDMV-RGVTPNDSTFVGV 347
G+ + VF++MP RNVVS+NA+ S + N L M V PN STF +
Sbjct: 146 GSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSL 205
Query: 348 LACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREA 396
+ CA V G L +S +K + V+ + CG + A
Sbjct: 206 VQVCAVLEDVLMGSSL-NSQIIKLGYSDNVVVQTSVLGMYSSCGDLESA 253
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 128/461 (27%), Positives = 218/461 (47%), Gaps = 37/461 (8%)
Query: 27 QIHAHFLRHGLHHSNQILAHFI-SVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLS 85
QIH + + G+ N ++ + + + L YA VF + +++ +N +I +CS S
Sbjct: 154 QIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDS 213
Query: 86 PPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPV 145
+ F LMR I PD +T ++ S+LR+ G+ A +GF + V
Sbjct: 214 GNKEVALDQFWLMREME-IQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIV 272
Query: 146 RVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSV 205
+++++ C R+ D+ K+F E+ + D ++ N MI Y
Sbjct: 273 LGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSY--------------------- 311
Query: 206 VSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSY 265
SW+ C E+AL LF + + PD T +VL + D G +HS
Sbjct: 312 -SWH----CCG-----EDALRLFILAMTQSVRPDKFTFSSVLSSMNAV-MLDHGADVHSL 360
Query: 266 ANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEV 325
GF D +V SL++ Y K G+ + VF + ++++ WN +I G+A N
Sbjct: 361 VIKLGFDLD-TAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVE 419
Query: 326 GVGLFEDMV--RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCV 383
+ +F ++ + + P+ T +G+L C +AG V+ G ++F SM + P EHY C+
Sbjct: 420 SLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACI 479
Query: 384 VDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNS 443
++LL R G + EA D+ +P EP++ +W +L A GD +AE AK ++ EP +S
Sbjct: 480 IELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSS 539
Query: 444 GHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQSATT 484
+++L IY RW+ K+R M E +K G S +
Sbjct: 540 FPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKIS 580
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 144/301 (47%), Gaps = 9/301 (2%)
Query: 106 PDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKV 165
P F L+ + + L + +HAQ+ GF R ++LY + +A ++
Sbjct: 2 PSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQL 61
Query: 166 FDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEAL 225
FD++ +++ I WN+ ++G K G L L+LF M +R VVSWN MIS L E +
Sbjct: 62 FDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGI 121
Query: 226 VLFREMLEKGFEPDDAT--LVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLV 283
+F +M P + T ++ L C R GE IH A G R + V NS++
Sbjct: 122 RVFFDMQRWEIRPTEFTFSILASLVTCVRH-----GEQIHGNAICSGVSRYNLVVWNSVM 176
Query: 284 DFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDS 342
D Y + G LSVF M R+VVSWN +I + +G EV + F M + P++
Sbjct: 177 DMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEY 236
Query: 343 TFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRS 402
T V++ C+ + +G++ ++ +K L G +D+ +C + +++ L R
Sbjct: 237 TVSMVVSICSDLRELSKGKQAL-ALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRE 295
Query: 403 M 403
+
Sbjct: 296 L 296
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 136/463 (29%), Positives = 212/463 (45%), Gaps = 52/463 (11%)
Query: 27 QIHAHFLRHG---LHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACS 83
QIH ++ G L IL S C L V VF+ N++ + ++I
Sbjct: 297 QIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVK---SVFHQMSERNVVSWTTMI---- 349
Query: 84 LSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHG 143
S +F MR + P+ TF L+ A + G +H GF
Sbjct: 350 -SSNKDDAVSIFLNMR-FDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEP 407
Query: 144 PVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDR 203
V + LYA E + DA K F+ D+ R
Sbjct: 408 SVGNSFITLYAKFEALEDAKKAFE-----DITF--------------------------R 436
Query: 204 SVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADV----G 259
++SWN MIS A+ EAL +F + P++ T +VL A A D+ G
Sbjct: 437 EIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAF--AEDISVKQG 493
Query: 260 EWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAY 319
+ H++ G L V ++L+D Y K GN VFNEM +N W ++IS +
Sbjct: 494 QRCHAHLLKLG-LNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSS 552
Query: 320 NGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLE 378
+G E + LF M++ V P+ TF+ VL C G+VD+G E+F+ M + L P E
Sbjct: 553 HGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHE 612
Query: 379 HYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNV 438
HY C+VD+LGR G ++EA +L+ +P P ++ ++L +CR HG+ ++ A+ + +
Sbjct: 613 HYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEM 672
Query: 439 EPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
+P SG +V + NIYAE+ WD+ ++R MR+ ++ K G S
Sbjct: 673 KPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFS 715
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 169/404 (41%), Gaps = 45/404 (11%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
Q+ + ++ GL + FI++ + A RVF+ ++I +NS++ S
Sbjct: 195 QLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEG 254
Query: 87 PFQQCFHLFSLMRNA--RAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGP 144
F F + R+ + D+ +F S++ + D +L + +H G+
Sbjct: 255 TFG--FEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGY----- 307
Query: 145 VRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRS 204
E + V N+++ Y K G LE +F +M +R+
Sbjct: 308 --------------------------ESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERN 341
Query: 205 VVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHS 264
VVSW MIS +++A+ +F M G P++ T V ++ G IH
Sbjct: 342 VVSWTTMIS-----SNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHG 396
Query: 265 YANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGE 324
GF+ + SVGNS + Y K + F ++ R ++SWNAMISG A NG
Sbjct: 397 LCIKTGFVSE-PSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSH 455
Query: 325 VGVGLFEDMVRGVTPNDSTFVGVLACCAHAG--LVDRGRELFDSMAVKFQLLPKLEHYGC 382
+ +F PN+ TF VL A A V +G+ + +K L
Sbjct: 456 EALKMFLSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHL-LKLGLNSCPVVSSA 514
Query: 383 VVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDRE 426
++D+ + G++ E+ + M + +W +++SA +HGD E
Sbjct: 515 LLDMYAKRGNIDESEKVFNEMS-QKNQFVWTSIISAYSSHGDFE 557
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 182/457 (39%), Gaps = 98/457 (21%)
Query: 56 RVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLL 115
R A +F + +P+++ +N+I+ + Q + M++A + D FT+ + L
Sbjct: 126 RFDNALCIFENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSA-GVVFDAFTYSTAL 181
Query: 116 KAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVI 175
F LG L + V G V + +Y+ A +VFDEM +D+I
Sbjct: 182 SFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMI 241
Query: 176 VWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKG 235
WN ++ G + G G EA+V+FR+M+ +G
Sbjct: 242 SWNSLLSGLSQEGTF--GF----------------------------EAVVIFRDMMREG 271
Query: 236 FEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAG 295
E D + +V+ C + IH +G+ ++ VGN L+ Y KCG +A
Sbjct: 272 VELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGY-ESLLEVGNILMSRYSKCGVLEAV 330
Query: 296 LSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVL------ 348
SVF++M RNVVSW MIS + V +F +M GV PN+ TFVG++
Sbjct: 331 KSVFHQMSERNVVSWTTMISSNK-----DDAVSIFLNMRFDGVYPNEVTFVGLINAVKCN 385
Query: 349 ----------ACCAHAGLVDRGR--ELFDSMAVKFQLLPKLEH------------YGCVV 384
C G V F ++ KF+ L + + ++
Sbjct: 386 EQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMI 445
Query: 385 DLLGRCGHVREALDLIRSMPME--PTAALWGALLSACRTHGDREIAEIAAKELVNVEPWN 442
+ G EAL + S E P +G++L+A IA E ++V+
Sbjct: 446 SGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLNA-----------IAFAEDISVKQGQ 494
Query: 443 SGH-HVL-------------LSNIYAEEMRWDEVEKV 465
H H+L L ++YA+ DE EKV
Sbjct: 495 RCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKV 531
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 113/249 (45%), Gaps = 8/249 (3%)
Query: 174 VIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLE 233
V V N ++ Y K G + L +F + D VVSWN ++S + AL M
Sbjct: 111 VCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGF---DDNQIALNFVVRMKS 167
Query: 234 KGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQ 293
G D T T L C +G + S G D+V VGNS + Y + G+ +
Sbjct: 168 AGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLV-VGNSFITMYSRSGSFR 226
Query: 294 AGLSVFNEMPMRNVVSWNAMISGMAYNG-MGEVGVGLFEDMVR-GVTPNDSTFVGVLACC 351
VF+EM ++++SWN+++SG++ G G V +F DM+R GV + +F V+ C
Sbjct: 227 GARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTC 286
Query: 352 AHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAAL 411
H + R++ + +K LE ++ +CG V EA+ + E
Sbjct: 287 CHETDLKLARQI-HGLCIKRGYESLLEVGNILMSRYSKCG-VLEAVKSVFHQMSERNVVS 344
Query: 412 WGALLSACR 420
W ++S+ +
Sbjct: 345 WTTMISSNK 353
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 108/264 (40%), Gaps = 38/264 (14%)
Query: 4 GLQQIERRILSLLHGAKTRTQLTQ---IHAHFLRHGLHHSNQILAHFISVCASLHRVPYA 60
G+ E + L++ K Q+ + IH ++ G + FI++ A + A
Sbjct: 367 GVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDA 426
Query: 61 TRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASN 120
+ F II +N++I + + + +F + A P+ +TF S+L A +
Sbjct: 427 KKAFEDITFREIISWNAMISGFAQNGFSHEALKMF--LSAAAETMPNEYTFGSVLNAIAF 484
Query: 121 LRDFQL--GQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWN 178
D + GQ HA + LG V ++++YA + ++ KVF+EM +++ VW
Sbjct: 485 AEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWT 544
Query: 179 LMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEP 238
+I Y G+ ET + LF + M+++ P
Sbjct: 545 SIISAYSSHGDFETVMNLFHK-------------------------------MIKENVAP 573
Query: 239 DDATLVTVLPVCARLGAADVGEWI 262
D T ++VL C R G D G I
Sbjct: 574 DLVTFLSVLTACNRKGMVDKGYEI 597
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 85/204 (41%), Gaps = 12/204 (5%)
Query: 224 ALVLFREMLEKGF---EPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGN 280
AL +F+E L+ G+ D+ TL L C G G IH ++ GF V V N
Sbjct: 59 ALSIFKENLQLGYFGRHMDEVTLCLALKACR--GDLKRGCQIHGFSTTSGF-TSFVCVSN 115
Query: 281 SLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTP 339
+++ Y K G L +F + +VVSWN ++SG N ++ + M GV
Sbjct: 116 AVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVF 172
Query: 340 NDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDL 399
+ T+ L+ C + G +L S VK L L + + R G R A +
Sbjct: 173 DAFTYSTALSFCVGSEGFLLGLQL-QSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRV 231
Query: 400 IRSMPMEPTAALWGALLSACRTHG 423
M + + W +LLS G
Sbjct: 232 FDEMSFKDMIS-WNSLLSGLSQEG 254
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 182 bits (461), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 119/429 (27%), Positives = 214/429 (49%), Gaps = 6/429 (1%)
Query: 57 VPYATRVFNHSPNPN-IILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLL 115
+ A VF +P N I +N++I + + ++ + M + D +F ++L
Sbjct: 209 IDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEE-NGLKWDEHSFGAVL 267
Query: 116 KAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVI 175
S+L+ ++G+ +HA+V G + V G+V++Y C M A ++
Sbjct: 268 NVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLY 327
Query: 176 VWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREML-EK 234
+ MI GY G++ LF + ++++V W M ++ + L L R + +
Sbjct: 328 SASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANE 387
Query: 235 GFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQA 294
PD +V+VL C+ + G+ IH ++ G L D V + VD Y KCGN +
Sbjct: 388 TNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLV-TAFVDMYSKCGNVEY 446
Query: 295 GLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRG-VTPNDSTFVGVLACCAH 353
+F+ R+ V +NAMI+G A++G FEDM G P++ TF+ +L+ C H
Sbjct: 447 AERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRH 506
Query: 354 AGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMP-MEPTAALW 412
GLV G + F SM + + P+ HY C++DL G+ + +A++L+ + +E A +
Sbjct: 507 RGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVIL 566
Query: 413 GALLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREG 472
GA L+AC + + E+ + ++L+ +E N ++ ++N YA RWDE++++R MR
Sbjct: 567 GAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGK 626
Query: 473 HIKKVPGQS 481
++ G S
Sbjct: 627 ELEIFSGCS 635
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 133/287 (46%), Gaps = 40/287 (13%)
Query: 149 VVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMG-DRSVVS 207
+V LY+ + +A VFDEM ER+V WN +I Y K ++ ELF +R +++
Sbjct: 29 LVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLIT 88
Query: 208 WNLMISCLAKGKK-EEEALVLFREMLEKGFEP---DDATLVTVLPVCARLGAADVGEWIH 263
+N ++S AK E EA+ +F EM K + DD T+ T++ + A+L GE +H
Sbjct: 89 YNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLH 148
Query: 264 ----SYANDK---------------GFLRDIVSVGN-SLVDF------------YCKCGN 291
ND G +++ ++ N S V+F YC+ G+
Sbjct: 149 GVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGD 208
Query: 292 PQAGLSVFNEMP-MRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLA 349
LSVF P + + +SWN +I+G A NG E + + M G+ ++ +F VL
Sbjct: 209 IDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLN 268
Query: 350 CCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREA 396
+ + G+E+ + K G +VD+ +CG+++ A
Sbjct: 269 VLSSLKSLKIGKEVHARVLKNGSYSNKFVSSG-IVDVYCKCGNMKYA 314
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 130/466 (27%), Positives = 213/466 (45%), Gaps = 52/466 (11%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
Q+HA ++ G I + + + + RVF +++ +N+++ +
Sbjct: 105 QVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNG 164
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
++ +F+ M R + FT S++K ++L+ Q G+ +HA V G
Sbjct: 165 KGKEALGVFAAMYRER-VEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG-------- 215
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVW-NLMIQGYCKVGELETGLELFRRMGDRS- 204
RD++V MI Y VG + ++++ + +
Sbjct: 216 -------------------------RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTD 250
Query: 205 VVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHS 264
V N +IS + + +EA +L P+ L + L C+ +G+ IH
Sbjct: 251 EVMLNSLISGCIRNRNYKEAFLLMSRQ-----RPNVRVLSSSLAGCSDNSDLWIGKQIHC 305
Query: 265 YANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGE 324
A GF+ D + N L+D Y KCG ++F +P ++VVSW +MI A NG G
Sbjct: 306 VALRNGFVSD-SKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGV 364
Query: 325 VGVGLFEDMVR---GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYG 381
+ +F +M GV PN TF+ V++ CAHAGLV G+E F M K++L+P EHY
Sbjct: 365 KALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYV 424
Query: 382 CVVDLLGRCGHVREALDLIRSMPMEPT-----AALWGALLSACRTHGDREIAEIAAKELV 436
C +D+L + G E L+ M ME A+W A+LSAC + D E A+ L+
Sbjct: 425 CFIDILSKAGETEEIWRLVERM-MENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLM 483
Query: 437 -NVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
P N+ +VL+SN YA +WD VE++R ++ + K G S
Sbjct: 484 EETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 144/323 (44%), Gaps = 42/323 (13%)
Query: 105 SPDY--FTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDA 162
SPD TF +L A S L + G+ +HA + G + ++++Y+ + D+
Sbjct: 79 SPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDS 138
Query: 163 GKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEE 222
+VF+ + E+D++ WN ++ G+ + G KGK
Sbjct: 139 VRVFESVEEKDLVSWNALLSGFLRNG----------------------------KGK--- 167
Query: 223 EALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSL 282
EAL +F M + E + TL +V+ CA L G+ +H+ G RD+V +G ++
Sbjct: 168 EALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG--RDLVVLGTAM 225
Query: 283 VDFYCKCGNPQAGLSVFNEMPMR-NVVSWNAMISGMAYNGMGEVGVGLFEDMVRGVTPND 341
+ FY G + V+N + + + V N++ISG N + L PN
Sbjct: 226 ISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQ----RPNV 281
Query: 342 STFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIR 401
LA C+ + G+++ +A++ + + ++D+ G+CG + +A + R
Sbjct: 282 RVLSSSLAGCSDNSDLWIGKQI-HCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFR 340
Query: 402 SMPMEPTAALWGALLSACRTHGD 424
++P + + W +++ A +GD
Sbjct: 341 AIPSKSVVS-WTSMIDAYAVNGD 362
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 119/280 (42%), Gaps = 36/280 (12%)
Query: 197 FRRMGDRSVVSWNLMISCL-------------------------------AKGKKEEEAL 225
F R+G+ +V S NL++ C+ + + L
Sbjct: 10 FIRLGNVTVKSTNLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTL 69
Query: 226 VLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDF 285
LF ++ + T VL C+ L + G +H+ +G +S +L+D
Sbjct: 70 ALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTIS-KTALIDM 128
Query: 286 YCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRG-VTPNDSTF 344
Y K G+ + VF + +++VSWNA++SG NG G+ +G+F M R V ++ T
Sbjct: 129 YSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTL 188
Query: 345 VGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMP 404
V+ CA ++ +G+++ + V + L L ++ G + EA+ + S+
Sbjct: 189 SSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLGT--AMISFYSSVGLINEAMKVYNSLN 246
Query: 405 MEPTAALWGALLSAC-RTHGDREIAEIAAKELVNVEPWNS 443
+ + +L+S C R +E + +++ NV +S
Sbjct: 247 VHTDEVMLNSLISGCIRNRNYKEAFLLMSRQRPNVRVLSS 286
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 178 bits (451), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 192/405 (47%), Gaps = 15/405 (3%)
Query: 27 QIHAHFLRHGLHHS---NQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACS 83
QIH +++G L F + C +L + F++ + NI+ +N+++ +
Sbjct: 337 QIHGMLIKNGCETGIVLGNALIDFYAKCGNLED---SRLCFDYIRDKNIVCWNALLSGYA 393
Query: 84 LSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHG 143
+ C LF M P +TF + LK+ Q LH+ + +G+ +
Sbjct: 394 -NKDGPICLSLFLQMLQM-GFRPTEYTFSTALKSCCVTE----LQQLHSVIVRMGYEDND 447
Query: 144 PVRVGVVELYANCERMGDAGKVFDEMR-ERDVIVWNLMIQGYCKVGELETGLELFRRMGD 202
V ++ YA + M DA + D V+ N++ Y + G+ ++L +
Sbjct: 448 YVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQ 507
Query: 203 RSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWI 262
VSWN+ I+ ++ EE + LF+ ML+ PD T V++L +C++L +G I
Sbjct: 508 PDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSI 567
Query: 263 HSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGM 322
H F V N L+D Y KCG+ ++ + VF E +N+++W A+IS + +G
Sbjct: 568 HGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGY 627
Query: 323 GEVGVGLF-EDMVRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYG 381
G+ + F E + G P+ +F+ +L C H G+V G LF M + + P+++HY
Sbjct: 628 GQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMK-DYGVEPEMDHYR 686
Query: 382 CVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDRE 426
C VDLL R G+++EA LIR MP A +W L C + +
Sbjct: 687 CAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCNRFAEEQ 731
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 117/447 (26%), Positives = 190/447 (42%), Gaps = 68/447 (15%)
Query: 26 TQIHAHFLRHGLHHSNQILAH-FISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSL 84
TQ+H L++GL ++ + + + L + A +VF P ++ +N ++
Sbjct: 133 TQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGH 192
Query: 85 SPPFQQCFHLF-SLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHG 143
++C F L+R +++ +F +LK S ++D + + LH T G
Sbjct: 193 RGFLKECMFFFRELVRMGASLTES--SFLGVLKGVSCVKDLDISKQLHCSATKKGL---- 246
Query: 144 PVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDR 203
+CE + V N +I Y K G +F+ G
Sbjct: 247 -----------DCE----------------ISVVNSLISAYGKCGNTHMAERMFQDAGSW 279
Query: 204 SVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIH 263
+VSWN +I AK + +AL LF M E GF P+ T V+VL V + + G IH
Sbjct: 280 DIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIH 339
Query: 264 SYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMG 323
G IV +GN+L+DFY KCGN + F+ + +N+V WNA++SG A N G
Sbjct: 340 GMLIKNGCETGIV-LGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDG 397
Query: 324 EVGVGLFEDMVR-GVTPNDSTFVGVL-ACCA------HAGLVDRGRELFDSM-------A 368
+ + LF M++ G P + TF L +CC H+ +V G E D +
Sbjct: 398 PICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSY 457
Query: 369 VKFQLL-------------PKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGAL 415
K QL+ + V + R G E++ LI ++ +P W
Sbjct: 458 AKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLE-QPDTVSWNIA 516
Query: 416 LSAC-RTHGDREIAEIAAKEL-VNVEP 440
++AC R+ E+ E+ L N+ P
Sbjct: 517 IAACSRSDYHEEVIELFKHMLQSNIRP 543
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 162/378 (42%), Gaps = 45/378 (11%)
Query: 46 HFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAIS 105
+ IS+ L V A +VF+ P N + FN+IIK S + + +FS MR +
Sbjct: 54 NIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYL- 112
Query: 106 PDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLG-FARHGPVRVGVVELYANCERMGDAGK 164
P+ T LL AS D + G LH G F V ++ LY + + A +
Sbjct: 113 PNQSTVSGLLSCAS--LDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQ 170
Query: 165 VFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEA 224
VF++M + LET WN M+S L +E
Sbjct: 171 VFEDMPFK----------------SLET---------------WNHMMSLLGHRGFLKEC 199
Query: 225 LVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVD 284
+ FRE++ G +++ + VL + + D+ + +H A KG +I SV NSL+
Sbjct: 200 MFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEI-SVVNSLIS 258
Query: 285 FYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDST 343
Y KCGN +F + ++VSWNA+I A + + LF M G +PN T
Sbjct: 259 AYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGT 318
Query: 344 FVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREA---LDLI 400
+V VL + L+ GR++ M +K + ++D +CG++ ++ D I
Sbjct: 319 YVSVLGVSSLVQLLSCGRQI-HGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYI 377
Query: 401 RSMPMEPTAALWGALLSA 418
R + W ALLS
Sbjct: 378 R----DKNIVCWNALLSG 391
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 106/474 (22%), Positives = 185/474 (39%), Gaps = 81/474 (17%)
Query: 4 GLQQIERRILSLLHGAKTRTQL---TQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYA 60
G E L +L G L Q+H + GL ++ IS A
Sbjct: 210 GASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMA 269
Query: 61 TRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASN 120
R+F + + +I+ +N+II A + S + LF M SP+ T+ S+L +S
Sbjct: 270 ERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPE-HGFSPNQGTYVSVLGVSSL 328
Query: 121 LRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLM 180
++ G+ +H + G + +++ YA C + D+ FD +R+++++ WN +
Sbjct: 329 VQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNAL 388
Query: 181 IQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDD 240
+ GY K L LF +ML+ GF P +
Sbjct: 389 LSGY--------------------------------ANKDGPICLSLFLQMLQMGFRPTE 416
Query: 241 ATLVTVLPVCA------------RLGAAD----VGEWIHSYA-----NDKGFLRDIVSVG 279
T T L C R+G D + + SYA ND L D S
Sbjct: 417 YTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGP 476
Query: 280 NSLVDF------YCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM 333
S+V Y + G + + + + + VSWN I+ + + E + LF+ M
Sbjct: 477 TSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHM 536
Query: 334 VRG-VTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGC--------VV 384
++ + P+ TFV +L+ C+ + G + L+ K + + C ++
Sbjct: 537 LQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHG-------LITKTD-FSCADTFVCNVLI 588
Query: 385 DLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNV 438
D+ G+CG +R + + E W AL+S HG + A KE +++
Sbjct: 589 DMYGKCGSIRSVMKVFEE-TREKNLITWTALISCLGIHGYGQEALEKFKETLSL 641
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 127/287 (44%), Gaps = 37/287 (12%)
Query: 113 SLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRV--GVVELYANCERMGDAGKVFDEMR 170
SLL F ++LHA TL PV V ++ LY + AGKVFD+M
Sbjct: 17 SLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMP 76
Query: 171 ERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFRE 230
ER+ + +N +I+GY K G+++ +W +F E
Sbjct: 77 ERNKVSFNTIIKGYSKYGDVDK--------------AWG-----------------VFSE 105
Query: 231 MLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCG 290
M G+ P+ +T V+ L CA L G +H + G VG L+ Y +
Sbjct: 106 MRYFGYLPNQST-VSGLLSCASLDVR-AGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLD 163
Query: 291 NPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLA 349
+ VF +MP +++ +WN M+S + + G + + F ++VR G + +S+F+GVL
Sbjct: 164 LLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLK 223
Query: 350 CCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREA 396
+ +D ++L S A K L ++ ++ G+CG+ A
Sbjct: 224 GVSCVKDLDISKQLHCS-ATKKGLDCEISVVNSLISAYGKCGNTHMA 269
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 7/178 (3%)
Query: 243 LVTVLPVCARLGAADVGEWIHSYA-NDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNE 301
+V++L VC + + + +H+ + L V V N+++ Y K G VF++
Sbjct: 15 VVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQ 74
Query: 302 MPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVDRG 360
MP RN VS+N +I G + G + G+F +M G PN ST G+L+C A L R
Sbjct: 75 MPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSC---ASLDVRA 131
Query: 361 RELFDSMAVKFQLLPKLEHYG-CVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLS 417
+++K+ L G C++ L GR + A + MP + W ++S
Sbjct: 132 GTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLET-WNHMMS 188
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 134/473 (28%), Positives = 208/473 (43%), Gaps = 76/473 (16%)
Query: 19 AKTRTQLTQIHAHFLR-HGLHHSNQILAHFISVCASLHRVPYATR-VFNHSPNPNIILFN 76
A T QL QIHA + + L + + IS C L Y TR +F+ PN+ + N
Sbjct: 16 ALTFPQLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVN 75
Query: 77 SIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTT 136
S+ K S L+ R+ I PD F+FP ++K+A + G A V
Sbjct: 76 SMFKYFSKMDMANDVLRLYE-QRSRCGIMPDAFSFPVVIKSAG-----RFGILFQALVEK 129
Query: 137 LGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGY------------ 184
LGF + VR ++++Y E + A KVFD++ +R WN+MI GY
Sbjct: 130 LGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKL 189
Query: 185 -------------------CKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEAL 225
KV +LE + F RM ++SVVSWN M+S A+ E+AL
Sbjct: 190 FDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDAL 249
Query: 226 VLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDF 285
LF +ML G P++ T V V+ C+ + + ++K +R V +L+D
Sbjct: 250 RLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKR-VRLNCFVKTALLDM 308
Query: 286 YCKCGNPQAGLSVFNE--------------------------------MPMRNVVSWNAM 313
+ KC + Q+ +FNE MP RNVVSWN++
Sbjct: 309 HAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSL 368
Query: 314 ISGMAYNGMGEVGVGLFEDMVR--GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKF 371
I+G A+NG + + FEDM+ P++ T + VL+ C H ++ G + D + K
Sbjct: 369 IAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIR-KN 427
Query: 372 QLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGD 424
Q+ Y ++ + R G++ EA + M E + L +A +GD
Sbjct: 428 QIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMK-ERDVVSYNTLFTAFAANGD 479
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 177/350 (50%), Gaps = 25/350 (7%)
Query: 48 ISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPD 107
I+ A + + A + F+ P +++ +N+++ + + + LF+ M + P+
Sbjct: 205 ITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRL-GVRPN 263
Query: 108 YFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFD 167
T+ ++ A S D L +SL + + V+ +++++A C + A ++F+
Sbjct: 264 ETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFN 323
Query: 168 EM-RERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALV 226
E+ +R+++ WN MI GY ++G++ + +LF M R+VVSWN +I+ A + A+
Sbjct: 324 ELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIE 383
Query: 227 LFREMLEKG-FEPDDATLVTVLPVCARLGAADVGEWIHSYA-------NDKGFLRDIVSV 278
F +M++ G +PD+ T+++VL C + ++G+ I Y ND G+
Sbjct: 384 FFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGY------- 436
Query: 279 GNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGV 337
SL+ Y + GN VF+EM R+VVS+N + + A NG G + L M G+
