Miyakogusa Predicted Gene

Lj5g3v1497870.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1497870.1 tr|C1EGU6|C1EGU6_MICSR Predicted protein
(Fragment) OS=Micromonas sp. (strain RCC299 / NOUM17)
GN=MI,61.04,2e-19,NuA4,Histone H4 acetyltransferase, NuA4 complex,
Eaf6; coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; U,CUFF.55330.1
         (156 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G14385.1 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   174   2e-44
AT4G14385.2 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   157   2e-39
AT4G14385.3 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   120   5e-28

>AT4G14385.1 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED
           DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
           Histone H4 acetyltransferase, NuA4 complex, Eaf6
           (InterPro:IPR015418); Has 30201 Blast hits to 17322
           proteins in 780 species: Archae - 12; Bacteria - 1396;
           Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses -
           0; Other Eukaryotes - 2996 (source: NCBI BLink). |
           chr4:8287144-8288622 REVERSE LENGTH=163
          Length = 163

 Score =  174 bits (442), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 98/144 (68%), Positives = 116/144 (80%), Gaps = 6/144 (4%)

Query: 3   SEGQKGTLNPSAMLATLLSKRHKLHEELRNIEKQVYDMETSYLQDPGQCGNVLKGFEGFL 62
           S GQK + +P AML +LL+KR KL +ELR+IEKQVY++ETSYLQ+    GN LKGFEGFL
Sbjct: 2   SLGQKSSTDPGAMLTSLLNKREKLRQELRSIEKQVYELETSYLQESSHIGNALKGFEGFL 61

Query: 63  SSSKNTALLKRSRKFQPEDRLFSLSSVTSPAAEELAAGRDDGRSDFGPGRSKGGGIYANG 122
           SSSK+TA  KRSRKFQPEDR+FSLSSVTSPAAEEL  GR+DGR++ GPGRSKGG    + 
Sbjct: 62  SSSKSTASAKRSRKFQPEDRVFSLSSVTSPAAEELGVGREDGRAELGPGRSKGG---LST 118

Query: 123 QGKPKKGRG---APRDAKRARASS 143
           QGKPKKGRG     R+AKR+R S+
Sbjct: 119 QGKPKKGRGQSIIAREAKRSRPST 142


>AT4G14385.2 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED
           DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
           Histone H4 acetyltransferase, NuA4 complex, Eaf6
           (InterPro:IPR015418); Has 35333 Blast hits to 34131
           proteins in 2444 species: Archae - 798; Bacteria -
           22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
           - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
           chr4:8287196-8288622 REVERSE LENGTH=156
          Length = 156

 Score =  157 bits (398), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 83/114 (72%), Positives = 97/114 (85%)

Query: 3   SEGQKGTLNPSAMLATLLSKRHKLHEELRNIEKQVYDMETSYLQDPGQCGNVLKGFEGFL 62
           S GQK + +P AML +LL+KR KL +ELR+IEKQVY++ETSYLQ+    GN LKGFEGFL
Sbjct: 2   SLGQKSSTDPGAMLTSLLNKREKLRQELRSIEKQVYELETSYLQESSHIGNALKGFEGFL 61

Query: 63  SSSKNTALLKRSRKFQPEDRLFSLSSVTSPAAEELAAGRDDGRSDFGPGRSKGG 116
           SSSK+TA  KRSRKFQPEDR+FSLSSVTSPAAEEL  GR+DGR++ GPGRSKGG
Sbjct: 62  SSSKSTASAKRSRKFQPEDRVFSLSSVTSPAAEELGVGREDGRAELGPGRSKGG 115


>AT4G14385.3 | Symbols:  | FUNCTIONS IN: molecular_function
          unknown; INVOLVED IN: biological_process unknown;
          LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures;
          EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
          DOMAIN/s: Histone H4 acetyltransferase, NuA4 complex,
          Eaf6 (InterPro:IPR015418); Has 35333 Blast hits to
          34131 proteins in 2444 species: Archae - 798; Bacteria
          - 22429; Metazoa - 974; Fungi - 991; Plants - 531;
          Viruses - 0; Other Eukaryotes - 9610 (source: NCBI
          BLink). | chr4:8287965-8288622 REVERSE LENGTH=129
          Length = 129

 Score =  120 bits (300), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 66/92 (71%), Positives = 77/92 (83%)

Query: 3  SEGQKGTLNPSAMLATLLSKRHKLHEELRNIEKQVYDMETSYLQDPGQCGNVLKGFEGFL 62
          S GQK + +P AML +LL+KR KL +ELR+IEKQVY++ETSYLQ+    GN LKGFEGFL
Sbjct: 2  SLGQKSSTDPGAMLTSLLNKREKLRQELRSIEKQVYELETSYLQESSHIGNALKGFEGFL 61

Query: 63 SSSKNTALLKRSRKFQPEDRLFSLSSVTSPAA 94
          SSSK+TA  KRSRKFQPEDR+FSLSSVTSPA 
Sbjct: 62 SSSKSTASAKRSRKFQPEDRVFSLSSVTSPAV 93