Miyakogusa Predicted Gene
- Lj5g3v1496810.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1496810.1 Non Chatacterized Hit- tr|I1LBB0|I1LBB0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.44281
PE,86.05,0,HELICASE_ATP_BIND_1,Helicase, superfamily 1/2, ATP-binding
domain; HELICASE_CTER,Helicase, C-termina,CUFF.55317.1
(345 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosph... 446 e-126
AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosph... 145 4e-35
AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA ... 144 7e-35
AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 137 9e-33
AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 137 9e-33
AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA... 137 1e-32
AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 136 2e-32
AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 133 1e-31
AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 132 3e-31
AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 132 3e-31
AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 132 3e-31
AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 132 4e-31
AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 131 8e-31
AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 131 8e-31
AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |... 127 1e-29
AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosph... 126 2e-29
AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 125 3e-29
AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 124 1e-28
AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 124 1e-28
AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 122 2e-28
AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |... 122 3e-28
AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 | ch... 120 1e-27
AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides,... 117 2e-26
AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 114 1e-25
AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 114 1e-25
AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosph... 114 1e-25
AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor ... 113 2e-25
AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |... 113 2e-25
AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleos... 113 2e-25
AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosph... 112 5e-25
AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 112 5e-25
AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosph... 111 9e-25
AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosph... 110 1e-24
AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosph... 110 1e-24
AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosph... 110 1e-24
AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family ... 110 1e-24
AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 110 2e-24
AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 109 3e-24
AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 109 3e-24
AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosph... 108 5e-24
AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 108 7e-24
AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosph... 108 7e-24
AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosph... 108 7e-24
AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWAR... 107 8e-24
AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase... 107 1e-23
AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 106 2e-23
AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosph... 106 2e-23
AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 105 6e-23
AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiatio... 103 2e-22
AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 103 2e-22
AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 102 4e-22
AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosph... 102 4e-22
AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) | c... 100 1e-21
AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosph... 100 2e-21
AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative | ... 100 2e-21
AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 98 8e-21
AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosph... 97 2e-20
AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosph... 96 3e-20
AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family prote... 96 3e-20
AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 96 3e-20
AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 96 3e-20
AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosph... 95 6e-20
AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosph... 95 6e-20
AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosph... 94 1e-19
AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 91 9e-19
AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside triph... 91 2e-18
AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 90 2e-18
AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 87 2e-17
AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 86 3e-17
AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 86 5e-17
AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 86 5e-17
AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 | chr4:900142... 77 2e-14
AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosph... 75 1e-13
AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family prot... 73 2e-13
AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 73 3e-13
AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 70 3e-12
AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosph... 68 8e-12
AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 58 1e-08
>AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:16631661-16634834
FORWARD LENGTH=626
Length = 626
Score = 446 bits (1148), Expect = e-126, Method: Compositional matrix adjust.
Identities = 229/323 (70%), Positives = 274/323 (84%), Gaps = 3/323 (0%)
Query: 25 QSFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLL 84
+SFE+LGLD RL+RAL KKGIEKPT IQ+ A P ILEGKDVVARAKTGSGKT AYLLPLL
Sbjct: 46 KSFEELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLLPLL 105
Query: 85 QKLFTG-SEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNNDL 143
QKLF+ S +KKLAP+AF+LVP+REL QQVY+EV SLIE+C+VQLK VQL S+M +D+
Sbjct: 106 QKLFSADSVSKKKLAPSAFILVPSRELCQQVYTEVSSLIELCRVQLKAVQLTSSMSASDM 165
Query: 144 QATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGYEEDINALT 203
+ LAG P++L+STPAC+ KC + GVL+ +++ SL LVLDEADLLLSYGYE+++ ++T
Sbjct: 166 RNALAGLPEILVSTPACIPKCFAAGVLEPTAVSESLSILVLDEADLLLSYGYEDNLRSVT 225
Query: 204 PHVPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQFWISCPA 263
+PR CQCLLMSAT+S+DV+KLKKLILHNP VLTL E N K++ +P NVQQFWISC A
Sbjct: 226 SIIPRRCQCLLMSATTSSDVEKLKKLILHNPIVLTLTE-DNDKEEAVPSNVQQFWISCSA 284
Query: 264 SDKLLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFWIKSAVLNAELPQNSRLHIL 323
DKLL+ILALLK +V KK+LIF NTIDMGFRLKLFLEKF IKSA+LN ELPQNSRLHIL
Sbjct: 285 QDKLLHILALLKLEVVQKKILIFINTIDMGFRLKLFLEKFGIKSAILNGELPQNSRLHIL 344
Query: 324 EEFNAGLFDYLIAT-DVSQSKEK 345
E+FNAGLFDYLIAT D SQ+K++
Sbjct: 345 EQFNAGLFDYLIATDDNSQTKKQ 367
>AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:19429083-19431617
REVERSE LENGTH=760
Length = 760
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 167/319 (52%), Gaps = 16/319 (5%)
Query: 25 QSFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLL 84
++FED G +++ A+ K+ EKPT IQ A P++L G+DV+ AKTGSGKT A++LP++
Sbjct: 228 KTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMI 287
Query: 85 QKLFTGSEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNNDLQ 144
+ E ++ P + PTREL+ Q++ E + L+V + M ++
Sbjct: 288 VHIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYG--LRVSAVYGGMSKHEQF 345
Query: 145 ATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGYEEDINALTP 204
L +++++TP + L L + AS LVLDEAD + G+E + ++
Sbjct: 346 KELKAGCEIVVATPGRLIDMLKMKAL--TMMRASY--LVLDEADRMFDLGFEPQVRSIVG 401
Query: 205 HVPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQFWISCPAS 264
+ Q LL SAT V+KL + IL +P +T+ EVG +DI Q + +
Sbjct: 402 QIRPDRQTLLFSATMPWKVEKLAREILSDPIRVTVGEVGMANEDI----TQVVNVIPSDA 457
Query: 265 DKLLYILALLKNGLVHKKVLIFTN---TIDMGFRLKLFLEKFWIKSAVLNAELPQNSRLH 321
+KL ++L L + VL+F + T+D +L L F K A L+ + Q SR+
Sbjct: 458 EKLPWLLEKLPGMIDEGDVLVFASKKATVDE-IEAQLTLNSF--KVAALHGDKDQASRME 514
Query: 322 ILEEFNAGLFDYLIATDVS 340
L++F +G+ LIATDV+
Sbjct: 515 TLQKFKSGVHHVLIATDVA 533
>AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA
helicase 1 | chr3:7887382-7889806 FORWARD LENGTH=610
Length = 610
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 158/321 (49%), Gaps = 23/321 (7%)
Query: 26 SFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLLQ 85
+ DLG+ P +V+AL +GIEK PIQ+ +EG+D++ RA+TG+GKT A+ +P++
Sbjct: 117 AIADLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIID 176
Query: 86 KL--FTGSEDRKKLAPNAFVLVPTRELSQQVYSEVL----SLIEICKVQLKVVQLNSNML 139
K+ F R K P VL PTREL++QV E SL IC + L
Sbjct: 177 KIIKFNAKHGRGK-NPQCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQMREL 235
Query: 140 NNDLQATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGYEEDI 199
N + DV + TP + + G L + + + +VLDEAD +L G+ ED+
Sbjct: 236 NYGI--------DVAVGTPGRIIDLMKRGALNLSEV----QFVVLDEADQMLQVGFAEDV 283
Query: 200 NALTPHVPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQFWI 259
+ +P Q ++ SAT + + L K L+NP LT+ VG+ D + + + I
Sbjct: 284 EIILQKLPAKRQSMMFSATMPSWIRSLTKKYLNNP--LTIDLVGD-SDQKLADGITMYSI 340
Query: 260 SCPASDKLLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFWIKSAVLNAELPQNSR 319
+ + + I L+K K ++FT T RL L K + K L+ ++ Q R
Sbjct: 341 AADSYGRASIIGPLVKEHGKGGKCIVFTQTKRDADRLAFGLAKSY-KCEALHGDISQAQR 399
Query: 320 LHILEEFNAGLFDYLIATDVS 340
L F G F L+ATDV+
Sbjct: 400 ERTLAGFRDGNFSILVATDVA 420
>AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=748
Length = 748
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 161/316 (50%), Gaps = 17/316 (5%)
Query: 30 LGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLLQKLFT 89
L L RL +L K+GI PIQR L+G+D++ARAKTG+GKT A+ +P++++L
Sbjct: 107 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTE 166
Query: 90 GSED-----RKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNNDLQ 144
+ D R P VL PTREL++QV E I+ L V + + Q
Sbjct: 167 EAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKE----IKESAPYLSTVCVYGGVSYTIQQ 222
Query: 145 ATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGYEEDINALTP 204
+ L DV++ TP + + G L+ + E LVLDEAD +L+ G+EE + ++
Sbjct: 223 SALTRGVDVVVGTPGRIIDLIEGRSLKLGEV----EYLVLDEADQMLAVGFEEAVESILE 278
Query: 205 HVPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQFWISCPAS 264
++P Q +L SAT V KL + L NP + L VG+ +D+ + + ++ + I+ ++
Sbjct: 279 NLPTKRQSMLFSATMPTWVKKLARKYLDNPLNIDL--VGD-QDEKLAEGIKLYAIATTST 335
Query: 265 DKLLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFWIKSAVLNAELPQNSRLHILE 324
K + L+ K ++FT T + L L I + L+ ++ Q+ R L
Sbjct: 336 SKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALSN-SIATEALHGDISQHQRERTLN 394
Query: 325 EFNAGLFDYLIATDVS 340
F G F L+ATDV+
Sbjct: 395 AFRQGKFTVLVATDVA 410
>AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=747
Length = 747
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 161/316 (50%), Gaps = 17/316 (5%)
Query: 30 LGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLLQKLFT 89
L L RL +L K+GI PIQR L+G+D++ARAKTG+GKT A+ +P++++L
Sbjct: 107 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTE 166
Query: 90 GSED-----RKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNNDLQ 144
+ D R P VL PTREL++QV E I+ L V + + Q
Sbjct: 167 EAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKE----IKESAPYLSTVCVYGGVSYTIQQ 222
Query: 145 ATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGYEEDINALTP 204
+ L DV++ TP + + G L+ + E LVLDEAD +L+ G+EE + ++
Sbjct: 223 SALTRGVDVVVGTPGRIIDLIEGRSLKLGEV----EYLVLDEADQMLAVGFEEAVESILE 278
Query: 205 HVPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQFWISCPAS 264
++P Q +L SAT V KL + L NP + L VG+ +D+ + + ++ + I+ ++
Sbjct: 279 NLPTKRQSMLFSATMPTWVKKLARKYLDNPLNIDL--VGD-QDEKLAEGIKLYAIATTST 335
Query: 265 DKLLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFWIKSAVLNAELPQNSRLHILE 324
K + L+ K ++FT T + L L I + L+ ++ Q+ R L
Sbjct: 336 SKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALSN-SIATEALHGDISQHQRERTLN 394
Query: 325 EFNAGLFDYLIATDVS 340
F G F L+ATDV+
Sbjct: 395 AFRQGKFTVLVATDVA 410
>AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA
helicase 2 | chr3:7892641-7895145 FORWARD LENGTH=616
Length = 616
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 159/324 (49%), Gaps = 23/324 (7%)
Query: 23 DDQSFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLP 82
D + +LG+ P +V+AL KGIEK PIQ+ +EG+D++ RA+TG+GKT A+ +P
Sbjct: 102 DGLAISELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIP 161
Query: 83 LLQKL--FTGSEDRKKLAPNAFVLVPTRELSQQVYSEVL----SLIEICKVQLKVVQLNS 136
++ K+ + R + P VL PTREL++QV E SL IC +
Sbjct: 162 IIDKIIKYNAKHGRGR-NPLCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQM 220
Query: 137 NMLNNDLQATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGYE 196
L+ + DV + TP V + G L + + + +VLDEAD +L G+
Sbjct: 221 RQLDYGV--------DVAVGTPGRVIDLMKRGALNLSEV----QFVVLDEADQMLQVGFA 268
