Miyakogusa Predicted Gene

Lj5g3v1426470.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1426470.1 Non Chatacterized Hit- tr|I1KFF8|I1KFF8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.21048
PE,61.84,0.000000000000004, ,CUFF.55237.1
         (76 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G32520.1 | Symbols:  | alpha/beta-Hydrolases superfamily prot...    51   2e-07

>AT2G32520.1 | Symbols:  | alpha/beta-Hydrolases superfamily
          protein | chr2:13805823-13807442 REVERSE LENGTH=239
          Length = 239

 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 34/43 (79%), Gaps = 3/43 (6%)

Query: 34 ISDAAPFQKVQIPMVDIDTKFDAYVVGKHDAPGIIVLQDWLGV 76
          ++D+A F+K+QI     DT FDAYVVGK DAPGI+V+Q+W GV
Sbjct: 1  MADSA-FRKIQIQR--DDTTFDAYVVGKDDAPGIVVIQEWWGV 40