Miyakogusa Predicted Gene

Lj5g3v1452280.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1452280.1 NODE_31828_length_1309_cov_22.862490.path2.1
         (242 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G72210.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...   243   1e-64
AT1G22490.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...   231   4e-61
AT4G01460.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...   185   2e-47
AT5G46690.1 | Symbols: bHLH071 | beta HLH protein 71 | chr5:1894...   177   8e-45
AT5G65320.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...   171   4e-43
AT2G46810.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...   170   6e-43
AT3G24140.1 | Symbols: FMA | basic helix-loop-helix (bHLH) DNA-b...   164   7e-41
AT3G61950.2 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...   162   2e-40
AT3G61950.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...   162   2e-40
AT3G06120.1 | Symbols: MUTE | basic helix-loop-helix (bHLH) DNA-...   118   3e-27
AT5G53210.1 | Symbols: SPCH | basic helix-loop-helix (bHLH) DNA-...    96   3e-20
AT5G57150.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...    55   5e-08
AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel...    54   8e-08
AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel...    54   8e-08
AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel...    54   8e-08
AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |...    54   9e-08
AT5G57150.2 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...    54   9e-08
AT5G57150.3 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...    54   1e-07
AT1G01260.3 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...    54   1e-07
AT1G01260.2 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...    54   1e-07
AT1G01260.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...    54   1e-07
AT1G12860.1 | Symbols: SCRM2, ICE2 | basic helix-loop-helix (bHL...    53   1e-07
AT5G57150.4 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...    52   4e-07
AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type tran...    52   4e-07
AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH) DNA-b...    51   6e-07
AT4G17880.1 | Symbols:  | Basic helix-loop-helix (bHLH) DNA-bind...    49   2e-06
AT5G46760.1 | Symbols:  | Basic helix-loop-helix (bHLH) DNA-bind...    48   5e-06

>AT1G72210.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr1:27180066-27182268 FORWARD
           LENGTH=320
          Length = 320

 Score =  243 bits (619), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 126/213 (59%), Positives = 160/213 (75%), Gaps = 19/213 (8%)

Query: 35  NKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQ 94
           NKEEIENQRMTHIAVERNRRKQMNEYL+VLRSLMP  Y QRGDQASI+GGAIN+++ELE 
Sbjct: 116 NKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELEH 175

Query: 95  RLQFL----GAKKESEGKSENE----AATASMPFSEFFSFPQYSTSASGCDDSAAIGEHV 146
            LQ +        E  G   ++    +A++S PFS+FF+FPQYS   +    SAA  E  
Sbjct: 176 HLQSMEPPVKTATEDTGAGHDQTKTTSASSSGPFSDFFAFPQYSNRPT----SAAAAE-- 229

Query: 147 GGVQSGIADIEVTMVESHANLKIRSKKRPKQLLKMVTGLHTMRLTILHMNVTTTGEIVLY 206
                G+A+IEVTMVESHA+LKI +KKRP+QLLK+V+ + ++RLT+LH+NVTT  + VLY
Sbjct: 230 -----GMAEIEVTMVESHASLKILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTRDDSVLY 284

Query: 207 CLSVKVEEDCKLGSVDDIAAAVYQMLDRIHQEA 239
            +SVKVEE  +L +V+DIAAAV Q+L RI +E+
Sbjct: 285 SISVKVEEGSQLNTVEDIAAAVNQILRRIEEES 317


>AT1G22490.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr1:7938448-7940489 REVERSE
           LENGTH=304
          Length = 304

 Score =  231 bits (588), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 118/208 (56%), Positives = 155/208 (74%), Gaps = 12/208 (5%)

Query: 35  NKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQ 94
           NKEEIENQRMTHIAVERNRRKQMNEYL+VLRSLMP SY QRGDQASI+GGAIN+V+ELE 
Sbjct: 106 NKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEH 165

Query: 95  RLQFLGAKK-ESEGKSENEAATASM--PFSEFFSFPQYSTSASGCDDSAAIGEHVGGVQS 151
            LQ +  K+  +     ++ +T+S+  PF++FFSFPQYST +S     ++          
Sbjct: 166 ILQSMEPKRTRTHDPKGDKTSTSSLVGPFTDFFSFPQYSTKSSSDVPESSSSP------- 218