Query: 197 EDINALTPHVPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQ 256
ED+ + +P Q ++ SAT + + L K L+NP LT+ VG+ D + +
Sbjct: 269 EDVEIILEKLPEKRQSMMFSATMPSWIRSLTKKYLNNP--LTVDLVGD-SDQKLADGITT 325
Query: 257 FWISCPASDKLLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFWIKSAVLNAELPQ 316
+ I + + I L+ K ++FT T RL L + + K L+ ++ Q
Sbjct: 326 YSIIADSYGRASIIGPLVTEHAKGGKCIVFTQTKRDADRLSYALARSF-KCEALHGDISQ 384
Query: 317 NSRLHILEEFNAGLFDYLIATDVS 340
+ R L F G F+ L+ATDV+
Sbjct: 385 SQRERTLAGFRDGHFNILVATDVA 408
>AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:9362176-9366449 REVERSE LENGTH=789
Length = 789
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 157/316 (49%), Gaps = 12/316 (3%)
Query: 26 SFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLLQ 85
+F +L L L+RA G +KPTPIQ PL L G+D+ A A TGSGKT A+ LP L+
Sbjct: 168 TFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLE 227
Query: 86 KLFTGSEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNNDLQA 145
+L ++ A +L PTREL+ Q++S + +L + ++ ++ + + +
Sbjct: 228 RLLF--RPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIV--GGLSVREQEV 283
Query: 146 TLAGPPDVLISTPACVAKCLSGGVLQAASIN-ASLETLVLDEADLLLSYGYEEDINALTP 204
L PD++++TP + L + S++ L L+LDEAD LL G+ +I L
Sbjct: 284 VLRSMPDIVVATPGRMIDHLRNSM----SVDLDDLAVLILDEADRLLQTGFATEITELVR 339
Query: 205 HVPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQFWISCPAS 264
P+ Q +L SAT + +V +L KL L+ P L+ + + V+ I
Sbjct: 340 LCPKRRQTMLFSATMTEEVKELVKLSLNKPLRLSADPSARRPPGLTEEVVR---IRRTRE 396
Query: 265 DKLLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFWIKSAVLNAELPQNSRLHILE 324
+L L KV+IF+ T RLK+ +K+A L+ L Q RL LE
Sbjct: 397 ANQEAVLLSLCTRTFKSKVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQRLDSLE 456
Query: 325 EFNAGLFDYLIATDVS 340
F D+LIATDV+
Sbjct: 457 LFRKQEVDFLIATDVA 472
>AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:24546601-24549148 REVERSE LENGTH=456
Length = 456
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 164/324 (50%), Gaps = 20/324 (6%)
Query: 25 QSFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLL 84
++F +LG+ LV+A + G + P+ IQ A P LEGKDV+ A+TGSGKT A+ +P+L
Sbjct: 9 KTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPIL 68
Query: 85 QKLFT---GSEDRKKLAPN----AFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSN 137
Q L SE +K P+ A VL PTREL+ Q+ + +L + L+ L
Sbjct: 69 QALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEAL--GADISLRCAVLVGG 126
Query: 138 MLNNDLQATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGYEE 197
+ L P V+++TP + +S + S+ SL+ LVLDEAD LL+ +E+
Sbjct: 127 IDRMQQTIALGKRPHVIVATPGRLWDHMSD--TKGFSLK-SLKYLVLDEADRLLNEDFEK 183
Query: 198 DINALTPHVPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQF 257
+N + +P + L SAT + V KL++ L NP + E + + Q
Sbjct: 184 SLNQILEEIPLERKTFLFSATMTKKVRKLQRACLRNPVKI---EAASKYSTVDTLKQQYR 240
Query: 258 WISCPASD-KLLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFWIKSAVLNAELPQ 316
+++ D L+YIL+ + +IFT T D L L L ++ ++ ++ Q
Sbjct: 241 FVAAKYKDCYLVYILSEMP----ESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQ 296
Query: 317 NSRLHILEEFNAGLFDYLIATDVS 340
+ RL L +F AG + L+ TDV+
Sbjct: 297 SKRLGALNKFKAGECNILVCTDVA 320
>AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 157/318 (49%), Gaps = 17/318 (5%)
Query: 26 SFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLP--- 82
SFE G P L+R +L G PTPIQ ++P+ ++G+D+VA AKTGSGKT YL+P
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 83 LLQKLFTGSEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNND 142
LQ++ S ++ P VL PTREL+ Q+ E + ++ L
Sbjct: 219 HLQRIRNDS----RMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTC--LYGGAPKGP 272
Query: 143 LQATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGYEEDINAL 202
L D++++TP + L ++ S+ + LVLDEAD +L G+E I +
Sbjct: 273 QLRDLERGADIVVATPGRLNDILE---MRRISLR-QISYLVLDEADRMLDMGFEPQIRKI 328
Query: 203 TPHVPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQFWISCP 262
+P Q L+ +AT V K+ +L NP + +GN + + K++ Q
Sbjct: 329 VKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVN---IGNVDELVANKSITQHIEVVA 385
Query: 263 ASDKLLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFWIKSAVLNAELPQNSRLHI 322
+K + +L++ KV+IF +T M +L L + +A ++ + Q R ++
Sbjct: 386 PMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTR-QFGAAAIHGDKSQPERDNV 444
Query: 323 LEEFNAGLFDYLIATDVS 340
L +F +G L+ATDV+
Sbjct: 445 LNQFRSGRTPVLVATDVA 462
>AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 157/318 (49%), Gaps = 17/318 (5%)
Query: 26 SFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLP--- 82
SFE G P L+R +L G PTPIQ ++P+ ++G+D+VA AKTGSGKT YL+P
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 83 LLQKLFTGSEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNND 142
LQ++ S ++ P VL PTREL+ Q+ E + ++ L
Sbjct: 219 HLQRIRNDS----RMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTC--LYGGAPKGP 272
Query: 143 LQATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGYEEDINAL 202
L D++++TP + L ++ S+ + LVLDEAD +L G+E I +
Sbjct: 273 QLRDLERGADIVVATPGRLNDILE---MRRISLR-QISYLVLDEADRMLDMGFEPQIRKI 328
Query: 203 TPHVPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQFWISCP 262
+P Q L+ +AT V K+ +L NP + +GN + + K++ Q
Sbjct: 329 VKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVN---IGNVDELVANKSITQHIEVVA 385
Query: 263 ASDKLLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFWIKSAVLNAELPQNSRLHI 322
+K + +L++ KV+IF +T M +L L + +A ++ + Q R ++
Sbjct: 386 PMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTR-QFGAAAIHGDKSQPERDNV 444
Query: 323 LEEFNAGLFDYLIATDVS 340
L +F +G L+ATDV+
Sbjct: 445 LNQFRSGRTPVLVATDVA 462
>AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 157/318 (49%), Gaps = 17/318 (5%)
Query: 26 SFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLP--- 82
SFE G P L+R +L G PTPIQ ++P+ ++G+D+VA AKTGSGKT YL+P
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 83 LLQKLFTGSEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNND 142
LQ++ S ++ P VL PTREL+ Q+ E + ++ L
Sbjct: 219 HLQRIRNDS----RMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTC--LYGGAPKGP 272
Query: 143 LQATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGYEEDINAL 202
L D++++TP + L ++ S+ + LVLDEAD +L G+E I +
Sbjct: 273 QLRDLERGADIVVATPGRLNDILE---MRRISLR-QISYLVLDEADRMLDMGFEPQIRKI 328
Query: 203 TPHVPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQFWISCP 262
+P Q L+ +AT V K+ +L NP + +GN + + K++ Q
Sbjct: 329 VKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVN---IGNVDELVANKSITQHIEVVA 385
Query: 263 ASDKLLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFWIKSAVLNAELPQNSRLHI 322
+K + +L++ KV+IF +T M +L L + +A ++ + Q R ++
Sbjct: 386 PMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTR-QFGAAAIHGDKSQPERDNV 444
Query: 323 LEEFNAGLFDYLIATDVS 340
L +F +G L+ATDV+
Sbjct: 445 LNQFRSGRTPVLVATDVA 462
>AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=618
Length = 618
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 157/318 (49%), Gaps = 17/318 (5%)
Query: 26 SFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLP--- 82
SFE G P L+R +L G PTPIQ ++P+ ++G+D+VA AKTGSGKT YL+P
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 83 LLQKLFTGSEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNND 142
LQ++ S ++ P VL PTREL+ Q+ E + ++ L
Sbjct: 219 HLQRIRNDS----RMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTC--LYGGAPKGP 272
Query: 143 LQATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGYEEDINAL 202
L D++++TP + L ++ S+ + LVLDEAD +L G+E I +
Sbjct: 273 QLRDLERGADIVVATPGRLNDILE---MRRISLR-QISYLVLDEADRMLDMGFEPQIRKI 328
Query: 203 TPHVPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQFWISCP 262
+P Q L+ +AT V K+ +L NP + +GN + + K++ Q
Sbjct: 329 VKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVN---IGNVDELVANKSITQHIEVVA 385
Query: 263 ASDKLLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFWIKSAVLNAELPQNSRLHI 322
+K + +L++ KV+IF +T M +L L + +A ++ + Q R ++
Sbjct: 386 PMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTR-QFGAAAIHGDKSQPERDNV 444
Query: 323 LEEFNAGLFDYLIATDVS 340
L +F +G L+ATDV+
Sbjct: 445 LNQFRSGRTPVLVATDVA 462
>AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 160/316 (50%), Gaps = 24/316 (7%)
Query: 27 FEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLLQK 86
FED L L+ + +KG E+P+PIQ + P+ L G+D++ARAK G+GKT A+ +P+L+K
Sbjct: 133 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEK 192
Query: 87 LFTGSEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNNDLQAT 146
+ D+ A ++VPTREL+ Q L + K+Q+ V +++ ++ ++
Sbjct: 193 I-----DQDNNVIQAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMR-- 245
Query: 147 LAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGYEEDINALTPHV 206
L P +L+ TP + GV + LV+DEAD LLS ++ + L +
Sbjct: 246 LYQPVHLLVGTPGRILDLTKKGV----CVLKDCSVLVMDEADKLLSQEFQPSVEHLISFL 301
Query: 207 PRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQFWISCPASDK 266
P S Q L+ SAT V K L NP+V+ L D++ K + QF+ K
Sbjct: 302 PESRQILMFSATFPVTVKDFKDRFLTNPYVINL------MDELTLKGITQFYAFVEERQK 355
Query: 267 LLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEK---FWIKSAVLNAELPQNSRLHIL 323
++ L L + L + +IF N+++ R++L +K ++A++ Q+ R +
Sbjct: 356 -IHCLNTLFSKLQINQSIIFCNSVN---RVELLAKKITELGYSCFYIHAKMLQDHRNRVF 411
Query: 324 EEFNAGLFDYLIATDV 339
+F G L+ TD+
Sbjct: 412 HDFRNGACRNLVCTDL 427
>AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 160/316 (50%), Gaps = 24/316 (7%)
Query: 27 FEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLLQK 86
FED L L+ + +KG E+P+PIQ + P+ L G+D++ARAK G+GKT A+ +P+L+K
Sbjct: 133 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEK 192
Query: 87 LFTGSEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNNDLQAT 146
+ D+ A ++VPTREL+ Q L + K+Q+ V +++ ++ ++
Sbjct: 193 I-----DQDNNVIQAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMR-- 245
Query: 147 LAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGYEEDINALTPHV 206
L P +L+ TP + GV + LV+DEAD LLS ++ + L +
Sbjct: 246 LYQPVHLLVGTPGRILDLTKKGV----CVLKDCSVLVMDEADKLLSQEFQPSVEHLISFL 301
Query: 207 PRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQFWISCPASDK 266
P S Q L+ SAT V K L NP+V+ L D++ K + QF+ K
Sbjct: 302 PESRQILMFSATFPVTVKDFKDRFLTNPYVINL------MDELTLKGITQFYAFVEERQK 355
Query: 267 LLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEK---FWIKSAVLNAELPQNSRLHIL 323
++ L L + L + +IF N+++ R++L +K ++A++ Q+ R +
Sbjct: 356 -IHCLNTLFSKLQINQSIIFCNSVN---RVELLAKKITELGYSCFYIHAKMLQDHRNRVF 411
Query: 324 EEFNAGLFDYLIATDV 339
+F G L+ TD+
Sbjct: 412 HDFRNGACRNLVCTDL 427
>AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |
chr3:1985697-1989666 REVERSE LENGTH=1088
Length = 1088
Score = 127 bits (319), Expect = 1e-29, Method: Composition-based stats.
Identities = 99/337 (29%), Positives = 158/337 (46%), Gaps = 23/337 (6%)
Query: 5 TTGETAPKQTVNEYEEEIDDQSFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKD 64
TTGE P + +FE GL P ++R LL G PTPIQ +P+ L+ +D
Sbjct: 425 TTGENIPAPYI----------TFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRD 474
Query: 65 VVARAKTGSGKTFAYLLPLLQKLFTGSEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEI 124
+VA AKTGSGKT YL+P L D + P +L PTREL+ Q+ E L
Sbjct: 475 IVAIAKTGSGKTLGYLIPAFILLRHCRNDSRN-GPTVLILAPTRELATQIQDEALRFGRS 533
Query: 125 CKVQLKVVQLNSNMLNNDLQATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVL 184
++ L L D++++TP + L ++ ++ LVL
Sbjct: 534 SRISCTC--LYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIDFQQVS----LLVL 587
Query: 185 DEADLLLSYGYEEDINALTPHVPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGN 244
DEAD +L G+E I + +P Q L+ +AT +V K+ +L NP + + V
Sbjct: 588 DEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRV-- 645
Query: 245 HKDDIIP-KNVQQFWISCPASDKLLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKF 303
D++ K + Q+ P +K + +L++ KV+IF +T + L + +
Sbjct: 646 --DELAANKAITQYVEVVPQMEKERRLEQILRSQERGSKVIIFCSTKRLCDHLARSVGRH 703
Query: 304 WIKSAVLNAELPQNSRLHILEEFNAGLFDYLIATDVS 340
+ + V++ + Q R +L +F +G LIATDV+
Sbjct: 704 F-GAVVIHGDKTQGERDWVLNQFRSGKSCVLIATDVA 739
>AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14265679-14267880
REVERSE LENGTH=733
Length = 733
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 160/335 (47%), Gaps = 32/335 (9%)
Query: 25 QSFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLL 84
+S+E+ L L++A+ + G +KP+PIQ A PL L+ +DV+ A+TGSGKT A++LP+L
Sbjct: 313 RSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML 372
Query: 85 ---QKLFTGSEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNN 141
+L SE+ + P A V+ PTREL+QQ+ E + ++ + ++
Sbjct: 373 AYISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEEQ 432
Query: 142 DLQATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGYEEDINA 201
L+ T +++I+TP + CL + A +N +VLDEAD ++ G+E +
Sbjct: 433 GLKITQGC--EIVIATPGRLIDCLE---RRYAVLN-QCNYVVLDEADRMIDMGFEPQVAG 486
Query: 202 LTPHVPRSC-----------------QCLLMSATSSADVDKLKKLILHNPFVLTLPEVGN 244
+ +P S + SAT V++L + L NP V+T+ G
Sbjct: 487 VLDAMPSSNLKPENEEEELDEKKIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTAGK 546
Query: 245 HKDDIIPKNVQQFWISCPASDKLLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFW 304
D I Q I S+K + LL + L K ++F NT + L+K
Sbjct: 547 TTDLI-----SQHVIMMKESEKFFRLQKLL-DELGEKTAIVFVNTKKNCDSIAKNLDKAG 600
