Miyakogusa Predicted Gene
- Lj5g3v1355060.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1355060.1 tr|D7L2Y3|D7L2Y3_ARALL Pentatricopeptide
repeat-containing protein OS=Arabidopsis lyrata subsp.
lyra,26.32,2e-18,PPR_2,Pentatricopeptide repeat;
PPR_1,Pentatricopeptide repeat; PPR,Pentatricopeptide repeat;
SUBFAM,CUFF.55181.1
(575 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 559 e-159
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 333 2e-91
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 266 3e-71
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 237 1e-62
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 3e-61
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 228 7e-60
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 228 1e-59
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 2e-59
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 4e-59
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 5e-58
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 7e-57
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 2e-56
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 2e-55
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 4e-55
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 211 9e-55
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 211 1e-54
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 211 1e-54
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 2e-54
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 5e-54
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 9e-54
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 206 3e-53
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 4e-53
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 205 6e-53
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 9e-53
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 1e-52
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 203 3e-52
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 6e-52
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 201 1e-51
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 201 1e-51
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 5e-51
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 5e-51
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 7e-51
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 198 1e-50
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 1e-50
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 1e-49
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 192 4e-49
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 5e-49
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 7e-49
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 3e-48
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 8e-48
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 9e-48
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 9e-48
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 1e-47
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 187 2e-47
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 2e-47
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 2e-47
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 187 2e-47
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 2e-47
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 3e-47
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 5e-47
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 9e-47
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 185 9e-47
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 184 1e-46
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 4e-46
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 2e-45
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 180 2e-45
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 179 6e-45
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 7e-45
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 7e-45
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 3e-44
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 1e-43
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 1e-43
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 1e-43
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 1e-43
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 1e-43
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 1e-43
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 5e-43
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 1e-42
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 2e-42
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 170 2e-42
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 170 2e-42
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 4e-42
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 168 8e-42
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 1e-41
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 167 3e-41
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 166 3e-41
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 5e-41
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 5e-40
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 7e-40
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 1e-39
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 2e-39
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 6e-39
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 6e-39
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 1e-38
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 157 2e-38
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 157 2e-38
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 157 2e-38
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 3e-38
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 4e-37
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 152 7e-37
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 152 7e-37
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 9e-37
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 150 2e-36
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 149 5e-36
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 146 5e-35
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 1e-34
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 144 2e-34
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 2e-34
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 2e-34
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 2e-34
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 2e-34
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 1e-33
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 2e-33
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 3e-33
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 3e-33
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 140 3e-33
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 4e-33
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 139 6e-33
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 138 9e-33
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 136 4e-32
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 5e-32
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 1e-31
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 1e-31
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 134 2e-31
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 4e-31
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 4e-30
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 4e-30
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 129 5e-30
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 6e-30
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 6e-30
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 7e-30
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 8e-30
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 8e-30
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 2e-29
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 4e-29
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 4e-29
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 5e-29
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 7e-29
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 9e-29
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 9e-29
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 1e-28
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 1e-28
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 3e-28
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 5e-28
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 7e-28
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 7e-28
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 8e-28
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 121 1e-27
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 120 3e-27
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 120 4e-27
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 5e-27
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 1e-25
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 113 3e-25
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 113 4e-25
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 5e-25
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 6e-25
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 112 7e-25
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 7e-24
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 7e-24
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 4e-23
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 6e-23
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 105 6e-23
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 8e-23
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 103 4e-22
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 5e-22
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 102 6e-22
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 1e-21
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 5e-21
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 7e-21
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 8e-21
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 8e-20
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 95 1e-19
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 2e-19
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 94 2e-19
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 94 3e-19
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 5e-19
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 5e-19
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 6e-19
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 91 2e-18
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 91 2e-18
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 8e-18
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 88 1e-17
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 87 3e-17
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 86 8e-17
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 85 1e-16
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 85 1e-16
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 85 2e-16
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 8e-16
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 9e-16
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 81 2e-15
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 80 3e-15
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 80 3e-15
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-15
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 79 8e-15
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 77 3e-14
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 77 3e-14
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 77 3e-14
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 76 7e-14
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 76 8e-14
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 8e-14
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 75 2e-13
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 74 4e-13
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 73 5e-13
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 72 9e-13
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 71 2e-12
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT3G60960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 69 6e-12
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 69 8e-12
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 9e-12
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-11
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 68 2e-11
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 68 2e-11
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 67 2e-11
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 2e-11
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 67 3e-11
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 67 3e-11
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 4e-11
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 4e-11
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 4e-11
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 4e-11
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 66 5e-11
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 7e-11
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 8e-11
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 9e-11
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-09
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 62 1e-09
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 2e-09
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 61 2e-09
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 59 7e-09
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 9e-09
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 59 1e-08
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 59 1e-08
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 58 1e-08
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 57 3e-08
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 6e-08
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 9e-08
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-07
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 55 1e-07
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 53 7e-07
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 51 3e-06
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-06
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 49 8e-06
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 1e-05
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 559 bits (1441), Expect = e-159, Method: Compositional matrix adjust.