Query: 152 GIADIEVTMVESHANLKIRSKKRPKQLLKMVTGLHTMRLTILHMNVTTTGEIVLYCLSVK 211
             A+IEVT+ ESHAN+KI +KK+P+QLLK++T L ++RLT+LH+NVTT    +LY +SV+
Sbjct: 219 --AEIEVTVAESHANIKIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILYSISVR 276

Query: 212 VEEDCKLGSVDDIAAAVYQMLDRIHQEA 239
           VEE  +L +VDDIA A+ Q + RI +E 
Sbjct: 277 VEEGSQLNTVDDIATALNQTIRRIQEET 304


>AT4G01460.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr4:621334-622697 FORWARD
           LENGTH=315
          Length = 315

 Score =  185 bits (470), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 94/208 (45%), Positives = 142/208 (68%), Gaps = 3/208 (1%)

Query: 35  NKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQ 94
           NK+E+ENQRMTHIAVERNRR+QMNE+L+ LRSLMP S++QRGDQASI+GGAI+F++ELEQ
Sbjct: 106 NKDEVENQRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKELEQ 165

Query: 95  RLQFLGAKKESEGKSENEAATASMPFSEFFSFPQYSTSASGCDDSAAIGEHVGGVQSGIA 154
            LQ L A+K  +G  E    TAS   S   +    S S+             GG      
Sbjct: 166 LLQSLEAEKRKDGTDET-PKTASCSSSSSLACTNSSISSVSTTSENGFTARFGG--GDTT 222

Query: 155 DIEVTMVESHANLKIRSKKRPKQLLKMVTGLHTMRLTILHMNVTTTGEIVLYCLSVKVEE 214
           ++E T++++H +LK+R K+  +Q+LK +  +  ++L ILH+ ++++ + V+Y  ++K+E+
Sbjct: 223 EVEATVIQNHVSLKVRCKRGKRQILKAIVSIEELKLAILHLTISSSFDFVIYSFNLKMED 282

Query: 215 DCKLGSVDDIAAAVYQMLDRIHQEAMLN 242
            CKLGS D+IA AV+Q+ ++I+ E M +
Sbjct: 283 GCKLGSADEIATAVHQIFEQINGEVMWS 310


>AT5G46690.1 | Symbols: bHLH071 | beta HLH protein 71 |
           chr5:18945639-18947434 FORWARD LENGTH=327
          Length = 327

 Score =  177 bits (448), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 104/233 (44%), Positives = 146/233 (62%), Gaps = 34/233 (14%)

Query: 35  NKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQ 94
           N+EE ENQRMTHIAVERNRR+QMN++LSVLRSLMP+ +  +GDQASI+GGAI+F++ELE 
Sbjct: 79  NEEEAENQRMTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELEH 138

Query: 95  RLQFLGAKK----------------ESEGKSENEAATASMPFSEFFSFPQYSTSASGCDD 138
           +L  L A+K                +S G+ EN    +S+  S+FF    Y  S    + 
Sbjct: 139 KLLSLEAQKHHNAKLNQSVTSSTSQDSNGEQENPHQPSSLSLSQFF-LHSYDPSQENRNG 197

Query: 139 SAAIGEHVGGVQSGIADIEVTMVESHANLKIRSKKR-----------PKQLLKMVTGLHT 187
           S +       V++ + D+EVT++E+HAN++I S++R           P QL K+V  L +
Sbjct: 198 STS------SVKTPMEDLEVTLIETHANIRILSRRRGFRWSTLATTKPPQLSKLVASLQS 251

Query: 188 MRLTILHMNVTTTGEIVLYCLSVKVEEDCKLGSVDDIAAAVYQMLDRIHQEAM 240
           + L+ILH++VTT     +Y +S KVEE C+L SVDDIA AV+ ML  I +E  
Sbjct: 252 LSLSILHLSVTTLDNYAIYSISAKVEESCQLSSVDDIAGAVHHMLSIIEEEPF 304


>AT5G65320.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr5:26107368-26108640 REVERSE
           LENGTH=296
          Length = 296

 Score =  171 bits (433), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 91/203 (44%), Positives = 140/203 (68%), Gaps = 9/203 (4%)