Query: 305 IKSAVLNAELPQNSRLHILEEFNAGLFDYLIATDV 339
+ L+ Q R LE F A ++ L+ATDV
Sbjct: 601 YRVTTLHGGKSQEQREISLEGFRAKRYNVLVATDV 635
>AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:18859836-18862318 FORWARD LENGTH=528
Length = 528
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 160/331 (48%), Gaps = 28/331 (8%)
Query: 16 NEYEEE----IDDQSFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKT 71
N Y+ E FED L L+R + +KG EKP+PIQ + P+ L G D++ARAK
Sbjct: 141 NRYQTEDVTATKGNEFEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKN 200
Query: 72 GSGKTFAYLLPLLQKLFTGSEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKV 131
G+GKT A+ +P L+K+ D + A +LVPTREL+ Q L + K+++ V
Sbjct: 201 GTGKTGAFCIPTLEKI-----DPENNVIQAVILVPTRELALQTSQVCKELSKYLKIEVMV 255
Query: 132 VQLNSNMLNNDLQATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLL 191
+++ ++ ++ L P +L+ TP + GV + LV+DEAD LL
Sbjct: 256 TTGGTSLRDDIMR--LYQPVHLLVGTPGRILDLAKKGV----CVLKDCAMLVMDEADKLL 309
Query: 192 SYGYEEDINALTPHVPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIP 251
S ++ I L +P S Q L+ SAT V K L P+++ L D +
Sbjct: 310 SVEFQPSIEELIQFLPESRQILMFSATFPVTVKSFKDRYLKKPYIINL------MDQLTL 363
Query: 252 KNVQQFWISCPASDKLLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEK---FWIKSA 308
V Q++ K ++ L L + L + +IF N+++ R++L +K
Sbjct: 364 MGVTQYYAFVEERQK-VHCLNTLFSKLQINQSIIFCNSVN---RVELLAKKITELGYSCF 419
Query: 309 VLNAELPQNSRLHILEEFNAGLFDYLIATDV 339
++A++ Q+ R + +F G L+ TD+
Sbjct: 420 YIHAKMVQDHRNRVFHDFRNGACRNLVCTDL 450
>AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 156/316 (49%), Gaps = 24/316 (7%)
Query: 27 FEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLLQK 86
FED L L++ + +KG EKP+PIQ + P+ L G D++ARAK G+GKT A+ +P+L+K
Sbjct: 126 FEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEK 185
Query: 87 LFTGSEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNNDLQAT 146
+ D A +LVPTREL+ Q L + +Q+ V +++ ++ ++
Sbjct: 186 I-----DPNNNVIQAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMR-- 238
Query: 147 LAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGYEEDINALTPHV 206
L P +L+ TP + GV + LV+DEAD LLS ++ + L +
Sbjct: 239 LHQPVHLLVGTPGRILDLTKKGV----CVLKDCAMLVMDEADKLLSAEFQPSLEELIQFL 294
Query: 207 PRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQFWISCPASDK 266
P++ Q L+ SAT V K L P+V+ L D + V Q++ K
Sbjct: 295 PQNRQFLMFSATFPVTVKAFKDRHLRKPYVINL------MDQLTLMGVTQYYAFVEERQK 348
Query: 267 LLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEK---FWIKSAVLNAELPQNSRLHIL 323
++ L L + L + +IF N+++ R++L +K ++A++ Q+ R +
Sbjct: 349 -VHCLNTLFSKLQINQSIIFCNSVN---RVELLAKKITELGYSCFYIHAKMVQDHRNRVF 404
Query: 324 EEFNAGLFDYLIATDV 339
EF G L+ TD+
Sbjct: 405 HEFRNGACRNLVCTDL 420
>AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 156/316 (49%), Gaps = 24/316 (7%)
Query: 27 FEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLLQK 86
FED L L++ + +KG EKP+PIQ + P+ L G D++ARAK G+GKT A+ +P+L+K
Sbjct: 126 FEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEK 185
Query: 87 LFTGSEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNNDLQAT 146
+ D A +LVPTREL+ Q L + +Q+ V +++ ++ ++
Sbjct: 186 I-----DPNNNVIQAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMR-- 238
Query: 147 LAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGYEEDINALTPHV 206
L P +L+ TP + GV + LV+DEAD LLS ++ + L +
Sbjct: 239 LHQPVHLLVGTPGRILDLTKKGV----CVLKDCAMLVMDEADKLLSAEFQPSLEELIQFL 294
Query: 207 PRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQFWISCPASDK 266
P++ Q L+ SAT V K L P+V+ L D + V Q++ K
Sbjct: 295 PQNRQFLMFSATFPVTVKAFKDRHLRKPYVINL------MDQLTLMGVTQYYAFVEERQK 348
Query: 267 LLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEK---FWIKSAVLNAELPQNSRLHIL 323
++ L L + L + +IF N+++ R++L +K ++A++ Q+ R +
Sbjct: 349 -VHCLNTLFSKLQINQSIIFCNSVN---RVELLAKKITELGYSCFYIHAKMVQDHRNRVF 404
Query: 324 EEFNAGLFDYLIATDV 339
EF G L+ TD+
Sbjct: 405 HEFRNGACRNLVCTDL 420
>AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288618 REVERSE LENGTH=655
Length = 655
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 147/286 (51%), Gaps = 17/286 (5%)
Query: 60 LEGKDVVARAKTGSGKTFAYLLPLLQKLFTGSED-----RKKLAPNAFVLVPTRELSQQV 114
L+G+D++ARAKTG+GKT A+ +P++++L + D R P VL PTREL++QV
Sbjct: 44 LQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQV 103
Query: 115 YSEVLSLIEICKVQLKVVQLNSNMLNNDLQATLAGPPDVLISTPACVAKCLSGGVLQAAS 174
E I+ L V + + Q+ L DV++ TP + + G L+
Sbjct: 104 EKE----IKESAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGE 159
Query: 175 INASLETLVLDEADLLLSYGYEEDINALTPHVPRSCQCLLMSATSSADVDKLKKLILHNP 234
+ E LVLDEAD +L+ G+EE + ++ ++P Q +L SAT V KL + L NP
Sbjct: 160 V----EYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNP 215
Query: 235 FVLTLPEVGNHKDDIIPKNVQQFWISCPASDKLLYILALLKNGLVHKKVLIFTNTIDMGF 294
+ L VG+ +D+ + + ++ + I+ ++ K + L+ K ++FT T
Sbjct: 216 LNIDL--VGD-QDEKLAEGIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDAD 272
Query: 295 RLKLFLEKFWIKSAVLNAELPQNSRLHILEEFNAGLFDYLIATDVS 340
+ L L I + L+ ++ Q+ R L F G F L+ATDV+
Sbjct: 273 EVSLALSN-SIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVA 317
>AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=645
Length = 645
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 160/318 (50%), Gaps = 17/318 (5%)
Query: 26 SFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLP--- 82
SFE GL L+R + G P+PIQ ++P+ ++ +D+VA AKTGSGKT YL+P
Sbjct: 162 SFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFM 221
Query: 83 LLQKLFTGSEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNND 142
LQ++ S ++ P VL PTREL+ Q+ E L + K+ +
Sbjct: 222 HLQRIHNDS----RMGPTILVLSPTRELATQIQVEALKFGKSSKISCACL-YGGAPKGPQ 276
Query: 143 LQATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGYEEDINAL 202
L+ G D++++TP + L ++ S++ + LVLDEAD +L G+E I +
Sbjct: 277 LKEIERG-VDIVVATPGRLNDILE---MKRISLH-QVSYLVLDEADRMLDMGFEPQIRKI 331
Query: 203 TPHVPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQFWISCP 262
VP Q L+ +AT +V K+ +L NP + +GN + + K++ Q
Sbjct: 332 VNEVPTKRQTLMYTATWPKEVRKIAADLLVNPAQVN---IGNVDELVANKSITQTIEVLA 388
Query: 263 ASDKLLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFWIKSAVLNAELPQNSRLHI 322
+K + +L++ K++IF +T M +L L + + +A ++ + Q R +
Sbjct: 389 PMEKHSRLEQILRSQEPGSKIIIFCSTKRMCDQLARNLTRTF-GAAAIHGDKSQAERDDV 447
Query: 323 LEEFNAGLFDYLIATDVS 340
L +F +G L+ATDV+
Sbjct: 448 LNQFRSGRTPVLVATDVA 465
>AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 |
chr1:5568482-5570487 REVERSE LENGTH=491
Length = 491
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 166/317 (52%), Gaps = 15/317 (4%)
Query: 26 SFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLLQ 85
+FE LGL V + G+ KPTP+Q P IL G+DV+ A+TGSGKT A+ LP+L
Sbjct: 59 NFEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILH 118
Query: 86 KLFTGSEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNNDLQA 145
+L +ED A V+ PTREL+ Q+ + +L ++ V+ +ML +
Sbjct: 119 RL---AED--PYGVFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTM-- 171
Query: 146 TLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGYEEDINALTPH 205
+L P ++I+TP + K L + + + LVLDEAD +L G+++++ +
Sbjct: 172 SLVSRPHIVITTPGRI-KVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQC 230
Query: 206 VPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQFWISCPASD 265
+P+S Q LL SAT ++++ L + + + E D + QQF +
Sbjct: 231 LPKSRQTLLFSATMTSNLQALLEHSSNKAYFYEAYEGLKTVDTL----TQQFIFEDKDAK 286
Query: 266 K--LLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFWIKSAVLNAELPQNSRLHIL 323
+ L++IL+ +++ + + +IF +T RL L L++ +++ +++ Q+ RL L
Sbjct: 287 ELYLVHILSQMEDKGI-RSAMIFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSMRLSAL 345
Query: 324 EEFNAGLFDYLIATDVS 340
+F +G L+ATDV+
Sbjct: 346 SKFKSGKVPILLATDVA 362
>AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases | chr1:28947887-28951526 REVERSE
LENGTH=845
Length = 845
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 167/321 (52%), Gaps = 26/321 (8%)
Query: 27 FEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLLQK 86
FE L L P + A+ KKG + PTPIQR PLIL G DVVA A+TGSGKT A+L+P+L+K
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK 89
Query: 87 LFTGSEDRKKLAP----NAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNND 142
L K+ P A +L PTR+L++Q L + +++ ++ +M D
Sbjct: 90 L-------KQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSM--ED 140
Query: 143 LQATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGYEEDINAL 202
L PDV+I+TP + LS + ++ ++E +V DEAD L G+ E ++ +
Sbjct: 141 QFEELTKGPDVIIATPGRLMHLLS--EVDDMTLR-TVEYVVFDEADSLFGMGFAEQLHQI 197
Query: 203 TPHVPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQFWISCP 262
+ + Q LL SAT + + + K L P ++ L +V N I +++ +++
Sbjct: 198 LTQLSENRQTLLFSATLPSALAEFAKAGLREPQLVRL-DVENK----ISPDLKLSFLTVR 252
Query: 263 ASDKLLYILALLKNGLVH-KKVLIFTNTI-DMGFRLKLF-LEKFWIKSAVLNAELPQNSR 319
+K +L L++ + ++ LIF +T + F LF LE I+ +V ++ Q++R
Sbjct: 253 PEEKYSALLYLVREHISSDQQTLIFVSTKHHVEFVNSLFKLEN--IEPSVCYGDMDQDAR 310
Query: 320 LHILEEFNAGLFDYLIATDVS 340
+ F A LI TD++
Sbjct: 311 KIHVSRFRARKTMLLIVTDIA 331
>AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:20574634-20577141 FORWARD LENGTH=501
Length = 501
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 152/321 (47%), Gaps = 20/321 (6%)
Query: 25 QSFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLL 84
+SF D+G ++ + K G +PTPIQ +P+ ++G+D++ A+TGSGKT +YLLP +
Sbjct: 99 KSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAI 158
Query: 85 QKLFTGSEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVV--QLNSNMLNND 142
+ P VL PTREL+ Q+ E K++ + + D
Sbjct: 159 VHVNAQPMLAHGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRD 218
Query: 143 LQATLAGPPDVLISTPACVAKCLSGGVLQAASINASLET---LVLDEADLLLSYGYEEDI 199
LQ + +++I+TP + + S N +L LVLDEAD +L G++ I
Sbjct: 219 LQKGV----EIVIATPGRLIDMME-------SNNTNLRRVTYLVLDEADRMLDMGFDPQI 267
Query: 200 NALTPHVPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQFWI 259
+ H+ Q L SAT +V++L K L+NP+ + + D + ++Q
Sbjct: 268 RKIVSHIRPDRQTLYWSATWPKEVEQLSKKFLYNPYKVII----GSSDLKANRAIRQIVD 323
Query: 260 SCPASDKLLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFWIKSAVLNAELPQNSR 319
S K ++ LL++ + ++L+F +T ++ L + ++ + Q R
Sbjct: 324 VISESQKYNKLVKLLEDIMDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAER 383
Query: 320 LHILEEFNAGLFDYLIATDVS 340
+L EF +G + ATDV+
Sbjct: 384 DWVLSEFRSGKSPIMTATDVA 404
>AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:26358328-26361244 FORWARD LENGTH=633
Length = 633
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 163/325 (50%), Gaps = 25/325 (7%)
Query: 24 DQSFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPL 83
+++FE L L +++ + G + T IQ A P ++ G+DV+ A+TGSGKT A+L+P
Sbjct: 153 NKTFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPA 212
Query: 84 LQKLFTGSEDRKKLAP----NAFVLVPTRELSQQVYSEVLSLIEICKVQL-KVVQLNSNM 138
++ L+ R K P V+ PTREL+ Q Y L++ + KV+
Sbjct: 213 VELLY-----RVKFTPRNGTGVLVICPTRELAIQSYGVAKELLKYHSQTVGKVIGGEKRK 267
Query: 139 LNNDLQATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGYEED 198
++ LA ++L++TP + L I +L+ LV+DEAD +L +EED
Sbjct: 268 TEAEI---LAKGVNLLVATPGRLLDHLEN---TNGFIFKNLKFLVMDEADRILEQNFEED 321
Query: 199 INALTPHVPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQFW 258
+ + +P++ Q L SAT SA V+ L ++ L +P + +V + ++ + ++Q +
Sbjct: 322 LKKILNLLPKTRQTSLFSATQSAKVEDLARVSLTSPVYI---DVDEGRKEVTNEGLEQGY 378
Query: 259 ISCPASDKLLYILALLKNGLVHKKVLIFTNTI-DMGFRLKLFLEKFWIKSAVL--NAELP 315
P++ +LL++L LK KK+++F +T F +LF +IK L +
Sbjct: 379 CVVPSAMRLLFLLTFLKRFQGKKKIMVFFSTCKSTKFHAELFR---YIKFDCLEIRGGID 435
Query: 316 QNSRLHILEEFNAGLFDYLIATDVS 340
QN R +F L+ T+V+
Sbjct: 436 QNKRTPTFLQFIKAETGILLCTNVA 460
>AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7286356-7288842
FORWARD LENGTH=828
Length = 828
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 147/316 (46%), Gaps = 12/316 (3%)
Query: 27 FEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLLQK 86
+ GL +++ + K EKP PIQ A P+I+ G+D + AKTGSGKT ++LP+L+
Sbjct: 193 WHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRH 252
Query: 87 LFTGSEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNNDLQAT 146
+ P V+ PTREL QQ++S++ + ++ V S + +
Sbjct: 253 IKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQ--ISE 310
Query: 147 LAGPPDVLISTPACVAK--CLSGGVLQAASINASLETLVLDEADLLLSYGYEEDINALTP 204
L ++++ TP + C S G + + LV+DEAD + G+E I +
Sbjct: 311 LKRGTEIVVCTPGRMIDILCTSSGKITNLR---RVTFLVMDEADRMFDMGFEPQITRIIQ 367
Query: 205 HVPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQFWISCPAS 264
++ Q +L SAT V+ L + +L+ P + +VG ++ K++ Q P S
Sbjct: 368 NIRPERQTVLFSATFPRQVETLARKVLNKPVEI---QVGGRS--VVNKDITQLVEVRPES 422
Query: 265 DKLLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFWIKSAVLNAELPQNSRLHILE 324
D+ L +L LL K+L+F + + L + K L+ Q R +
Sbjct: 423 DRFLRLLELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTIS 482
Query: 325 EFNAGLFDYLIATDVS 340
+F + + LIAT V+
Sbjct: 483 DFKNDVCNLLIATSVA 498
>AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor
4A-III | chr3:6863790-6866242 FORWARD LENGTH=408
Length = 408
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 160/317 (50%), Gaps = 22/317 (6%)
Query: 26 SFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLLQ 85
SF D+G+ ++R + + G EKP+ IQ+ A IL+G+DV+A+A++G+GKT L + Q
Sbjct: 36 SFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKTSMIALSVCQ 95
