Miyakogusa Predicted Gene
- Lj5g3v1358160.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1358160.2 Non Chatacterized Hit- tr|I1NIS8|I1NIS8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,82.85,0,HELICASE_ATP_BIND_1,Helicase, superfamily 1/2,
ATP-binding domain; HELICASE_CTER,Helicase, C-termina,CUFF.55193.2
(636 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside triph... 892 0.0
AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside triph... 892 0.0
AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside triph... 892 0.0
AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleosid... 833 0.0
AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 ... 253 4e-67
AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 | chr3:6652799-6... 241 1e-63
AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORW... 211 1e-54
AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 | chr5:25... 196 5e-50
AT5G19310.1 | Symbols: | Homeotic gene regulator | chr5:6498906... 173 3e-43
AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putat... 170 3e-42
AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putat... 169 4e-42
AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA ... 166 6e-41
AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic ac... 165 7e-41
AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 | chr2:91... 163 4e-40
AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 | chr... 149 6e-36
AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 147 2e-35
AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 147 2e-35
AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 147 2e-35
AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 | chr1:16... 146 4e-35
AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containi... 138 1e-32
AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 | chr2:8129... 128 1e-29
AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin re... 113 4e-25
AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 112 9e-25
AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 112 9e-25
AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 112 9e-25
AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 | chr2:5544... 110 2e-24
AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containi... 110 3e-24
AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 | c... 110 4e-24
AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 | c... 110 4e-24
AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator | chr3:... 106 4e-23
AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helic... 104 2e-22
AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 | chr3:88... 103 4e-22
AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helic... 103 4e-22
AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDD... 101 2e-21
AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 100 3e-21
AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 99 8e-21
AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 | c... 98 2e-20
AT5G20420.1 | Symbols: CHR42 | chromatin remodeling 42 | chr5:68... 97 3e-20
AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domai... 95 1e-19
AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosph... 95 2e-19
AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog | chr3:21... 94 2e-19
AT3G57300.2 | Symbols: INO80 | INO80 ortholog | chr3:21199612-21... 94 3e-19
AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containin... 89 8e-18
AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein | chr5:75... 89 9e-18
AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helic... 86 1e-16
AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helic... 80 4e-15
AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein / ... 80 5e-15
AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein / ... 80 6e-15
AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helic... 78 2e-14
AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helic... 78 2e-14
AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domai... 72 1e-12
AT5G05130.1 | Symbols: | DNA/RNA helicase protein | chr5:151217... 72 1e-12
AT1G48310.1 | Symbols: CHR18, CHA18 | chromatin remodeling facto... 72 1e-12
AT2G40770.1 | Symbols: | zinc ion binding;DNA binding;helicases... 65 1e-10
AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helic... 60 3e-09
AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helic... 59 1e-08
AT3G54460.1 | Symbols: | SNF2 domain-containing protein / helic... 52 1e-06
>AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 892 bits (2304), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/620 (71%), Positives = 502/620 (80%), Gaps = 23/620 (3%)
Query: 1 MGLGKTFQVIAFLYTAMRSVDLGLRTALIVTPVNVLHNWRREFIKWAPSELTPLRIFMLE 60
MGLGKTFQVIAFLYTAMR VDLGL+TALIVTPVNVLHNWR EF KW PSE+ PLRIFML
Sbjct: 756 MGLGKTFQVIAFLYTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLG 815
Query: 61 DVPRDRRAHLLAKWRAKGGVFLIGYSAFRNLSFGKNVKDRHMARETCRALQDGPDILVCD 120
DV R+RR LL KWR KGGVFL+GY+ FRNLS G+ VKD + AR C AL+DGPDILVCD
Sbjct: 816 DVSRERRFDLLTKWRKKGGVFLMGYTNFRNLSLGRGVKDLNAARGICNALRDGPDILVCD 875
Query: 121 EAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNR 180
EAH+IKNTKAD TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS EFRNR
Sbjct: 876 EAHIIKNTKADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNR 935
Query: 181 FQNPIENGQHTNSTQTDVKIMNQRSHILYEELKGFVQRMDMNVVKKDLPPKTVFVITVKL 240
FQNPIENGQH NST DVKIMNQRSHILYE+LKGFVQRMDMNVVKKDLPPKTVFVI+VKL
Sbjct: 936 FQNPIENGQHMNSTAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKL 995
Query: 241 SPLQRKLYKRFLDVHGFTNVRAHHEQLRKRSFFAGYQALARIWNHPGILQLTKEEKERVR 300
SPLQR LY+RFL+++GF++ R E++RK +FFA YQ LA+I NHPGI QL E+ + R
Sbjct: 996 SPLQRILYQRFLELYGFSDGRT-DERMRK-NFFAAYQVLAQILNHPGIPQLRSEDSKNGR 1053
Query: 301 HEDAVENFLVXXXXXXXXXXXXVLAGEKMKETNQFMPRKDGDGFFVKGWWNDLLHGKIYK 360
V+ + ++ GEK + N + DG+ K WW DLL YK
Sbjct: 1054 RGSIVD--IPDDCSSDENIDYNMVTGEKQRTMNDLQDKV--DGYLQKDWWVDLLQKNNYK 1109
Query: 361 ELDQSGKMVLLIDILTMSSDVGDKVLVFSQSIPTLDLIELYLSRIPRRGKQGKLWKKGKD 420
D SGKM+LL+DIL+MS+DVGDK LVFSQSIPTLDLIELYLSR+PR GKQGK WKKGKD
Sbjct: 1110 VSDFSGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKD 1169
Query: 421 WYRLDGRTESSERQKLVEKFNEPLNRRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPT 480
WYR+DG+TESSERQKLV++FNEP N+RVKCTLISTRAGSLGINL+AANRV+IVDGSWNPT
Sbjct: 1170 WYRIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPT 1229
Query: 481 YDLQAIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKE 540
YDLQAI+RAWRYGQKKPVFAYRL+A GT+EEKIYKRQVTKEGLAARVVDRQQVHRTISKE
Sbjct: 1230 YDLQAIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVVDRQQVHRTISKE 1289
Query: 541 EMLHLFEF-GDDENPETLAELDQENGHTCDQINPILAGHS--LKQTVPHSNGSSSS---- 593
EMLHLFEF DDE E + E+ ++N AGHS ++Q + + ++ S
Sbjct: 1290 EMLHLFEFDDDDEKSEAVTEISKQNE----------AGHSNLVEQAILWTKKATLSRVGG 1339
Query: 594 DKLMESLLSQHHPRWIANYH 613
DKLME+LL +H P WI+++H
Sbjct: 1340 DKLMENLLQRHGPNWISSFH 1359
>AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 892 bits (2304), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/620 (71%), Positives = 502/620 (80%), Gaps = 23/620 (3%)
Query: 1 MGLGKTFQVIAFLYTAMRSVDLGLRTALIVTPVNVLHNWRREFIKWAPSELTPLRIFMLE 60
MGLGKTFQVIAFLYTAMR VDLGL+TALIVTPVNVLHNWR EF KW PSE+ PLRIFML
Sbjct: 756 MGLGKTFQVIAFLYTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLG 815
Query: 61 DVPRDRRAHLLAKWRAKGGVFLIGYSAFRNLSFGKNVKDRHMARETCRALQDGPDILVCD 120
DV R+RR LL KWR KGGVFL+GY+ FRNLS G+ VKD + AR C AL+DGPDILVCD
Sbjct: 816 DVSRERRFDLLTKWRKKGGVFLMGYTNFRNLSLGRGVKDLNAARGICNALRDGPDILVCD 875
Query: 121 EAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNR 180
EAH+IKNTKAD TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS EFRNR
Sbjct: 876 EAHIIKNTKADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNR 935
Query: 181 FQNPIENGQHTNSTQTDVKIMNQRSHILYEELKGFVQRMDMNVVKKDLPPKTVFVITVKL 240
FQNPIENGQH NST DVKIMNQRSHILYE+LKGFVQRMDMNVVKKDLPPKTVFVI+VKL
Sbjct: 936 FQNPIENGQHMNSTAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKL 995
Query: 241 SPLQRKLYKRFLDVHGFTNVRAHHEQLRKRSFFAGYQALARIWNHPGILQLTKEEKERVR 300
SPLQR LY+RFL+++GF++ R E++RK +FFA YQ LA+I NHPGI QL E+ + R
Sbjct: 996 SPLQRILYQRFLELYGFSDGRT-DERMRK-NFFAAYQVLAQILNHPGIPQLRSEDSKNGR 1053
Query: 301 HEDAVENFLVXXXXXXXXXXXXVLAGEKMKETNQFMPRKDGDGFFVKGWWNDLLHGKIYK 360
V+ + ++ GEK + N + DG+ K WW DLL YK
Sbjct: 1054 RGSIVD--IPDDCSSDENIDYNMVTGEKQRTMNDLQDKV--DGYLQKDWWVDLLQKNNYK 1109
Query: 361 ELDQSGKMVLLIDILTMSSDVGDKVLVFSQSIPTLDLIELYLSRIPRRGKQGKLWKKGKD 420
D SGKM+LL+DIL+MS+DVGDK LVFSQSIPTLDLIELYLSR+PR GKQGK WKKGKD
Sbjct: 1110 VSDFSGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKD 1169
Query: 421 WYRLDGRTESSERQKLVEKFNEPLNRRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPT 480
WYR+DG+TESSERQKLV++FNEP N+RVKCTLISTRAGSLGINL+AANRV+IVDGSWNPT
Sbjct: 1170 WYRIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPT 1229
Query: 481 YDLQAIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKE 540
YDLQAI+RAWRYGQKKPVFAYRL+A GT+EEKIYKRQVTKEGLAARVVDRQQVHRTISKE
Sbjct: 1230 YDLQAIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVVDRQQVHRTISKE 1289
Query: 541 EMLHLFEF-GDDENPETLAELDQENGHTCDQINPILAGHS--LKQTVPHSNGSSSS---- 593
EMLHLFEF DDE E + E+ ++N AGHS ++Q + + ++ S
Sbjct: 1290 EMLHLFEFDDDDEKSEAVTEISKQNE----------AGHSNLVEQAILWTKKATLSRVGG 1339
Query: 594 DKLMESLLSQHHPRWIANYH 613
DKLME+LL +H P WI+++H
Sbjct: 1340 DKLMENLLQRHGPNWISSFH 1359
>AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 892 bits (2304), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/620 (71%), Positives = 502/620 (80%), Gaps = 23/620 (3%)
Query: 1 MGLGKTFQVIAFLYTAMRSVDLGLRTALIVTPVNVLHNWRREFIKWAPSELTPLRIFMLE 60
MGLGKTFQVIAFLYTAMR VDLGL+TALIVTPVNVLHNWR EF KW PSE+ PLRIFML
Sbjct: 756 MGLGKTFQVIAFLYTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLG 815
Query: 61 DVPRDRRAHLLAKWRAKGGVFLIGYSAFRNLSFGKNVKDRHMARETCRALQDGPDILVCD 120
DV R+RR LL KWR KGGVFL+GY+ FRNLS G+ VKD + AR C AL+DGPDILVCD
Sbjct: 816 DVSRERRFDLLTKWRKKGGVFLMGYTNFRNLSLGRGVKDLNAARGICNALRDGPDILVCD 875
Query: 121 EAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNR 180
EAH+IKNTKAD TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS EFRNR
Sbjct: 876 EAHIIKNTKADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNR 935
Query: 181 FQNPIENGQHTNSTQTDVKIMNQRSHILYEELKGFVQRMDMNVVKKDLPPKTVFVITVKL 240
FQNPIENGQH NST DVKIMNQRSHILYE+LKGFVQRMDMNVVKKDLPPKTVFVI+VKL
Sbjct: 936 FQNPIENGQHMNSTAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKL 995
Query: 241 SPLQRKLYKRFLDVHGFTNVRAHHEQLRKRSFFAGYQALARIWNHPGILQLTKEEKERVR 300
SPLQR LY+RFL+++GF++ R E++RK +FFA YQ LA+I NHPGI QL E+ + R
Sbjct: 996 SPLQRILYQRFLELYGFSDGRT-DERMRK-NFFAAYQVLAQILNHPGIPQLRSEDSKNGR 1053
Query: 301 HEDAVENFLVXXXXXXXXXXXXVLAGEKMKETNQFMPRKDGDGFFVKGWWNDLLHGKIYK 360
V+ + ++ GEK + N + DG+ K WW DLL YK
Sbjct: 1054 RGSIVD--IPDDCSSDENIDYNMVTGEKQRTMNDLQDKV--DGYLQKDWWVDLLQKNNYK 1109
Query: 361 ELDQSGKMVLLIDILTMSSDVGDKVLVFSQSIPTLDLIELYLSRIPRRGKQGKLWKKGKD 420
D SGKM+LL+DIL+MS+DVGDK LVFSQSIPTLDLIELYLSR+PR GKQGK WKKGKD
Sbjct: 1110 VSDFSGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKD 1169
Query: 421 WYRLDGRTESSERQKLVEKFNEPLNRRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPT 480
WYR+DG+TESSERQKLV++FNEP N+RVKCTLISTRAGSLGINL+AANRV+IVDGSWNPT
Sbjct: 1170 WYRIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPT 1229
Query: 481 YDLQAIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKE 540
YDLQAI+RAWRYGQKKPVFAYRL+A GT+EEKIYKRQVTKEGLAARVVDRQQVHRTISKE
Sbjct: 1230 YDLQAIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVVDRQQVHRTISKE 1289
Query: 541 EMLHLFEF-GDDENPETLAELDQENGHTCDQINPILAGHS--LKQTVPHSNGSSSS---- 593
EMLHLFEF DDE E + E+ ++N AGHS ++Q + + ++ S
Sbjct: 1290 EMLHLFEFDDDDEKSEAVTEISKQNE----------AGHSNLVEQAILWTKKATLSRVGG 1339
Query: 594 DKLMESLLSQHHPRWIANYH 613
DKLME+LL +H P WI+++H
Sbjct: 1340 DKLMENLLQRHGPNWISSFH 1359
>AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1458
Length = 1458
Score = 833 bits (2152), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/620 (68%), Positives = 481/620 (77%), Gaps = 44/620 (7%)
Query: 1 MGLGKTFQVIAFLYTAMRSVDLGLRTALIVTPVNVLHNWRREFIKWAPSELTPLRIFMLE 60
MGLGKTFQVIAFLYTAMR VDLGL+TALIVTPVNVLHNWR EF KW PSE+ PLRIFML
Sbjct: 756 MGLGKTFQVIAFLYTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLG 815
Query: 61 DVPRDRRAHLLAKWRAKGGVFLIGYSAFRNLSFGKNVKDRHMARETCRALQDGPDILVCD 120
DV R Y F +F VKD + AR C AL+DGPDILVCD
Sbjct: 816 DVSR--------------------YKFFYERNFW-GVKDLNAARGICNALRDGPDILVCD 854
Query: 121 EAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNR 180
EAH+IKNTKAD TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS EFRNR
Sbjct: 855 EAHIIKNTKADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNR 914
Query: 181 FQNPIENGQHTNSTQTDVKIMNQRSHILYEELKGFVQRMDMNVVKKDLPPKTVFVITVKL 240
FQNPIENGQH NST DVKIMNQRSHILYE+LKGFVQRMDMNVVKKDLPPKTVFVI+VKL
Sbjct: 915 FQNPIENGQHMNSTAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKL 974
Query: 241 SPLQRKLYKRFLDVHGFTNVRAHHEQLRKRSFFAGYQALARIWNHPGILQLTKEEKERVR 300
SPLQR LY+RFL+++GF++ R E++RK +FFA YQ LA+I NHPGI QL E+ + R
Sbjct: 975 SPLQRILYQRFLELYGFSDGRTD-ERMRK-NFFAAYQVLAQILNHPGIPQLRSEDSKNGR 1032
