Miyakogusa Predicted Gene
- Lj5g3v1513570.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1513570.1 Non Chatacterized Hit- tr|K3X8E8|K3X8E8_PYTUL
Uncharacterized protein OS=Pythium ultimum
GN=PYU1_G01,37.04,5e-19,Syntaxin,Syntaxin, N-terminal;
coiled-coil,NULL; Syntaxin N-terminal domain,Syntaxin, N-terminal;
se,gene.g61835.t1.1
(237 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G05710.2 | Symbols: SYP43, ATSYP43 | syntaxin of plants 43 | ... 338 1e-93
AT5G26980.2 | Symbols: SYP41, ATSYP41, ATTLG2A | syntaxin of pla... 338 2e-93
AT5G26980.1 | Symbols: SYP41, ATSYP41, ATTLG2A | syntaxin of pla... 338 2e-93
AT3G05710.1 | Symbols: SYP43, ATSYP43 | syntaxin of plants 43 | ... 333 8e-92
AT4G02195.1 | Symbols: SYP42, TLG2B, ATSYP42, ATTLG2B | syntaxin... 280 7e-76
>AT3G05710.2 | Symbols: SYP43, ATSYP43 | syntaxin of plants 43 |
chr3:1685262-1687229 FORWARD LENGTH=331
Length = 331
Score = 338 bits (868), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 180/273 (65%), Positives = 201/273 (73%), Gaps = 42/273 (15%)
Query: 1 MATRNRTLLFRKHRDALKSVRFXXXXXXXXXXX------------GPVIELVSTSLLNPN 48
MATRNRTLLFRK+R++L+SVR GPVIE+ STSLLNPN
Sbjct: 1 MATRNRTLLFRKYRNSLRSVRAPMGSSSSSTLTEHNSLTGAKSGLGPVIEMASTSLLNPN 60
Query: 49 RSYTPLSTEDPANSSKGAIPITVGLPPAWVDVSEEISANVQRARSKMAELAKAHAKALMP 108
RSY P+STEDP NSS+G I TVGLPP WVDVSEEIS +QRAR+KMAEL KAHAKALMP
Sbjct: 61 RSYAPVSTEDPGNSSRGTI--TVGLPPDWVDVSEEISVYIQRARTKMAELGKAHAKALMP 118
Query: 109 SFGDGKEDQHAIESLTYEITDLIKRSEKKLRRLSAAGPSEDSNVRKNVQRSLATDLQNLS 168
SFGDGKEDQH IE+LT E+T L+K+SEK+L+RLSAAGPSEDSNVRKNVQRSLATDLQNLS
Sbjct: 119 SFGDGKEDQHQIETLTQEVTFLLKKSEKQLQRLSAAGPSEDSNVRKNVQRSLATDLQNLS 178
Query: 169 VELRKKQSTYLKRLRQQKEGQDGVDLEINLNGGKSRYEDDDLDNM--------------- 213
+ELRKKQSTYLKRLR QKE DG DLE+NLNG + + EDDD D+M
Sbjct: 179 MELRKKQSTYLKRLRLQKE--DGADLEMNLNGSRYKAEDDDFDDMVFSEHQMSKIKKSEE 236
Query: 214 -----------VVESVNELAQIMKDLSVLVIDQ 235
VVESV+ELAQIMKDLS LVIDQ
Sbjct: 237 ISIEREKEIQQVVESVSELAQIMKDLSALVIDQ 269
>AT5G26980.2 | Symbols: SYP41, ATSYP41, ATTLG2A | syntaxin of plants
41 | chr5:9488724-9490604 REVERSE LENGTH=322
Length = 322
Score = 338 bits (867), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 181/264 (68%), Positives = 202/264 (76%), Gaps = 33/264 (12%)