Query: 40  ENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFL 99
           ENQRM HIAVERNRRKQMN +LS+L+S+MP SY Q  DQASII G I+++++LEQRLQ L
Sbjct: 98  ENQRMNHIAVERNRRKQMNHFLSILKSMMPLSYSQPNDQASIIEGTISYLKKLEQRLQSL 157

Query: 100 GAKKESEGKSENEAATASMPFSEFFSFPQYSTSASGCDDSAAIGEHVGGVQSG---IADI 156
            A+ ++   +++        FS+FF FPQYST+ +    +A+              +AD+
Sbjct: 158 EAQLKATKLNQSPNI-----FSDFFMFPQYSTATATATATASSSSSSHHHHKRLEVVADV 212

Query: 157 EVTMVESHANLKIRSKKRPKQLLKMVTGLHTMRLTILHMNVTTTGEIVLYCLSVKVEEDC 216
           EVTMVE HAN+K+ +K +P+ L K++   +++ L+ LH+N+TT+ ++ L+  SVKVE DC
Sbjct: 213 EVTMVERHANIKVLTKTQPRLLFKIINEFNSLGLSTLHLNLTTSKDMSLFTFSVKVEADC 272

Query: 217 KLG-SVDDIAAAVYQMLDRIHQE 238
           +L  S +++A  V++++ R+H+E
Sbjct: 273 QLTPSGNEVANTVHEVVRRVHKE 295


>AT2G46810.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr2:19239694-19242373 FORWARD
           LENGTH=371
          Length = 371

 Score =  170 bits (431), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 93/200 (46%), Positives = 130/200 (65%), Gaps = 14/200 (7%)

Query: 35  NKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQ 94
           N EEIE+QRMTHIAVERNRR+QMN +L+ LRS++P SYIQRGDQASI+GGAI+FV+ LEQ
Sbjct: 184 NIEEIESQRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQ 243

Query: 95  RLQFLGAKKESEGKSENEAATASMPFSEFFSFPQYSTSASGCDDSAAIGEHVGGVQSGIA 154
           +LQ L A+K S+   +N+         E  S    S++     +           QS   
Sbjct: 244 QLQSLEAQKRSQQSDDNKEQ-----IPEDNSLRNISSNKLRASNKEE--------QSSKL 290

Query: 155 DIEVTMVESHANLKIRSKKRPKQLLKMVTGLHTMRLTILHMNVTT-TGEIVLYCLSVKVE 213
            IE T++ESH NLKI+  ++  QLL+ +  L  +R T+LH+N+T+ T   V Y  ++K+E
Sbjct: 291 KIEATVIESHVNLKIQCTRKQGQLLRSIILLEKLRFTVLHLNITSPTNTSVSYSFNLKME 350

Query: 214 EDCKLGSVDDIAAAVYQMLD 233
           ++C LGS D+I AA+ Q+ D
Sbjct: 351 DECNLGSADEITAAIRQIFD 370


>AT3G24140.1 | Symbols: FMA | basic helix-loop-helix (bHLH)
           DNA-binding superfamily protein | chr3:8715525-8717772
           REVERSE LENGTH=414
          Length = 414

 Score =  164 bits (414), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 94/209 (44%), Positives = 128/209 (61%), Gaps = 10/209 (4%)

Query: 37  EEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRL 96
           EE+E+QRMTHIAVERNRRKQMNE+L VLRSLMP SY+QRGDQASIIGGAI FVRELEQ L
Sbjct: 190 EEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLL 249

Query: 97  QFLGAKKESEGKSENEAATASMPFSEFFSFPQYSTSASGCDDSAAIGEHVGGV------- 149
           Q L ++K      E      +   S        +  A     +  + E  GG        
Sbjct: 250 QCLESQKRRRILGETGRDMTTTTTSSSSPITTVANQAQPLIITGNVTELEGGGGLREETA 309

Query: 150 --QSGIADIEVTMVESHANLKIRSKKRPKQLLKMVTGLHTMRLTILHMNVTTTGEIVLYC 207
             +S +AD+EV ++   A +KI S++RP QL+K +  L  + L+ILH N+TT  + VLY 
Sbjct: 310 ENKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLHLSILHTNITTMEQTVLYS 369

