Miyakogusa Predicted Gene

Lj5g3v1496770.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1496770.1 Non Chatacterized Hit- tr|K4AWV3|K4AWV3_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,41.67,0.000000000000001,PWWP DOMAIN-CONTAINING PROTEIN,NULL;
seg,NULL,CUFF.55354.1
         (650 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G27650.1 | Symbols:  | Tudor/PWWP/MBT superfamily protein | c...   241   9e-64
AT3G05430.1 | Symbols:  | Tudor/PWWP/MBT superfamily protein | c...   181   2e-45
AT1G48560.2 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...    52   1e-06
AT1G48560.1 | Symbols:  | unknown protein; Has 75 Blast hits to ...    52   1e-06

>AT5G27650.1 | Symbols:  | Tudor/PWWP/MBT superfamily protein |
            chr5:9785511-9789094 FORWARD LENGTH=1072
          Length = 1072

 Score =  241 bits (616), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 186/488 (38%), Positives = 258/488 (52%), Gaps = 73/488 (14%)

Query: 183  ELPQLFVELQALALDPFHSVKRGIPAVTQQFFLRFRSLVYQKSLVLSPSTENEAPEVRPS 242
            ++PQL   LQ L+LDPFH +        ++FFLRFRSL YQKSL +S             
Sbjct: 638  DVPQLLSHLQDLSLDPFHGLSVASFGTARKFFLRFRSLNYQKSLSVS------------- 684

Query: 243  KSTSSFGESDSPNDRARASPLVKAVKHIVRADDPTRVGRKRAPSDRQEEY-TAKRLKKIQ 301
                    SD+  + AR +   K VK + R +DP++ G+KR  SDRQ+E  +AK+LKK  
Sbjct: 685  -------SSDATVENARDTKPSKPVKTVKRTEDPSKAGKKRLSSDRQDEIPSAKKLKKTN 737

Query: 302  DIKSLAAEKKAGSQKTSEARQGEGKDSM--IQAPPKLVKPNLTR-----KVERPAKPLEP 354
             +KS+A+EKK            E KDS+  I+ P ++V+    R     K     K +EP
Sbjct: 738  QLKSMASEKKIIR---------EAKDSIKPIREPSRVVQAKPARGQTGKKTAPSVKVVEP 788

Query: 355  TVLLIKFPPGTSLPSVAELKARFARFGPIDQSSLRVFWKSSSCRVIFIHRVDSKTAYKHA 414
            T+L++KFPPGTSLPS A LKARF RFG +DQS++RVFWKSS+CRV+F+++ D++TA+++A
Sbjct: 789  TMLVMKFPPGTSLPSAALLKARFGRFGLLDQSAIRVFWKSSTCRVVFLYKADAQTAFRYA 848

Query: 415  VSNQSLFGNVAVRYFLRELGDSSLDVSEAAKGRGDGGTFETPQIKDPLVVPRQTSVSAQQ 474
              N +LFGNV V+YFLR++     +  E    + D    + PQ +       Q     Q 
Sbjct: 849  TGNNTLFGNVNVKYFLRDVDAPKAEPREPENTKED----DEPQSQ----WLDQAPPLHQP 900

Query: 475  PLPRPTVQLKSILKKSNGDELFQGTGNGGSSKGTPRVKFMLGDEE-SNRGEQIMVSNSNN 533
             LP P V LKS LKK   D+    + NG  ++   RVKFMLG EE S++        +  
Sbjct: 901  TLPPPNVNLKSCLKKPV-DDPSSSSNNGNGNRAAVRVKFMLGGEENSSKANTEPPQVTMT 959

Query: 534  LDNASFPDGCAHSPVAMNFNSNNDQKVISQQ------SLPILPFPTQFTKTPQHNLHNSE 587
            L+  S P   + S V M F S   Q V+  Q        PILP P Q+TK  Q  +   +
Sbjct: 960  LNRNSGPSSSSSS-VPMEFVSKKFQNVVHHQQLPPSTLPPILPLPPQYTKPQQLPIKPVD 1018

Query: 588  -----MAPRNTSNFINXXXXXXXXXXXXXXXXXXXXXXXRQMIVLLTRCHNIVLNLMGLL 642
                 M P  + NF                          QM+ LL++C+ +V N+ GLL
Sbjct: 1019 HVEPPMPP--SRNF------------RGPIPAVSAGDISHQMLNLLSKCNEVVANVTGLL 1064

Query: 643  GHVPYHPL 650
            G+VPYHPL
Sbjct: 1065 GYVPYHPL 1072


>AT3G05430.1 | Symbols:  | Tudor/PWWP/MBT superfamily protein |
           chr3:1567745-1571037 FORWARD LENGTH=965
          Length = 965

 Score =  181 bits (458), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/332 (37%), Positives = 180/332 (54%), Gaps = 52/332 (15%)

