Miyakogusa Predicted Gene

Lj5g3v1511500.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1511500.1 Non Chatacterized Hit- tr|I1NJ39|I1NJ39_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,88.24,0,PROKAR_LIPOPROTEIN,NULL; no description,WD40/YVTN
repeat-like-containing domain; SUBFAMILY NOT NAMED,TC63735.path2.1
         (136 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G27030.1 | Symbols: TPR3 | TOPLESS-related 3 | chr5:9508913-9...   166   3e-42
AT5G27030.2 | Symbols: TPR3 | TOPLESS-related 3 | chr5:9508913-9...   166   5e-42
AT3G16830.1 | Symbols: TPR2 | TOPLESS-related 2 | chr3:5731709-5...   140   3e-34
AT1G15750.4 | Symbols: WSIP1, TPL | Transducin family protein / ...   132   8e-32
AT1G15750.3 | Symbols: WSIP1, TPL | Transducin family protein / ...   132   8e-32
AT1G15750.2 | Symbols: WSIP1, TPL | Transducin family protein / ...   132   8e-32
AT1G15750.1 | Symbols: WSIP1, TPL | Transducin family protein / ...   132   8e-32
AT1G80490.1 | Symbols: TPR1 | TOPLESS-related 1 | chr1:30261094-...   124   3e-29
AT1G80490.2 | Symbols: TPR1 | TOPLESS-related 1 | chr1:30261094-...   123   3e-29
AT3G15880.3 | Symbols: WSIP2 | WUS-interacting protein 2 | chr3:...   122   6e-29
AT3G15880.2 | Symbols: WSIP2, TPR4 | WUS-interacting protein 2 |...   122   6e-29
AT3G15880.1 | Symbols: WSIP2, TPR4 | WUS-interacting protein 2 |...   122   7e-29
AT2G25420.1 | Symbols:  | transducin family protein / WD-40 repe...    75   1e-14

>AT5G27030.1 | Symbols: TPR3 | TOPLESS-related 3 |
            chr5:9508913-9515263 REVERSE LENGTH=1108
          Length = 1108

 Score =  166 bits (421), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 78/110 (70%), Positives = 88/110 (80%), Gaps = 4/110 (3%)

Query: 1    MERIRQWVPQDALSAPISCAVYSCNSQLIYATFCDANVGVFDADTLRLRCRIAPSVCLSS 60
            ME IRQW+PQD+LSAPIS AVY+CNSQLIY TF D N+GVFDAD+LRLRCRI+PS  L  
Sbjct: 983  MECIRQWIPQDSLSAPISSAVYACNSQLIYTTFRDGNIGVFDADSLRLRCRISPSAYLP- 1041

Query: 61   AALSGNQAVYPFVVATHPLEPNQFAVGLTDGSVKVIEPTESEGKWGSSPP 110
                GNQ + P VVA HP +PNQFAVGL DGSVK++EPTE EGKWG  PP
Sbjct: 1042 ---QGNQGLSPLVVAAHPQDPNQFAVGLNDGSVKMMEPTEGEGKWGMIPP 1088


>AT5G27030.2 | Symbols: TPR3 | TOPLESS-related 3 |
            chr5:9508913-9515263 REVERSE LENGTH=1134
          Length = 1134

 Score =  166 bits (420), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 78/110 (70%), Positives = 88/110 (80%), Gaps = 4/110 (3%)

Query: 1    MERIRQWVPQDALSAPISCAVYSCNSQLIYATFCDANVGVFDADTLRLRCRIAPSVCLSS 60
            ME IRQW+PQD+LSAPIS AVY+CNSQLIY TF D N+GVFDAD+LRLRCRI+PS  L  
Sbjct: 1009 MECIRQWIPQDSLSAPISSAVYACNSQLIYTTFRDGNIGVFDADSLRLRCRISPSAYLP- 1067

Query: 61   AALSGNQAVYPFVVATHPLEPNQFAVGLTDGSVKVIEPTESEGKWGSSPP 110
                GNQ + P VVA HP +PNQFAVGL DGSVK++EPTE EGKWG  PP
Sbjct: 1068 ---QGNQGLSPLVVAAHPQDPNQFAVGLNDGSVKMMEPTEGEGKWGMIPP 1114


>AT3G16830.1 | Symbols: TPR2 | TOPLESS-related 2 |
            chr3:5731709-5737531 FORWARD LENGTH=1131
          Length = 1131