Query: 208 LSVKVEEDCKLGSVDDIAAAVYQMLDRIH 236
            +VK+  + +  + +DIA+++ Q+   IH
Sbjct: 370 FNVKITSETRF-TAEDIASSIQQIFSFIH 397


>AT3G61950.2 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr3:22940231-22941332 FORWARD
           LENGTH=307
          Length = 307

 Score =  162 bits (410), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 86/200 (43%), Positives = 135/200 (67%), Gaps = 15/200 (7%)

Query: 35  NKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQ 94
           N EEIENQR+ HIAVERNRR+QMNE+++ LR+L+P SYIQRGDQASI+GGAIN+V+ LEQ
Sbjct: 118 NNEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQ 177

Query: 95  RLQFLGAKKESEGKSENEAATASMPFSEFFSFPQYSTSASGCDDSAAIGEHVGGVQSGIA 154
            +Q L ++K ++ +S +E    ++          + +  S  D    + +     Q+ I 
Sbjct: 178 IIQSLESQKRTQQQSNSEVVENAL---------NHLSGISSNDLWTTLED-----QTCIP 223

Query: 155 DIEVTMVESHANLKIRSKKRPKQLLKMVTGLHTMRLTILHMNVTT-TGEIVLYCLSVKVE 213
            IE T++++H +LK++ +K+  QLLK +  L  ++LT+LH+N+TT +   V Y  ++K+E
Sbjct: 224 KIEATVIQNHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHLNITTSSHSSVSYSFNLKME 283

Query: 214 EDCKLGSVDDIAAAVYQMLD 233
           ++C L S D+I AAV+++ D
Sbjct: 284 DECDLESADEITAAVHRIFD 303


>AT3G61950.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr3:22939661-22941332 FORWARD
           LENGTH=358
          Length = 358

 Score =  162 bits (409), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 86/200 (43%), Positives = 135/200 (67%), Gaps = 15/200 (7%)

Query: 35  NKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQ 94
           N EEIENQR+ HIAVERNRR+QMNE+++ LR+L+P SYIQRGDQASI+GGAIN+V+ LEQ
Sbjct: 169 NNEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQ 228

Query: 95  RLQFLGAKKESEGKSENEAATASMPFSEFFSFPQYSTSASGCDDSAAIGEHVGGVQSGIA 154
            +Q L ++K ++ +S +E    ++          + +  S  D    + +     Q+ I 
Sbjct: 229 IIQSLESQKRTQQQSNSEVVENAL---------NHLSGISSNDLWTTLED-----QTCIP 274

Query: 155 DIEVTMVESHANLKIRSKKRPKQLLKMVTGLHTMRLTILHMNVTT-TGEIVLYCLSVKVE 213
            IE T++++H +LK++ +K+  QLLK +  L  ++LT+LH+N+TT +   V Y  ++K+E
Sbjct: 275 KIEATVIQNHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHLNITTSSHSSVSYSFNLKME 334

Query: 214 EDCKLGSVDDIAAAVYQMLD 233
           ++C L S D+I AAV+++ D
Sbjct: 335 DECDLESADEITAAVHRIFD 354


>AT3G06120.1 | Symbols: MUTE | basic helix-loop-helix (bHLH)
           DNA-binding superfamily protein | chr3:1846531-1848016
           FORWARD LENGTH=202
          Length = 202

 Score =  118 bits (296), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 72/192 (37%), Positives = 105/192 (54%), Gaps = 28/192 (14%)

Query: 44  MTHIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFLGAKK 103
           M+HIAVERNRR+QMNE+L  LRSL P  YI+RGDQASIIGG I F++EL+Q +Q L +KK
Sbjct: 1   MSHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKK 60

Query: 104 ESEG--------------KSENEAATASMPFSEFFSFPQYST--SASGCDDSAAIGEHVG 147
             +                S   AAT  +PFS   +    ST      C +S        
Sbjct: 61  RRKTLNRPSFPYDHQTIEPSSLGAATTRVPFSRIENVMTTSTFKEVGACCNSPH------ 114

Query: 148 GVQSGIADIEVTMVESHANLKIRSKKRPKQLLKMVTGLHTMRLTILHMNVTTTGEIVLYC 207
                 A++E  +  S+  L++ S++   QL+K+++ L  +   +LH+N+++  E VLY 
Sbjct: 115 ------ANVEAKISGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYF 168