Identities = 267/498 (53%), Positives = 355/498 (71%), Gaps = 8/498 (1%)
Query: 66 LQCRSFQGSAVIDRVNEVDHEDWGLESFERRESGELVDPGKPVKP------PPFVRNDGF 119
+C S ID VN DH + E L KP+K P ND
Sbjct: 48 FRCHGLLSSVCIDNVN--DHAERSSEFHHYGVGTNLRARVKPMKQFGLSSDGPITENDEE 105
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
TNN+IL NLC+ G+L A +L+E+MAR +Q+PHFPSC+NL+RGL +I Q+DK I+ +M
Sbjct: 106 TNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVM 165
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
VMSGGVPD IT NM+IG LCK+G++++A+ L+EDMSLSG PD ITYNT+IR MFD GN
Sbjct: 166 VMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNA 225
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
+A+ FWKDQL+ GCPP++ITYTVL+ELVCRYCG+ RA+EVLEDMA+EGCYPDI+TYNSL
Sbjct: 226 EQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSL 285
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS 359
V++ ++G EE VI ++LS G++ N VTYNTL+HSL SH YWD V+++L IM +TS
Sbjct: 286 VNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSY 345
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQ 419
PT +TYNI++NGLCK+ LL RAI + M+ + C PDIVTYNT+L + KEG VD+ I+
Sbjct: 346 CPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIE 405
Query: 420 LLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFC 479
LL LL T C PGL+TYN IDGLA+ G M+ A ELY +M+ GI PD+IT SL +GFC
Sbjct: 406 LLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFC 465
Query: 480 GVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEK 539
+ +EEA ++LKE + I+ + YR VI GLCK++++++AI+ +++M+ CKPDE
Sbjct: 466 RANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDET 525
Query: 540 IYDALIKAVADSGMVKEA 557
IY A++K V + GM EA
Sbjct: 526 IYTAIVKGVEEMGMGSEA 543
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 175/375 (46%), Gaps = 4/375 (1%)
Query: 204 LKSAVDLVEDMSLSGCSP----DAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLI 259
L++ V ++ LS P D T N I+ + G +A + R P+
Sbjct: 81 LRARVKPMKQFGLSSDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFP 140
Query: 260 TYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNL 319
+ + L+ + R +A+ +L M M G PD ITYN ++ K+G +++ ++
Sbjct: 141 SCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDM 200
Query: 320 LSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLL 379
G P+ +TYNT+I + +G + + + PP +TY +++ +C+
Sbjct: 201 SLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGS 260
Query: 380 DRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIA 439
RAI + M E C+PDIVTYN+L++ C+ G ++E ++ + VTYN
Sbjct: 261 ARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTL 320
Query: 440 IDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDE 499
+ L + +E+ + M P IT++ L G C L A++ +M ++
Sbjct: 321 LHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKC 380
Query: 500 KIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEAND 559
Y V+ + K+ VD AI+ L L+ + C P Y+++I +A G++K+A +
Sbjct: 381 LPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALE 440
Query: 560 LHQRLIEWKILKTEI 574
L+ ++++ I +I
Sbjct: 441 LYHQMLDAGIFPDDI 455
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 333 bits (854), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 183/494 (37%), Positives = 271/494 (54%), Gaps = 39/494 (7%)
Query: 113 FVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKG 172
F D +NN + Q + T G L + +E M +P CT LIRG ++G+ K
Sbjct: 98 FALEDVESNNHLRQMVRT-GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKA 156
Query: 173 CKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRG 232
KI+ I+ SG VPDVIT N++I G CK G + +A+ +++ MS+S PD +TYNTI+R
Sbjct: 157 AKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRS 213
Query: 233 MFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPD 292
+ D G +A+ L++ C P +ITYT+LIE CR G A+++L++M GC PD
Sbjct: 214 LCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPD 273
Query: 293 IITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLE 352
++TYN LV+ K+G +E ++++ S G QPN +T+N ++ S+ S G W + +L
Sbjct: 274 VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA 333
Query: 353 IMNETSSPPTRVTYNIMLNGLCKSGLL--------------------------------- 379
M P+ VT+NI++N LC+ GLL
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEK 393
Query: 380 --DRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYN 437
DRAI MVS C+PDIVTYNT+L+ LCK+G V++ +++L L+ CSP L+TYN