Sbjct: 437 -RSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGI 495
Query: 338 TPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLL 387
P+ T+ VL C AGL+ G+ +F S+ P +HY C +DLL
Sbjct: 496 EPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN-----PLADHYAC-MDLL 539
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/443 (26%), Positives = 201/443 (45%), Gaps = 37/443 (8%)
Query: 44 LAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARA 103
I+ S V A +F + N I +N+++ + + LF+ M R
Sbjct: 354 FTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQ-RG 412
Query: 104 ISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAG 163
+ F+ S + A + + ++ + +H G A + ++ ++++ CERM DA
Sbjct: 413 VELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAE 472
Query: 164 KVFDEMRER--DVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKE 221
++FD+ +I GY + G + + LF R
Sbjct: 473 EMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRT--------------------- 511
Query: 222 EEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNS 281
+ E+ D+ +L +L VC LG ++G IH YA G+ DI S+GNS
Sbjct: 512 ---------LCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDI-SLGNS 561
Query: 282 LVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPN 340
L+ Y KC + + +FN M +V+SWN++IS G+ + L+ M + + P+
Sbjct: 562 LISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPD 621
Query: 341 DSTFVGVLACCAH--AGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALD 398
T V++ + + + R+LF SM + + P EHY V +LG G + EA D
Sbjct: 622 IITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAED 681
Query: 399 LIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMR 458
I SMP++P ++ ALL +CR H + +A+ AK +++ +P ++L SNIY+
Sbjct: 682 TINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGF 741
Query: 459 WDEVEKVRVLMREGHIKKVPGQS 481
W E +R MRE +K P +S
Sbjct: 742 WHRSEMIREEMRERGYRKHPAKS 764
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/373 (19%), Positives = 167/373 (44%), Gaps = 9/373 (2%)
Query: 62 RVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNL 121
++F+ P ++ +N+++ + + F LF M D FT +LL + ++
Sbjct: 239 KLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDS 298
Query: 122 RDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMI 181
G+ LH + +G + V ++ Y+ M +++ M +D + + MI
Sbjct: 299 SVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMI 358
Query: 182 QGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDA 241
Y G +++ +E+F + +++ +++N +++ + +AL LF +ML++G E D
Sbjct: 359 TAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDF 418
Query: 242 TLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNE 301
+L + + C + V E IH + G + + +L+D +C +F++
Sbjct: 419 SLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFN-PCIQTALLDMCTRCERMADAEEMFDQ 477
Query: 302 MP--MRNVVSWNAMISGMAYNGMGEVGVGLFEDMV--RGVTPNDSTFVGVLACCAHAGLV 357
P + + + ++I G A NG+ + V LF + + + ++ + +LA C G
Sbjct: 478 WPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFR 537
Query: 358 DRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLS 417
+ G ++ A+K + ++ + +C +A+ + +M E W +L+S
Sbjct: 538 EMGYQI-HCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTM-REHDVISWNSLIS 595
Query: 418 A--CRTHGDREIA 428
+ +GD +A
Sbjct: 596 CYILQRNGDEALA 608
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 135/296 (45%), Gaps = 11/296 (3%)
Query: 153 YANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMI 212
Y + E F ++RE + N +I Y K+G + +F + +VVS+ +I
Sbjct: 93 YHDVEVTKAVHASFLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALI 152
Query: 213 SCLAKGKKEEEALVLFREMLEKGF-EPDDATLVTVLPVCARLGAADVGEWIHSYANDKGF 271
S ++ E EAL +F M + G +P++ T V +L C R+ +G IH GF
Sbjct: 153 SGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGF 212
Query: 272 LRDIVSVGNSLVDFYCKCGNPQAG--LSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGL 329
L + V NSL+ Y K L +F+E+P R+V SWN ++S + G L
Sbjct: 213 LNSVF-VSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDL 271
Query: 330 FEDM--VRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLL 387
F +M V G + T +L+ C + ++ RGREL A++ L+ +L ++
Sbjct: 272 FYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGREL-HGRAIRIGLMQELSVNNALIGFY 330
Query: 388 GRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNS 443
+ +++ L M M A + +++A + G + + A + NV N+
Sbjct: 331 SKFWDMKKVESLYEMM-MAQDAVTFTEMITAYMSFG---MVDSAVEIFANVTEKNT 382
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 164/418 (39%), Gaps = 81/418 (19%)
Query: 28 IHAHFLRHGLHHSNQILAH-FISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
+HA FL+ L L + IS L A VF +P ++ + ++I S
Sbjct: 102 VHASFLK--LREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLN 159
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
+ +F MR A + P+ +TF ++L A + F LG +H + GF V
Sbjct: 160 LEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVS 219
Query: 147 VGVVELY-----ANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMG 201
++ LY ++C+ D K+FDE+ +RDV WN ++
Sbjct: 220 NSLMSLYDKDSGSSCD---DVLKLFDEIPQRDVASWNTVV-------------------- 256
Query: 202 DRSVVSWNLMISCLAKGKKEEEALVLFREMLE-KGFEPDDATLVTVLPVCARLGAADVGE 260
S L K K +A LF EM +GF D TL T+L C G
Sbjct: 257 -----------SSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGR 305
Query: 261 WIHSYANDKGFLRDIVSVGNSLVDFYCK-------------------------------C 289
+H A G ++++ SV N+L+ FY K
Sbjct: 306 ELHGRAIRIGLMQEL-SVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSF 364
Query: 290 GNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVL 348
G + + +F + +N +++NA+++G NG G + LF DM+ RGV D + +
Sbjct: 365 GMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAV 424
Query: 349 ACCAHAGLVDRGR--ELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMP 404
C GLV + E +KF ++D+ RC + +A ++ P
Sbjct: 425 DAC---GLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWP 479
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 86/223 (38%), Gaps = 33/223 (14%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPN--PNIILFNSIIKACSL 84
QIH ++ G + I + +C R+ A +F+ P+ + SII +
Sbjct: 438 QIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYAR 497
Query: 85 SPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGP 144
+ + LF + + D + +L L ++G +H G+
Sbjct: 498 NGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDIS 557
Query: 145 VRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRS 204
+ ++ +YA C DA K+F+ MRE DVI WN +I Y + +R GD
Sbjct: 558 LGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCY-----------ILQRNGD-- 604
Query: 205 VVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVL 247
EAL L+ M EK +PD TL V+
Sbjct: 605 ------------------EALALWSRMNEKEIKPDIITLTLVI 629
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 210/458 (45%), Gaps = 48/458 (10%)
Query: 27 QIHAHFLRHGLHHSN----QILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKAC 82
Q+H+ ++ G + SN +L + S C L + R FN P ++I +NSI+ C
Sbjct: 234 QLHSLVVKSGWNISNIFVANVLVDYYSACGDLSG---SMRSFNAVPEKDVISWNSIVSVC 290
Query: 83 SLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARH 142
+ LFS M+ P F S L S D Q G+ +H V +GF
Sbjct: 291 ADYGSVLDSLDLFSKMQ-FWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGF--- 346
Query: 143 GPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGD 202
V L+ V + +I Y K +E L++ +
Sbjct: 347 -----DVSSLH----------------------VQSALIDMYGKCNGIENSALLYQSLPC 379
Query: 203 RSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADV--GE 260
++ N +++ L ++ + +F M+++G D+ TL TVL + +
Sbjct: 380 LNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCT 439
Query: 261 WIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYN 320
+H A G+ D V+V SL+D Y K G + VF+E+ N+ ++I+G A N
Sbjct: 440 LVHCCAIKSGYAAD-VAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARN 498
Query: 321 GMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEH 379
GMG V + +M R + P++ T + VL+ C+H+GLV+ G +FDS+ K+ + P +
Sbjct: 499 GMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKL 558
Query: 380 YGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVE 439
Y C+VDLLGR G V +A L+ + W +LL +CR H + I AA+ L+N+E
Sbjct: 559 YACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLE 618
Query: 440 PWNSGHHVLLSNIYAEEMRWD------EVEKVRVLMRE 471
P N ++ +S Y E ++ E+ R LMRE
Sbjct: 619 PENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMRE 656
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 146/346 (42%), Gaps = 33/346 (9%)
Query: 60 ATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAAS 119
A F+ +++ +N +I S + L++ M + + TFPS+L S
Sbjct: 65 AHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSC-GLRESASTFPSVLSVCS 123
Query: 120 NLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNL 179
+ + G +H +V +LGF + VR +V LYA C R+ D
Sbjct: 124 DELFCREGIQVHCRVISLGFGCNMFVRSALVGLYA-CLRLVD------------------ 164
Query: 180 MIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPD 239
L+LF M DR++ NL++ C + + + ++ M +G +
Sbjct: 165 ------------VALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKN 212
Query: 240 DATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVF 299
T ++ C+ G+ +HS G+ + V N LVD+Y CG+ + F
Sbjct: 213 GLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSF 272
Query: 300 NEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVD 358
N +P ++V+SWN+++S A G + LF M G P+ F+ L C+ +
Sbjct: 273 NAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQ 332
Query: 359 RGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMP 404
G+++ + + L ++D+ G+C + + L +S+P
Sbjct: 333 SGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLP 378
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 112/267 (41%), Gaps = 9/267 (3%)
Query: 161 DAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKK 220
D +E V N I K G L + E F M R VV++NL+IS ++
Sbjct: 33 DFSSFLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGC 92
Query: 221 EEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGN 280
A+ L+ EM+ G +T +VL VC+ G +H GF ++ V +
Sbjct: 93 SLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMF-VRS 151
Query: 281 SLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR----G 336
+LV Y L +F+EM RN+ N ++ G + LFE +R G
Sbjct: 152 ALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESK---RLFEVYLRMELEG 208
Query: 337 VTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREA 396
V N T+ ++ C+H LV G++L + + + +VD CG + +
Sbjct: 209 VAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGS 268
Query: 397 LDLIRSMPMEPTAALWGALLSACRTHG 423
+ ++P E W +++S C +G
Sbjct: 269 MRSFNAVP-EKDVISWNSIVSVCADYG 294
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 185/380 (48%), Gaps = 36/380 (9%)
Query: 60 ATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAAS 119
A +F+ P NI+ +N+++ + + + +LMR + D T +L S
Sbjct: 348 ARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQ-EIENIDNVTLVWILNVCS 406
Query: 120 NLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNL 179
+ D Q+G+ H + RHG + +VIV N
Sbjct: 407 GISDVQMGKQAHGFIY-----RHG--------------------------YDTNVIVANA 435
Query: 180 MIQGYCKVGELETGLELFRRMGD-RSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEP 238
++ Y K G L++ FR+M + R VSWN +++ +A+ + E+AL F E ++ +P
Sbjct: 436 LLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFF-EGMQVEAKP 494
Query: 239 DDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSV 298
TL T+L CA + A ++G+ IH + G+ D+V G ++VD Y KC + V
Sbjct: 495 SKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRG-AMVDMYSKCRCFDYAIEV 553
Query: 299 FNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLV 357
F E R+++ WN++I G NG + LF + GV P+ TF+G+L C G V
Sbjct: 554 FKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHV 613
Query: 358 DRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLS 417
+ G + F SM+ K+ + P++EHY C+++L + G + + + + MP +P + +
Sbjct: 614 ELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRIND 673
Query: 418 ACRTHGDREIAEIAAKELVN 437
AC+ + ++ AAK L+N
Sbjct: 674 ACQRYRWSKLGAWAAKRLMN 693
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 117/459 (25%), Positives = 212/459 (46%), Gaps = 33/459 (7%)
Query: 25 LTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSL 84
L Q+H +++G + + + V + A RVF+ NP+ + +N I++
Sbjct: 181 LRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLE 240
Query: 85 SPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGP 144
+ +F M + P T S++ A S ++G+ +HA L
Sbjct: 241 MGFNDEAVVMFFKMLELN-VRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTV 299
Query: 145 VRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRS 204
V V ++Y C+R+ A +VFD+ R +D+ W + GY G ELF M +R+
Sbjct: 300 VSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERN 359
Query: 205 VVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHS 264
+VSWN M+ + +EAL M ++ D+ TLV +L VC+ + +G+ H
Sbjct: 360 IVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHG 419
Query: 265 YANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMP-MRNVVSWNAMISGMAYNGMG 323
+ G+ +++ V N+L+D Y KCG Q+ F +M +R+ VSWNA+++G+A G
Sbjct: 420 FIYRHGYDTNVI-VANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRS 478
Query: 324 EVGVGLFEDMVRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSM---AVKFQLLPKLEHY 380
E + FE M P+ T +LA CA+ ++ G+ + + K ++ +
Sbjct: 479 EQALSFFEGMQVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIR---- 534
Query: 381 GCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHG-DREIAEIAAKELVNVE 439
G +VD+ +C A+++ + LW +++ C +G +E+ E+
Sbjct: 535 GAMVDMYSKCRCFDYAIEVFKEAATRDL-ILWNSIIRGCCRNGRSKEVFEL--------- 584
Query: 440 PWNSGHHVLLSNIYAEEMRWDEVEKVRVL---MREGHIK 475
+LL N E ++ D V + +L +REGH++
Sbjct: 585 ------FMLLEN---EGVKPDHVTFLGILQACIREGHVE 614
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 171/412 (41%), Gaps = 82/412 (19%)
Query: 57 VPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLK 116
V A +F P + +N++I AC+ + + F +F M N + +F +LK
Sbjct: 112 VDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRM-NRDGVRATETSFAGVLK 170
Query: 117 AASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIV 176
+ + D +L + LH V G++ + + +V++Y C M DA +VFDE+ +
Sbjct: 171 SCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVS 230
Query: 177 WNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGF 236
WN++++ Y LE G +EA+V+F +MLE
Sbjct: 231 WNVIVRRY-----LEMGF--------------------------NDEAVVMFFKMLELNV 259
Query: 237 EPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKC------- 289
P + T+ +V+ C+R A +VG+ IH+ A + D V V S+ D Y KC
Sbjct: 260 RPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTV-VSTSVFDMYVKCDRLESAR 318
Query: 290 -------------------GNPQAGLS-----VFNEMPMRNVVSWNAMISGMAYNGMGEV 325
G +GL+ +F+ MP RN+VSWNAM+ G + +
Sbjct: 319 RVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDE 378
Query: 326 GVGLFEDMVRGVTPNDS-TFVGVLACCAHAGLVDRGREL--------FDSMAVKFQLLPK 376
+ M + + D+ T V +L C+ V G++ +D+ + L
Sbjct: 379 ALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANAL-- 436
Query: 377 LEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHGDREIA 428
+D+ G+CG ++ A R M W ALL+ G E A
Sbjct: 437 -------LDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQA 481
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 136/303 (44%), Gaps = 15/303 (4%)
Query: 174 VIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLE 233
+ + N I+ Y K G ++ ELF M +R SWN +I+ A+ +E +FR M
Sbjct: 96 IFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNR 155
Query: 234 KGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQ 293
G + + VL C + + +H G+ + V + S+VD Y KC
Sbjct: 156 DGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGN-VDLETSIVDVYGKCRVMS 214
Query: 294 AGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCA 352
VF+E+ + VSWN ++ G + V +F M+ V P + T V+ C+
Sbjct: 215 DARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACS 274
Query: 353 HAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHV---REALDLIRSMPMEP-T 408
+ ++ G+ + ++AVK ++ V D+ +C + R D RS ++ T
Sbjct: 275 RSLALEVGK-VIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWT 333
Query: 409 AALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVL 468
+A+ G +S T RE+ ++ + N+ WN+ +L ++A E WDE L
Sbjct: 334 SAMSGYAMSGL-TREARELFDLMPER--NIVSWNA---MLGGYVHAHE--WDEALDFLTL 385
Query: 469 MRE 471
MR+
Sbjct: 386 MRQ 388
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Query: 28 IHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPP 87
IH +R G I + + + YA VF + ++IL+NSII+ C +
Sbjct: 518 IHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGR 577
Query: 88 FQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTT 136
++ F LF L+ N + PD+ TF +L+A +LG + ++T
Sbjct: 578 SKEVFELFMLLEN-EGVKPDHVTFLGILQACIREGHVELGFQYFSSMST 625
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 193/414 (46%), Gaps = 44/414 (10%)
Query: 9 ERRILSLLHGAKTRTQLT---QIHAHFLRHGLHH--SNQILAHFISVCASLHRVPYATRV 63
ER + LL+ R + Q+H + ++ G+ + L +F + C L A R
Sbjct: 184 ERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGEL---TSALRA 240
Query: 64 FNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRD 123
F+ ++I + ++I ACS + +F M N + P+ FT S+LKA S +
Sbjct: 241 FDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFL-PNEFTVCSILKACSEEKA 299
Query: 124 FQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQG 183
+ G+ +H+ V M + DV V ++
Sbjct: 300 LRFGRQVHSLVV-------------------------------KRMIKTDVFVGTSLMDM 328
Query: 184 YCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATL 243
Y K GE+ ++F M +R+ V+W +I+ A+ EEA+ LFR M + ++ T+
Sbjct: 329 YAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTV 388
Query: 244 VTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMP 303
V++L C +GA +G+ +H+ K + V +G++LV YCKCG + +V ++P
Sbjct: 389 VSILRACGSVGALLLGKELHAQI-IKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP 447
Query: 304 MRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRE 362
R+VVSW AMISG + G + ++M++ GV PN T+ L CA++ + GR
Sbjct: 448 SRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRS 507
Query: 363 LFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALL 416
+ S+A K L + ++ + +CG V EA + SMP E W A++
Sbjct: 508 I-HSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMP-EKNLVSWKAMI 559
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 179/408 (43%), Gaps = 58/408 (14%)
Query: 46 HFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAIS 105
+ IS C L + YA +VF+ P N + + ++I + + L A A+
Sbjct: 122 NLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDG----------YLKYGLEDEAFALF 171
Query: 106 PDY------FT----FPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYAN 155
DY FT F LL S +F+LG+ +H + +G + V +V YA
Sbjct: 172 EDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQ 230
Query: 156 CERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCL 215
C + A + FD M E+DVI SW +IS
Sbjct: 231 CGELTSALRAFDMMEEKDVI-------------------------------SWTAVISAC 259
Query: 216 AKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDI 275
++ +A+ +F ML F P++ T+ ++L C+ A G +HS K ++
Sbjct: 260 SRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVV-KRMIKTD 318
Query: 276 VSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR 335
V VG SL+D Y KCG VF+ M RN V+W ++I+ A G GE + LF M R
Sbjct: 319 VFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKR 378
Query: 336 G-VTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVR 394
+ N+ T V +L C G + G+EL + +K + + +V L +CG R
Sbjct: 379 RHLIANNLTVVSILRACGSVGALLLGKEL-HAQIIKNSIEKNVYIGSTLVWLYCKCGESR 437
Query: 395 EALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVN--VEP 440
+A ++++ +P + W A++S C + G A KE++ VEP
Sbjct: 438 DAFNVLQQLPSRDVVS-WTAMISGCSSLGHESEALDFLKEMIQEGVEP 484
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 145/326 (44%), Gaps = 34/326 (10%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
Q+H+ ++ + + + + A + +VF+ N N + + SII A +
Sbjct: 305 QVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREG 364
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVR 146
++ LF +M+ R + + T S+L+A ++ LG+ LHAQ+
Sbjct: 365 FGEEAISLFRIMKR-RHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSI------- 416
Query: 147 VGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV 206
E++V + + ++ YCK GE + +++ R VV
Sbjct: 417 ------------------------EKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVV 452
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA 266
SW MIS + E EAL +EM+++G EP+ T + L CA + +G IHS A
Sbjct: 453 SWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIA 512
Query: 267 NDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVG 326
L ++ VG++L+ Y KCG VF+ MP +N+VSW AMI G A NG
Sbjct: 513 KKNHALSNVF-VGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREA 571
Query: 327 VGLFEDM-VRGVTPNDSTFVGVLACC 351
+ L M G +D F +L+ C
Sbjct: 572 LKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 125/259 (48%), Gaps = 9/259 (3%)
Query: 162 AGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKE 221
A K FD+ + + N +I ++G+L ++F M +++ V+W MI K E
Sbjct: 108 ALKCFDD---QVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLE 164
Query: 222 EEALVLFREMLEKGFE-PDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGN 280
+EA LF + ++ G ++ V +L +C+R ++G +H G IV +
Sbjct: 165 DEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVE--S 222
Query: 281 SLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTP 339
SLV FY +CG + L F+ M ++V+SW A+IS + G G +G+F M+ P
Sbjct: 223 SLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLP 282
Query: 340 NDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDL 399
N+ T +L C+ + GR++ S+ VK + + ++D+ +CG + + +
Sbjct: 283 NEFTVCSILKACSEEKALRFGRQV-HSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKV 341
Query: 400 IRSMPMEPTAALWGALLSA 418
M T W ++++A
Sbjct: 342 FDGMSNRNTVT-WTSIIAA 359
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 82/170 (48%), Gaps = 8/170 (4%)
Query: 262 IHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNG 321
IH+ A K F ++ GN+L+ + G+ VF+ MP +N V+W AMI G G
Sbjct: 104 IHAMAL-KCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYG 162
Query: 322 MGEVGVGLFEDMVR-GVT-PNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEH 379
+ + LFED V+ G+ N+ FV +L C+ + GR++ +M VK + L
Sbjct: 163 LEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNM-VKVG-VGNLIV 220
Query: 380 YGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSAC--RTHGDREI 427
+V +CG + AL M E W A++SAC + HG + I
Sbjct: 221 ESSLVYFYAQCGELTSALRAFDMME-EKDVISWTAVISACSRKGHGIKAI 269
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 165/391 (42%), Gaps = 37/391 (9%)
Query: 12 ILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAH--FISVCASLHRVPYATRVFNHSPN 69
IL +L K ++HAH L+ ++ Q H I + + RVF S
Sbjct: 322 ILPVLGDVKALKLGKEVHAHVLKSK-NYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQ 380
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQS 129
N I + +++ + + F Q M+ PD T ++L + LR + G+
Sbjct: 381 RNAISWTALMSGYAANGRFDQALRSIVWMQQ-EGFRPDVVTIATVLPVCAELRAIKQGKE 439
Query: 130 LHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGE 189
+H F + + ++ +Y+ C G
Sbjct: 440 IHCYALKNLFLPNVSLVTSLMVMYSKC-------------------------------GV 468
Query: 190 LETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPV 249
E + LF R+ R+V +W MI C + + +FR ML PD T+ VL V
Sbjct: 469 PEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTV 528
Query: 250 CARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVS 309
C+ L A +G+ +H + K F I V ++ Y KCG+ ++ F+ + ++ ++
Sbjct: 529 CSDLKALKLGKELHGHILKKEF-ESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLT 587
Query: 310 WNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMA 368
W A+I N + + FE MV RG TPN TF VL+ C+ AG VD F+ M
Sbjct: 588 WTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLML 647
Query: 369 VKFQLLPKLEHYGCVVDLLGRCGHVREALDL 399
+ L P EHY V++LL RCG V EA L
Sbjct: 648 RMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 185/411 (45%), Gaps = 53/411 (12%)
Query: 14 SLLHGAKTRTQLTQIHAHFLRHGLHHSNQIL----AHFISVCASLHRVPYATRVFNHSPN 69
SLLHG Q+H H +GL SN+ L H + C S V A +VF+ S +
Sbjct: 126 SLLHG-------KQVHVHIRINGLE-SNEFLRTKLVHMYTACGS---VKDAQKVFDESTS 174
Query: 70 PNIILFNSIIKACSLS--PPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLG 127
N+ +N++++ +S +Q F+ MR + + ++ ++ K+ + + G
Sbjct: 175 SNVYSWNALLRGTVISGKKRYQDVLSTFTEMREL-GVDLNVYSLSNVFKSFAGASALRQG 233
Query: 128 QSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKV 187
HA G ++ +V++Y C ++G A +VFDE+ ERD++VW MI G
Sbjct: 234 LKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAG---- 289
Query: 188 GELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREML-EKGFEPDDATLVTV 246
LA K++ EAL LFR M+ E+ P+ L T+
Sbjct: 290 ---------------------------LAHNKRQWEALGLFRTMISEEKIYPNSVILTTI 322
Query: 247 LPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRN 306
LPV + A +G+ +H++ + V + L+D YCKCG+ +G VF RN
Sbjct: 323 LPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRN 382
Query: 307 VVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFD 365
+SW A++SG A NG + + M + G P+ T VL CA + +G+E+
Sbjct: 383 AISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEI-H 441
Query: 366 SMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALL 416
A+K LP + ++ + +CG + L + A W A++
Sbjct: 442 CYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKA-WTAMI 491
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 176/382 (46%), Gaps = 37/382 (9%)
Query: 18 GAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNS 77
GA Q + HA +++GL +S + + + +V A RVF+ +I+++ +
Sbjct: 226 GASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGA 285
Query: 78 IIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQV-TT 136
+I + + + LF M + I P+ ++L +++ +LG+ +HA V +
Sbjct: 286 MIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKS 345
Query: 137 LGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLEL 196
+ V G+++LY C M +VF ++R+ I W ++ GY G + L
Sbjct: 346 KNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQAL-- 403
Query: 197 FRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAA 256
RS+V W M ++GF PD T+ TVLPVCA L A
Sbjct: 404 ------RSIV-W----------------------MQQEGFRPDVVTIATVLPVCAELRAI 434
Query: 257 DVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISG 316
G+ IH YA FL + VS+ SL+ Y KCG P+ + +F+ + RNV +W AMI
Sbjct: 435 KQGKEIHCYALKNLFLPN-VSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDC 493
Query: 317 MAYNGMGEVGVGLFEDMVRGVTPNDSTFVG-VLACCAHAGLVDRGRELFDSMAVK-FQLL 374
N G+ +F M+ DS +G VL C+ + G+EL + K F+ +
Sbjct: 494 YVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESI 553
Query: 375 PKLEHYGCVVDLLGRCGHVREA 396
P + ++ + G+CG +R A
Sbjct: 554 PFVS--ARIIKMYGKCGDLRSA 573
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 146/360 (40%), Gaps = 36/360 (10%)
Query: 66 HSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQ 125
HS NP II + I+ + + + + R I + TF +LL+A +
Sbjct: 72 HSKNPYII--HRDIQIFARQNNLEVALTILDYLEQ-RGIPVNATTFSALLEACVRRKSLL 128
Query: 126 LGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYC 185
G+ +H + G + +R +V +Y C + DA KVFDE +V WN +++G
Sbjct: 129 HGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRG-- 186
Query: 186 KVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVT 245
+ ++ K+ ++ L F EM E G + + +L
Sbjct: 187 ---------------------------TVISGKKRYQDVLSTFTEMRELGVDLNVYSLSN 219
Query: 246 VLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR 305
V A A G H+ A G + + SLVD Y KCG VF+E+ R
Sbjct: 220 VFKSFAGASALRQGLKTHALAIKNGLFNSVF-LKTSLVDMYFKCGKVGLARRVFDEIVER 278
Query: 306 NVVSWNAMISGMAYNGMGEVGVGLFEDMV--RGVTPNDSTFVGVLACCAHAGLVDRGREL 363
++V W AMI+G+A+N +GLF M+ + PN +L + G+E+
Sbjct: 279 DIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEV 338
Query: 364 FDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPTAALWGALLSACRTHG 423
+ + + + ++DL +CG + + + A W AL+S +G
Sbjct: 339 HAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYG-SKQRNAISWTALMSGYAANG 397
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 117/212 (55%), Gaps = 2/212 (0%)
Query: 230 EMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKC 289
E+L+KG PD V + CA L + + + +H + F D + N ++ + +C