Query: 1 MATRNRTLLFRKHRDALKSVRFXXXXXXXXXX----XGPVIELVSTSLLNPNRSYTPLST 56
MATRNRTLLFRK+R++L+SVR GPVIE+ STSLLNPNRSY P+ST
Sbjct: 1 MATRNRTLLFRKYRNSLRSVRAPLSSSSLTGTRSGGVGPVIEMASTSLLNPNRSYAPIST 60
Query: 57 EDPANSSKGAIPITVGLPPAWVDVSEEISANVQRARSKMAELAKAHAKALMPSFGDGKED 116
EDP SSKGAI TVGLPPAWVDVSEEIS N+QRAR+KMAEL KAHAKALMPSFGDGKED
Sbjct: 61 EDPGTSSKGAI--TVGLPPAWVDVSEEISVNIQRARTKMAELGKAHAKALMPSFGDGKED 118
Query: 117 QHAIESLTYEITDLIKRSEKKLRRLSAAGPSEDSNVRKNVQRSLATDLQNLSVELRKKQS 176
QH IESLT EIT L+K+SEK+L+RLSA+GPSEDSNVRKNVQRSLATDLQ LS+ELRKKQS
Sbjct: 119 QHNIESLTQEITFLLKKSEKQLQRLSASGPSEDSNVRKNVQRSLATDLQLLSMELRKKQS 178
Query: 177 TYLKRLRQQKEGQDGVDLEINLNGGKSRYEDDDLDNM----------------------- 213
TYLKRLRQQKE DG+DLE+NL+ + R E+DD +M
Sbjct: 179 TYLKRLRQQKE--DGMDLEMNLSRNRYRPEEDDFGDMLNEHQMSKIKKSEEVSVEREKEI 236
Query: 214 --VVESVNELAQIMKDLSVLVIDQ 235
VVESVN+LAQIMKDLS LVIDQ
Sbjct: 237 QQVVESVNDLAQIMKDLSALVIDQ 260
>AT5G26980.1 | Symbols: SYP41, ATSYP41, ATTLG2A | syntaxin of plants
41 | chr5:9488724-9490604 REVERSE LENGTH=322
Length = 322
Score = 338 bits (867), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 181/264 (68%), Positives = 202/264 (76%), Gaps = 33/264 (12%)
Query: 1 MATRNRTLLFRKHRDALKSVRFXXXXXXXXXX----XGPVIELVSTSLLNPNRSYTPLST 56
MATRNRTLLFRK+R++L+SVR GPVIE+ STSLLNPNRSY P+ST
Sbjct: 1 MATRNRTLLFRKYRNSLRSVRAPLSSSSLTGTRSGGVGPVIEMASTSLLNPNRSYAPIST 60
Query: 57 EDPANSSKGAIPITVGLPPAWVDVSEEISANVQRARSKMAELAKAHAKALMPSFGDGKED 116
EDP SSKGAI TVGLPPAWVDVSEEIS N+QRAR+KMAEL KAHAKALMPSFGDGKED
Sbjct: 61 EDPGTSSKGAI--TVGLPPAWVDVSEEISVNIQRARTKMAELGKAHAKALMPSFGDGKED 118
Query: 117 QHAIESLTYEITDLIKRSEKKLRRLSAAGPSEDSNVRKNVQRSLATDLQNLSVELRKKQS 176
QH IESLT EIT L+K+SEK+L+RLSA+GPSEDSNVRKNVQRSLATDLQ LS+ELRKKQS
Sbjct: 119 QHNIESLTQEITFLLKKSEKQLQRLSASGPSEDSNVRKNVQRSLATDLQLLSMELRKKQS 178
Query: 177 TYLKRLRQQKEGQDGVDLEINLNGGKSRYEDDDLDNM----------------------- 213
TYLKRLRQQKE DG+DLE+NL+ + R E+DD +M
Sbjct: 179 TYLKRLRQQKE--DGMDLEMNLSRNRYRPEEDDFGDMLNEHQMSKIKKSEEVSVEREKEI 236
Query: 214 --VVESVNELAQIMKDLSVLVIDQ 235
VVESVN+LAQIMKDLS LVIDQ
Sbjct: 237 QQVVESVNDLAQIMKDLSALVIDQ 260
>AT3G05710.1 | Symbols: SYP43, ATSYP43 | syntaxin of plants 43 |
chr3:1685262-1687229 FORWARD LENGTH=330
Length = 330