Query: 197 DP-FHSVKRGIPAVTQQFFLRFRSLVYQKSLVLSPSTENEAPEVRPSKSTSSFGESDSPN 255
           DP F S  R    V +QFF  FRS VYQKSL  SPS                        
Sbjct: 607 DPLFGSSDRSSFRVIRQFFFHFRSHVYQKSLATSPS------------------------ 642

Query: 256 DRARASPLVKAVKHIVRADDPTRVGRKRAPSDRQEEY-TAKRLKKIQDIKSLAAEKKA-- 312
               A+ L K+ K + RA++ ++ GR R  SD Q++  + K+LKK    K LA++KK   
Sbjct: 643 ----ATKLSKSAKTLCRANEQSKAGRNRISSDSQQDVPSTKKLKKTIQFKPLASDKKTNQ 698

Query: 313 -GSQKTSEARQGEGKDSM---IQAPPKLVKPNLTRKVERPAKPLEPTVLLIKFPPGTSLP 368
             ++++S A     +D     I A P +V+    +K    A  +EPT+L++ FPPG SLP
Sbjct: 699 DATKRSSLAPLNPVRDQCRVPINAKPAIVQQE--KKTGPSAMVVEPTMLVMMFPPGESLP 756

Query: 369 SVAELKARFARFGPIDQSSLRVFWKSSSCRVIFIHRVDSKTAYKHAVSNQSLFGNVAVRY 428
           S+  LKARF RFG +DQS++RV WKSS CRV F++++D++TA ++   ++SLFGNV V Y
Sbjct: 757 SIDLLKARFGRFGQLDQSAIRVSWKSSICRVGFLYKLDAQTALRYVSGSKSLFGNVNVTY 816

Query: 429 FLRELGDSSLDVSEAAKGRGDGGTFETPQIKDPLVVPRQTSVSAQQPLPRPTVQLKSILK 488
           FLR++  SS      A G  +    + P+   P+  P    +    P+ +P +QLKS LK
Sbjct: 817 FLRDMKASS------ASGDHELKKAKRPKTDKPITKPLNQLLEQAPPVHQPNIQLKSCLK 870

Query: 489 KSNGDELFQGTGNGGSSKGTPRVKFMLGDEES 520
           K        G    G+ + T RVKFMLG++E+
Sbjct: 871 KP-------GNNRNGNHR-TVRVKFMLGEKET 894


>AT1G48560.2 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN:
           cellular_component unknown; EXPRESSED IN: 12 plant
           structures; EXPRESSED DURING: 6 growth stages. |
           chr1:17952935-17955108 FORWARD LENGTH=662
          Length = 662

 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 3/134 (2%)

Query: 298 KKIQDIKSLAAEKKAGSQKTSEARQGEGKDSMIQAPPKLVKPNLTRKVERPAKPLEPTVL 357
           + + +++S+  ++KA   K S AR  + K    Q      K +L   + +  +   P  L
Sbjct: 477 RSVDNVRSIGVKRKASRDKAS-ARYSKRKKKAGQQSISTDK-SLNLHLMKDMRLANPKCL 534

Query: 358 LIKF-PPGTSLPSVAELKARFARFGPIDQSSLRVFWKSSSCRVIFIHRVDSKTAYKHAVS 416
            +KF      LPS AEL  RF+ FG ID S   V    SS +V+F+  +D+ TAY+ A S
Sbjct: 535 RMKFLCRHGDLPSKAELLKRFSVFGKIDASRTDVNPGESSAKVVFMQSIDAVTAYQFARS 594

Query: 417 NQSLFGNVAVRYFL 430
            +   G   V Y L
Sbjct: 595 KKFRLGKSKVTYRL 608


>AT1G48560.1 | Symbols:  | unknown protein; Has 75 Blast hits to 71
           proteins in 10 species: Archae - 0; Bacteria - 0;
           Metazoa - 4; Fungi - 0; Plants - 69; Viruses - 0; Other
           Eukaryotes - 2 (source: NCBI BLink). |
           chr1:17952935-17955108 FORWARD LENGTH=643
          Length = 643

 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 3/134 (2%)

Query: 298 KKIQDIKSLAAEKKAGSQKTSEARQGEGKDSMIQAPPKLVKPNLTRKVERPAKPLEPTVL 357
           + + +++S+  ++KA   K S AR  + K    Q      K +L   + +  +   P  L
Sbjct: 458 RSVDNVRSIGVKRKASRDKAS-ARYSKRKKKAGQQSISTDK-SLNLHLMKDMRLANPKCL 515

Query: 358 LIKF-PPGTSLPSVAELKARFARFGPIDQSSLRVFWKSSSCRVIFIHRVDSKTAYKHAVS 416
            +KF      LPS AEL  RF+ FG ID S   V    SS +V+F+  +D+ TAY+ A S
Sbjct: 516 RMKFLCRHGDLPSKAELLKRFSVFGKIDASRTDVNPGESSAKVVFMQSIDAVTAYQFARS 575

Query: 417 NQSLFGNVAVRYFL 430
            +   G   V Y L
Sbjct: 576 KKFRLGKSKVTYRL 589