Miyakogusa Predicted Gene

Lj5g3v1440060.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1440060.1 Non Chatacterized Hit- tr|I3S0F2|I3S0F2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,97.12,0,no
description,Signal transduction histidine kinase, phosphotransfer
(Hpt) domain; Hpt,Signal transd,CUFF.55254.1
         (151 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G21510.1 | Symbols: AHP1 | histidine-containing phosphotransm...   165   9e-42
AT5G39340.1 | Symbols: AHP3, ATHP2 | histidine-containing phosph...   152   6e-38
AT3G29350.1 | Symbols: AHP2 | histidine-containing phosphotransm...   152   7e-38
AT1G03430.1 | Symbols: AHP5 | histidine-containing phosphotransf...   152   1e-37
AT3G16360.2 | Symbols: AHP4 | HPT phosphotransmitter 4 | chr3:55...   140   3e-34
AT3G29350.2 | Symbols: AHP2 | histidine-containing phosphotransm...   129   7e-31
AT3G16360.1 | Symbols: AHP4 | HPT phosphotransmitter 4 | chr3:55...   129   8e-31
AT1G80100.1 | Symbols: AHP6, HP6 | histidine phosphotransfer pro...    89   1e-18
AT1G80100.2 | Symbols: AHP6, HP6 | histidine phosphotransfer pro...    75   2e-14
AT4G04402.1 | Symbols:  | two-component phosphorelay mediator, p...    67   6e-12

>AT3G21510.1 | Symbols: AHP1 | histidine-containing
           phosphotransmitter 1 | chr3:7578432-7579537 REVERSE
           LENGTH=154
          Length = 154

 Score =  165 bits (418), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 85/135 (62%), Positives = 111/135 (82%)

Query: 5   IIQLQRHLVDYTASLFDEGFLDEQFNQLELLQDESNPDFVVEVVTLFFQDAERLLDELTK 64
           ++Q Q+ L DYT SLF EG LD QF QL+ LQDESNPDFV +VVTLFFQD++R+L++L+ 
Sbjct: 3   LVQKQKSLQDYTKSLFLEGILDSQFLQLQQLQDESNPDFVSQVVTLFFQDSDRILNDLSL 62

Query: 65  ALGQASIDFKKLDAHVHQLKGSSSSVGAQRVHKACISFRNSCEEKNIEGCLKSLQQVRHE 124
           +L Q  +DFKK+D HVHQLKGSSSS+GAQRV  AC+ FR+ CE++N+E C + LQQV+ E
Sbjct: 63  SLDQQVVDFKKVDPHVHQLKGSSSSIGAQRVKNACVVFRSFCEQQNVEACHRCLQQVKQE 122

Query: 125 YSLVKSKLETLFKVK 139
           Y LVK++LETLFK++
Sbjct: 123 YYLVKNRLETLFKLE 137


>AT5G39340.1 | Symbols: AHP3, ATHP2 | histidine-containing
           phosphotransmitter 3 | chr5:15748941-15750248 FORWARD
           LENGTH=155
          Length = 155

 Score =  152 bits (385), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 74/140 (52%), Positives = 103/140 (73%), Gaps = 1/140 (0%)

Query: 1   MDGGIIQLQRHLVDYTASLFDEGFLDEQFNQLELLQDESNPDFVVEVVTLFFQDAERLLD 60
           MD  I QLQR   D+T SL+ +GFLD+QF +L+ LQDE +PDFV EVVTLFF+D E+L+ 
Sbjct: 1   MDTLIAQLQRRFCDFTISLYHQGFLDDQFTELKKLQDECSPDFVAEVVTLFFEDCEKLIS 60

Query: 61  ELTKALGQ-ASIDFKKLDAHVHQLKGSSSSVGAQRVHKACISFRNSCEEKNIEGCLKSLQ 119
            + +AL Q  ++DFK + + VHQLKGSSSSVGA+RV   C++ +  C+ +N EGC++ LQ
Sbjct: 61  NMARALDQTGNVDFKLVGSSVHQLKGSSSSVGAKRVKGLCVTLKECCDSQNYEGCVRCLQ 120

Query: 120 QVRHEYSLVKSKLETLFKVK 139
           QV  EY  +K+KL+ LF ++
Sbjct: 121 QVDIEYKTLKAKLQDLFNLE 140


>AT3G29350.1 | Symbols: AHP2 | histidine-containing
           phosphotransmitter 2 | chr3:11264379-11265408 REVERSE
           LENGTH=156
          Length = 156

 Score =  152 bits (385), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 73/140 (52%), Positives = 102/140 (72%), Gaps = 1/140 (0%)

Query: 1   MDGGIIQLQRHLVDYTASLFDEGFLDEQFNQLELLQDESNPDFVVEVVTLFFQDAERLLD 60
           MD  I QLQR   DYT SL+ +GFLD+QF +L+ LQD+ +PDFV EV++LFF+D  +L+ 
Sbjct: 1   MDALIAQLQRQFRDYTISLYQQGFLDDQFTELKKLQDDGSPDFVSEVLSLFFEDCVKLIS 60