 Score =  140 bits (352), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 71/139 (51%), Positives = 90/139 (64%), Gaps = 4/139 (2%)

Query: 1    MERIRQWVPQDALSAPISCAVYSCNSQLIYATFCDANVGVFDADTLRLRCRIAPSVCLSS 60
            ME I +WVPQ+ALS+PI+ A YSCNSQL+YA+F D N+ VFDA++LRLRCRIAPS  +  
Sbjct: 994  MECIHKWVPQEALSSPITSASYSCNSQLVYASFADGNIAVFDAESLRLRCRIAPSAYMPQ 1053

Query: 61   AALSGNQAVYPFVVATHPLEPNQFAVGLTDGSVKVIEPTESEGKWG---SSPPVDNGILN 117
                 +  ++P V+  HP EPNQ AVGL+DGSVKVIEP+E   +WG   ++     G  N
Sbjct: 1054 PT-PNSAPIFPQVITAHPQEPNQLAVGLSDGSVKVIEPSELSRRWGVGVAAGSDKAGTEN 1112

Query: 118  GRXXXXXXXXXXXXDQAQR 136
            GR            DQ QR
Sbjct: 1113 GRPSSSSAANNSSSDQIQR 1131


>AT1G15750.4 | Symbols: WSIP1, TPL | Transducin family protein / WD-40
            repeat family protein | chr1:5415086-5420359 REVERSE
            LENGTH=1131
          Length = 1131

 Score =  132 bits (331), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 65/118 (55%), Positives = 86/118 (72%), Gaps = 3/118 (2%)

Query: 1    MERIRQWVPQDALSAPISCAVYSCNSQLIYATFCDANVGVFDADTLRLRCRIAPSVCLSS 60
            +E ++QW  +++L API+ A +SC+SQL+YA+F DA V VF +  LRLRCR+ PS  L  
Sbjct: 1000 LECMKQWAVRESL-APITHATFSCDSQLVYASFMDATVCVFSSANLRLRCRVNPSAYLP- 1057

Query: 61   AALSGNQAVYPFVVATHPLEPNQFAVGLTDGSVKVIEPTESEGKWGSSPPVDNGILNG 118
            A+LS N  V+P V+A HP EPN FAVGL+DG V + EP ESEGKWG +PP +NG  +G
Sbjct: 1058 ASLS-NSNVHPLVIAAHPQEPNMFAVGLSDGGVHIFEPLESEGKWGVAPPAENGSASG 1114


>AT1G15750.3 | Symbols: WSIP1, TPL | Transducin family protein / WD-40
            repeat family protein | chr1:5415086-5420359 REVERSE
            LENGTH=1131
          Length = 1131

 Score =  132 bits (331), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 65/118 (55%), Positives = 86/118 (72%), Gaps = 3/118 (2%)

Query: 1    MERIRQWVPQDALSAPISCAVYSCNSQLIYATFCDANVGVFDADTLRLRCRIAPSVCLSS 60
            +E ++QW  +++L API+ A +SC+SQL+YA+F DA V VF +  LRLRCR+ PS  L  
Sbjct: 1000 LECMKQWAVRESL-APITHATFSCDSQLVYASFMDATVCVFSSANLRLRCRVNPSAYLP- 1057

Query: 61   AALSGNQAVYPFVVATHPLEPNQFAVGLTDGSVKVIEPTESEGKWGSSPPVDNGILNG 118
            A+LS N  V+P V+A HP EPN FAVGL+DG V + EP ESEGKWG +PP +NG  +G
Sbjct: 1058 ASLS-NSNVHPLVIAAHPQEPNMFAVGLSDGGVHIFEPLESEGKWGVAPPAENGSASG 1114


>AT1G15750.2 | Symbols: WSIP1, TPL | Transducin family protein / WD-40
            repeat family protein | chr1:5415086-5420359 REVERSE
            LENGTH=1131
          Length = 1131

 Score =  132 bits (331), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 65/118 (55%), Positives = 86/118 (72%), Gaps = 3/118 (2%)

Query: 1    MERIRQWVPQDALSAPISCAVYSCNSQLIYATFCDANVGVFDADTLRLRCRIAPSVCLSS 60
            +E ++QW  +++L API+ A +SC+SQL+YA+F DA V VF +  LRLRCR+ PS  L  
Sbjct: 1000 LECMKQWAVRESL-APITHATFSCDSQLVYASFMDATVCVFSSANLRLRCRVNPSAYLP- 1057