Query: 301 HEDAVENFLVXXXXXXXXXXXXVLAGEKMKETNQFMPRKDGDGFFVKGWWNDLLHGKIYK 360
V+ + ++ GEK + N + DG + K WW DLL YK
Sbjct: 1033 RGSIVD--IPDDCSSDENIDYNMVTGEKQRTMNDLQDKVDG--YLQKDWWVDLLQKNNYK 1088
Query: 361 ELDQSGKMVLLIDILTMSSDVGDKVLVFSQSIPTLDLIELYLSRIPRRGKQGKLWKKGKD 420
D SGKM+LL+DIL+MS+DVGDK LVFSQSIPTLDLIELYLSR+PR GKQGK WKKGKD
Sbjct: 1089 VSDFSGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKD 1148
Query: 421 WYRLDGRTESSERQKLVEKFNEPLNRRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPT 480
WYR+DG+TESSERQKLV++FNEP N+RVKCTLISTRAGSLGINL+AANRV+IVDGSWNPT
Sbjct: 1149 WYRIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPT 1208
Query: 481 YDLQAIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKE 540
YDLQAI+RAWRYGQKKPVFAYRL+A GT+EEKIYKRQVTKEGLAARVVDRQQVHRTISKE
Sbjct: 1209 YDLQAIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVVDRQQVHRTISKE 1268
Query: 541 EMLHLFEF-GDDENPETLAELDQENGHTCDQINPILAGHS--LKQTVPHSNGSSSS---- 593
EMLHLFEF DDE E + E+ ++N AGHS ++Q + + ++ S
Sbjct: 1269 EMLHLFEFDDDDEKSEAVTEISKQNE----------AGHSNLVEQAILWTKKATLSRVGG 1318
Query: 594 DKLMESLLSQHHPRWIANYH 613
DKLME+LL +H P WI+++H
Sbjct: 1319 DKLMENLLQRHGPNWISSFH 1338
>AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=910
Length = 910
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 177/567 (31%), Positives = 276/567 (48%), Gaps = 83/567 (14%)
Query: 1 MGLGKTFQVIAFLYTAMRSVDLG---LRTALIVTPVNVLHNWRREFIKWAPSELTPLRIF 57
MGLGKT Q I LYT + G ++ A+IVTP +++ NW E KW + ++
Sbjct: 213 MGLGKTLQSITLLYTLLCQGFDGTPMVKKAIIVTPTSLVSNWEAEIKKWVGDRI---QLI 269
Query: 58 MLEDVPRD---RRAHLLAKWRAKGGVFLIGYSAFRNLSFGKNVKDRHMARETCRALQDGP 114
L + RD + R+ V +I Y FR S + E+C
Sbjct: 270 ALCESTRDDVLSGIDSFTRPRSALQVLIISYETFRMHS------SKFCQSESC------- 316
Query: 115 DILVCDEAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 174
D+L+CDEAH +KN + +AL + C+RR+ L+G+P+QN+L E++ MV+F G LG +
Sbjct: 317 DLLICDEAHRLKNDQTLTNRALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDA 376
Query: 175 HEFRNRFQNPIENGQHTNSTQTDVKIMNQRSHILYEELKGFVQRMDMNVVKKDLPPKTVF 234
FR+ ++ PI G+ +T+ + + RS L ++ F+ R ++ LPPK +
Sbjct: 377 AHFRHYYEAPIICGREPTATEEEKNLAADRSAELSSKVNQFILRRTNALLSNHLPPKIIE 436
Query: 235 VITVKLSPLQRKLYKRFLDVHGFTNVRAHHEQLRKRSFFAGYQALARIWNHPGILQLTKE 294
V+ K++ LQ LY F+ RA + ++ A AL ++ NHP ++ T +
Sbjct: 437 VVCCKMTTLQSTLYNHFISSKNLK--RALADNAKQTKVLAYITALKKLCNHPKLIYDTIK 494
Query: 295 EKE--RVRHEDAVENFLVXXXXXXXXXXXXVLAGEKMKETNQFMPRKDGDGFFVKGWWND 352
V E+ +E F + +G T GDG +V
Sbjct: 495 SGNPGTVGFENCLEFF-----------PAEMFSGRSGAWTG-------GDGAWV------ 530
Query: 353 LLHGKIYKELDQSGKMVLLIDILT-MSSDVGDKVLVFSQSIPTLDLIELYLSRIPRRGKQ 411
+ SGKM +L +L + D++++ S TLDL
Sbjct: 531 ----------ELSGKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLF------------- 567
Query: 412 GKLWKKGK-DWYRLDGRTESSERQKLVEKFNEPLNRRVKCTLISTRAGSLGINLHAANRV 470
+L ++ + + RLDG T S+RQKLV + N+P L+S++AG G+NL ANR+
Sbjct: 568 AQLCRERRYPFLRLDGSTTISKRQKLVNRLNDPTKDEFA-FLLSSKAGGCGLNLIGANRL 626
Query: 471 VIVDGSWNPTYDLQAIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVVDR 530
V+ D WNP D QA R WR GQKK V+ YR L+ GT+EEK+Y+RQ++KEGL +V+
Sbjct: 627 VLFDPDWNPANDKQAAARVWRDGQKKRVYVYRFLSTGTIEEKVYQRQMSKEGL-QKVIQH 685
Query: 531 QQVHRT------ISKEEMLHLFEFGDD 551
+Q + +S E++ LF F D
Sbjct: 686 EQTDNSTRQGNLLSTEDLRDLFSFHGD 712
>AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=908
Length = 908
Score = 241 bits (616), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 177/565 (31%), Positives = 274/565 (48%), Gaps = 81/565 (14%)
Query: 1 MGLGKTFQVIAFLYTAMRSVDLG---LRTALIVTPVNVLHNWRREFIKWAPSELTPLRIF 57
MGLGKT Q I LYT + G ++ A+IVTP +++ NW E KW + I
Sbjct: 213 MGLGKTLQSITLLYTLLCQGFDGTPMVKKAIIVTPTSLVSNWEAEIKKWVGDRIQ--LIA 270
Query: 58 MLEDVPRDRRAHLLAKWRAKGG--VFLIGYSAFRNLSFGKNVKDRHMARETCRALQDGPD 115
+ E D + + + R + V +I Y FR S + E+C D
Sbjct: 271 LCESTRDDVLSGIDSFTRPRSALQVLIISYETFRMHS------SKFCQSESC-------D 317
Query: 116 ILVCDEAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSH 175
+L+CDEAH +KN + +AL + C+RR+ L+G+P+QN+L E++ MV+F G LG +
Sbjct: 318 LLICDEAHRLKNDQTLTNRALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAA 377
Query: 176 EFRNRFQNPIENGQHTNSTQTDVKIMNQRSHILYEELKGFVQRMDMNVVKKDLPPKTVFV 235
FR+ ++ PI G+ +T+ + + RS L ++ F+ R ++ LPPK + V
Sbjct: 378 HFRHYYEAPIICGREPTATEEEKNLAADRSAELSSKVNQFILRRTNALLSNHLPPKIIEV 437
Query: 236 ITVKLSPLQRKLYKRFLDVHGFTNVRAHHEQLRKRSFFAGYQALARIWNHPGILQLTKEE 295
+ K++ LQ Y L + RA + ++ A AL ++ NHP ++ T +
Sbjct: 438 VCCKMTTLQ-TTYNGCLCMQL---KRALADNAKQTKVLAYITALKKLCNHPKLIYDTIKS 493
Query: 296 KE--RVRHEDAVENFLVXXXXXXXXXXXXVLAGEKMKETNQFMPRKDGDGFFVKGWWNDL 353
V E+ +E F + +G T GDG +V
Sbjct: 494 GNPGTVGFENCLEFF-----------PAEMFSGRSGAWTG-------GDGAWV------- 528
Query: 354 LHGKIYKELDQSGKMVLLIDILT-MSSDVGDKVLVFSQSIPTLDLIELYLSRIPRRGKQG 412
+ SGKM +L +L + D++++ S TLDL L R
Sbjct: 529 ---------ELSGKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFA-QLCR-------- 570
Query: 413 KLWKKGKDWYRLDGRTESSERQKLVEKFNEPLNRRVKCTLISTRAGSLGINLHAANRVVI 472
++ + RLDG T S+RQKLV + N+P L+S++AG G+NL ANR+V+
Sbjct: 571 ---ERRYPFLRLDGSTTISKRQKLVNRLNDPTKDEFA-FLLSSKAGGCGLNLIGANRLVL 626
Query: 473 VDGSWNPTYDLQAIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVVDRQQ 532
D WNP D QA R WR GQKK V+ YR L+ GT+EEK+Y+RQ++KEGL +V+ +Q
Sbjct: 627 FDPDWNPANDKQAAARVWRDGQKKRVYVYRFLSTGTIEEKVYQRQMSKEGL-QKVIQHEQ 685
Query: 533 VHRT------ISKEEMLHLFEFGDD 551
+ +S E++ LF F D
Sbjct: 686 TDNSTRQGNLLSTEDLRDLFSFHGD 710
>AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORWARD
LENGTH=862
Length = 862
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 174/569 (30%), Positives = 267/569 (46%), Gaps = 99/569 (17%)
Query: 1 MGLGKTFQVIAFLYTAM-RSVDLGLRT--------ALIVTPVNVLHNWRREFIKWAPSEL 51
MGLGKT Q IAFL + D G LI+ P +++HNW EF +WA
Sbjct: 166 MGLGKTIQTIAFLAAVYGKDGDAGESCLLESDKGPVLIICPSSIIHNWESEFSRWA---- 221
Query: 52 TPLRIFMLEDVPRDRRAHLLAKWRAKG-GVFLIGYSAFRNLSFGKNVKDRHMARETCRAL 110
F + R +L K +A+G V + + FR
Sbjct: 222 ---SFFKVSVYHGSNRDMILEKLKARGVEVLVTSFDTFR--------------------- 257
Query: 111 QDGP-------DILVCDEAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMV 163
GP +I++ DEAH +KN K+ + +A ++K ++RI LTG+ +QN + E + +
Sbjct: 258 IQGPVLSGINWEIVIADEAHRLKNEKSKLYEACLEIKTKKRIGLTGTVMQNKISELFNLF 317
Query: 164 DFVREGFLGSSHEFRNRFQNPIENGQHTNSTQTDVKIMNQRSHILYEELKGF-VQRMDMN 222
++V G LG+ FR+ + P++ GQ + + V+I ++R L L+ + ++R
Sbjct: 318 EWVAPGSLGTREHFRDFYDEPLKLGQRATAPERFVQIADKRKQHLGSLLRKYMLRRTKEE 377
Query: 223 VVKKDLPPKTVFVITVKLSPLQRKLYKRFLDVHGFT------NVRAHHEQLRKRSFFAGY 276
+ + K V+ ++S LQR++Y+R + + N A L++
Sbjct: 378 TIGHLMMGKEDNVVFCQMSQLQRRVYQRMIQLPEIQCLVNKDNPCACGSPLKQSECCRRI 437
Query: 277 QALARIW------NHPGILQLTKEEKERVRHEDAVENFLVXXXXXXXXXXXXVLAGEKMK 330
IW NH G D+ LV L E +K
Sbjct: 438 VPDGTIWSYLHRDNHDGC--------------DSCPFCLVLPCLMKLQQISNHL--ELIK 481
Query: 331 ETNQFMPRKDG-DGFFVKGWWN---DLLHG----KIYKELD---QSGKMVLLIDILTMSS 379
+ P K D FV + DLL G K + +L GKM L ++
Sbjct: 482 PNPKDEPEKQKKDAEFVSTVFGTDIDLLGGISASKSFMDLSDVKHCGKMRALEKLMASWI 541
Query: 380 DVGDKVLVFSQSIPTLDLIELYLSRIPRRGKQGKLWKKGKDWYRLDGRTESSERQKLVEK 439
GDK+L+FS S+ LD++E +L R KG + RLDG T ++ RQ LV+
Sbjct: 542 SKGDKILLFSYSVRMLDILEKFLIR------------KGYSFARLDGSTPTNLRQSLVDD 589
Query: 440 FNEPLNRRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQAIYRAWRYGQKKPVF 499
FN +++V LIST+AG LG+NL +ANRVVI D +WNP++DLQA R++RYGQK+ V
Sbjct: 590 FNASPSKQV--FLISTKAGGLGLNLVSANRVVIFDPNWNPSHDLQAQDRSFRYGQKRHVV 647
Query: 500 AYRLLAHGTMEEKIYKRQVTKEGLAARVV 528
+RLL+ G++EE +Y RQV K+ L+ V
Sbjct: 648 VFRLLSAGSLEELVYTRQVYKQQLSNIAV 676
>AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 |
chr5:25592160-25598405 REVERSE LENGTH=1090
Length = 1090
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 158/556 (28%), Positives = 261/556 (46%), Gaps = 67/556 (12%)
Query: 1 MGLGKTFQVIAFLYTAMRSVDLGLRTALIVTPVNVLHNWRREFIKWAPSELTPLRIFMLE 60
MGLGKT Q+ +FL S ++ AL+V P +L +W +E S++T +
Sbjct: 404 MGLGKTMQICSFLAGLFHSK--LIKRALVVAPKTLLPHWMKELATVGLSQMT-REYYGTS 460
Query: 61 DVPRDRRAHLLAKWRAKGGVFLIGYSAFRNLSFGKNVKDRHMARETCRALQDGP--DILV 118
R+ H + + + G+ L Y RN + D + + +DG D ++
Sbjct: 461 TKAREYDLHHILQGK---GILLTTYDIVRNNTKALQGDDHYTDEDD----EDGNKWDYMI 513
Query: 119 CDEAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFR 178
DE H+IKN ++L ++ RI ++G+P+QNNL E + + +F G LG + F+
Sbjct: 514 LDEGHLIKNPNTQRAKSLLEIPSSHRIIISGTPIQNNLKELWALFNFSCPGLLGDKNWFK 573
Query: 179 NRFQNPIENGQHTNSTQTDVKIMNQRSHILYEELKGF-VQRMDMNVVKKD-----LPPKT 232
+++ I G N+T + +I + + L E ++ F ++R+ V D L K
Sbjct: 574 QNYEHYILRGTDKNATDREQRIGSTVAKNLREHIQPFFLRRLKSEVFGDDGATSKLSKKD 633
Query: 233 VFVITVKLSPLQRKLYKRFLDVHGFTNVRAHHEQLRKRSFFAGYQALARIWNHPGILQLT 292
V+ ++L+ QR+LY+ FL+ + S A L +I +HP L LT
Sbjct: 634 EIVVWLRLTACQRQLYEAFLNSEIVLSAF-------DGSPLAALTILKKICDHP--LLLT 684
Query: 293 KEEKERVRHEDAVENFLVXXXXXXXXXXXXVLAGEKMKETNQFMPRKDGDGFFVKGWWND 352
K E V + +++ L AG + D D F K ND
Sbjct: 685 KRAAEDVL--EGMDSTLTQEE-----------AGVAERLAMHIADNVDTDDFQTK---ND 728
Query: 353 LLHGKIYKELDQSGKMVLLIDILTMSSDVGDKVLVFSQSIPTLDLIELYLSRIPRRGKQG 412
+ S K+ ++ +L G +VL+FSQ+ L+LI Q
Sbjct: 729 SI----------SCKLSFIMSLLENLIPEGHRVLIFSQTRKMLNLI------------QD 766
Query: 413 KLWKKGKDWYRLDGRTESSERQKLVEKFNEPLNRRVKCTLISTRAGSLGINLHAANRVVI 472
L G + R+DG T++ +R K VE+F E L++++ G LG+ L A+RV++
Sbjct: 767 SLTSNGYSFLRIDGTTKAPDRLKTVEEFQE--GHVAPIFLLTSQVGGLGLTLTKADRVIV 824
Query: 473 VDGSWNPTYDLQAIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVVDRQQ 532
VD +WNP+ D Q++ RA+R GQ K V YRL+ T+EEKIY++QV K GL + ++
Sbjct: 825 VDPAWNPSTDNQSVDRAYRIGQTKDVIVYRLMTSATVEEKIYRKQVYKGGLFKTATEHKE 884
Query: 533 VHRTISKEEMLHLFEF 548
R S++++ LF
Sbjct: 885 QIRYFSQQDLRELFSL 900
>AT5G19310.1 | Symbols: | Homeotic gene regulator |
chr5:6498906-6503432 FORWARD LENGTH=1064
Length = 1064
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 154/553 (27%), Positives = 245/553 (44%), Gaps = 108/553 (19%)
Query: 1 MGLGKTFQVIAFLYTAMRSVDLGLRTALIVTPVNVLHNWRREFIKWAPSELTPLRIFMLE 60
MGLGKT Q IA + + S DL LI+ P VL NW EF WAPS + F L
Sbjct: 413 MGLGKTIQTIALIAYLLESKDLH-GPHLILAPKAVLPNWENEFALWAPS----ISAF-LY 466
Query: 61 DVPRDRRAHLLAKWRAKGGVFLIGYSAF----RNLSFGKNVKDRHMARETCRALQDGPDI 116
D +++R + A R GG F + + + R+ +F K + +M
Sbjct: 467 DGSKEKRTEIRA--RIAGGKFNVLITHYDLIMRDKAFLKKIDWNYM-------------- 510
Query: 117 LVCDEAHMIKNTKADVTQALKQ-VKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSH 175
+ DE H +KN + + + L + +RR+ LTG+P+QN+L E + +++F+ S H
Sbjct: 511 -IVDEGHRLKNHECALAKTLGTGYRIKRRLLLTGTPIQNSLQELWSLLNFLLPHIFNSIH 569
Query: 176 EFRNRFQNPI-ENGQHTNSTQTDVKIMNQRSHILYEELKGFVQRMDMNVVKKDLPPKTVF 234
F F P E G + + + ++ I+N+ H+ ++ F+ R + V+K LP KT
Sbjct: 570 NFEEWFNTPFAECGSASLTDEEELLIINRLHHV----IRPFLLRRKKSEVEKFLPGKTQV 625
Query: 235 VITVKLSPLQRKLYKRFLDVHGFTNVRAHHEQLRKRSFFAGYQALARIWNHPGILQLTKE 294
++ +S Q+ YK+ DV V H + +S L + NHP +
Sbjct: 626 ILKCDMSAWQKLYYKQVTDV---GRVGLHSGNGKSKSLQNLTMQLRKCCNHPYL------ 676
Query: 295 EKERVRHEDAVENFLVXXXXXXXXXXXXVLAGEKMKETNQFMPRKDGDGFFVKGWWNDLL 354
V V A K + ++ +P+
Sbjct: 677 --------------FVGADYNMCKKPEIVRASGKFELLDRLLPK---------------- 706
Query: 355 HGKIYKELDQSGKMVLLIDILTMSSDVGDKVLVFSQSIPTLDLIELYLSRIPRRGKQGKL 414
L ++G +LL FSQ +DL+E+YLS
Sbjct: 707 -------LKKAGHRILL----------------FSQMTRLIDLLEIYLSL---------- 733
Query: 415 WKKGKDWYRLDGRTESSERQKLVEKFNEPLNRRVKCTLISTRAGSLGINLHAANRVVIVD 474
+ RLDG T++ +R L+++FNEP + L+STRAG LG+NL A+ ++I D
Sbjct: 734 --NDYMYLRLDGSTKTDQRGILLKQFNEP-DSPYFMFLLSTRAGGLGLNLQTADTIIIFD 790
Query: 475 GSWNPTYDLQAIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVVDRQQVH 534
WNP D QA RA R GQKK V + L++ G++EE I +R K G+ A+V+ +
Sbjct: 791 SDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSIGSIEEVILERAKQKMGIDAKVIQAGLFN 850
Query: 535 RTISKEEMLHLFE 547
T + ++ + E
Sbjct: 851 TTSTAQDRREMLE 863
>AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1202
Length = 1202
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 155/574 (27%), Positives = 245/574 (42%), Gaps = 127/574 (22%)
Query: 1 MGLGKTFQVIAFLYTAMRSVDLGLRTALIVTPVNVLHNWRREFIKWAPSELTPLRIFML- 59
MGLGKT Q IAFL + L L+V P++ + NW REF WAP + + M
Sbjct: 252 MGLGKTIQSIAFLASLFEE---NLSPHLVVAPLSTIRNWEREFATWAPH----MNVVMYT 304
Query: 60 -----EDVPRDRRAHLLAKWRAKGGVFLIGYSAFR-NLSFGKNVKDRHMARETCRALQDG 113
DV + + ++K V L Y +S +K TC
Sbjct: 305 GDSEARDVIWEHEFYFSEGRKSKFDVLLTTYEMVHPGISVLSPIK------WTC------ 352
Query: 114 PDILVCDEAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGS 173
++ DE H +KN K+ + +L Q + + LTG+PLQNNL E + ++ F+ GS
Sbjct: 353 ---MIIDEGHRLKNQKSKLYSSLSQFTSKHIVLLTGTPLQNNLNELFALMHFLDADKFGS 409
Query: 174 SHEFRNRFQNPIENGQHTNSTQTDVKIMNQRSHILYEELKGFVQRMDMNVVKKDLPPKTV 233
+F+ D+ Q S + ++R+ +V+K +PPK
Sbjct: 410 LEKFQ------------------DINKEEQISRLHQMLAPHLLRRLKKDVLKDKVPPKKE 451
Query: 234 FVITVKLSPLQRKLYKRFLDVHGFTNVRAHHEQLRKRSFFAGYQALARIWNHPGILQLTK 293
++ V +S Q+++YK + TN + R L ++ +HP +L +
Sbjct: 452 LILRVDMSSQQKEVYKAVI-----TNNYQVLTKKRDAKISNVLMKLRQVCSHPYLLPDFE 506
Query: 294 EEKERVRHEDAVENFLVXXXXXXXXXXXXVLAGEKMKETNQFMPRKDGDGFFVKGWWNDL 353
R EDA E F
Sbjct: 507 P-----RFEDANEAFT-------------------------------------------- 517
Query: 354 LHGKIYKELDQSGKMVLLIDILTMSSDVGDKVLVFSQSIPTLDLIELYLSRIPRRGKQGK 413
K L+ SGK+ LL ++ + G +VL+++Q TL L+E Y + K
Sbjct: 518 ------KLLEASGKLQLLDKMMVKLKEQGHRVLIYTQFQHTLYLLEDYFT--------FK 563
Query: 414 LWKKGKDWYRLDGRTESSERQKLVEKFNEPLNRRVKCTLISTRAGSLGINLHAANRVVIV 473