Query: 208 LSVKVEEDCKLG 219
             VK+  +C L 
Sbjct: 169 FVVKIGLECHLS 180


>AT5G53210.1 | Symbols: SPCH | basic helix-loop-helix (bHLH)
           DNA-binding superfamily protein | chr5:21586606-21588941
           REVERSE LENGTH=364
          Length = 364

 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 57/69 (82%)

Query: 42  QRMTHIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFLGA 101
           Q+M+H+ VERNRRKQMNE+L+VLRSLMP  Y++RGDQASIIGG + ++ EL+Q LQ L A
Sbjct: 100 QKMSHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLEA 159

Query: 102 KKESEGKSE 110
           KK+ +  +E
Sbjct: 160 KKQRKTYAE 168



 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 54/93 (58%), Gaps = 1/93 (1%)

Query: 138 DSAAIGEHVGGVQSGIADIEVTMVESHANLKIRSKKRPKQLLKMVTGLHTMRLTILHMNV 197
           +S+ I E V   +S +AD+EV    ++  LK  S K P Q++K++  L  + L IL +N+
Sbjct: 270 ESSVINELVANSKSALADVEVKFSGANVLLKTVSHKIPGQVMKIIAALEDLALEILQVNI 329

Query: 198 TTTGEIVLYCLSVKVEEDCKLGSVDDIAAAVYQ 230
            T  E +L   ++K+  +C+L S +++A  + Q
Sbjct: 330 NTVDETMLNSFTIKIGIECQL-SAEELAQQIQQ 361


>AT5G57150.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr5:23152361-23154872 FORWARD
           LENGTH=247
          Length = 247

 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 17/175 (9%)

Query: 46  HIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFLGAKKES 105
           +I  ERNRR+++N+ L  LRS++P   I + D+ASII  AI+++    + LQ+   K E+
Sbjct: 55  NIVSERNRRQKLNQRLFALRSVVPN--ITKMDKASIIKDAISYI----EGLQYEEKKLEA 108

Query: 106 EGKSENEAATASMPFSEFFS----FPQYSTSASGCDDSAAIGEHVGGVQSGIADIEVT-M 160
           E +       +S+ FS+ F      P  S      D     G     ++  + +++VT M
Sbjct: 109 EIRELESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDS----GSSTSLIE--VLELKVTFM 162

Query: 161 VESHANLKIRSKKRPKQLLKMVTGLHTMRLTILHMNVTTTGEIVLYCLSVKVEED 215
            E    + +   KR   ++K+     ++ L IL  N+T+   ++ + + ++ +E+
Sbjct: 163 GERTMVVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEADEE 217


>AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
           (bHLH) DNA-binding superfamily protein |
           chr3:9832953-9834790 REVERSE LENGTH=494
          Length = 494

 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 14/188 (7%)

Query: 46  HIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFLGAKKES 105
           ++  ER RRK++N+ L +LRS++P+  I + D+ASI+G AI++++EL QR+  L    E 
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKELLQRINDL--HNEL 363

Query: 106 EGKSENEAATASMPFSEFFSFPQYSTSASGCDDSAAIGEHVGGVQSGIADIEVTMVESHA 165
           E          S  F      PQ  +     +   +      G Q   A +EV + E  A
Sbjct: 364 ESTPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQ---ARVEVRLREGRA 420

Query: 166 -NLKIRSKKRPKQLLKMVTGLHTMRLTILHMNVTTTGEIVLYCLSVKVEEDCKLGS---V 221
            N+ +   +RP  LL  +  L  + L +    ++       + L V   E C+ G     
Sbjct: 421 VNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNG---FALDVFRAEQCQEGQEILP 477

Query: 222 DDIAAAVY 229
           D I A ++
Sbjct: 478 DQIKAVLF 485


>AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
           (bHLH) DNA-binding superfamily protein |
           chr3:9832953-9834790 REVERSE LENGTH=494
          Length = 494

 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 14/188 (7%)

Query: 46  HIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFLGAKKES 105
           ++  ER RRK++N+ L +LRS++P+  I + D+ASI+G AI++++EL QR+  L    E 
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKELLQRINDL--HNEL 363