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGD-PKLNNMVISMFGEC 284
Query: 290 GNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVL 348
+ VF+ M +++ SW+ M+ + NGMG+ + LFE+M + G+ PN+ TF+ V
Sbjct: 285 SSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVF 344
Query: 349 ACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEPT 408
CA G ++ FDSM + + PK EHY V+ +LG+CGH+ EA IR +P EPT
Sbjct: 345 LACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPT 404
Query: 409 AALWGALLSACRTHGDREIAEIAAKELVNVEP 440
A W A+ + R HGD ++ + + +V+V+P
Sbjct: 405 ADFWEAMRNYARLHGDIDLEDYMEELMVDVDP 436
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 64/150 (42%), Gaps = 31/150 (20%)
Query: 106 PDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKV 165
PD F L ++ +NL+ + + +H F + V+ ++ C + DA +V
Sbjct: 234 PDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRV 293
Query: 166 FDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEAL 225
FD M ++D+ W+LM+ Y G MGD +AL
Sbjct: 294 FDHMVDKDMDSWHLMMCAYSDNG-----------MGD--------------------DAL 322
Query: 226 VLFREMLEKGFEPDDATLVTVLPVCARLGA 255
LF EM + G +P++ T +TV CA +G
Sbjct: 323 HLFEEMTKHGLKPNEETFLTVFLACATVGG 352
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 6/216 (2%)
Query: 215 LAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRD 274
L K K EAL + + +KG+ D L+ + +C + A + +H
Sbjct: 87 LCKQVKIREALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCITPLD---- 142
Query: 275 IVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMV 334
+++++ Y C + L+VFNEMP RN +W MI +A NG GE + +F +
Sbjct: 143 -ARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFI 201
Query: 335 R-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHV 393
G P+ F V C G ++ G F+SM + ++ +E Y V+++L CGH+
Sbjct: 202 EEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHL 261
Query: 394 REALDLIRSMPMEPTAALWGALLSACRTHGDREIAE 429
EALD + M +EP+ +W L++ C G E+ +
Sbjct: 262 DEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGD 297
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 143/341 (41%), Gaps = 37/341 (10%)
Query: 50 VCASLHRVP---------YATRVFNHSPNPNIILFNSIIKACS--LSPP------FQQCF 92
VC+ + + P +R FN + ++ +I + L+ P F QC
Sbjct: 5 VCSRILKFPKPYLWSATQTTSRCFNSRAQSHNLITKTITSSLQDVLTRPIWQNRSFVQCR 64
Query: 93 HLFS---LMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGV 149
+ S ++ N ++++ + TF +L K ++ L + G+ P +G+
Sbjct: 65 RVSSYAQMVNNHQSVTIE--TFDALCKQVKIREALEVIDILEDK----GYIVDFPRLLGL 118
Query: 150 VELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWN 209
+L E + +A V D + D ++ +I+ Y + L +F M R+ +W
Sbjct: 119 AKLCGEVEALEEARVVHDCITPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWG 178
Query: 210 LMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWI---HSYA 266
MI CLAK + E A+ +F +E+G +PD V C +G D+ E + S
Sbjct: 179 TMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIG--DINEGLLHFESMY 236
Query: 267 NDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR-NVVSWNAMISGMAYNGMGEV 325
D G + + N +++ CG+ L M + +V W +++ G E+
Sbjct: 237 RDYGMVLSMEDYVN-VIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLEL 295
Query: 326 GVGLFEDMVRGVTP---NDSTFVGVLACCAHAGLVDRGREL 363
G F ++++ + + + G++A A +++ +EL
Sbjct: 296 G-DRFAELIKKLDASRMSKESNAGLVAAKASDSAMEKLKEL 335
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 133/282 (47%), Gaps = 19/282 (6%)
Query: 164 KVFDEMRE----RDVIVWNLMIQGYCKVGELETGLELFRRMGDR----SVVSWNLMISCL 215
+VFDEM R V + +I Y + G ET LEL RM + S++++N +I+
Sbjct: 162 EVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINAC 221
Query: 216 AKGKKEEEALV-LFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRD 274
A+G + E L+ LF EM +G +PD T T+L CA G D E + ND G + D
Sbjct: 222 ARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPD 281
Query: 275 IVSVGNSLVDFYCKCGNPQAGLSVFNEM----PMRNVVSWNAMISGMAYNGMGEVGVGLF 330
+ + + LV+ + K + + EM + ++ S+N ++ A +G + +G+F
Sbjct: 282 LTTYSH-LVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVF 340
Query: 331 EDM-VRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGR 389
M G TPN +T+ +L +G D R+LF M P Y ++++ G
Sbjct: 341 HQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSS-NTDPDAATYNILIEVFGE 399
Query: 390 CGHVREALDLIRSM---PMEPTAALWGALLSACRTHGDREIA 428
G+ +E + L M +EP + ++ AC G E A
Sbjct: 400 GGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDA 441
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 158/381 (41%), Gaps = 49/381 (12%)
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQS 129
P+I+ +N+++ AC++ + +F M N I PD T+ L++ LR +
Sbjct: 245 PDIVTYNTLLSACAIRGLGDEAEMVFRTM-NDGGIVPDLTTYSHLVETFGKLRRLEKVCD 303
Query: 130 LHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRER----DVIVWNLMIQGYC 185
L ++ + G ++E YA + +A VF +M+ + +++++ +
Sbjct: 304 LLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFG 363
Query: 186 KVGELETGLELFRRMG----DRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDA 241
+ G + +LF M D ++N++I +G +E + LF +M+E+ EPD
Sbjct: 364 QSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDME 423
Query: 242 TLVTVLPVCARLGAADVGEWIHSY--AND-----KGFLRDIVSVGN------SLVDFYCK 288
T ++ C + G + I Y AND K + I + G +LV F
Sbjct: 424 TYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTM 483
Query: 289 ---CGNP-------------QAGLSVFNEMPM---------RNVVSWNAMISGMAYNGMG 323
NP + GL +E + RN ++NA I G
Sbjct: 484 HEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKF 543
Query: 324 EVGVGLFEDMVRG-VTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGC 382
E V + DM + P++ T VL+ + A LVD RE F+ M +LP + Y
Sbjct: 544 EEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKAS-DILPSIMCYCM 602
Query: 383 VVDLLGRCGHVREALDLIRSM 403
++ + G+ + +L+ M
Sbjct: 603 MLAVYGKTERWDDVNELLEEM 623
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 106/214 (49%), Gaps = 4/214 (1%)
Query: 212 ISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGF 271
+ + + K ++A+ + + +G+ D L + +C A + +H +
Sbjct: 153 LDSICREGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVG 212
Query: 272 LRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFE 331
+ DI S NS+++ Y CG+ + L+VFN MP RN+ +W +I A NG GE + F
Sbjct: 213 ISDI-SAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFS 271
Query: 332 DMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRC 390
+ G P+ F + C G ++ G F+SM ++ ++P +EHY +V +L
Sbjct: 272 RFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEP 331
Query: 391 GHVREALDLIRSMPMEPTAALWGALLSACRTHGD 424
G++ EAL + S MEP LW L++ R HGD
Sbjct: 332 GYLDEALRFVES--MEPNVDLWETLMNLSRVHGD 363
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%)
Query: 173 DVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREML 232
D+ +N +I+ Y G +E L +F M +R++ +W +I C AK + E+A+ F
Sbjct: 215 DISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFK 274
Query: 233 EKGFEPDDATLVTVLPVCARLGAADVG 259
++G +PD + C LG + G
Sbjct: 275 QEGNKPDGEMFKEIFFACGVLGDMNEG 301
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 101/215 (46%), Gaps = 3/215 (1%)
Query: 223 EALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSL 282
EA+ + + KG+ D L+ + +C + A + +H D V N++
Sbjct: 102 EAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCD-VGARNAI 160
Query: 283 VDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPND 341
++ Y C + L VF EMP N + M+ NG GE + LF G PN
Sbjct: 161 IEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNG 220
Query: 342 STFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIR 401
F V + C G V G F +M ++ ++P +EHY V +L GH+ EAL+ +
Sbjct: 221 EIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVE 280
Query: 402 SMPMEPTAALWGALLSACRTHGDREIAEIAAKELV 436
MPMEP+ +W L++ R HGD E+ + A ELV
Sbjct: 281 RMPMEPSVDVWETLMNLSRVHGDVELGDRCA-ELV 314
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 132/288 (45%), Gaps = 16/288 (5%)
Query: 71 NIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSL 130
+++++N+II F LF+ M + I PD FT+ L+ N + L
Sbjct: 249 DVVIYNTIIDGLCKYKHMDDAFDLFNKME-TKGIKPDVFTYNPLISCLCNYGRWSDASRL 307
Query: 131 HAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRER-----DVIVWNLMIQGYC 185
+ + +++ + ++ +A K++DEM + DV+ +N +I+G+C
Sbjct: 308 LSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFC 367
Query: 186 KVGELETGLELFRRMGDR----SVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDA 241
K +E G+E+FR M R + V++ +I + + + A ++F++M+ G PD
Sbjct: 368 KYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIM 427
Query: 242 TLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNE 301
T +L G + + Y + DIV+ ++++ CK G + G +F
Sbjct: 428 TYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTY-TTMIEALCKAGKVEDGWDLFCS 486
Query: 302 MPMR----NVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTF 344
+ ++ NVV++ M+SG G+ E LF +M G PN T+
Sbjct: 487 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTY 534
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 168/400 (42%), Gaps = 31/400 (7%)
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLL---------KAASN 120
P+I+ NS++ + L M PD TF +L+ A
Sbjct: 143 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEM-GYQPDTVTFTTLVHGLFQHNKASEAVA 201
Query: 121 LRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLM 180
L + + + + T G +G + G +L N + GK+ E DV+++N +
Sbjct: 202 LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKI-----EADVVIYNTI 256
Query: 181 IQGYCKVGELETGLELFRRMGDR----SVVSWNLMISCLAKGKKEEEALVLFREMLEKGF 236
I G CK ++ +LF +M + V ++N +ISCL + +A L +MLEK
Sbjct: 257 IDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNI 316
Query: 237 EPDDATLVTVLPVCARLGAADVGEWIHS-YANDKGFLRDIVSVGNSLVDFYCKCGNPQAG 295
PD ++ + G E ++ K D+V+ N+L+ +CK + G
Sbjct: 317 NPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAY-NTLIKGFCKYKRVEEG 375
Query: 296 LSVFNEMPMR----NVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLAC 350
+ VF EM R N V++ +I G + +F+ MV GV P+ T+ +L
Sbjct: 376 MEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDG 435
Query: 351 CAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPM---EP 407
+ G V+ +F+ M K + + Y +++ L + G V + DL S+ + +P
Sbjct: 436 LCNNGNVETALVVFEYMQ-KRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKP 494
Query: 408 TAALWGALLSACRTHGDREIAEIAAKELVNVEPW-NSGHH 446
+ ++S G +E A+ E+ P NSG +
Sbjct: 495 NVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTY 534
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 131/319 (41%), Gaps = 43/319 (13%)
Query: 94 LFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELY 153
LF M +R P F LL A + + F L SL Q+ LG + + LY
Sbjct: 62 LFGDMVKSRPF-PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHN---------LY 111
Query: 154 ANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDR----SVVSWN 209
+++ I +C+ +L L + +M S+V+ N
Sbjct: 112 T----------------------YSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLN 149
Query: 210 LMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDK 269
+++ G + EA+ L +M+E G++PD T T++ + A + K
Sbjct: 150 SLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK 209
Query: 270 GFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPM----RNVVSWNAMISGMAYNGMGEV 325
G D+V+ G ++++ CK G P L++ N+M +VV +N +I G+ +
Sbjct: 210 GCQPDLVTYG-AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDD 268
Query: 326 GVGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVV 384
LF M +G+ P+ T+ +++C + G L M K + P L + ++
Sbjct: 269 AFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEK-NINPDLVFFNALI 327
Query: 385 DLLGRCGHVREALDLIRSM 403
D + G + EA L M
Sbjct: 328 DAFVKEGKLVEAEKLYDEM 346
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 104/242 (42%), Gaps = 9/242 (3%)
Query: 69 NPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQ 128
NP+++ FN++I A + L+ M ++ PD + +L+K + + G
Sbjct: 317 NPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGM 376
Query: 129 SLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRER----DVIVWNLMIQGY 184
+ +++ G + ++ + +A VF +M D++ +N+++ G
Sbjct: 377 EVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGL 436
Query: 185 CKVGELETGLELFRRMGDR----SVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDD 240
C G +ET L +F M R +V++ MI L K K E+ LF + KG +P+
Sbjct: 437 CNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNV 496
Query: 241 ATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFN 300
T T++ R G + + + + G L + N+L+ + G+ A +
Sbjct: 497 VTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPN-SGTYNTLIRARLRDGDEAASAELIK 555
Query: 301 EM 302
EM
Sbjct: 556 EM 557
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 137/311 (44%), Gaps = 43/311 (13%)
Query: 61 TRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKA--- 117
T + N PN++ +NS+I+ + L S M R I+P+ TF +L+ A
Sbjct: 279 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE-RKINPNVVTFSALIDAFVK 337
Query: 118 ------ASNLRDFQLGQSLHAQVTTL-----GFARHGPVRVGVVELYANCERMGDAGKVF 166
A L D + +S+ + T GF H +R+ +A +F
Sbjct: 338 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH--------------DRLDEAKHMF 383
Query: 167 DEMRERD----VIVWNLMIQGYCKVGELETGLELFRRMGDR----SVVSWNLMISCLAKG 218
+ M +D V+ +N +I+G+CK +E G+ELFR M R + V++N +I L +
Sbjct: 384 ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQA 443
Query: 219 KKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSV 278
+ A +F++M+ G PD T +L + G + + Y DI +
Sbjct: 444 GDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTY 503
Query: 279 GNSLVDFYCKCGNPQAGLSVFNEMPMR----NVVSWNAMISGMAYNGMGEVGVGLFEDMV 334
N +++ CK G + G +F + ++ NV+ + MISG G+ E LF +M
Sbjct: 504 -NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Query: 335 R-GVTPNDSTF 344
G PN T+
Sbjct: 563 EDGTLPNSGTY 573
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 139/336 (41%), Gaps = 45/336 (13%)
Query: 68 PNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLG 127
P P+I+ FN ++ A + F L M+N R IS D +++ L+ L
Sbjct: 76 PLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLR-ISYDLYSYNILINCFCRRSQLPLA 134
Query: 128 QSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKV 187
++ ++ LG+ E D++ + ++ GYC
Sbjct: 135 LAVLGKMMKLGY-------------------------------EPDIVTLSSLLNGYCHG 163
Query: 188 GELETGLELFRRM----GDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATL 243
+ + L +M + V++N +I L K EA+ L M+ +G +PD T
Sbjct: 164 KRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTY 223
Query: 244 VTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMP 303
TV+ + G D+ + +KG + V + +++D C N L++F EM
Sbjct: 224 GTVVNGLCKRGDIDLALSLLK-KMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMD 282
Query: 304 MR----NVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVD 358
+ NVV++N++I + G L DM+ R + PN TF ++ G +
Sbjct: 283 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 342
Query: 359 RGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVR 394
+L+D M +K + P + Y +++ G C H R
Sbjct: 343 EAEKLYDEM-IKRSIDPDIFTYSSLIN--GFCMHDR 375
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 96/196 (48%), Gaps = 11/196 (5%)
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQS 129
PN++ +N++IK + ++ LF M + R + + T+ +L++ D + Q
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREM-SQRGLVGNTVTYNTLIQGLFQAGDCDMAQK 451
Query: 130 LHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMR----ERDVIVWNLMIQGYC 185
+ ++ + G +++ ++ A VF+ ++ E D+ +N+MI+G C
Sbjct: 452 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMC 511
Query: 186 KVGELETGLELFRRMGDR----SVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDA 241
K G++E G +LF + + +V+ + MIS + +EEA LFREM E G P+
Sbjct: 512 KAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSG 571
Query: 242 TLVTVLPVCARLGAAD 257
T T++ ARL D
Sbjct: 572 TYNTLIR--ARLRDGD 585
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 118/278 (42%), Gaps = 45/278 (16%)
Query: 158 RMGDAGKVFDEMRER----DVIVWNLMIQGYCKVGELETGLELFRRMGDRSV----VSWN 209
++ DA +F EM + ++ +N ++ K+ + + + L RM + + S+N
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 210 LMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDK 269
++I+C + + AL + +M++ G+EPD TL ++L + Y + K
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLL---------------NGYCHGK 164
Query: 270 GFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGL 329
+S +LVD + V P N V++N +I G+ + V L
Sbjct: 165 R-----ISEAVALVD----------QMFVMEYQP--NTVTFNTLIHGLFLHNKASEAVAL 207
Query: 330 FEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLG 388
+ MV RG P+ T+ V+ G +D L M K ++ + Y ++D L
Sbjct: 208 IDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME-KGKIEADVVIYTTIIDALC 266
Query: 389 RCGHVREALDLIRSMP---MEPTAALWGALLSACRTHG 423
+V +AL+L M + P + +L+ +G
Sbjct: 267 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 304
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 157/347 (45%), Gaps = 16/347 (4%)
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQS 129
P ++++N+II A +LF+ M N + I P+ T+ SL++ N +
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDALNLFTEMDN-KGIRPNVVTYNSLIRCLCNYGRWSDASR 312
Query: 130 LHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRER----DVIVWNLMIQGYC 185
L + + + +++ + ++ +A K++DEM +R D+ ++ +I G+C
Sbjct: 313 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 372
Query: 186 KVGELETGLELFRRMGDR----SVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDA 241
L+ +F M + +VV++N +I K K+ +E + LFREM ++G +
Sbjct: 373 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV 432
Query: 242 TLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNE 301
T T++ + D + + G L DI++ + L+D C G + L VF
Sbjct: 433 TYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTY-SILLDGLCNNGKVETALVVFEY 491
Query: 302 MPMR----NVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGL 356
+ ++ ++N MI GM G E G LF + ++GV PN T+ +++ GL
Sbjct: 492 LQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGL 551
Query: 357 VDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSM 403
+ LF M + LP Y ++ R G + +LIR M
Sbjct: 552 KEEADALFREMKEEGP-LPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 43/311 (13%)
Query: 61 TRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKA--- 117
T + N PN++ +NS+I+ + L S M R I+P+ TF +L+ A
Sbjct: 280 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE-RKINPNVVTFSALIDAFVK 338
Query: 118 ------ASNLRDFQLGQSLHAQVTTL-----GFARHGPVRVGVVELYANCERMGDAGKVF 166
A L D + +S+ + T GF H +R+ +A +F
Sbjct: 339 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH--------------DRLDEAKHMF 384
Query: 167 DEMRERD----VIVWNLMIQGYCKVGELETGLELFRRMGDR----SVVSWNLMISCLAKG 218
+ M +D V+ +N +I+G+CK ++ G+ELFR M R + V++ +I +
Sbjct: 385 ELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 444
Query: 219 KKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSV 278
++ + A ++F++M+ G PD T +L G + + Y DI +
Sbjct: 445 RECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTY 504
Query: 279 GNSLVDFYCKCGNPQAGLSVFNEMPMR----NVVSWNAMISGMAYNGMGEVGVGLFEDMV 334
N +++ CK G + G +F + ++ NVV++ M+SG G+ E LF +M
Sbjct: 505 -NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMK 563
Query: 335 -RGVTPNDSTF 344
G P+ T+
Sbjct: 564 EEGPLPDSGTY 574
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 138/315 (43%), Gaps = 18/315 (5%)
Query: 93 HLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVEL 152
+LF M +R P F LL A + + F L SL Q+ LG + + ++
Sbjct: 67 NLFGDMVKSRPF-PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINC 125
Query: 153 YANCERMGDAGKVFDEM----RERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSV--- 205
+ ++ A V +M E D++ N ++ G+C + + L +M +
Sbjct: 126 FCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPD 185
Query: 206 -VSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHS 264
++N +I L + + EA+ L M+ KG +PD T V+ + G D+ +
Sbjct: 186 SFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLK 245
Query: 265 YANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR----NVVSWNAMISGMAYN 320
++G + V + N+++D C N L++F EM + NVV++N++I +
Sbjct: 246 KM-EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304
Query: 321 GMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEH 379
G L DM+ R + PN TF ++ G + +L+D M +K + P +
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM-IKRSIDPDIFT 363
Query: 380 YGCVVDLLGRCGHVR 394
Y +++ G C H R
Sbjct: 364 YSSLIN--GFCMHDR 376
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 145/325 (44%), Gaps = 43/325 (13%)
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKA---------ASN 120
PN++ ++S+I + L S M R I+PD FTF +L+ A A
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIE-RKINPDVFTFSALIDAFVKEGKLVEAEK 347
Query: 121 LRDFQLGQSLHAQVTTL-----GFARHGPVRVGVVELYANCERMGDAGKVFDEMRER--- 172
L D + +S+ + T GF H +R+ +A ++F+ M +
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLINGFCMH--------------DRLDEAKQMFEFMVSKHCF 393
Query: 173 -DVIVWNLMIQGYCKVGELETGLELFRRMGDR----SVVSWNLMISCLAKGKKEEEALVL 227
DV+ +N +I+G+CK +E G+E+FR M R + V++N++I L + + A +
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 228 FREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYC 287
F+EM+ G P+ T T+L + G + + Y + + + N +++ C
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ-RSKMEPTIYTYNIMIEGMC 512
Query: 288 KCGNPQAGLSVFNEMPMR----NVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDS 342
K G + G +F + ++ +VV++N MISG G E LF++M G PN
Sbjct: 513 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSG 572
Query: 343 TFVGVLACCAHAGLVDRGRELFDSM 367
+ ++ G + EL M
Sbjct: 573 CYNTLIRARLRDGDREASAELIKEM 597
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 143/325 (44%), Gaps = 24/325 (7%)
Query: 94 LFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELY 153
LF M +R P F LL A + + F + SL Q+ LG + ++ +
Sbjct: 68 LFGEMVKSRPF-PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCF 126
Query: 154 ANCER------MGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRM----GDR 203
C R + GK+ E +++ + ++ GYC + + L +M
Sbjct: 127 --CRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 204 SVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIH 263
+ V++N +I L K EA+ L M+ KG +PD T V+ + G D+ +
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
Query: 264 SYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR----NVVSWNAMISGMAY 319
+ ++G L V + N+++D CK + L++F EM + NVV+++++IS +
Sbjct: 245 NKM-EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 303
Query: 320 NGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLE 378
G L DM+ R + P+ TF ++ G + +L+D M VK + P +
Sbjct: 304 YGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM-VKRSIDPSIV 362
Query: 379 HYGCVVDLLGRCGHVREALDLIRSM 403
Y +++ G C H R LD + M
Sbjct: 363 TYSSLIN--GFCMHDR--LDEAKQM 383
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/445 (19%), Positives = 171/445 (38%), Gaps = 89/445 (20%)
Query: 68 PNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLG 127
P P+II F+ ++ A + F L M+N I +++T+ L+ L
Sbjct: 77 PFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL-GIPHNHYTYSILINCFCRRSQLPLA 135
Query: 128 QSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMR----------------- 170
++ ++ LG+ + ++ Y + +R+ +A + D+M
Sbjct: 136 LAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHG 195
Query: 171 ----------------------ERDVIVWNLMIQGYCKVGELETGLELFRRMG----DRS 204
+ D++ + +++ G CK G+ + L +M +
Sbjct: 196 LFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPG 255
Query: 205 VVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHS 264
V+ +N +I L K K ++AL LF+EM KG P+ T +++ G + S
Sbjct: 256 VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 315
Query: 265 YANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR------------------- 305
++ D+ + ++L+D + K G +++EM R
Sbjct: 316 DMIERKINPDVFTF-SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH 374
Query: 306 --------------------NVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTF 344
+VV++N +I G E G+ +F +M RG+ N T+
Sbjct: 375 DRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 434
Query: 345 VGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREAL---DLIR 401
++ AG D +E+F M V + P + Y ++D L + G + +A+ + ++
Sbjct: 435 NILIQGLFQAGDCDMAQEIFKEM-VSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493
Query: 402 SMPMEPTAALWGALLSACRTHGDRE 426
MEPT + ++ G E
Sbjct: 494 RSKMEPTIYTYNIMIEGMCKAGKVE 518
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 100/218 (45%), Gaps = 9/218 (4%)
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQS 129
P+++ +N++IK ++ +F M + R + + T+ L++ D + Q
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREM-SQRGLVGNTVTYNILIQGLFQAGDCDMAQE 452
Query: 130 LHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMR----ERDVIVWNLMIQGYC 185
+ ++ + G + +++ ++ A VF+ ++ E + +N+MI+G C
Sbjct: 453 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 512
Query: 186 KVGELETGLELFRRMGDR----SVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDA 241
K G++E G +LF + + VV++N MIS + +EEA LF+EM E G P+
Sbjct: 513 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSG 572
Query: 242 TLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVG 279
T++ R G + + GF D ++G
Sbjct: 573 CYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG 610
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 85/166 (51%), Gaps = 1/166 (0%)
Query: 276 VSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR 335
+S + L++ Y CG SVF +M +N+ +W +I A NG GE + +F
Sbjct: 289 LSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKE 348
Query: 336 -GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVR 394
G P+ F G+ C G VD G F+SM+ + + P +E Y +V++ G +
Sbjct: 349 EGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLD 408
Query: 395 EALDLIRSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVNVEP 440
EAL+ + MPMEP +W L++ R HG+ E+ + A+ + ++P
Sbjct: 409 EALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDP 454
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 11/170 (6%)
Query: 163 GKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEE 222
GK+ + D+ +++++ Y G +F +M ++++ +W ++I C AK E
Sbjct: 278 GKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGE 337
Query: 223 EALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIH--SYANDKGF---LRDIVS 277
+A+ +F E+G PD + C LG D G +H S + D G + D V
Sbjct: 338 DAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEG-LLHFESMSRDYGIAPSIEDYV- 395
Query: 278 VGNSLVDFYCKCGNPQAGLSVFNEMPMR-NVVSWNAMISGMAYNGMGEVG 326
SLV+ Y G L MPM NV W +++ +G E+G
Sbjct: 396 ---SLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELG 442
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 184/411 (44%), Gaps = 59/411 (14%)
Query: 49 SVCASLHRVPYATRVFNH--SPN--PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAI 104
S+C S ++ A +V N S N P +I + +I+A L + L M +R +
Sbjct: 202 SLC-SRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEML-SRGL 259
Query: 105 SPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGK 164
PD FT+ ++++ G + G V E+ N E G
Sbjct: 260 KPDMFTYNTIIR---------------------GMCKEGMVDRAF-EMVRNLELKG---- 293
Query: 165 VFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRM----GDRSVVSWNLMISCLAKGKK 220
E DVI +N++++ G+ E G +L +M D +VV+++++I+ L + K
Sbjct: 294 -----CEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGK 348
Query: 221 EEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVG-EWIHSYANDKGFLRDIVSVG 279
EEA+ L + M EKG PD + ++ R G DV E++ + +D G L DIV+
Sbjct: 349 IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD-GCLPDIVNY- 406
Query: 280 NSLVDFYCKCGNPQAGLSVFNEMP----MRNVVSWNAMISGMAYNGMGEVGVGL-FEDMV 334
N+++ CK G L +F ++ N S+N M S + +G + + E M
Sbjct: 407 NTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMS 466
Query: 335 RGVTPNDSTFVGVLACCAHAGLVDRGRELF-DSMAVKFQLLPKLEHYGCVVDLLGRCG-- 391
G+ P++ T+ +++C G+VD EL D + +F P + Y V LLG C
Sbjct: 467 NGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFH--PSVVTYNIV--LLGFCKAH 522
Query: 392 HVREALDLIRSM---PMEPTAALWGALLSACRTHGDREIAEIAAKELVNVE 439
+ +A++++ SM P + L+ G R A A +LV ++
Sbjct: 523 RIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRID 573
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 186/435 (42%), Gaps = 36/435 (8%)