Query: 86 KLFTGSEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNNDLQA 145
+ T S + + A +L PTREL+ Q + ++ +Q + N + D++
Sbjct: 96 VVDTSSREVQ-----ALILSPTRELATQTEKTIQAIGLHANIQAHAC-IGGNSVGEDIRK 149
Query: 146 TLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGYEEDINALTPH 205
G V+ TP V + L+ +I + L+LDE+D +LS G+++ I + +
Sbjct: 150 LEHG-VHVVSGTPGRVCDMIKRRSLRTRAI----KLLILDESDEMLSRGFKDQIYDVYRY 204
Query: 206 VPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQFWISCPASD 265
+P Q L+SAT ++ ++ + P + + +D++ + ++QF+++ +
Sbjct: 205 LPPDLQVCLVSATLPHEILEMTSKFMTEPVKILVK-----RDELTLEGIKQFFVAVEKEE 259
Query: 266 KLLYILALLKNGLVHKKVLIFTNT---IDMGFRLKLFLEKFWIKSAVLNAELPQNSRLHI 322
L L + L + +IF NT +D K+ F + S ++ ++PQ R I
Sbjct: 260 WKFDTLCDLYDTLTITQAVIFCNTKRKVDY-LSEKMRSHNFTVSS--MHGDMPQKERDAI 316
Query: 323 LEEFNAGLFDYLIATDV 339
+ EF +G LI TDV
Sbjct: 317 MNEFRSGDSRVLITTDV 333
>AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=712
Length = 712
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 151/307 (49%), Gaps = 11/307 (3%)
Query: 34 PRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLLQKLFTGSED 93
P R + G P+PIQ ++P+ ++ +D+VA AKTGSGKT YL+P L D
Sbjct: 238 PANGRMVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHLQRIHND 297
Query: 94 RKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNNDLQATLAGPPDV 153
++ P VL PTREL+ Q+ E L + K+ + L+ G D+
Sbjct: 298 -SRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACL-YGGAPKGPQLKEIERG-VDI 354
Query: 154 LISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGYEEDINALTPHVPRSCQCL 213
+++TP + L ++ S++ + LVLDEAD +L G+E I + VP Q L
Sbjct: 355 VVATPGRLNDILE---MKRISLH-QVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTL 410
Query: 214 LMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQFWISCPASDKLLYILAL 273
+ +AT +V K+ +L NP + +GN + + K++ Q +K + +
Sbjct: 411 MYTATWPKEVRKIAADLLVNPAQVN---IGNVDELVANKSITQTIEVLAPMEKHSRLEQI 467
Query: 274 LKNGLVHKKVLIFTNTIDMGFRLKLFLEKFWIKSAVLNAELPQNSRLHILEEFNAGLFDY 333
L++ K++IF +T M +L L + + +A ++ + Q R +L +F +G
Sbjct: 468 LRSQEPGSKIIIFCSTKRMCDQLARNLTRTF-GAAAIHGDKSQAERDDVLNQFRSGRTPV 526
Query: 334 LIATDVS 340
L+ATDV+
Sbjct: 527 LVATDVA 533
>AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:4351888-4353543 FORWARD LENGTH=551
Length = 551
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 167/369 (45%), Gaps = 64/369 (17%)
Query: 25 QSFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLL 84
+SFE+LGL L+ +L ++G PT +Q A P I++G D V ++ TGSGKT AYLLP+L
Sbjct: 110 KSFEELGLPDSLLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTLAYLLPIL 169
Query: 85 QKL--------FTGSEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQL-- 134
++ + SE+ K+ A ++ P+REL Q+ EV L + V ++VQ
Sbjct: 170 SEIGPLAEKSRSSHSENDKRTEIQAMIVAPSRELGMQIVREVEKL--LGPVHRRMVQQLV 227
Query: 135 -NSNMLNNDLQATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSY 193
+N + + +A P +++ TP +A+ GG L LVLDE D LLS+
Sbjct: 228 GGANRMRQE-EALKKNKPAIVVGTPGRIAEISKGGKLH----THGCRFLVLDEVDELLSF 282
Query: 194 GYEEDINALTPHVPRSC--------------QCLLMSATSSADVDKLKKLILHNPF---- 235
+ EDI+ + HV + Q +L+SAT V + K H P
Sbjct: 283 NFREDIHRILEHVGKRSGAGPKGEVDERANRQTILVSATVPFSVIRAAKSWSHEPVLVQA 342
Query: 236 --------------VLTLPEVGNHKDDIIPKNVQQFWISCPASDKLLYILALLKNGL--- 278
V++L + D I +Q S P + K Y ++ ++ +
Sbjct: 343 NKVTPLDTVQPSAPVMSLTPTTSEADGQIQTTIQ----SLPPALKHYYCISKHQHKVDTL 398
Query: 279 ---VH----KKVLIFTNTIDMGFRLKLFLEKFWIKSAVLNAELPQNSRLHILEEFNAGLF 331
VH + V+ F N + LE + SA ++ +L + R +L++F G
Sbjct: 399 RRCVHALDAQSVIAFMNHSRQLKDVVYKLEARGMNSAEMHGDLGKLGRSTVLKKFKNGEI 458
Query: 332 DYLIATDVS 340
L+ ++S
Sbjct: 459 KVLVTNELS 467
>AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7285342-7288842
FORWARD LENGTH=1166
Length = 1166
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 146/312 (46%), Gaps = 12/312 (3%)
Query: 31 GLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLLQKLFTG 90
GL +++ + K EKP PIQ A P+I+ G+D + AKTGSGKT ++LP+L+ +
Sbjct: 535 GLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQ 594
Query: 91 SEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNNDLQATLAGP 150
P V+ PTREL QQ++S++ + ++ V S + + L
Sbjct: 595 PPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQ--ISELKRG 652
Query: 151 PDVLISTPACVAK--CLSGGVLQAASINASLETLVLDEADLLLSYGYEEDINALTPHVPR 208
++++ TP + C S G + + LV+DEAD + G+E I + ++
Sbjct: 653 TEIVVCTPGRMIDILCTSSGKITNLR---RVTFLVMDEADRMFDMGFEPQITRIIQNIRP 709
Query: 209 SCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQFWISCPASDKLL 268
Q +L SAT V+ L + +L+ P + +VG ++ K++ Q P SD+ L
Sbjct: 710 ERQTVLFSATFPRQVETLARKVLNKPVEI---QVGGRS--VVNKDITQLVEVRPESDRFL 764
Query: 269 YILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFWIKSAVLNAELPQNSRLHILEEFNA 328
+L LL K+L+F + + L + K L+ Q R + +F
Sbjct: 765 RLLELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKN 824
Query: 329 GLFDYLIATDVS 340
+ + LIAT V+
Sbjct: 825 DVCNLLIATSVA 836
>AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:27378040-27379593 REVERSE LENGTH=414
Length = 414
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 164/336 (48%), Gaps = 24/336 (7%)
Query: 7 GETAPKQTVNEYEEEIDDQSFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVV 66
GE + Y+E D SF+ + L P L+R + G EKP+ IQ+ +G DV+
Sbjct: 25 GEEGEETFYTNYDEVCD--SFDAMELQPDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVI 82
Query: 67 ARAKTGSGKTFAYLLPLLQKLFTGSEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICK 126
+A++G+GKT + +LQ+L D + A VL PTREL+QQ+ + +L +
Sbjct: 83 QQAQSGTGKTATFCSGVLQQL-----DISLVQCQALVLAPTRELAQQIEKVMRALGDYLG 137
Query: 127 VQLKVVQLNSNMLNNDLQATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDE 186
V+ + +++ + Q L V++ TP V L L+A +I + VLDE
Sbjct: 138 VKAQACVGGTSVRED--QRVLQSGVHVVVGTPGRVFDLLRRQSLRADAI----KMFVLDE 191
Query: 187 ADLLLSYGYEEDINALTPHVPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHK 246
AD +LS G+++ I + +P Q + SAT + ++ + ++ P + + +
Sbjct: 192 ADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMPPEALEITRKFMNKPVRILV-----KR 246
Query: 247 DDIIPKNVQQFWISCPASDKLLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFWIK 306
D++ + ++QF+++ + L L L L + +IF NT ++ +K +
Sbjct: 247 DELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRR---KVDWLTDKMRSR 303
Query: 307 SAVLNA---ELPQNSRLHILEEFNAGLFDYLIATDV 339
++A ++ QN+R I+ EF +G LI TD+
Sbjct: 304 DHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDL 339
>AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25319798-25322071
REVERSE LENGTH=484
Length = 484
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 147/317 (46%), Gaps = 16/317 (5%)
Query: 27 FEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLLQK 86
F+D ++ A+ K G +PTPIQ +P+ L+G+D++ A+TGSGKT AYLLP L
Sbjct: 167 FQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVH 226
Query: 87 LFTGSEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNS--NMLNNDLQ 144
+ + P +L PTREL+ Q+ E V+ + + DL+
Sbjct: 227 VSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLR 286
Query: 145 ATLAGPPDVLISTPACVAKCLSGGVLQAASINASLET-LVLDEADLLLSYGYEEDINALT 203
+ +++I+TP + +L+ N T LVLDEAD +L G+E I +
Sbjct: 287 RGV----EIVIATPGRLID-----MLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIV 337
Query: 204 PHVPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQFWISCPA 263
+ Q LL SAT +V+ L + L +P+ + D +++ Q P
Sbjct: 338 SQIRPDRQTLLWSATWPREVETLARQFLRDPYKAII----GSTDLKANQSINQVIEIVPT 393
Query: 264 SDKLLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFWIKSAVLNAELPQNSRLHIL 323
+K +L LLK + K+LIF T ++ L + ++ + Q+ R +L
Sbjct: 394 PEKYNRLLTLLKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVL 453
Query: 324 EEFNAGLFDYLIATDVS 340
EF +G + ATDV+
Sbjct: 454 AEFKSGRSPIMTATDVA 470
>AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:17705382-17708744
FORWARD LENGTH=633
Length = 633
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 154/310 (49%), Gaps = 28/310 (9%)
Query: 47 KPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLLQKLFTGSE-----DRKKLAPNA 101
KPTP+QR A P++LEG+D++A A+TGSGKT A+ P++ + + + P A
Sbjct: 181 KPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIISGIMKDQHVQRPRGSRTVYPLA 240
Query: 102 FVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNNDLQATLAGPPDVLISTPACV 161
+L PTREL+ Q++ E V++ VV +N L+ G D+L++TP +
Sbjct: 241 VILSPTRELASQIHDEAKKFSYQTGVKV-VVAYGGTPINQQLRELERG-VDILVATPGRL 298
Query: 162 AKCLSGGVLQAASINASL-ETLVLDEADLLLSYGYEEDINALTPHV---PRSC-QCLLMS 216
+L+ A ++ + L LDEAD +L G+E I + + PR Q LL S
Sbjct: 299 ND-----LLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTLLFS 353
Query: 217 ATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQFWISCPASDKLLYILALL-- 274
AT ++ +L L N L + VG+ D I+ + +F + SDK +++ LL
Sbjct: 354 ATFPREIQRLAADFLANYIFLAVGRVGSSTDLIVQR--VEFVLD---SDKRSHLMDLLHA 408
Query: 275 --KNGLVHKK--VLIFTNTIDMGFRLKLFLEKFWIKSAVLNAELPQNSRLHILEEFNAGL 330
+NG+ K+ L+F T L+ +L + ++ + Q R L+ F +G
Sbjct: 409 QRENGIQGKQALTLVFVETKRGADSLENWLCINGFPATSIHGDRTQQEREVALKAFKSGR 468
Query: 331 FDYLIATDVS 340
L+ATDV+
Sbjct: 469 TPILVATDVA 478
>AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25318967-25322071
REVERSE LENGTH=591
Length = 591
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 147/317 (46%), Gaps = 16/317 (5%)
Query: 27 FEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLLQK 86
F+D ++ A+ K G +PTPIQ +P+ L+G+D++ A+TGSGKT AYLLP L
Sbjct: 167 FQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVH 226
Query: 87 LFTGSEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNS--NMLNNDLQ 144
+ + P +L PTREL+ Q+ E V+ + + DL+
Sbjct: 227 VSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLR 286
Query: 145 ATLAGPPDVLISTPACVAKCLSGGVLQAASINASLET-LVLDEADLLLSYGYEEDINALT 203
+ +++I+TP + +L+ N T LVLDEAD +L G+E I +
Sbjct: 287 RGV----EIVIATPGRLID-----MLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIV 337
Query: 204 PHVPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQFWISCPA 263
+ Q LL SAT +V+ L + L +P+ + D +++ Q P
Sbjct: 338 SQIRPDRQTLLWSATWPREVETLARQFLRDPYKAII----GSTDLKANQSINQVIEIVPT 393
Query: 264 SDKLLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFWIKSAVLNAELPQNSRLHIL 323
+K +L LLK + K+LIF T ++ L + ++ + Q+ R +L
Sbjct: 394 PEKYNRLLTLLKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVL 453
Query: 324 EEFNAGLFDYLIATDVS 340
EF +G + ATDV+
Sbjct: 454 AEFKSGRSPIMTATDVA 470
>AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6399724-6403007
REVERSE LENGTH=568
Length = 568
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 164/319 (51%), Gaps = 18/319 (5%)
Query: 26 SFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLLQ 85
+F+ L L + A+ + G + T IQ + +LEGKDV+ A+TGSGKT A+L+P ++
Sbjct: 90 TFDSLDLSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAVE 149
Query: 86 KLFTGSEDRKKLAP----NAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNN 141
LF +++ +P V+ PTREL+ Q + L++ + +V + N +
Sbjct: 150 LLF-----KERFSPRNGTGVIVICPTRELAIQTKNVAEELLKHHSQTVSMV-IGGNNRRS 203
Query: 142 DLQATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGYEEDINA 201
+ Q +G +++I+TP + L A I L+ LV+DEAD +L +EED+N
Sbjct: 204 EAQRIASG-SNLVIATPGRLLDHLQN---TKAFIYKHLKCLVIDEADRILEENFEEDMNK 259
Query: 202 LTPHVPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQFWISC 261
+ +P++ Q L SAT ++ V L ++ L +P + +V + + + + ++Q +
Sbjct: 260 ILKILPKTRQTALFSATQTSKVKDLARVSLTSPVHV---DVDDGRRKVTNEGLEQGYCVV 316
Query: 262 PASDKLLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFWIKSAVLNAELPQNSRLH 321
P+ +L+ +++ LK L K ++ F+ + F ++ ++ + + ++ + QN R
Sbjct: 317 PSKQRLILLISFLKKNLNKKIMVFFSTCKSVQFHTEI-MKISDVDVSDIHGGMDQNRRTK 375
Query: 322 ILEEFNAGLFDYLIATDVS 340
+F L+ TDV+
Sbjct: 376 TFFDFMKAKKGILLCTDVA 394
>AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family
protein | chr1:11479921-11482707 FORWARD LENGTH=537
Length = 537
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 153/313 (48%), Gaps = 33/313 (10%)
Query: 43 KGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLL-------QKLFTGSEDRK 95
K EKP+PIQ +P +L+G+D++ AKTGSGKT A+ +P + +K+ GS K
Sbjct: 132 KTFEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMHVLKKNKKIGGGS---K 188
Query: 96 KLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNNDLQATLAGPPDVLI 155
K+ P VL PTREL+ Q+ + E C ++ V S+ + A +G D++I
Sbjct: 189 KVNPTCLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSK-GPQISAIRSG-VDIVI 246
Query: 156 STPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGYEEDINALTPHVPRSCQCLLM 215
TP + + VL+ + ++ +VLDEAD +L G+EE + + + + Q ++
Sbjct: 247 GTPGRLRDLIESNVLRLSDVS----FVVLDEADRMLDMGFEEPVRFILSNTNKVRQMVMF 302
Query: 216 SATSSADVDKLKKLILH-NPFVLTLPEV---GNHKDDIIPKNVQQFWISCPASDKLLYIL 271
SAT DV KL + + NP + + V NH +V Q + ++
Sbjct: 303 SATWPLDVHKLAQEFMDPNPIKVIIGSVDLAANH-------DVMQIIEVLDERARDQRLI 355
Query: 272 ALLKNGLVHK----KVLIFTNTIDMGFRLKLFLEKFWIKSAVLNAELPQNSRLHILEEFN 327
ALL+ HK +VL+F RL+ FL++ K+ ++ Q+ R L F
Sbjct: 356 ALLEK--YHKSQKNRVLVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSLFK 413
Query: 328 AGLFDYLIATDVS 340
G L+ATDV+
Sbjct: 414 EGSCPLLVATDVA 426
>AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592586-4594128 REVERSE
LENGTH=415
Length = 415
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 162/329 (49%), Gaps = 24/329 (7%)
Query: 16 NEYEEEIDD--QSFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGS 73