Query: 106 EGKSENEAATASMPFSEFFSFPQYSTSASGCDDSAAIGEHVGGVQSGIADIEVTMVESHA 165
           E          S  F      PQ  +     +   +      G Q   A +EV + E  A
Sbjct: 364 ESTPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQ---ARVEVRLREGRA 420

Query: 166 -NLKIRSKKRPKQLLKMVTGLHTMRLTILHMNVTTTGEIVLYCLSVKVEEDCKLGS---V 221
            N+ +   +RP  LL  +  L  + L +    ++       + L V   E C+ G     
Sbjct: 421 VNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNG---FALDVFRAEQCQEGQEILP 477

Query: 222 DDIAAAVY 229
           D I A ++
Sbjct: 478 DQIKAVLF 485


>AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
           (bHLH) DNA-binding superfamily protein |
           chr3:9832953-9834790 REVERSE LENGTH=494
          Length = 494

 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 14/188 (7%)

Query: 46  HIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFLGAKKES 105
           ++  ER RRK++N+ L +LRS++P+  I + D+ASI+G AI++++EL QR+  L    E 
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKELLQRINDL--HNEL 363

Query: 106 EGKSENEAATASMPFSEFFSFPQYSTSASGCDDSAAIGEHVGGVQSGIADIEVTMVESHA 165
           E          S  F      PQ  +     +   +      G Q   A +EV + E  A
Sbjct: 364 ESTPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQ---ARVEVRLREGRA 420

Query: 166 -NLKIRSKKRPKQLLKMVTGLHTMRLTILHMNVTTTGEIVLYCLSVKVEEDCKLGS---V 221
            N+ +   +RP  LL  +  L  + L +    ++       + L V   E C+ G     
Sbjct: 421 VNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNG---FALDVFRAEQCQEGQEILP 477

Query: 222 DDIAAAVY 229
           D I A ++
Sbjct: 478 DQIKAVLF 485


>AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |
           Basic helix-loop-helix (bHLH) DNA-binding family protein
           | chr1:11799042-11800913 REVERSE LENGTH=623
          Length = 623

 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 89/170 (52%), Gaps = 17/170 (10%)

Query: 44  MTHIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFLGAKK 103
           + H+  ER RR+++N+    LR+++P   + + D+AS++G AI ++ EL+ ++     K 
Sbjct: 451 LNHVEAERQRREKLNQRFYALRAVVPN--VSKMDKASLLGDAIAYINELKSKV----VKT 504

Query: 104 ESEG-KSENEAATASMPFSEFFSFPQYSTSASGCDDSAAIGEHVGGVQSGIADIEVTMVE 162
           ESE  + +N+     +  +          SASG D S++       ++    +IEV ++ 
Sbjct: 505 ESEKLQIKNQLEEVKLELA------GRKASASGGDMSSSCSS----IKPVGMEIEVKIIG 554

Query: 163 SHANLKIRSKKRPKQLLKMVTGLHTMRLTILHMNVTTTGEIVLYCLSVKV 212
             A +++ S KR     ++++ L  + L + H +++   ++++   +VK+
Sbjct: 555 WDAMIRVESSKRNHPAARLMSALMDLELEVNHASMSVVNDLMIQQATVKM 604


>AT5G57150.2 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr5:23152361-23153293 FORWARD
           LENGTH=226
          Length = 226

 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 86/172 (50%), Gaps = 17/172 (9%)

Query: 46  HIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFLGAKKES 105
           +I  ERNRR+++N+ L  LRS++P   I + D+ASII  AI+++    + LQ+   K E+
Sbjct: 56  NIVSERNRRQKLNQRLFALRSVVPN--ITKMDKASIIKDAISYI----EGLQYEEKKLEA 109

Query: 106 EGKSENEAATASMPFSEFFS----FPQYSTSASGCDDSAAIGEHVGGVQSGIADIEVT-M 160
           E +       +S+ FS+ F      P  S      D     G     ++  + +++VT M
Sbjct: 110 EIRELESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDS----GSSTSLIE--VLELKVTFM 163

Query: 161 VESHANLKIRSKKRPKQLLKMVTGLHTMRLTILHMNVTTTGEIVLYCLSVKV 212
            E    + +   KR   ++K+     ++ L IL  N+T+   ++ + + ++V
Sbjct: 164 GERTMVVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEV 215