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQS 129
P++I +N +I + + M ++SPD T+ ++L++ + +L Q+
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRM----SVSPDVVTYNTILRSLCD--SGKLKQA 223
Query: 130 LHAQVTTLGFARHGPVRVGVVELYANCER--MGDAGKVFDEMRER----DVIVWNLMIQG 183
+ L + V + + A C +G A K+ DEMR+R DV+ +N+++ G
Sbjct: 224 MEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNG 283
Query: 184 YCKVGELETGLELFRRMGDR----SVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPD 239
CK G L+ ++ M +V++ N+++ + + +A L +ML KGF P
Sbjct: 284 ICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPS 343
Query: 240 DATLVTVLPVCARLG----AADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAG 295
T ++ R G A D+ E + + L N L+ +CK
Sbjct: 344 VVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS-----YNPLLHGFCKEKKMDRA 398
Query: 296 LSVFNEMPMR----NVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLAC 350
+ M R ++V++N M++ + +G E V + + +G +P T+ V+
Sbjct: 399 IEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDG 458
Query: 351 CAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDL---IRSMPMEP 407
A AG + +L D M K L P Y +V L R G V EA+ M + P
Sbjct: 459 LAKAGKTGKAIKLLDEMRAK-DLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRP 517
Query: 408 TAALWGA-LLSACRT-HGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKV 465
A + + +L C++ DR I + +P + + +L+ + E M + +E +
Sbjct: 518 NAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELL 577
Query: 466 RVLMREGHIKKVPGQ 480
L +G +KK +
Sbjct: 578 NELCNKGLMKKSSAE 592
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 83/186 (44%), Gaps = 6/186 (3%)
Query: 222 EEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNS 281
EE M+ G PD T++ RLG I G + D+++ N
Sbjct: 119 EEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITY-NV 177
Query: 282 LVDFYCKCGNPQAGLSVFNEMPMR-NVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTP 339
++ YCK G LSV + M + +VV++N ++ + +G + + + + M+ R P
Sbjct: 178 MISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYP 237
Query: 340 NDSTFVGVL-ACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALD 398
+ T+ ++ A C +G V +L D M + P + Y +V+ + + G + EA+
Sbjct: 238 DVITYTILIEATCRDSG-VGHAMKLLDEMRDR-GCTPDVVTYNVLVNGICKEGRLDEAIK 295
Query: 399 LIRSMP 404
+ MP
Sbjct: 296 FLNDMP 301
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 157/343 (45%), Gaps = 30/343 (8%)
Query: 130 LHAQVTTLGFARHGPVRVGVVELYAN--CER--MGDAGKVFDEMRERD----VIVWNLMI 181
+ ++ GF P+ V V + N C+ + DA KVFDE+ +R V+ +N +I
Sbjct: 227 FYMEILDAGF----PLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLI 282
Query: 182 QGYCKVGELETGLELFRRMGDR----SVVSWNLMISCLAKGKKEEEALVLFREMLEKGFE 237
GYCKVG L+ G L +M V +++ +I+ L K K + A LF EM ++G
Sbjct: 283 NGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLI 342
Query: 238 PDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLS 297
P+D T++ +R G D+ + + KG DIV + N+LV+ +CK G+ A +
Sbjct: 343 PNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIV-LYNTLVNGFCKNGDLVAARN 401
Query: 298 VFNEMPMRNV----VSWNAMISGMAYNGMGEVGVGLFEDMVRGVTPNDSTFVGVLAC--C 351
+ + M R + +++ +I G G E + + ++M + D L C C
Sbjct: 402 IVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMC 461
Query: 352 AHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPME---PT 408
++D R L + + + P Y ++D + G + L++ M + P+
Sbjct: 462 KEGRVIDAERALREMLRAGIK--PDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPS 519
Query: 409 AALWGALLSACRTHGDREIAEIAAKELVN--VEPWNSGHHVLL 449
+ LL+ G + A++ ++N V P + ++ LL
Sbjct: 520 VVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL 562
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 15/189 (7%)
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQS 129
P+I+L+N+++ + ++ M R + PD T+ +L+ D +
Sbjct: 378 PDIVLYNTLVNGFCKNGDLVAARNIVDGMIR-RGLRPDKITYTTLIDGFCRGGDVETALE 436
Query: 130 LHAQVTTLGFARHGPVRVGVVELYAN-CE--RMGDAGKVFDEMR----ERDVIVWNLMIQ 182
+ ++ G RVG L C+ R+ DA + EM + D + + +M+
Sbjct: 437 IRKEMDQNGIELD---RVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMD 493
Query: 183 GYCKVGELETGLELFRRMGDR----SVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEP 238
+CK G+ +TG +L + M SVV++N++++ L K + + A +L ML G P
Sbjct: 494 AFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVP 553
Query: 239 DDATLVTVL 247
DD T T+L
Sbjct: 554 DDITYNTLL 562
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 163/389 (41%), Gaps = 65/389 (16%)
Query: 60 ATRVFN----HSPNPNIILFNSIIKACSLSP-PFQQCFHLFSLMRNARAISPDYFTFPSL 114
A VFN + PN++ +N++I AC F+Q F M+ + PD TF SL
Sbjct: 287 AISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQR-NGVQPDRITFNSL 345
Query: 115 LKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMR---- 170
L S R G+ E N +FDEM
Sbjct: 346 LAVCS--------------------------RGGLWEAARN---------LFDEMTNRRI 370
Query: 171 ERDVIVWNLMIQGYCKVGELETGLELFRRMGDR----SVVSWNLMISCLAKGKKEEEALV 226
E+DV +N ++ CK G+++ E+ +M + +VVS++ +I AK + +EAL
Sbjct: 371 EQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALN 430
Query: 227 LFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFY 286
LF EM G D + T+L + ++G ++ I G +D+V+ N+L+ Y
Sbjct: 431 LFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTY-NALLGGY 489
Query: 287 CKCGNPQAGLSVFNEMP----MRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRGVTPNDS 342
K G VF EM + N+++++ +I G + G+ + + +F + D
Sbjct: 490 GKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADV 549
Query: 343 TFVGVL--ACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLI 400
L A C + GLV L D M K + P + Y ++D GR + + D
Sbjct: 550 VLYSALIDALCKN-GLVGSAVSLIDEM-TKEGISPNVVTYNSIIDAFGRSATMDRSADYS 607
Query: 401 R--SMPMEPTAALWGALLSACRTHGDREI 427
S+P + AL + T G+R I
Sbjct: 608 NGGSLPFSSS-----ALSALTETEGNRVI 631
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 47/274 (17%)
Query: 246 VLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMP-- 303
++ R G + + I A G+ + V ++L+ Y + G + +SVFN M
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGY-GNTVYAFSALISAYGRSGLHEEAISVFNSMKEY 297
Query: 304 -MR-NVVSWNAMISGMAYNGMGEVGVG-LFEDMVR-GVTPNDSTFVGVLACCAHAGLVDR 359
+R N+V++NA+I GM V F++M R GV P+ TF +LA C+ GL +
Sbjct: 298 GLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEA 357
Query: 360 GRELFDSMA-------------------------VKFQLL---------PKLEHYGCVVD 385
R LFD M + F++L P + Y V+D
Sbjct: 358 ARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVID 417
Query: 386 LLGRCGHVREALDL---IRSMPMEPTAALWGALLSACRTHGDREIAEIAAKEL--VNVEP 440
+ G EAL+L +R + + + LLS G E A +E+ V ++
Sbjct: 418 GFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKK 477
Query: 441 WNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHI 474
++ LL Y ++ ++DEV+KV M+ H+
Sbjct: 478 DVVTYNALLGG-YGKQGKYDEVKKVFTEMKREHV 510
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 157/347 (45%), Gaps = 20/347 (5%)
Query: 93 HLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVEL 152
LF M +R + P F L A + + ++L +L Q+ + G A ++
Sbjct: 74 DLFRDMIQSRPL-PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINC 132
Query: 153 YANCERMGDA----GKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDR----S 204
+ C ++ A GK+ E D +++N ++ G C + LEL RM + +
Sbjct: 133 FCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPT 192
Query: 205 VVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHS 264
+++ N +++ L K +A+VL M+E GF+P++ T VL V + G + +
Sbjct: 193 LITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLR 252
Query: 265 YANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR----NVVSWNAMISGMAYN 320
++ D V + ++D CK G+ ++FNEM ++ +++++N +I G
Sbjct: 253 KMEERNIKLDAVKY-SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311
Query: 321 GMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEH 379
G + G L DM+ R ++PN TF ++ G + +L M ++ + P
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEM-MQRGIAPNTIT 370
Query: 380 YGCVVDLLGRCGHVREAL---DLIRSMPMEPTAALWGALLSA-CRTH 422
Y ++D + + EA+ DL+ S +P + L++ C+ +
Sbjct: 371 YNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKAN 417
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 111/260 (42%), Gaps = 22/260 (8%)
Query: 102 RAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGD 161
R ISP+ TF L+ + + L ++ G A + +++ + R+ +
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEE 386
Query: 162 AGKVFDEMRER----DVIVWNLMIQGYCKVGELETGLELFRRMGDRSV----VSWNLMIS 213
A ++ D M + D++ +N++I GYCK ++ GLELFR M R V V++N ++
Sbjct: 387 AIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQ 446
Query: 214 CLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSY----ANDK 269
+ K E A LF+EM+ + PD + +L G D GE + +K
Sbjct: 447 GFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLD-----GLCDNGELEKALEIFGKIEK 501
Query: 270 GFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVV----SWNAMISGMAYNGMGEV 325
+ + + ++ C +F +P++ V ++N MIS +
Sbjct: 502 SKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSK 561
Query: 326 GVGLFEDMV-RGVTPNDSTF 344
LF M G P++ T+
Sbjct: 562 ADILFRKMTEEGHAPDELTY 581
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 102/255 (40%), Gaps = 50/255 (19%)
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQS 129
PN I +NS+I ++ + LM ++ PD TF L+ G
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMI-SKGCDPDIMTFNILINGYCKANRIDDGLE 424
Query: 130 LHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRER----DVIVWNLMIQGYC 185
L +++ G + +V+ + ++ A K+F EM R D++ + +++ G C
Sbjct: 425 LFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLC 484
Query: 186 KVGELETGLELFRR-------------------MGDRSVV-------------------- 206
GELE LE+F + M + S V
Sbjct: 485 DNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDAR 544
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAAD---VGEWIH 263
++N+MIS L + +A +LFR+M E+G PD+ T ++ A LG D E I
Sbjct: 545 AYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIR--AHLGDDDATTAAELIE 602
Query: 264 SYANDKGFLRDIVSV 278
+ GF D+ +V
Sbjct: 603 EMKS-SGFPADVSTV 616
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 94/435 (21%), Positives = 186/435 (42%), Gaps = 39/435 (8%)
Query: 27 QIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSP 86
Q+ + + H ++ N ++ F C + +V P+ FN++IK L
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 172
Query: 87 PFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLG---------QSLHAQVTTL 137
+ L M PD T+ S++ D L +++ A V T
Sbjct: 173 KVSEAVVLVDRMVE-NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231
Query: 138 GFARHGPVRVGVVELYANCERMGDAGKVFDEMRER----DVIVWNLMIQGYCKVGELETG 193
R G ++ A +F EM + V+ +N +++G CK G+ G
Sbjct: 232 STIIDSLCRDGCIDA---------AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDG 282
Query: 194 LELFRRMGDR----SVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLP- 248
L + M R +V+++N+++ K K +EA L++EM+ +G P+ T T++
Sbjct: 283 ALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDG 342
Query: 249 VCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR--- 305
C + ++ + +K DIV+ SL+ YC G+ VF + R
Sbjct: 343 YCMQNRLSEANNMLDLMVRNKCS-PDIVTF-TSLIKGYCMVKRVDDGMKVFRNISKRGLV 400
Query: 306 -NVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGREL 363
N V+++ ++ G +G ++ LF++MV GV P+ T+ +L G +++ E+
Sbjct: 401 ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI 460
Query: 364 FDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMP---MEPTAALWGALLSACR 420
F+ + K ++ + Y +++ + + G V +A +L S+P ++P + ++S
Sbjct: 461 FEDLQ-KSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLC 519
Query: 421 THGDREIAEIAAKEL 435
G A I +++
Sbjct: 520 KKGSLSEANILLRKM 534
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 135/291 (46%), Gaps = 23/291 (7%)
Query: 71 NIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSL 130
+++ +NS+++ + + L M +R I P+ TF LL Q L
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMV-SREIVPNVITFNVLLDVFVKEGKLQEANEL 320
Query: 131 HAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEM-RER---DVIVWNLMIQGYCK 186
+ ++ T G + + +++ Y R+ +A + D M R + D++ + +I+GYC
Sbjct: 321 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCM 380
Query: 187 VGELETGLELFRRMGDR----SVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDAT 242
V ++ G+++FR + R + V++++++ + K + A LF+EM+ G PD T
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440
Query: 243 LVTVLPVCARLG----AADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSV 298
+L G A ++ E + D G + + ++++ CK G + ++
Sbjct: 441 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLG-----IVMYTTIIEGMCKGGKVEDAWNL 495
Query: 299 FNEMPMR----NVVSWNAMISGMAYNG-MGEVGVGLFEDMVRGVTPNDSTF 344
F +P + NV+++ MISG+ G + E + L + G PND T+
Sbjct: 496 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 155/348 (44%), Gaps = 20/348 (5%)
Query: 92 FHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVE 151
LF M ++R + P F L A + + + L +L Q+ G A + ++
Sbjct: 73 IDLFRDMIHSRPL-PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMIN 131
Query: 152 LYANCERMGDA----GKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDR---- 203
+ C ++ A GK+ E + I ++ +I G C G + LEL RM +
Sbjct: 132 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 191
Query: 204 SVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIH 263
+++ N +++ L KE EA++L +M+E G +P+ T VL V + G + +
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251
Query: 264 SYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR----NVVSWNAMISGMAY 319
++ D V + ++D CK G+ ++FNEM M+ N++++N +I G
Sbjct: 252 RKMEERNIKLDAVKY-SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCN 310
Query: 320 NGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLE 378
G + G L DM+ R + PN TF ++ G + EL M + + P
Sbjct: 311 AGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM-IHRGIAPDTI 369
Query: 379 HYGCVVDLLGRCGHVREA---LDLIRSMPMEPTAALWGALLSA-CRTH 422
Y ++D + H+ +A +DL+ S +P + L++ C+ +
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKAN 417
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 174/394 (44%), Gaps = 27/394 (6%)
Query: 62 RVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLL----KA 117
R+ P++I N+++ LS + L M P+ T+ +L K+
Sbjct: 183 RMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY-GCQPNAVTYGPVLNVMCKS 241
Query: 118 ASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRER----D 173
+L + + + L ++ + G+ + + + +A +F+EM + +
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS----LDNAFNLFNEMEMKGITTN 297
Query: 174 VIVWNLMIQGYCKVGELETGLELFRRMGDR----SVVSWNLMISCLAKGKKEEEALVLFR 229
+I +N++I G+C G + G +L R M R +VV+++++I K K EA L +
Sbjct: 298 IITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHK 357
Query: 230 EMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKC 289
EM+ +G PD T +++ + D + KG +I + N L++ YCK
Sbjct: 358 EMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTF-NILINGYCKA 416
Query: 290 GNPQAGLSVFNEMPMRNV----VSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTF 344
GL +F +M +R V V++N +I G G V LF++MV R V PN T+
Sbjct: 417 NRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTY 476
Query: 345 VGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMP 404
+L G ++ E+F+ + K ++ + Y ++ + V +A DL S+P
Sbjct: 477 KILLDGLCDNGESEKALEIFEKIE-KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 535
Query: 405 M---EPTAALWGALLSACRTHGDREIAEIAAKEL 435
+ +P + ++ G AE+ +++
Sbjct: 536 LKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM 569
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 155/358 (43%), Gaps = 16/358 (4%)
Query: 62 RVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNL 121
R+ P +I N+++ L+ L M P+ T+ +LK
Sbjct: 167 RMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVET-GFQPNEVTYGPVLKVMCKS 225
Query: 122 RDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMR----ERDVIVW 177
L L ++ +++ + +A +F+EM + D+I++
Sbjct: 226 GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIY 285
Query: 178 NLMIQGYCKVGELETGLELFRRMGDR----SVVSWNLMISCLAKGKKEEEALVLFREMLE 233
+I+G+C G + G +L R M R VV+++ +I C K K EA L +EM++
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ 345
Query: 234 KGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQ 293
+G PD T +++ + D + KG +I + N L++ YCK
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTF-NILINGYCKANLID 404
Query: 294 AGLSVFNEMPMRNV----VSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVL 348
GL +F +M +R V V++N +I G G EV LF++MV R V P+ ++ +L
Sbjct: 405 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILL 464
Query: 349 ACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPME 406
G ++ E+F+ + K ++ + Y ++ + V +A DL S+P++
Sbjct: 465 DGLCDNGEPEKALEIFEKIE-KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 521
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 150/346 (43%), Gaps = 20/346 (5%)
Query: 94 LFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELY 153
LF M +R P F L + + + L L Q+ G A + ++
Sbjct: 59 LFQEMTRSRP-RPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCC 117
Query: 154 ANCERMGDA----GKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDR----SV 205
C ++ A GK+ E D + ++ +I G C G + LEL RM + ++
Sbjct: 118 CRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTL 177
Query: 206 VSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSY 265
++ N +++ L K +A++L M+E GF+P++ T VL V + G + +
Sbjct: 178 ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRK 237
Query: 266 ANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR----NVVSWNAMISGMAYNG 321
++ D V + ++D CK G+ ++FNEM ++ +++ + +I G Y G
Sbjct: 238 MEERKIKLDAVKY-SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAG 296
Query: 322 MGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHY 380
+ G L DM+ R +TP+ F ++ C G + EL M ++ + P Y
Sbjct: 297 RWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM-IQRGISPDTVTY 355
Query: 381 GCVVDLLGRCGHVREA---LDLIRSMPMEPTAALWGALLSA-CRTH 422
++D + + +A LDL+ S P + L++ C+ +
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKAN 401
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 121/287 (42%), Gaps = 15/287 (5%)
Query: 71 NIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSL 130
+II++ ++I+ + + L M R I+PD F +L+ + + L
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIK-RKITPDVVAFSALIDCFVKEGKLREAEEL 339
Query: 131 HAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRER----DVIVWNLMIQGYCK 186
H ++ G + +++ + ++ A + D M + ++ +N++I GYCK
Sbjct: 340 HKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCK 399
Query: 187 VGELETGLELFRRMGDRSV----VSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDAT 242
++ GLELFR+M R V V++N +I + K E A LF+EM+ + PD +
Sbjct: 400 ANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS 459
Query: 243 LVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEM 302
+L G + I DI + N ++ C +F +
Sbjct: 460 YKILLDGLCDNGEPEKALEIFEKIEKSKMELDI-GIYNIIIHGMCNASKVDDAWDLFCSL 518
Query: 303 PMR----NVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTF 344
P++ +V ++N MI G+ G LF M G +PN T+
Sbjct: 519 PLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTY 565
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 131/293 (44%), Gaps = 17/293 (5%)
Query: 173 DVIVWNLMIQGYCKVGELETGLELFRRMGDR----SVVSWNLMISCLAK-GKKEEEALVL 227
DV + ++ Y + G+ E ++LF RM + ++V++N+++ K G+ + L +
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 228 FREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYC 287
EM KG + D+ T TVL CAR G + + G+ V+ N+L+ +
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTY-NALLQVFG 327
Query: 288 KCGNPQAGLSVFNEMPMR----NVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDS 342
K G LSV EM + V++N +++ G + G+ E M +GV PN
Sbjct: 328 KAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAI 387
Query: 343 TFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLI-- 400
T+ V+ AG D +LF SM + +P Y V+ LLG+ E + ++
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMK-EAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCD 446
Query: 401 -RSMPMEPTAALWGALLSACRTHGDREIAEIAAKELVN--VEPWNSGHHVLLS 450
+S P A W +L+ C G + +E+ + EP + L+S
Sbjct: 447 MKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLIS 499
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/342 (19%), Positives = 139/342 (40%), Gaps = 49/342 (14%)
Query: 62 RVFNHSPNPNIILFNSIIKAC-SLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASN 120
R+ P+P ++ +N I+ + +++ + MR ++ + D FT ++L A +
Sbjct: 235 RMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMR-SKGLKFDEFTCSTVLSACAR 293
Query: 121 LRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRER----DVIV 176
+ + A++ + G+ +++++ +A V EM E D +
Sbjct: 294 EGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVT 353
Query: 177 WNLMIQGYCKVGELETGLELFRRMGDRSV----VSWNLMISCLAKGKKEEEALVLFREML 232
+N ++ Y + G + + M + V +++ +I K KE+EAL LF M
Sbjct: 354 YNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMK 413
Query: 233 EKGFEPDDATLVTVLPVCARLG-----------------AADVGEW--IHSYANDKGF-- 271
E G P+ T VL + + + + W + + +KG
Sbjct: 414 EAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDK 473
Query: 272 -----LRDIVSVG--------NSLVDFYCKCGNPQAGLSVFNEMPMRN----VVSWNAMI 314
R++ S G N+L+ Y +CG+ ++ EM V ++NA++
Sbjct: 474 FVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALL 533
Query: 315 SGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACCAHAG 355
+ +A G G + DM +G P ++++ +L C A G
Sbjct: 534 NALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGG 575
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 154/365 (42%), Gaps = 27/365 (7%)
Query: 12 ILSLLHGAKTRT-QLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPN- 69
+LSLL G K+R+ ++ ++ +G + +++C + + RVF +
Sbjct: 427 VLSLL-GKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSC 485
Query: 70 ---PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQL 126
P+ FN++I A ++ M A + T+ +LL A + D++
Sbjct: 486 GFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRA-GFNACVTTYNALLNALARKGDWRS 544
Query: 127 GQSLHAQVTTLGFARHGPVRVGVVELYAN------CERMGD---AGKVFDE-MRERDVIV 176
G+++ + + + GF +++ YA ER+ + G++F M R +++
Sbjct: 545 GENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLL 604
Query: 177 WNLMIQGYCKVGELETGLELFRRMGDR-SVVSWNLMISCLAKGKKEEEALVLFREMLEKG 235
N + + E LF++ G + +V +N M+S + ++A + + E G
Sbjct: 605 ANFKCRA---LAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDG 661
Query: 236 FEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAG 295
PD T +++ + R G E I D+VS N+++ +C+ G Q
Sbjct: 662 LSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSY-NTVIKGFCRRGLMQEA 720
Query: 296 LSVFNEMPMRN----VVSWNAMISGMAYNGMGEVGVGLFEDMVRG-VTPNDSTFVGVLAC 350
+ + +EM R + ++N +SG GM + E M + PN+ TF V+
Sbjct: 721 VRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDG 780
Query: 351 CAHAG 355
AG
Sbjct: 781 YCRAG 785
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 172/409 (42%), Gaps = 69/409 (16%)
Query: 33 LRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCF 92
L G + + ++ + RV A +F P P I++FN++I
Sbjct: 314 LIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAK 373
Query: 93 HLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVEL 152
+ S M + I PD T+ SL+ G+ + G V
Sbjct: 374 AVLSDMVTSYGIVPDVCTYNSLI---------------------YGYWKEGLV------- 405
Query: 153 YANCERMGDAGKVFDEMRER----DVIVWNLMIQGYCKVGELETGLELFRRMG----DRS 204
G A +V +MR + +V + +++ G+CK+G+++ + M +
Sbjct: 406 -------GLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPN 458
Query: 205 VVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHS 264
V +N +IS K + EA+ +FREM KG +PD T +++ G +V E H+
Sbjct: 459 TVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS-----GLCEVDEIKHA 513
Query: 265 YANDKGFLRDIVSVG--------NSLVDFYCKCGNPQAGLSVFNEMPMR----NVVSWNA 312
LRD++S G N+L++ + + G + + NEM + + +++N+
Sbjct: 514 L----WLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNS 569
Query: 313 MISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKF 371
+I G+ G + LFE M+R G P++ + ++ +G+V+ E M ++
Sbjct: 570 LIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG 629
Query: 372 QLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPME---PTAALWGALLS 417
P + + +++ L R G + + L + R + E P + L+S
Sbjct: 630 S-TPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 163/404 (40%), Gaps = 29/404 (7%)
Query: 18 GAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVF----NHSPNPNII 73
G TR L + + N +L I V + H+V A VF + P +
Sbjct: 163 GQTTRLMLEMRNVYSCEPTFKSYNVVLE--ILVSGNCHKV--AANVFYDMLSRKIPPTLF 218
Query: 74 LFNSIIKA-CSLSPPFQQCFHLFSLMRN--ARAISPDYFTFPSLLKAASNLRDFQLGQSL 130
F ++KA C+++ + SL+R+ P+ + +L+ + S L
Sbjct: 219 TFGVVMKAFCAVN----EIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQL 274
Query: 131 HAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRER----DVIVWNLMIQGYCK 186
++ +G V+ +R+ +A K+ + M R D I + ++ G CK
Sbjct: 275 LEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCK 334
Query: 187 VGELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEK-GFEPDDATLVT 245
+G ++ +LF R+ +V +N +I + ++A + +M+ G PD T +
Sbjct: 335 IGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNS 394
Query: 246 VLPVCARLGAADVG-EWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPM 304
++ + G + E +H N KG ++ S LVD +CK G +V NEM
Sbjct: 395 LIYGYWKEGLVGLALEVLHDMRN-KGCKPNVYSY-TILVDGFCKLGKIDEAYNVLNEMSA 452
Query: 305 R----NVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDR 359
N V +N +IS V +F +M R G P+ TF +++ +
Sbjct: 453 DGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKH 512
Query: 360 GRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSM 403
L M + ++ Y +++ R G ++EA L+ M
Sbjct: 513 ALWLLRDM-ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM 555
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 101/255 (39%), Gaps = 56/255 (21%)
Query: 47 FISVCASLHRVPYATRVFNHSP----NPNIILFNSIIKACSLSPPFQQCFHLFSLM---- 98
IS HR+P A +F P P++ FNS+I + L M
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 99 ---------------------RNARAI--------SP-DYFTFPSLLKAASNLRDFQLGQ 128
+ AR + SP D T+ SL+K + +
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKAR 584
Query: 129 SLHAQVTTLGFARHGPVRVGVVELYANCERMG---DAGKVFDEMRER----DVIVWNLMI 181
SL ++ G H P + L R G +A + EM R D++ +N +I
Sbjct: 585 SLFEKMLRDG---HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI 641
Query: 182 QGYCKVGELETGLELFRRMGDRSV----VSWNLMISCLAKGKKEEEALVLFREMLEKGFE 237
G C+ G +E GL +FR++ + V++N ++S L KG +A +L E +E GF
Sbjct: 642 NGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFV 701
Query: 238 PDDAT----LVTVLP 248
P+ T L +++P
Sbjct: 702 PNHRTWSILLQSIIP 716
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 135/316 (42%), Gaps = 54/316 (17%)
Query: 45 AHFISVCASLHRVPYATRVFN----HSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRN 100
+ IS + R A+R+ + NPN++ FN++I A + L+ M
Sbjct: 299 SSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK 358
Query: 101 ARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMG 160
R+I PD FT+ SL+ GF H +R+
Sbjct: 359 -RSIDPDIFTYSSLIN---------------------GFCMH--------------DRLD 382
Query: 161 DAGKVFDEMRERD----VIVWNLMIQGYCKVGELETGLELFRRMGDR----SVVSWNLMI 212
+A +F+ M +D V+ +N +I G+CK ++ G+ELFR M R + V++ +I
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Query: 213 SCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFL 272
+ + + A ++F++M+ G P+ T T+L + G + + Y + +
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ-RSKM 501
Query: 273 RDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR----NVVSWNAMISGMAYNGMGEVGVG 328
+ N +++ CK G + G +F + ++ +V+ +N MISG G+ E
Sbjct: 502 EPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADA 561
Query: 329 LFEDMVR-GVTPNDST 343
LF M G P+ T
Sbjct: 562 LFRKMREDGPLPDSGT 577
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 175/411 (42%), Gaps = 80/411 (19%)
Query: 94 LFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELY 153
LF M +R + P F F LL A + ++ F L SL ++ LG + + LY
Sbjct: 72 LFGGMVKSRPL-PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHN---------LY 121
Query: 154 ANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRM----GDRSVVSWN 209
+N++I +C+ ++ L L +M + S+V+ +
Sbjct: 122 T----------------------YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLS 159
