Miyakogusa Predicted Gene

Lj5g3v1427760.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1427760.1 CUFF.55353.1
         (108 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G05030.1 | Symbols: NHX2, ATNHX2 | sodium hydrogen exchanger ...   110   3e-25
AT3G05030.2 | Symbols: NHX2, ATNHX2 | sodium hydrogen exchanger ...   109   3e-25
AT5G27150.1 | Symbols: NHX1, ATNHX, AT-NHX1, ATNHX1 | Na+/H+ exc...   108   7e-25
AT5G55470.1 | Symbols: ATNHX3, NHX3 | Na+/H+ (sodium hydrogen) e...    70   4e-13

>AT3G05030.1 | Symbols: NHX2, ATNHX2 | sodium hydrogen exchanger 2 |
           chr3:1393456-1396784 REVERSE LENGTH=546
          Length = 546

 Score =  110 bits (274), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 62/107 (57%), Positives = 75/107 (70%), Gaps = 5/107 (4%)

Query: 1   MLTKPLIRLLLPH--TDTKTDSMASLDPSTPKSFTVPLL-GSAQDSVGDFDAHE-IRRPS 56
           MLTKPLIR L+PH    T T SM S D STPKS  +PLL G   DS     +H+ + RP+
Sbjct: 435 MLTKPLIRYLMPHQKATTSTTSMLS-DDSTPKSIHIPLLDGEQLDSFELPGSHQDVPRPN 493

Query: 57  SIRALLSTPTHTVHRLWRKFDNSFMRPVFGGRGFVPVEPGSPSDRSN 103
           S+R  L  PT TVH  WR+FD++FMRPVFGGRGFVP  PGSP++RS+
Sbjct: 494 SLRGFLMRPTRTVHYYWRQFDDAFMRPVFGGRGFVPFVPGSPTERSS 540


>AT3G05030.2 | Symbols: NHX2, ATNHX2 | sodium hydrogen exchanger 2 |
           chr3:1393456-1395753 REVERSE LENGTH=421
          Length = 421

 Score =  109 bits (273), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 62/107 (57%), Positives = 75/107 (70%), Gaps = 5/107 (4%)

Query: 1   MLTKPLIRLLLPH--TDTKTDSMASLDPSTPKSFTVPLL-GSAQDSVGDFDAHE-IRRPS 56
           MLTKPLIR L+PH    T T SM S D STPKS  +PLL G   DS     +H+ + RP+
Sbjct: 310 MLTKPLIRYLMPHQKATTSTTSMLS-DDSTPKSIHIPLLDGEQLDSFELPGSHQDVPRPN 368

Query: 57  SIRALLSTPTHTVHRLWRKFDNSFMRPVFGGRGFVPVEPGSPSDRSN 103
           S+R  L  PT TVH  WR+FD++FMRPVFGGRGFVP  PGSP++RS+
Sbjct: 369 SLRGFLMRPTRTVHYYWRQFDDAFMRPVFGGRGFVPFVPGSPTERSS 415


>AT5G27150.1 | Symbols: NHX1, ATNHX, AT-NHX1, ATNHX1 | Na+/H+
           exchanger 1 | chr5:9554251-9557266 FORWARD LENGTH=538
          Length = 538

 Score =  108 bits (270), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 58/103 (56%), Positives = 71/103 (68%), Gaps = 5/103 (4%)

Query: 1   MLTKPLIRLLLPHTDTKTDSMASLDPSTPKSFTVPLLGSAQDSVGD-FDAHEIRRPSSIR 59
           MLTKPLI  LLPH +  T  ++  D +TPKS  +PLL   QDS  +    H + RP SIR
Sbjct: 433 MLTKPLISYLLPHQNATTSMLS--DDNTPKSIHIPLLD--QDSFIEPSGNHNVPRPDSIR 488

Query: 60  ALLSTPTHTVHRLWRKFDNSFMRPVFGGRGFVPVEPGSPSDRS 102
             L+ PT TVH  WR+FD+SFMRPVFGGRGFVP  PGSP++R+
Sbjct: 489 GFLTRPTRTVHYYWRQFDDSFMRPVFGGRGFVPFVPGSPTERN 531


>AT5G55470.1 | Symbols: ATNHX3, NHX3 | Na+/H+ (sodium hydrogen)
           exchanger 3 | chr5:22469553-22472585 REVERSE LENGTH=529
          Length = 529

 Score = 69.7 bits (169), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 7/89 (7%)

Query: 2   LTKPLIRLLLPH--TDTKTDSMASLDPSTPKS-FTVPLLGSAQDSVGDFDAHEIRRPSSI 58
           LTKPL+  LLP   +    +     +P +PK   T+PLL   + +  +F+    R   SI
Sbjct: 436 LTKPLVNYLLPQDASHNTGNRGKRTEPGSPKEDATLPLLSFDESASTNFN----RAKDSI 491

Query: 59  RALLSTPTHTVHRLWRKFDNSFMRPVFGG 87
             L+  P +T+HR WRKFD+++MRP+FGG
Sbjct: 492 SLLMEQPVYTIHRYWRKFDDTYMRPIFGG 520