Sbjct: 394 KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 453
Query: 438 IAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKK 497
IDGLA+ G A +L EM K + PD IT+SSL G +++EA++ E +
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513
Query: 498 DEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
+ + ++LGLCK R+ D AI L M+ CKP+E Y LI+ +A GM KEA
Sbjct: 514 GIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEA 573
Query: 558 NDLHQRLIEWKILK 571
+L L ++K
Sbjct: 574 LELLNELCNKGLMK 587
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 133/395 (33%), Positives = 213/395 (53%), Gaps = 6/395 (1%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
V D T N IL++LC G+L A +++ M ++ P + T LI + +
Sbjct: 200 VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 259
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
K+++ M G PDV+T N+++ G+CK G L A+ + DM SGC P+ IT+N I+R M
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
G + +A D LRKG P ++T+ +LI +CR RA+++LE M GC P+
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS 379
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
++YN L+ K+ + + ++SRG P+ VTYNT++ +L G V+D +EI
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGK---VEDAVEI 436
Query: 354 MNETSS---PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCK 410
+N+ SS P +TYN +++GL K+G +AI L M ++ PD +TY++L+ GL +
Sbjct: 437 LNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496
Query: 411 EGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEIT 470
EG VDE I+ + P VT+N + GL + + A + MI +G P+E +
Sbjct: 497 EGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETS 556
Query: 471 HSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTA 505
++ L G +EA+ELL E+ K K +A
Sbjct: 557 YTILIEGLAYEGMAKEALELLNELCNKGLMKKSSA 591
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 5/169 (2%)
Query: 386 YSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLAR 445
YS++ S D+ + N L + + G ++EG + L + P ++ I G R
Sbjct: 91 YSSVNSSFALEDVES-NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCR 149
Query: 446 MGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTA 505
+G A ++ + G G VPD IT++ + G+C ++ A+ +L M + +
Sbjct: 150 LGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVV---T 206
Query: 506 YRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVA-DSGM 553
Y ++ LC K+ A++ LD M++ C PD Y LI+A DSG+
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGV 255
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/443 (32%), Positives = 233/443 (52%), Gaps = 1/443 (0%)
Query: 123 KILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMS 182
K+++ T + A R++EI+ + Q P + LI G K+ +ID ++++ M
Sbjct: 129 KLIKGFFTLRNIPKAVRVMEILEKFGQ-PDVFAYNALINGFCKMNRIDDATRVLDRMRSK 187
Query: 183 GGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEA 242
PD +T N++IG LC RG L A+ ++ + C P ITY +I +G +EA
Sbjct: 188 DFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEA 247
Query: 243 VSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSF 302
+ + L +G P + TY +I +C+ RA E++ ++ ++GC PD+I+YN L+
Sbjct: 248 LKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRA 307
Query: 303 TAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPT 362
QG +EE +++ + S PN VTY+ LI +L G + ++L++M E P
Sbjct: 308 LLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPD 367
Query: 363 RVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLY 422
+Y+ ++ C+ G LD AI TM+S+ C PDIV YNT+L+ LCK G D+ +++
Sbjct: 368 AYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFG 427
Query: 423 LLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVD 482
L CSP +YN L G A + EM+ GI PDEIT++S+ C
Sbjct: 428 KLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREG 487
Query: 483 QLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYD 542
++EA ELL +M + Y V+LG CK +++ AI L+ MV + C+P+E Y
Sbjct: 488 MVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYT 547
Query: 543 ALIKAVADSGMVKEANDLHQRLI 565
LI+ + +G EA +L L+
Sbjct: 548 VLIEGIGFAGYRAEAMELANDLV 570
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 118/391 (30%), Positives = 206/391 (52%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T N ++ +LC+RG+L A +++ + + P + T LI + G +D+ K++
Sbjct: 192 DTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLM 251
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
+ M+ G PD+ T N +I G+CK G + A ++V ++ L GC PD I+YN ++R + ++