W ++ R+DG+ ERQ +++FN + R C L+STRAG +GINL A+ V+I
Sbjct: 564 NW----NYERIDGKISGPERQVRIDRFNAENSNRF-CFLLSTRAGGIGINLATADTVIIY 618
Query: 474 DGSWNPTYDLQAIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVVDRQQV 533
D WNP DLQA+ R R GQ V YRL+ GT+EE++ + K L VV +Q
Sbjct: 619 DSDWNPHADLQAMARVHRLGQTNKVMIYRLIHKGTVEERMMEITKNKMLLEHLVVGKQH- 677
Query: 534 HRTISKEEMLHLFEFGDDENPETLAELDQENGHT 567
+ ++E+ + ++G + E +E + E G +
Sbjct: 678 ---LCQDELDDIIKYG---SKELFSEENDEAGRS 705
>AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1161
Length = 1161
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 155/574 (27%), Positives = 245/574 (42%), Gaps = 127/574 (22%)
Query: 1 MGLGKTFQVIAFLYTAMRSVDLGLRTALIVTPVNVLHNWRREFIKWAPSELTPLRIFML- 59
MGLGKT Q IAFL + L L+V P++ + NW REF WAP + + M
Sbjct: 211 MGLGKTIQSIAFLASLFEE---NLSPHLVVAPLSTIRNWEREFATWAPH----MNVVMYT 263
Query: 60 -----EDVPRDRRAHLLAKWRAKGGVFLIGYSAFR-NLSFGKNVKDRHMARETCRALQDG 113
DV + + ++K V L Y +S +K TC
Sbjct: 264 GDSEARDVIWEHEFYFSEGRKSKFDVLLTTYEMVHPGISVLSPIK------WTC------ 311
Query: 114 PDILVCDEAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGS 173
++ DE H +KN K+ + +L Q + + LTG+PLQNNL E + ++ F+ GS
Sbjct: 312 ---MIIDEGHRLKNQKSKLYSSLSQFTSKHIVLLTGTPLQNNLNELFALMHFLDADKFGS 368
Query: 174 SHEFRNRFQNPIENGQHTNSTQTDVKIMNQRSHILYEELKGFVQRMDMNVVKKDLPPKTV 233
+F+ D+ Q S + ++R+ +V+K +PPK
Sbjct: 369 LEKFQ------------------DINKEEQISRLHQMLAPHLLRRLKKDVLKDKVPPKKE 410
Query: 234 FVITVKLSPLQRKLYKRFLDVHGFTNVRAHHEQLRKRSFFAGYQALARIWNHPGILQLTK 293
++ V +S Q+++YK + TN + R L ++ +HP +L +
Sbjct: 411 LILRVDMSSQQKEVYKAVI-----TNNYQVLTKKRDAKISNVLMKLRQVCSHPYLLPDFE 465
Query: 294 EEKERVRHEDAVENFLVXXXXXXXXXXXXVLAGEKMKETNQFMPRKDGDGFFVKGWWNDL 353
R EDA E F
Sbjct: 466 P-----RFEDANEAFT-------------------------------------------- 476
Query: 354 LHGKIYKELDQSGKMVLLIDILTMSSDVGDKVLVFSQSIPTLDLIELYLSRIPRRGKQGK 413
K L+ SGK+ LL ++ + G +VL+++Q TL L+E Y + K
Sbjct: 477 ------KLLEASGKLQLLDKMMVKLKEQGHRVLIYTQFQHTLYLLEDYFT--------FK 522
Query: 414 LWKKGKDWYRLDGRTESSERQKLVEKFNEPLNRRVKCTLISTRAGSLGINLHAANRVVIV 473
W ++ R+DG+ ERQ +++FN + R C L+STRAG +GINL A+ V+I
Sbjct: 523 NW----NYERIDGKISGPERQVRIDRFNAENSNRF-CFLLSTRAGGIGINLATADTVIIY 577
Query: 474 DGSWNPTYDLQAIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVVDRQQV 533
D WNP DLQA+ R R GQ V YRL+ GT+EE++ + K L VV +Q
Sbjct: 578 DSDWNPHADLQAMARVHRLGQTNKVMIYRLIHKGTVEERMMEITKNKMLLEHLVVGKQH- 636
Query: 534 HRTISKEEMLHLFEFGDDENPETLAELDQENGHT 567
+ ++E+ + ++G + E +E + E G +
Sbjct: 637 ---LCQDELDDIIKYG---SKELFSEENDEAGRS 664
>AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA
binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20103807 FORWARD
LENGTH=2045
Length = 2045
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 153/581 (26%), Positives = 262/581 (45%), Gaps = 109/581 (18%)
Query: 1 MGLGKTFQVIAFLYTAM-----RSVDLGLRTALIVTPVNVLHNWRREFIKWAPSELTPLR 55
MGLGKT Q A + + + +L + ++IV P ++ +W E K+ +L+ L
Sbjct: 1478 MGLGKTLQASAIVASDAAERRGSTDELDVFPSIIVCPSTLVGHWAFEIEKYI--DLSLLS 1535
Query: 56 IFMLEDVPRDRRAHLLAKWRAKGGVFLIGYSAFRNLSFGKNVKDRHMARETCRALQDGPD 115
+ +DR + L + V + Y R ++ Q +
Sbjct: 1536 VLQYVGSAQDRVS--LREQFNNHNVIITSYDVVR--------------KDVDYLTQFSWN 1579
Query: 116 ILVCDEAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSH 175
+ DE H+IKN K+ +T A+KQ+K Q R+ L+G+P+QNN+ME + + DF+ GFLG+
Sbjct: 1580 YCILDEGHIIKNAKSKITAAVKQLKAQHRLILSGTPIQNNIMELWSLFDFLMPGFLGTER 1639
Query: 176 EFRNRFQNPIENGQHTNSTQTDVKIMNQRSHILYEELKGFVQRMDMNVVKKDLPPKTVFV 235
+F+ + P+ + + D + L++++ F+ R V DLP K +
Sbjct: 1640 QFQASYGKPLLAARDPKCSAKDAEAGVLAMEALHKQVMPFLLRRTKEEVLSDLPEKIIQD 1699
Query: 236 ITVKLSPLQRKLYKRF------------LDVHGFTNVRAHHEQLRKRS--FFAGYQALAR 281
LSP+Q KLY++F + V G + K S F Q L +
Sbjct: 1700 RYCDLSPVQLKLYEQFSGSSAKQEISSIIKVDGSADSGNADVAPTKASTHVFQALQYLLK 1759
Query: 282 IWNHPGILQLTKEEKERVRHEDAVENFLVXXXXXXXXXXXXVLAGEKMKETNQFMPRKDG 341
+ +HP ++ G+K+ E P
Sbjct: 1760 LCSHP-----------------------------------LLVLGDKVTE-----PVASD 1779
Query: 342 DGFFVKGWWNDLLHGKIYKELDQSGKMVLLIDIL--------TMSSD----VGD-KVLVF 388
+ G +D++ +++K + S K+V L +IL SSD VG +VL+F
Sbjct: 1780 LAAMING-CSDII-TELHK-VQHSPKLVALQEILEECGIGSDASSSDGTLSVGQHRVLIF 1836
Query: 389 SQSIPTLDLIE--LYLSRIPRRGKQGKLWKKGKDWYRLDGRTESSERQKLVEKFNEPLNR 446
+Q LD+IE L+ + + K + RLDG +R ++V+ FN +
Sbjct: 1837 AQHKALLDIIEKDLFQAHM-----------KSVTYMRLDGSVVPEKRFEIVKAFNS--DP 1883
Query: 447 RVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQAIYRAWRYGQKKPVFAYRLLAH 506
+ L++T G LG+NL +A+ +V ++ WNP D QA+ RA R GQK+ V +RL+
Sbjct: 1884 TIDVLLLTTHVGGLGLNLTSADTLVFMEHDWNPMRDHQAMDRAHRLGQKRVVNVHRLIMR 1943
Query: 507 GTMEEKIYKRQVTKEGLAARVVDRQQVH-RTISKEEMLHLF 546
GT+EEK+ Q K +A V++ + +T++ +++L LF
Sbjct: 1944 GTLEEKVMSLQKFKVSVANTVINAENASMKTMNTDQLLDLF 1984
>AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20104153 FORWARD
LENGTH=2129
Length = 2129
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 153/581 (26%), Positives = 262/581 (45%), Gaps = 109/581 (18%)
Query: 1 MGLGKTFQVIAFLYTAM-----RSVDLGLRTALIVTPVNVLHNWRREFIKWAPSELTPLR 55
MGLGKT Q A + + + +L + ++IV P ++ +W E K+ +L+ L
Sbjct: 1509 MGLGKTLQASAIVASDAAERRGSTDELDVFPSIIVCPSTLVGHWAFEIEKYI--DLSLLS 1566
Query: 56 IFMLEDVPRDRRAHLLAKWRAKGGVFLIGYSAFRNLSFGKNVKDRHMARETCRALQDGPD 115
+ +DR + L + V + Y R ++ Q +
Sbjct: 1567 VLQYVGSAQDRVS--LREQFNNHNVIITSYDVVR--------------KDVDYLTQFSWN 1610
Query: 116 ILVCDEAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSH 175
+ DE H+IKN K+ +T A+KQ+K Q R+ L+G+P+QNN+ME + + DF+ GFLG+
Sbjct: 1611 YCILDEGHIIKNAKSKITAAVKQLKAQHRLILSGTPIQNNIMELWSLFDFLMPGFLGTER 1670
Query: 176 EFRNRFQNPIENGQHTNSTQTDVKIMNQRSHILYEELKGFVQRMDMNVVKKDLPPKTVFV 235
+F+ + P+ + + D + L++++ F+ R V DLP K +
Sbjct: 1671 QFQASYGKPLLAARDPKCSAKDAEAGVLAMEALHKQVMPFLLRRTKEEVLSDLPEKIIQD 1730
Query: 236 ITVKLSPLQRKLYKRF------------LDVHGFTNVRAHHEQLRKRS--FFAGYQALAR 281
LSP+Q KLY++F + V G + K S F Q L +
Sbjct: 1731 RYCDLSPVQLKLYEQFSGSSAKQEISSIIKVDGSADSGNADVAPTKASTHVFQALQYLLK 1790
Query: 282 IWNHPGILQLTKEEKERVRHEDAVENFLVXXXXXXXXXXXXVLAGEKMKETNQFMPRKDG 341
+ +HP ++ G+K+ E P
Sbjct: 1791 LCSHP-----------------------------------LLVLGDKVTE-----PVASD 1810
Query: 342 DGFFVKGWWNDLLHGKIYKELDQSGKMVLLIDIL--------TMSSD----VGD-KVLVF 388
+ G +D++ +++K + S K+V L +IL SSD VG +VL+F
Sbjct: 1811 LAAMING-CSDII-TELHK-VQHSPKLVALQEILEECGIGSDASSSDGTLSVGQHRVLIF 1867
Query: 389 SQSIPTLDLIE--LYLSRIPRRGKQGKLWKKGKDWYRLDGRTESSERQKLVEKFNEPLNR 446
+Q LD+IE L+ + + K + RLDG +R ++V+ FN +
Sbjct: 1868 AQHKALLDIIEKDLFQAHM-----------KSVTYMRLDGSVVPEKRFEIVKAFNS--DP 1914
Query: 447 RVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQAIYRAWRYGQKKPVFAYRLLAH 506
+ L++T G LG+NL +A+ +V ++ WNP D QA+ RA R GQK+ V +RL+
Sbjct: 1915 TIDVLLLTTHVGGLGLNLTSADTLVFMEHDWNPMRDHQAMDRAHRLGQKRVVNVHRLIMR 1974
Query: 507 GTMEEKIYKRQVTKEGLAARVVDRQQVH-RTISKEEMLHLF 546
GT+EEK+ Q K +A V++ + +T++ +++L LF
Sbjct: 1975 GTLEEKVMSLQKFKVSVANTVINAENASMKTMNTDQLLDLF 2015
>AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 |
chr2:9179622-9182356 REVERSE LENGTH=816
Length = 816
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 145/548 (26%), Positives = 253/548 (46%), Gaps = 98/548 (17%)
Query: 2 GLGKTFQVIAFLYTAMRSVDLGLRTALIVTPVNVLHNWRREFIKWAPSELTPLRIFMLED 61
G GKTF +I+FL + M ++D R L+V P ++ +W+REF W ++ L + ++
Sbjct: 295 GSGKTFLLISFLQSFM-AMDPQAR-PLVVLPKGIIESWKREFTLWEVEKIPLLDFYSVKA 352
Query: 62 VPRDRRAHLLAKWRAKGGVFLIGYSAFRNLSFGKNVKDRHMARETCR-ALQDGPDILVCD 120
R ++ +L +W + + +GY F + N + A E C+ L + P +L+ D
Sbjct: 353 ESRKQQLKVLGQWIKERSILFLGYQQFTRIICDDNFE---AASEDCKLILLEKPTLLILD 409
Query: 121 EAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLG--SSHEFR 178
E H +N + + +L +VK +R++ LTG+ QNN+ E + ++D VR FL + E
Sbjct: 410 EGHTSRNKETYMLSSLARVKTRRKVVLTGTLFQNNVEEVFNILDLVRPKFLKRPGTREIV 469
Query: 179 NRFQNPIE--NGQHTNSTQTD--------VKIMNQRSHILYEE--LKGFVQRMDMNVV-- 224
+R + E G+ N + + V++ QRS + L ++ M N++
Sbjct: 470 SRIMSKAEIPRGKQVNQSSSSIEGTFFAAVELTLQRSTNFSAKASLIKDLREMTRNILHY 529
Query: 225 -KKD----LPPKTVFVITVKLSPLQRKLYKRFLDVHGFTNVRAHHEQLRKRSFFAGYQAL 279
K D LP + F + + LS +QR +V G LRK F
Sbjct: 530 HKADFSGLLPGLSEFTVMLNLSSIQRD------EVKG----------LRKMELFKQISLG 573
Query: 280 ARIWNHPGILQLTKEEKERVRHEDAVENFLVXXXXXXXXXXXXVLAGEK-MKETNQFMPR 338
A ++ HP + +E GEK + N + +
Sbjct: 574 AALYIHPKLKSFLEENPSN---------------------------GEKGFSDNNTTVMK 606
Query: 339 KDGDGFFVKGWWNDLLHGKIYKELD--QSGKMVLLIDILTMSSDVGDKVLVFSQSIPTLD 396
D K+ K+++ KM +++L + G+K+LVFSQ I +
Sbjct: 607 LD----------------KMLKKINVRDGVKMKFFLNLLALCESTGEKLLVFSQYIVPIK 650
Query: 397 LIELYLSRIPRRGKQGKLWKKGKDWYRLDGRTESSERQKLVEKFNEPLNRRVKCTLISTR 456
+E +S + K W+ GK+ + + G + + +R+ +E+FN L +V S +
Sbjct: 651 TLERLMSSM-------KGWRLGKEMFTITGDSSNEQREWSMERFNNSLEAKV--FFGSIK 701
Query: 457 AGSLGINLHAANRVVIVDGSWNPTYDLQAIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKR 516
A GI+L A+RV+I+D NP+ QA+ RA+R GQK+ V+AY+L+A + EE+ Y+
Sbjct: 702 ACGEGISLVGASRVLILDVHLNPSVTQQAVARAYRPGQKRKVYAYKLVAADSPEEENYET 761
Query: 517 QVTKEGLA 524
KE ++
Sbjct: 762 CTRKEMMS 769
>AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 |
chr5:18083659-18092162 REVERSE LENGTH=2223
Length = 2223
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 154/560 (27%), Positives = 248/560 (44%), Gaps = 110/560 (19%)
Query: 1 MGLGKTFQVIAFLYTAMRSVDLGL-RTALIVTPVNVLHNWRREFIKWAPSELTPLRIFML 59
MGLGKT AFL + + G+ R L++ P++ + NW EF WAP L +
Sbjct: 716 MGLGKTVSASAFLSSLY--FEFGVARPCLVLVPLSTMPNWLSEFSLWAPL----LNVVEY 769
Query: 60 EDVPRDRRAHLLAKWRAKGGVFLIGYSAFRNLSFGKNV--KDRHMARETCRALQDGP-DI 116
+ R +W AK + + S+ NV M L+ P ++
Sbjct: 770 HGSAKGRAIIRDYEWHAKNSTG----TTKKPTSYKFNVLLTTYEMVLADSSHLRGVPWEV 825
Query: 117 LVCDEAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 176
LV DE H +KN+++ + L Q R+ LTG+PLQNN+ E Y +++F++ S
Sbjct: 826 LVVDEGHRLKNSESKLFSLLNTFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPSSFPSLSS 885
Query: 177 FRNRFQNPIENGQHTNSTQTDVKIMNQRSHILYEELKGFVQRMDMNVVKKD----LPPKT 232
F RF H ++ V EELK V + +KKD +PPKT
Sbjct: 886 FEERF--------HDLTSAEKV-----------EELKKLVAPHMLRRLKKDAMQNIPPKT 926
Query: 233 VFVITVKLSPLQRKLYKRFLDVHGFTNVRAHHEQLRKRSFFAGYQALARIWNHPGILQLT 292
++ V+L+ +Q + Y+ L + +R + + ++S L ++ NHP ++ T
Sbjct: 927 ERMVPVELTSIQAEYYRAML-TKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT 985
Query: 293 KEEKERVRHEDAVENFLVXXXXXXXXXXXXVLAGEKMKETNQFMPRKDGDGFFVKGWWND 352
+ E + FL + A K+
Sbjct: 986 EPESGSLE-------FL---------HDMRIKASAKLT---------------------- 1007
Query: 353 LLHGKIYKELDQSGKMVLLIDILTMSSDVGDKVLVFSQSIPTLDLIELYLSRIPRRGKQG 412
LLH + K L + G VL +FSQ LD++E YL+
Sbjct: 1008 LLHS-MLKVLHKEGHRVL----------------IFSQMTKLLDILEDYLN--------- 1041
Query: 413 KLWKKGKDWYRLDGRTESSERQKLVEKFNEPLNRRVKCTLISTRAGSLGINLHAANRVVI 472
+ K + R+DG ++RQ + +FN+ NR V L+STRA LGINL A+ V+I
Sbjct: 1042 -IEFGPKTFERVDGSVAVADRQAAIARFNQDKNRFV--FLLSTRACGLGINLATADTVII 1098
Query: 473 VDGSWNPTYDLQAIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVVDRQQ 532
D +NP D+QA+ RA R GQ K + YRL+ ++EE+I Q+ K+ L ++D+
Sbjct: 1099 YDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERIL--QLAKKKL---MLDQLF 1153
Query: 533 VHRTISKEEMLHLFEFGDDE 552
V+++ S++E + +G +E
Sbjct: 1154 VNKSGSQKEFEDILRWGTEE 1173
>AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3574
Length = 3574
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 151/543 (27%), Positives = 223/543 (41%), Gaps = 116/543 (21%)
Query: 1 MGLGKTFQVIAFLYTAMRSV-DLGLRTALIVTPVNVLHNWRREFIKWAPSELTPLRIFML 59
MGLGKT QVI+ + M + D G L+V P +VL W+ E WAPS + +
Sbjct: 781 MGLGKTVQVISLICYLMETKNDRG--PFLVVVPSSVLPGWQSEINFWAPS----IHKIVY 834
Query: 60 EDVPRDRRAHLLAKW-RAKGGVFLIGYSAFRNLSFGKNVKDRHMARETCRALQDGPDI-- 116
P +RR + K V L Y N +H D P +
Sbjct: 835 CGTPDERRKLFKEQIVHQKFNVLLTTYEYLMN---------KH----------DRPKLSK 875
Query: 117 -----LVCDEAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 171
++ DE H IKN + LK R+ LTG+PLQNNL E + +++F+
Sbjct: 876 IHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLTGTPLQNNLEELWALLNFLLPNIF 935
Query: 172 GSSHEFRNRFQNPIE-NGQHTNSTQT-----DVKIMNQRSHILYEELKGFVQRMDMNVVK 225
SS +F F P + NG+ + ++ I+N+ L++ L+ FV R + V+
Sbjct: 936 NSSEDFSQWFNKPFQSNGESSAEEALLSEEENLLIINR----LHQVLRPFVLRRLKHKVE 991
Query: 226 KDLPPKTVFVITVKLSPLQRKLYKRFLDVHGFTNVRAHHEQLRKRSFFAGYQALARIWNH 285
+LP K +I + S Q+ L KR D G + R+ L I NH
Sbjct: 992 NELPEKIERLIRCEASAYQKLLMKRVEDNLGSIG------NAKSRAVHNSVMELRNICNH 1045
Query: 286 PGILQLTKEEKERVRHEDAVENFLVXXXXXXXXXXXXVLAGEKMKETNQFMPRKDGDGFF 345
P + QL H + V N + F+P
Sbjct: 1046 PYLSQL---------HSEEVNNII----------------------PKHFLPP------I 1068
Query: 346 VKGWWNDLLHGKIYKELDQSGKMVLLIDILTMSSDVGDKVLVFSQSIPTLDLIELYLSRI 405
V+ GK+ +L +L +VL FS LD++E YL+
Sbjct: 1069 VRLC----------------GKLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTL- 1111
Query: 406 PRRGKQGKLWKKGKDWYRLDGRTESSERQKLVEKFNEPLNRRVKCTLISTRAGSLGINLH 465
KG + RLDG+T +R L++ FN+ L+S RAG +G+NL
Sbjct: 1112 -----------KGYKYLRLDGQTSGGDRGALIDGFNK-SGSPFFIFLLSIRAGGVGVNLQ 1159
Query: 466 AANRVVIVDGSWNPTYDLQAIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAA 525
AA+ V++ D WNP DLQA RA R GQKK V R ++EE++ K G+A
Sbjct: 1160 AADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVAN 1219
Query: 526 RVV 528
+ +
Sbjct: 1220 QSI 1222
>AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3543
Length = 3543
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 151/543 (27%), Positives = 223/543 (41%), Gaps = 116/543 (21%)
