Miyakogusa Predicted Gene

Lj5g3v1495700.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1495700.1 tr|B9IMB0|B9IMB0_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_578714 PE=4
SV=1,71.81,0,ADXRDTASE,NULL; SUBFAMILY NOT NAMED,NULL; ELECTRON
TRANSFER FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE,N,CUFF.55312.1
         (435 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G30720.1 | Symbols:  | FAD/NAD(P)-binding oxidoreductase fami...   530   e-151

>AT4G30720.1 | Symbols:  | FAD/NAD(P)-binding oxidoreductase family
           protein | chr4:14972212-14975461 REVERSE LENGTH=707
          Length = 707

 Score =  530 bits (1364), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 265/404 (65%), Positives = 319/404 (78%), Gaps = 11/404 (2%)

Query: 38  ICCAKRTGKQRYPSEXXXXXXXXXQALQPSSDDNSKFEGTWRLSNLAVPLTQDPGKDSLE 97
           +C AKRTGK+RYPSE         +A+   +   +K EG WRLS L VP+  DPGKD L 
Sbjct: 40  LCAAKRTGKRRYPSERRKLRTEQKEAV---AKVKNKLEGVWRLSKLGVPVGDDPGKDFLG 96

Query: 98  VSDGLLQEIAKVIEFPVASLLPREAFSVVRKSFDARKKLKEPKFVHTVDMDVQKLLDLEP 157
           +S+GLLQ IAKVIEFPVAS+LP EAFSV+RKSFDARK LKE KFV+TVD+DV+ LL+LEP
Sbjct: 97  ISEGLLQAIAKVIEFPVASMLPEEAFSVIRKSFDARKILKEAKFVYTVDLDVKTLLELEP 156

Query: 158 RSWDFISRLEPKVGLVEHVLERKDI-GDLMSIIHDCKENKEDVVNGENGHSIFS-----R 211
           R+ DFI RLEPK+GL+EHV   K + GDL+S+++DCK    +  +GE    I +      
Sbjct: 157 RAHDFIFRLEPKIGLIEHVPTEKSVSGDLISVVNDCKRINSETASGEYEPQIINGSGDPH 216

Query: 212 ELNGNRAARKPKIAVVGSGPSGLFAALVLAELGADVTVIERGQPVEKRGRDIGALVVRRI 271
              G R+  KPKIAVVG GPSGLFAALVLAE GADVT+IERGQ VE+RGRDIGALVVR+I
Sbjct: 217 HHGGGRS--KPKIAVVGGGPSGLFAALVLAEFGADVTLIERGQAVEERGRDIGALVVRKI 274

Query: 272 LELESNFCFGEGGAGTWSDGKLVTRIGRNSGSVLAVMRTLVQFGAPKQILIDGKPHLGTD 331
           L++ESNFCFGEGGAGTWSDGKLVTRIG+NS +VLAV++TLV+FGAP  IL++GKPHLGTD
Sbjct: 275 LDMESNFCFGEGGAGTWSDGKLVTRIGKNSATVLAVLKTLVRFGAPDNILVNGKPHLGTD 334

Query: 332 RLVPLLRNFRRHLQDLDVAIKFGTRVDDLVINDGHVLGVMASESTDQSRLRSQKMEFDAV 391
           +LVPLLRNFR +LQ   V IKFGTRVDDL++ D  V+GV  S+ST+Q +  SQ ++ DAV
Sbjct: 335 KLVPLLRNFRHYLQSAGVTIKFGTRVDDLLVEDSRVVGVRVSDSTNQLQTTSQNLKVDAV 394

Query: 392 ILAVGHSARDMYQTLLTHNVELVPKDFAVGFRIEHPQELINSMQ 435
           +LAVGHSARD Y+ L + NVEL+PKDFAVG RIEHPQELINS+Q
Sbjct: 395 VLAVGHSARDTYEMLHSRNVELIPKDFAVGLRIEHPQELINSIQ 438