>AT5G57150.3 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr5:23152361-23154556 FORWARD
           LENGTH=219
          Length = 219

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 86/172 (50%), Gaps = 17/172 (9%)

Query: 46  HIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFLGAKKES 105
           +I  ERNRR+++N+ L  LRS++P   I + D+ASII  AI+++    + LQ+   K E+
Sbjct: 56  NIVSERNRRQKLNQRLFALRSVVPN--ITKMDKASIIKDAISYI----EGLQYEEKKLEA 109

Query: 106 EGKSENEAATASMPFSEFFS----FPQYSTSASGCDDSAAIGEHVGGVQSGIADIEVT-M 160
           E +       +S+ FS+ F      P  S      D     G     ++  + +++VT M
Sbjct: 110 EIRELESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDS----GSSTSLIE--VLELKVTFM 163

Query: 161 VESHANLKIRSKKRPKQLLKMVTGLHTMRLTILHMNVTTTGEIVLYCLSVKV 212
            E    + +   KR   ++K+     ++ L IL  N+T+   ++ + + +++
Sbjct: 164 GERTMVVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEI 215


>AT1G01260.3 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr1:109595-111367 FORWARD
           LENGTH=590
          Length = 590

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 45/68 (66%), Gaps = 2/68 (2%)

Query: 44  MTHIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFLGAKK 103
           + H+  ER RR+++N+    LRS++P   I + D+AS++G A++++ EL  +L+ + A++
Sbjct: 432 LNHVEAERQRREKLNQRFYALRSVVPN--ISKMDKASLLGDAVSYINELHAKLKVMEAER 489

Query: 104 ESEGKSEN 111
           E  G S N
Sbjct: 490 ERLGYSSN 497


>AT1G01260.2 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr1:109595-111367 FORWARD
           LENGTH=590
          Length = 590

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 45/68 (66%), Gaps = 2/68 (2%)

Query: 44  MTHIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFLGAKK 103
           + H+  ER RR+++N+    LRS++P   I + D+AS++G A++++ EL  +L+ + A++
Sbjct: 432 LNHVEAERQRREKLNQRFYALRSVVPN--ISKMDKASLLGDAVSYINELHAKLKVMEAER 489

Query: 104 ESEGKSEN 111
           E  G S N
Sbjct: 490 ERLGYSSN 497


>AT1G01260.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr1:109595-111367 FORWARD
           LENGTH=590
          Length = 590

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 45/68 (66%), Gaps = 2/68 (2%)

Query: 44  MTHIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFLGAKK 103
           + H+  ER RR+++N+    LRS++P   I + D+AS++G A++++ EL  +L+ + A++
Sbjct: 432 LNHVEAERQRREKLNQRFYALRSVVPN--ISKMDKASLLGDAVSYINELHAKLKVMEAER 489

Query: 104 ESEGKSEN 111
           E  G S N
Sbjct: 490 ERLGYSSN 497


>AT1G12860.1 | Symbols: SCRM2, ICE2 | basic helix-loop-helix (bHLH)
           DNA-binding superfamily protein | chr1:4384758-4386392
           FORWARD LENGTH=450
          Length = 450

 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 12/148 (8%)

Query: 46  HIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFLGAKKES 105
           ++  ER RRK++N+ L +LRS++P+  I + D+ASI+G AI++++EL QR+  L  + ES
Sbjct: 268 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKELLQRINDLHTELES 325

Query: 106 EGKSENEAATASMPFSEFFSFPQYSTSASGCDDSAAIGEHVGGVQSGIADIEVTMVESHA 165
              S    +++  P +       Y      C  S+       G Q     +EV + E  A
Sbjct: 326 TPPS----SSSLHPLTPTPQTLSYRVKEELCPSSSLPSPK--GQQ---PRVEVRLREGKA 376

Query: 166 -NLKIRSKKRPKQLLKMVTGLHTMRLTI 192
            N+ +   +RP  LL  +  L  + L +
Sbjct: 377 VNIHMFCGRRPGLLLSTMRALDNLGLDV 404


>AT5G57150.4 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr5:23152361-23154801 FORWARD
           LENGTH=264
          Length = 264