Query: 1 MGLGKTFQVIAFLYTAMRSV-DLGLRTALIVTPVNVLHNWRREFIKWAPSELTPLRIFML 59
MGLGKT QVI+ + M + D G L+V P +VL W+ E WAPS + +
Sbjct: 781 MGLGKTVQVISLICYLMETKNDRG--PFLVVVPSSVLPGWQSEINFWAPS----IHKIVY 834
Query: 60 EDVPRDRRAHLLAKW-RAKGGVFLIGYSAFRNLSFGKNVKDRHMARETCRALQDGPDI-- 116
P +RR + K V L Y N +H D P +
Sbjct: 835 CGTPDERRKLFKEQIVHQKFNVLLTTYEYLMN---------KH----------DRPKLSK 875
Query: 117 -----LVCDEAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 171
++ DE H IKN + LK R+ LTG+PLQNNL E + +++F+
Sbjct: 876 IHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLTGTPLQNNLEELWALLNFLLPNIF 935
Query: 172 GSSHEFRNRFQNPIE-NGQHTNSTQT-----DVKIMNQRSHILYEELKGFVQRMDMNVVK 225
SS +F F P + NG+ + ++ I+N+ L++ L+ FV R + V+
Sbjct: 936 NSSEDFSQWFNKPFQSNGESSAEEALLSEEENLLIINR----LHQVLRPFVLRRLKHKVE 991
Query: 226 KDLPPKTVFVITVKLSPLQRKLYKRFLDVHGFTNVRAHHEQLRKRSFFAGYQALARIWNH 285
+LP K +I + S Q+ L KR D G + R+ L I NH
Sbjct: 992 NELPEKIERLIRCEASAYQKLLMKRVEDNLGSIG------NAKSRAVHNSVMELRNICNH 1045
Query: 286 PGILQLTKEEKERVRHEDAVENFLVXXXXXXXXXXXXVLAGEKMKETNQFMPRKDGDGFF 345
P + QL H + V N + F+P
Sbjct: 1046 PYLSQL---------HSEEVNNII----------------------PKHFLPP------I 1068
Query: 346 VKGWWNDLLHGKIYKELDQSGKMVLLIDILTMSSDVGDKVLVFSQSIPTLDLIELYLSRI 405
V+ GK+ +L +L +VL FS LD++E YL+
Sbjct: 1069 VRLC----------------GKLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTL- 1111
Query: 406 PRRGKQGKLWKKGKDWYRLDGRTESSERQKLVEKFNEPLNRRVKCTLISTRAGSLGINLH 465
KG + RLDG+T +R L++ FN+ L+S RAG +G+NL
Sbjct: 1112 -----------KGYKYLRLDGQTSGGDRGALIDGFNK-SGSPFFIFLLSIRAGGVGVNLQ 1159
Query: 466 AANRVVIVDGSWNPTYDLQAIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAA 525
AA+ V++ D WNP DLQA RA R GQKK V R ++EE++ K G+A
Sbjct: 1160 AADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVAN 1219
Query: 526 RVV 528
+ +
Sbjct: 1220 QSI 1222
>AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3529
Length = 3529
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 151/543 (27%), Positives = 223/543 (41%), Gaps = 116/543 (21%)
Query: 1 MGLGKTFQVIAFLYTAMRSV-DLGLRTALIVTPVNVLHNWRREFIKWAPSELTPLRIFML 59
MGLGKT QVI+ + M + D G L+V P +VL W+ E WAPS + +
Sbjct: 781 MGLGKTVQVISLICYLMETKNDRG--PFLVVVPSSVLPGWQSEINFWAPS----IHKIVY 834
Query: 60 EDVPRDRRAHLLAKW-RAKGGVFLIGYSAFRNLSFGKNVKDRHMARETCRALQDGPDI-- 116
P +RR + K V L Y N +H D P +
Sbjct: 835 CGTPDERRKLFKEQIVHQKFNVLLTTYEYLMN---------KH----------DRPKLSK 875
Query: 117 -----LVCDEAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 171
++ DE H IKN + LK R+ LTG+PLQNNL E + +++F+
Sbjct: 876 IHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLTGTPLQNNLEELWALLNFLLPNIF 935
Query: 172 GSSHEFRNRFQNPIE-NGQHTNSTQT-----DVKIMNQRSHILYEELKGFVQRMDMNVVK 225
SS +F F P + NG+ + ++ I+N+ L++ L+ FV R + V+
Sbjct: 936 NSSEDFSQWFNKPFQSNGESSAEEALLSEEENLLIINR----LHQVLRPFVLRRLKHKVE 991
Query: 226 KDLPPKTVFVITVKLSPLQRKLYKRFLDVHGFTNVRAHHEQLRKRSFFAGYQALARIWNH 285
+LP K +I + S Q+ L KR D G + R+ L I NH
Sbjct: 992 NELPEKIERLIRCEASAYQKLLMKRVEDNLGSIG------NAKSRAVHNSVMELRNICNH 1045
Query: 286 PGILQLTKEEKERVRHEDAVENFLVXXXXXXXXXXXXVLAGEKMKETNQFMPRKDGDGFF 345
P + QL H + V N + F+P
Sbjct: 1046 PYLSQL---------HSEEVNNII----------------------PKHFLPP------I 1068
Query: 346 VKGWWNDLLHGKIYKELDQSGKMVLLIDILTMSSDVGDKVLVFSQSIPTLDLIELYLSRI 405
V+ GK+ +L +L +VL FS LD++E YL+
Sbjct: 1069 VRLC----------------GKLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTL- 1111
Query: 406 PRRGKQGKLWKKGKDWYRLDGRTESSERQKLVEKFNEPLNRRVKCTLISTRAGSLGINLH 465
KG + RLDG+T +R L++ FN+ L+S RAG +G+NL
Sbjct: 1112 -----------KGYKYLRLDGQTSGGDRGALIDGFNK-SGSPFFIFLLSIRAGGVGVNLQ 1159
Query: 466 AANRVVIVDGSWNPTYDLQAIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAA 525
AA+ V++ D WNP DLQA RA R GQKK V R ++EE++ K G+A
Sbjct: 1160 AADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVAN 1219
Query: 526 RVV 528
+ +
Sbjct: 1220 QSI 1222
>AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 |
chr1:1618795-1623195 REVERSE LENGTH=1410
Length = 1410
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 145/561 (25%), Positives = 239/561 (42%), Gaps = 109/561 (19%)
Query: 2 GLGKTFQVIAFLYTAMRSVDLGLRTALIVTPVNVLHNWRREFIKWAPS------------ 49
G GKT I FL ++ +I+ P ++L W EF KW S
Sbjct: 866 GTGKTRLTIIFLQAYLQC--FPDCKPVIIAPASLLLTWAEEFKKWNISIPFHNLSSLDFT 923
Query: 50 ---ELTPLRIFMLEDVP----RDRRAHLLAKWRAKGGVFLIGYSAFRNLSFGKNV-KDRH 101
L + M ++ + R + W + I Y+ + L+ K+ K
Sbjct: 924 GKENSAALGLLMQKNATARSNNEIRMVKIYSWIKSKSILGISYNLYEKLAGVKDEDKKTK 983
Query: 102 MARETC---------RALQDGPDILVCDEAHMIKNTKADVTQALKQVKCQRRIALTGSPL 152
M RE L P +LV DEAH +N ++ + + L +V+ Q+RI L+G+P
Sbjct: 984 MVREVKPDKELDDIREILMGRPGLLVLDEAHTPRNQRSCIWKTLSKVETQKRILLSGTPF 1043
Query: 153 QNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTQTDVKIMNQRSHILYEEL 212
QNN +E ++ R +L R + ++ T + + + N+ ++ EEL
Sbjct: 1044 QNNFLELCNVLGLARPKYL-------ERLTSTLKKSGMTVTKRGKKNLGNEINNRGIEEL 1096
Query: 213 KG----FVQRMDMNVVKKDLPPKTVFVITVKLSPLQRKLYKRFLDVHGFTNVRAHHEQLR 268
K FV ++++ LP V+ + LQR++ + H +
Sbjct: 1097 KAVMLPFVHVHKGSILQSSLPGLRECVVVLNPPELQRRVLESIEVTHN----------RK 1146
Query: 269 KRSFFAGYQALARIWNHPGILQLTK-EEKERVRHEDAVENFLVXXXXXXXXXXXXVLAGE 327
++ F L+ + HP ++ K EKER+ ++A+ LA
Sbjct: 1147 TKNVFETEHKLSLVSVHPSLVSRCKISEKERLSIDEAL------------------LAQL 1188
Query: 328 KMKETNQFMPRKDGDGFFVKGWWNDLLHGKIYKELDQSGKMVLLIDILTMSSDVGDKVLV 387
K K+ + +QS K L++ + + + +KVLV
Sbjct: 1189 K----------------------------KVRLDPNQSVKTRFLMEFVELCEVIKEKVLV 1220
Query: 388 FSQSIPTLDLIELYL-SRIPRRGKQGKLWKKGKDWYRLDGRTESSERQKLVEKFNEPLNR 446
FSQ I L LI +L SR W G++ + G+ E +RQ L+ +FN+P
Sbjct: 1221 FSQYIDPLKLIMKHLVSRFK--------WNPGEEVLYMHGKLEQKQRQTLINEFNDP-KS 1271
Query: 447 RVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQAIYRAWRYGQKKPVFAYRLLAH 506
+ K L ST+A S GI+L A+RV+++D WNP + QAI RA+R GQK+ V+ Y L+A
Sbjct: 1272 KAKVFLASTKACSEGISLVGASRVILLDVVWNPAVERQAISRAYRIGQKRIVYTYHLVAK 1331
Query: 507 GTMEEKIYKRQVTKEGLAARV 527
GT E Y +Q K+ ++ V
Sbjct: 1332 GTPEGPKYCKQAQKDRISELV 1352
>AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:523481-526884 FORWARD LENGTH=763
Length = 763
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 149/552 (26%), Positives = 236/552 (42%), Gaps = 78/552 (14%)
Query: 1 MGLGKTFQVIAFLYTAMRSVDLGLRTALIVTPVNVLHNWRREFIKWAPSELTPLRIFMLE 60
MGLGKT Q I +L T + ++ L+V P +VL NW RE KW PS T L+
Sbjct: 241 MGLGKTIQAITYL-TLLSRLNNDPGPHLVVCPASVLENWERELRKWCPS-FTVLQYHGAA 298
Query: 61 DVPRDRRAHLLAKWRAKG--GVFLIGYSAFRNLSFGKNVKDRHMA---RETCRALQDGPD 115
R + L+K V L+ YS F S + DR + R +C
Sbjct: 299 RAAYSRELNSLSKAGKPPPFNVLLVCYSLFERHS-EQQKDDRKVLKRWRWSC-------- 349
Query: 116 ILVCDEAHMIKNTKADVTQALKQV--KCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGS 173
++ DEAH +K+ + + L V +R+ LTG+PLQN+L E + +++F+ +
Sbjct: 350 -VLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMLPDIFTT 408
Query: 174 SHEFRNRFQNPIENGQHTNSTQTDVKIMNQRSHILYEELKGFVQRMDMNVVKKDLPPKTV 233
+ + N D +++ + IL F+ R + V + L PK
Sbjct: 409 ENVDLKKLLNA-----------EDTELITRMKSIL----GPFILRRLKSDVMQQLVPKIQ 453
Query: 234 FVITVKLSPLQRKLYKRFLDVH-----------GFTNVRAHHEQLRKRSFFAGYQALARI 282
V V + Q YK ++ + ++ + + L KR + +I
Sbjct: 454 RVEYVLMERKQEDAYKEAIEEYRAASQARLVKLSSKSLNSLAKALPKRQISNYFTQFRKI 513
Query: 283 WNHPGILQLTKEEKERVR-----HEDAVENFLVXXXXXXXXXXXXVLAGEKMKETNQFMP 337
NHP +++ +++ +R H F E++K N F
Sbjct: 514 ANHPLLIRRIYSDEDVIRIARKLHPIGAFGFECSLDRVI----------EEVKGFNDFRI 563
Query: 338 RKDGDGFFVKGWWNDLLHGKIYKELDQSGKMVLLIDILTMSSDVGDKVLVFSQSIPTLDL 397
+ + ND K + S K L ++L G +VL+FSQ LD+
Sbjct: 564 HQ----LLFQYGVNDTKGTLSDKHVMLSAKCRTLAELLPSMKKSGHRVLIFSQWTSMLDI 619
Query: 398 IELYLSRIPRRGKQGKLWKKGKDWYRLDGRTESSERQKLVEKFNEPLNRRVKCTLISTRA 457
+E L I G + RLDG T+ ++RQ +V+ FN ++ + L+STRA
Sbjct: 620 LEWTLDVI------------GVTYRRLDGSTQVTDRQTIVDTFNN--DKSIFACLLSTRA 665
Query: 458 GSLGINLHAANRVVIVDGSWNPTYDLQAIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQ 517
G G+NL A+ V+I D +NP D QA R R GQ KPV +RL+ T++E IY+
Sbjct: 666 GGQGLNLTGADTVIIHDMDFNPQIDRQAEDRCHRIGQTKPVTIFRLVTKSTVDENIYEIA 725
Query: 518 VTKEGLAARVVD 529
K L A V++
Sbjct: 726 KRKLVLDAAVLE 737
>AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 |
chr2:8129154-8133502 FORWARD LENGTH=1187
Length = 1187
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 114/216 (52%), Gaps = 14/216 (6%)
Query: 359 YKELDQSGKMVLLIDILTMSSDVGDKVLVFSQSIPTLDLIELYLSRIPRRGKQGKLWKKG 418
Y ++SGKM ++ ++L + G +VL+FSQ+ LD++E +L
Sbjct: 720 YGNPERSGKMKVVAEVLKVWKQQGHRVLLFSQTQQMLDILESFLV------------ANE 767
Query: 419 KDWYRLDGRTESSERQKLVEKFNEPLNRRVKCTLISTRAGSLGINLHAANRVVIVDGSWN 478
+ R+DG T +R L+++FN + V +++T+ G LG NL ANRV+I D WN
Sbjct: 768 YSYRRMDGLTPVKQRMALIDEFNNSEDMFV--FVLTTKVGGLGTNLTGANRVIIFDPDWN 825
Query: 479 PTYDLQAIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTIS 538
P+ D+QA RAWR GQKK V YRL+ GT+EEK+Y RQ+ K L +++ Q R
Sbjct: 826 PSNDMQARERAWRIGQKKDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQRRFFK 885
Query: 539 KEEMLHLFEFGDDENPETLAELDQENGHTCDQINPI 574
+M LF DD + E ++IN +
Sbjct: 886 ARDMKDLFILKDDGDSNASTETSNIFSQLAEEINIV 921
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 138/330 (41%), Gaps = 71/330 (21%)
Query: 1 MGLGKTFQVIAFL----YTAMRSVDLGLRTALIVTPVNVLHNWRREFIKWAPSELTPLRI 56
MGLGKT QV++FL ++ M + ++I+ PV +L WRRE KW P +
Sbjct: 412 MGLGKTIQVLSFLGSLHFSKM------YKPSIIICPVTLLRQWRREAQKWYPD----FHV 461
Query: 57 FMLEDVPRDR--------------------------RAHLLAKW--------RAKGGVFL 82
+L D +D ++ KW ++ G+ +
Sbjct: 462 EILHDSAQDSGHGKGQGKASESDYDSESSVDSDHEPKSKNTKKWDSLLNRVLNSESGLLI 521
Query: 83 IGYSAFRNLSFGKNVKDRHMARETCRALQDGPDILVCDEAHMIKNTKADVTQALKQVKCQ 142
Y R + E ++ G +L DE H I+N +D+T KQ++
Sbjct: 522 TTYEQLR------------LQGEKLLNIEWGYAVL--DEGHRIRNPNSDITLVCKQLQTV 567
Query: 143 RRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTQTDVKIMN 202
RI +TG+P+QN L E + + DFV G LG F F PI G + N++ V
Sbjct: 568 HRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFSVPITVGGYANASPLQVSTAY 627
Query: 203 QRSHILYEELKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRKLYKRFLDVHGFTNVRA 262
+ + +L + + ++ R V L KT V+ L+ QR Y+ FL +
Sbjct: 628 RCAVVLRDLIMPYLLRRMKADVNAHLTKKTEHVLFCSLTVEQRSTYRAFL-------ASS 680
Query: 263 HHEQL--RKRSFFAGYQALARIWNHPGILQ 290
EQ+ R+ G + +I NHP +L+
Sbjct: 681 EVEQIFDGNRNSLYGIDVMRKICNHPDLLE 710
>AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin
remodeling factor CHD3 (PICKLE) | chr2:10714411-10723763
FORWARD LENGTH=1384
Length = 1384
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 112/206 (54%), Gaps = 17/206 (8%)
Query: 362 LDQSGKMVLLIDILTMSSDVGDKVLVFSQSIPTLDLIELYLSRIPRRGKQGKLWKKGKDW 421
L+ GK+ LL ++ + G +VL+++Q LDL+E Y + K W+ +
Sbjct: 591 LESCGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCTH--------KKWQ----Y 638
Query: 422 YRLDGRTESSERQKLVEKFNEPLNRRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTY 481
R+DG+ +ERQ +++FN N C L+STRAG LGINL A+ V+I D WNP
Sbjct: 639 ERIDGKVGGAERQIRIDRFNAK-NSNKFCFLLSTRAGGLGINLATADTVIIYDSDWNPHA 697
Query: 482 DLQAIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEE 541
DLQA+ RA R GQ V YRL+ GT+EE++ + K L VV + + + I++EE
Sbjct: 698 DLQAMARAHRLGQTNKVMIYRLINRGTIEERMMQLTKKKMVLEHLVVGKLKT-QNINQEE 756
Query: 542 MLHLFEFGDDENPETLAELDQENGHT 567
+ + +G + E A D E G +
Sbjct: 757 LDDIIRYG---SKELFASEDDEAGKS 779
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 117/261 (44%), Gaps = 36/261 (13%)
Query: 1 MGLGKTFQVIAFLYTAMRSVDLGLRTALIVTPVNVLHNWRREFIKWAPSELTPLRIFMLE 60
MGLGKT Q IA L + L L++ P++ L NW REF WAP + + M
Sbjct: 300 MGLGKTIQSIALLASLFEE---NLIPHLVIAPLSTLRNWEREFATWAPQ----MNVVMYF 352
Query: 61 DVPRDR---RAH--LLAKWRAKGGVFLIGY----SAFRNLSFGKNVKDRHMARETCRALQ 111
+ R R H L+K + K G S + + F + M L+
Sbjct: 353 GTAQARAVIREHEFYLSKDQKKIKKKKSGQISSESKQKRIKFDVLLTSYEMINLDSAVLK 412
Query: 112 DGP-DILVCDEAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGF 170
+ ++ DE H +KN + + +L Q RI LTG+PLQNNL E + ++ F+ G
Sbjct: 413 PIKWECMIVDEGHRLKNKDSKLFSSLTQYSSNHRILLTGTPLQNNLDELFMLMHFLDAGK 472
Query: 171 LGSSHEFRNRFQNPIENGQHTNSTQTDVKIMNQRSHI--LYEELKGFVQRMDMNVVKKDL 228
GS EF+ F++ +NQ I L++ L + R V KD+
Sbjct: 473 FGSLEEFQEEFKD-----------------INQEEQISRLHKMLAPHLLRRVKKDVMKDM 515
Query: 229 PPKTVFVITVKLSPLQRKLYK 249
PPK ++ V LS LQ++ YK
Sbjct: 516 PPKKELILRVDLSSLQKEYYK 536
>AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1055
Length = 1055
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 104/187 (55%), Gaps = 15/187 (8%)
Query: 365 SGKMVLLIDILTMSSDVGDKVLVFSQSIPTLDLIELYLSRIPRRGKQGKLWKKGKDWYRL 424
+GKMVLL +L + +VL+FSQ LD++E YL +G + R+
Sbjct: 489 AGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYL------------MYRGYLYCRI 536
Query: 425 DGRTESSERQKLVEKFNEPLNRRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQ 484
DG T ER +E +N+P + + L+STRAG LGINL A+ V++ D WNP DLQ
Sbjct: 537 DGNTGGDERDASIEAYNKPGSEKF-VFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQ 595
Query: 485 AIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEEM 542
A RA R GQKK V +R +EEK+ +R K L A V+ + ++ +T++K+E+
Sbjct: 596 AQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDEL 655
Query: 543 LHLFEFG 549
L + +G
Sbjct: 656 LQMVRYG 662
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 127/292 (43%), Gaps = 38/292 (13%)
Query: 1 MGLGKTFQVIAFLYT--AMRSVDLGLRTALIVTPVNVLHNWRREFIKWAPSELTPLRIFM 58
MGLGKT Q I+ L R ++ ++V P + L NW E ++ P LR