Sbjct: 252 DEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQ 311
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
G + E + C P ++TY++LI +CR A+ +L+ M +G PD +Y
Sbjct: 312 GKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSY 371
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
+ L++ ++G + + ++S G P+ V YNT++ +L +G D ++ + E
Sbjct: 372 DPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGE 431
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDE 416
P +YN M + L SG RA+ + M+S PD +TYN+++S LC+EG VDE
Sbjct: 432 VGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDE 491
Query: 417 GIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAW 476
+LL + P +VTYNI + G + +E A + M+G G P+E T++ L
Sbjct: 492 AFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIE 551
Query: 477 GFCGVDQLEEAMELLKEMHKKDEKIKHTAYR 507
G EAMEL ++ + D +++ R
Sbjct: 552 GIGFAGYRAEAMELANDLVRIDAISEYSFKR 582
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 173/333 (51%), Gaps = 7/333 (2%)
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIE---LVCRYCGAIRALEVLEDMAMEGCYPDI 293
GN+ E++ + +RKG P +I T LI+ + A+R +E+LE PD+
Sbjct: 103 GNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ----PDV 158
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
YN+L++ K ++ V+ + S+ P+ VTYN +I SL S G D VL
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
+ + PT +TY I++ G +D A+ L M+S PD+ TYNT++ G+CKEG
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSS 473
VD +++ L C P +++YNI + L G E ++L ++M + P+ +T+S
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 474 LAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSR 533
L C ++EEAM LLK M +K +Y +I C++ ++D+AI+ L+ M+
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 534 CKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
C PD Y+ ++ + +G +A ++ +L E
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGE 431
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 115/266 (43%), Gaps = 36/266 (13%)
Query: 303 TAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPT 362
+ + G Y E+ ++ ++ +G P+ + LI + V+EI+ E P
Sbjct: 99 SCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEIL-EKFGQPD 157
Query: 363 RVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLY 422
YN ++NG CK +D A + M S+ PD VTYN ++ LC G +D +++L
Sbjct: 158 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217
Query: 423 LLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVD 482
L NC P ++TY I I+ G GVD
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEG--------------------------------GVD 245
Query: 483 QLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYD 542
EA++L+ EM + K Y +I G+CK+ VD A + + + C+PD Y+
Sbjct: 246 ---EALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYN 302
Query: 543 ALIKAVADSGMVKEANDLHQRLIEWK 568
L++A+ + G +E L ++ K
Sbjct: 303 ILLRALLNQGKWEEGEKLMTKMFSEK 328
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 144/467 (30%), Positives = 238/467 (50%), Gaps = 15/467 (3%)
Query: 119 FTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINI 178
FT N +++ C G + A L + M K +P+ + LI G K+ +ID G K++
Sbjct: 206 FTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRS 265
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN 238
M + G P++I+ N+VI GLC+ G +K ++ +M+ G S D +TYNT+I+G +GN
Sbjct: 266 MALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGN 325
Query: 239 FNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNS 298
F++A+ + LR G P +ITYT LI +C+ RA+E L+ M + G P+ TY +
Sbjct: 326 FHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTT 385
Query: 299 LVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETS 358
LV +++G E Y V+ + G P+ VTYN LI+ G + VLE M E
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445
Query: 359 SPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGI 418
P V+Y+ +L+G C+S +D A+ + MV + PD +TY++L+ G C++ E
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC 505
Query: 419 QLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGF 478
L + P TY I+ G +E A +L++EM+ KG++PD +T+S L G
Sbjct: 506 DLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGL 565
Query: 479 CGVDQLEEAMELLKEM------------HKKDEKIKHTAYRCV---ILGLCKQRKVDIAI 523
+ EA LL ++ H E + ++ V I G C + + A
Sbjct: 566 NKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEAD 625
Query: 524 QALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKIL 570