Query: 61   AALSGNQAVYPFVVATHPLEPNQFAVGLTDGSVKVIEPTESEGKWGSSPPVDNGILNG 118
            A+LS N  V+P V+A HP EPN FAVGL+DG V + EP ESEGKWG +PP +NG  +G
Sbjct: 1058 ASLS-NSNVHPLVIAAHPQEPNMFAVGLSDGGVHIFEPLESEGKWGVAPPAENGSASG 1114


>AT1G15750.1 | Symbols: WSIP1, TPL | Transducin family protein / WD-40
            repeat family protein | chr1:5415086-5420359 REVERSE
            LENGTH=1131
          Length = 1131

 Score =  132 bits (331), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 65/118 (55%), Positives = 86/118 (72%), Gaps = 3/118 (2%)

Query: 1    MERIRQWVPQDALSAPISCAVYSCNSQLIYATFCDANVGVFDADTLRLRCRIAPSVCLSS 60
            +E ++QW  +++L API+ A +SC+SQL+YA+F DA V VF +  LRLRCR+ PS  L  
Sbjct: 1000 LECMKQWAVRESL-APITHATFSCDSQLVYASFMDATVCVFSSANLRLRCRVNPSAYLP- 1057

Query: 61   AALSGNQAVYPFVVATHPLEPNQFAVGLTDGSVKVIEPTESEGKWGSSPPVDNGILNG 118
            A+LS N  V+P V+A HP EPN FAVGL+DG V + EP ESEGKWG +PP +NG  +G
Sbjct: 1058 ASLS-NSNVHPLVIAAHPQEPNMFAVGLSDGGVHIFEPLESEGKWGVAPPAENGSASG 1114


>AT1G80490.1 | Symbols: TPR1 | TOPLESS-related 1 |
            chr1:30261094-30266446 REVERSE LENGTH=1119
          Length = 1119

 Score =  124 bits (310), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 62/114 (54%), Positives = 80/114 (70%), Gaps = 3/114 (2%)

Query: 1    MERIRQWVPQDALSAPISCAVYSCNSQLIYATFCDANVGVFDADTLRLRCRIAPSVCLSS 60
            +E ++QW P    +API+ A +SC+SQLIY +F DA + VF +  LRLRCR+ PS  L  
Sbjct: 988  LECMKQW-PVRESAAPITHATFSCDSQLIYTSFMDATICVFSSANLRLRCRVNPSAYLP- 1045

Query: 61   AALSGNQAVYPFVVATHPLEPNQFAVGLTDGSVKVIEPTESEGKWGSSPPVDNG 114
            A+LS N  V+P V+A HP E N FAVGL+DG V + EP ESEGKWG +PP +NG
Sbjct: 1046 ASLS-NSNVHPLVIAAHPQESNMFAVGLSDGGVHIFEPLESEGKWGVAPPPENG 1098


>AT1G80490.2 | Symbols: TPR1 | TOPLESS-related 1 |
            chr1:30261094-30266446 REVERSE LENGTH=1120
          Length = 1120

 Score =  123 bits (309), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 62/114 (54%), Positives = 80/114 (70%), Gaps = 3/114 (2%)

Query: 1    MERIRQWVPQDALSAPISCAVYSCNSQLIYATFCDANVGVFDADTLRLRCRIAPSVCLSS 60
            +E ++QW P    +API+ A +SC+SQLIY +F DA + VF +  LRLRCR+ PS  L  
Sbjct: 989  LECMKQW-PVRESAAPITHATFSCDSQLIYTSFMDATICVFSSANLRLRCRVNPSAYLP- 1046

Query: 61   AALSGNQAVYPFVVATHPLEPNQFAVGLTDGSVKVIEPTESEGKWGSSPPVDNG 114
            A+LS N  V+P V+A HP E N FAVGL+DG V + EP ESEGKWG +PP +NG
Sbjct: 1047 ASLS-NSNVHPLVIAAHPQESNMFAVGLSDGGVHIFEPLESEGKWGVAPPPENG 1099


>AT3G15880.3 | Symbols: WSIP2 | WUS-interacting protein 2 |
            chr3:5364792-5371869 REVERSE LENGTH=1125
          Length = 1125

 Score =  122 bits (306), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 62/114 (54%), Positives = 78/114 (68%), Gaps = 4/114 (3%)

