Miyakogusa Predicted Gene

Lj5g3v1381550.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1381550.1 Non Chatacterized Hit- tr|I1Q5S8|I1Q5S8_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,45.1,8e-19,TPX2,Xklp2 targeting protein; coiled-coil,NULL;
seg,NULL,CUFF.55219.1
         (262 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G04630.3 | Symbols: WDL1 | WVD2-like 1 | chr3:1259231-1260652...    87   1e-17
AT3G04630.2 | Symbols: WDL1 | WVD2-like 1 | chr3:1259231-1260652...    87   1e-17
AT3G04630.1 | Symbols: WDL1 | WVD2-like 1 | chr3:1259231-1260652...    87   1e-17
AT3G23090.2 | Symbols:  | TPX2 (targeting protein for Xklp2) pro...    74   8e-14
AT3G23090.1 | Symbols:  | TPX2 (targeting protein for Xklp2) pro...    74   8e-14
AT5G28646.2 | Symbols: WVD2 | TPX2 (targeting protein for Xklp2)...    71   7e-13
AT5G28646.1 | Symbols: WVD2 | TPX2 (targeting protein for Xklp2)...    71   7e-13
AT1G54460.1 | Symbols:  | TPX2 (targeting protein for Xklp2) pro...    70   1e-12

>AT3G04630.3 | Symbols: WDL1 | WVD2-like 1 | chr3:1259231-1260652
           FORWARD LENGTH=286
          Length = 286

 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 48/101 (47%), Positives = 61/101 (60%), Gaps = 1/101 (0%)

Query: 163 FSSSKPLQLDDKKNYDDEDNWSLASS-AFSMRTARSKVTQGSAPTFKCSARXXXXXXXXX 221
            +  KPLQ ++KK+ DDEDN S+ASS A SMR  +S +T GSAPTF+ + R         
Sbjct: 83  LAVRKPLQPENKKHIDDEDNCSIASSVATSMRMGKSGLTYGSAPTFRSAQRAEKRKEYYQ 142

Query: 222 XXXXXXXXXXXXXNQYEARQKEEQEAAIKQLRKNLVIRAKP 262
                        N+ E RQK+EQEAA+KQLRKNL  +AKP
Sbjct: 143 KLEEKNQALEAERNELEQRQKDEQEAALKQLRKNLKFKAKP 183


>AT3G04630.2 | Symbols: WDL1 | WVD2-like 1 | chr3:1259231-1260652
           FORWARD LENGTH=286
          Length = 286

 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 48/101 (47%), Positives = 61/101 (60%), Gaps = 1/101 (0%)

Query: 163 FSSSKPLQLDDKKNYDDEDNWSLASS-AFSMRTARSKVTQGSAPTFKCSARXXXXXXXXX 221
            +  KPLQ ++KK+ DDEDN S+ASS A SMR  +S +T GSAPTF+ + R         
Sbjct: 83  LAVRKPLQPENKKHIDDEDNCSIASSVATSMRMGKSGLTYGSAPTFRSAQRAEKRKEYYQ 142

Query: 222 XXXXXXXXXXXXXNQYEARQKEEQEAAIKQLRKNLVIRAKP 262
                        N+ E RQK+EQEAA+KQLRKNL  +AKP
Sbjct: 143 KLEEKNQALEAERNELEQRQKDEQEAALKQLRKNLKFKAKP 183


>AT3G04630.1 | Symbols: WDL1 | WVD2-like 1 | chr3:1259231-1260652
           FORWARD LENGTH=287
          Length = 287

 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 48/101 (47%), Positives = 61/101 (60%), Gaps = 1/101 (0%)

Query: 163 FSSSKPLQLDDKKNYDDEDNWSLASS-AFSMRTARSKVTQGSAPTFKCSARXXXXXXXXX 221
            +  KPLQ ++KK+ DDEDN S+ASS A SMR  +S +T GSAPTF+ + R         
Sbjct: 84  LAVRKPLQPENKKHIDDEDNCSIASSVATSMRMGKSGLTYGSAPTFRSAQRAEKRKEYYQ 143

Query: 222 XXXXXXXXXXXXXNQYEARQKEEQEAAIKQLRKNLVIRAKP 262
                        N+ E RQK+EQEAA+KQLRKNL  +AKP
Sbjct: 144 KLEEKNQALEAERNELEQRQKDEQEAALKQLRKNLKFKAKP 184