Q + M+ KPD Y+ +I +G +++A L++ +++ L
Sbjct: 626 QVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFL 672
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 217/413 (52%), Gaps = 1/413 (0%)
Query: 159 LIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCK-RGYLKSAVDLVEDMSLS 217
+++ ++ IDK I+++ G +P V++ N V+ + + + A ++ ++M S
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199
Query: 218 GCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRA 277
SP+ TYN +IRG GN + A++ + KGC P ++TY LI+ C+
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 278 LEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHS 337
++L MA++G P++I+YN +++ ++G +E V++ + RG + VTYNTLI
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319
Query: 338 LSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPD 397
G + + M P+ +TY +++ +CK+G ++RA+ M P+
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPN 379
Query: 398 IVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYS 457
TY TL+ G ++G+++E ++L + SP +VTYN I+G G ME A +
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLE 439
Query: 458 EMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQR 517
+M KG+ PD +++S++ GFC ++EA+ + +EM +K K Y +I G C+QR
Sbjct: 440 DMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQR 499
Query: 518 KVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKIL 570
+ A + M+R PDE Y ALI A G +++A LH ++E +L
Sbjct: 500 RTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 131/435 (30%), Positives = 209/435 (48%), Gaps = 16/435 (3%)
Query: 147 KSQI-PHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLK 205
+SQ+ P+ + LIRG G ID + + M G +P+V+T N +I G CK +
Sbjct: 198 ESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKID 257
Query: 206 SAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLI 265
L+ M+L G P+ I+YN +I G+ +G E + R+G +TY LI
Sbjct: 258 DGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLI 317
Query: 266 ELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQ 325
+ C+ +AL + +M G P +ITY SL+ K G + + RG+
Sbjct: 318 KGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLC 377
Query: 326 PNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISL 385
PN TY TL+ S GY + VL MN+ P+ VTYN ++NG C +G ++ AI++
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAV 437
Query: 386 YSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLAR 445
M + PD+V+Y+T+LSG C+ VDE +++ + P +TY+ I G
Sbjct: 438 LEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCE 497
Query: 446 MGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTA 505
+ A +LY EM+ G+ PDE T+++L +C LE+A++L EM +K
Sbjct: 498 QRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVT 557
Query: 506 YRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYD---------------ALIKAVAD 550
Y +I GL KQ + A + L + P + Y +LIK
Sbjct: 558 YSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCM 617
Query: 551 SGMVKEANDLHQRLI 565
GM+ EA+ + + ++
Sbjct: 618 KGMMTEADQVFESML 632
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 169/369 (45%), Gaps = 15/369 (4%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T N +++ C G A + M R P + T+LI + K G +++ + +
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
+ M + G P+ T ++ G ++GY+ A ++ +M+ +G SP +TYN +I G
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
G +A++ +D KG P +++Y+ ++ CR AL V +M +G PD ITY
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITY 488
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
+SL+ +Q +E + +L G+ P+ TY LI++ G + + M E
Sbjct: 489 SSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE 548
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLS---------- 406
P VTY++++NGL K A L + E P VTY+TL+
Sbjct: 549 KGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSV 608
Query: 407 -----GLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIG 461
G C +G + E Q+ + G N P YNI I G R G + A LY EM+
Sbjct: 609 VSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVK 668
Query: 462 KGIVPDEIT 470
G + +T
Sbjct: 669 SGFLLHTVT 677
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 101/205 (49%), Gaps = 1/205 (0%)
Query: 362 TRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF-VDEGIQL 420
T +++++ + L+D+A+S+ + P +++YN +L + + +
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192
Query: 421 LYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCG 480
