Miyakogusa Predicted Gene

Lj5g3v1498070.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1498070.1 Non Chatacterized Hit- tr|I3T846|I3T846_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,60S
RIBOSOMAL PROTEIN L22,Ribosomal protein L22e; seg,NULL;
Ribosomal_L22e,Ribosomal protein L22e,CUFF.55342.1
         (124 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G05560.3 | Symbols:  | Ribosomal L22e protein family | chr3:1...   171   1e-43
AT3G05560.2 | Symbols:  | Ribosomal L22e protein family | chr3:1...   171   1e-43
AT3G05560.1 | Symbols:  | Ribosomal L22e protein family | chr3:1...   171   1e-43
AT5G27770.1 | Symbols:  | Ribosomal L22e protein family | chr5:9...   146   3e-36
AT1G02830.1 | Symbols:  | Ribosomal L22e protein family | chr1:6...   122   4e-29

>AT3G05560.3 | Symbols:  | Ribosomal L22e protein family |
           chr3:1614641-1615204 FORWARD LENGTH=124
          Length = 124

 Score =  171 bits (432), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 84/124 (67%), Positives = 93/124 (75%)

Query: 1   MSRXXXXXXXXXXXXXXFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDAVTVA 60
           MSR              FTIDC+KPV+DKIM+IASLEKFLQERIKVGGKAGALGD+VT+ 
Sbjct: 1   MSRGGAAVAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTIT 60

Query: 61  REKSKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEG 120
           REKSKITVT+D  FS              HNVRDWLRVIA+NKDR++YELRYFNIAENEG
Sbjct: 61  REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEG 120

Query: 121 EEED 124
           EEED
Sbjct: 121 EEED 124


>AT3G05560.2 | Symbols:  | Ribosomal L22e protein family |
           chr3:1614641-1615204 FORWARD LENGTH=124
          Length = 124

 Score =  171 bits (432), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 84/124 (67%), Positives = 93/124 (75%)

Query: 1   MSRXXXXXXXXXXXXXXFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDAVTVA 60
           MSR              FTIDC+KPV+DKIM+IASLEKFLQERIKVGGKAGALGD+VT+ 
Sbjct: 1   MSRGGAAVAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTIT 60

Query: 61  REKSKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEG 120
           REKSKITVT+D  FS              HNVRDWLRVIA+NKDR++YELRYFNIAENEG
Sbjct: 61  REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEG 120

Query: 121 EEED 124
           EEED
Sbjct: 121 EEED 124


>AT3G05560.1 | Symbols:  | Ribosomal L22e protein family |
           chr3:1614641-1615204 FORWARD LENGTH=124
          Length = 124

 Score =  171 bits (432), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 84/124 (67%), Positives = 93/124 (75%)

Query: 1   MSRXXXXXXXXXXXXXXFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDAVTVA 60
           MSR              FTIDC+KPV+DKIM+IASLEKFLQERIKVGGKAGALGD+VT+ 
Sbjct: 1   MSRGGAAVAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTIT 60

Query: 61  REKSKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEG 120
           REKSKITVT+D  FS              HNVRDWLRVIA+NKDR++YELRYFNIAENEG
Sbjct: 61  REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEG 120

Query: 121 EEED 124
           EEED
Sbjct: 121 EEED 124


>AT5G27770.1 | Symbols:  | Ribosomal L22e protein family |
           chr5:9836166-9837113 FORWARD LENGTH=124
          Length = 124

 Score =  146 bits (368), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 72/113 (63%), Positives = 82/113 (72%)

Query: 1   MSRXXXXXXXXXXXXXXFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDAVTVA 60
           MSR              FTIDC+KPV+DKIM+IASLEKFLQERIKVGGKAGALGD+V++ 
Sbjct: 1   MSRGNAAAAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVSIT 60

Query: 61  REKSKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYF 113
           REKSKITVT+D  FS              HNVRDWLRVIA+NKDR++YELRYF
Sbjct: 61  REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYF 113


>AT1G02830.1 | Symbols:  | Ribosomal L22e protein family |
           chr1:625145-625608 REVERSE LENGTH=127
          Length = 127

 Score =  122 bits (307), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 58/98 (59%), Positives = 74/98 (75%)

Query: 18  FTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDAVTVAREKSKITVTSDSNFSXX 77
           F IDC+KPV+D I++IA+LEKFLQERIKV GKAGALG++V++ R   KI V ++SNFS  
Sbjct: 20  FVIDCSKPVDDTILEIATLEKFLQERIKVRGKAGALGNSVSITRYNGKINVNANSNFSKR 79

Query: 78  XXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNI 115
                       +N+RDWLRVIASNKD++VYE+RYF I
Sbjct: 80  YLKYLTKKYLKKYNLRDWLRVIASNKDKNVYEVRYFRI 117