>AT3G23090.2 | Symbols:  | TPX2 (targeting protein for Xklp2)
           protein family | chr3:8214533-8216137 REVERSE LENGTH=338
          Length = 338

 Score = 74.3 bits (181), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 120/273 (43%), Gaps = 47/273 (17%)

Query: 11  VDKKPNGVIAASNGDS-------------------NDKAHISSKIAAVKAEAKDHEVKEC 51
           +DK+P+GV+  +NGDS                   +   H   +      E  +++VKEC
Sbjct: 1   MDKEPDGVVVYANGDSCNPNQENVSEPLLDSVSRDDANVHTELRYGEENIEVNEYDVKEC 60

Query: 52  TKDNDFVEKCHEKKDVLSAKTTNCNTDLPEKEIEKSEVQKLDDSKKLTSPAARKEHTNHS 111
           T +            +   K      D   K++ KS +     +K  +        T ++
Sbjct: 61  TSE------------IPVGKP--IGDDFESKDVTKSSLH----AKHASKSGRGNNKTRNT 102

Query: 112 VSQPSDLVTERQGSYTQIVDTKAV-ATGLNLSPNANSMQSPYSSKNSQPNTPFSSSKPLQ 170
           V QP  L TE++ S T+   ++++ + GL   P+ +S     ++K  +        KPLQ
Sbjct: 103 VPQPFSLATEKRASSTRSFTSESLESAGLKKFPDGHSKVQSQATKVPR--------KPLQ 154

Query: 171 LDDKKNYDDEDNWSLASSAFS-MRTARSKVTQGSAPTFKCSARXXXXXXXXXXXXXXXXX 229
             +KK  D+ED+ S+AS A S  ++A+S+    +AP+F+ + R                 
Sbjct: 155 PKNKKLSDEEDSCSVASYATSGAKSAKSRTVVTAAPSFRSTERAEKRKEFYTKLEEKHQA 214

Query: 230 XXXXXNQYEARQKEEQEAAIKQLRKNLVIRAKP 262
                 Q EAR KE  EAA++QLRK+L  +A P
Sbjct: 215 MEAEKTQSEARNKEATEAALRQLRKSLRFKANP 247


>AT3G23090.1 | Symbols:  | TPX2 (targeting protein for Xklp2)
           protein family | chr3:8214533-8216983 REVERSE LENGTH=338
          Length = 338

 Score = 74.3 bits (181), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 120/273 (43%), Gaps = 47/273 (17%)

Query: 11  VDKKPNGVIAASNGDS-------------------NDKAHISSKIAAVKAEAKDHEVKEC 51
           +DK+P+GV+  +NGDS                   +   H   +      E  +++VKEC
Sbjct: 5   MDKEPDGVVVYANGDSCNPNQENVSEPLLDSVSRDDANVHTELRYGEENIEVNEYDVKEC 64

Query: 52  TKDNDFVEKCHEKKDVLSAKTTNCNTDLPEKEIEKSEVQKLDDSKKLTSPAARKEHTNHS 111
           T +            +   K      D   K++ KS +     +K  +        T ++
Sbjct: 65  TSE------------IPVGKP--IGDDFESKDVTKSSLH----AKHASKSGRGNNKTRNT 106

Query: 112 VSQPSDLVTERQGSYTQIVDTKAV-ATGLNLSPNANSMQSPYSSKNSQPNTPFSSSKPLQ 170
           V QP  L TE++ S T+   ++++ + GL   P+ +S     ++K  +        KPLQ
Sbjct: 107 VPQPFSLATEKRASSTRSFTSESLESAGLKKFPDGHSKVQSQATKVPR--------KPLQ 158

Query: 171 LDDKKNYDDEDNWSLASSAFS-MRTARSKVTQGSAPTFKCSARXXXXXXXXXXXXXXXXX 229
             +KK  D+ED+ S+AS A S  ++A+S+    +AP+F+ + R                 
Sbjct: 159 PKNKKLSDEEDSCSVASYATSGAKSAKSRTVVTAAPSFRSTERAEKRKEFYTKLEEKHQA 218