Score = 333 bits (853), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 179/273 (65%), Positives = 200/273 (73%), Gaps = 43/273 (15%)
Query: 1 MATRNRTLLFRKHRDALKSVRFXXXXXXXXXXX------------GPVIELVSTSLLNPN 48
MATRNRTLLFRK+R++L+SVR GPVIE+ STSLLNPN
Sbjct: 1 MATRNRTLLFRKYRNSLRSVRAPMGSSSSSTLTEHNSLTGAKSGLGPVIEMASTSLLNPN 60
Query: 49 RSYTPLSTEDPANSSKGAIPITVGLPPAWVDVSEEISANVQRARSKMAELAKAHAKALMP 108
RSY P+STEDP NS +G I TVGLPP WVDVSEEIS +QRAR+KMAEL KAHAKALMP
Sbjct: 61 RSYAPVSTEDPGNS-RGTI--TVGLPPDWVDVSEEISVYIQRARTKMAELGKAHAKALMP 117
Query: 109 SFGDGKEDQHAIESLTYEITDLIKRSEKKLRRLSAAGPSEDSNVRKNVQRSLATDLQNLS 168
SFGDGKEDQH IE+LT E+T L+K+SEK+L+RLSAAGPSEDSNVRKNVQRSLATDLQNLS
Sbjct: 118 SFGDGKEDQHQIETLTQEVTFLLKKSEKQLQRLSAAGPSEDSNVRKNVQRSLATDLQNLS 177
Query: 169 VELRKKQSTYLKRLRQQKEGQDGVDLEINLNGGKSRYEDDDLDNM--------------- 213
+ELRKKQSTYLKRLR QKE DG DLE+NLNG + + EDDD D+M
Sbjct: 178 MELRKKQSTYLKRLRLQKE--DGADLEMNLNGSRYKAEDDDFDDMVFSEHQMSKIKKSEE 235
Query: 214 -----------VVESVNELAQIMKDLSVLVIDQ 235
VVESV+ELAQIMKDLS LVIDQ
Sbjct: 236 ISIEREKEIQQVVESVSELAQIMKDLSALVIDQ 268
>AT4G02195.1 | Symbols: SYP42, TLG2B, ATSYP42, ATTLG2B | syntaxin of
plants 42 | chr4:970099-972192 REVERSE LENGTH=323
Length = 323
Score = 280 bits (716), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 152/263 (57%), Positives = 181/263 (68%), Gaps = 30/263 (11%)
Query: 1 MATRNRTLLFRKHRDALKSVRFXXXXXXXXXXXGPVIELVSTSLLNPNRS-YTPLSTEDP 59
MATRNRT ++RKHRDA KS R GPVIE+VS S N S Y PL++ DP
Sbjct: 1 MATRNRTTVYRKHRDACKSARAPLSLSASDSFGGPVIEMVSGSFSRSNHSSYAPLNSYDP 60
Query: 60 ANSSKGAIPITVGLPPAWVDVSEEISANVQRARSKMAELAKAHAKALMPSFGDGKEDQHA 119
SS A T+G+PPAWVD SEEI+ N+Q+ R KM ELAKAH+KALMP+FGD K
Sbjct: 61 GPSSSDAF--TIGMPPAWVDDSEEITFNIQKVRDKMNELAKAHSKALMPTFGDNKGIHRE 118
Query: 120 IESLTYEITDLIKRSEKKLRRLSAAGPSEDSNVRKNVQRSLATDLQNLSVELRKKQSTYL 179
+E LT+EITDL+++SEK+L+ LS GPSE+SN+RKNVQRSLATDLQNLS+ELR+KQSTYL
Sbjct: 119 VEMLTHEITDLLRKSEKRLQMLSTRGPSEESNLRKNVQRSLATDLQNLSMELRRKQSTYL 178
Query: 180 KRLRQQKEGQDGVDLEINLNGGKSRY-EDDDLDNM------------------------- 213
KRL+QQKEGQD VDLE N+NG SR E+D+L M
Sbjct: 179 KRLQQQKEGQDEVDLEFNVNGKMSRLDEEDELGGMGFDEHQTIKLKEGQHVSAEREREIQ 238
Query: 214 -VVESVNELAQIMKDLSVLVIDQ 235
V+ SVN+LAQIMKDLS LVIDQ
Sbjct: 239 QVLGSVNDLAQIMKDLSALVIDQ 261