Sbjct: 216 MGLGKTLQTISLLAYLHEYRGIN---GPHMVVAPKSTLGNWMNEIRRFCPV----LRAVK 268
Query: 59 LEDVPRDRRAHLLAKWRAKGGVFLIGYSAFRNLSFGKNVKDRHMARETCRALQDGPDILV 118
P +RR H+ G F I ++F K R R ++
Sbjct: 269 FLGNPEERR-HIREDLLV-AGKFDICVTSFEMAIKEKTALRRFSWR-----------YII 315
Query: 119 CDEAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFR 178
DEAH IKN + +++ ++ R+ +TG+PLQNNL E + +++F+ S+ F
Sbjct: 316 IDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFLLPEIFSSAETFD 375
Query: 179 NRFQNPIENGQHTNSTQTDVKIMNQRSHILYEELKGFVQRMDMNVVKKDLPPKTVFVITV 238
FQ EN Q Q L++ L+ F+ R + V+K LPPK ++ V
Sbjct: 376 EWFQISGENDQQEVVQQ------------LHKVLRPFLLRRLKSDVEKGLPPKKETILKV 423
Query: 239 KLSPLQRKLYKRFLDVHGFTNVRAHHEQLRKRSFFAGYQALARIWNHPGILQ 290
+S +Q++ YK L V A E RKR Q L + NHP + Q
Sbjct: 424 GMSQMQKQYYKALLQ-KDLEAVNAGGE--RKRLLNIAMQ-LRKCCNHPYLFQ 471
>AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1057
Length = 1057
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 104/187 (55%), Gaps = 15/187 (8%)
Query: 365 SGKMVLLIDILTMSSDVGDKVLVFSQSIPTLDLIELYLSRIPRRGKQGKLWKKGKDWYRL 424
+GKMVLL +L + +VL+FSQ LD++E YL +G + R+
Sbjct: 489 AGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYL------------MYRGYLYCRI 536
Query: 425 DGRTESSERQKLVEKFNEPLNRRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQ 484
DG T ER +E +N+P + + L+STRAG LGINL A+ V++ D WNP DLQ
Sbjct: 537 DGNTGGDERDASIEAYNKPGSEKF-VFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQ 595
Query: 485 AIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEEM 542
A RA R GQKK V +R +EEK+ +R K L A V+ + ++ +T++K+E+
Sbjct: 596 AQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDEL 655
Query: 543 LHLFEFG 549
L + +G
Sbjct: 656 LQMVRYG 662
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 127/292 (43%), Gaps = 38/292 (13%)
Query: 1 MGLGKTFQVIAFLYT--AMRSVDLGLRTALIVTPVNVLHNWRREFIKWAPSELTPLRIFM 58
MGLGKT Q I+ L R ++ ++V P + L NW E ++ P LR
Sbjct: 216 MGLGKTLQTISLLAYLHEYRGIN---GPHMVVAPKSTLGNWMNEIRRFCPV----LRAVK 268
Query: 59 LEDVPRDRRAHLLAKWRAKGGVFLIGYSAFRNLSFGKNVKDRHMARETCRALQDGPDILV 118
P +RR H+ G F I ++F K R R ++
Sbjct: 269 FLGNPEERR-HIREDLLV-AGKFDICVTSFEMAIKEKTALRRFSWR-----------YII 315
Query: 119 CDEAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFR 178
DEAH IKN + +++ ++ R+ +TG+PLQNNL E + +++F+ S+ F
Sbjct: 316 IDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFLLPEIFSSAETFD 375
Query: 179 NRFQNPIENGQHTNSTQTDVKIMNQRSHILYEELKGFVQRMDMNVVKKDLPPKTVFVITV 238
FQ EN Q Q L++ L+ F+ R + V+K LPPK ++ V
Sbjct: 376 EWFQISGENDQQEVVQQ------------LHKVLRPFLLRRLKSDVEKGLPPKKETILKV 423
Query: 239 KLSPLQRKLYKRFLDVHGFTNVRAHHEQLRKRSFFAGYQALARIWNHPGILQ 290
+S +Q++ YK L V A E RKR Q L + NHP + Q
Sbjct: 424 GMSQMQKQYYKALLQ-KDLEAVNAGGE--RKRLLNIAMQ-LRKCCNHPYLFQ 471
>AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1056
Length = 1056
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 104/187 (55%), Gaps = 15/187 (8%)
Query: 365 SGKMVLLIDILTMSSDVGDKVLVFSQSIPTLDLIELYLSRIPRRGKQGKLWKKGKDWYRL 424
+GKMVLL +L + +VL+FSQ LD++E YL +G + R+
Sbjct: 489 AGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYL------------MYRGYLYCRI 536
Query: 425 DGRTESSERQKLVEKFNEPLNRRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQ 484
DG T ER +E +N+P + + L+STRAG LGINL A+ V++ D WNP DLQ
Sbjct: 537 DGNTGGDERDASIEAYNKPGSEKF-VFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQ 595
Query: 485 AIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEEM 542
A RA R GQKK V +R +EEK+ +R K L A V+ + ++ +T++K+E+
Sbjct: 596 AQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDEL 655
Query: 543 LHLFEFG 549
L + +G
Sbjct: 656 LQMVRYG 662
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 127/292 (43%), Gaps = 38/292 (13%)
Query: 1 MGLGKTFQVIAFLYT--AMRSVDLGLRTALIVTPVNVLHNWRREFIKWAPSELTPLRIFM 58
MGLGKT Q I+ L R ++ ++V P + L NW E ++ P LR
Sbjct: 216 MGLGKTLQTISLLAYLHEYRGIN---GPHMVVAPKSTLGNWMNEIRRFCPV----LRAVK 268
Query: 59 LEDVPRDRRAHLLAKWRAKGGVFLIGYSAFRNLSFGKNVKDRHMARETCRALQDGPDILV 118
P +RR H+ G F I ++F K R R ++
Sbjct: 269 FLGNPEERR-HIREDLLV-AGKFDICVTSFEMAIKEKTALRRFSWR-----------YII 315
Query: 119 CDEAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFR 178
DEAH IKN + +++ ++ R+ +TG+PLQNNL E + +++F+ S+ F
Sbjct: 316 IDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFLLPEIFSSAETFD 375
Query: 179 NRFQNPIENGQHTNSTQTDVKIMNQRSHILYEELKGFVQRMDMNVVKKDLPPKTVFVITV 238
FQ EN Q Q L++ L+ F+ R + V+K LPPK ++ V
Sbjct: 376 EWFQISGENDQQEVVQQ------------LHKVLRPFLLRRLKSDVEKGLPPKKETILKV 423
Query: 239 KLSPLQRKLYKRFLDVHGFTNVRAHHEQLRKRSFFAGYQALARIWNHPGILQ 290
+S +Q++ YK L V A E RKR Q L + NHP + Q
Sbjct: 424 GMSQMQKQYYKALLQ-KDLEAVNAGGE--RKRLLNIAMQ-LRKCCNHPYLFQ 471
>AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 |
chr2:5544601-5555543 REVERSE LENGTH=1724
Length = 1724
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 106/198 (53%), Gaps = 13/198 (6%)
Query: 355 HGKIYKELDQSGKMVLLIDILTMSSDVGDKVLVFSQSIPTLDLIELYLSRIPRRGKQGKL 414
+ K+ K + SGK+V+L +L + +VL+FSQ + LD++ YLS
Sbjct: 928 NSKLDKIILSSGKLVILDKLLVRLRETKHRVLIFSQMVRMLDILAEYLSL---------- 977
Query: 415 WKKGKDWYRLDGRTESSERQKLVEKFNEPLNRRVKCTLISTRAGSLGINLHAANRVVIVD 474
+G + RLDG T++ RQ+ ++ FN P + C L+STRAG LGINL A+ VVI D
Sbjct: 978 --RGFQFQRLDGSTKAELRQQAMDHFNAPASDDF-CFLLSTRAGGLGINLATADTVVIFD 1034
Query: 475 GSWNPTYDLQAIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVVDRQQVH 534
WNP DLQA+ RA R GQ++ V YR + ++EE+I +R K L V+ +
Sbjct: 1035 SDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEEILERAKRKMVLDHLVIQKLNAE 1094
Query: 535 RTISKEEMLHLFEFGDDE 552
+ K E F +E
Sbjct: 1095 GRLEKRETKKGSNFDKNE 1112
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 121/260 (46%), Gaps = 38/260 (14%)
Query: 1 MGLGKTFQVIAFLYTAMRSVDLGLRTALIVTPVNVLHNWRREFIKWAPSELTPLRIFMLE 60
MGLGKT Q ++ L +++ L+V P++ L NW +EF KW P + I +
Sbjct: 652 MGLGKTVQSVSML-GFLQNTQQIPGPFLVVVPLSTLANWAKEFRKWLPG----MNIIVYV 706
Query: 61 DVPRDRRAHLLAKWRAKGGVFLIGYSAFRNLSFGKNVKDRHMARETCRALQDGPDI---- 116
R Y + G+ +K + L+D +
Sbjct: 707 GTRASREV-------------CQQYEFYNEKKVGRPIKFNALLTTYEVVLKDKAVLSKIK 753
Query: 117 ---LVCDEAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGS 173
L+ DEAH +KN++A + AL + + ++ +TG+PLQN++ E + ++ F+ G +
Sbjct: 754 WIYLMVDEAHRLKNSEAQLYTALLEFSTKNKLLITGTPLQNSVEELWALLHFLDPGKFKN 813
Query: 174 SHEFRNRFQNPIENGQHTNSTQTDVKIMNQRSHILYEELKGFVQRMDMNVVKKDLPPKTV 233
EF ++N S+ + ++ N L+ EL+ + R + V+K LPPK
Sbjct: 814 KDEFVENYKNL--------SSFNESELAN-----LHLELRPHILRRVIKDVEKSLPPKIE 860
Query: 234 FVITVKLSPLQRKLYKRFLD 253
++ V++SPLQ++ YK L+
Sbjct: 861 RILRVEMSPLQKQYYKWILE 880
>AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr3:4065636-4073992 FORWARD LENGTH=2055
Length = 2055
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 139/294 (47%), Gaps = 34/294 (11%)
Query: 1 MGLGKTFQVIAFLYTAMRSVDLGL-RTALIVTPVNVLHNWRREFIKWAPSELTPLRIFML 59
MGLGKT IA L A + D G+ LIV P +V+ NW EF+KW P+ +I
Sbjct: 563 MGLGKTIMTIALL--AHLACDKGIWGPHLIVVPTSVMLNWETEFLKWCPA----FKILTY 616
Query: 60 EDVPRDRRAHLLAKWRAKGGVFLIGYSAFRNLSFGKNVKDRHMARETCRALQDGPDILVC 119
++R+ L + K F + + +R + ++D M + + L+
Sbjct: 617 FGSAKERK--LKRQGWMKLNSFHVCITTYRLV-----IQDSKMFK------RKKWKYLIL 663
Query: 120 DEAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 179
DEAH+IKN K+ Q L +RRI LTG+PLQN+LME + ++ F+ S EF++
Sbjct: 664 DEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKD 723
Query: 180 RFQNPIENGQHTNSTQTDVKIMNQRSHILYEELKGFVQRMDMNVVKKDLPPKTVFVITVK 239
F NPI + KI + L+ L+ F+ R V+K LP K VI +
Sbjct: 724 WFCNPI-----AGMVEGQEKINKEVIDRLHNVLRPFLLRRLKRDVEKQLPSKHEHVIFCR 778
Query: 240 LSPLQRKLYKRFLDVHGFTNVRAHHEQLRKRSFFAGYQ---ALARIWNHPGILQ 290
LS QR LY+ F+ T +A L SFF L ++ NHP + +
Sbjct: 779 LSKRQRNLYEDFI---ASTETQA---TLTSGSFFGMISIIMQLRKVCNHPDLFE 826
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 79/147 (53%), Gaps = 14/147 (9%)
Query: 382 GDKVLVFSQSIPTLDLIELYLSRIPRRGKQGKLWKKGKDWYRLDGRTESSERQKLVEKFN 441
G + L+F+Q LD++E +++ G + RLDG T ERQ L+++FN
Sbjct: 1091 GHRALIFTQMTKMLDVLEAFINLY------------GYTYMRLDGSTPPEERQTLMQRFN 1138
Query: 442 EPLNRRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQAIYRAWRYGQKKPVFAY 501
N ++ ++STR+G +GINL A+ V+ D WNP D QA R R GQ + V Y
Sbjct: 1139 --TNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIY 1196
Query: 502 RLLAHGTMEEKIYKRQVTKEGLAARVV 528
RL++ T+EE I K+ K L V+
Sbjct: 1197 RLISESTIEENILKKANQKRVLDNLVI 1223
>AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1069
Length = 1069
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 103/187 (55%), Gaps = 15/187 (8%)
Query: 365 SGKMVLLIDILTMSSDVGDKVLVFSQSIPTLDLIELYLSRIPRRGKQGKLWKKGKDWYRL 424
+GKMVLL +L D +VL+FSQ LD++E YL +G + R+
Sbjct: 494 AGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYL------------MYRGYQYCRI 541
Query: 425 DGRTESSERQKLVEKFNEPLNRRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQ 484
DG T ER +E +N+P + + L+STRAG LGINL A+ V++ D WNP DLQ
Sbjct: 542 DGNTGGDERDASIEAYNKPGSEKF-VFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQ 600
Query: 485 AIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEEM 542
A RA R GQKK V +R +E K+ +R K L A V+ + ++ +T++K+E+
Sbjct: 601 AQDRAHRIGQKKEVQVFRFCTENAIEAKVIERAYKKLALDALVIQQGRLAEQKTVNKDEL 660
Query: 543 LHLFEFG 549
L + +G
Sbjct: 661 LQMVRYG 667
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 127/291 (43%), Gaps = 36/291 (12%)
Query: 1 MGLGKTFQVIAFLYTAMRSVDLGLRTA-LIVTPVNVLHNWRREFIKWAPSELTPLRIFML 59
MGLGKT Q I+ L A G+ ++V P + L NW E ++ P LR
Sbjct: 221 MGLGKTLQTISLL--AYLHEYRGINGPHMVVAPKSTLGNWMNEIRRFCPV----LRAVKF 274
Query: 60 EDVPRDRRAHLLAKWRAKGGVFLIGYSAFRNLSFGKNVKDRHMARETCRALQDGPDILVC 119
P +RR H+ + G F I ++F K R R ++
Sbjct: 275 LGNPEERR-HIREELLV-AGKFDICVTSFEMAIKEKTTLRRFSWR-----------YIII 321
Query: 120 DEAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 179
DEAH IKN + +++ ++ R+ +TG+PLQNNL E + +++F+ S+ F
Sbjct: 322 DEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFLLPEVFSSAETFDE 381
Query: 180 RFQNPIENGQHTNSTQTDVKIMNQRSHILYEELKGFVQRMDMNVVKKDLPPKTVFVITVK 239
FQ EN Q Q L++ L+ F+ R + V+K LPPK ++ V
Sbjct: 382 WFQISGENDQQEVVQQ------------LHKVLRPFLLRRLKSDVEKGLPPKKETILKVG 429
Query: 240 LSPLQRKLYKRFLDVHGFTNVRAHHEQLRKRSFFAGYQALARIWNHPGILQ 290
+S +Q++ YK L V E RKR Q L + NHP + Q
Sbjct: 430 MSQMQKQYYKALLQ-KDLEVVNGGGE--RKRLLNIAMQ-LRKCCNHPYLFQ 476
>AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1072
Length = 1072
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 103/187 (55%), Gaps = 15/187 (8%)
Query: 365 SGKMVLLIDILTMSSDVGDKVLVFSQSIPTLDLIELYLSRIPRRGKQGKLWKKGKDWYRL 424
+GKMVLL +L D +VL+FSQ LD++E YL +G + R+
Sbjct: 494 AGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYL------------MYRGYQYCRI 541
Query: 425 DGRTESSERQKLVEKFNEPLNRRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQ 484
DG T ER +E +N+P + + L+STRAG LGINL A+ V++ D WNP DLQ
Sbjct: 542 DGNTGGDERDASIEAYNKPGSEKF-VFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQ 600
Query: 485 AIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEEM 542
A RA R GQKK V +R +E K+ +R K L A V+ + ++ +T++K+E+
Sbjct: 601 AQDRAHRIGQKKEVQVFRFCTENAIEAKVIERAYKKLALDALVIQQGRLAEQKTVNKDEL 660
Query: 543 LHLFEFG 549
L + +G
Sbjct: 661 LQMVRYG 667
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 127/292 (43%), Gaps = 38/292 (13%)
Query: 1 MGLGKTFQVIAFLYT--AMRSVDLGLRTALIVTPVNVLHNWRREFIKWAPSELTPLRIFM 58
MGLGKT Q I+ L R ++ ++V P + L NW E ++ P LR
Sbjct: 221 MGLGKTLQTISLLAYLHEYRGIN---GPHMVVAPKSTLGNWMNEIRRFCPV----LRAVK 273
Query: 59 LEDVPRDRRAHLLAKWRAKGGVFLIGYSAFRNLSFGKNVKDRHMARETCRALQDGPDILV 118
P +RR H+ + G F I ++F K R R ++
Sbjct: 274 FLGNPEERR-HIREELLV-AGKFDICVTSFEMAIKEKTTLRRFSWR-----------YII 320
Query: 119 CDEAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFR 178
DEAH IKN + +++ ++ R+ +TG+PLQNNL E + +++F+ S+ F
Sbjct: 321 IDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFLLPEVFSSAETFD 380
Query: 179 NRFQNPIENGQHTNSTQTDVKIMNQRSHILYEELKGFVQRMDMNVVKKDLPPKTVFVITV 238
FQ EN Q Q L++ L+ F+ R + V+K LPPK ++ V
Sbjct: 381 EWFQISGENDQQEVVQQ------------LHKVLRPFLLRRLKSDVEKGLPPKKETILKV 428
Query: 239 KLSPLQRKLYKRFLDVHGFTNVRAHHEQLRKRSFFAGYQALARIWNHPGILQ 290
+S +Q++ YK L V E RKR Q L + NHP + Q
Sbjct: 429 GMSQMQKQYYKALLQ-KDLEVVNGGGE--RKRLLNIAMQ-LRKCCNHPYLFQ 476
>AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator |
chr3:1802435-1807284 REVERSE LENGTH=1102
Length = 1102
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 109/204 (53%), Gaps = 16/204 (7%)
Query: 344 FFVKGWWNDLLHGKIYKELDQSGKMVLLIDILTMSSDVGDKVLVFSQSIPTLDLIELYLS 403
FV G +N +I + SGK LL +L G ++L+FSQ +D++E+YL+
Sbjct: 694 LFVGGDYNMWKKPEIVR---ASGKFELLDRLLPKLRKAGHRILLFSQMTRLIDVLEIYLT 750
Query: 404 RIPRRGKQGKLWKKGKDWYRLDGRTESSERQKLVEKFNEPLNRRVKCTLISTRAGSLGIN 463
+ RLDG T++ +R L+++FNEP + L+STRAG LG+N
Sbjct: 751 L------------NDYKYLRLDGTTKTDQRGLLLKQFNEP-DSPYFMFLLSTRAGGLGLN 797
Query: 464 LHAANRVVIVDGSWNPTYDLQAIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGL 523
L A+ V+I D WNP D QA RA R GQKK V + L++ G++EE I +R K G+
Sbjct: 798 LQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSVEEVILERAKQKMGI 857
Query: 524 AARVVDRQQVHRTISKEEMLHLFE 547
A+V+ + T + ++ + E
Sbjct: 858 DAKVIQAGLFNTTSTAQDRREMLE 881
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 125/259 (48%), Gaps = 30/259 (11%)
Query: 1 MGLGKTFQVIAFLYTAMRSVDLGLRTALIVTPVNVLHNWRREFIKWAPSELTPLRIFMLE 60
MGLGKT Q I+ + + + + LIV P VL NW EF W PS + F+ +