 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 86/172 (50%), Gaps = 17/172 (9%)

Query: 46  HIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFLGAKKES 105
           +I  ERNRR+++N+ L  LRS++P   I + D+ASII  AI+++    + LQ+   K E+
Sbjct: 56  NIVSERNRRQKLNQRLFALRSVVPN--ITKMDKASIIKDAISYI----EGLQYEEKKLEA 109

Query: 106 EGKSENEAATASMPFSEFFS----FPQYSTSASGCDDSAAIGEHVGGVQSGIADIEVT-M 160
           E +       +S+ FS+ F      P  S      D     G     ++  + +++VT M
Sbjct: 110 EIRELESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDS----GSSTSLIE--VLELKVTFM 163

Query: 161 VESHANLKIRSKKRPKQLLKMVTGLHTMRLTILHMNVTTTGEIVLYCLSVKV 212
            E    + +   KR   ++K+     ++ L IL  N+T+   ++ + + +++
Sbjct: 164 GERTMVVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEL 215


>AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type
           transcription factor | chr2:19091187-19092887 REVERSE
           LENGTH=566
          Length = 566

 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 51/75 (68%), Gaps = 2/75 (2%)

Query: 44  MTHIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFLGAKK 103
           + H+  ER RR+++N+    LRS++P   I + D+AS++G AI++++EL+++++ +  ++
Sbjct: 394 LNHVEAERQRREKLNQRFYALRSVVPN--ISKMDKASLLGDAISYIKELQEKVKIMEDER 451

Query: 104 ESEGKSENEAATASM 118
               KS +E+ T ++
Sbjct: 452 VGTDKSLSESNTITV 466


>AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH)
           DNA-binding superfamily protein | chr2:7331721-7334077
           FORWARD LENGTH=571
          Length = 571

 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 44/66 (66%), Gaps = 2/66 (3%)

Query: 46  HIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFLGAKKES 105
           ++  ER RRK++N+ L  LRSL+P   I + D+ASI+G AIN+V+EL+   + L  + E 
Sbjct: 315 NLMAERRRRKKLNDRLYALRSLVPR--ITKLDRASILGDAINYVKELQNEAKELQDELEE 372

Query: 106 EGKSEN 111
             ++E+
Sbjct: 373 NSETED 378


>AT4G17880.1 | Symbols:  | Basic helix-loop-helix (bHLH) DNA-binding
           family protein | chr4:9933702-9935471 REVERSE LENGTH=589
          Length = 589

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 83/173 (47%), Gaps = 24/173 (13%)

Query: 44  MTHIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFLGAKK 103
           + H+  ER RR+++N+    LR+++P   + + D+AS++G AI+++ EL+ +LQ   + K
Sbjct: 415 LNHVEAERQRREKLNQRFYSLRAVVPN--VSKMDKASLLGDAISYISELKSKLQKAESDK 472

Query: 104 ESEGKS----ENEAATASMPFSEFFSFPQYSTSASGCDDSAAIGEHVGGVQSGIADIEVT 159
           E   K       EA  A     +     Q         +S+ + E          +++V 
Sbjct: 473 EELQKQIDVMNKEAGNAKSSVKDRKCLNQ---------ESSVLIE---------MEVDVK 514

Query: 160 MVESHANLKIRSKKRPKQLLKMVTGLHTMRLTILHMNVTTTGEIVLYCLSVKV 212
           ++   A ++I+  KR     K +  L  + L + H +++   ++++   +VK+
Sbjct: 515 IIGWDAMIRIQCSKRNHPGAKFMEALKELDLEVNHASLSVVNDLMIQQATVKM 567


>AT5G46760.1 | Symbols:  | Basic helix-loop-helix (bHLH) DNA-binding
           family protein | chr5:18974231-18976009 FORWARD
           LENGTH=592
          Length = 592

 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 41/61 (67%), Gaps = 2/61 (3%)

Query: 44  MTHIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFLGAKK 103
           + H+  ER RR+++N+    LR+++P   + + D+AS++G AI+++ EL+ +LQ   + K
Sbjct: 414 LNHVEAERQRREKLNQRFYSLRAVVPN--VSKMDKASLLGDAISYINELKSKLQQAESDK 471

Query: 104 E 104
           E
Sbjct: 472 E 472