Query: 210 LMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYAND- 268
+++ GK+ +A+ L +M+E G+ PD T T++ G ++H+ A++
Sbjct: 160 SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH----------GLFLHNKASEA 209
Query: 269 ---------KGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPM----RNVVSWNAMIS 315
+G ++V+ G +V+ CK G+ ++ N+M NVV ++ +I
Sbjct: 210 VALVDRMVQRGCQPNLVTYG-VVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVID 268
Query: 316 GMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLAC-CAHAGLVDRGRELFDSMAVKFQL 373
+ + + LF +M +GV PN T+ +++C C + D R L D + K
Sbjct: 269 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN- 327
Query: 374 LPKLEHYGCVVDLLGRCGHVREALDLIRSM---PMEPTAALWGALLSACRTHGDREIAE- 429
P + + ++D + G + EA L M ++P + +L++ H + A+
Sbjct: 328 -PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 386
Query: 430 -----IAAKELVNVEPWNSGHHVLLSNIYAEEMRWDE-VEKVRVLMREGHI 474
I+ NV +N+ L N + + R DE VE R + + G +
Sbjct: 387 MFELMISKDCFPNVVTYNT-----LINGFCKAKRIDEGVELFREMSQRGLV 432
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 123/289 (42%), Gaps = 50/289 (17%)
Query: 69 NPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQ 128
NPN++ FN++I A F + L+ M R+I PD FT+ SL+
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK-RSIDPDIFTYNSLVN------------ 373
Query: 129 SLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERD----VIVWNLMIQGY 184
GF H +R+ A ++F+ M +D V+ +N +I+G+
Sbjct: 374 ---------GFCMH--------------DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 410
Query: 185 CKVGELETGLELFRRMGDRSV----VSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDD 240
CK +E G ELFR M R + V++ +I L + A +F++M+ G PD
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 470
Query: 241 ATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFN 300
T +L G + + Y DI + ++++ CK G G +F
Sbjct: 471 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY-IYTTMIEGMCKAGKVDDGWDLFC 529
Query: 301 EMPMR----NVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTF 344
+ ++ NVV++N MISG+ + + L + M G PN T+
Sbjct: 530 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTY 578
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 160/387 (41%), Gaps = 26/387 (6%)
Query: 35 HGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHL 94
HGL+ N ++ F + ++ P+I+ +S++ L
Sbjct: 118 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177
Query: 95 FSLMRNARAISPDYFTFPSLL---------KAASNLRDFQLGQSLHAQVTTLGFARHGPV 145
M PD TF +L+ A L D + + + T G +G
Sbjct: 178 VDQMVEM-GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 146 RVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDR-- 203
+ G +L N +A K+ E DV+++N +I CK ++ L LF+ M +
Sbjct: 237 KRGDTDLALNLLNKMEAAKI-----EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 291
Query: 204 --SVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEW 261
+VV+++ +ISCL + +A L +M+EK P+ T ++ + G E
Sbjct: 292 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 351
Query: 262 IHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR----NVVSWNAMISGM 317
++ + DI + NSLV+ +C +F M + +VV++N +I G
Sbjct: 352 LYDDMIKRSIDPDIFTY-NSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 410
Query: 318 AYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPK 376
+ E G LF +M RG+ + T+ ++ H G D +++F M V + P
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM-VSDGVPPD 469
Query: 377 LEHYGCVVDLLGRCGHVREALDLIRSM 403
+ Y ++D L G + +AL++ M
Sbjct: 470 IMTYSILLDGLCNNGKLEKALEVFDYM 496
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 95/193 (49%), Gaps = 9/193 (4%)
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQS 129
P+++ +N++IK S + LF M + R + D T+ +L++ + D Q
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSH-RGLVGDTVTYTTLIQGLFHDGDCDNAQK 456
Query: 130 LHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRER----DVIVWNLMIQGYC 185
+ Q+ + G +++ N ++ A +VFD M++ D+ ++ MI+G C
Sbjct: 457 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 516
Query: 186 KVGELETGLELFRRMGDR----SVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDA 241
K G+++ G +LF + + +VV++N MIS L + +EA L ++M E G P+
Sbjct: 517 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSG 576
Query: 242 TLVTVLPVCARLG 254
T T++ R G
Sbjct: 577 TYNTLIRAHLRDG 589
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 124/269 (46%), Gaps = 34/269 (12%)
Query: 176 VWNLMIQGYCKVGELETGLELFRRM----GDRSVVSWNLMISCLAKGKKEEEALVLFREM 231
+N++I +C+ ++ L L +M + S+V+ + +++ GK+ +A+ L +M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 232 LEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYAND----------KGFLRDIVSVGNS 281
+E G+ PD T T++ G ++H+ A++ +G ++V+ G
Sbjct: 182 VEMGYRPDTITFTTLIH----------GLFLHNKASEAVALVDRMVQRGCQPNLVTYG-V 230
Query: 282 LVDFYCKCGNPQAGLSVFNEMPM----RNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRG 336
+V+ CK G+ L++ N+M +VV +N +I + + + LF++M +G
Sbjct: 231 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 290
Query: 337 VTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREA 396
+ PN T+ +++C G +L M K ++ P L + ++D + G EA
Sbjct: 291 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK-KINPNLVTFNALIDAFVKEGKFVEA 349
Query: 397 LDLIRSM---PMEPTAALWGALLSACRTH 422
L M ++P + +L++ H
Sbjct: 350 EKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 140/333 (42%), Gaps = 53/333 (15%)
Query: 69 NPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQ 128
NPN++ FNS+I A + + LF M R+I P+ T+ SL+
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ-RSIDPNIVTYNSLIN------------ 353
Query: 129 SLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERD----VIVWNLMIQGY 184
GF H +R+ +A ++F M +D V+ +N +I G+
Sbjct: 354 ---------GFCMH--------------DRLDEAQQIFTLMVSKDCLPDVVTYNTLINGF 390
Query: 185 CKVGELETGLELFRRMGDR----SVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDD 240
CK ++ G+ELFR M R + V++ +I + + A ++F++M+ G P+
Sbjct: 391 CKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNI 450
Query: 241 ATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFN 300
T T+L + G + + Y DI + N + + CK G + G +F
Sbjct: 451 MTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTY-NIMSEGMCKAGKVEDGWDLFC 509
Query: 301 EMPMR----NVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAG 355
+ ++ +V+++N MISG G+ E LF M G P+ T+ ++ G
Sbjct: 510 SLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG 569
Query: 356 LVDRGRELFDSM-AVKFQLLPKLEHYGCVVDLL 387
EL M + +F YG V D+L
Sbjct: 570 DKAASAELIKEMRSCRFA--GDASTYGLVTDML 600
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 154/367 (41%), Gaps = 29/367 (7%)
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLL---------KAASN 120
P+I+ NS++ + L M PD TF +L+ A
Sbjct: 133 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEM-GYQPDTVTFTTLVHGLFQHNKASEAVA 191
Query: 121 LRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLM 180
L + + + + T G +G + G +L N + GK+ E DV++++ +
Sbjct: 192 LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKI-----EADVVIYSTV 246
Query: 181 IQGYCKVGELETGLELFRRMGDR----SVVSWNLMISCLAKGKKEEEALVLFREMLEKGF 236
I CK ++ L LF M ++ V +++ +ISCL + +A L +MLE+
Sbjct: 247 IDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKI 306
Query: 237 EPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGL 296
P+ T +++ A+ G E + + +IV+ NSL++ +C
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTY-NSLINGFCMHDRLDEAQ 365
Query: 297 SVFNEMPMR----NVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACC 351
+F M + +VV++N +I+G G+ LF DM RG+ N T+ ++
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425
Query: 352 AHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREAL---DLIRSMPMEPT 408
A D + +F M V + P + Y ++D L + G + +A+ + ++ MEP
Sbjct: 426 FQASDCDNAQMVFKQM-VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPD 484
Query: 409 AALWGAL 415
+ +
Sbjct: 485 IYTYNIM 491
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 85/402 (21%), Positives = 166/402 (41%), Gaps = 50/402 (12%)
Query: 88 FQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRV 147
+ LF M +R P F LL A + ++ F L S ++ LG + +
Sbjct: 46 LDEAVDLFGEMVKSRPF-PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHN----- 99
Query: 148 GVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDR---- 203
LY +N+MI C+ +L L + +M
Sbjct: 100 ----LYT----------------------YNIMINCLCRRSQLSFALAILGKMMKLGYGP 133
Query: 204 SVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIH 263
S+V+ N +++ G + EA+ L +M+E G++PD T T++ + A +
Sbjct: 134 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 193
Query: 264 SYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPM----RNVVSWNAMISGMAY 319
KG D+V+ G ++++ CK G P L++ N+M +VV ++ +I +
Sbjct: 194 ERMVVKGCQPDLVTYG-AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCK 252
Query: 320 NGMGEVGVGLFEDM-VRGVTPNDSTFVGVLAC-CAHAGLVDRGRELFDSMAVKFQLLPKL 377
+ + LF +M +G+ P+ T+ +++C C + D R L D + K P +
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN--PNV 310
Query: 378 EHYGCVVDLLGRCGHVREALDLIRSM---PMEPTAALWGALLSACRTHGDREIAEIAAKE 434
+ ++D + G + EA L M ++P + +L++ H + A+
Sbjct: 311 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 370
Query: 435 LVNVE--PWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHI 474
+V+ + P ++ L++ + D +E R + R G +
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLV 412
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/306 (20%), Positives = 133/306 (43%), Gaps = 41/306 (13%)
Query: 63 VFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLR 122
+ S +PNI+ +NS+I + + +F+LM + + PD T+ +L+
Sbjct: 336 MIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL-PDVVTYNTLIN------ 388
Query: 123 DFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQ 182
GF + V G +EL+ + R G G + + + +I
Sbjct: 389 ---------------GFCKAKKVVDG-MELFRDMSRRGLVG---------NTVTYTTLIH 423
Query: 183 GYCKVGELETGLELFRRMGDR----SVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEP 238
G+ + + + +F++M +++++N ++ L K K E+A+V+F + + EP
Sbjct: 424 GFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP 483
Query: 239 DDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSV 298
D T + + G + G + + KG D+++ N+++ +CK G + ++
Sbjct: 484 DIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAY-NTMISGFCKKGLKEEAYTL 542
Query: 299 FNEM----PMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRGVTPNDSTFVGVLACCAHA 354
F +M P+ + ++N +I +G L ++M D++ G++ H
Sbjct: 543 FIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHD 602
Query: 355 GLVDRG 360
G +D+G
Sbjct: 603 GRLDKG 608
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 143/343 (41%), Gaps = 51/343 (14%)
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQS 129
PN++++ ++IK + F + M+ + I+PD F + SL+ S + +S
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKE-QGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 130 LHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQG----YC 185
++ G + + Y A K EMRE V+ ++ G YC
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 186 KVGELETGLELFRRMGDRSVV----SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDA 241
K G++ +R M D+ ++ ++ ++++ L K K ++A +FREM KG PD
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPD-- 626
Query: 242 TLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNE 301
+ SY L++ + K GN Q S+F+E
Sbjct: 627 --------------------VFSYG--------------VLINGFSKLGNMQKASSIFDE 652
Query: 302 MPMR----NVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGL 356
M NV+ +N ++ G +G E L ++M V+G+ PN T+ ++ +G
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712
Query: 357 VDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDL 399
+ LFD M +K L+P Y +VD R V A+ +
Sbjct: 713 LAEAFRLFDEMKLK-GLVPDSFVYTTLVDGCCRLNDVERAITI 754
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 139/338 (41%), Gaps = 37/338 (10%)
Query: 127 GQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRER----DVIVWNLMIQ 182
G+ + V + G +G ++G M A +FDEM E +VI++N+++
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLG---------NMQKASSIFDEMVEEGLTPNVIIYNMLLG 670
Query: 183 GYCKVGELETGLELFRRMGDR----SVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEP 238
G+C+ GE+E EL M + + V++ +I K EA LF EM KG P
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP 730
Query: 239 DDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSV 298
D T++ C RL DV I + +K + N+L+++ K G + V
Sbjct: 731 DSFVYTTLVDGCCRLN--DVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEV 788
Query: 299 FNEM--------PMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRG-VTPNDSTFVGVLA 349
N + N V++N MI + G E LF M + P T+ +L
Sbjct: 789 LNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848
Query: 350 CCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPMEP-- 407
G +FD A+ + P Y +++ + G +AL L+ M +
Sbjct: 849 GYDKMGRRAEMFPVFDE-AIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAV 907
Query: 408 ------TAALWGALLSACRTHGDREIAEIAAKELVNVE 439
+ + ALLS G+ E+AE + +V ++
Sbjct: 908 DDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQ 945
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 114/293 (38%), Gaps = 44/293 (15%)
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQS 129
PN + + +II S + F LF M+ + + PD F + +L+ L D + +
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMK-LKGLVPDSFVYTTLVDGCCRLNDVERAIT 753
Query: 130 LHAQVTTLGFARHGPV--------RVGVVELYANC-ERMGDAGKVFDEMRERDVIVWNLM 180
+ + P + G EL R+ D FD + + + +N+M
Sbjct: 754 IFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGS--FDRFGKPNDVTYNIM 811
Query: 181 IQGYCKVGELETGLELFRRMGDR----SVVSWNLMISCLAKGKKEEEALVLFREMLEKGF 236
I CK G LE ELF +M + +V+++ +++ K + E +F E + G
Sbjct: 812 IDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGI 871
Query: 237 EPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGL 296
EPD ++ + G + D+ F ++ V G L C+
Sbjct: 872 EPDHIMYSVIINAFLKEGMTTKALVLV----DQMFAKNAVDDGCKLSISTCR-------- 919
Query: 297 SVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVL 348
A++SG A G EV + E+MVR P+ +T + ++
Sbjct: 920 ---------------ALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELI 957
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 110/272 (40%), Gaps = 14/272 (5%)
Query: 176 VWNLMIQGYCKVGELETGLELFRRMGDRSVV----SWNLMISCLAKGKKEEEALVLFREM 231
++++I G CK+ LE L M V +++L+I L KG+ + A L EM
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 232 LEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGN 291
+ G + V ++ G + + + G + + SL++ YC+ N
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYA-SLIEGYCREKN 397
Query: 292 PQAGLSVFNEMPMRNVV----SWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVG 346
+ G + EM RN+V ++ ++ GM +G + + ++M+ G PN +
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTT 457
Query: 347 VLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSM--- 403
++ + M + + P + Y ++ L + + EA + M
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQ-GIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN 516
Query: 404 PMEPTAALWGALLSACRTHGDREIAEIAAKEL 435
++P A +GA +S + A+ KE+
Sbjct: 517 GLKPNAFTYGAFISGYIEASEFASADKYVKEM 548
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 128/270 (47%), Gaps = 16/270 (5%)
Query: 165 VFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDR-----SVVSWNLMISCLAKGK 219
+ D+ DVI + +++ G C++G ++ GL L + M R S++ ++M+S L K
Sbjct: 318 MLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTG 377
Query: 220 KEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVG 279
+ +EAL LF +M G PD V+ +LG D+ W++ DK L + + G
Sbjct: 378 RIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHG 437
Query: 280 NSLVDFYCKCGNPQAGLSVFNEM----PMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR 335
L+ C+ G S+ + + ++V +N +I G A +G E + LF+ ++
Sbjct: 438 ALLLGL-CQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIE 496
Query: 336 -GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVR 394
G+TP+ +TF ++ + R++ D + + + L P + Y ++D CG+ +
Sbjct: 497 TGITPSVATFNSLIYGYCKTQNIAEARKILDVIKL-YGLAPSVVSYTTLMDAYANCGNTK 555
Query: 395 EALDLIRSMPME---PTAALWGALLSA-CR 420
+L R M E PT + + CR
Sbjct: 556 SIDELRREMKAEGIPPTNVTYSVIFKGLCR 585
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 146/320 (45%), Gaps = 19/320 (5%)
Query: 178 NLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKG----KKEEEALVLFREMLE 233
N++I G C VG + LEL M V ++ + LAKG A + R+ML+
Sbjct: 261 NILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLD 320
Query: 234 KGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQ 293
KG PD T +L +LG D+G + +GF + + + ++ CK G
Sbjct: 321 KGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRID 380
Query: 294 AGLSVFNEMPMR----NVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVL 348
LS+FN+M ++V+++ +I G+ G ++ + L+++M + + PN T +L
Sbjct: 381 EALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALL 440
Query: 349 ACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIR---SMPM 405
G++ R L DS+ + L + Y V+D + G + EAL+L + +
Sbjct: 441 LGLCQKGMLLEARSLLDSLISSGETLD-IVLYNIVIDGYAKSGCIEEALELFKVVIETGI 499
Query: 406 EPTAALWGALLSA-CRTHGDREIAEIA-AKELVNVEPWNSGHHVLLSNIYAEEMRWDEVE 463
P+ A + +L+ C+T E +I +L + P + L+ + YA ++
Sbjct: 500 TPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM-DAYANCGNTKSID 558
Query: 464 KVRVLMREGHIKKVPGQSAT 483
++R RE + +P + T
Sbjct: 559 ELR---REMKAEGIPPTNVT 575
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 94/465 (20%), Positives = 180/465 (38%), Gaps = 88/465 (18%)
Query: 39 HSNQILAHFISVCASL-HRVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSL 97
+S+ IL + + + S+ + A+ + H P+ + +N + K FHL +
Sbjct: 258 YSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKG----------FHLLGM 307
Query: 98 MRNA---------RAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVG 148
+ A + +SPD T+ LL L + +G L + + GF + +
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 367
Query: 149 VVELYANCE--RMGDAGKVFDEMRER----DVIVWNLMIQGYCKVGELETGLELFRRMGD 202
V+ L C+ R+ +A +F++M+ D++ ++++I G CK+G+ + L L+ M D
Sbjct: 368 VM-LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 203 R---------------------------------------SVVSWNLMISCLAKGKKEEE 223
+ +V +N++I AK EE
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 224 ALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLV 283
AL LF+ ++E G P AT +++ + I G +VS +L+
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSY-TTLM 545
Query: 284 DFYCKCGNPQAGLSVFNEMPMRNV----VSWNAMISGMAYNGMGE-------------VG 326
D Y CGN ++ + EM + V+++ + G+ E
Sbjct: 546 DAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCK 605
Query: 327 VGLFEDMVRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDL 386
GL + G+ P+ T+ ++ + G +F + L Y ++D
Sbjct: 606 QGLRDMESEGIPPDQITYNTIIQYLCRVKHLS-GAFVFLEIMKSRNLDASSATYNILIDS 664
Query: 387 LGRCGHVREALDLIRSMPMEPTAALWGALLSACRTH---GDREIA 428
L G++R+A I S+ + + A + + H GD E+A
Sbjct: 665 LCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMA 709
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 128/293 (43%), Gaps = 19/293 (6%)
Query: 126 LGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYC 185
L Q L + T + G V ++ L + + D+ + +M+++++ N+ Q Y
Sbjct: 107 LEQLLQEEGTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNL---NVSTQSYN 163
Query: 186 KV----GELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDA 241
V E + ++++ + D++ +++ ++ L + +K E+A++ R K P
Sbjct: 164 SVLYHFRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVV 223
Query: 242 TLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNE 301
+ +++ +LG D+ + G + + S N L++ C G+ L + ++
Sbjct: 224 SFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYS-HNILINGLCLVGSIAEALELASD 282
Query: 302 MPMRNV----VSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGL 356
M V V++N + G GM + DM+ +G++P+ T+ +L G
Sbjct: 283 MNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGN 342
Query: 357 VDRGRELFDSMAVK-FQLLPKLEHYGCVVDLLGRC--GHVREALDLIRSMPME 406
+D G L M + F+L + C V L G C G + EAL L M +
Sbjct: 343 IDMGLVLLKDMLSRGFELNSIIP---CSVMLSGLCKTGRIDEALSLFNQMKAD 392
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 128/270 (47%), Gaps = 16/270 (5%)
Query: 165 VFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDR-----SVVSWNLMISCLAKGK 219
+ D+ DVI + +++ G C++G ++ GL L + M R S++ ++M+S L K
Sbjct: 318 MLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTG 377
Query: 220 KEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVG 279
+ +EAL LF +M G PD V+ +LG D+ W++ DK L + + G
Sbjct: 378 RIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHG 437
Query: 280 NSLVDFYCKCGNPQAGLSVFNEM----PMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR 335
L+ C+ G S+ + + ++V +N +I G A +G E + LF+ ++
Sbjct: 438 ALLLGL-CQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIE 496
Query: 336 -GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVR 394
G+TP+ +TF ++ + R++ D + + + L P + Y ++D CG+ +
Sbjct: 497 TGITPSVATFNSLIYGYCKTQNIAEARKILDVIKL-YGLAPSVVSYTTLMDAYANCGNTK 555
Query: 395 EALDLIRSMPME---PTAALWGALLSA-CR 420
+L R M E PT + + CR
Sbjct: 556 SIDELRREMKAEGIPPTNVTYSVIFKGLCR 585
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 146/320 (45%), Gaps = 19/320 (5%)
Query: 178 NLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISCLAKG----KKEEEALVLFREMLE 233
N++I G C VG + LEL M V ++ + LAKG A + R+ML+
Sbjct: 261 NILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLD 320
Query: 234 KGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQ 293
KG PD T +L +LG D+G + +GF + + + ++ CK G
Sbjct: 321 KGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRID 380
Query: 294 AGLSVFNEMPMR----NVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVL 348
LS+FN+M ++V+++ +I G+ G ++ + L+++M + + PN T +L
Sbjct: 381 EALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALL 440
Query: 349 ACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIR---SMPM 405
G++ R L DS+ + L + Y V+D + G + EAL+L + +
Sbjct: 441 LGLCQKGMLLEARSLLDSLISSGETLD-IVLYNIVIDGYAKSGCIEEALELFKVVIETGI 499
Query: 406 EPTAALWGALLSA-CRTHGDREIAEIA-AKELVNVEPWNSGHHVLLSNIYAEEMRWDEVE 463
P+ A + +L+ C+T E +I +L + P + L+ + YA ++
Sbjct: 500 TPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM-DAYANCGNTKSID 558
Query: 464 KVRVLMREGHIKKVPGQSAT 483
++R RE + +P + T
Sbjct: 559 ELR---REMKAEGIPPTNVT 575
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 94/465 (20%), Positives = 180/465 (38%), Gaps = 88/465 (18%)
Query: 39 HSNQILAHFISVCASL-HRVPYATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSL 97
+S+ IL + + + S+ + A+ + H P+ + +N + K FHL +
Sbjct: 258 YSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKG----------FHLLGM 307
Query: 98 MRNA---------RAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVG 148
+ A + +SPD T+ LL L + +G L + + GF + +
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 367
Query: 149 VVELYANCE--RMGDAGKVFDEMRER----DVIVWNLMIQGYCKVGELETGLELFRRMGD 202
V+ L C+ R+ +A +F++M+ D++ ++++I G CK+G+ + L L+ M D
Sbjct: 368 VM-LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 203 R---------------------------------------SVVSWNLMISCLAKGKKEEE 223
+ +V +N++I AK EE
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 224 ALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLV 283
AL LF+ ++E G P AT +++ + I G +VS +L+
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSY-TTLM 545
Query: 284 DFYCKCGNPQAGLSVFNEMPMRNV----VSWNAMISGMAYNGMGE-------------VG 326
D Y CGN ++ + EM + V+++ + G+ E
Sbjct: 546 DAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCK 605
Query: 327 VGLFEDMVRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDL 386
GL + G+ P+ T+ ++ + G +F + L Y ++D
Sbjct: 606 QGLRDMESEGIPPDQITYNTIIQYLCRVKHLS-GAFVFLEIMKSRNLDASSATYNILIDS 664
Query: 387 LGRCGHVREALDLIRSMPMEPTAALWGALLSACRTH---GDREIA 428
L G++R+A I S+ + + A + + H GD E+A
Sbjct: 665 LCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMA 709
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 128/293 (43%), Gaps = 19/293 (6%)
Query: 126 LGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYC 185
L Q L + T + G V ++ L + + D+ + +M+++++ N+ Q Y
Sbjct: 107 LEQLLQEEGTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNL---NVSTQSYN 163
Query: 186 KV----GELETGLELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDA 241
V E + ++++ + D++ +++ ++ L + +K E+A++ R K P
Sbjct: 164 SVLYHFRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVV 223
Query: 242 TLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNE 301
+ +++ +LG D+ + G + + S N L++ C G+ L + ++
Sbjct: 224 SFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYS-HNILINGLCLVGSIAEALELASD 282
Query: 302 MPMRNV----VSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGL 356
M V V++N + G GM + DM+ +G++P+ T+ +L G
Sbjct: 283 MNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGN 342
Query: 357 VDRGRELFDSMAVK-FQLLPKLEHYGCVVDLLGRC--GHVREALDLIRSMPME 406
+D G L M + F+L + C V L G C G + EAL L M +
Sbjct: 343 IDMGLVLLKDMLSRGFELNSIIP---CSVMLSGLCKTGRIDEALSLFNQMKAD 392
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 169/410 (41%), Gaps = 56/410 (13%)
Query: 62 RVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNL 121
++ P P+I+ F+ ++ + S + LF M I D +++ ++
Sbjct: 59 KMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVC-GIGHDLYSYNIVINCLCRC 117
Query: 122 RDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRER----DVIVW 177
F + S+ ++ G+ ++ + R+ DA + +M E DV+++
Sbjct: 118 SRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIY 177
Query: 178 NLMIQGYCKVGELETGLELFRRM---GDRS------------------------------ 204
N +I G CK+G + +ELF RM G R+
Sbjct: 178 NTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVM 237
Query: 205 ------VVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADV 258
V+++ +I K K EA+ L+ EM + +PD T +++ G D
Sbjct: 238 RDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDE 297
Query: 259 GEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR----NVVSWNAMI 314
+ + KG L D+V+ N+L++ +CK G +F EM R + +++N +I
Sbjct: 298 AKQMLDLMVTKGCLPDVVTY-NTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTII 356
Query: 315 SGMAYNGMGEVGVGLFEDMVRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLL 374
G G + +F M PN T+ +L V++ LF++M K ++
Sbjct: 357 QGYFQAGRPDAAQEIFSRM--DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQ-KSEIE 413
Query: 375 PKLEHYGCVVDLLGRCGHVREALDLIRSMP---MEPTAALWGALLSA-CR 420
+ Y V+ + + G+V +A DL RS+ ++P + ++S CR
Sbjct: 414 LDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCR 463
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 95/252 (37%), Gaps = 59/252 (23%)
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKA---------ASN 120
PN+I F ++I F + L+ M R + PD FT+ SL+ A
Sbjct: 242 PNVITFTAVIDVFVKEGKFSEAMKLYEEM-TRRCVDPDVFTYNSLINGLCMHGRVDEAKQ 300
Query: 121 LRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRER----DVIV 176
+ D + + V T +G + +R+ + K+F EM +R D I
Sbjct: 301 MLDLMVTKGCLPDVVTYNTLING---------FCKSKRVDEGTKLFREMAQRGLVGDTIT 351
Query: 177 WNLMIQGYCKVGELETGLELFRRMGDR--------------------------------- 203
+N +IQGY + G + E+F RM R
Sbjct: 352 YNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSE 411
Query: 204 ---SVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGE 260
+ ++N++I + K E+A LFR + KG +PD + T++ R D +
Sbjct: 412 IELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSD 471
Query: 261 WIHSYANDKGFL 272
++ + G L
Sbjct: 472 LLYRKMQEDGLL 483
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 86/179 (48%), Gaps = 16/179 (8%)
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQS 129
P+++ +N++I S + LF M R + D T+ ++++ FQ G+
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQ-RGLVGDTITYNTIIQGY-----FQAGRP 365
Query: 130 LHAQVTTLGFARHGPVRVGVVELYANCE--RMGDAGKVFDEMR----ERDVIVWNLMIQG 183
AQ +R + LY C R+ A +F+ M+ E D+ +N++I G
Sbjct: 366 DAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHG 425
Query: 184 YCKVGELETGLELFRRMGDR----SVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEP 238
CK+G +E +LFR + + VVS+ MIS + ++ +++ +L+R+M E G P
Sbjct: 426 MCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 157/355 (44%), Gaps = 35/355 (9%)
Query: 70 PNIILFNSIIKAC-SLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQ 128