+E+ DD +SF+ +GL L+R + G EKP+ IQ+ +G DV+ +A++G+
Sbjct: 28 DEFFTSYDDVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGT 87
Query: 74 GKTFAYLLPLLQKLFTGSEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQ 133
GKT + +LQ+L D + A VL PTREL+QQ+ + +L + V++
Sbjct: 88 GKTATFCSGVLQQL-----DFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACV 142
Query: 134 LNSNMLNNDLQATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSY 193
+++ + Q L V++ TP V L L+A +I + VLDEAD +LS
Sbjct: 143 GGTSVRED--QRILQAGVHVVVGTPGRVFDMLKRQSLRADNI----KMFVLDEADEMLSR 196
Query: 194 GYEEDINALTPHVPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKN 253
G+++ I + +P Q + SAT + ++ + + P + + +D++ +
Sbjct: 197 GFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILV-----KRDELTLEG 251
Query: 254 VQQFWISCPASDKLLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFWIKSAVLNA- 312
++QF+++ + L L L L + +IF NT ++ +K + ++A
Sbjct: 252 IKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRR---KVDWLTDKMRSRDHTVSAT 308
Query: 313 --ELPQNSRLHILEEFNAGLFDYLIATDV 339
++ QN+R I+ EF +G LI TD+
Sbjct: 309 HGDMDQNTRDIIMREFRSGSSRVLITTDL 337
>AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594128 REVERSE
LENGTH=412
Length = 412
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 162/329 (49%), Gaps = 24/329 (7%)
Query: 16 NEYEEEIDD--QSFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGS 73
+E+ DD +SF+ +GL L+R + G EKP+ IQ+ +G DV+ +A++G+
Sbjct: 28 DEFFTSYDDVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGT 87
Query: 74 GKTFAYLLPLLQKLFTGSEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQ 133
GKT + +LQ+L D + A VL PTREL+QQ+ + +L + V++
Sbjct: 88 GKTATFCSGVLQQL-----DFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACV 142
Query: 134 LNSNMLNNDLQATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSY 193
+++ + Q L V++ TP V L L+A +I + VLDEAD +LS
Sbjct: 143 GGTSVRED--QRILQAGVHVVVGTPGRVFDMLKRQSLRADNI----KMFVLDEADEMLSR 196
Query: 194 GYEEDINALTPHVPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKN 253
G+++ I + +P Q + SAT + ++ + + P + + +D++ +
Sbjct: 197 GFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILV-----KRDELTLEG 251
Query: 254 VQQFWISCPASDKLLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFWIKSAVLNA- 312
++QF+++ + L L L L + +IF NT ++ +K + ++A
Sbjct: 252 IKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRR---KVDWLTDKMRSRDHTVSAT 308
Query: 313 --ELPQNSRLHILEEFNAGLFDYLIATDV 339
++ QN+R I+ EF +G LI TD+
Sbjct: 309 HGDMDQNTRDIIMREFRSGSSRVLITTDL 337
>AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594094 REVERSE
LENGTH=402
Length = 402
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 162/329 (49%), Gaps = 24/329 (7%)
Query: 16 NEYEEEIDD--QSFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGS 73
+E+ DD +SF+ +GL L+R + G EKP+ IQ+ +G DV+ +A++G+
Sbjct: 18 DEFFTSYDDVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGT 77
Query: 74 GKTFAYLLPLLQKLFTGSEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQ 133
GKT + +LQ+L D + A VL PTREL+QQ+ + +L + V++
Sbjct: 78 GKTATFCSGVLQQL-----DFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACV 132
Query: 134 LNSNMLNNDLQATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSY 193
+++ + Q L V++ TP V L L+A +I + VLDEAD +LS
Sbjct: 133 GGTSVRED--QRILQAGVHVVVGTPGRVFDMLKRQSLRADNI----KMFVLDEADEMLSR 186
Query: 194 GYEEDINALTPHVPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKN 253
G+++ I + +P Q + SAT + ++ + + P + + +D++ +
Sbjct: 187 GFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVK-----RDELTLEG 241
Query: 254 VQQFWISCPASDKLLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFWIKSAVLNA- 312
++QF+++ + L L L L + +IF NT ++ +K + ++A
Sbjct: 242 IKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRR---KVDWLTDKMRSRDHTVSAT 298
Query: 313 --ELPQNSRLHILEEFNAGLFDYLIATDV 339
++ QN+R I+ EF +G LI TD+
Sbjct: 299 HGDMDQNTRDIIMREFRSGSSRVLITTDL 327
>AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2949152-2952205
REVERSE LENGTH=989
Length = 989
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 12/267 (4%)
Query: 25 QSFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLL 84
Q + GL +++ L K EKP PIQ A P+I+ G+D + AKTGSGKT ++LP+L
Sbjct: 396 QFWHQTGLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPML 455
Query: 85 QKLFTGSEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNNDLQ 144
+ + P V+ PTREL QQ+YS++ + + V S +
Sbjct: 456 RHIKDQPPVEAGDGPIGLVMAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQ--I 513
Query: 145 ATLAGPPDVLISTPACVAK--CLSGGVLQAASINASLETLVLDEADLLLSYGYEEDINAL 202
+ L ++++ TP + C S G + + LV+DEAD + G+E I +
Sbjct: 514 SELKRGTEIVVCTPGRMIDILCTSSGKITNLR---RVTYLVMDEADRMFDMGFEPQITRI 570
Query: 203 TPHVPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQFWISCP 262
++ Q +L SAT V+ L + +L+ P + +VG ++ K++ Q P
Sbjct: 571 VQNIRPDRQTVLFSATFPRQVETLARKVLNKPVEI---QVGGRS--VVNKDITQLVEIRP 625
Query: 263 ASDKLLYILALLKNGLVHKKVLIFTNT 289
S++ +L LL KVL+F +
Sbjct: 626 ESERFSRLLELLGEWYEKGKVLVFVRS 652
>AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=412
Length = 412
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 155/318 (48%), Gaps = 22/318 (6%)
Query: 25 QSFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLL 84
+SF+ +GL L+R + G EKP+ IQ+ +G DV+ +A++G+GKT + +L
Sbjct: 39 ESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVL 98
Query: 85 QKLFTGSEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNNDLQ 144
Q+L D L A VL PTREL+QQ+ + +L + V++ +++ + Q
Sbjct: 99 QQL-----DYALLQCQALVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVRED--Q 151
Query: 145 ATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGYEEDINALTP 204
L V++ TP V L L+ I + VLDEAD +LS G+++ I +
Sbjct: 152 RILQAGVHVVVGTPGRVFDMLRRQSLRPDCI----KMFVLDEADEMLSRGFKDQIYDIFQ 207
Query: 205 HVPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQFWISCPAS 264
+P Q + SAT + ++ + + P + + +D++ + ++QF+++
Sbjct: 208 LLPPKIQVGVFSATMPPEALEITRKFMSKPVRILV-----KRDELTLEGIKQFYVNVEKE 262
Query: 265 DKLLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFWIKSAVLNA---ELPQNSRLH 321
D L L L L + +IF NT ++ +K + ++A ++ QN+R
Sbjct: 263 DWKLETLCDLYETLAITQSVIFVNTRR---KVDWLTDKMRSRDHTVSATHGDMDQNTRDI 319
Query: 322 ILEEFNAGLFDYLIATDV 339
I+ EF +G LI TD+
Sbjct: 320 IMREFRSGSSRVLITTDL 337
>AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25472598-25476402
REVERSE LENGTH=788
Length = 788
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 161/339 (47%), Gaps = 19/339 (5%)
Query: 13 QTVNEYEEEIDDQSFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTG 72
+T N + + F+ L P ++A+ G E T +Q P+IL+GKDV+A+AKTG
Sbjct: 308 KTRNANDSYLTKTRFDHYPLSPLSLKAIKDAGYETMTVVQEATLPIILKGKDVLAKAKTG 367
Query: 73 SGKTFAYLLPLLQKLFTG---SEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEIC-KVQ 128
+GKT A+LLP ++ + S D K+ A V+ PTREL+ Q +E +L++ +
Sbjct: 368 TGKTVAFLLPSIEVVVKSPPTSPDNKRPPILALVICPTRELANQAATEANTLLKYHPSIG 427
Query: 129 LKVVQLNSNMLNNDLQATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEAD 188
++VV + L + + P +L++TP + + A + ++ LVLDEAD
Sbjct: 428 VQVV-IGGTRLGLEQKRMQTNPCQILVATPGRLKDHIENTPGFATRLKG-VKVLVLDEAD 485
Query: 189 LLLSYGYEEDINALTPHVPRSCQCLLMSATSSADVDK--LKKLILHNPFVLTLPE--VGN 244
LL G+ +DI + VP+ Q L SAT +V + L L + FV + E +
Sbjct: 486 HLLDMGFRKDIERIISAVPKERQTFLFSATVPEEVRQICLVALRRDHEFVNCVHEGTIET 545
Query: 245 HKDDIIPKNVQQFWISCPASDKLLYILALLKN---GLVHKKVLIFTNTIDMGFRLKLFLE 301
H + V+Q + + LL+ G V KV++F T + + L
Sbjct: 546 H------QQVRQMHMIASLDRHFSLLYTLLREHIMGNVDYKVIVFCTTAMVTKLVADLLG 599
Query: 302 KFWIKSAVLNAELPQNSRLHILEEFNAGLFDYLIATDVS 340
+ + +++ PQ+ R + EF L+ +DVS
Sbjct: 600 ELNLNVREIHSRKPQSYRTRVSNEFRKSKGLILVTSDVS 638
>AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:2790341-2794059
FORWARD LENGTH=850
Length = 850
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 154/323 (47%), Gaps = 15/323 (4%)
Query: 27 FEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLLQK 86
F+ L P ++A+ G E T +Q P+IL+GKDV+A+AKTG+GKT A+LLP ++
Sbjct: 384 FDQFPLSPLSLKAIKDAGFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEA 443
Query: 87 LFT---GSEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEIC-KVQLKVVQLNSNMLNND 142
+ S D ++ V+ PTREL+ Q +E +L++ + ++VV + L +
Sbjct: 444 VIKSPPASRDSRQPPIIVLVVCPTRELASQAAAEANTLLKYHPSIGVQVV-IGGTKLPTE 502
Query: 143 LQATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGYEEDINAL 202
+ P +L++TP + + A + ++ LVLDEAD LL G+ DI +
Sbjct: 503 QRRMQTNPCQILVATPGRLKDHIENTSGFATRL-MGVKVLVLDEADHLLDMGFRRDIERI 561
Query: 203 TPHVPRSCQCLLMSATSSADVDKLKKLILH--NPFVLTLPEVGNHKDDIIPKNVQQFWIS 260
VP+ Q L SAT +V ++ + L + F+ + E + V Q ++
Sbjct: 562 IAAVPKQRQTFLFSATVPEEVRQICHVALKRDHEFINCVQEGSGE----THQKVTQMYMI 617
Query: 261 CPASDKLLYILALLKNGL---VHKKVLIFTNTIDMGFRLKLFLEKFWIKSAVLNAELPQN 317
+ LLK + V KV+IF T + + L + + +++ PQ+
Sbjct: 618 ASLDRHFSLLHVLLKEHIADNVDYKVIIFCTTAMVTRLVADLLSQLSLNVREIHSRKPQS 677
Query: 318 SRLHILEEFNAGLFDYLIATDVS 340
R + +EF L+ +DVS
Sbjct: 678 YRTRVSDEFRKSKAIILVTSDVS 700
>AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWARD
LENGTH=621
Length = 621
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 161/344 (46%), Gaps = 51/344 (14%)
Query: 25 QSFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLL 84
++F++LGL ++ AL + IE PT IQ + P ++E K VV + TGSGKT AYLLP++
Sbjct: 112 ENFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLLPIV 171
Query: 85 QKLFTGSEDRKKLA-------PNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSN 137
Q + ED L P VL PTRELS+QVY S+ + + +V S
Sbjct: 172 QLM---REDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKSISHHARFRSILVSGGSR 228
Query: 138 M------LNNDLQATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLL 191
+ LNN + D+++ TP + + + G + + + LVLDEAD +
Sbjct: 229 IRPQEDSLNNAI--------DMVVGTPGRILQHIEEGNM----VYGDIAYLVLDEADTMF 276
Query: 192 SYGYEEDINA-LTPHVPRSC-------QCLLMSATSSADVDKLK----KLILHNPFVLTL 239
G+ +I L P R+ Q +L++AT + V KL + I H
Sbjct: 277 DRGFGPEIRKFLAPLNQRALKTNDQGFQTVLVTATMTMAVQKLVDEEFQGIEHLRTSTLH 336
Query: 240 PEVGNHKDDIIPKNVQQFWISCPASDKLLYILALLKNGLVH-KKVLIFTNTIDMGFRLKL 298
++ N + D F DKL +L +L+ L KV++F NT++ +
Sbjct: 337 KKIANARHD--------FIKLSGGEDKLEALLQVLEPSLAKGSKVMVFCNTLNSSRAVDH 388
Query: 299 FLEKFWIKSAVLNAELPQNSRLHILEEFN--AGLFDYLIATDVS 340
+L + I + + E+P R+ L++F G L+ TD++
Sbjct: 389 YLSENQISTVNYHGEVPAEQRVENLKKFKDEEGDCPTLVCTDLA 432
>AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase
family protein | chr5:2794540-2797548 FORWARD LENGTH=563
Length = 563
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 152/323 (47%), Gaps = 15/323 (4%)
Query: 27 FEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLLQK 86
F+ L P ++ + G + T +Q PLIL+GKD++A+AKTG+GKT A+LLP ++
Sbjct: 82 FDQFPLSPLTLKGIEDAGFKTMTVVQEATLPLILQGKDILAKAKTGTGKTVAFLLPSIEA 141
Query: 87 LFT---GSEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEIC-KVQLKVVQLNSNMLNND 142
+ S D + V+ PTREL+ Q +E L++ + ++VV + L +
Sbjct: 142 VIKAPPASRDNRHPPIIVLVVCPTRELACQAAAEANILLKYHPSIGVQVV-IGGTKLPTE 200
Query: 143 LQATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGYEEDINAL 202
+ P +L++TP + + A + ++ LVLDEAD LL G+ +I +
Sbjct: 201 QRRLQKSPCQILVATPGRLKDHIDNTSGFATRL-MGVKVLVLDEADHLLDMGFRREIERI 259
Query: 203 TPHVPRSCQCLLMSATSSADVDKLKKLILH--NPFVLTLPEVGNHKDDIIPKNVQQFWIS 260
VP+ Q L SAT S +V ++ + L + FV + E + V Q ++
Sbjct: 260 IAAVPKQRQTFLFSATVSDEVRQICHVALKRDHEFVNCVQEGAGETH----QKVSQMYMI 315
Query: 261 CPASDKLLYILALLKNGL---VHKKVLIFTNTIDMGFRLKLFLEKFWIKSAVLNAELPQN 317
+ LLK + V KV+IF T + + L K + +++ PQ+
Sbjct: 316 ASLDRHFSLLYGLLKKHITDNVGYKVIIFCTTAMVTRLVADLLGKLSLNVREIHSRKPQS 375
Query: 318 SRLHILEEFNAGLFDYLIATDVS 340
R + +EF L+ +DVS
Sbjct: 376 YRTRVSDEFRKSKSIILVTSDVS 398
>AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:23463284-23466451 REVERSE LENGTH=798
Length = 798
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 152/327 (46%), Gaps = 18/327 (5%)
Query: 25 QSFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLL 84
+ F++ + P ++AL GI K T +Q L+GKD + +AKTG+GK+ A+LLP +
Sbjct: 328 KRFDESCISPLTLKALSASGILKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAI 387
Query: 85 Q---KLFTGSEDRKKLAP-NAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLN 140
+ K + K+AP A +L PTREL+ Q+ +E +L++ +
Sbjct: 388 ETVLKAMNSGKGVNKVAPIFALILCPTRELASQIAAEGKALLKFHDGIGVQTLIGGTRFK 447
Query: 141 NDLQATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGYEEDIN 200
D Q + P +LI+TP + + + + A L+ ++DEADLLL G+ D+
Sbjct: 448 LDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMA-LKLFIVDEADLLLDLGFRRDVE 506
Query: 201 ALTPHVPRSCQCLLMSATSSADVDKLKKLILHNPF----VLTLPEVGNHKDDIIPKNVQQ 256
+ +PR Q LL SAT +V ++ +L+L + L V H V+Q
Sbjct: 507 KIIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETH------DKVRQ 560
Query: 257 FWISCPASDKLLYILALLK---NGLVHKKVLIFTNTIDMGFRLKLFLEKFWIKSAVLNAE 313
I P + LLK N K+++F +T + + L + + ++A
Sbjct: 561 SCIVAPHESHFHLVPHLLKEHINNTPDYKIIVFCSTGMVTSLMYTLLREMKLNVREIHAR 620
Query: 314 LPQNSRLHILEEFNAGLFDYLIATDVS 340
PQ R + +EF L+ +DVS
Sbjct: 621 KPQLHRTRVSDEFKESNRLILVTSDVS 647
>AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2980483-2983268
REVERSE LENGTH=541
Length = 541
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 159/325 (48%), Gaps = 32/325 (9%)
Query: 25 QSFEDL----GLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYL 80
+SF +L G + ++R L + G ++PTPIQR A P++L G++ A A TGSGKTFA++