Sbjct: 430 MGLGKTIQTISLIAYLLENKGVP-GPYLIVAPKAVLPNWVNEFATWVPS----IAAFLYD 484
Query: 61 DVPRDRRAHLLAKWRAKG--GVFLIGYS-AFRNLSFGKNVKDRHMARETCRALQDGPDIL 117
+R+A + K +G V + Y R+ +F K ++ +M
Sbjct: 485 GRLEERKA-IREKIAGEGKFNVLITHYDLIMRDKAFLKKIEWYYM--------------- 528
Query: 118 VCDEAHMIKNTKADVTQAL-KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 176
+ DE H +KN ++ + + L + +RR+ LTG+P+QN+L E + +++F+ S
Sbjct: 529 IVDEGHRLKNHESALAKTLLTGYRIKRRLLLTGTPIQNSLQELWSLLNFLLPHIFNSVQN 588
Query: 177 FRNRFQNPI-ENGQHTNSTQTDVKIMNQRSHILYEELKGFVQRMDMNVVKKDLPPKTVFV 235
F F P + G + + + ++ I+++ H+ ++ F+ R + V+K LP KT +
Sbjct: 589 FEEWFNAPFADRGNVSLTDEEELLIIHRLHHV----IRPFILRRKKDEVEKFLPGKTQVI 644
Query: 236 ITVKLSPLQRKLYKRFLDV 254
+ +S Q+ YK+ D+
Sbjct: 645 LKCDMSAWQKVYYKQVTDM 663
>AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552343-18556669
REVERSE LENGTH=877
Length = 877
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 139/561 (24%), Positives = 225/561 (40%), Gaps = 136/561 (24%)
Query: 1 MGLGKTFQVIAFL-YTAMRSVDLGLRTA-LIVTPVNVLHNWRREFIKWAPSELTPLRIF- 57
MGLGKT Q I+FL Y R GL L++ P++V W E ++ P+ L LR
Sbjct: 79 MGLGKTLQAISFLSYLKFRQ---GLPGPFLVLCPLSVTDGWVSEINRFTPN-LEVLRYVG 134
Query: 58 -----------MLEDVPRDRRAHLLAKWRAKGGVFLIGYS-AFRNLSFGKNVKDRHMARE 105
M + V + + H L V L Y A + F + ++
Sbjct: 135 DKYCRLDMRKSMYDHVKKSSKGHFLP-----FDVLLTTYDIALVDQDFLSQIPWQYA--- 186
Query: 106 TCRALQDGPDILVCDEAHMIKNTKADVTQAL-KQVKCQRRIALTGSPLQNNLMEYYCMVD 164
+ DEA +KN + + L +Q RR+ +TG+P+QNNL E + ++
Sbjct: 187 ------------IIDEAQRLKNPNSVLYNVLLEQFLIPRRLLITGTPIQNNLTELWALMH 234
Query: 165 FVREGFLGSSHEFRNRFQNPIENGQHTNSTQTDVKIMNQRSHILYEELK----GFVQRMD 220
F G+ +F + F + T + + + N + Y+ LK F+ R
Sbjct: 235 FCMPLVFGTLDQFLSAF-------KETGDGLSGLDVSNDKE--TYKSLKFILGAFMLRRT 285
Query: 221 MNVVKKD----LPPKTVFVITVKLSPLQRKLYKRFLDVHGFTNVRAHHEQLRKRSFFAGY 276
+++ + LPP T + V L LQ+K+Y LRK
Sbjct: 286 KSLLIESGNLVLPPLTELTVMVPLVSLQKKIYTSI---------------LRKE------ 324
Query: 277 QALARIWNHPGILQLTKEEKERVRHEDAVENFLVXXXXXXXXXXXXVLAGEKMKETNQFM 336
PG+L+L+ +++N ++ + G + +
Sbjct: 325 --------LPGLLELSSGGSNHT----SLQNIVI--QLRKACSHPYLFPGIEPE------ 364
Query: 337 PRKDGDGFFVKGWWNDLLHGKIYKELDQSGKMVLLIDILTMSSDVGDKVLVFSQSIPTLD 396
P ++G+ V+ L+ ++ K L SG VLL FSQ TLD
Sbjct: 365 PFEEGE-HLVQASGKLLVLDQLLKRLHDSGHRVLL----------------FSQMTSTLD 407
Query: 397 LIELYLSRIPRRGKQGKLWKKGKDWYRLDGRTESSERQKLVEKFNEPLNRRVKCT----- 451
+++ ++ RR + RLDG + ER ++ F+ R +
Sbjct: 408 ILQDFMEL--RR----------YSYERLDGSVRAEERFAAIKNFSAKTERGLDSEVDGSN 455
Query: 452 ----LISTRAGSLGINLHAANRVVIVDGSWNPTYDLQAIYRAWRYGQKKPVFAYRLLAHG 507
+ISTRAG +G+NL AA+ V+ + WNP D QA+ RA R GQ V + L+
Sbjct: 456 AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQISHVLSINLVTEH 515
Query: 508 TMEEKIYKRQVTKEGLAARVV 528
++EE I +R K L+ VV
Sbjct: 516 SVEEVILRRAERKLQLSHNVV 536
>AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 |
chr3:8832085-8835722 REVERSE LENGTH=1132
Length = 1132
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 105/198 (53%), Gaps = 26/198 (13%)
Query: 367 KMVLLIDILTMSSDVGDKVLVFSQSIPTLDLI-ELYLSRIPRRGKQGKLWKKGKDWYRLD 425
K LID + +S V +KVLV+SQ I TL LI E ++ W +G+ +
Sbjct: 928 KTKFLIDFIRISGTVKEKVLVYSQYIDTLKLIMEQLIAECD--------WTEGEQILLMH 979
Query: 426 GRTESSERQKLVEKFNEPLNRRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQA 485
G+ E +RQ +++ FN+P + K L ST+A S GI+L A+RVVI+D WNP+ + QA
Sbjct: 980 GKVEQRDRQHMIDNFNKP-DSGSKVLLASTKACSEGISLVGASRVVILDVVWNPSVESQA 1038
Query: 486 IYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVV------DRQQVHRTISK 539
I RA+R GQK+ VF Y L+ T E Y +Q K ++ V D+ + +SK
Sbjct: 1039 ISRAFRIGQKRAVFIYHLMVKDTSEWNKYCKQSEKHRISELVFSSTNEKDKPINNEVVSK 1098
Query: 540 EEML----------HLFE 547
+ +L H+FE
Sbjct: 1099 DRILDEMVRHEKLKHIFE 1116
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 110/265 (41%), Gaps = 26/265 (9%)
Query: 2 GLGKTFQVIAFLYTAMRSVDLGLRTALIVTPVNVLHNWRREFIKWAPS----ELTPLRIF 57
G GKT + FL + ++ +++ P ++ W E KW + + L++
Sbjct: 619 GTGKTRLTVVFLQSYLKR--FPNSHPMVIAPATLMRTWEDEVRKWNVNIPFYNMNSLQLS 676
Query: 58 MLEDVP-----RDRRAH------LLAKWRAKGGVFLIGYSAFRNLSFGKNVKDRHMARET 106
ED R H L W + + I Y + L+ KN + + R
Sbjct: 677 GYEDAEAVSRLEGNRHHNSIRMVKLVSWWKQKSILGISYPLYEKLAANKNTEGMQVFR-- 734
Query: 107 CRALQDGPDILVCDEAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFV 166
R L + P +LV DE H +N + + + L +V+ ++RI L+G+ QNN E ++
Sbjct: 735 -RMLVELPGLLVLDEGHTPRNQSSLIWKVLTEVRTEKRIFLSGTLFQNNFKELSNVLCLA 793
Query: 167 REGFLGSSHEFRNRFQNPIENGQHTNSTQTDVKIMNQRSHILYEELKGFVQRMDMNVVKK 226
R + + + G+H + + +I++ ++ I + FV + ++++
Sbjct: 794 RPADKDTISSRIHELSKCSQEGEHGRVNEEN-RIVDLKAMIAH-----FVHVHEGTILQE 847
Query: 227 DLPPKTVFVITVKLSPLQRKLYKRF 251
LP V+ + Q+K+ R
Sbjct: 848 SLPGLRDCVVVLNPPFQQKKILDRI 872
>AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552440-18556669
REVERSE LENGTH=851
Length = 851
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 137/540 (25%), Positives = 218/540 (40%), Gaps = 113/540 (20%)
Query: 1 MGLGKTFQVIAFL-YTAMRSVDLGLRTA-LIVTPVNVLHNWRREFIKWAPSELTPLRIFM 58
MGLGKT Q I+FL Y R GL L++ P++V W E ++ P+ L LR
Sbjct: 79 MGLGKTLQAISFLSYLKFRQ---GLPGPFLVLCPLSVTDGWVSEINRFTPN-LEVLRYVG 134
Query: 59 LEDVPRDRRAHLLAKWRAKGGVFLIGYSAFRNLSFGKNVKDRHMARETCRALQDGP-DIL 117
+ D R + Y L F + +A L P
Sbjct: 135 DKYCRLDMRKSM--------------YDHGHFLPFDVLLTTYDIALVDQDFLSQIPWQYA 180
Query: 118 VCDEAHMIKNTKADVTQAL-KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 176
+ DEA +KN + + L +Q RR+ +TG+P+QNNL E + ++ F G+ +
Sbjct: 181 IIDEAQRLKNPNSVLYNVLLEQFLIPRRLLITGTPIQNNLTELWALMHFCMPLVFGTLDQ 240
Query: 177 FRNRFQNPIENGQHTNSTQTDVKIMNQRSHILYEELK----GFVQRMDMNVVKKD----L 228
F + F+ + +N +T Y+ LK F+ R +++ + L
Sbjct: 241 FLSAFKETGDGLDVSNDKET------------YKSLKFILGAFMLRRTKSLLIESGNLVL 288
Query: 229 PPKTVFVITVKLSPLQRKLYKRFLDVHGFTNVRAHHEQLRKRSFFAGYQALARIWNHPGI 288
PP T + V L LQ+K+Y LRK PG+
Sbjct: 289 PPLTELTVMVPLVSLQKKIYTSI---------------LRKE--------------LPGL 319
Query: 289 LQLTKEEKERVRHEDAVENFLVXXXXXXXXXXXXVLAGEKMKETNQFMPRKDGDGFFVKG 348
L+L+ +++N ++ + G + + P ++G+ V+
Sbjct: 320 LELSSGGSNHT----SLQNIVI--QLRKACSHPYLFPGIEPE------PFEEGE-HLVQA 366
Query: 349 WWNDLLHGKIYKELDQSGKMVLLIDILTMSSDVGDKVLVFSQSIPTLDLIELYLSRIPRR 408
L+ ++ K L SG VLL FSQ TLD+++ ++ RR
Sbjct: 367 SGKLLVLDQLLKRLHDSGHRVLL----------------FSQMTSTLDILQDFMEL--RR 408
Query: 409 GKQGKLWKKGKDWYRLDGRTESSERQKLVEKFNEPLNRRVKCTLISTRAGSLGINLHAAN 468
+ RLDG + ER ++ F+ +ISTRAG +G+NL AA+
Sbjct: 409 ----------YSYERLDGSVRAEERFAAIKNFSVD-GSNAFVFMISTRAGGVGLNLVAAD 457
Query: 469 RVVIVDGSWNPTYDLQAIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVV 528
V+ + WNP D QA+ RA R GQ V + L+ ++EE I +R K L+ VV
Sbjct: 458 TVIFYEQDWNPQVDKQALQRAHRIGQISHVLSINLVTEHSVEEVILRRAERKLQLSHNVV 517
>AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDDM1
| chromatin remodeling 1 | chr5:26649050-26652869
FORWARD LENGTH=764
Length = 764
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 99/181 (54%), Gaps = 26/181 (14%)
Query: 384 KVLVFSQSIPTLDLIELYLSRIPRRGKQGKLWKKGKDWYRLDGRTESSERQKLVEKFNEP 443
KVL+FSQ LD+++ Y S +KG + R+DG + ER++ ++ F+
Sbjct: 542 KVLIFSQWTKLLDIMDYYFS------------EKGFEVCRIDGSVKLDERRRQIKDFS-- 587
Query: 444 LNRRVKCT--LISTRAGSLGINLHAANRVVIVDGSWNPTYDLQAIYRAWRYGQKKPVFAY 501
+ + C+ L+STRAG LGINL AA+ ++ D WNP DLQA+ R R GQ KPV Y
Sbjct: 588 -DEKSSCSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVY 646
Query: 502 RLLAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISK-------EEMLHLFEFGDDENP 554
RL ++E ++ KR +K L V+ + Q H+ +K E++L L + +DE
Sbjct: 647 RLSTAQSIETRVLKRAYSKLKLEHVVIGQGQFHQERAKSSTPLEEEDILALLK--EDETA 704
Query: 555 E 555
E
Sbjct: 705 E 705
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 131/298 (43%), Gaps = 30/298 (10%)
Query: 1 MGLGKTFQVIAFLYTAMRSVDLGLRTALIVTPVNVLHNWRREFIKWAPSELTPLRIFMLE 60
MGLGKT Q I FL + ++ L L++ P++ L NW E ++ PS I+ +
Sbjct: 229 MGLGKTIQTIGFL-SHLKGNGLD-GPYLVIAPLSTLSNWFNEIARFTPS--INAIIYHGD 284
Query: 61 DVPRD--RRAHLLAKWRAKGGVFLIGYSAFRNLSFGKNVKDRHMARETCRALQDGP-DIL 117
RD RR H+ K + + Y N + R L+ P +
Sbjct: 285 KNQRDELRRKHMPKTVGPKFPIVITSYEVAMN--------------DAKRILRHYPWKYV 330
Query: 118 VCDEAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEF 177
V DE H +KN K + + LK +K ++ LTG+PLQNNL E + +++F+ S EF
Sbjct: 331 VIDEGHRLKNHKCKLLRELKHLKMDNKLLLTGTPLQNNLSELWSLLNFILPDIFTSHDEF 390
Query: 178 RNRFQNPIENGQHTNSTQTDVKIMNQRSHILYEELKGFVQRMDMNVVKKDLPPKTVFVIT 237
+ F E ++ + + + K Q L+ L+ F+ R V+ LP K ++
Sbjct: 391 ESWFDFS-EKNKNEATKEEEEKRRAQVVSKLHGILRPFILRRMKCDVELSLPRKKEIIMY 449
Query: 238 VKLSPLQRK----LYKRFLDVH-GFTNVRAHHEQLRKRSFFAGYQALARIWNHPGILQ 290
++ Q+K L L+ H G +R + + + L + NHP +LQ
Sbjct: 450 ATMTDHQKKFQEHLVNNTLEAHLGENAIRGQGWKGKLNNLVI---QLRKNCNHPDLLQ 504
>AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2192
Length = 2192
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 125/504 (24%), Positives = 211/504 (41%), Gaps = 91/504 (18%)
Query: 1 MGLGKTFQVIAFLYTAMRSVDLGLRTALIVTPVNVLHNWRREFIKWAPSELTPLRIFMLE 60
MGLGKT QV+A + M LI+ P VL NW+ E W PS I+ +
Sbjct: 1008 MGLGKTVQVMALIAYLM-EFKGNYGPHLIIVPNAVLVNWKSELHTWLPSVSC---IYYVG 1063
Query: 61 DVPRDRRAHLLAKWR-AKGGVFLIGYSAFRNLSFGKNVKDRHMARETCRALQDGPDILVC 119
+D+R+ L ++ + K V + Y + DR + ++
Sbjct: 1064 T--KDQRSKLFSQVKFEKFNVLVTTYEFI--------MYDRSKLSKVDWKY------III 1107
Query: 120 DEAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 179
DEA +K+ ++ + + L + +CQRR+ LTG+PLQN+L E + +++ + + F +
Sbjct: 1108 DEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPDVFDNRKAFHD 1167
Query: 180 RFQNPIENGQHTNSTQTDVKIMNQRS---HILYEELKGFVQRMDMNVVKKDLPPKTVFVI 236
F P + ++ + D ++ H L++ L+ F+ R + V+ LP K V+
Sbjct: 1168 WFAQPFQKEGPAHNIEDDWLETEKKVIVIHRLHQILEPFMLRRRVEDVEGSLPAKVSVVL 1227
Query: 237 TVKLSPLQRKLYKRFLDVHGFTNVRAHHEQLRKRSFFAGYQALARIWNHPGILQLTKEEK 296
++S +Q +Y ++ G V E+LR + + R N+ ++L K
Sbjct: 1228 RCRMSAIQSAVYD-WIKATGTLRVDPDDEKLRAQKNPIYQAKIYRTLNN-RCMELRKACN 1285
Query: 297 ERVRHEDAVENFLVXXXXXXXXXXXXVLAGEKMKETNQFMPRKDGDGFFVKGWWNDLLHG 356
+ + +F + F+ R G K W D
Sbjct: 1286 HPLLNYPYFNDF-----------------------SKDFLVRSCG-----KLWILD---- 1313
Query: 357 KIYKELDQSGKMVLLIDILTMSSDVGDKVLVFSQSIPTLDLIELYLSRIPRRGKQGKLWK 416
+I +L ++G VLL +T LD++E YL W+
Sbjct: 1314 RILIKLQRTGHRVLLFSTMTK----------------LLDILEEYLQ-----------WR 1346
Query: 417 KGKDWYRLDGRTESSERQKLVEKFNEPLNRRVKC--TLISTRAGSLGINLHAANRVVIVD 474
+ + R+DG T +R+ + FN+P C L+S RA G+NL A+ VVI D
Sbjct: 1347 R-LVYRRIDGTTSLEDRESAIVDFNDP---DTDCFIFLLSIRAAGRGLNLQTADTVVIYD 1402
Query: 475 GSWNPTYDLQAIYRAWRYGQKKPV 498
NP + QA+ RA R GQ + V
Sbjct: 1403 PDPNPKNEEQAVARAHRIGQTREV 1426
>AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2193
Length = 2193
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 125/505 (24%), Positives = 210/505 (41%), Gaps = 92/505 (18%)
Query: 1 MGLGKTFQVIAFLYTAMRSVDLGLRTALIVTPVNVLHNWRREFIKWAPSELTPLRIFMLE 60
MGLGKT QV+A + M LI+ P VL NW+ E W PS I+ +
Sbjct: 1008 MGLGKTVQVMALIAYLM-EFKGNYGPHLIIVPNAVLVNWKSELHTWLPSVSC---IYYVG 1063
Query: 61 DVPRDRRAHLLAK--WRAKGGVFLIGYSAFRNLSFGKNVKDRHMARETCRALQDGPDILV 118
+D+R+ L ++ K V + Y + DR + ++
Sbjct: 1064 T--KDQRSKLFSQEVCAMKFNVLVTTYEFI--------MYDRSKLSKVDWKY------II 1107
Query: 119 CDEAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFR 178
DEA +K+ ++ + + L + +CQRR+ LTG+PLQN+L E + +++ + + F
Sbjct: 1108 IDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPDVFDNRKAFH 1167
Query: 179 NRFQNPIENGQHTNSTQTDVKIMNQRS---HILYEELKGFVQRMDMNVVKKDLPPKTVFV 235
+ F P + ++ + D ++ H L++ L+ F+ R + V+ LP K V
Sbjct: 1168 DWFAQPFQKEGPAHNIEDDWLETEKKVIVIHRLHQILEPFMLRRRVEDVEGSLPAKVSVV 1227
Query: 236 ITVKLSPLQRKLYKRFLDVHGFTNVRAHHEQLRKRSFFAGYQALARIWNHPGILQLTKEE 295
+ ++S +Q +Y ++ G V E+LR + + R N+ ++L K
Sbjct: 1228 LRCRMSAIQSAVYD-WIKATGTLRVDPDDEKLRAQKNPIYQAKIYRTLNN-RCMELRKAC 1285
Query: 296 KERVRHEDAVENFLVXXXXXXXXXXXXVLAGEKMKETNQFMPRKDGDGFFVKGWWNDLLH 355
+ + +F + F+ R G K W D
Sbjct: 1286 NHPLLNYPYFNDF-----------------------SKDFLVRSCG-----KLWILD--- 1314
Query: 356 GKIYKELDQSGKMVLLIDILTMSSDVGDKVLVFSQSIPTLDLIELYLSRIPRRGKQGKLW 415
+I +L ++G VLL +T LD++E YL W
Sbjct: 1315 -RILIKLQRTGHRVLLFSTMTK----------------LLDILEEYLQ-----------W 1346
Query: 416 KKGKDWYRLDGRTESSERQKLVEKFNEPLNRRVKC--TLISTRAGSLGINLHAANRVVIV 473
++ + R+DG T +R+ + FN+P C L+S RA G+NL A+ VVI
Sbjct: 1347 RR-LVYRRIDGTTSLEDRESAIVDFNDP---DTDCFIFLLSIRAAGRGLNLQTADTVVIY 1402
Query: 474 DGSWNPTYDLQAIYRAWRYGQKKPV 498
D NP + QA+ RA R GQ + V
Sbjct: 1403 DPDPNPKNEEQAVARAHRIGQTREV 1427
>AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 |
chr3:14755906-14760085 REVERSE LENGTH=1256
Length = 1256
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 99/182 (54%), Gaps = 8/182 (4%)
Query: 352 DLLHGKIYKELDQSGKMVLLIDILTMSSDVGDKVLVFSQSIPTLDLIELYLSRIPRRGKQ 411
+LL + K + G V+ + L +K+L+F +I + L + R
Sbjct: 1042 ELLEIEKLKHDAKKGSKVMFVLNLVFRVVKREKILIFCHNIAPIRLFLELFENVFR---- 1097
Query: 412 GKLWKKGKDWYRLDGRTESSERQKLVEKFNEPLNRRVKCTLISTRAGSLGINLHAANRVV 471
WK+G++ L G E ER ++++KF EP + + L S A + GI+L AA+RV+
Sbjct: 1098 ---WKRGRELLTLTGDLELFERGRVIDKFEEP-GGQSRVLLASITACAEGISLTAASRVI 1153
Query: 472 IVDGSWNPTYDLQAIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVVDRQ 531
++D WNP+ QAI RA+R GQ+K V+ Y+LL+ GT+EE Y+R KE +++ + +
Sbjct: 1154 MLDSEWNPSKTKQAIARAFRPGQQKVVYVYQLLSRGTLEEDKYRRTTWKEWVSSMIFSEE 1213
Query: 532 QV 533
V
Sbjct: 1214 FV 1215
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 28/192 (14%)