Query: 61  ELTKAL-GQASIDFKKLDAHVHQLKGSSSSVGAQRVHKACISFRNSCEEKNIEGCLKSLQ 119
            + +AL    ++DF ++ A VHQLKGSSSSVGA+RV   C+SF+  CE KN EGC++ LQ
Sbjct: 61  NMARALDTTGTVDFSQVGASVHQLKGSSSSVGAKRVKTLCVSFKECCEAKNYEGCVRCLQ 120

Query: 120 QVRHEYSLVKSKLETLFKVK 139
           QV  EY  +K+KL+ +F ++
Sbjct: 121 QVDIEYKALKTKLQDMFNLE 140


>AT1G03430.1 | Symbols: AHP5 | histidine-containing phosphotransfer
           factor 5 | chr1:848159-849235 FORWARD LENGTH=157
          Length = 157

 Score =  152 bits (383), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 72/136 (52%), Positives = 102/136 (75%), Gaps = 1/136 (0%)

Query: 5   IIQLQRHLVDYTASLFDEGFLDEQFNQLELLQDESNPDFVVEVVTLFFQDAERLLDELTK 64
           + QLQR   DY  SL+ +GFLD QF++L  LQDE  PDFV EVV+LFF D  +L++ ++ 
Sbjct: 6   VAQLQRQFQDYIVSLYQQGFLDNQFSELRKLQDEGTPDFVAEVVSLFFDDCSKLINTMSI 65

Query: 65  ALGQA-SIDFKKLDAHVHQLKGSSSSVGAQRVHKACISFRNSCEEKNIEGCLKSLQQVRH 123
           +L +  ++DFK++D+ VHQLKGSSSSVGA+RV   CISF+  C+ +N EGCL+ LQQV +
Sbjct: 66  SLERPDNVDFKQVDSGVHQLKGSSSSVGARRVKNVCISFKECCDVQNREGCLRCLQQVDY 125

Query: 124 EYSLVKSKLETLFKVK 139
           EY ++K+KL+ LF ++
Sbjct: 126 EYKMLKTKLQDLFNLE 141


>AT3G16360.2 | Symbols: AHP4 | HPT phosphotransmitter 4 |
           chr3:5554351-5555518 FORWARD LENGTH=145
          Length = 145

 Score =  140 bits (353), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 63/136 (46%), Positives = 96/136 (70%)

Query: 8   LQRHLVDYTASLFDEGFLDEQFNQLELLQDESNPDFVVEVVTLFFQDAERLLDELTKALG 67
           +QR +     SLFD+G+LDEQF +LE LQD++NP+FV EV  L+F+D+ RL++ + +AL 
Sbjct: 1   MQRQVALIKQSLFDQGYLDEQFMELEELQDDANPNFVEEVSALYFKDSARLINNIDQALE 60

Query: 68  QASIDFKKLDAHVHQLKGSSSSVGAQRVHKACISFRNSCEEKNIEGCLKSLQQVRHEYSL 127
           + S DF +LD+++HQ KGSS+S+GA +V   C +FR  C   N EGCL++ QQ++ E+S 
Sbjct: 61  RGSFDFNRLDSYMHQFKGSSTSIGASKVKAECTTFREYCRAGNAEGCLRTFQQLKKEHST 120

Query: 128 VKSKLETLFKVKGICG 143
           ++ KLE  F++    G
Sbjct: 121 LRKKLEHYFQLARQAG 136


>AT3G29350.2 | Symbols: AHP2 | histidine-containing
           phosphotransmitter 2 | chr3:11264682-11265408 REVERSE
           LENGTH=114
          Length = 114

 Score =  129 bits (324), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 62/114 (54%), Positives = 83/114 (72%), Gaps = 1/114 (0%)

Query: 1   MDGGIIQLQRHLVDYTASLFDEGFLDEQFNQLELLQDESNPDFVVEVVTLFFQDAERLLD 60
           MD  I QLQR   DYT SL+ +GFLD+QF +L+ LQD+ +PDFV EV++LFF+D  +L+ 
Sbjct: 1   MDALIAQLQRQFRDYTISLYQQGFLDDQFTELKKLQDDGSPDFVSEVLSLFFEDCVKLIS 60

Query: 61  ELTKAL-GQASIDFKKLDAHVHQLKGSSSSVGAQRVHKACISFRNSCEEKNIEG 113
            + +AL    ++DF ++ A VHQLKGSSSSVGA+RV   C+SF+  CE KN EG
Sbjct: 61  NMARALDTTGTVDFSQVGASVHQLKGSSSSVGAKRVKTLCVSFKECCEAKNYEG 114


>AT3G16360.1 | Symbols: AHP4 | HPT phosphotransmitter 4 |
           chr3:5554484-5555367 FORWARD LENGTH=127
          Length = 127