Query: 1    MERIRQWVPQDALSAPISCAVYSCNSQLIYATFCDANVGVFDADTLRLRCRIAPSVCLSS 60
            +E ++QW+P+++ S  ++ AVYSC+SQ IYA F D +V +  A TL+L+CRI P+  L S
Sbjct: 1000 LENMKQWIPKES-SGSVTDAVYSCDSQSIYAAFDDGSVSILTATTLQLKCRIGPNSYLPS 1058

Query: 61   AALSGNQAVYPFVVATHPLEPNQFAVGLTDGSVKVIEPTESEGKWGSSPPVDNG 114
               S    VYP  VA HP EPNQFAVGLTDG V VIEP   EGKWG S P +NG
Sbjct: 1059 NPSS---RVYPATVAAHPSEPNQFAVGLTDGGVHVIEPPGPEGKWGISAPPENG 1109


>AT3G15880.2 | Symbols: WSIP2, TPR4 | WUS-interacting protein 2 |
            chr3:5364454-5371869 REVERSE LENGTH=1137
          Length = 1137

 Score =  122 bits (306), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 62/114 (54%), Positives = 78/114 (68%), Gaps = 4/114 (3%)

Query: 1    MERIRQWVPQDALSAPISCAVYSCNSQLIYATFCDANVGVFDADTLRLRCRIAPSVCLSS 60
            +E ++QW+P+++ S  ++ AVYSC+SQ IYA F D +V +  A TL+L+CRI P+  L S
Sbjct: 1010 LENMKQWIPKES-SGSVTDAVYSCDSQSIYAAFDDGSVSILTATTLQLKCRIGPNSYLPS 1068

Query: 61   AALSGNQAVYPFVVATHPLEPNQFAVGLTDGSVKVIEPTESEGKWGSSPPVDNG 114
               S    VYP  VA HP EPNQFAVGLTDG V VIEP   EGKWG S P +NG
Sbjct: 1069 NPSS---RVYPATVAAHPSEPNQFAVGLTDGGVHVIEPPGPEGKWGISAPPENG 1119


>AT3G15880.1 | Symbols: WSIP2, TPR4 | WUS-interacting protein 2 |
            chr3:5364792-5371869 REVERSE LENGTH=1135
          Length = 1135

 Score =  122 bits (306), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 62/114 (54%), Positives = 78/114 (68%), Gaps = 4/114 (3%)

Query: 1    MERIRQWVPQDALSAPISCAVYSCNSQLIYATFCDANVGVFDADTLRLRCRIAPSVCLSS 60
            +E ++QW+P+++ S  ++ AVYSC+SQ IYA F D +V +  A TL+L+CRI P+  L S
Sbjct: 1010 LENMKQWIPKES-SGSVTDAVYSCDSQSIYAAFDDGSVSILTATTLQLKCRIGPNSYLPS 1068

Query: 61   AALSGNQAVYPFVVATHPLEPNQFAVGLTDGSVKVIEPTESEGKWGSSPPVDNG 114
               S    VYP  VA HP EPNQFAVGLTDG V VIEP   EGKWG S P +NG
Sbjct: 1069 NPSS---RVYPATVAAHPSEPNQFAVGLTDGGVHVIEPPGPEGKWGISAPPENG 1119


>AT2G25420.1 | Symbols:  | transducin family protein / WD-40 repeat
           family protein | chr2:10817017-10820919 FORWARD
           LENGTH=740
          Length = 740

 Score = 75.5 bits (184), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/110 (37%), Positives = 62/110 (56%), Gaps = 3/110 (2%)

Query: 6   QWVPQDALSAPISCAVYSCNSQLIYATFCDANVGVFDADTLRLRCRIAPSVCLSSAALSG 65
           QW+P DA    I+ A YS + ++IY  F   ++ + D+ T    C+I  +     +  + 
Sbjct: 623 QWIP-DASDPAITSATYSSDGEIIYVGFRCGSIKIVDSKTFMTLCQINLTSFTQLSTSNI 681

Query: 66  NQAVYPFVVATHPLEPNQFAVGLTDGSVKVIEPTESEGKWGSSPPV-DNG 114
           +  VYP VVA HP  PNQ + GL++G V V++P  S G WG + P+ DNG
Sbjct: 682 SLEVYPTVVAAHPSHPNQISAGLSNGKVIVLQPLWS-GGWGEAAPLEDNG 730