Query: 2 GLGKTFQVIAFLYTAMRSVDLGLRTALIVTPVNVLHNWRREFIKW---APSEL------- 51
G GKTF +IAFL + ++ + G R L++ P L+ W +EFIKW P L
Sbjct: 715 GAGKTFLIIAFLASYLK-IFPGKR-PLVLAPKTTLYTWYKEFIKWEIPVPVHLLHGRRTY 772
Query: 52 --TPLRIFMLEDVPRDRR--AHLL------AKWRAKGGVFLIGYSAFRNL--SFGKNVKD 99
+ + E +P+ + H+L KW A+ V ++GY++F L K
Sbjct: 773 CMSKEKTIQFEGIPKPSQDVMHVLDCLDKIQKWHAQPSVLVMGYTSFLTLMREDSKFAHR 832
Query: 100 RHMARETCRALQDGPDILVCDEAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEY 159
++MA+ L++ P +LV DE H ++TK+ + +AL +V RI L+G+ QNN EY
Sbjct: 833 KYMAK----VLRESPGLLVLDEGHNPRSTKSRLRKALMKVDTDLRILLSGTLFQNNFCEY 888
Query: 160 YCMVDFVREGFL 171
+ + R F+
Sbjct: 889 FNTLCLARPKFV 900
>AT5G20420.1 | Symbols: CHR42 | chromatin remodeling 42 |
chr5:6899015-6903266 REVERSE LENGTH=1261
Length = 1261
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 87/151 (57%), Gaps = 8/151 (5%)
Query: 383 DKVLVFSQSIPTLDLIELYLSRIPRRGKQGKLWKKGKDWYRLDGRTESSERQKLVEKFNE 442
+K+L+F +I + + I R W++G++ L G E ER ++++KF E
Sbjct: 1079 EKILIFCHNIAPIRMFTELFENIFR-------WQRGREILTLTGDLELFERGRVIDKFEE 1131
Query: 443 PLNRRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQAIYRAWRYGQKKPVFAYR 502
P N + L S A + GI+L AA+RV+++D WNP+ QAI RA+R GQ+K V+ Y+
Sbjct: 1132 PGNPS-RVLLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQQKVVYVYQ 1190
Query: 503 LLAHGTMEEKIYKRQVTKEGLAARVVDRQQV 533
LL+ GT+EE Y+R KE ++ + + V
Sbjct: 1191 LLSRGTLEEDKYRRTTWKEWVSCMIFSEEFV 1221
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 93/193 (48%), Gaps = 29/193 (15%)
Query: 2 GLGKTFQVIAFLYTAMRSVDLGLRTALIVTPVNVLHNWRREFIKW---APSELTPLR--- 55
G GKTF +IAFL + ++ G R L++ P L+ W +EFIKW P L R
Sbjct: 720 GAGKTFLIIAFLTSYLKLFP-GKR-PLVLAPKTTLYTWYKEFIKWEIPVPVHLIHGRRTY 777
Query: 56 -------IFMLEDVPRDRR--AHLL------AKWRAKGGVFLIGYSAFRNL--SFGKNVK 98
VP+ R H+L KW A V ++GY++F L K
Sbjct: 778 CTFKQNKTVQFNGVPKPSRDVMHVLDCLEKIQKWHAHPSVLVMGYTSFTTLMREDSKFAH 837
Query: 99 DRHMARETCRALQDGPDILVCDEAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLME 158
++MA+ L++ P +LV DE H ++TK+ + +AL +V RI L+G+ QNN E
Sbjct: 838 RKYMAK----VLRESPGLLVLDEGHNPRSTKSRLRKALMKVGTDLRILLSGTLFQNNFCE 893
Query: 159 YYCMVDFVREGFL 171
Y+ + R F+
Sbjct: 894 YFNTLCLARPKFI 906
>AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domain |
chr5:17489327-17494830 FORWARD LENGTH=1277
Length = 1277
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 104/191 (54%), Gaps = 17/191 (8%)
Query: 358 IYKELDQSGKMVLLIDIL--TMSSDVGDKVLVFSQSIPTLDLIELYLSRIPRRGKQGKLW 415
+ K +S K+ L+ L S G+K +VFSQ LDL+E+ L R
Sbjct: 1101 VVKNWKESSKVSELLKCLEKIKKSGSGEKSIVFSQWTSFLDLLEIPLRR----------- 1149
Query: 416 KKGKDWYRLDGRTESSERQKLVEKFNEPLNRRVKCTLISTRAGSLGINLHAANRVVIVDG 475
+G ++ R DG+ R+K++++FNE + + L+S +AG +G+NL AA+ V ++D
Sbjct: 1150 -RGFEFLRFDGKLAQKGREKVLKEFNETKQKTI--LLMSLKAGGVGLNLTAASSVFLMDP 1206
Query: 476 SWNPTYDLQAIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVVDRQQVHR 535
WNP + QAI R R GQK+ VF R + T+EE++ + Q K+ + A + ++V R
Sbjct: 1207 WWNPAVEEQAIMRIHRIGQKRTVFVRRFIVKDTVEERMQQVQARKQRMIAGALTDEEV-R 1265
Query: 536 TISKEEMLHLF 546
+ EE+ LF
Sbjct: 1266 SARLEELKMLF 1276
>AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:576046-580299
FORWARD LENGTH=678
Length = 678
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 144/553 (26%), Positives = 221/553 (39%), Gaps = 92/553 (16%)
Query: 1 MGLGKTFQVIAFLYTAMRSVDLG-----LRTALIVTPVNVLHNWRREFIKWAPSELTPLR 55
MG+GKT Q I+ L A R VD + L++ P L W E + T R
Sbjct: 162 MGMGKTIQAIS-LVLARREVDRAKSREAVGHTLVLVPPVALSQWLDEISRLTSPGST--R 218
Query: 56 IFMLEDVPRDRRAHLLAKWRAKGGVFLIGYSAFRNLSFGKNVKDRHMARETCRALQDGP- 114
+ RD+ L + F++ S + K+ ET L
Sbjct: 219 VLQYHGPKRDKNVQKLMNYD-----FVLTTSPIVENEYRKD----EGVDETMSPLHSIKW 269
Query: 115 DILVCDEAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 174
+ ++ DEAH IKN + +A+ ++ R AL+G+PLQN++ E Y +V + F S+
Sbjct: 270 NRIIVDEAHDIKNRSSRTAKAVFALEATYRWALSGTPLQNDVDELYSLVSYSFLNFFYST 329
Query: 175 H-EFRNRFQNPIENGQHTNST---QTDVKIMNQRSHILYEELKGFVQRMDMNVVKKDLPP 230
+ F R HT+ T VK + + G + + + V +++P
Sbjct: 330 YASFAFR---------HTHITFARNVTVKFL----------IGGNILPLSIPVRIENVPA 370
Query: 231 KTVFVITVKLSPLQRKLYKRFLDVHGFTNVRAH-HEQLRK--RSFFAGY-QALARIWNHP 286
+ I L +R + V A +E L K ++ F GY QA + N+
Sbjct: 371 VLIMQINTSLGGKRRD---------ALSVVEADFYESLYKVSKTTFDGYIQAGTLMNNYA 421
Query: 287 GILQLTKEEKERVRHEDAVENFLVXXXXXXXXXXXXVLAGEKMKETN-QFMPRKDGDGFF 345
I L ++ V H +LV + A + KE P KD +F
Sbjct: 422 HIFGLLIRLRQAVDHP-----YLVSYSSPSGANANLLDANKNEKECGFGHDPSKD---YF 473
Query: 346 V------------KGWWNDLLHGKI-YKELDQSGKMVLLIDIL--TMSSDVGDKVLVFSQ 390
V KG+ + +I + S K+ L + + + D K +VFSQ
Sbjct: 474 VTSSEHQASKTKLKGFRASSILNRINLDDFKTSTKIEALREEIRFMVERDWSAKAIVFSQ 533
Query: 391 SIPTLDLIELYLSRIPRRGKQGKLWKKGKDWYRLDGRTESSERQKLVEKFNEPLNRRVKC 450
LDLI L K G +L G + + ++ F E + RV
Sbjct: 534 FTSFLDLISYALG------------KSGVSCVQLVGSMSKAAKDAALKNFKEEPDCRV-- 579
Query: 451 TLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQAIYRAWRYGQKKPVFAYRLLAHGTME 510
L+S +AG + +NL AA+ V ++D WNP + QA R R GQ KPV R + T+E
Sbjct: 580 LLMSLQAGGVALNLTAASHVFMMDPWWNPAVERQAQDRIHRIGQCKPVRVVRFIMEKTVE 639
Query: 511 EKIYKRQVTKEGL 523
EKI Q KE L
Sbjct: 640 EKILTLQKKKEDL 652
>AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1507
Length = 1507
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 90/162 (55%), Gaps = 16/162 (9%)
Query: 360 KELDQSGKMVLLIDILTMSSDVGD-KVLVFSQSIPTLDLIELYLSRIPRRGKQGKLWKKG 418
K L SGK+ L DIL G+ +VL+F+Q L+++E Y++ ++K
Sbjct: 1200 KLLTDSGKLQTL-DILLKRLRAGNHRVLLFAQMTKMLNILEDYMN-----------YRKY 1247
Query: 419 KDWYRLDGRTESSERQKLVEKFNEPLNRRVKCTLISTRAGSLGINLHAANRVVIVDGSWN 478
K + RLDG + +R+ +V F + L+STRAG LGINL AA+ V+ + WN
Sbjct: 1248 K-YLRLDGSSTIMDRRDMVRDFQH--RSDIFVFLLSTRAGGLGINLTAADTVIFYESDWN 1304
Query: 479 PTYDLQAIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTK 520
PT DLQA+ RA R GQ K V YRL+ T+EEKI R K
Sbjct: 1305 PTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILHRASQK 1346
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 113/254 (44%), Gaps = 27/254 (10%)
Query: 1 MGLGKTFQVIAFLYTAMRSVDLGLRTALIVTPVNVLHNWRREFIKWAPSELT-PLRIFML 59
MGLGKT Q +AFL ++ L+V P +VL+NW E ++ P T P +
Sbjct: 613 MGLGKTIQAMAFLAHLAEEKNI-WGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQ 671
Query: 60 EDVPRDRRAHLLAKWRAKGGVFLIGYSAFRNL----SFGKNVKDRHMARETCRALQDGPD 115
E + + +R G F I ++++ L + + VK ++M
Sbjct: 672 ERTILRKNINPKRMYRRDAG-FHILITSYQLLVTDEKYFRRVKWQYM------------- 717
Query: 116 ILVCDEAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSH 175
V DEA IK++ + + L C+ R+ LTG+P+QNN+ E + ++ F+ +
Sbjct: 718 --VLDEAQAIKSSSSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPMLFDNHD 775
Query: 176 EFRNRFQNPIENGQHTNSTQTDVKIMNQRSHILYEELKGFVQRMDMNVVKKDLPPKTVFV 235
+F F IEN T + ++ R H + LK F+ R V +L KT
Sbjct: 776 QFNEWFSKGIENHAEHGGTLNEHQL--NRLHAI---LKPFMLRRVKKDVVSELTTKTEVT 830
Query: 236 ITVKLSPLQRKLYK 249
+ KLS Q+ Y+
Sbjct: 831 VHCKLSSRQQAFYQ 844
>AT3G57300.2 | Symbols: INO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1540
Length = 1540
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 90/162 (55%), Gaps = 16/162 (9%)
Query: 360 KELDQSGKMVLLIDILTMSSDVGD-KVLVFSQSIPTLDLIELYLSRIPRRGKQGKLWKKG 418
K L SGK+ L DIL G+ +VL+F+Q L+++E Y++ ++K
Sbjct: 1233 KLLTDSGKLQTL-DILLKRLRAGNHRVLLFAQMTKMLNILEDYMN-----------YRKY 1280
Query: 419 KDWYRLDGRTESSERQKLVEKFNEPLNRRVKCTLISTRAGSLGINLHAANRVVIVDGSWN 478
K + RLDG + +R+ +V F + L+STRAG LGINL AA+ V+ + WN
Sbjct: 1281 K-YLRLDGSSTIMDRRDMVRDFQH--RSDIFVFLLSTRAGGLGINLTAADTVIFYESDWN 1337
Query: 479 PTYDLQAIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTK 520
PT DLQA+ RA R GQ K V YRL+ T+EEKI R K
Sbjct: 1338 PTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILHRASQK 1379
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 131/326 (40%), Gaps = 52/326 (15%)
Query: 1 MGLGKTFQVIAFLYTAMRSVDLGLRTALIVTPVNVLHNWRREFIKWAPSELT-PL----- 54
MGLGKT Q +AFL ++ L+V P +VL+NW E ++ P T P
Sbjct: 613 MGLGKTIQAMAFLAHLAEEKNI-WGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQ 671
Query: 55 -RIFMLEDVPRDRRAHLLAKWRAKGGVFLIGYS--AFRNLSFGKNVKDRHMAR-ETCRAL 110
R + +++ +R + W +I + A R + K + + R +T +
Sbjct: 672 ERTILRKNI-NPKRVMFFSTW-------IISFDPWAVRQICICKRACN--VVRFQTLSDM 721
Query: 111 QDGPDIL----------------------VCDEAHMIKNTKADVTQALKQVKCQRRIALT 148
G IL V DEA IK++ + + L C+ R+ LT
Sbjct: 722 DAGFHILITSYQLLVTDEKYFRRVKWQYMVLDEAQAIKSSSSIRWKTLLSFNCRNRLLLT 781
Query: 149 GSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTQTDVKIMNQRSHIL 208
G+P+QNN+ E + ++ F+ + +F F IEN T + ++ R H +
Sbjct: 782 GTPIQNNMAELWALLHFIMPMLFDNHDQFNEWFSKGIENHAEHGGTLNEHQL--NRLHAI 839
Query: 209 YEELKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRKLYKRFLD----VHGFTNVRAHH 264
LK F+ R V +L KT + KLS Q+ Y+ + F + R
Sbjct: 840 ---LKPFMLRRVKKDVVSELTTKTEVTVHCKLSSRQQAFYQAIKNKISLAELFDSNRGQF 896
Query: 265 EQLRKRSFFAGYQALARIWNHPGILQ 290
+ + L ++ NHP + +
Sbjct: 897 TDKKVLNLMNIVIQLRKVCNHPELFE 922
>AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:7097638-7101182 FORWARD LENGTH=888
Length = 888
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 90/164 (54%), Gaps = 9/164 (5%)
Query: 361 ELDQSGKMVLLIDILTMSSDVGDKVLVFSQSIPTLDLIELYLSRIPRRGKQGKLWKKGKD 420
+L++ K ++++ + G+K+LVFSQ + L +E R K WK GK+
Sbjct: 689 DLNEGVKAKFFLNLINLCDSAGEKLLVFSQYLIPLKFLE-------RLAALAKGWKLGKE 741
Query: 421 WYRLDGRTESSERQKLVEKFNEPLNRRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPT 480
+ L G T S +R+ +E FN + ++ S +A GI+L A+R++I+D NP+
Sbjct: 742 VFVLTGNTSSEQREWSMETFNSSPDAKI--FFGSIKACGEGISLVGASRILILDVPLNPS 799
Query: 481 YDLQAIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLA 524
QAI RA+R GQKK V AYRL+A + EE+ + KE ++
Sbjct: 800 VTRQAIGRAFRPGQKKMVHAYRLIAGSSPEEEDHNTCFKKEVIS 843
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 88/171 (51%), Gaps = 8/171 (4%)
Query: 2 GLGKTFQVIAFLYTAMRSVDLGLRTALIVTPVNVLHNWRREFIKWAPSELTPLRIFMLED 61
G GKTF +I+F+ + + L+V P +L W++EF++W ++ L + +
Sbjct: 380 GSGKTFMIISFMQSFLAKYPQA--KPLVVLPKGILPTWKKEFVRWQVEDIPLLDFYSAKA 437
Query: 62 VPRDRRAHLLAKWRAKGGVFLIGYSAFRNLSFGKNVKDRHMARETCRA-LQDGPDILVCD 120
R ++ +L +W K + +GY F + V D +C+ L P IL+ D
Sbjct: 438 ENRAQQLSILKQWMEKKSILFLGYQQFSTI-----VCDDTTDSLSCQEILLKVPSILILD 492
Query: 121 EAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 171
E H +N ++ Q+L QV+ R++ L+G+ QN++ E + +++ VR FL
Sbjct: 493 EGHTPRNEDTNLLQSLAQVQTPRKVVLSGTLYQNHVKEVFNILNLVRPKFL 543
>AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein |
chr5:7565374-7570871 REVERSE LENGTH=1029
Length = 1029
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 97/183 (53%), Gaps = 15/183 (8%)
Query: 364 QSGKMVLLIDILTMSSDVGDKVLVFSQSIPTLDLIELYLSRIPRRGKQGKLWKKGKDWYR 423
+S K+ L++ L G K ++FSQ LDL+++ LSR + R
Sbjct: 861 ESSKITALLEELEGLRSSGSKSILFSQWTAFLDLLQIPLSR------------NNFSFVR 908
Query: 424 LDGRTESSERQKLVEKFNEPLNRRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYDL 483
LDG +R+K++++F+E + + L+S +AG +GINL AA+ ++D WNP +
Sbjct: 909 LDGTLSQQQREKVLKEFSE--DGSILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEE 966
Query: 484 QAIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEML 543
QA+ R R GQ K V R + GT+EE++ Q K+ + + + Q+V R+ EE+
Sbjct: 967 QAVMRIHRIGQTKEVKIRRFIVKGTVEERMEAVQARKQRMISGALTDQEV-RSARIEELK 1025
Query: 544 HLF 546
LF
Sbjct: 1026 MLF 1028
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 95/222 (42%), Gaps = 20/222 (9%)
Query: 28 LIVTPVNVLHNWRREFIKWAPSELTPLRIFMLEDVPRDRRAHLLAKWRAKGGVFLIGYSA 87
LIV P+ +L W+ E A + + + P+D AK ++ V + Y
Sbjct: 493 LIVCPMTLLGQWKTEIEMHAKPGSLSVYVHYGQSRPKD------AKLLSQSDVVITTYGV 546
Query: 88 FRNLSFGKNVKDRHMARETCRALQDGPDILVCDEAHMIKNTKADVTQALKQVKCQRRIAL 147
+ +N D H R + +V DEAH IKN+K+ ++ A + RR L
Sbjct: 547 LTSEFSQENSAD-HEGIYAVRWFR-----IVLDEAHTIKNSKSQISLAAAALVADRRWCL 600
Query: 148 TGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTQTDVKIMNQ-RSH 206
TG+P+QNNL + Y ++ F+R G+ + Q P E G + +K++
Sbjct: 601 TGTPIQNNLEDLYSLLRFLRIEPWGTWAWWNKLVQKPFEEGD-----ERGLKLVQSILKP 655
Query: 207 ILYEELKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRKLY 248
I+ K R ++ LPP VI +LS +R Y
Sbjct: 656 IMLRRTKSSTDREGRPILV--LPPADARVIYCELSESERDFY 695
>AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr3:6971352-6976340 FORWARD LENGTH=1047
Length = 1047
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 82/142 (57%), Gaps = 14/142 (9%)
Query: 384 KVLVFSQSIPTLDLIELYLSRIPRRGKQGKLWKKGKDWYRLDGRTESSERQKLVEKFNEP 443
K ++FSQ LDL+EL ++ + G ++ RLDG + R + V++F++
Sbjct: 894 KTIIFSQWTGMLDLVEL------------RILESGIEFRRLDGTMSLAARDRAVKEFSKK 941
Query: 444 LNRRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQAIYRAWRYGQKKPVFAYRL 503
+ VK L+S +AG+LG+N+ AA V+++D WNPT + QAI RA R GQ +PV R+
Sbjct: 942 PD--VKVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRI 999
Query: 504 LAHGTMEEKIYKRQVTKEGLAA 525
T+E++I K Q K + A
Sbjct: 1000 TIKDTVEDRILKLQEEKRTMVA 1021
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 103/264 (39%), Gaps = 48/264 (18%)
Query: 28 LIVTPVNVLHNWRREFIKWAPSELTPLRIFMLEDVPRDRRAHLLAKWRAKGGVFLI---- 83
LIV P +V+ W RE + SE + L + + R + + LA++ + I
Sbjct: 417 LIVCPASVVRQWARELDEKV-SEESKLSVLVYHGSNRTKDPNELAEYDVVVTTYAIVTNE 475
Query: 84 ------------------------GYS--AFRNLSFGKNVKDRHMARETCRALQDGPDI- 116
G+S R + G + K + R++ PD
Sbjct: 476 APNKFLVDEDENDEKNTDRYGLASGFSNNKKRKVVVGASKKSKRRGRKSTNDTSSEPDCG 535