+ + SP + TYNI I G G+++ A L+ +M KG +P+ +T+++L G+C
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252
Query: 481 VDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKI 540
+ ++++ +LL+ M K + +Y VI GLC++ ++ L M R DE
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312
Query: 541 YDALIKAVADSGMVKEANDLHQRLI 565
Y+ LIK G +A +H ++
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEML 337
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 117/285 (41%), Gaps = 23/285 (8%)
Query: 96 RESGELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPS 155
R E+V+ G +KP D T + ++Q C + R A L E M R P +
Sbjct: 471 RVKREMVEKG--IKP------DTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFT 522
Query: 156 CTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMS 215
T LI G ++K ++ N MV G +PDV+T +++I GL K+ + A L+ +
Sbjct: 523 YTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLF 582
Query: 216 LSGCSPDAITYNT---------------IIRGMFDKGNFNEAVSFWKDQLRKGCPPYLIT 260
P +TY+T +I+G KG EA ++ L K P
Sbjct: 583 YEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTA 642
Query: 261 YTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLL 320
Y ++I CR +A + ++M G +T +LV K+G E VI ++L
Sbjct: 643 YNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVL 702
Query: 321 SRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVT 365
A L+ G D V DVL M + P ++
Sbjct: 703 RSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 89/198 (44%), Gaps = 4/198 (2%)
Query: 365 TYNIMLNGLCKSGLLDRAISLYSTMVSES---CFPDIVTYNTLLSGLCKEGFVDEGIQLL 421
T I+ + L D SL + E+ C+ ++ ++ + +D+ + ++
Sbjct: 98 TAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIV 157
Query: 422 YLLTGTNCSPGLVTYNIAIDGLARMG-SMESAKELYSEMIGKGIVPDEITHSSLAWGFCG 480
+L PG+++YN +D R ++ A+ ++ EM+ + P+ T++ L GFC
Sbjct: 158 HLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCF 217
Query: 481 VDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKI 540
++ A+ L +M K Y +I G CK RK+D + L M +P+
Sbjct: 218 AGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLIS 277
Query: 541 YDALIKAVADSGMVKEAN 558
Y+ +I + G +KE +
Sbjct: 278 YNVVINGLCREGRMKEVS 295
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 128/453 (28%), Positives = 232/453 (51%), Gaps = 3/453 (0%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
+ +D +T + + C R +L A ++ M + P + ++L+ G +I
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
+++ MV G PD T +I GL AV LV+ M GC PD +TY T++ G+
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
+G+ + A++ ++ + +I+ +C+Y A+++ +M +G P++
Sbjct: 234 CKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNV 293
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
+TYNSL++ G + + ++SN+L + + PN VT+N LI + G + + E
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEE 353
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
M + S P +TYN+++NG C LD A ++ MVS+ C P+I TYNTL++G CK
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSS 473
V++G++L ++ VTY I G + G +SA+ ++ +M+ + D +T+S
Sbjct: 414 VEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSI 473
Query: 474 LAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSR 533
L G C +L+ A+ + K + K + ++ Y +I G+CK KV +A DL
Sbjct: 474 LLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVG---EAWDLFCSLS 530
Query: 534 CKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
KPD Y+ +I + +++EA+DL +++ E
Sbjct: 531 IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKE 563
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 194/407 (47%)
Query: 163 LIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPD 222
L I ++D + MV S P ++ N ++ + K + + L E M G S D
Sbjct: 58 LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHD 117
Query: 223 AITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLE 282
TY+ I + + A++ ++ G P ++T + L+ C A+ +++
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD 177
Query: 283 DMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHG 342
M G PD T+ +L+ E ++ ++ RG QP+ VTY T+++ L G
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 343 YWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYN 402
D ++L M V +N +++ LCK ++ A+ L++ M ++ P++VTYN
Sbjct: 238 DIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYN 297
Query: 403 TLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGK 462
+L++ LC G + +LL + +P +VT+N ID + G + A++L+ EMI +