Sbjct: 137 KSFAELSSRYGCEGYILRNLAELGFKEPTPIQRQAIPILLSGRECFACAPTGSGKTFAFI 196
Query: 81 LPLLQKLFTGSEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLN 140
P+L KL S D A +L P REL+ Q E LI+ ++++ +
Sbjct: 197 CPMLIKLKRPSTD----GIRAVILSPARELAAQTAREGKKLIKGSNFHIRLM-TKPLVKT 251
Query: 141 NDLQATLAGPPDVLISTPACVAKCLSGGVLQAASINAS-LETLVLDEADLLLSYGYEEDI 199
D DVLISTP + + ++A I+ S +E LVLDE+D L + I
Sbjct: 252 ADFSKLWC---DVLISTPMRLKR-----AIKAKKIDLSKVEYLVLDESDKLFEQSLLKQI 303
Query: 200 NAL-----TPHVPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNV 254
+ + P + RS L SAT V++L + I+H+ + + + +
Sbjct: 304 DCVVKACSNPSIIRS----LFSATLPDSVEELARSIMHDAVRVIIGRKNTASETV----K 355
Query: 255 QQFWISCPASDKLLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFWIKSAVLNAEL 314
Q+ + KLL + L + VLIF + + L L+ I++ V++++L
Sbjct: 356 QKLVFAGSEEGKLLALRQSFAESL-NPPVLIFVQSKERAKELYDELKCENIRAGVIHSDL 414
Query: 315 PQNSRLHILEEFNAGLFDYLIATDV 339
P R + +++F AG LIATDV
Sbjct: 415 PPGERENAVDQFRAGEKWVLIATDV 439
>AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:3576483-3580396 FORWARD LENGTH=845
Length = 845
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 164/351 (46%), Gaps = 28/351 (7%)
Query: 10 APKQTVNEYEEEIDD--------QSFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILE 61
+ KQ+V+ EE + + F++ + P ++AL GI K T +Q L+
Sbjct: 352 SKKQSVDNVMEEKQEPHDSIYSAKRFDESCISPLTLKALSASGIVKMTRVQDATLSECLD 411
Query: 62 GKDVVARAKTGSGKTFAYLLPLLQ---KLFTGSEDRKKLAPNAFVLV--PTRELSQQVYS 116
GKD + +AKTG+GK+ A+LLP ++ K + K+AP FVL+ PTREL+ Q+ +
Sbjct: 412 GKDALVKAKTGTGKSMAFLLPAIETVLKAMNSGKGVHKVAP-IFVLILCPTRELASQIAA 470
Query: 117 EVLSLIEICKVQLKVVQLNSNMLNNDLQATLAGPPDVLISTPACVAKCLSGGVLQAASIN 176
E +L++ + D Q + P +LI+TP + + + +
Sbjct: 471 EGKALLKNHDGIGVQTLIGGTRFRLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLM 530
Query: 177 ASLETLVLDEADLLLSYGYEEDINALTPHVPRSCQCLLMSATSSADVDKLKKLILHNPF- 235
A L+ ++DEADLLL G++ D+ + +PR Q LL SAT +V ++ +L+L
Sbjct: 531 A-LKLFIVDEADLLLDLGFKRDVEKIIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHS 589
Query: 236 ---VLTLPEVGNHKDDIIPKNVQQFWISCPASDKLLYILALLK---NGLVHKKVLIFTNT 289
+ L V H V+Q I P + LLK N + K+++F +T
Sbjct: 590 YIDTIGLGCVETH------DKVKQSCIVAPHESHFHLVPHLLKEHINNMPDYKIIVFCST 643
Query: 290 IDMGFRLKLFLEKFWIKSAVLNAELPQNSRLHILEEFNAGLFDYLIATDVS 340
+ + L + + ++A PQ R + +EF L+ +DVS
Sbjct: 644 GMVTSLMYTLLREMKLNVREIHARKPQLHRTCVSDEFKESNRLILVTSDVS 694
>AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiation
factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=407
Length = 407
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 161/329 (48%), Gaps = 29/329 (8%)
Query: 16 NEYEEEIDD--QSFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGS 73
+E+ DD +SF+ +GL L+R G EKP+ IQ+ +G DV+ +A++G+
Sbjct: 28 DEFFTSYDDVHESFDAMGLQENLLR-----GFEKPSAIQQRGIVPFCKGLDVIQQAQSGT 82
Query: 74 GKTFAYLLPLLQKLFTGSEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQ 133
GKT + +LQ+L D + A VL PTREL+QQ+ + +L + V++
Sbjct: 83 GKTATFCSGVLQQL-----DFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACV 137
Query: 134 LNSNMLNNDLQATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSY 193
+++ + Q L V++ TP V L L+A +I + VLDEAD +LS
Sbjct: 138 GGTSVRED--QRILQAGVHVVVGTPGRVFDMLKRQSLRADNI----KMFVLDEADEMLSR 191
Query: 194 GYEEDINALTPHVPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKN 253
G+++ I + +P Q + SAT + ++ + + P + + +D++ +
Sbjct: 192 GFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILV-----KRDELTLEG 246
Query: 254 VQQFWISCPASDKLLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFWIKSAVLNA- 312
++QF+++ + L L L L + +IF NT ++ +K + ++A
Sbjct: 247 IKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRR---KVDWLTDKMRSRDHTVSAT 303
Query: 313 --ELPQNSRLHILEEFNAGLFDYLIATDV 339
++ QN+R I+ EF +G LI TD+
Sbjct: 304 HGDMDQNTRDIIMREFRSGSSRVLITTDL 332
>AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:16069669-16071405 REVERSE LENGTH=542
Length = 542
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 161/326 (49%), Gaps = 24/326 (7%)
Query: 25 QSFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLL 84
++F D+ L+R L KGI PTPIQ P++L G+D++ A TGSGKT ++LP++
Sbjct: 97 KNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMI 156
Query: 85 QKLFTGSEDRKKLA----PNAFVLVPTRELSQQVYSE----VLSLIEICKVQLK-VVQLN 135
L E +A P A V+ P+REL++Q Y V SL+E +L+ ++ +
Sbjct: 157 -ILALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIG 215
Query: 136 SNMLNNDLQATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGY 195
+ + L G ++++TP + L+ + S++A L LDEAD L+ G+
Sbjct: 216 GVDMRSQLDVVKKG-VHIVVATPGRLKDILAK---KKMSLDAC-RLLTLDEADRLVDLGF 270
Query: 196 EEDINALTPHVPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQ 255
E+DI + H Q LL SAT A + L P + + G D+I + V+
Sbjct: 271 EDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAGAANLDVI-QEVE 329
Query: 256 QFWISCPASDKLLYILALLKNGLVHKKVLIFT-NTIDMGFRLKLFLEKFWIKSAVLNAEL 314
++ A K++Y+L L+ VLIF N D+ + L K +++ ++
Sbjct: 330 --YVKQEA--KIVYLLECLQK--TTPPVLIFCENKADVDDIHEYLLLK-GVEAVAIHGGK 382
Query: 315 PQNSRLHILEEFNAGLFDYLIATDVS 340
Q R + + F AG D L+ATDV+
Sbjct: 383 DQEDRDYAISLFKAGKKDVLVATDVA 408
>AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=407
Length = 407
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 154/318 (48%), Gaps = 27/318 (8%)
Query: 25 QSFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLL 84
+SF+ +GL L+R G EKP+ IQ+ +G DV+ +A++G+GKT + +L
Sbjct: 39 ESFDAMGLQENLLR-----GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVL 93
Query: 85 QKLFTGSEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNNDLQ 144
Q+L D L A VL PTREL+QQ+ + +L + V++ +++ + Q
Sbjct: 94 QQL-----DYALLQCQALVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVRED--Q 146
Query: 145 ATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGYEEDINALTP 204
L V++ TP V L L+ I + VLDEAD +LS G+++ I +
Sbjct: 147 RILQAGVHVVVGTPGRVFDMLRRQSLRPDCI----KMFVLDEADEMLSRGFKDQIYDIFQ 202
Query: 205 HVPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQFWISCPAS 264
+P Q + SAT + ++ + + P + + +D++ + ++QF+++
Sbjct: 203 LLPPKIQVGVFSATMPPEALEITRKFMSKPVRILV-----KRDELTLEGIKQFYVNVEKE 257
Query: 265 DKLLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFWIKSAVLNA---ELPQNSRLH 321
D L L L L + +IF NT ++ +K + ++A ++ QN+R
Sbjct: 258 DWKLETLCDLYETLAITQSVIFVNTRR---KVDWLTDKMRSRDHTVSATHGDMDQNTRDI 314
Query: 322 ILEEFNAGLFDYLIATDV 339
I+ EF +G LI TD+
Sbjct: 315 IMREFRSGSSRVLITTDL 332
>AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:21657099-21660352
FORWARD LENGTH=646
Length = 646
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 146/309 (47%), Gaps = 26/309 (8%)
Query: 47 KPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLLQKLFTGSE-DR----KKLAPNA 101
KPTP+QR A P++ G+D++A A+TGSGKT A+ P++ + +R + + P A
Sbjct: 168 KPTPVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLA 227
Query: 102 FVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNNDLQATLAGPPDVLISTPACV 161
+L PTREL+ Q++ E V++ VV +N ++ G D+L++TP +
Sbjct: 228 VILSPTRELACQIHDEARKFSYQTGVKV-VVAYGGTPVNQQIRELERG-VDILVATPGRL 285
Query: 162 AKCLSGGVLQAASINASLETLVLDEADLLLSYGYEEDINALTPHV----PRSCQCLLMSA 217
L G + + L LDEAD +L G+E I + + P Q +L SA
Sbjct: 286 NDLLERGRVSLQMV----RFLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSA 341
Query: 218 TSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQFWISCPASDKLLYILALL--- 274
T ++ +L L N L + VG+ D I+ + +F SDK +++ LL
Sbjct: 342 TFPREIQRLASDFLSNYIFLAVGRVGSSTDLIVQR--VEF---VHDSDKRSHLMDLLHAQ 396
Query: 275 -KNGLVHKK--VLIFTNTIDMGFRLKLFLEKFWIKSAVLNAELPQNSRLHILEEFNAGLF 331
+NG K+ L+F T L+ +L + ++ + Q R L F G
Sbjct: 397 RENGNQGKQALTLVFVETKKGADSLENWLCINGFPATTIHGDRSQQEREVALRSFKTGRT 456
Query: 332 DYLIATDVS 340
L+ATDV+
Sbjct: 457 PILVATDVA 465
>AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) |
chr5:24980542-24983879 REVERSE LENGTH=671
Length = 671
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 145/311 (46%), Gaps = 33/311 (10%)
Query: 44 GIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLLQKLFTG-SEDRKKL----A 98
GIE PIQ F ++L+G D+V RA+TG GKT A++LP+L+ L G ++ ++K+ +
Sbjct: 115 GIEALFPIQASTFDMVLDGADLVGRARTGQGKTLAFVLPILESLVNGPAKSKRKMGYGRS 174
Query: 99 PNAFVLVPTRELSQQV------YSEVLSLIEICKVQLKVVQLNSNMLNNDLQATLAGPPD 152
P+ VL+PTREL++QV Y L L C + L + D
Sbjct: 175 PSVLVLLPTRELAKQVAADFDAYGGSLGLSSCCLYGGDSYPVQEGKLKRGV--------D 226
Query: 153 VLISTPACVAKCLSGGVLQAASINAS-LETLVLDEADLLLSYGYEEDINALTPHVPRSC- 210
+++ TP + ++ +++ S L+ VLDEAD +L G+ ED+ + V S
Sbjct: 227 IVVGTPGRIKDH-----IERQNLDFSYLQFRVLDEADEMLRMGFVEDVELILGKVEDSTK 281
Query: 211 -QCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQFWISCPASDKLLY 269
Q LL SAT + V + L T+ VGN K +V+ I C +
Sbjct: 282 VQTLLFSATLPSWVKNISNRFLKRD-QKTIDLVGNDKMK-ASNSVRHIAIPCNKAAMARL 339
Query: 270 ILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFWIKSAVLNAELPQNSRLHILEEFNAG 329
I ++ + +IF T L L+ S L+ E+PQ+ R L F G
Sbjct: 340 IPDIISCYSSGGQTIIFAETKVQVSELSGLLD----GSRALHGEIPQSQREVTLAGFRNG 395
Query: 330 LFDYLIATDVS 340
F L+AT+V+
Sbjct: 396 KFATLVATNVA 406
>AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:16976783-16979392
FORWARD LENGTH=609
Length = 609
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 165/385 (42%), Gaps = 75/385 (19%)
Query: 26 SFEDLGLDPRLVRALLKK-GIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLL 84
SF LGLD +L L ++ G E PT +Q A P+IL G+DV+ A TG+GKT AYL PL+
Sbjct: 30 SFSSLGLDTKLSDQLKERMGFEAPTLVQAQAIPVILSGRDVLVNAPTGTGKTIAYLAPLI 89
Query: 85 QKLFTGSE--DRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNND 142
L S DR A V+VPTREL QVY + L+ + + +
Sbjct: 90 HHLQGHSPKVDRSH-GTFALVIVPTRELCLQVYETLEKLLHRFHWIVPGYVMGGEKKAKE 148
Query: 143 LQATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGYEEDINAL 202
+A L +LI+TP + L A+ ++ +L ++ DEAD +L GY ++I +
Sbjct: 149 -KARLRKGISILIATPGRLLDHLKN---TASFVHKNLRWVIFDEADSILELGYGKEIEQI 204
Query: 203 TPH--------------VPRSC--QCLLMSATSSADVDKLKKLILHNPFVLTL------- 239
VP+ Q LL+SAT + V+ L KL L +P ++ L
Sbjct: 205 IKLLGSGQNEQGEEDDIVPKGIQKQNLLLSATLNDKVNDLAKLSLDDPVMIGLDNTKLQQ 264
Query: 240 ------PEVGN-----------------HKDDIIPKNVQQFWISCPASDKLLYILALLKN 276
P + +D IP + Q ++ P +L+ +L++LKN
Sbjct: 265 NLSIESPAAPDSDAEDMVIHVNKSANPLSEDYGIPSQLVQRYLRVPCGARLVALLSVLKN 324
Query: 277 GL---VHKKVLIFTNTID-MGFRLKLFLEKFW-----------------IKSAVLNAELP 315
+KV++F +T D + F L E W K+ L+ +
Sbjct: 325 LFEREASQKVVVFFSTRDAVDFHYSLLSEFQWPPNSETEEEGTKELFLKCKTFRLHGSME 384
Query: 316 QNSRLHILEEFNAGLFDYLIATDVS 340
Q R F L++TDV+
Sbjct: 385 QEDRRSAFGTFKTEKQAVLLSTDVA 409
>AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative |
chr5:20841456-20843645 FORWARD LENGTH=591
Length = 591
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 161/326 (49%), Gaps = 24/326 (7%)
Query: 25 QSFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLL 84
++F+D+ ++ L +KGI +PTPIQ P+IL G+D++ A TGSGKT ++LP++
Sbjct: 146 KNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMI 205
Query: 85 QKLFTGSEDRKKLA----PNAFVLVPTRELSQQVYSE----VLSLIEICKVQLK-VVQLN 135
+ E +A P ++ P+REL++Q Y V L+E L+ ++ +
Sbjct: 206 M-IALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEVVEQFVAPLVEAGYPPLRSLLCIG 264
Query: 136 SNMLNNDLQATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGY 195
+ + L+ G ++++TP + L+ + S++A L LDEAD L+ G+
Sbjct: 265 GIDMRSQLEVVKRG-VHIVVATPGRLKDMLAK---KKMSLDAC-RYLTLDEADRLVDLGF 319
Query: 196 EEDINALTPHVPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQ 255
E+DI + H Q LL SAT + + L P + + G D+I + V+
Sbjct: 320 EDDIREVFDHFKSQRQTLLFSATMPTKIQIFARSALVKPVTVNVGRAGAANLDVI-QEVE 378
Query: 256 QFWISCPASDKLLYILALLKNGLVHKKVLIFT-NTIDMGFRLKLFLEKFWIKSAVLNAEL 314
++ A K++Y+L L+ VLIF N D+ + L K +++ ++
Sbjct: 379 --YVKQEA--KIVYLLECLQK--TSPPVLIFCENKADVDDIHEYLLLK-GVEAVAIHGGK 431
Query: 315 PQNSRLHILEEFNAGLFDYLIATDVS 340
Q R + + F AG D L+ATDV+
Sbjct: 432 DQEDREYAISSFKAGKKDVLVATDVA 457
>AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:19047960-19049967 FORWARD LENGTH=392
Length = 392
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 156/319 (48%), Gaps = 24/319 (7%)
Query: 25 QSFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLL 84
+SF+D+G++ +++R + G +KP+ IQ+ A IL+G+DV+A+A++G+GKT + +
Sbjct: 22 KSFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKTSMIAISVC 81
Query: 85 QKLFTGSEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNNDLQ 144
Q + S RK VL P+REL+ Q + ++ +Q + + D++
Sbjct: 82 QIVNISS--RK---VQVLVLSPSRELASQTEKTIQAIGAHTNIQAHAC-IGGKSIGEDIK 135
Query: 145 ATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGYEEDINALTP 204
G V TP V + G LQ ++ + LVLDE+D +LS G ++ I +
Sbjct: 136 KLERGVHAVS-GTPGRVYDMIKRGSLQTKAV----KLLVLDESDEMLSKGLKDQIYDVYR 190
Query: 205 HVPRSCQCLLMSATSSADVDKLKKLILHNPF-VLTLPEVGNHKDDIIPKNVQQFWISCPA 263
+P Q L+SAT ++ ++ + + +P +L P D++ + ++Q+++
Sbjct: 191 ALPHDIQVCLISATLPQEILEMTEKFMTDPVRILVKP------DELTLEGIKQYYVDVDK 244
Query: 264 SDKLLYILALLKNGLVHKKVLIFTNT---IDMGFRLKLFLEKFWIKSAVLNAELPQNSRL 320
+ L L L + +IF NT +D K+ F + S ++ + Q R
Sbjct: 245 EEWKFDTLCDLYGRLTINQAIIFCNTRQKVDW-LTEKMRSSNFIVSS--MHGDKRQKERD 301
Query: 321 HILEEFNAGLFDYLIATDV 339
I+ +F + LIA+DV
Sbjct: 302 DIMNQFRSFKSRVLIASDV 320
>AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:1612077-1615195
FORWARD LENGTH=593
Length = 593
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 155/335 (46%), Gaps = 33/335 (9%)