Query: 117 ---------LVCDEAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 167
+V DEA IKN + + ++ ++ +RR L+G+P+QN + + Y F+R
Sbjct: 536 PLGKVGWFRIVLDEAQTIKNYRTQMARSCCTLRAKRRWCLSGTPIQNTIDDLYSYFRFLR 595
Query: 168 EGFLGSSHEFRNRFQNPIENGQHTNSTQTDVKIMNQRSHILYEELKGFVQRMDMNVVKKD 227
F + + PI NS Q K+ I+ KG + +D + +
Sbjct: 596 YDPYAVYKSFYSTIKVPISR----NSCQGYKKLQAVLRAIMLRRTKGTL--LDGKPI-IN 648
Query: 228 LPPKTVFVITVKLSPLQRKLYKRF 251
LPPK V + V S +R YK+
Sbjct: 649 LPPKVVNLSQVDFSVAERSFYKKL 672
>AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr1:18672828-18677365 FORWARD LENGTH=981
Length = 981
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 78/143 (54%), Gaps = 16/143 (11%)
Query: 384 KVLVFSQSIPTLDLIELYLSRIPRRGKQGKLWKKGKDWYRLDGRTESSERQKLVEKF-NE 442
K ++FSQ LDL+EL L + ++ RLDG R + V++F N+
Sbjct: 828 KTIIFSQWTGMLDLVEL------------SLIENSIEFRRLDGTMSLIARDRAVKEFSND 875
Query: 443 PLNRRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQAIYRAWRYGQKKPVFAYR 502
P VK ++S +AG+LG+N+ AA V+++D WNPT + QAI RA R GQ +PV R
Sbjct: 876 P---DVKVMIMSLKAGNLGLNMIAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTR 932
Query: 503 LLAHGTMEEKIYKRQVTKEGLAA 525
+ T+E++I Q K + A
Sbjct: 933 ITIKNTVEDRILALQEEKRKMVA 955
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 82/193 (42%), Gaps = 22/193 (11%)
Query: 117 LVCDEAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 176
+V DEA IKN + V +A ++ +RR L+G+P+QN + + Y F++
Sbjct: 474 VVLDEAQTIKNHRTQVARACCGLRAKRRWCLSGTPIQNTIDDLYSYFRFLKYDPYAVYKS 533
Query: 177 FRNRFQNPIENGQHTNSTQTDVKIMNQRSHILYEELKGFVQRMDMNVVKKDLPPKTVFVI 236
F ++ + PI NS Q K+ I+ KG + +D + +LPPKT+ +
Sbjct: 534 FCHQIKGPISR----NSLQGYKKLQAVLRAIMLRRTKGTL--LDGQPI-INLPPKTINLS 586
Query: 237 TVKLSPLQRKLYKRFLDVHGFTNVRAHHEQLRKRSFFAGYQALARI-WNHPGILQLTKEE 295
V S +R Y + + RS F Y A + N+ IL +
Sbjct: 587 QVDFSVEERSFYVKL--------------ESDSRSQFKAYAAAGTLNQNYANILLMLLRL 632
Query: 296 KERVRHEDAVENF 308
++ H V+ +
Sbjct: 633 RQACDHPQLVKRY 645
>AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22539756 REVERSE
LENGTH=1122
Length = 1122
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 96/201 (47%), Gaps = 28/201 (13%)
Query: 357 KIYKELDQSGKMVLLIDILTMSSDV-----GDKVLVFSQSIPTLDLIELYLSRIPRRGKQ 411
+I + + SG + + MS DV G+K +VFSQ L+L+E
Sbjct: 935 QISENREYSGLSITPVKNEGMSVDVPIKVAGEKAIVFSQWTKMLNLLE------------ 982
Query: 412 GKLWKKGKDWYRLDGRTESSERQKLVEKFNE-PLNRRVKCTLISTRAGSLGINLHAANRV 470
L + RLDG + R K V+ FN P V ++S +A SLG+N+ AA V
Sbjct: 983 ASLVSSHIQYRRLDGTMSVAARDKAVQDFNTLP---EVTVMIMSLKAASLGLNMVAACHV 1039
Query: 471 VIVDGSWNPTYDLQAIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVVDR 530
+++D WNPT + QAI RA R GQ +PV R T+E++I Q K + A
Sbjct: 1040 LMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDTVEDRILALQQKKRMMVASAFGE 1099
Query: 531 -----QQVHRTISKEEMLHLF 546
+Q H T+ E++ +LF
Sbjct: 1100 DEKGSRQSHLTV--EDLSYLF 1118
>AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22540610 REVERSE
LENGTH=1280
Length = 1280
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 96/201 (47%), Gaps = 28/201 (13%)
Query: 357 KIYKELDQSGKMVLLIDILTMSSDV-----GDKVLVFSQSIPTLDLIELYLSRIPRRGKQ 411
+I + + SG + + MS DV G+K +VFSQ L+L+E
Sbjct: 1093 QISENREYSGLSITPVKNEGMSVDVPIKVAGEKAIVFSQWTKMLNLLE------------ 1140
Query: 412 GKLWKKGKDWYRLDGRTESSERQKLVEKFNE-PLNRRVKCTLISTRAGSLGINLHAANRV 470
L + RLDG + R K V+ FN P V ++S +A SLG+N+ AA V
Sbjct: 1141 ASLVSSHIQYRRLDGTMSVAARDKAVQDFNTLP---EVTVMIMSLKAASLGLNMVAACHV 1197
Query: 471 VIVDGSWNPTYDLQAIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVVDR 530
+++D WNPT + QAI RA R GQ +PV R T+E++I Q K + A
Sbjct: 1198 LMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDTVEDRILALQQKKRMMVASAFGE 1257
Query: 531 -----QQVHRTISKEEMLHLF 546
+Q H T+ E++ +LF
Sbjct: 1258 DEKGSRQSHLTV--EDLSYLF 1276
>AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr1:3703934-3709302 REVERSE LENGTH=1226
Length = 1226
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 78/165 (47%), Gaps = 17/165 (10%)
Query: 381 VGDKVLVFSQSIPTLDLIELYLSRIPRRGKQGKLWKKGKDWYRLDGRTESSERQKLVEKF 440
G+K +VF+Q LDL+E L G + R DG+ R V+ F
Sbjct: 1070 AGEKAIVFTQWTKMLDLLE------------AGLKSSGIQYRRFDGKMTVPARDAAVQDF 1117
Query: 441 NEPLNRRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQAIYRAWRYGQKKPVFA 500
N + V ++S +A SLG+N+ AA V+++D WNPT + QAI RA R GQ +PV
Sbjct: 1118 NTLPD--VSVMIMSLKAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKV 1175
Query: 501 YRLLAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHL 545
R T+E++I Q K + A H S+E L +
Sbjct: 1176 VRFTVKDTVEDRILALQQKKRKMVASAFGE---HENGSRESHLSV 1217
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 97/234 (41%), Gaps = 33/234 (14%)
Query: 27 ALIVTPVNVLHNWRREFIKWAPSELTPLRIFMLEDVPRDRRAHLLAKWRAKGGVFLIGYS 86
LIV P +++ W E K E L + + R + H LAK+ V + YS
Sbjct: 635 TLIVCPTSLMRQWADELRKKVTLEAH-LSVLVYHGCSRTKDPHELAKY----DVVITTYS 689
Query: 87 AFRNLSFGKNVKDRHMARETCRALQDGPDI------LVCDEAHMIKNTKADVTQALKQVK 140
K +HM E L GP +V DEA IKN K + A +
Sbjct: 690 LVS--------KRKHMDCEPVEFLS-GPLAQVSWFRVVLDEAQSIKNYKTQASIACSGLH 740
Query: 141 CQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIEN--GQHTNSTQTDV 198
+RR L+G+P+QN++ + Y F++ S F +NPI + G+ + Q +
Sbjct: 741 AKRRWCLSGTPIQNSIADLYSYFRFLKYDPYSSYQTFCETIKNPISSYPGEGYKTLQAIL 800
Query: 199 -KIMNQRSHILYEELKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRKLYKRF 251
K+M +R+ + K + LPPK++ + V + +R Y +
Sbjct: 801 KKVMLRRTKDTLLDGKPVIS----------LPPKSIELRRVDFTKEERDFYSKL 844
>AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr1:3703934-3709302 REVERSE LENGTH=1269
Length = 1269
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 78/165 (47%), Gaps = 17/165 (10%)
Query: 381 VGDKVLVFSQSIPTLDLIELYLSRIPRRGKQGKLWKKGKDWYRLDGRTESSERQKLVEKF 440
G+K +VF+Q LDL+E L G + R DG+ R V+ F
Sbjct: 1113 AGEKAIVFTQWTKMLDLLE------------AGLKSSGIQYRRFDGKMTVPARDAAVQDF 1160
Query: 441 NEPLNRRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQAIYRAWRYGQKKPVFA 500
N + V ++S +A SLG+N+ AA V+++D WNPT + QAI RA R GQ +PV
Sbjct: 1161 NTLPD--VSVMIMSLKAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKV 1218
Query: 501 YRLLAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHL 545
R T+E++I Q K + A H S+E L +
Sbjct: 1219 VRFTVKDTVEDRILALQQKKRKMVASAFGE---HENGSRESHLSV 1260
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 106/269 (39%), Gaps = 59/269 (21%)
Query: 27 ALIVTPVNVLHNWRREFIKWAPSELTPLRIFMLEDVPRDRRAHLLAKW------------ 74
LIV P +++ W E K E L + + R + H LAK+
Sbjct: 634 TLIVCPTSLMRQWADELRKKVTLEAH-LSVLVYHGCSRTKDPHELAKYDVVITTYSLVSV 692
Query: 75 --------RA---KGGVFLIGYSAFRNLSFGKNVKD------------RHMARETCRALQ 111
RA KGG+ G ++ FG N KD +HM E L
Sbjct: 693 EVPKQPRDRADEEKGGIHDGG---VESVGFGSNKKDLPNSQKKGTKKRKHMDCEPVEFLS 749
Query: 112 DGPDI------LVCDEAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDF 165
GP +V DEA IKN K + A + +RR L+G+P+QN++ + Y F
Sbjct: 750 -GPLAQVSWFRVVLDEAQSIKNYKTQASIACSGLHAKRRWCLSGTPIQNSIADLYSYFRF 808
Query: 166 VREGFLGSSHEFRNRFQNPIEN--GQHTNSTQTDV-KIMNQRSHILYEELKGFVQRMDMN 222
++ S F +NPI + G+ + Q + K+M +R+ + K +
Sbjct: 809 LKYDPYSSYQTFCETIKNPISSYPGEGYKTLQAILKKVMLRRTKDTLLDGKPVIS----- 863
Query: 223 VVKKDLPPKTVFVITVKLSPLQRKLYKRF 251
LPPK++ + V + +R Y +
Sbjct: 864 -----LPPKSIELRRVDFTKEERDFYSKL 887
>AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domain |
chr1:1471624-1476067 REVERSE LENGTH=833
Length = 833
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 78/168 (46%), Gaps = 15/168 (8%)
Query: 380 DVGDKVLVFSQSIPTLDLIELYLSRIPRRGKQGKLWKKGKDWYRLDGRTESSERQKLVEK 439
D K +VFSQ LDLI L K G +L G + R + K
Sbjct: 678 DGSAKAIVFSQFTSFLDLINYTLG------------KCGVSCVQLVGSMTMAARDTAINK 725
Query: 440 FNEPLNRRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQAIYRAWRYGQKKPVF 499
F E + RV L+S +AG + +NL A+ V ++D WNP + QA R R GQ KP+
Sbjct: 726 FKEDPDCRV--FLMSLKAGGVALNLTVASHVFMMDPWWNPAVERQAQDRIHRIGQYKPIR 783
Query: 500 AYRLLAHGTMEEKIYKRQVTKE-GLAARVVDRQQVHRTISKEEMLHLF 546
R + T+EE+I + Q KE V Q+ +++E+M LF
Sbjct: 784 VVRFIIENTVEERILRLQKKKELVFEGTVGGSQEAIGKLTEEDMRFLF 831
>AT5G05130.1 | Symbols: | DNA/RNA helicase protein |
chr5:1512173-1514918 FORWARD LENGTH=862
Length = 862
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 80/167 (47%), Gaps = 14/167 (8%)
Query: 384 KVLVFSQSIPTLDLIELYLSRIPRRGKQGKLWKKGKDWYRLDGRTESSERQKLVEKFNEP 443
K +VFSQ L L+E L G RLDG +R +++ +F P
Sbjct: 708 KSVVFSQFRKMLLLLETPLK------------AAGFTILRLDGAMTVKKRTQVIGEFGNP 755
Query: 444 LNRRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQAIYRAWRYGQKKPVFAYRL 503
L S +A GINL AA+RV + D WNP + QA+ R R GQK+ V R+
Sbjct: 756 ELTGPVVLLASLKASGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIRM 815
Query: 504 LAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEEMLHLFEF 548
+A ++EE++ + Q K+ LA R+Q R ++ E+++ L
Sbjct: 816 IARNSIEERVLELQQKKKNLANEAFKRRQKKDEREVNVEDVVALMSL 862
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 110/231 (47%), Gaps = 32/231 (13%)
Query: 20 VDLGLRTALIVTPVNVLHNWRREFIKWAPSELTPLRIFMLEDVPRDRRAHLLAKWRAKGG 79
+++ +T LIV P +V+ W + + + L+++M R + L K+
Sbjct: 334 MNVSQKTTLIVCPPSVISAWITQLEEHTVPGI--LKVYMYHGGERTDDVNELMKYD---- 387
Query: 80 VFLIGYSAFRNLSFGKNVKDRHMAR-ETCRALQDGPDILVCDEAHMIKNTKADVTQALKQ 138
I + + L+ ++ +D + + E R ++ DEAH IKN A ++ + +
Sbjct: 388 ---IVLTTYGTLAVEESWEDSPVKKMEWLR--------IILDEAHTIKNANAQQSRVVCK 436
Query: 139 VKCQRRIALTGSPLQNNLMEYYCMVDFVR-EGFLGSSHEFRNRFQNPIENGQHTNSTQTD 197
+K RR A+TG+P+QN + Y ++ F+R E F S+ +++ Q P+ GQ +
Sbjct: 437 LKASRRWAVTGTPIQNGSFDLYSLMAFLRFEPFSIKSY-WQSLIQRPL--GQGNKKGLSR 493
Query: 198 VKIMNQRSHILYEELKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRKLY 248
++++ + + K + LPPKTV V+LSP +R+LY
Sbjct: 494 LQVLMATISLRRTKEKSLI----------GLPPKTVETCYVELSPEERQLY 534
>AT1G48310.1 | Symbols: CHR18, CHA18 | chromatin remodeling factor18
| chr1:17848620-17853731 REVERSE LENGTH=673
Length = 673
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 90/190 (47%), Gaps = 15/190 (7%)
Query: 354 LHGKIYKELDQSGKMVLLIDILTMSSDVGDKVLVFSQSIPTLDLIELYLSRIPRRGKQGK 413
L KIY + K+ ++D L + G K LVF+ L+ + +L
Sbjct: 457 LINKIYTD-SAVAKIPAVLDYLENVIEAGCKFLVFAHHQSMLEELHQFLK---------- 505
Query: 414 LWKKGKDWYRLDGRTESSERQKLVEKFNEPLNRRVKCTLISTRAGSLGINLHAANRVVIV 473
KK R+DG T +S RQ LV F + +K ++S RA +GI L AA+ V+
Sbjct: 506 --KKKVGCIRIDGSTPASSRQALVSDFQD--KDEIKAAVLSIRAAGVGITLTAASTVIFA 561
Query: 474 DGSWNPTYDLQAIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVVDRQQV 533
+ SW P +QA RA R GQ V + LLA+ T+++ I+ +K +++D Q+
Sbjct: 562 ELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLANDTVDDIIWDVVQSKLDNLGQMLDGQEN 621
Query: 534 HRTISKEEML 543
++ M+
Sbjct: 622 ALDVASSHMM 631
>AT2G40770.1 | Symbols: | zinc ion binding;DNA binding;helicases;ATP
binding;nucleic acid binding | chr2:17013535-17021315
REVERSE LENGTH=1664
Length = 1664
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 14/223 (6%)
Query: 378 SSDVGDKVLVFSQSIPTLDLIELYLSRIPRRGKQGKLWKKGKDWYRLDGRTESSERQKLV 437
SSD KVLVFS LD++E + K G+ + + SE++
Sbjct: 1445 SSDPQTKVLVFSSWNDVLDVLEHAFAA---NSITCIRMKGGRKSQTAISKFKGSEKETQK 1501
Query: 438 EKFNEPLNRRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQAIYRAWRYGQKKP 497
++ + ++ L+ + G+ G+NL A V++V+ NP + QA+ R R GQ+KP
Sbjct: 1502 TNSHQKEEKSIQVLLLLVQHGANGLNLLEAQHVILVEPLLNPAAEAQAVGRVHRIGQEKP 1561
Query: 498 VFAYRLLAHGTMEEKIYKRQVTKEGLAARVVDR---QQVHRTISKEEMLHLFEFGDDENP 554
+R L GT+EE IYK K + R Q + ++ +++ LF E
Sbjct: 1562 TLVHRFLVSGTVEESIYKLNRNKNTNLSSFSSRNTKNQDQQFLTLKDLESLFASPTAET- 1620
Query: 555 ETLAELDQENGHTCDQIN----PILAGHSLKQTVPHSNGSSSS 593
AE++Q G + + + A + ++ + SN SSS+
Sbjct: 1621 ---AEMEQNPGERQENLRDLPPSVAAALAAERRMKESNASSST 1660
>AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr3:5652839-5655670 REVERSE LENGTH=638
Length = 638
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%)
Query: 452 LISTRAGSLGINLHAANRVVIVDGSWNPTYDLQAIYRAWRYGQKKPVFAYRLLAHGTMEE 511
L+S +AG+LG+N+ AA+ V+++D WNPT + QAI RA R GQ + V R+ T+EE
Sbjct: 511 LMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAIDRAHRIGQTRAVTVTRIAIKNTVEE 570
Query: 512 KIYKRQVTKEGLAA 525
+I K + A
Sbjct: 571 RILTLHERKRNIVA 584
>AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / HNH endonuclease
domain-containing protein | chr5:2491412-2498484 REVERSE
LENGTH=1190
Length = 1190
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 409 GKQGKLWKKGKDWYRLDGRTESSERQKLVEKFNEPLNRRVKCTLISTRAGSLGINLHAAN 468
G Q + KG + R+DG T +RQ V+ F + VK +I AG +G++ AA
Sbjct: 569 GIQEFICDKGIGFVRIDGTTLPRDRQLAVQSFQ--FSSEVKIAIIGVEAGGVGLDFSAAQ 626
Query: 469 RVVIVDGSWNPTYDLQAIYRAWRYGQKKPVFAYRLLAHGTMEE 511
VV ++ P+ LQA RA R GQ V Y A TM+E
Sbjct: 627 NVVFLELPKTPSLLLQAEDRAHRRGQTSAVNVYIFCAKDTMDE 669
>AT3G54460.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / F-box family protein |
chr3:20162050-20167186 REVERSE LENGTH=1378
Length = 1378
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 15/133 (11%)
Query: 383 DKVLVFSQSIPTLDLIELYLSRIPRRGKQGKLWKKGKDWYRLDGRTESSERQKLVEKFNE 442
DKVL+FSQ + + +IE L+ G + ++ +S + K + F
Sbjct: 1194 DKVLIFSQFLEHIHVIEQQLT------------TAGIKFGKMYSPMQSYNKMKALAMFQ- 1240
Query: 443 PLNRRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQAIYRAWRYGQKKPVFAYR 502
N L+ +G+LG++L V +++ W+ + + Q I RA R G K+P+F
Sbjct: 1241 --NDADCMALLMDGSGALGLDLSFVTHVFLMEPIWDKSLEEQVISRAHRMGAKRPIFVET 1298
Query: 503 LLAHGTMEEKIYK 515
L GT+EE++ +
Sbjct: 1299 LTMRGTIEEQMMR 1311