Sbjct: 298 SLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR 357
Query: 463 GIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIA 522
I PD IT++ L GFC ++L+EA ++ K M KD Y +I G CK ++V+
Sbjct: 358 SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDG 417
Query: 523 IQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKI 569
++ M + + Y +I+ +G A + ++++ ++
Sbjct: 418 VELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRV 464
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 161/351 (45%), Gaps = 3/351 (0%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N I+ +LC + A L M K P+ + +LI L G+ ++++ M+
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
P+V+T N +I K G L A L E+M PD ITYN +I G +E
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 242 AVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVS 301
A +K + K C P + TY LI C+ +E+ +M+ G + +TY +++
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441
Query: 302 FTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPP 361
+ G + +V ++S + + +TY+ L+H L S+G D + + + ++
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL 501
Query: 362 TRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLL 421
YN M+ G+CK+G + A L+ ++ S PD+VTYNT++SGLC + + E L
Sbjct: 502 NIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLF 558
Query: 422 YLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHS 472
+ P TYN I R ++ EL EM G V D T S
Sbjct: 559 RKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTIS 609
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%)
Query: 368 IMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGT 427
I+ N L +D A+ L+ MV FP IV +N LLS + K + I L +
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 428 NCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEA 487
S L TY+I I+ R + A + ++M+ G PD +T SSL G+C ++ +A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 488 MELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKA 547
+ L+ +M + K + +I GL K A+ +D MV+ C+PD Y ++
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 548 VADSGMVKEANDLHQRLIEWKILKTEII 575
+ G + A +L ++ +I +I
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVI 260
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 228 bits (582), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 128/448 (28%), Positives = 230/448 (51%)
Query: 119 FTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINI 178
+T N ++ C R ++ A L+ M + P + ++L+ G +I +++
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN 238
MV G PD IT +I GL AV LV+ M GC P+ +TY ++ G+ +G+
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 239 FNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNS 298
+ A++ ++ + +I+ +C+Y AL + ++M +G P+++TY+S
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300
Query: 299 LVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETS 358
L+S G + + ++S+++ + + PN VT+N LI + G + + + + M + S
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 359 SPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGI 418
P TYN ++NG C LD+A ++ MVS+ CFPD+VTYNTL+ G CK V++G
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 419 QLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGF 478
+L ++ VTY I GL G ++A++++ +M+ G+ PD +T+S L G
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
Query: 479 CGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDE 538
C +LE+A+E+ M K + K+ Y +I G+CK KVD + KP+
Sbjct: 481 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 540
Query: 539 KIYDALIKAVADSGMVKEANDLHQRLIE 566
Y+ +I + +++EA L +++ E
Sbjct: 541 VTYNTMISGLCSKRLLQEAYALLKKMKE 568
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 207/428 (48%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T + +L C R+ A L++ M P + T LI GL + + +++ M
Sbjct: 157 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 216
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
V G P+++T +V+ GLCKRG A++L+ M + D + +NTII + +
Sbjct: 217 VQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 276
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
++A++ +K+ KG P ++TY+ LI +C Y A ++L DM + P+++T+N+L
Sbjct: 277 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 336
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS 359
+ K+G + E + +++ R + P+ TYN+L++ H D + E M
Sbjct: 337 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 396