PN++ NS++K + P Q FH L + R D +F + A+ L
Sbjct: 56 PNLV--NSVLKRLWNHGPKALQFFHF--LDNHHREYVHDASSFDLAIDIAARLH------ 105
Query: 129 SLHAQVTTLGFARHGPVRVG--------VVELYANCERMGDAGKVFDEMRE----RDVIV 176
LH V +L R +R+G V E YA+ + A K+F M E +D+
Sbjct: 106 -LHPTVWSL-IHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLAS 163
Query: 177 WNLMIQGYCKVGELETGLELFRRMGDR---SVVSWNLMISCLAKGKKEEEALVLFREMLE 233
+N ++ CK +E ELFR + R V++N++++ K+ +AL + +EM+E
Sbjct: 164 FNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVE 223
Query: 234 KGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQ 293
+G P+ T T+L R G + D+V+ ++V + G +
Sbjct: 224 RGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTY-TTVVHGFGVAGEIK 282
Query: 294 AGLSVFNEM----PMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVL 348
+VF+EM + +V ++NAMI + E V +FE+MVR G PN +T+ ++
Sbjct: 283 RARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLI 342
Query: 349 ACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSM 403
HAG RG EL M + P + Y ++ C V +AL L M
Sbjct: 343 RGLFHAGEFSRGEELMQRMENE-GCEPNFQTYNMMIRYYSECSEVEKALGLFEKM 396
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 118/265 (44%), Gaps = 35/265 (13%)
Query: 75 FNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLL----------KAASNLRDF 124
FN+I+ S ++ + LF +R S D T+ +L KA L++
Sbjct: 164 FNTILDVLCKSKRVEKAYELFRALRGR--FSVDTVTYNVILNGWCLIKRTPKALEVLKEM 221
Query: 125 QLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERD----VIVWNLM 180
+ + ++ +TT G R G + A + F EM++RD V+ + +
Sbjct: 222 -VERGINPNLTTYNTMLKGFFRAGQIR---------HAWEFFLEMKKRDCEIDVVTYTTV 271
Query: 181 IQGYCKVGELETGLELFRRMGDR----SVVSWNLMISCLAKGKKEEEALVLFREMLEKGF 236
+ G+ GE++ +F M SV ++N MI L K E A+V+F EM+ +G+
Sbjct: 272 VHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGY 331
Query: 237 EPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGL 296
EP+ T ++ G GE + ++G + + N ++ +Y +C + L
Sbjct: 332 EPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTY-NMMIRYYSECSEVEKAL 390
Query: 297 SVFNEMP----MRNVVSWNAMISGM 317
+F +M + N+ ++N +ISGM
Sbjct: 391 GLFEKMGSGDCLPNLDTYNILISGM 415
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 140/291 (48%), Gaps = 20/291 (6%)
Query: 171 ERDVIVWNLMIQGYCKVGELETGLELFRRMGDR----SVVSWNLMISCLAKGKKEEEALV 226
E D I ++ ++ G+C G + + L RM + +V+ + +I+ L + EALV
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 196
Query: 227 LFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFY 286
L M+E GF+PD+ T VL + G + + + ++ +V + ++D
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQY-SIVIDSL 255
Query: 287 CKCGNPQAGLSVFNEMPMR----NVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPND 341
CK G+ LS+FNEM M+ +VV+++++I G+ +G + G + +M+ R + P+
Sbjct: 256 CKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDV 315
Query: 342 STFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGR--CGH-VREALD 398
TF ++ G + +EL++ M + + P Y ++D + C H + D
Sbjct: 316 VTFSALIDVFVKEGKLLEAKELYNEMITR-GIAPDTITYNSLIDGFCKENCLHEANQMFD 374
Query: 399 LIRSMPMEPTAALWGALL-SACRTH----GDREIAEIAAKELV-NVEPWNS 443
L+ S EP + L+ S C+ G R EI++K L+ N +N+
Sbjct: 375 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 425
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 132/285 (46%), Gaps = 22/285 (7%)
Query: 158 RMGDAGKVFDEMRER----DVIVWNLMIQGYCKVGELETGLELFRRMGDR----SVVSWN 209
R+ +A + D M E D + + ++ CK G L+LFR+M +R SVV ++
Sbjct: 190 RVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYS 249
Query: 210 LMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDK 269
++I L K ++AL LF EM KG + D T +++ G D G + +
Sbjct: 250 IVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR 309
Query: 270 GFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNV----VSWNAMISGMAYNGMGEV 325
+ D+V+ ++L+D + K G ++NEM R + +++N++I G
Sbjct: 310 NIIPDVVTF-SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 368
Query: 326 GVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVV 384
+F+ MV +G P+ T+ ++ A VD G LF ++ K L+P Y +V
Sbjct: 369 ANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK-GLIPNTITYNTLV 427
Query: 385 DLLGRC--GHVREALDLIRSM---PMEPTAALWGALLSACRTHGD 424
LG C G + A +L + M + P+ +G LL +G+
Sbjct: 428 --LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 470
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 125/287 (43%), Gaps = 24/287 (8%)
Query: 101 ARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMG 160
R I PD TF +L+ + L+ ++ T G A +++ + +
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 161 DAGKVFDEMR----ERDVIVWNLMIQGYCKVGELETGLELFRRMGDR----SVVSWNLMI 212
+A ++FD M E D++ ++++I YCK ++ G+ LFR + + + +++N ++
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 213 SCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFL 272
+ K A LF+EM+ +G P T +L G D GE + +
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLD-----GLCDNGELNKALEIFEKMQ 482
Query: 273 RDIVSVG----NSLVDFYCKCGNPQAGLSVFNEMPMR----NVVSWNAMISGMAYNGMGE 324
+ +++G N ++ C S+F + + +VV++N MI G+ G
Sbjct: 483 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLS 542
Query: 325 VGVGLFEDMVR-GVTPNDSTF-VGVLACCAHAGLVDRGRELFDSMAV 369
LF M G TP+D T+ + + A +GL+ EL + M V
Sbjct: 543 EADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLI-SSVELIEEMKV 588
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 127/276 (46%), Gaps = 14/276 (5%)
Query: 165 VFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDR----SVVSWNLMISCLAKGKK 220
+ E + DV +N +I G CK+GE++ +E+ +M R + V++N +IS L K +
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 221 EEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGN 280
EEA L R + KG PD T +++ V + KG D + N
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTY-N 439
Query: 281 SLVDFYCKCGNPQAGLSVFNEMPM----RNVVSWNAMISGMAYNGMGEVGVGLFEDM-VR 335
L+D C G L++ +M + R+V+++N +I G +F++M V
Sbjct: 440 MLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVH 499
Query: 336 GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVRE 395
GV+ N T+ ++ + V+ +L D M ++ Q P Y ++ R G +++
Sbjct: 500 GVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ-KPDKYTYNSLLTHFCRGGDIKK 558
Query: 396 ALDLIRSMPM---EPTAALWGALLSACRTHGDREIA 428
A D++++M EP +G L+S G E+A
Sbjct: 559 AADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 123/278 (44%), Gaps = 14/278 (5%)
Query: 69 NPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQ 128
+PN + +N++I ++ L ++ ++ I PD TF SL++ R+ ++
Sbjct: 362 SPNTVTYNTLISTLCKENQVEEATELARVL-TSKGILPDVCTFNSLIQGLCLTRNHRVAM 420
Query: 129 SLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMR----ERDVIVWNLMIQGY 184
L ++ + G +++ + ++ +A + +M R VI +N +I G+
Sbjct: 421 ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480
Query: 185 CKVGELETGLELFRRMG----DRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDD 240
CK + E+F M R+ V++N +I L K ++ E+A L +M+ +G +PD
Sbjct: 481 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK 540
Query: 241 ATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFN 300
T ++L R G I G DIV+ G +L+ CK G + +
Sbjct: 541 YTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYG-TLISGLCKAGRVEVASKLLR 599
Query: 301 EMPMRNVV----SWNAMISGMAYNGMGEVGVGLFEDMV 334
+ M+ + ++N +I G+ + LF +M+
Sbjct: 600 SIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREML 637
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 101/236 (42%), Gaps = 12/236 (5%)
Query: 205 VVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHS 264
V ++N++I L + + A+++ +M G PD+ T TV+ G D I
Sbjct: 189 VSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIRE 248
Query: 265 YANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR-----NVVSWNAMISGMAY 319
+ G VSV N +V +CK G + L+ EM + + ++N +++G+
Sbjct: 249 QMVEFGCSWSNVSV-NVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307
Query: 320 NGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLE 378
G + + + + M++ G P+ T+ V++ G V E+ D M + P
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITR-DCSPNTV 366
Query: 379 HYGCVVDLLGRCGHVREALDLIRSMPME---PTAALWGALLSA-CRTHGDREIAEI 430
Y ++ L + V EA +L R + + P + +L+ C T R E+
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 132/307 (42%), Gaps = 54/307 (17%)
Query: 69 NPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQ 128
NPN++ F+++I A + L+ M R+I PD FT+ SL+
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK-RSIDPDIFTYSSLIN------------ 371
Query: 129 SLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERD----VIVWNLMIQGY 184
GF H +R+ +A +F+ M +D V+ ++ +I+G+
Sbjct: 372 ---------GFCMH--------------DRLDEAKHMFELMISKDCFPNVVTYSTLIKGF 408
Query: 185 CKVGELETGLELFRRMGDR----SVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDD 240
CK +E G+ELFR M R + V++ +I + + + A ++F++M+ G P+
Sbjct: 409 CKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI 468
Query: 241 ATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFN 300
T +L + G + Y DI + N +++ CK G + G +F
Sbjct: 469 LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY-NIMIEGMCKAGKVEDGWELFC 527
Query: 301 EMPMR----NVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAG 355
+ ++ NV+++N MISG G E L + M G PN T+ ++ A
Sbjct: 528 NLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI----RAR 583
Query: 356 LVDRGRE 362
L D RE
Sbjct: 584 LRDGDRE 590
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 139/314 (44%), Gaps = 18/314 (5%)
Query: 94 LFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELY 153
LF M +R P F LL A + + F+L SL Q+ TLG + + +
Sbjct: 70 LFGDMVKSRPF-PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCF 128
Query: 154 ANCERMGDAGKVFDEM----RERDVIVWNLMIQGYCKVGELETGLELFRRMGDR----SV 205
++ A V +M E D++ + ++ GYC + + L +M +
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188
Query: 206 VSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSY 265
++ +I L K EA+ L +M+++G +PD T TV+ + G D+ +
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKK 248
Query: 266 ANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR----NVVSWNAMISGMAYNG 321
+KG + V + N+++D CK + L++F EM + +V +++++IS + G
Sbjct: 249 M-EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 307
Query: 322 MGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHY 380
L DM+ R + PN TF ++ G + +L+D M +K + P + Y
Sbjct: 308 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM-IKRSIDPDIFTY 366
Query: 381 GCVVDLLGRCGHVR 394
+++ G C H R
Sbjct: 367 SSLIN--GFCMHDR 378
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 146/349 (41%), Gaps = 50/349 (14%)
Query: 68 PNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLG 127
P P+I+ FN ++ A + F+ L M+ IS D +T+ + L
Sbjct: 79 PFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL-GISHDLYTYSIFINCFCRRSQLSLA 137
Query: 128 QSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRER--------------- 172
++ A++ LG+ ++ Y + +R+ DA + D+M E
Sbjct: 138 LAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG 197
Query: 173 ------------------------DVIVWNLMIQGYCKVGELETGLELFRRMG----DRS 204
D++ + ++ G CK G+++ L L ++M +
Sbjct: 198 LFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEAD 257
Query: 205 VVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHS 264
VV +N +I L K K ++AL LF EM KG PD T +++ G + S
Sbjct: 258 VVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 317
Query: 265 YANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR----NVVSWNAMISGMAYN 320
++ ++V+ ++L+D + K G +++EM R ++ +++++I+G +
Sbjct: 318 DMIERKINPNVVTF-SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 321 GMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMA 368
+ +FE M+ + PN T+ ++ A V+ G ELF M+
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMS 425
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 106/220 (48%), Gaps = 13/220 (5%)
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQS 129
PN++ ++++IK + ++ LF M + R + + T+ +L+ RD Q
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREM-SQRGLVGNTVTYTTLIHGFFQARDCDNAQM 454
Query: 130 LHAQVTTLGFARHGPVRVGVVELYANCE--RMGDAGKVFDEMR----ERDVIVWNLMIQG 183
+ Q+ ++G H + + L C+ ++ A VF+ ++ E D+ +N+MI+G
Sbjct: 455 VFKQMVSVGV--HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEG 512
Query: 184 YCKVGELETGLELFRRMGDR----SVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPD 239
CK G++E G ELF + + +V+++N MIS + +EEA L ++M E G P+
Sbjct: 513 MCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPN 572
Query: 240 DATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVG 279
T T++ R G + + GF D ++G
Sbjct: 573 SGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG 612
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/309 (18%), Positives = 126/309 (40%), Gaps = 49/309 (15%)
Query: 63 VFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLR 122
+ S +P+I ++S+I + + H+F LM ++ P+ T+ +L+K +
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI-SKDCFPNVVTYSTLIKGFCKAK 412
Query: 123 DFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRE----RDVIVWN 178
+ G L +++ G + ++ + +A VF +M +++ +N
Sbjct: 413 RVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN 472
Query: 179 LMIQGYCKVGELETGLELF----RRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEK 234
+++ G CK G+L + +F R + + ++N+MI + K K E+ LF + K
Sbjct: 473 ILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK 532
Query: 235 GFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQA 294
G P+ V N+++ +C+ G+ +
Sbjct: 533 GVSPN------------------------------------VIAYNTMISGFCRKGSKEE 556
Query: 295 GLSVFNEM----PMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVRGVTPNDSTFVGVLAC 350
S+ +M P+ N ++N +I +G E L ++M D++ +G++
Sbjct: 557 ADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 616
Query: 351 CAHAGLVDR 359
H G +D+
Sbjct: 617 MLHDGRLDK 625
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 137/317 (43%), Gaps = 55/317 (17%)
Query: 158 RMGDAGKVFDEMRER----DVIVWNLMIQGYCKVGELETGLELFRRMG----DRSVVSWN 209
++ DA +F +M + ++ +N ++ K+ + E + L +M + +++
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 210 LMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLP-VCARLGAADV---------- 258
+ I+C + + AL + +M++ G+EPD TL ++L C +D
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 259 --------------GEWIHSYAND----------KGFLRDIVSVGNSLVDFYCKCGNPQA 294
G ++H+ A++ +G D+V+ G ++V+ CK G+
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYG-TVVNGLCKRGDIDL 241
Query: 295 GLSVFNEMPM----RNVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLA 349
LS+ +M +VV +N +I G+ + + LF +M +G+ P+ T+ +++
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 350 C-CAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSM---PM 405
C C + D R L D + K P + + ++D + G + EA L M +
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKIN--PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Query: 406 EPTAALWGALLSACRTH 422
+P + +L++ H
Sbjct: 360 DPDIFTYSSLINGFCMH 376
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 119/242 (49%), Gaps = 15/242 (6%)
Query: 173 DVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV----SWNLMISCLAKGKKEEEALVLF 228
D N ++ G C+ G+L+ + + + R V S+N +IS KK +EA +
Sbjct: 504 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 563
Query: 229 REMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDK--GFLRDIVSVGNSLVDFY 286
EM+++G +PD+ T + +C V E I + + K G L D+ + + ++D
Sbjct: 564 DEMVKRGLKPDNYTYSIL--ICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY-SVMIDGC 620
Query: 287 CKCGNPQAGLSVFNEMPMRNV----VSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPND 341
CK + G F+EM +NV V +N +I +G + + L EDM +G++PN
Sbjct: 621 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNS 680
Query: 342 STFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIR 401
+T+ ++ + V+ + LF+ M ++ L P + HY ++D G+ G + + L+R
Sbjct: 681 ATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQMVKVECLLR 739
Query: 402 SM 403
M
Sbjct: 740 EM 741
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 105/479 (21%), Positives = 190/479 (39%), Gaps = 64/479 (13%)
Query: 56 RVPYATRVFNHSPN----PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTF 111
+V A ++F+ PN++ FN++I + + + F +F R + P T+
Sbjct: 275 KVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF-MFKEKMVERGMEPTLITY 333
Query: 112 PSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRE 171
L+K + + + ++T GF + V +++ + + A ++ D M
Sbjct: 334 SILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVS 393
Query: 172 RDVIV----WNLMIQGYCKVGELETGLELFRRM----------GDRSVVS---------- 207
+ + + +N +I+GYCK G+ + L + M SV+
Sbjct: 394 KGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDS 453
Query: 208 -------------------WNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLP 248
+IS L K K +AL L+ + L KGF D T +L
Sbjct: 454 ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLH 513
Query: 249 VCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNV- 307
G D I +G + D VS N+L+ C +EM R +
Sbjct: 514 GLCEAGKLDEAFRIQKEILGRGCVMDRVSY-NTLISGCCGKKKLDEAFMFLDEMVKRGLK 572
Query: 308 ---VSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGREL 363
+++ +I G+ E + ++D R G+ P+ T+ ++ C A + G+E
Sbjct: 573 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 632
Query: 364 FDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMP---MEPTAALWGALLSACR 420
FD M K + P Y ++ R G + AL+L M + P +A + +L+
Sbjct: 633 FDEMMSK-NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 421 THGDREIAEIAAKE--LVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKV 477
E A++ +E + +EP N H+ L + Y + ++ KV L+RE H K V
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEP-NVFHYTALIDGYG---KLGQMVKVECLLREMHSKNV 746
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 120/247 (48%), Gaps = 33/247 (13%)
Query: 173 DVIVWNLMIQGYCKVGELETGLELFRRMGDR----SVVSWNLMISCLAKGKKEEEALVLF 228
DV ++ I +CK G++E ++LF +M + +VV++N +I L + +EA +
Sbjct: 259 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 318
Query: 229 REMLEKGFEPDDAT---LVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDF 285
+M+E+G EP T LV L R+G A ++ KGF +++ V N+L+D
Sbjct: 319 EKMVERGMEPTLITYSILVKGLTRAKRIGDA---YFVLKEMTKKGFPPNVI-VYNNLIDS 374
Query: 286 YCKCGNPQAGLSVFNEMPMRNV----VSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPN 340
+ + G+ + + + M + + ++N +I G NG + L ++M+ G N
Sbjct: 375 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 434
Query: 341 DSTFVGVLA-CCAHAGLVDRGRELFDSMAVKF---QLLPKLEHYGCVVDLL--GRCGHVR 394
+F V+ C+H +FDS A++F LL + G ++ L G C H +
Sbjct: 435 QGSFTSVICLLCSHL--------MFDS-ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGK 485
Query: 395 --EALDL 399
+AL+L
Sbjct: 486 HSKALEL 492
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 104/261 (39%), Gaps = 10/261 (3%)
Query: 75 FNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQV 134
+N++I C + F M R + PD +T+ L+ N+ +
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVK-RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 601
Query: 135 TTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDV----IVWNLMIQGYCKVGEL 190
G +++ ER + + FDEM ++V +V+N +I+ YC+ G L
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRL 661
Query: 191 ETGLELFRRMGDRSVVSWNLMISCLAKG----KKEEEALVLFREMLEKGFEPDDATLVTV 246
LEL M + + + + L KG + EEA +LF EM +G EP+ +
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 721
Query: 247 LPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRN 306
+ +LG E + + K + ++ ++ Y + GN + NEM +
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSKNVHPNKITY-TVMIGGYARDGNVTEASRLLNEMREKG 780
Query: 307 VVSWNAMISGMAYNGMGEVGV 327
+V + Y + + GV
Sbjct: 781 IVPDSITYKEFIYGYLKQGGV 801
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 119/242 (49%), Gaps = 15/242 (6%)
Query: 173 DVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV----SWNLMISCLAKGKKEEEALVLF 228
D N ++ G C+ G+L+ + + + R V S+N +IS KK +EA +
Sbjct: 504 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 563
Query: 229 REMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDK--GFLRDIVSVGNSLVDFY 286
EM+++G +PD+ T + +C V E I + + K G L D+ + + ++D
Sbjct: 564 DEMVKRGLKPDNYTYSIL--ICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY-SVMIDGC 620
Query: 287 CKCGNPQAGLSVFNEMPMRNV----VSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPND 341
CK + G F+EM +NV V +N +I +G + + L EDM +G++PN
Sbjct: 621 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNS 680
Query: 342 STFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIR 401
+T+ ++ + V+ + LF+ M ++ L P + HY ++D G+ G + + L+R
Sbjct: 681 ATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQMVKVECLLR 739
Query: 402 SM 403
M
Sbjct: 740 EM 741
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 105/479 (21%), Positives = 190/479 (39%), Gaps = 64/479 (13%)
Query: 56 RVPYATRVFNHSPN----PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTF 111
+V A ++F+ PN++ FN++I + + + F +F R + P T+
Sbjct: 275 KVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF-MFKEKMVERGMEPTLITY 333
Query: 112 PSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRE 171
L+K + + + ++T GF + V +++ + + A ++ D M
Sbjct: 334 SILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVS 393
Query: 172 RDVIV----WNLMIQGYCKVGELETGLELFRRM----------GDRSVVS---------- 207
+ + + +N +I+GYCK G+ + L + M SV+
Sbjct: 394 KGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDS 453
Query: 208 -------------------WNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLP 248
+IS L K K +AL L+ + L KGF D T +L
Sbjct: 454 ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLH 513
Query: 249 VCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNV- 307
G D I +G + D VS N+L+ C +EM R +
Sbjct: 514 GLCEAGKLDEAFRIQKEILGRGCVMDRVSY-NTLISGCCGKKKLDEAFMFLDEMVKRGLK 572
Query: 308 ---VSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGREL 363
+++ +I G+ E + ++D R G+ P+ T+ ++ C A + G+E
Sbjct: 573 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 632
Query: 364 FDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMP---MEPTAALWGALLSACR 420
FD M K + P Y ++ R G + AL+L M + P +A + +L+
Sbjct: 633 FDEMMSK-NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 421 THGDREIAEIAAKE--LVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIKKV 477
E A++ +E + +EP N H+ L + Y + ++ KV L+RE H K V
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEP-NVFHYTALIDGYG---KLGQMVKVECLLREMHSKNV 746
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 120/247 (48%), Gaps = 33/247 (13%)
Query: 173 DVIVWNLMIQGYCKVGELETGLELFRRMGDR----SVVSWNLMISCLAKGKKEEEALVLF 228
DV ++ I +CK G++E ++LF +M + +VV++N +I L + +EA +
Sbjct: 259 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 318
Query: 229 REMLEKGFEPDDAT---LVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDF 285
+M+E+G EP T LV L R+G A ++ KGF +++ V N+L+D
Sbjct: 319 EKMVERGMEPTLITYSILVKGLTRAKRIGDA---YFVLKEMTKKGFPPNVI-VYNNLIDS 374
Query: 286 YCKCGNPQAGLSVFNEMPMRNV----VSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPN 340
+ + G+ + + + M + + ++N +I G NG + L ++M+ G N
Sbjct: 375 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 434
Query: 341 DSTFVGVLA-CCAHAGLVDRGRELFDSMAVKF---QLLPKLEHYGCVVDLL--GRCGHVR 394
+F V+ C+H +FDS A++F LL + G ++ L G C H +
Sbjct: 435 QGSFTSVICLLCSHL--------MFDS-ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGK 485
Query: 395 --EALDL 399
+AL+L
Sbjct: 486 HSKALEL 492
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 104/261 (39%), Gaps = 10/261 (3%)
Query: 75 FNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQV 134
+N++I C + F M R + PD +T+ L+ N+ +
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVK-RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 601
Query: 135 TTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDV----IVWNLMIQGYCKVGEL 190
G +++ ER + + FDEM ++V +V+N +I+ YC+ G L
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRL 661
Query: 191 ETGLELFRRMGDRSVVSWNLMISCLAKG----KKEEEALVLFREMLEKGFEPDDATLVTV 246
LEL M + + + + L KG + EEA +LF EM +G EP+ +
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 721
Query: 247 LPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRN 306
+ +LG E + + K + ++ ++ Y + GN + NEM +
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSKNVHPNKITY-TVMIGGYARDGNVTEASRLLNEMREKG 780
Query: 307 VVSWNAMISGMAYNGMGEVGV 327
+V + Y + + GV
Sbjct: 781 IVPDSITYKEFIYGYLKQGGV 801
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 140/354 (39%), Gaps = 52/354 (14%)
Query: 100 NARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERM 159
+ + I P+ +T+ +++ A RDF + + + G + ++EL +M
Sbjct: 251 SVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKM 310
Query: 160 GDAGKVFDEMRERDV----------IVWN-----------------------------LM 180
DA K+FDEMRER + I WN +
Sbjct: 311 SDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGAL 370
Query: 181 IQGYCKVGELETGLELFRRMGDRSV----VSWNLMISCLAKGKKEEEALVLFREMLEKGF 236
I G CKVGE+ L M + V V +N +I + +EA +++ M +KGF
Sbjct: 371 IDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGF 430
Query: 237 EPDDATLVTVLPVCARLGAAD-VGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAG 295
+ D T T+ RL D +W+ + G VS N L+D YCK GN +
Sbjct: 431 QADVFTCNTIASCFNRLKRYDEAKQWLFRMM-EGGVKLSTVSYTN-LIDVYCKEGNVEEA 488
Query: 296 LSVFNEMPMR----NVVSWNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLAC 350
+F EM + N +++N MI G + L +M G+ P+ T+ ++
Sbjct: 489 KRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHG 548
Query: 351 CAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMP 404
A VD LF M +K L Y ++ L + G EA L M
Sbjct: 549 ECIADNVDEAMRLFSEMGLK-GLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMK 601
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 124/289 (42%), Gaps = 15/289 (5%)
Query: 74 LFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQ 133
++ S+I ++ F LF + + +SP +T+ +L+ + + + L +
Sbjct: 331 VYTSLISWNCRKGNMKRAFLLFDEL-TEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNE 389
Query: 134 VTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRER----DVIVWNLMIQGYCKVGE 189
+ + G V +++ Y + +A ++D M ++ DV N + + ++
Sbjct: 390 MQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKR 449
Query: 190 LETGLE-LFRRMG---DRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVT 245
+ + LFR M S VS+ +I K EEA LF EM KG +P+ T
Sbjct: 450 YDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNV 509
Query: 246 VLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR 305
++ + G + + G D + SL+ C N + +F+EM ++
Sbjct: 510 MIYAYCKQGKIKEARKLRANMEANGMDPDSYTY-TSLIHGECIADNVDEAMRLFSEMGLK 568
Query: 306 ----NVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLA 349
N V++ MISG++ G + GL+++M R G T ++ + ++
Sbjct: 569 GLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIG 617
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 82/412 (19%), Positives = 151/412 (36%), Gaps = 82/412 (19%)
Query: 37 LHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIIL-FNSIIKACSLSPPF---QQCF 92
L S+Q A I+ C + + + NP+++ NS + LS P Q C
Sbjct: 26 LLSSDQEAARRITAC-----LVEKSTIGKLQSNPSLLFNLNSNVTRLVLSEPTLPTQSCI 80
Query: 93 HLFSLMRNARA-ISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVG--- 148
F L+R + + PD +L + R F +SL V GF + +G
Sbjct: 81 DFFKLLREFESNLKPDLTAVVTLSHRLYSNRRFNEMRSLLNSVVNDGFYKRPVEELGSAM 140
Query: 149 -------------------VVELYANCERMGDAGKVFDEM-------RERDVIVW----- 177
V +Y + + +VFD M ER IV+
Sbjct: 141 VDCDISEEKFEFFEKFFDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAK 200
Query: 178 ---------------------------NLMIQGYCKVGELETGLELFRRMGDRSV----V 206
++++G C+ GE+E +L + + +
Sbjct: 201 KRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAY 260
Query: 207 SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA 266
++N +I+ K + + + M + G + T ++ + + G E +
Sbjct: 261 TYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEM 320
Query: 267 NDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNV----VSWNAMISGMAYNG- 321
++G D V V SL+ + C+ GN + +F+E+ + + ++ A+I G+ G
Sbjct: 321 RERGIESD-VHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGE 379
Query: 322 MGEVGVGLFEDMVRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVK-FQ 372
MG + + E +GV F ++ G+VD ++D M K FQ
Sbjct: 380 MGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQ 431
