Miyakogusa Predicted Gene

Lj5g3v1359430.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1359430.1 tr|G7IR90|G7IR90_MEDTR Thymidylate kinase
OS=Medicago truncatula GN=MTR_2g084750 PE=3
SV=1,82.01,0,Thymidylate_kin,NULL; P-loop containing nucleoside
triphosphate hydrolases,NULL; THYMIDYLATE
KINASE,,NODE_61823_length_782_cov_90.118927.path1.1
         (234 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G59440.3 | Symbols: ZEU1 | P-loop containing nucleoside triph...   303   5e-83
AT5G59440.1 | Symbols: ZEU1, ATTMPK.1 | P-loop containing nucleo...   303   6e-83
AT5G59440.2 | Symbols: ZEU1, ATTMPK.2 | P-loop containing nucleo...   303   6e-83

>AT5G59440.3 | Symbols: ZEU1 | P-loop containing nucleoside
           triphosphate hydrolases superfamily protein |
           chr5:23971397-23972729 FORWARD LENGTH=271
          Length = 271

 Score =  303 bits (777), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 143/182 (78%), Positives = 161/182 (88%)

Query: 53  RGALVVLEGLDRSGKSSQCTRLVSYLEGQGINAELLRFPDRTTSVGQMISAYLTNTSQLD 112
           RGAL+VLEGLDRSGKS+QC +L+S+L G G   EL RFPDR TSVGQMISAYL+N SQLD
Sbjct: 66  RGALIVLEGLDRSGKSTQCAKLLSFLNGLGHPTELWRFPDRETSVGQMISAYLSNKSQLD 125

Query: 113 DHTIHLLFSANRWEKRSLMETKLKSGTTLIVDRYSYSGVAFSSAKGLNFEWCKAPEIGLL 172
           DHTIHLLFSANRWEKRSLME KLK+GTTLIVDRYSYSGVAFSSAKGL+ EWCKAPEIGLL
Sbjct: 126 DHTIHLLFSANRWEKRSLMEEKLKTGTTLIVDRYSYSGVAFSSAKGLDIEWCKAPEIGLL 185

Query: 173 APDLVAYLDISPEKAAERGGYGDERYEKLEFQKKVARSYKVLHDHSWKVVDACQPIEDVE 232
           APD V YLDISPE+AAERGGYGDERYE++EFQKKVA  Y+ L D SWK+++A   +E+VE
Sbjct: 186 APDSVLYLDISPERAAERGGYGDERYERVEFQKKVADFYQTLGDSSWKIINASDAMEEVE 245

Query: 233 KQ 234
           K+
Sbjct: 246 KK 247


>AT5G59440.1 | Symbols: ZEU1, ATTMPK.1 | P-loop containing
           nucleoside triphosphate hydrolases superfamily protein |
           chr5:23971533-23972729 FORWARD LENGTH=263
          Length = 263

 Score =  303 bits (777), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 143/182 (78%), Positives = 161/182 (88%)

Query: 53  RGALVVLEGLDRSGKSSQCTRLVSYLEGQGINAELLRFPDRTTSVGQMISAYLTNTSQLD 112
           RGAL+VLEGLDRSGKS+QC +L+S+L G G   EL RFPDR TSVGQMISAYL+N SQLD
Sbjct: 58  RGALIVLEGLDRSGKSTQCAKLLSFLNGLGHPTELWRFPDRETSVGQMISAYLSNKSQLD 117

Query: 113 DHTIHLLFSANRWEKRSLMETKLKSGTTLIVDRYSYSGVAFSSAKGLNFEWCKAPEIGLL 172
           DHTIHLLFSANRWEKRSLME KLK+GTTLIVDRYSYSGVAFSSAKGL+ EWCKAPEIGLL
Sbjct: 118 DHTIHLLFSANRWEKRSLMEEKLKTGTTLIVDRYSYSGVAFSSAKGLDIEWCKAPEIGLL 177

Query: 173 APDLVAYLDISPEKAAERGGYGDERYEKLEFQKKVARSYKVLHDHSWKVVDACQPIEDVE 232
           APD V YLDISPE+AAERGGYGDERYE++EFQKKVA  Y+ L D SWK+++A   +E+VE
Sbjct: 178 APDSVLYLDISPERAAERGGYGDERYERVEFQKKVADFYQTLGDSSWKIINASDAMEEVE 237

Query: 233 KQ 234
           K+
Sbjct: 238 KK 239


>AT5G59440.2 | Symbols: ZEU1, ATTMPK.2 | P-loop containing
           nucleoside triphosphate hydrolases superfamily protein |
           chr5:23971889-23972729 FORWARD LENGTH=224
          Length = 224

 Score =  303 bits (776), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 143/182 (78%), Positives = 161/182 (88%)

Query: 53  RGALVVLEGLDRSGKSSQCTRLVSYLEGQGINAELLRFPDRTTSVGQMISAYLTNTSQLD 112
           RGAL+VLEGLDRSGKS+QC +L+S+L G G   EL RFPDR TSVGQMISAYL+N SQLD
Sbjct: 19  RGALIVLEGLDRSGKSTQCAKLLSFLNGLGHPTELWRFPDRETSVGQMISAYLSNKSQLD 78

Query: 113 DHTIHLLFSANRWEKRSLMETKLKSGTTLIVDRYSYSGVAFSSAKGLNFEWCKAPEIGLL 172
           DHTIHLLFSANRWEKRSLME KLK+GTTLIVDRYSYSGVAFSSAKGL+ EWCKAPEIGLL
Sbjct: 79  DHTIHLLFSANRWEKRSLMEEKLKTGTTLIVDRYSYSGVAFSSAKGLDIEWCKAPEIGLL 138

Query: 173 APDLVAYLDISPEKAAERGGYGDERYEKLEFQKKVARSYKVLHDHSWKVVDACQPIEDVE 232
           APD V YLDISPE+AAERGGYGDERYE++EFQKKVA  Y+ L D SWK+++A   +E+VE
Sbjct: 139 APDSVLYLDISPERAAERGGYGDERYERVEFQKKVADFYQTLGDSSWKIINASDAMEEVE 198

Query: 233 KQ 234
           K+
Sbjct: 199 KK 200