Query: 230 XXXXXNQYEARQKEEQEAAIKQLRKNLVIRAKP 262
                 Q EAR KE  EAA++QLRK+L  +A P
Sbjct: 219 MEAEKTQSEARNKEATEAALRQLRKSLRFKANP 251


>AT5G28646.2 | Symbols: WVD2 | TPX2 (targeting protein for Xklp2)
           protein family | chr5:10675192-10676151 FORWARD
           LENGTH=202
          Length = 202

 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 51/89 (57%), Gaps = 3/89 (3%)

Query: 174 KKNYDDEDNWSLASSAFSMRTARSKVTQGSAPTFKCSARXXXXXXXXXXXXXXXXXXXXX 233
           KKN D+ED+ S+ASS   M+ A+SKVT G+AP F+ + R                     
Sbjct: 59  KKNLDEEDDCSVASS---MKNAKSKVTHGTAPRFRSAQRAEKRKEYYQKLEEKHQALEAE 115

Query: 234 XNQYEARQKEEQEAAIKQLRKNLVIRAKP 262
             + E RQKEEQEAAIKQLRKNL  +A P
Sbjct: 116 RIELEQRQKEEQEAAIKQLRKNLKFKANP 144


>AT5G28646.1 | Symbols: WVD2 | TPX2 (targeting protein for Xklp2)
           protein family | chr5:10675192-10676151 FORWARD
           LENGTH=202
          Length = 202

 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 51/89 (57%), Gaps = 3/89 (3%)

Query: 174 KKNYDDEDNWSLASSAFSMRTARSKVTQGSAPTFKCSARXXXXXXXXXXXXXXXXXXXXX 233
           KKN D+ED+ S+ASS   M+ A+SKVT G+AP F+ + R                     
Sbjct: 59  KKNLDEEDDCSVASS---MKNAKSKVTHGTAPRFRSAQRAEKRKEYYQKLEEKHQALEAE 115

Query: 234 XNQYEARQKEEQEAAIKQLRKNLVIRAKP 262
             + E RQKEEQEAAIKQLRKNL  +A P
Sbjct: 116 RIELEQRQKEEQEAAIKQLRKNLKFKANP 144


>AT1G54460.1 | Symbols:  | TPX2 (targeting protein for Xklp2)
           protein family | chr1:20340907-20342900 REVERSE
           LENGTH=338
          Length = 338

 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 121/264 (45%), Gaps = 44/264 (16%)

Query: 1   MGREVSETQVVDKKPNGVIAASNGDSNDKAHISSKIAAVKA-EAKDHEVKECTKDNDFVE 59
           MGRE+ +  + DKK N + A+S G S+D     +K+ +    EA   EVKECT+ N   +
Sbjct: 1   MGRELVDKHM-DKKANSLTASSTGSSDD-----NKVPSPSTNEAA--EVKECTEQNLVAD 52

Query: 60  KCHEKKDVLSAKTTNCNTDLPEKEIEKSEVQKLDDSKKLTSPAARKEHTNHSVSQPSDLV 119
               ++  +        T+ P     KS V+    +K              +V +P  L 
Sbjct: 53  DARLRQQGI--------TETPGSH--KSSVKPRVTAKT-------------TVPKPFSLS 89

Query: 120 TERQGSYTQIVDTKAVATGLNLSPNANSMQSPYSSKNSQPNTPFSSSKPLQLDDKKNYDD 179
            E+       VD  ++  G        S  S  +S+ SQ N+P  + +    D K ++D+
Sbjct: 90  AEK--PRRAAVDNNSLGNGA-------SHNSSSASRVSQLNSPLPTRR--IPDHKMHHDE 138

Query: 180 EDNWSLASS-AFSMRTARSKVTQGSAPTFKCSARXXXXXXXXXXXXXXXXXXXXXXNQYE 238
           ED++S+ASS A S+R+ + K+T G APTF  ++R                       + E
Sbjct: 139 EDSFSVASSSATSIRSFKPKITIGVAPTFSSTSRLERRREFYQKLEEKQKALEAEKRENE 198

Query: 239 ARQKEEQEAAIKQLRKNLVIRAKP 262
            R KEEQEA  KQLRKN+  +A P
Sbjct: 199 KRLKEEQEAVTKQLRKNMAYKANP 222