 Score =  129 bits (324), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 56/117 (47%), Positives = 86/117 (73%)

Query: 22  EGFLDEQFNQLELLQDESNPDFVVEVVTLFFQDAERLLDELTKALGQASIDFKKLDAHVH 81
           +G+LDEQF +LE LQD++NP+FV EV  L+F+D+ RL++ + +AL + S DF +LD+++H
Sbjct: 9   QGYLDEQFMELEELQDDANPNFVEEVSALYFKDSARLINNIDQALERGSFDFNRLDSYMH 68

Query: 82  QLKGSSSSVGAQRVHKACISFRNSCEEKNIEGCLKSLQQVRHEYSLVKSKLETLFKV 138
           Q KGSS+S+GA +V   C +FR  C   N EGCL++ QQ++ E+S ++ KLE  F+ 
Sbjct: 69  QFKGSSTSIGASKVKAECTTFREYCRAGNAEGCLRTFQQLKKEHSTLRKKLEHYFQA 125


>AT1G80100.1 | Symbols: AHP6, HP6 | histidine phosphotransfer
           protein 6 | chr1:30133818-30134652 FORWARD LENGTH=154
          Length = 154

 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/137 (43%), Positives = 94/137 (68%), Gaps = 1/137 (0%)

Query: 4   GIIQLQRHLVDYTASLFDEGFLDEQFNQLELLQDESNPDFVVEVVTLFFQDAERLLDELT 63
           G+ +LQ  +    ASLF +G LDEQF QL+ LQDE++P+FV +V+ ++F ++E+LL  L 
Sbjct: 5   GVDRLQADINRLLASLFHQGVLDEQFLQLQQLQDETSPNFVYDVINIYFDESEKLLRNLR 64

Query: 64  KA-LGQASIDFKKLDAHVHQLKGSSSSVGAQRVHKACISFRNSCEEKNIEGCLKSLQQVR 122
              + +   D+KK+  H++QL GSSSS+GA+RV   C++FR++ E  N  GCL+ L+ V 
Sbjct: 65  LLLMDREFSDYKKIGLHLNQLVGSSSSIGARRVRNVCVAFRSASELSNRPGCLRGLEVVE 124

Query: 123 HEYSLVKSKLETLFKVK 139
           HEY  +K+ +  LF+++
Sbjct: 125 HEYHYLKNMMHELFQLE 141


>AT1G80100.2 | Symbols: AHP6, HP6 | histidine phosphotransfer
           protein 6 | chr1:30133818-30134652 FORWARD LENGTH=132
          Length = 132

 Score = 74.7 bits (182), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/136 (39%), Positives = 83/136 (61%), Gaps = 21/136 (15%)

Query: 4   GIIQLQRHLVDYTASLFDEGFLDEQFNQLELLQDESNPDFVVEVVTLFFQDAERLLDELT 63
           G+ +LQ  +    ASLF +G LDEQF QL+ LQDE++P+FV++              E +
Sbjct: 5   GVDRLQADINRLLASLFHQGVLDEQFLQLQQLQDETSPNFVMD-------------REFS 51

Query: 64  KALGQASIDFKKLDAHVHQLKGSSSSVGAQRVHKACISFRNSCEEKNIEGCLKSLQQVRH 123
                   D+KK+  H++QL GSSSS+GA+RV   C++FR++ E  N  GCL+ L+ V H
Sbjct: 52  --------DYKKIGLHLNQLVGSSSSIGARRVRNVCVAFRSASELSNRPGCLRGLEVVEH 103

Query: 124 EYSLVKSKLETLFKVK 139
           EY  +K+ +  LF+++
Sbjct: 104 EYHYLKNMMHELFQLE 119


>AT4G04402.1 | Symbols:  | two-component phosphorelay mediator,
           putative | chr4:2164007-2165404 FORWARD LENGTH=167
          Length = 167

 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 75/130 (57%), Gaps = 15/130 (11%)

Query: 23  GFLDEQFNQLELLQDESNPDFVVEVVTLFFQDAERLLDELTKALGQA--SIDFKKLDAHV 80
           GFLD+QF +L+ LQD+ +PDFV EV++LFF+D  +L+  + +AL ++  ++DF ++    
Sbjct: 24  GFLDDQFTELKKLQDDGSPDFVAEVLSLFFEDCVKLISNMARALDKSTGTVDFGQMKLFS 83

Query: 81  HQLKGSSSSVGAQRVHKACI-SFRNSCEEKNIEG----------CLKSLQQVRHEYSLVK 129
             L     +V  +R  K C+ + RN  + +  +G           L+ LQQV  EY  + 
Sbjct: 84  CTL--VFDTVLVRRGSKLCVLASRNIAKLRITKGKLVQHRLRTHRLRCLQQVDIEYKTLT 141

Query: 130 SKLETLFKVK 139
           +KL+ +F ++
Sbjct: 142 TKLQDMFNLE 151