Query: 27 FEDLG--LDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLL 84
F DL L ++ AL + E TP+Q PL+ KDV A TGSGKT A+++PL+
Sbjct: 16 FSDLEPPLSGDIIEALNQSDFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLV 75
Query: 85 QKLFTGSEDRKKLAPN---AFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNN 141
+ L + K P+ ++ PTRELS Q+Y+ + V+ + +
Sbjct: 76 EILRRSTSFPPK--PHQVMGVIISPTRELSTQIYNVAQPFVSTLANVNSVLLVGGREVKA 133
Query: 142 DLQATLAGPPDVLISTPACVAKCLSGGVLQAASI--NASLETLVLDEADLLLSYGYEEDI 199
D++ +VLI TP ++ +++ I +LE L+LDEAD LL G++ +
Sbjct: 134 DMKIIEEEGCNVLIGTPGRLSD-----IMERMEILDFRNLEILILDEADRLLEMGFQRQV 188
Query: 200 NALTPHVPRSCQCLLMSATSSADVDKLKKLILHNPFVLTL---------PEVGNHKDDII 250
N + +P+ + L SAT + V++L K L NP + + ++ N K
Sbjct: 189 NYIISRLPKQRRTGLFSATQTEGVEELAKAGLRNPVRVEVRAKSKSESSQQLTNSK---T 245
Query: 251 PKNVQQFWISCPASDKLLYILALL-KNGLVHKKVLIFTNTIDMGFRLKLFLEKF-WIKSA 308
P + ++ C A K ++ LL KN KK+++F T L L K +KS
Sbjct: 246 PSGLHLEYMECEADKKSSQLVDLLIKNS--DKKLIVFFMTCASVDYWGLVLSKIPALKSI 303
Query: 309 VL---NAELPQNSRLHILEEFNAGLFDYLIATDVS 340
L + ++ QN+R L F L+ TDV+
Sbjct: 304 SLIPIHGDMKQNARDKALASFTKASSGALLCTDVA 338
>AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5738020-5743042
REVERSE LENGTH=826
Length = 826
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 168/378 (44%), Gaps = 71/378 (18%)
Query: 26 SFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLI-LEGKDVVARAKTGSGKTFAYLLPLL 84
++ + L P L++++ + ++PT IQ+ F + +GKDV+ A+TGSGKT A+ LP+L
Sbjct: 191 AWSSMRLHPLLMKSIYRLDFKEPTKIQKACFNVAAYQGKDVIGAAETGSGKTLAFGLPIL 250
Query: 85 QKL------------FTGSEDRKKLAPN---AFVLVPTRELSQQVYSEVLSLIEICKVQL 129
Q+L G E +K A A ++ PTREL+ QV + + + + +
Sbjct: 251 QRLLDEREKVGKLYALKGEEAQKYAADGYLRALIITPTRELALQVTEHLENAAK--NLSV 308
Query: 130 KVVQLNSNMLNNDLQATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADL 189
KVV + M + + L P+++++TP + + +S G ++ SL VLDEAD
Sbjct: 309 KVVPIVGGMFSEKQERRLKEKPEIVVATPGRLWELMSAGEKHLVELH-SLSFFVLDEADR 367
Query: 190 LLSYGYEEDINALTPHVP------------------------RSCQCLLMSATSSADVDK 225
++ G+ ++ ++ +P + Q + SAT + D
Sbjct: 368 MVERGHFRELQSILDLLPVTDKPNEGKTQTVKSNDTVLNVPKKKRQTFVFSATIALSSDF 427
Query: 226 LKKLILHNPF-----------VLTLPEVGNHKDD----------IIPKNVQQFWISCPAS 264
KKL + + L E +D+ I+ +++ +I C
Sbjct: 428 RKKLKRGSSKSKQSSSGEVNSIEVLSERAGMRDNVAIIDLTTTSILAPKIEESFIKCEEK 487
Query: 265 DK---LLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFWIKSAVLNAELPQNSRLH 321
+K L YIL++ G + ++F ++ + L+ + L +E+ Q +RL
Sbjct: 488 EKDAYLYYILSVHGQG----RTIVFCTSVTDLRHISGLLKILGLDVCTLFSEMKQRARLK 543
Query: 322 ILEEFNAGLFDYLIATDV 339
++ F A LIATD+
Sbjct: 544 SIDRFRASENGILIATDL 561
>AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 152/329 (46%), Gaps = 26/329 (7%)
Query: 26 SFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLLQ 85
+F D+ L L + + +PTP+QR A P++L +D++A A+TGSGKT A+ P++
Sbjct: 152 TFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIIS 211
Query: 86 KLFTGSE-----DRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLN 140
+ + + P A +L PTREL+ Q++ E V++ VV ++
Sbjct: 212 GIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKV-VVAYGGTPIH 270
Query: 141 NDLQATLAGPPDVLISTPACVAKCLSGGVLQAASINASL-ETLVLDEADLLLSYGYEEDI 199
L+ G D+L++TP + +L+ A ++ + L LDEAD +L G+E I
Sbjct: 271 QQLRELERG-CDILVATPGRL-----NDLLERARVSMQMIRFLALDEADRMLDMGFEPQI 324
Query: 200 NALTPHV---PRSC-QCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQ 255
+ + PR Q +L SAT + + +L + N L + VG+ D+I + V+
Sbjct: 325 RKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGS-STDLITQRVE 383
Query: 256 QFWISCPASDKLLYILALLKNGLVHKK----VLIFTNTIDMGFRLKLFLEKFWIKSAVLN 311
SDK +++ LL + L+F T L+ +L + ++
Sbjct: 384 ----FVQESDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIH 439
Query: 312 AELPQNSRLHILEEFNAGLFDYLIATDVS 340
+ Q R L F G L+ATDV+
Sbjct: 440 GDRTQQEREVALRSFKTGRTPILVATDVA 468
>AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 152/329 (46%), Gaps = 26/329 (7%)
Query: 26 SFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLLQ 85
+F D+ L L + + +PTP+QR A P++L +D++A A+TGSGKT A+ P++
Sbjct: 152 TFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIIS 211
Query: 86 KLFTGSE-----DRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLN 140
+ + + P A +L PTREL+ Q++ E V++ VV ++
Sbjct: 212 GIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKV-VVAYGGTPIH 270
Query: 141 NDLQATLAGPPDVLISTPACVAKCLSGGVLQAASINASL-ETLVLDEADLLLSYGYEEDI 199
L+ G D+L++TP + +L+ A ++ + L LDEAD +L G+E I
Sbjct: 271 QQLRELERG-CDILVATPGRL-----NDLLERARVSMQMIRFLALDEADRMLDMGFEPQI 324
Query: 200 NALTPHV---PRSC-QCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQ 255
+ + PR Q +L SAT + + +L + N L + VG+ D+I + V+
Sbjct: 325 RKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGS-STDLITQRVE 383
Query: 256 QFWISCPASDKLLYILALLKNGLVHKK----VLIFTNTIDMGFRLKLFLEKFWIKSAVLN 311
SDK +++ LL + L+F T L+ +L + ++
Sbjct: 384 ----FVQESDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIH 439
Query: 312 AELPQNSRLHILEEFNAGLFDYLIATDVS 340
+ Q R L F G L+ATDV+
Sbjct: 440 GDRTQQEREVALRSFKTGRTPILVATDVA 468
>AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 152/329 (46%), Gaps = 26/329 (7%)
Query: 26 SFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLLQ 85
+F D+ L L + + +PTP+QR A P++L +D++A A+TGSGKT A+ P++
Sbjct: 152 TFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIIS 211
Query: 86 KLFTGSE-----DRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLN 140
+ + + P A +L PTREL+ Q++ E V++ VV ++
Sbjct: 212 GIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKV-VVAYGGTPIH 270
Query: 141 NDLQATLAGPPDVLISTPACVAKCLSGGVLQAASINASL-ETLVLDEADLLLSYGYEEDI 199
L+ G D+L++TP + +L+ A ++ + L LDEAD +L G+E I
Sbjct: 271 QQLRELERG-CDILVATPGRL-----NDLLERARVSMQMIRFLALDEADRMLDMGFEPQI 324
Query: 200 NALTPHV---PRSC-QCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQ 255
+ + PR Q +L SAT + + +L + N L + VG+ D+I + V+
Sbjct: 325 RKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGS-STDLITQRVE 383
Query: 256 QFWISCPASDKLLYILALLKNGLVHKK----VLIFTNTIDMGFRLKLFLEKFWIKSAVLN 311
SDK +++ LL + L+F T L+ +L + ++
Sbjct: 384 ----FVQESDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIH 439
Query: 312 AELPQNSRLHILEEFNAGLFDYLIATDVS 340
+ Q R L F G L+ATDV+
Sbjct: 440 GDRTQQEREVALRSFKTGRTPILVATDVA 468
>AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 143/317 (45%), Gaps = 13/317 (4%)
Query: 26 SFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLLQ 85
+F GL P+L+ L G + PTPIQ A P L GK ++A A TGSGKT ++L+P++
Sbjct: 111 TFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIIS 170
Query: 86 KLFTGSEDR---KKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNND 142
+ T + ++ P A VL PTREL QV + L + + +V + + ++
Sbjct: 171 RCTTYHSEHPSDQRRNPLAMVLAPTRELCVQVEDQAKMLGKGLPFKTALV-VGGDPMSGQ 229
Query: 143 LQATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGYEEDINAL 202
L G +++I TP V LS ++ +I T VLDE D +L G+ + + +
Sbjct: 230 LYRIQQG-VELIIGTPGRVVDLLSKHTIELDNI----MTFVLDEVDCMLQRGFRDQVMQI 284
Query: 203 TPHVPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQFWISCP 262
+ + Q LL SAT S +V+K+ + + L +GN N W+
Sbjct: 285 FQALSQP-QVLLFSATISREVEKVGGSLAKE---IILVSIGNPNKPNKAVNQLAIWVDAK 340
Query: 263 ASDKLLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFWIKSAVLNAELPQNSRLHI 322
+ L+ + +N V+ ++ + +K+ ++ E P R +
Sbjct: 341 QKKQKLFDILRSQNHFKPPAVVYVSSRVGADLLANAITVVTGVKALSIHGEKPMKERRDV 400
Query: 323 LEEFNAGLFDYLIATDV 339
+ F G L++T V
Sbjct: 401 MGSFLGGEVPVLVSTGV 417
>AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 143/317 (45%), Gaps = 13/317 (4%)
Query: 26 SFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLLQ 85
+F GL P+L+ L G + PTPIQ A P L GK ++A A TGSGKT ++L+P++
Sbjct: 111 TFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIIS 170
Query: 86 KLFTGSEDR---KKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNND 142
+ T + ++ P A VL PTREL QV + L + + +V + + ++
Sbjct: 171 RCTTYHSEHPSDQRRNPLAMVLAPTRELCVQVEDQAKMLGKGLPFKTALV-VGGDPMSGQ 229
Query: 143 LQATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGYEEDINAL 202
L G +++I TP V LS ++ +I T VLDE D +L G+ + + +
Sbjct: 230 LYRIQQG-VELIIGTPGRVVDLLSKHTIELDNI----MTFVLDEVDCMLQRGFRDQVMQI 284
Query: 203 TPHVPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQFWISCP 262
+ + Q LL SAT S +V+K+ + + L +GN N W+
Sbjct: 285 FQALSQP-QVLLFSATISREVEKVGGSLAKE---IILVSIGNPNKPNKAVNQLAIWVDAK 340
Query: 263 ASDKLLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFWIKSAVLNAELPQNSRLHI 322
+ L+ + +N V+ ++ + +K+ ++ E P R +
Sbjct: 341 QKKQKLFDILRSQNHFKPPAVVYVSSRVGADLLANAITVVTGVKALSIHGEKPMKERRDV 400
Query: 323 LEEFNAGLFDYLIATDV 339
+ F G L++T V
Sbjct: 401 MGSFLGGEVPVLVSTGV 417
>AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:9843084-9845002
REVERSE LENGTH=614
Length = 614
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 142/322 (44%), Gaps = 41/322 (12%)
Query: 43 KGIEKPTPIQRV--AFPLILEGKDVVARAKTGSGKTFAYLLPLL---QKLFTGSEDRKKL 97
+G + P P++ PL LE +DV+ + TGSGKT A++LP+L +L E+ +
Sbjct: 218 RGSKIPHPMRNWEETIPLGLEQRDVIGISATGSGKTAAFVLPMLAYISRLPPMREENQTE 277
Query: 98 APNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNNDLQATLAGPPDVLIST 157
P A V+VPTREL+ Q+ E + + K V + L+ +++I+T
Sbjct: 278 GPYALVMVPTRELAHQIEEETVKFSRY--LGFKAVSITGWESIEKQALKLSQGCEIVIAT 335
Query: 158 PACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGYEEDINALTPHVPRSCQCL---- 213
P + CL + N LVLDEAD ++ +E ++ + +P C L
Sbjct: 336 PGRLLDCLERRYVVLNQCNY----LVLDEADRMIDMDFEPQVSEVLDVMP--CSNLKPEK 389
Query: 214 ---------------LMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQFW 258
+ SAT V++L + L NP V+T+ E K + Q
Sbjct: 390 EDEELEEKKIYRTTYMFSATMLLSVERLARKFLRNPVVVTIGET--------TKFITQQV 441
Query: 259 ISCPASDKLLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFW-IKSAVLNAELPQN 317
I SDK + L+ + K ++F NT + + LEK + L+A Q
Sbjct: 442 IMTKESDKFSRLKKLIDDLGDDKTAIVFVNTRNKVDYIVKNLEKVGRCRVTTLHAGKSQE 501
Query: 318 SRLHILEEFNAGLFDYLIATDV 339
R + LEEF F+ L+ TDV
Sbjct: 502 QRDYSLEEFKKKRFNVLVTTDV 523
>AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:2201531-2204662 FORWARD LENGTH=781
Length = 781
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 154/343 (44%), Gaps = 43/343 (12%)
Query: 25 QSFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLL 84
++F ++G +++AL ++ ++P IQ +AF +++GK + ++GSGKT AYL+P++
Sbjct: 374 KTFAEIGCSEDMMKALKEQNFDRPAHIQAMAFSPVIDGKSCIIADQSGSGKTLAYLVPVI 433
Query: 85 QKL----FTGSEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLN 140
Q+L G P VLVPT EL+ QV + S I V + + +
Sbjct: 434 QRLREEELQGHSKSSPGCPRVIVLVPTAELASQVLANCRS-ISKSGVPFRSMVVTGGFRQ 492
Query: 141 NDLQATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYG-YEEDI 199
L DVLI+TP ++ G+L ++L +LDE D+L +E +
Sbjct: 493 RTQLENLEQGVDVLIATPGRFTYLMNEGILGL----SNLRCAILDEVDILFGDDEFEAAL 548
Query: 200 NALTPHVPRSCQCLLMSATSSADVDKLKKLILHNPFVLTLPE---VGNHKDDIIPKNVQQ 256
L P + Q L ++AT L ++N V P+ V + + +++
Sbjct: 549 QNLINSSPVTAQYLFVTATLP--------LEIYNKLVEVFPDCEVVMGPRVHRVSNALEE 600
Query: 257 FWISCPASD------------KLLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFW 304
F + C D K +L +++ V K +IF N I+ +++ ++
Sbjct: 601 FLVDCSGDDNAEKTPETAFQNKKTALLQIMEENPV-SKTIIFCNKIETCRKVENIFKRVD 659
Query: 305 IKSAVL-----NAELPQNSRLHILEEFNAGLFD----YLIATD 338
K L +A L Q SRL ++EF + + +L+ TD
Sbjct: 660 RKERQLHVLPFHAALSQESRLTNMQEFTSSQPEENSLFLVCTD 702
>AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr3:19687968-19690423 FORWARD LENGTH=496
Length = 496
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 155/325 (47%), Gaps = 30/325 (9%)
Query: 27 FEDLGLDPRLVRAL-LKKGIEKPTPIQRVAFPLILE--GKDVVARAKTGSGKTFAYLLPL 83
FEDL L P L++ L ++ EKP+ IQ ++ P+I+ K ++A+A GSGKT ++L +
Sbjct: 93 FEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIMTPPHKHLIAQAHNGSGKTTCFVLGM 152
Query: 84 LQKLFTGSEDRKKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNNDL 143
L ++ D P A + PTREL+ Q + + + + ++ +S
Sbjct: 153 LSRV-----DPTLREPQALCICPTRELANQNMEVLQKMGKFTGITAELAVPDST---RGA 204
Query: 144 QATLAGPP---DVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSY-GYEEDI 199
A G P V+I TP + K ++ + +N L+ LV DEAD +L+ G+ +D
Sbjct: 205 PAATRGAPVSAHVVIGTPGTLKKWMA---FKRLGLN-HLKILVFDEADHMLATDGFRDDS 260
Query: 200 NALTPHVPR---SCQCLLMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQ 256
+ + R + Q LL SAT + V + +P L + ++D+ +V+Q
Sbjct: 261 LKIMKDIGRVNPNFQVLLFSATFNETVKDFVARTVKDPNQLFV-----KREDLALDSVKQ 315
Query: 257 FWISCPASDKLLYILA--LLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFWIKSAVLNAEL 314
+ + CP + ++ +++ G + + +IF T ++ L + ++ L
Sbjct: 316 YKVVCPKEQNKIEVIKDQIMELGDIGQ-TIIFVKTKASAQKVHKALAEMGYDVTSVHGNL 374
Query: 315 PQNSRLHILEEFNAGLFDYLIATDV 339
++ R I++EF L LIATDV
Sbjct: 375 TESDRDKIVKEFKECLTQVLIATDV 399
>AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26870262-26872152 REVERSE LENGTH=465
Length = 465
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 105/202 (51%), Gaps = 12/202 (5%)
Query: 36 LVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLLQKL-FTGSEDR 94
++ AL + G E TP+Q P + KDVV A TGSGKT A+LLP ++ + + S
Sbjct: 28 IIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSNSYPP 87
Query: 95 KKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNNDLQATLAGPPDVL 154
K ++ PTRELS Q++ +V + + + + V+ + N L + ++L
Sbjct: 88 KPHQVMGVIISPTRELSAQIH-KVARAVRLDFAKCREVEADMNTLEEE-------GANLL 139
Query: 155 ISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGYEEDINALTPHVPRSCQCLL 214