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 92/216 (42%), Gaps = 13/216 (6%)
Query: 69 NPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQ 128
N ++FN++I + ++ +M + D FT ++ + L+ + +
Sbjct: 396 NITQVVFNTLIDGYCRKGMVDEASMIYDVMEQ-KGFQADVFTCNTIASCFNRLKRYDEAK 454
Query: 129 SLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDV----IVWNLMIQGY 184
++ G ++++Y + +A ++F EM + V I +N+MI Y
Sbjct: 455 QWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAY 514
Query: 185 CKVGELETGLELFRRMG----DRSVVSWNLMI--SCLAKGKKEEEALVLFREMLEKGFEP 238
CK G+++ +L M D ++ +I C+A +EA+ LF EM KG +
Sbjct: 515 CKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNV--DEAMRLFSEMGLKGLDQ 572
Query: 239 DDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRD 274
+ T ++ ++ G +D ++ KG+ D
Sbjct: 573 NSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTID 608
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 146/339 (43%), Gaps = 20/339 (5%)
Query: 47 FISVCASLHRVPYATRVFNHSP----NPNIILFNSIIKAC-SLSPPFQQCFHLFSLMRNA 101
IS A+ R A VF P +I +N I+ + P+ + L M+ +
Sbjct: 214 LISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMK-S 272
Query: 102 RAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGD 161
I+PD +T+ +L+ Q + ++ GF+ ++++Y R +
Sbjct: 273 DGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKE 332
Query: 162 AGKVFDEMR----ERDVIVWNLMIQGYCKVGELETGLELFRRMGDR----SVVSWNLMIS 213
A KV +EM ++ +N +I Y + G L+ +EL +M ++ V ++ ++S
Sbjct: 333 AMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392
Query: 214 CLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLR 273
+ K E A+ +F EM G +P+ T + + G I N G
Sbjct: 393 GFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSP 452
Query: 274 DIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVV----SWNAMISGMAYNGMGEVGVGL 329
DIV+ N+L+ + + G VF EM V ++N +IS + G E + +
Sbjct: 453 DIVT-WNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTV 511
Query: 330 FEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSM 367
+ M+ GVTP+ ST+ VLA A G+ ++ ++ M
Sbjct: 512 YRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM 550
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 153/357 (42%), Gaps = 22/357 (6%)
Query: 138 GFARHGPVRVGVVELYANCERMGDAGKVFDEMRER----DVIVWNLMIQGYCKVGELETG 193
GF+ ++ +AN R +A VF +M E +I +N+++ + K+G
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNK 262
Query: 194 L-ELFRRMGDRSVV----SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLP 248
+ L +M + ++N +I+C +G +EA +F EM GF D T +L
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLD 322
Query: 249 VCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR--- 305
V + + + GF IV+ NSL+ Y + G + + N+M +
Sbjct: 323 VYGKSHRPKEAMKVLNEMVLNGFSPSIVTY-NSLISAYARDGMLDEAMELKNQMAEKGTK 381
Query: 306 -NVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGREL 363
+V ++ ++SG G E + +FE+M G PN TF + + G ++
Sbjct: 382 PDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKI 441
Query: 364 FDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPME---PTAALWGALLSACR 420
FD + V L P + + ++ + G+ G E + + M P + L+SA
Sbjct: 442 FDEINV-CGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYS 500
Query: 421 THGDREIAEIAAKELVN--VEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLMREGHIK 475
G E A + +++ V P S ++ +L+ + M W++ EKV M +G K
Sbjct: 501 RCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGM-WEQSEKVLAEMEDGRCK 556
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/415 (20%), Positives = 162/415 (39%), Gaps = 62/415 (14%)
Query: 24 QLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFN----HSPNPNIILFNSII 79
+ Q+ G + + V HR A +V N + +P+I+ +NS+I
Sbjct: 297 EAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLI 356
Query: 80 KACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGF 139
A + + L + M + PD FT+ +LL GF
Sbjct: 357 SAYARDGMLDEAMELKNQMAE-KGTKPDVFTYTTLLS---------------------GF 394
Query: 140 ARHGPVRVGVVELYANCERMGDAGKVFDEMR----ERDVIVWNLMIQGYCKVGELETGLE 195
R G V A +F+EMR + ++ +N I+ Y G+ ++
Sbjct: 395 ERAGKVE--------------SAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMK 440
Query: 196 LFRRMG----DRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCA 251
+F + +V+WN +++ + + E +F+EM GF P+ T T++ +
Sbjct: 441 IFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYS 500
Query: 252 RLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMP----MRNV 307
R G+ + ++ D G D+ S N+++ + G + V EM N
Sbjct: 501 RCGSFEQAMTVYRRMLDAGVTPDL-STYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE 559
Query: 308 VSWNAMISGMAYNGMGEVGV--GLFEDMVRGVTPNDSTFVGVLA-CCAHAGLVDRGRELF 364
+++ +++ AY E+G+ L E++ GV + + L C+ L+ F
Sbjct: 560 LTYCSLLH--AYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAF 617
Query: 365 DSMAVKFQLLPKLEHYGCVVDLLGRCGHVREA---LDLIRSMPMEPTAALWGALL 416
+ + P + +V + GR V +A LD ++ P+ A + +L+
Sbjct: 618 SELKER-GFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 131/316 (41%), Gaps = 55/316 (17%)
Query: 23 TQLTQIHAHFLRHGLHHSNQILAHFISV---CASLHR-VPYATRVFNHSPNPNIILFNSI 78
++++ + R G + IS C S + + R+ + P++ +N++
Sbjct: 471 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTV 530
Query: 79 IKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLG 138
+ A + ++Q + + M + R P+ T+ SLL A +N ++ L SL +V +
Sbjct: 531 LAALARGGMWEQSEKVLAEMEDGRC-KPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGV 589
Query: 139 FARHGPVRVGVVELYANCERMGDAGKVFDEMRER----DVIVWNLMIQGYCKVGELETGL 194
+ +V + + C+ + +A + F E++ER D+ N M+ Y + +
Sbjct: 590 IEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKAN 649
Query: 195 ELFRRMGDR----SVVSWNLMISCLAK----GKKEEEALVLFREMLEKGFEPDDATLVTV 246
+ M +R S+ ++N ++ ++ GK EE + RE+L KG +PD + TV
Sbjct: 650 GVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEE----ILREILAKGIKPDIISYNTV 705
Query: 247 L-PVCARLGAADVGE-------------------WIHSYANDK------GFLRDIVSVG- 279
+ C D +I SYA D G +R ++ G
Sbjct: 706 IYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGC 765
Query: 280 -------NSLVDFYCK 288
NS+VD YCK
Sbjct: 766 RPNQNTYNSIVDGYCK 781
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 83/206 (40%), Gaps = 9/206 (4%)
Query: 60 ATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAAS 119
A V++ P +L +++ CS + FS ++ R SPD T S++
Sbjct: 582 AEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKE-RGFSPDITTLNSMVSIYG 640
Query: 120 NLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRER----DVI 175
+ + + GF ++ +++ G + ++ E+ + D+I
Sbjct: 641 RRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDII 700
Query: 176 VWNLMIQGYCKVGELETGLELFRRMGDR----SVVSWNLMISCLAKGKKEEEALVLFREM 231
+N +I YC+ + +F M + V+++N I A EEA+ + R M
Sbjct: 701 SYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYM 760
Query: 232 LEKGFEPDDATLVTVLPVCARLGAAD 257
++ G P+ T +++ +L D
Sbjct: 761 IKHGCRPNQNTYNSIVDGYCKLNRKD 786
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/419 (21%), Positives = 190/419 (45%), Gaps = 32/419 (7%)
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQS 129
PN + +N+++ ++ F + LM+ + PD T+ L+ N + G
Sbjct: 273 PNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVL-PDLCTYNILINGLCNAGSMREGLE 331
Query: 130 LHAQVTTLGFARHGPVRVGVVELYANCERMG---DAGKVFDEMRERDV----IVWNLMIQ 182
L + +L P V L C +G +A K+ ++M V + N+ ++
Sbjct: 332 LMDAMKSLKLQ---PDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLK 388
Query: 183 GYCKVGELETGLELFRRMGDR-----SVVSWNLMISCLAKGKKEEEALVLFREMLEKGFE 237
CK + E + + D +V+++ +I K AL + REM +KG +
Sbjct: 389 WLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIK 448
Query: 238 PDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLS 297
+ TL T+L + D + + A+ +GF+ D V+ G ++ F+ + + L
Sbjct: 449 MNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFF-REEKVEKALE 507
Query: 298 VFNEMP----MRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCA 352
+++EM V ++N++I G+ ++G E+ + F+++ G+ P+DSTF ++
Sbjct: 508 MWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYC 567
Query: 353 HAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRC--GHVREALDLIRSM--PMEPT 408
G V++ E ++ ++K P ++Y C + L G C G +AL+ ++ E
Sbjct: 568 KEGRVEKAFEFYNE-SIKHSFKP--DNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVD 624
Query: 409 AALWGALLSA-CRTHGDREIAEIAAK-ELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKV 465
+ ++SA C+ +E ++ ++ E +EP ++ +S + E+ + E +++
Sbjct: 625 TVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFIS-LLMEDGKLSETDEL 682
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 159/386 (41%), Gaps = 67/386 (17%)
Query: 71 NIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSL 130
N+ FN ++ L + + M + ++PD T+ ++LKA S + G+
Sbjct: 203 NVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMS-----KKGRLS 257
Query: 131 HAQVTTLGFARHG--PVRVGVVEL-YANCE--RMGDAGKVFDEMRERDVI----VWNLMI 181
+ L ++G P RV L Y C+ + +A ++ + M++ +V+ +N++I
Sbjct: 258 DLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILI 317
Query: 182 QGYCKVGELETGLELFRRMG----DRSVVSWNLMIS-CLAKGKKEEEALVLFREMLEKGF 236
G C G + GLEL M VV++N +I C G EA L +M G
Sbjct: 318 NGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELG-LSLEARKLMEQMENDGV 376
Query: 237 EPDDAT-LVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAG 295
+ + T +++ +C V + + GF DIV+ ++L+ Y K G+
Sbjct: 377 KANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTY-HTLIKAYLKVGDLSGA 435
Query: 296 LSVFNEMPMR----NVVSWNAMISGM--------AYNGM---------------GEVGVG 328
L + EM + N ++ N ++ + A+N + G + +G
Sbjct: 436 LEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMG 495
Query: 329 LF-EDMVR------------GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLP 375
F E+ V +TP STF ++ H G + E FD +A + LLP
Sbjct: 496 FFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELA-ESGLLP 554
Query: 376 KLEHYGCVVDLLGRC--GHVREALDL 399
+ ++ LG C G V +A +
Sbjct: 555 DDSTFNSII--LGYCKEGRVEKAFEF 578
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 151/357 (42%), Gaps = 49/357 (13%)
Query: 147 VGVVELYANCERMGDAGKVFDEMRE----RDVIVWNLMIQGYCKVGELETGLELFRRMGD 202
+G+V Y + + A +VFD+M + +V +N+++ GYC G+LE L + RM
Sbjct: 174 IGLVR-YPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVS 232
Query: 203 R-----SVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAAD 257
V++N ++ ++K + + L +M + G P+ T ++ +LG+
Sbjct: 233 EFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLK 292
Query: 258 VGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMP----MRNVVSWNAM 313
I L D+ + N L++ C G+ + GL + + M +VV++N +
Sbjct: 293 EAFQIVELMKQTNVLPDLCTY-NILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTL 351
Query: 314 ISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTF-VGVLACCAH---AGLVDRGRELFDSMA 368
I G G+ L E M GV N T + + C + + +EL D
Sbjct: 352 IDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHG 411
Query: 369 VKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPME----PTAALWGALLSACRTHGD 424
P + Y ++ + G + AL+++R M + T L L + C+ +
Sbjct: 412 FS----PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCK---E 464
Query: 425 REIAEIAAKELVN--------VEPWNSGHHVLLSNIYAEEM------RWDEVEKVRV 467
R++ E A L+N V+ G L+ + EE WDE++KV++
Sbjct: 465 RKLDE--AHNLLNSAHKRGFIVDEVTYG--TLIMGFFREEKVEKALEMWDEMKKVKI 517
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 155/364 (42%), Gaps = 18/364 (4%)
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQS 129
P+ + + S+I + + +F + R + P + + +++ + F S
Sbjct: 271 PDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRV-PCTYAYNTMIMGYGSAGKFDEAYS 329
Query: 130 LHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRER---DVIVWNLMIQGYCK 186
L + G ++ ++ +A KVF+EM++ ++ +N++I C+
Sbjct: 330 LLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCR 389
Query: 187 VGELETGLELFRRMGDR----SVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDAT 242
G+L+T EL M +V + N+M+ L K +K +EA +F EM K PD+ T
Sbjct: 390 AGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEIT 449
Query: 243 LVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEM 302
+++ ++G D ++ D R V SL+ + G + G ++ +M
Sbjct: 450 FCSLIDGLGKVGRVDDAYKVYEKMLDSD-CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508
Query: 303 PMRNVVS----WNAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGLV 357
+N N + M G E G +FE++ R P+ ++ ++ AG
Sbjct: 509 INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFA 568
Query: 358 DRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMP---MEPTAALWGA 414
+ ELF SM + +L Y V+D +CG V +A L+ M EPT +G+
Sbjct: 569 NETYELFYSMKEQGCVLDT-RAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGS 627
Query: 415 LLSA 418
++
Sbjct: 628 VIDG 631
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 86/423 (20%), Positives = 181/423 (42%), Gaps = 32/423 (7%)
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQS 129
P++ ++ C + ++ + + +MR + P + + +L+ A S + + +
Sbjct: 131 PSVNTCIEMVLGCVKANKLREGYDVVQMMRKFK-FRPAFSAYTTLIGAFSAVNHSDMMLT 189
Query: 130 LHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMR----ERDVIVWNLMIQGYC 185
L Q+ LG+ + ++ +A R+ A + DEM+ + D++++N+ I +
Sbjct: 190 LFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFG 249
Query: 186 KVGELETGLELFRRMGDRSV----VSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDA 241
KVG+++ + F + + V++ MI L K + +EA+ +F + + P
Sbjct: 250 KVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTY 309
Query: 242 TLVTVLPVCARLGAADVGEWIHSYA-----NDKGFLRDIVSVGNSLVDFYCKCGNPQAGL 296
T++ +G G++ +Y+ KG + +++ N ++ K G L
Sbjct: 310 AYNTMI-----MGYGSAGKFDEAYSLLERQRAKGSIPSVIAY-NCILTCLRKMGKVDEAL 363
Query: 297 SVFNEMPMR---NVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCA 352
VF EM N+ ++N +I + G + L + M + G+ PN T ++
Sbjct: 364 KVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLC 423
Query: 353 HAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSM---PMEPTA 409
+ +D +F+ M K P + ++D LG+ G V +A + M +
Sbjct: 424 KSQKLDEACAMFEEMDYKV-CTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNS 482
Query: 410 ALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEM-RWDEVEKVRVL 468
++ +L+ HG +E K+++N N + L N Y + M + E EK R +
Sbjct: 483 IVYTSLIKNFFNHGRKEDGHKIYKDMIN---QNCSPDLQLLNTYMDCMFKAGEPEKGRAM 539
Query: 469 MRE 471
E
Sbjct: 540 FEE 542
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 85/409 (20%), Positives = 162/409 (39%), Gaps = 59/409 (14%)
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQS 129
PN+ N ++ S + +F M + + +PD TF SL+ +
Sbjct: 410 PNVRTVNIMVDRLCKSQKLDEACAMFEEM-DYKVCTPDEITFCSLIDGLGKVGRVDDAYK 468
Query: 130 LHAQV------------TTL--GFARHGPVRVG-----------------VVELYANCER 158
++ ++ T+L F HG G ++ Y +C
Sbjct: 469 VYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDC-- 526
Query: 159 MGDAGK------VFDEMRER----DVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV-- 206
M AG+ +F+E++ R D ++++I G K G ELF M ++ V
Sbjct: 527 MFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLD 586
Query: 207 --SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHS 264
++N++I K K +A L EM KGFEP T +V+ A++ D +
Sbjct: 587 TRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFE 646
Query: 265 YANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR----NVVSWNAMISGMAYN 320
A K ++V + +SL+D + K G + E+ + N+ +WN+++ +
Sbjct: 647 EAKSKRIELNVV-IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKA 705
Query: 321 GMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEH 379
+ F+ M TPN T+ ++ ++ + M K + P
Sbjct: 706 EEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQ-KQGMKPSTIS 764
Query: 380 YGCVVDLLGRCGHVREA---LDLIRSMPMEPTAALWGALLSACRTHGDR 425
Y ++ L + G++ EA D ++ P +A + A++ ++G+R
Sbjct: 765 YTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGL-SNGNR 812
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 96/222 (43%), Gaps = 13/222 (5%)
Query: 130 LHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMR----ERDVIVWNLMIQGYC 185
L ++ T GF V++ A +R+ +A +F+E + E +V++++ +I G+
Sbjct: 609 LLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFG 668
Query: 186 KVGELETGL----ELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDA 241
KVG ++ EL ++ ++ +WN ++ L K ++ EALV F+ M E P+
Sbjct: 669 KVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQV 728
Query: 242 TLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNE 301
T ++ ++ + +G +S +++ K GN ++F+
Sbjct: 729 TYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISY-TTMISGLAKAGNIAEAGALFDR 787
Query: 302 MPMRNVVS----WNAMISGMAYNGMGEVGVGLFEDMVRGVTP 339
V +NAMI G++ LFE+ R P
Sbjct: 788 FKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLP 829
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 120/289 (41%), Gaps = 50/289 (17%)
Query: 69 NPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQ 128
NPN++ FN++I A F + L M R+I PD FT+ SL+
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK-RSIDPDIFTYNSLIN------------ 298
Query: 129 SLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVI----VWNLMIQGY 184
GF H +R+ A ++F+ M +D +N +I+G+
Sbjct: 299 ---------GFCMH--------------DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF 335
Query: 185 CKVGELETGLELFRRMGDRSV----VSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDD 240
CK +E G ELFR M R + V++ +I L + A +F++M+ G PD
Sbjct: 336 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 395
Query: 241 ATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFN 300
T +L G + + Y DI + ++++ CK G G +F
Sbjct: 396 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY-IYTTMIEGMCKAGKVDDGWDLFC 454
Query: 301 EMPMR----NVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTF 344
+ ++ NVV++N MISG+ + + L + M G P+ T+
Sbjct: 455 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTY 503
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 144/339 (42%), Gaps = 65/339 (19%)
Query: 106 PDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKV 165
P F F LL A + ++ F L SL ++ LG + + LY
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHN---------LYT----------- 47
Query: 166 FDEMRERDVIVWNLMIQGYCKVGELETGLELFRRM----GDRSVVSWNLMISCLAKGKKE 221
+N++I +C+ ++ L L +M + S+V+ + +++ GK+
Sbjct: 48 -----------YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 96
Query: 222 EEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYAND----------KGF 271
+A+ L +M+E G+ PD T T++ G ++H+ A++ +G
Sbjct: 97 SDAVALVDQMVEMGYRPDTITFTTLIH----------GLFLHNKASEAVALVDRMVQRGC 146
Query: 272 LRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPM----RNVVSWNAMISGMAYNGMGEVGV 327
++V+ G +V+ CK G+ ++ N+M +VV +N +I + + +
Sbjct: 147 QPNLVTYG-VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 205
Query: 328 GLFEDM-VRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDL 386
LF++M +G+ PN T+ +++C G +L M K ++ P L + ++D
Sbjct: 206 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK-KINPNLVTFNALIDA 264
Query: 387 LGRCGHVREALDLIRSM---PMEPTAALWGALLSACRTH 422
+ G EA L M ++P + +L++ H
Sbjct: 265 FVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 303
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 94/193 (48%), Gaps = 9/193 (4%)
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQS 129
P++ +N++IK S + LF M + R + D T+ +L++ + D Q
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSH-RGLVGDTVTYTTLIQGLFHDGDCDNAQK 381
Query: 130 LHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRER----DVIVWNLMIQGYC 185
+ Q+ + G +++ N ++ A +VFD M++ D+ ++ MI+G C
Sbjct: 382 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 441
Query: 186 KVGELETGLELFRRMGDR----SVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDA 241
K G+++ G +LF + + +VV++N MIS L + +EA L ++M E G PD
Sbjct: 442 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSG 501
Query: 242 TLVTVLPVCARLG 254
T T++ R G
Sbjct: 502 TYNTLIRAHLRDG 514
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 110/485 (22%), Positives = 200/485 (41%), Gaps = 64/485 (13%)
Query: 56 RVPYATRVFN----HSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTF 111
+V A VF + P + +N+I+ S F Q ++ MR+ R I+PD ++F
Sbjct: 91 KVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRD-RGITPDVYSF 149
Query: 112 P-------------SLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYAN--- 155
+ L+ +N+ ++ A T +G + EL+
Sbjct: 150 TIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLA 209
Query: 156 -----------------CER--MGDAGKVFDEMRERDVI----VWNLMIQGYCKVGELET 192
C++ + + K+ D++ +R V+ +NL IQG C+ GEL+
Sbjct: 210 SGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDG 269
Query: 193 GLE----LFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLP 248
+ L + V+++N +I L K K +EA V +M+ +G EPD T T++
Sbjct: 270 AVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIA 329
Query: 249 VCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR--- 305
+ G + E I A GF+ D + SL+D C G L++FNE +
Sbjct: 330 GYCKGGMVQLAERIVGDAVFNGFVPDQFTY-RSLIDGLCHEGETNRALALFNEALGKGIK 388
Query: 306 -NVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGREL 363
NV+ +N +I G++ GM L +M +G+ P TF ++ G V L
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448
Query: 364 FDSMAVKFQLLPKLEHYGCVVDLLG---RCGHVREALDLIRSMPMEPTAALWGALLSA-C 419
M K P + + ++ + + E LD++ ++P + +LL+ C
Sbjct: 449 VKVMISK-GYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLC 507
Query: 420 RTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEM-RWDEVEKVRVLMREGHIKKVP 478
+T ++ E K +V ++ NI E + R+ ++++ L+ E K V
Sbjct: 508 KTSKFEDVME-TYKTMVE---KGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVN 563
Query: 479 GQSAT 483
+ T
Sbjct: 564 PDAVT 568
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 95/426 (22%), Positives = 171/426 (40%), Gaps = 80/426 (18%)
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKA---------ASN 120
PN+IL+N++IK S + L + M + + + P+ TF L+ A
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEM-SEKGLIPEVQTFNILVNGLCKMGCVSDADG 447
Query: 121 LRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRER----DVIV 176
L + + + T HG Y+ +M +A ++ D M + DV
Sbjct: 448 LVKVMISKGYFPDIFTFNILIHG---------YSTQLKMENALEILDVMLDNGVDPDVYT 498
Query: 177 WNLMIQGYCKVGELETGLELFRRMGDR----SVVSWNLMISCLAKGKKEEEALVLFREML 232
+N ++ G CK + E +E ++ M ++ ++ ++N+++ L + +K +EAL L EM
Sbjct: 499 YNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMK 558
Query: 233 EKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNP 292
K PD T T L+D +CK G+
Sbjct: 559 NKSVNPDAVTFGT------------------------------------LIDGFCKNGDL 582
Query: 293 QAGLSVFNEMPMRNVVS-----WNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVG 346
++F +M VS +N +I + LF++MV R + P+ T+
Sbjct: 583 DGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRL 642
Query: 347 VLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSMPME 406
++ G V+ G + M ++ +P L G V++ L V EA +I M +
Sbjct: 643 MVDGFCKTGNVNLGYKFLLEM-MENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701
Query: 407 PTAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGHHVLLSNIYAEEMRWDEVEKVR 466
G + A T D + E+AA +LV +E + YA E+ +D + R
Sbjct: 702 ------GLVPEAVNTICDVDKKEVAAPKLV-LEDLLKKSCI---TYYAYELLFDGLRDKR 751
Query: 467 VLMREG 472
+ ++G
Sbjct: 752 LRKKKG 757
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 121/277 (43%), Gaps = 20/277 (7%)
Query: 163 GKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDR-------SVVSWNLMISCL 215
GK+ +E E D +N +I GYCK G ++ R +GD ++ +I L
Sbjct: 310 GKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAE---RIVGDAVFNGFVPDQFTYRSLIDGL 366
Query: 216 AKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDI 275
+ AL LF E L KG +P+ T++ + G + + ++KG + ++
Sbjct: 367 CHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEV 426
Query: 276 VSVGNSLVDFYCK--CGNPQAGL--SVFNEMPMRNVVSWNAMISGMAYNGMGEVGVGLFE 331
+ N LV+ CK C + GL + ++ ++ ++N +I G + E + + +
Sbjct: 427 QTF-NILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILD 485
Query: 332 DMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRC 390
M+ GV P+ T+ +L + E + +M K P L + +++ L R
Sbjct: 486 VMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK-GCAPNLFTFNILLESLCRY 544
Query: 391 GHVREALDLIRSMP---MEPTAALWGALLSACRTHGD 424
+ EAL L+ M + P A +G L+ +GD
Sbjct: 545 RKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 171/402 (42%), Gaps = 30/402 (7%)
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQS 129
PNI +N ++ ++ S + A + PD+FT+ SL+ +D
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEA-GLDPDFFTYTSLIMGYCQRKDLDSAFK 274
Query: 130 LHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERD----VIVWNLMIQGYC 185
+ ++ G R+ ++ R+ +A +F +M++ + V + ++I+ C
Sbjct: 275 VFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLC 334
Query: 186 KVGELETGLELFRRMGDRSVV----SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDA 241
L L + M + + ++ ++I L K E+A L +MLEKG P+
Sbjct: 335 GSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVI 394
Query: 242 TLVTVLPVCARLG----AADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLS 297
T ++ + G A DV E + S L N L+ YCK N +
Sbjct: 395 TYNALINGYCKRGMIEDAVDVVELMESRK-----LSPNTRTYNELIKGYCK-SNVHKAMG 448
Query: 298 VFNEMPMR----NVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFVGVLACCA 352
V N+M R +VV++N++I G +G + L M RG+ P+ T+ ++
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 508
Query: 353 HAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREA---LDLIRSMPMEPTA 409
+ V+ +LFDS+ K + P + Y ++D + G V EA L+ + S P +
Sbjct: 509 KSKRVEEACDLFDSLEQK-GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNS 567
Query: 410 ALWGALLSACRTHGDREIAEIAAKELVNV--EPWNSGHHVLL 449
+ AL+ G + A + +++V + +P S +L+
Sbjct: 568 LTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILI 609
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 156/383 (40%), Gaps = 27/383 (7%)
Query: 60 ATRVFNHSP----NPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLL 115
A +VFN P N + + +I ++ + LF M++ P T+ L+
Sbjct: 272 AFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECF-PTVRTYTVLI 330
Query: 116 KAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRER--- 172
K+ +L ++ G + +++ + + A ++ +M E+
Sbjct: 331 KSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLM 390
Query: 173 -DVIVWNLMIQGYCKVGELETGLELFRRMGDRSVV----SWNLMISCLAKGKKEEEALVL 227
+VI +N +I GYCK G +E +++ M R + ++N +I K +A+ +
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNV-HKAMGV 449
Query: 228 FREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYC 287
+MLE+ PD T +++ R G D + S ND+G + D + S++D C
Sbjct: 450 LNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTY-TSMIDSLC 508
Query: 288 KCGNPQAGLSVFNEMPMR----NVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDS 342
K + +F+ + + NVV + A+I G G + + E M+ + PN
Sbjct: 509 KSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSL 568
Query: 343 TFVGVL-ACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIR 401
TF ++ CA L + L + VK L P + ++ L + G A +
Sbjct: 569 TFNALIHGLCADGKL--KEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQ 626
Query: 402 SM---PMEPTAALWGALLSA-CR 420
M +P A + + CR
Sbjct: 627 QMLSSGTKPDAHTYTTFIQTYCR 649
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 127/343 (37%), Gaps = 79/343 (23%)
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQS 129
PN+I +N++I + + LM +R +SP+ T+ L+K
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELME-SRKLSPNTRTYNELIK------------- 436
Query: 130 LHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGE 189
G+ + + MG K+ + DV+ +N +I G C+ G
Sbjct: 437 --------GYCKSNVHKA-----------MGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 190 LETGLELFRRMGDRSVV----SWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVT 245
++ L M DR +V ++ MI L K K+ EEA LF + +KG P+
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPN------ 531
Query: 246 VLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR 305
V + +L+D YCK G + +M +
Sbjct: 532 ------------------------------VVMYTALIDGYCKAGKVDEAHLMLEKMLSK 561
Query: 306 NV----VSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRG 360
N +++NA+I G+ +G + L E MV+ G+ P ST ++ G D
Sbjct: 562 NCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHA 621
Query: 361 RELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSM 403
F M + P Y + R G + +A D++ M
Sbjct: 622 YSRFQQM-LSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKM 663