I TP ++ + ++ +LE L+LDEAD LL G+++ +N + +P+ + L
Sbjct: 140 IGTPGRLSDMMKR--MEFLDFR-NLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTGL 196
Query: 215 MSATSSADVDKLKKLILHNPFV 236
SAT + V L K L NP++
Sbjct: 197 FSATQTQAVADLAKAGLRNPYL 218
>AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26897235-26899381 REVERSE LENGTH=558
Length = 558
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 138/313 (44%), Gaps = 18/313 (5%)
Query: 36 LVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLLQKL-FTGSEDR 94
++ AL + G E TP+Q P + KDVV A TGSGKT A+LLP ++ + + S
Sbjct: 27 IIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSNSYPP 86
Query: 95 KKLAPNAFVLVPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNNDLQATLAGPPDVL 154
K ++ PTRELS Q++ + V+ + + D+ ++L
Sbjct: 87 KPHQVMGVIISPTRELSAQIHKVAEPFVSTLPNVNSVLLVGGREVEADMNTLEEEGANLL 146
Query: 155 ISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGYEEDINALTPHVPRSCQCLL 214
I TP ++ + ++ +LE L+LDEAD LL G+++ +N + +P+ + L
Sbjct: 147 IGTPGRLSDMMKR--MEFLDFR-NLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTGL 203
Query: 215 MSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQFWISCPA---SDKLLYIL 271
SAT + V L K L N + G + ++ C A S +L+++L
Sbjct: 204 FSATQTQAVADLAKAGLRNAMEVI---SGAESKSKTSSGLYCEYLKCEADQKSSQLVHLL 260
Query: 272 ALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFWIKSAV----LNAELPQNSRLHILEEFN 327
KN KK+++F T L L K ++ + ++ Q R L F
Sbjct: 261 IENKN----KKLVVFFMTCACVDYWGLVLSKIPTLKSISFFSTHGKMDQKGRDTALASFT 316
Query: 328 AGLFDYLIATDVS 340
L+ TDV+
Sbjct: 317 EASSGVLLCTDVA 329
>AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:22298668-22301719 REVERSE LENGTH=739
Length = 739
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 138/294 (46%), Gaps = 40/294 (13%)
Query: 49 TPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLLQKLFTGSEDRKKLAP----NAFVL 104
T +Q A P L G+D++ A+TGSGKT A+++P+L+KL R++ +P ++
Sbjct: 95 TDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPILEKLH-----RERWSPEDGVGCIII 149
Query: 105 VPTRELSQQVYSEVLSLIEICKVQLKVVQLNSNMLNNDLQATLAGPPDVLISTPACVAKC 164
PTREL+ Q + + + + K + L D++ ++L+ C
Sbjct: 150 SPTRELAAQTFGVLNKVGKFHKFSAGL--LIGGREGVDVEKERVHEMNILV--------C 199
Query: 165 LSGGVLQAASINASLE-----TLVLDEADLLLSYGYEEDINALTPHVPRSCQCLLMSATS 219
G +LQ + E L+LDEAD +L ++ ++ + +P+ Q LL SAT
Sbjct: 200 APGRLLQHMDETPNFECPQLQILILDEADRVLDSAFKGQLDPIISQLPKHRQTLLFSATQ 259
Query: 220 SADVDKLKKLILHNPFVLTLPEVGNHKDDI--IPKNVQQFWISCPASDKLLYILALLKNG 277
+ V L +L L +P +++ H + + P ++ Q + P KL + + +K
Sbjct: 260 TKKVKDLARLSLRDPEYISV-----HAEAVTATPTSLMQTVMIVPVEKKLDMLWSFIKTH 314
Query: 278 LVHKKVLIFTNTIDMGFRLKLFLEKF-----WIKSAVLNAELPQNSRLHILEEF 326
L + ++L+F +T ++K E F I L+ ++ Q R+ + +F
Sbjct: 315 L-NSRILVFLSTKK---QVKFVHEAFNKLRPGIPLKSLHGKMSQEKRMGVYSQF 364
>AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3553334-3556646 FORWARD LENGTH=427
Length = 427
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 150/346 (43%), Gaps = 34/346 (9%)
Query: 2 AEQTTGETAPKQTVNEYEEEIDDQSFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILE 61
+ GE K V I F D L P L+RA++ G E P+ +Q P +
Sbjct: 28 GNKVNGEAVKKGYVG-----IHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAIL 82
Query: 62 GKDVVARAKTGSGKTFAYLLPLLQKLFTGSEDRKKLAPNAFVLVPTRELSQQVYSEVL-- 119
G DV+ +AK+G GKT ++L LQ++ + +A VL TREL+ Q+ +E +
Sbjct: 83 GMDVICQAKSGMGKTAVFVLSTLQQI-----EPSPGQVSALVLCHTRELAYQICNEFVRF 137
Query: 120 -SLIEICKVQLKV----VQLNSNMLNNDLQATLAGPPDVLISTPACVAKCLSGGVLQAAS 174
+ + KV + ++++ ++L N+ P +++ TP V L +
Sbjct: 138 STYLPDTKVSVFYGGVNIKIHKDLLKNEC-------PHIVVGTPGRVLALAREKDLSLKN 190
Query: 175 INASLETLVLDEADLLL-SYGYEEDINALTPHVPRSCQCLLMSATSSADVDKLKKLILHN 233
+ +LDE D +L S D+ + P Q ++ SAT S ++ + K + +
Sbjct: 191 VRH----FILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQD 246
Query: 234 PFVLTLPEVGNHKDDIIPKNVQQFWISCPASDKLLYILALLKNGLVHKKVLIFTNTIDMG 293
P + + + + + Q +I +K + LL + L +V+IF ++
Sbjct: 247 PMEIYVDDEAK----LTLHGLVQHYIKLSEMEKNRKLNDLL-DALDFNQVVIFVKSVSRA 301
Query: 294 FRLKLFLEKFWIKSAVLNAELPQNSRLHILEEFNAGLFDYLIATDV 339
L L + S +++ + Q RL + F G L+ATD+
Sbjct: 302 AELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDL 347
>AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=427
Length = 427
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 150/346 (43%), Gaps = 34/346 (9%)
Query: 2 AEQTTGETAPKQTVNEYEEEIDDQSFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILE 61
+ GE K V I F D L P L+RA++ G E P+ +Q P +
Sbjct: 28 GNKVNGEAVKKGYVG-----IHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAIL 82
Query: 62 GKDVVARAKTGSGKTFAYLLPLLQKLFTGSEDRKKLAPNAFVLVPTRELSQQVYSEVL-- 119
G DV+ +AK+G GKT ++L LQ++ + +A VL TREL+ Q+ +E +
Sbjct: 83 GMDVICQAKSGMGKTAVFVLSTLQQI-----EPSPGQVSALVLCHTRELAYQICNEFVRF 137
Query: 120 -SLIEICKVQLKV----VQLNSNMLNNDLQATLAGPPDVLISTPACVAKCLSGGVLQAAS 174
+ + KV + ++++ ++L N+ P +++ TP V L +
Sbjct: 138 STYLPDTKVSVFYGGVNIKIHKDLLKNEC-------PHIVVGTPGRVLALAREKDLSLKN 190
Query: 175 INASLETLVLDEADLLL-SYGYEEDINALTPHVPRSCQCLLMSATSSADVDKLKKLILHN 233
+ +LDE D +L S D+ + P Q ++ SAT S ++ + K + +
Sbjct: 191 VRH----FILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQD 246
Query: 234 PFVLTLPEVGNHKDDIIPKNVQQFWISCPASDKLLYILALLKNGLVHKKVLIFTNTIDMG 293
P + + + + + Q +I +K + LL + L +V+IF ++
Sbjct: 247 PMEIYVDDEAK----LTLHGLVQHYIKLSEMEKNRKLNDLL-DALDFNQVVIFVKSVSRA 301
Query: 294 FRLKLFLEKFWIKSAVLNAELPQNSRLHILEEFNAGLFDYLIATDV 339
L L + S +++ + Q RL + F G L+ATD+
Sbjct: 302 AELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDL 347
>AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 |
chr4:9001426-9004534 FORWARD LENGTH=522
Length = 522
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 165/377 (43%), Gaps = 88/377 (23%)
Query: 32 LDPRLVRALLKKGIEKPTPIQRVAF-----PLILEGKDVVARAKTGSGKTFAYLLPLLQK 86
L+P+L +AL GI P+Q + P E +D+ + TGSGKT +Y LP++Q
Sbjct: 38 LNPKLKKALENMGISSLFPVQVAVWHETIGPGGFE-RDICVNSPTGSGKTLSYALPIVQL 96
Query: 87 LFTGSEDRKKLAPNAFVLVPTRELSQQVYSEVLSLI-------------------EICKV 127
L + R A V++PTR+L+ QV +V I EI ++
Sbjct: 97 LAS----RPVRCLRALVVLPTRDLALQV-KDVFDAIAPAVGLSVGSAVGQSSIAGEISQL 151
Query: 128 QLKVVQLNSNMLN--NDLQATLAGPPDVLISTPACVAKCLS---GGVLQAASINASLETL 182
+K +L++ + +DL L D+L++TP + ++ G L+ L L
Sbjct: 152 -IKTPKLDAGICYDPDDLSQNLESAVDILVATPGRLMDHINNTKGFTLE------HLRYL 204
Query: 183 VLDEADLLLSYGYEEDI---------------NALTPHVPRSCQCL-------------- 213
V+DE D LL Y+ + + TP VP + L
Sbjct: 205 VVDETDRLLREAYQSWLPTVLQLTQTSDDSLFPSFTPFVPSAFGSLQTVRRQSVERGFKG 264
Query: 214 ---------LMSATSSADVDKLKKLILHNPFVLTLPEVGNHKDDIIPKNVQQFWISCPAS 264
++SAT + D KL +L LH+P +T G + +P+ ++ + C
Sbjct: 265 KPYPRLVKMVLSATLTQDPSKLIQLDLHHPLFMT---TGGSRYR-LPEKLECLRLICETG 320
Query: 265 DKLLYILALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFW---IKSAVLNAELPQNSRLH 321
K +Y++ALLK+ +K +IFT++++ RL L F IK+ + L Q+ R
Sbjct: 321 MKPVYLVALLKS-WEGEKCIIFTSSVETTRRLCKLLNFFGDPKIKAKEYSGGLNQSLRSK 379
Query: 322 ILEEFNAGLFDYLIATD 338
L+ F G L+A+D
Sbjct: 380 ELKAFRKGDIQVLVASD 396
>AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359628-360734
FORWARD LENGTH=368
Length = 368
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 127/288 (44%), Gaps = 13/288 (4%)
Query: 55 AFPLILEGKDVVARAKTGSGKTFAYLLPLLQKLFTGSEDR---KKLAPNAFVLVPTRELS 111
A P L GK ++A A TGSGKT ++L+P++ + T + ++ P A VL PTREL
Sbjct: 3 AIPAALTGKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRNPLAMVLAPTRELC 62
Query: 112 QQVYSEVLSLIEICKVQLKVVQLNSNMLNNDLQATLAGPPDVLISTPACVAKCLSGGVLQ 171
QV + L + + +V + + ++ L G +++I TP V LS ++
Sbjct: 63 VQVEDQAKMLGKGLPFKTALV-VGGDPMSGQLYRIQQG-VELIIGTPGRVVDLLSKHTIE 120
Query: 172 AASINASLETLVLDEADLLLSYGYEEDINALTPHVPRSCQCLLMSATSSADVDKLKKLIL 231
+I T VLDE D +L G+ + + + + + Q LL SAT S +V+K+ +
Sbjct: 121 LDNI----MTFVLDEVDCMLQRGFRDQVMQIFQALSQP-QVLLFSATISREVEKVGGSLA 175
Query: 232 HNPFVLTLPEVGNHKDDIIPKNVQQFWISCPASDKLLYILALLKNGLVHKKVLIFTNTID 291
+ L +GN N W+ + L+ + +N V+ ++ +
Sbjct: 176 KE---IILVSIGNPNKPNKAVNQLAIWVDAKQKKQKLFDILRSQNHFKPPAVVYVSSRVG 232
Query: 292 MGFRLKLFLEKFWIKSAVLNAELPQNSRLHILEEFNAGLFDYLIATDV 339
+K+ ++ E P R ++ F G L++T V
Sbjct: 233 ADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGV 280
>AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=468
Length = 468
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 154/382 (40%), Gaps = 65/382 (17%)
Query: 2 AEQTTGETAPKQTVNEYEEEIDDQSFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILE 61
+ GE K V I F D L P L+RA++ G E P+ +Q P +
Sbjct: 28 GNKVNGEAVKKGYVG-----IHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAIL 82
Query: 62 GKDVVARAKTGSGKTFAYLLPLLQKLFTGSEDRKKLAPNAFVLVPTRELSQQVYSEVL-- 119
G DV+ +AK+G GKT ++L LQ++ + +A VL TREL+ Q+ +E +
Sbjct: 83 GMDVICQAKSGMGKTAVFVLSTLQQI-----EPSPGQVSALVLCHTRELAYQICNEFVRF 137
Query: 120 -SLIEICKVQLKV----VQLNSNMLNNDLQATLAGPPDVLISTPACVAKCLSGGVLQAAS 174
+ + KV + ++++ ++L N+ P +++ TP V L +
Sbjct: 138 STYLPDTKVSVFYGGVNIKIHKDLLKNEC-------PHIVVGTPGRVLALAREKDLSLKN 190
Query: 175 INASLETLVLDEADLLL-SYGYEEDINALTPHVPRSCQCLLMSATSSADVDKLKKLILHN 233
+ +LDE D +L S D+ + P Q ++ SAT S ++ + K + +
Sbjct: 191 V----RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQD 246
Query: 234 PF------VLTLPEVG----------NHKDDI---IPKNVQQFWISCPASDKLL------ 268
+ L VG H+ + +P N+ I KL
Sbjct: 247 GLRTLSGDSVALWWVGFGSGYCVFPRFHRARMGLNVPSNIDPMEIYVDDEAKLTLHGLVQ 306
Query: 269 -YI----------LALLKNGLVHKKVLIFTNTIDMGFRLKLFLEKFWIKSAVLNAELPQN 317
YI L L + L +V+IF ++ L L + S +++ + Q
Sbjct: 307 HYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQE 366
Query: 318 SRLHILEEFNAGLFDYLIATDV 339
RL + F G L+ATD+
Sbjct: 367 ERLTRYKSFKEGHKRILVATDL 388
>AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=486
Length = 486
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 29/230 (12%)
Query: 2 AEQTTGETAPKQTVNEYEEEIDDQSFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILE 61
+ GE K V I F D L P L+RA++ G E P+ +Q P +
Sbjct: 28 GNKVNGEAVKKGYVG-----IHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAIL 82
Query: 62 GKDVVARAKTGSGKTFAYLLPLLQKLFTGSEDRKKLAPNAFVLVPTRELSQQVYSEVL-- 119
G DV+ +AK+G GKT ++L LQ++ + +A VL TREL+ Q+ +E +
Sbjct: 83 GMDVICQAKSGMGKTAVFVLSTLQQI-----EPSPGQVSALVLCHTRELAYQICNEFVRF 137
Query: 120 -SLIEICKVQLKV----VQLNSNMLNNDLQATLAGPPDVLISTPACVAKCLSGGVLQAAS 174
+ + KV + ++++ ++L N+ P +++ TP V L +
Sbjct: 138 STYLPDTKVSVFYGGVNIKIHKDLLKNEC-------PHIVVGTPGRVLALAREKDLSLKN 190
Query: 175 INASLETLVLDEADLLL-SYGYEEDINALTPHVPRSCQCLLMSATSSADV 223
+ +LDE D +L S D+ + P Q ++ SAT S ++
Sbjct: 191 VRH----FILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEI 236
>AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:22090369-22092885 REVERSE LENGTH=581
Length = 581
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 16/184 (8%)
Query: 26 SFEDLGLDPRLVRALLKKGIEKPTPIQRVAFPLILEGKDVVARAKTGSGKTFAYLLPLLQ 85
S++ LGL + AL G ++P+ Q V P IL GKDV+ A+TGSGKT YL P++
Sbjct: 81 SWKSLGLSDNVSIALRDSGFDRPSLTQAVCIPSILSGKDVIVAAETGSGKTHGYLAPIID 140
Query: 86 KL--------FTGSEDRKKLAPN-AFVLVPTRELSQQVYSEVLSLI-EICKVQLKVVQLN 135
+L T E+R N + +L P L +QV V L+ E L+V +
Sbjct: 141 QLTNTALDSEVTNREERPFPLKNISLILCPNVMLCEQVVRMVNGLVDEDGNPLLRVEAVC 200
Query: 136 SNMLNNDLQATLAGPPDVLISTPACVAKCLSGGVLQAASINASLETLVLDEADLLLSYGY 195
+ Q PD+++STPA + + + ++ +V DEAD+LL +
Sbjct: 201 GS------QGWPDRLPDIIVSTPAALLNNIEPKRNRRLEFLRCVKYVVFDEADMLLCGSF 254
Query: 196 EEDI 199
+ I
Sbjct: 255 QNQI 258
>AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6461444-6463687
FORWARD LENGTH=472
Length = 472
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 25/195 (12%)
Query: 13 QTVNEYEEEIDDQSFEDL-----------GLDP-RLVRALLKKGIEKPTPIQRVAFPLIL 60
Q V E EI+ S + G P ++ + + G PT IQR A P +
Sbjct: 52 QAVAETSSEIESNSVTETTVPLTLRQICQGFVPEHILHRMEEIGFVFPTDIQREALPTLF 111
Query: 61 EGKDVVARAKTGSGKTFAYLLPLLQKLFTGSEDRKKLAPNAFVLVPTRELSQQVYSEVLS 120
G+D + A+TGSGKT YLL + + + ++ + A ++VPTREL QV
Sbjct: 112 TGRDCILHAQTGSGKTLTYLLLIFSLI-----NPQRSSVQAVIVVPTRELGMQVTKVARM 166
Query: 121 LIEICKVQLK----VVQLNSNMLNNDLQATLAGPPDVLISTPACVAKCLSGGVLQAASIN 176
L ++ +K + L+ L A PP +L++T A + L + + S+
Sbjct: 167 LAAKSEIDVKGCTVMALLDGGTLRRHKSWLKAEPPAILVATVASLCHMLEKHIFRIDSVR 226
Query: 177 ASLETLVLDEADLLL 191
LV+DE D L
Sbjct: 227 V----LVVDEVDFLF 237
>AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3554272-3556646 FORWARD LENGTH=344
Length = 344
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 129/291 (44%), Gaps = 43/291 (14%)
Query: 64 DVVARAKTGSGKTFAYLLPLLQKLFTGSEDRKKLAP---NAFVLVPTRELSQQVYSEVL- 119
DV+ +AK+G GKT ++L LQ++ + +P +A VL TREL+ Q+ +E +
Sbjct: 2 DVICQAKSGMGKTAVFVLSTLQQI--------EPSPGQVSALVLCHTRELAYQICNEFVR 53
Query: 120 --SLIEICKVQLKV----VQLNSNMLNNDLQATLAGPPDVLISTPACVAKCLSGGVLQAA 173
+ + KV + ++++ ++L N+ P +++ TP G VL A
Sbjct: 54 FSTYLPDTKVSVFYGGVNIKIHKDLLKNEC-------PHIVVGTP--------GRVLALA 98
Query: 174 SIN----ASLETLVLDEADLLL-SYGYEEDINALTPHVPRSCQCLLMSATSSADVDKLKK 228
++ +LDE D +L S D+ + P Q ++ SAT S ++ + K
Sbjct: 99 REKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCK 158
Query: 229 LILHNPFVLTLPEVGNHKDDIIPKNVQQFWISCPASDKLLYILALLKNGLVHKKVLIFTN 288
+ +P + + + + + Q +I +K + LL + L +V+IF
Sbjct: 159 KFMQDPMEIYVDDEAK----LTLHGLVQHYIKLSEMEKNRKLNDLL-DALDFNQVVIFVK 213
Query: 289 TIDMGFRLKLFLEKFWIKSAVLNAELPQNSRLHILEEFNAGLFDYLIATDV 339
++ L L + S +++ + Q RL + F G L+ATD+
Sbjct: 214 SVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDL 264