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 148/364 (40%), Gaps = 53/364 (14%)
Query: 49 SVCASLHRVPYATRVFN----HSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAI 104
S+C S RV A +F+ NPN++++ ++I + + + M + +
Sbjct: 506 SLCKS-KRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL 564
Query: 105 SPDYFTFPSL---------LKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVE-LYA 154
P+ TF +L LK A+ L + + L V+T H ++ G + Y+
Sbjct: 565 -PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYS 623
Query: 155 NCERMGDAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSVVSWNLMISC 214
++M +G + D + IQ YC+ G L ++ +M + V S
Sbjct: 624 RFQQMLSSGT------KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSS 677
Query: 215 LAKGK----KEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKG 270
L KG + A + + M + G EP T ++++ + Y KG
Sbjct: 678 LIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEM----------KYGKQKG 727
Query: 271 FLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVV----SWNAMISGMAYNGMGEVG 326
++ ++ N +++F + + +M +V S+ +I G+ G V
Sbjct: 728 SEPELCAMSN-MMEF-------DTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVA 779
Query: 327 VGLFEDMVR--GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVV 384
+F+ M R G++P++ F +L+CC + ++ D M + LP+LE C V
Sbjct: 780 EKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDM-ICVGHLPQLE--SCKV 836
Query: 385 DLLG 388
+ G
Sbjct: 837 LICG 840
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 154/363 (42%), Gaps = 22/363 (6%)
Query: 56 RVPYATRVFNHSPN----PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTF 111
R + R+F P+ ++ N+++ + F +F + + I+P+ FT
Sbjct: 135 RYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTC 194
Query: 112 PSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRE 171
L+KA D + + ++ ++G + ++ Y M A +V +EM +
Sbjct: 195 NLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLD 254
Query: 172 R----DVIVWNLMIQGYCKVGELETGLELFRRMGDRSV----VSWNLMISCLAKGKKEEE 223
R D + +++ GYCK+G + M + V++ +MI L K KK E
Sbjct: 255 RGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGE 314
Query: 224 ALVLFREMLEKGFEPDDATLVTVLPVCARLGAAD--VGEWIHSYANDKGFLRDIVSVGNS 281
A +F EMLE+ F PD + V+ D G W N+ ++S +
Sbjct: 315 ARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLS---T 371
Query: 282 LVDFYCKCGNPQAGLSVFNEM---PMRNVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGV 337
L+ + CK G +F+E + +++++N +I+GM G L++DM R
Sbjct: 372 LIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKC 431
Query: 338 TPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREAL 397
PN T+ ++ + G V G + + M ++ P + + + L + G +A+
Sbjct: 432 KPNAFTYNVLIEGLSKNGNVKEGVRVLEEM-LEIGCFPNKTTFLILFEGLQKLGKEEDAM 490
Query: 398 DLI 400
++
Sbjct: 491 KIV 493
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 110/505 (21%), Positives = 195/505 (38%), Gaps = 91/505 (18%)
Query: 55 HRVPYATRVFNHSP----NPNIILFNSIIKACSLSPPFQQCFHLFSLMRNAR-------- 102
H++ ++ F P+++ FN+++ L + LF M
Sbjct: 155 HKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALF 214
Query: 103 ------AISPDYFTFPSLLKA---------ASNLRDFQLGQSLHAQVTTLGFARHGPVRV 147
++P TF +L+ A+ L + +G+ LH V T G +G ++
Sbjct: 215 DQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKM 274
Query: 148 G--------------------VVELYANCERM------GDAGKVFDEMRER----DVIVW 177
G VV A +R+ DA +F EM E+ +V +
Sbjct: 275 GDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTY 334
Query: 178 NLMIQGYCKVGELETGLELFRRMGDR----SVVSWNLMISCLAKGKKEEEALVLFREMLE 233
N MI G+C G L R M +R V+++N +IS K K EA L EML
Sbjct: 335 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 394
Query: 234 KGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDI-----VSVGNSLVDFYCK 288
+ PD T +++ G H+ +D + D+ V N+++D YC+
Sbjct: 395 RCIFPDTVTYNSMI----------YGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCR 444
Query: 289 CGNPQAGLSVFNEMPMR----NVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDST 343
G+ + E+ R N ++N +I G LF++M+ GV P+ T
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504
Query: 344 FVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSM 403
+L ++ ELF+ + + L + Y ++ + + V EA DL S+
Sbjct: 505 CNILLYGFCENEKLEEALELFEVIQMSKIDLDTVA-YNIIIHGMCKGSKVDEAWDLFCSL 563
Query: 404 PM---EPTAALWGALLSACRTHGDREIAEIAAKELVNV--EPWNSGHHVLLSNIYAEEMR 458
P+ EP + ++S A + ++ + EP NS ++ L+ ++
Sbjct: 564 PIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGC----LK 619
Query: 459 WDEVEKVRVLMREGHIKKVPGQSAT 483
E++K L+ E G + T
Sbjct: 620 AGEIDKSIELISEMRSNGFSGDAFT 644
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 100/252 (39%), Gaps = 48/252 (19%)
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQS 129
P+ + +NS+I F H+F LM SPD TF +++ + G
Sbjct: 399 PDTVTYNSMIYGFCKHNRFDDAKHMFDLMA-----SPDVVTFNTIIDVYCRAKRVDEGMQ 453
Query: 130 LHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRER----DVIVWNLMIQGYC 185
L +++ G + ++ + + + A +F EM D I N+++ G+C
Sbjct: 454 LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 513
Query: 186 KVGELETGLELFRRMG----DRSVVSWNLMISCLAKGKKEEEAL---------------- 225
+ +LE LELF + D V++N++I + KG K +EA
Sbjct: 514 ENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQ 573
Query: 226 -------------------VLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA 266
VLF +M + G EPD++T T++ C + G D + S
Sbjct: 574 TYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Query: 267 NDKGFLRDIVSV 278
GF D ++
Sbjct: 634 RSNGFSGDAFTI 645
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 145/345 (42%), Gaps = 34/345 (9%)
Query: 157 ERMGDAGKVFDEM-RER---DVIVWNLMIQGYCKVGELETGLELFRRMGDR----SVVSW 208
+ + DA FD M R R + N +I + ++ + + L+R+M R ++ S+
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 209 NLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYAND 268
N++I C K +L F ++ + GF+PD T T+L + Y +
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 269 KGFLR------DIVSVG--------NSLVDFYCKCGNPQAGLSVFNEMPMR----NVVSW 310
GFL +V +G N+L++ C G ++ N+M + +VV++
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264
Query: 311 NAMISGMAYNGMGEVGVGLFEDMVRG-VTPNDSTFVGVLACCAHAGLVDRGRELFDSMAV 369
+++GM G + + L M + P+ + ++ G + LF M
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 370 KFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSM---PMEPTAALWGALLSACRTHGDRE 426
K + P + Y C++D G +A L+R M + P + AL+SA G
Sbjct: 325 K-GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 427 IAEIAAKELVN--VEPWNSGHHVLLSNIYAEEMRWDEVEKVRVLM 469
AE E+++ + P ++ ++ + + R+D+ + + LM
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYG-FCKHNRFDDAKHMFDLM 427
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 110/505 (21%), Positives = 195/505 (38%), Gaps = 91/505 (18%)
Query: 55 HRVPYATRVFNHSP----NPNIILFNSIIKACSLSPPFQQCFHLFSLMRNAR-------- 102
H++ ++ F P+++ FN+++ L + LF M
Sbjct: 155 HKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALF 214
Query: 103 ------AISPDYFTFPSLLKA---------ASNLRDFQLGQSLHAQVTTLGFARHGPVRV 147
++P TF +L+ A+ L + +G+ LH V T G +G ++
Sbjct: 215 DQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKM 274
Query: 148 G--------------------VVELYANCERM------GDAGKVFDEMRER----DVIVW 177
G VV A +R+ DA +F EM E+ +V +
Sbjct: 275 GDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTY 334
Query: 178 NLMIQGYCKVGELETGLELFRRMGDR----SVVSWNLMISCLAKGKKEEEALVLFREMLE 233
N MI G+C G L R M +R V+++N +IS K K EA L EML
Sbjct: 335 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 394
Query: 234 KGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDI-----VSVGNSLVDFYCK 288
+ PD T +++ G H+ +D + D+ V N+++D YC+
Sbjct: 395 RCIFPDTVTYNSMI----------YGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCR 444
Query: 289 CGNPQAGLSVFNEMPMR----NVVSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDST 343
G+ + E+ R N ++N +I G LF++M+ GV P+ T
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504
Query: 344 FVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSM 403
+L ++ ELF+ + + L + Y ++ + + V EA DL S+
Sbjct: 505 CNILLYGFCENEKLEEALELFEVIQMSKIDLDTVA-YNIIIHGMCKGSKVDEAWDLFCSL 563
Query: 404 PM---EPTAALWGALLSACRTHGDREIAEIAAKELVNV--EPWNSGHHVLLSNIYAEEMR 458
P+ EP + ++S A + ++ + EP NS ++ L+ ++
Sbjct: 564 PIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGC----LK 619
Query: 459 WDEVEKVRVLMREGHIKKVPGQSAT 483
E++K L+ E G + T
Sbjct: 620 AGEIDKSIELISEMRSNGFSGDAFT 644
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 100/252 (39%), Gaps = 48/252 (19%)
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQS 129
P+ + +NS+I F H+F LM SPD TF +++ + G
Sbjct: 399 PDTVTYNSMIYGFCKHNRFDDAKHMFDLM-----ASPDVVTFNTIIDVYCRAKRVDEGMQ 453
Query: 130 LHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRER----DVIVWNLMIQGYC 185
L +++ G + ++ + + + A +F EM D I N+++ G+C
Sbjct: 454 LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 513
Query: 186 KVGELETGLELFRRMG----DRSVVSWNLMISCLAKGKKEEEAL---------------- 225
+ +LE LELF + D V++N++I + KG K +EA
Sbjct: 514 ENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQ 573
Query: 226 -------------------VLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYA 266
VLF +M + G EPD++T T++ C + G D + S
Sbjct: 574 TYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Query: 267 NDKGFLRDIVSV 278
GF D ++
Sbjct: 634 RSNGFSGDAFTI 645
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 127/308 (41%), Gaps = 31/308 (10%)
Query: 159 MGDAGKVFDEM-RER---DVIVWNLMIQGYCKVGELETGLELFRRMGDR----SVVSWNL 210
+ DA FD M R R + N +I + ++ + + L+R+M R ++ S+N+
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 211 MISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKG 270
+I C K +L F ++ + GF+PD T T+L + Y + G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 271 FLR------DIVSVG--------NSLVDFYCKCGNPQAGLSVFNEMPMR----NVVSWNA 312
FL +V +G N+L++ C G ++ N+M + +VV++
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 313 MISGMAYNGMGEVGVGLFEDMVRG-VTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKF 371
+++GM G + + L M + P+ + ++ G + LF M K
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK- 325
Query: 372 QLLPKLEHYGCVVDLLGRCGHVREALDLIRSM---PMEPTAALWGALLSACRTHGDREIA 428
+ P + Y C++D G +A L+R M + P + AL+SA G A
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA 385
Query: 429 EIAAKELV 436
E E++
Sbjct: 386 EKLCDEML 393
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 151/341 (44%), Gaps = 19/341 (5%)
Query: 94 LFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELY 153
LF +M +R P F LL A + + F L S ++ LG + + ++ +
Sbjct: 65 LFGVMAQSRPF-PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCF 123
Query: 154 ANCERMGDA----GKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDR----SV 205
C R+ A GK+ E D++ N ++ G+C + + L +M +
Sbjct: 124 CRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDT 183
Query: 206 VSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSY 265
V++ +I L K EA+ L M+++G +PD T V+ + G D+ + +
Sbjct: 184 VTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNK 243
Query: 266 ANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR----NVVSWNAMISGMAYNG 321
++V + ++++D CK + L++F EM + NV++++++IS + G
Sbjct: 244 MEAAKIEANVV-IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYG 302
Query: 322 MGEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHY 380
L DM+ R + PN TF ++ G + + +L++ M +K + P + Y
Sbjct: 303 RWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEM-IKRSIDPNIFTY 361
Query: 381 GCVVD---LLGRCGHVREALDLIRSMPMEPTAALWGALLSA 418
+++ +L R G ++ L+L+ P + L++
Sbjct: 362 SSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLING 402
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 107/243 (44%), Gaps = 10/243 (4%)
Query: 61 TRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASN 120
T + N PN+I ++S+I + L S M R I+P+ TF +L+ A
Sbjct: 277 TEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIE-RKINPNLVTFSALIDAFVK 335
Query: 121 LRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERD----VIV 176
+ L+ ++ + ++ + +R+G+A ++ + M +D V+
Sbjct: 336 KGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVT 395
Query: 177 WNLMIQGYCKVGELETGLELFRRMGDR----SVVSWNLMISCLAKGKKEEEALVLFREML 232
+N +I G+CK ++ G+ELFR M R + V++ +I + + + A ++F++M+
Sbjct: 396 YNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 455
Query: 233 EKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNP 292
G P+ T +L + G + Y DI + N +++ CK G
Sbjct: 456 SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY-NIMIEGMCKAGKW 514
Query: 293 QAG 295
+ G
Sbjct: 515 KMG 517
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/313 (20%), Positives = 136/313 (43%), Gaps = 50/313 (15%)
Query: 71 NIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQSL 130
N+++++++I + +LF+ M N + + P+ T+ SL+ N + L
Sbjct: 252 NVVIYSTVIDSLCKYRHEDDALNLFTEMEN-KGVRPNVITYSSLISCLCNYGRWSDASRL 310
Query: 131 HAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRER----DVIVWNLMIQGYC- 185
+ + + +++ + ++ A K+++EM +R ++ ++ +I G+C
Sbjct: 311 LSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCM 370
Query: 186 --KVGELETGLEL-FRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDAT 242
++GE + LEL R+ +VV++N +I+ K K+ ++ + LFREM ++G + T
Sbjct: 371 LDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVT 430
Query: 243 LVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEM 302
T+ IH + + C N Q VF +M
Sbjct: 431 YTTL---------------IHGFFQAR------------------DCDNAQM---VFKQM 454
Query: 303 PM----RNVVSWNAMISGMAYNGMGEVGVGLFEDMVRG-VTPNDSTFVGVLACCAHAGLV 357
N++++N ++ G+ NG + +FE + R + P+ T+ ++ AG
Sbjct: 455 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKW 514
Query: 358 DRGRELFDSMAVK 370
G F + A+K
Sbjct: 515 KMGGIYFVASALK 527
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 161/395 (40%), Gaps = 35/395 (8%)
Query: 28 IHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHSPNPNIILFNSIIKACSLSPP 87
IH+ L H + F +V L +P + + P+ +F +II+ +
Sbjct: 73 IHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGL-----PPDDAIFVTIIRGFGRARL 127
Query: 88 FQQCFHLFSLMRNARAISPDYFTFPSLLKAASN-----LRDF----QLGQSLHAQVTTLG 138
++ + L+ + I P F S+L R+F + +H V T G
Sbjct: 128 IKRVISVVDLV-SKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYG 186
Query: 139 FARHGPVRVGVVELYANCERMGDAGKVFDEMRERDV----IVWNLMIQGYCKVGELETGL 194
G + R+GD K+ M+ V +V+N ++ CK G++
Sbjct: 187 ILMKG---------LSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRAR 237
Query: 195 ELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLG 254
L M + + V++N++IS +K +++VL + GF PD T+ V+ V G
Sbjct: 238 SLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEG 297
Query: 255 AADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR----NVVSW 310
+ KG D+V+ N+LV YC G + F EM + NV ++
Sbjct: 298 RVSEALEVLERVESKGGKVDVVAC-NTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETY 356
Query: 311 NAMISGMAYNGMGEVGVGLFEDM-VRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAV 369
N +I+G GM + + F DM + N +TF ++ + G D G ++ + M
Sbjct: 357 NLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQD 416
Query: 370 KFQLL-PKLEHYGCVVDLLGRCGHVREALDLIRSM 403
+ +++ Y CV+ + +AL+ + M
Sbjct: 417 SDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKM 451
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 136/312 (43%), Gaps = 42/312 (13%)
Query: 101 ARAISPDYFTFPSLLKAASNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMG 160
+ + PD T+ +L+ +++F++G + ++ L F+ P V L
Sbjct: 290 GKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFS---PSEAAVSSL-------- 338
Query: 161 DAGKVFDEMRERDVIVWNLMIQGYCKVGELETGLELFRRMGDRSV----VSWNLMISCLA 216
++G K G++E L L +R+ D V +N +I L
Sbjct: 339 --------------------VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLC 378
Query: 217 KGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIV 276
KG+K EA +LF M + G P+D T ++ + R G D D G L+ V
Sbjct: 379 KGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTG-LKLSV 437
Query: 277 SVGNSLVDFYCKCGNPQAGLSVFNEMPMR----NVVSWNAMISGMAYNGMGEVGVGLFED 332
NSL++ +CK G+ A EM + VV++ +++ G G + L+ +
Sbjct: 438 YPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHE 497
Query: 333 MV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCG 391
M +G+ P+ TF +L+ AGL+ +LF+ MA ++ + P Y +++ G
Sbjct: 498 MTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA-EWNVKPNRVTYNVMIEGYCEEG 556
Query: 392 HVREALDLIRSM 403
+ +A + ++ M
Sbjct: 557 DMSKAFEFLKEM 568
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 136/344 (39%), Gaps = 51/344 (14%)
Query: 59 YATRVFNHSPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAA 118
+ + N P ++ + S++ + L+ M + I+P +TF +LL
Sbjct: 459 FMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEM-TGKGIAPSIYTFTTLLS-- 515
Query: 119 SNLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDV---- 174
G R G +R DA K+F+EM E +V
Sbjct: 516 -------------------GLFRAGLIR--------------DAVKLFNEMAEWNVKPNR 542
Query: 175 IVWNLMIQGYCKVGELETGLELFRRMGDRSVV----SWNLMISCLAKGKKEEEALVLFRE 230
+ +N+MI+GYC+ G++ E + M ++ +V S+ +I L + EA V
Sbjct: 543 VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDG 602
Query: 231 MLEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCG 290
+ + E ++ +L R G + + +G D+V G L+D K
Sbjct: 603 LHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYG-VLIDGSLKHK 661
Query: 291 NPQAGLSVFNEMPMRNV----VSWNAMISGMAYNGMGEVGVGLFEDMV-RGVTPNDSTFV 345
+ + + EM R + V + +MI + G + G+++ M+ G PN+ T+
Sbjct: 662 DRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYT 721
Query: 346 GVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGR 389
V+ AG V+ L M +P YGC +D+L +
Sbjct: 722 AVINGLCKAGFVNEAEVLCSKMQ-PVSSVPNQVTYGCFLDILTK 764
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 131/332 (39%), Gaps = 68/332 (20%)
Query: 129 SLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRE----RDVIVWNLMIQGY 184
SL +V TL HG V+ G A ++F++M DV ++ +I+
Sbjct: 187 SLLPEVRTLSALLHGLVKF---------RHFGLAMELFNDMVSVGIRPDVYIYTGVIRSL 237
Query: 185 CKVGELETGLELFRRMG----DRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDD 240
C++ +L E+ M D ++V +N++I L K +K EA+ + +++ K +PD
Sbjct: 238 CELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDV 297
Query: 241 ATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFN 300
T T LV CK + GL + +
Sbjct: 298 VTYCT------------------------------------LVYGLCKVQEFEIGLEMMD 321
Query: 301 EM------PMRNVVSWNAMISGMAYNGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAH 353
EM P VS +++ G+ G E + L + +V GV+PN + ++
Sbjct: 322 EMLCLRFSPSEAAVS--SLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCK 379
Query: 354 AGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIRSM---PMEPTAA 410
LFD M K L P Y ++D+ R G + AL + M ++ +
Sbjct: 380 GRKFHEAELLFDRMG-KIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVY 438
Query: 411 LWGALLSACRTHGDREIAEIAAKELVN--VEP 440
+ +L++ GD AE E++N +EP
Sbjct: 439 PYNSLINGHCKFGDISAAEGFMAEMINKKLEP 470
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 103/479 (21%), Positives = 196/479 (40%), Gaps = 59/479 (12%)
Query: 8 IERRILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASLHRVPYATRVFNHS 67
+ R L L G T L++ + H HH + L + + +
Sbjct: 17 VRRHYLLLERGNNPETSLSRSFSGASHH--HHYRERLRNELHCIKFDDAFSLFCEMLQSR 74
Query: 68 PNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLG 127
P P+I+ F ++ + F +L+ M N IS D ++F L+ L
Sbjct: 75 PIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENL-GISHDLYSFTILIHCFCRCSRLSLA 133
Query: 128 QSLHAQVTTLGFARHGPVRVG-VVELYANCERMGDAGKVFDEMRE----RDVIVWNLMIQ 182
+L ++ LGF R V +G ++ + R +A + D M +V+++N +I
Sbjct: 134 LALLGKMMKLGF-RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVIN 192
Query: 183 GYCKVGELETGLELFRRMGDRSV----VSWNLMISCLAKGKKEE---------------- 222
G CK +L LE+F M + + V++N +IS L+ +
Sbjct: 193 GLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDP 252
Query: 223 -------------------EALVLFREMLEKGFEPDDATLVTVLPVCARLGAADVGEWIH 263
EA L++EM+ + P+ T +++ G +++
Sbjct: 253 NVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMF 312
Query: 264 SYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVV----SWNAMISGMAY 319
KG D+V+ N+L+ +CK + G+ +F EM + +V ++N +I G
Sbjct: 313 DLMVSKGCFPDVVTY-NTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQ 371
Query: 320 NGMGEVGVGLFEDMVR-GVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLE 378
G V +F MV GV+P+ T+ +L C + G +++ + + + K ++ +
Sbjct: 372 AGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ-KSEMDVDII 430
Query: 379 HYGCVVDLLGRCGHVREALDLIRSMP---MEPTAALWGALLSA-CRTHGDREIAEIAAK 433
Y ++ L R ++EA L RS+ ++P A + ++S CR RE ++ +
Sbjct: 431 TYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRR 489
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 100/225 (44%), Gaps = 9/225 (4%)
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLGQS 129
PN+ +NS+I + ++F LM ++ PD T+ +L+ + + G
Sbjct: 287 PNVFTYNSLINGFCIHGCLGDAKYMFDLMV-SKGCFPDVVTYNTLITGFCKSKRVEDGMK 345
Query: 130 LHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRE----RDVIVWNLMIQGYC 185
L ++T G ++ Y ++ A KVF+ M + D++ +N+++ C
Sbjct: 346 LFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLC 405
Query: 186 KVGELETGL----ELFRRMGDRSVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPDDA 241
G++E L +L + D ++++N++I L + K +EA LFR + KG +PD
Sbjct: 406 NNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAI 465
Query: 242 TLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFY 286
+T++ R G + + + GF+ +L D Y
Sbjct: 466 AYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHY 510
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 123/278 (44%), Gaps = 14/278 (5%)
Query: 68 PNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQLG 127
P P+I+ F ++ A + ++ + FS IS D ++F L+
Sbjct: 67 PLPSIVDFTRLLTATANLRRYETVIY-FSQKMELYGISHDLYSFTILIHCFCRCSRLSFA 125
Query: 128 QSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEM----RERDVIVWNLMIQG 183
S+ ++ LG+ ++ + R+GDA + M E +V+V+N +I G
Sbjct: 126 LSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDG 185
Query: 184 YCKVGELETGLELFRRMGDR----SVVSWNLMISCLAKGKKEEEALVLFREMLEKGFEPD 239
CK GEL LEL M + VV++N +++ L + +A + R+M+++ PD
Sbjct: 186 LCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPD 245
Query: 240 DATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVF 299
T ++ V + G D + ++ + V+ NS+++ C G F
Sbjct: 246 VVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY-NSIINGLCMHGRLYDAKKTF 304
Query: 300 NEMPMR----NVVSWNAMISGMAYNGMGEVGVGLFEDM 333
+ M + NVV++N +ISG M + G+ LF+ M
Sbjct: 305 DLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 125/280 (44%), Gaps = 24/280 (8%)
Query: 158 RMGDAGKVFDEMRER----DVIVWNLMIQGYCKVGELETGLELFRRMG----DRSVVSWN 209
R DA +F EM ++ + ++ + ET + ++M + S+
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 210 LMISCLAKGKKEEEALVLFREMLEKGFEPDDATLVTVLP---VCARLGAADVGEWIHSYA 266
++I C + + AL + +M++ G+EP T ++L + R+G A +
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA---FSLVILM 167
Query: 267 NDKGFLRDIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMR----NVVSWNAMISGMAYNGM 322
G+ ++V V N+L+D CK G L + NEM + +VV++N +++G+ Y+G
Sbjct: 168 VKSGYEPNVV-VYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 323 GEVGVGLFEDMV-RGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYG 381
+ DM+ R + P+ TF ++ G +D +EL+ M ++ + P Y
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM-IQSSVDPNNVTYN 285
Query: 382 CVVDLL---GRCGHVREALDLIRSMPMEPTAALWGALLSA 418
+++ L GR ++ DL+ S P + L+S
Sbjct: 286 SIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISG 325
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 150/365 (41%), Gaps = 81/365 (22%)
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLK----------AAS 119
PN++++N++I + L + M + + D T+ +LL AA
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEK-KGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 120 NLRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERDV----I 175
LRD + +S++ V T +++++ + +A +++ EM + V +
Sbjct: 233 MLRD-MMKRSINPDVVTF---------TALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV 282
Query: 176 VWNLMIQGYCKVGELETGLELFRRMGDR----SVVSWNLMISCLAKGKKEEEALVLFREM 231
+N +I G C G L + F M + +VV++N +IS K + +E + LF+ M
Sbjct: 283 TYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342
Query: 232 LEKGFEPDDATLVTVLPVCARLGAADVGEWIHSYANDKGFLRDIVSVGNSLVDFYCKCGN 291
+GF D I +Y N+L+ YC+ G
Sbjct: 343 SCEGFNAD----------------------IFTY--------------NTLIHGYCQVGK 366
Query: 292 PQAGLSVFNEMPMR----NVVSWNAMISGMAYNGMGEVGVGLFEDMVRGVTPNDSTFVGV 347
+ L +F M R ++++ ++ G+ NG E + F+DM ++G+
Sbjct: 367 LRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDM-----RESEKYIGI 421
Query: 348 LAC------CAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGRCGHVREALDLIR 401
+A A V++ ELF + V+ + P Y ++ L + G REA +LIR
Sbjct: 422 VAYNIMIHGLCKADKVEKAWELFCRLPVE-GVKPDARTYTIMILGLCKNGPRREADELIR 480
Query: 402 SMPME 406
M E
Sbjct: 481 RMKEE 485
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 10/193 (5%)
Query: 67 SPNPNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSLLKAASNLRDFQL 126
S +PN + +NSII + F LM ++ P+ T+ +L+ R
Sbjct: 276 SVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA-SKGCFPNVVTYNTLISGFCKFRMVDE 334
Query: 127 GQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRER----DVIVWNLMIQ 182
G L +++ GF ++ Y ++ A +F M R D+I +++
Sbjct: 335 GMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLH 394
Query: 183 GYCKVGELETGLELFRRMGDRS----VVSWNLMISCLAKGKKEEEALVLFREMLEKGFEP 238
G C GE+E+ L F M + +V++N+MI L K K E+A LF + +G +P
Sbjct: 395 GLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKP 454
Query: 239 DDATL-VTVLPVC 250
D T + +L +C
Sbjct: 455 DARTYTIMILGLC 467
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 27/183 (14%)
Query: 70 PNIILFNSIIKACSLSPPFQQCFHLFSLMRNARAISPDYFTFPSL---------LKAASN 120
PN++ +N++I + LF M + + D FT+ +L L+ A +
Sbjct: 314 PNVVTYNTLISGFCKFRMVDEGMKLFQRM-SCEGFNADIFTYNTLIHGYCQVGKLRVALD 372
Query: 121 LRDFQLGQSLHAQVTTLGFARHGPVRVGVVELYANCERMGDAGKVFDEMRERD----VIV 176
+ + + + + + T HG G +E A FD+MRE + ++
Sbjct: 373 IFCWMVSRRVTPDIITHCILLHGLCVNGEIE---------SALVKFDDMRESEKYIGIVA 423
Query: 177 WNLMIQGYCKVGELETGLELFRRMGDRSVV----SWNLMISCLAKGKKEEEALVLFREML 232
+N+MI G CK ++E ELF R+ V ++ +MI L K EA L R M
Sbjct: 424 YNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMK 483
Query: 233 EKG 235
E+G
Sbjct: 484 EEG 486
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 116/516 (22%), Positives = 209/516 (40%), Gaps = 60/516 (11%)
Query: 11 RILSLLHGAKTRTQLTQIHAHFLRHGLHHSNQILAHFISVCASL--HRVPYATRVFNHSP 68
++L L AK +++ F+R+G H + H IS+C ++ + + V ++
Sbjct: 106 KLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYAN 165
Query: 69 NPNIIL----------FNSIIKACSLSPPFQQCFHLFSLMRNA-----------RAISPD 107
N L + + A S P L R+A R I P+
Sbjct: 166 NSRFELGFEAFKRSGYYGYKLSALSCKPLM---IALLKENRSADVEYVYKEMIRRKIQPN 222
Query: 108 YFTFPSLLKAASNLRDFQLGQSLHAQVTTLG----FARHGPVRVGVVELYANCERMGDAG 163
FTF ++ A + + + G + + G +L N +M A
Sbjct: 223 VFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGN-GKMYKAD 281
Query: 164 KVFDEMRERDV----IVWNLMIQGYCKVGELETGLELFRRMGDR----SVVSWNLMISCL 215
V EM E DV +N++I G+ K L +++F+ M D+ +V+S+N +I+ L
Sbjct: 282 AVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGL 341
Query: 216 AKGKKEEEALVLFREMLEKGFEPDDATLVTVLPVCARLGAAD-VGEWIHSYANDKGF-LR 273
G K EA+ + +M+ G +P+ L+T + D + E + + + KG
Sbjct: 342 CNGGKISEAISMRDKMVSAGVQPN---LITYNALINGFCKNDMLKEALDMFGSVKGQGAV 398
Query: 274 DIVSVGNSLVDFYCKCGNPQAGLSVFNEMPMRNVV----SWNAMISGMAYNGMGEVGVGL 329
+ N L+D YCK G G ++ EM +V ++N +I+G+ NG E L
Sbjct: 399 PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKL 458
Query: 330 FEDMVRGVTPNDSTFVGVLACCAHAGLVDRGRELFDSMAVKFQLLPKLEHYGCVVDLLGR 389
F+ + P+ TF ++ G + L M+ K L P+ Y V+ +
Sbjct: 459 FDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMS-KMGLKPRHLTYNIVMKGYCK 517
Query: 390 CGHVREALDLIRSMPMEP----TAALWGALLSACRTHGDREIAEIAAKELVNVEPWNSGH 445
G+++ A ++ M E A + LL G E A + E++
Sbjct: 518 EGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLE-------K 570
Query: 446 HVLLSNIYAEEMRWDEVEKVRVLMREGHIKKVPGQS 481
++ + I E ++ + V++ V EGH+ V +S
Sbjct: 571 GLVPNRITYEIVKEEMVDQGFVPDIEGHLFNVSTKS 606