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQ 419
P VTYN ++ G CKS ++ L+ M D VTY TL+ GL +G D +
Sbjct: 397 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 456
Query: 420 LLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFC 479
+ + P ++TY+I +DGL G +E A E++ M I D ++++ G C
Sbjct: 457 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 516
Query: 480 GVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEK 539
++++ +L + K K Y +I GLC +R + A L M P+
Sbjct: 517 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSG 576
Query: 540 IYDALIKA 547
Y+ LI+A
Sbjct: 577 TYNTLIRA 584
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 187/382 (48%)
Query: 115 RNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCK 174
R D T ++ L + A L++ M ++ P+ + ++ GL K G D
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 246
Query: 175 IINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMF 234
++N M + DV+ N +I LCK ++ A++L ++M G P+ +TY+++I +
Sbjct: 247 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 306
Query: 235 DKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDII 294
G +++A D + K P L+T+ LI+ + + A ++ +DM PDI
Sbjct: 307 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF 366
Query: 295 TYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIM 354
TYNSLV+ ++ + ++S+ P+ VTYNTLI + ++ M
Sbjct: 367 TYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM 426
Query: 355 NETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFV 414
+ VTY ++ GL G D A ++ MVS+ PDI+TY+ LL GLC G +
Sbjct: 427 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 486
Query: 415 DEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSL 474
++ +++ + + + Y I+G+ + G ++ +L+ + KG+ P+ +T++++
Sbjct: 487 EKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 546
Query: 475 AWGFCGVDQLEEAMELLKEMHK 496
G C L+EA LLK+M +
Sbjct: 547 ISGLCSKRLLQEAYALLKKMKE 568
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 185/398 (46%)
Query: 168 QIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYN 227
++D + MV S +P ++ N ++ + K + L E M TYN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 228 TIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAME 287
+I + + A++ ++ G P ++T + L+ C A+ +++ M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 288 GCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGV 347
G PD IT+ +L+ E ++ ++ RG QPN VTY +++ L G D
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 348 DDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSG 407
++L M V +N +++ LCK +D A++L+ M ++ P++VTY++L+S
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 408 LCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPD 467
LC G + QLL + +P LVT+N ID + G A++LY +MI + I PD
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Query: 468 EITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALD 527
T++SL GFC D+L++A ++ + M KD Y +I G CK ++V+ +
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR 424
Query: 528 LMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLI 565
M D Y LI+ + G A + ++++
Sbjct: 425 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 462
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 165/382 (43%), Gaps = 35/382 (9%)
Query: 124 ILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSG 183
++ LC RG A L+ M +I L K +D + M G
Sbjct: 231 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 290
Query: 184 GVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAV 243
P+V+T + +I LC G A L+ DM +P+ +T+N +I +G F EA
Sbjct: 291 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 350
Query: 244 SFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFT 303
+ D +++ P + TY L+ C + +A ++ E M + C+PD++TYN+L+
Sbjct: 351 KLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 410
Query: 304 AKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTR 363
K E+ + + RG+ + VTY TLI L G D V + M PP
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 470
Query: 364 VTYNIMLNGLCKSGLLDRA---------------ISLYSTMVSESCF------------- 395
+TY+I+L+GLC +G L++A I +Y+TM+ C
Sbjct: 471 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 530
Query: 396 -------PDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGS 448
P++VTYNT++SGLC + + E LL + P TYN I R G
Sbjct: 531 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGD 590
Query: 449 MESAKELYSEMIGKGIVPDEIT 470
++ EL EM V D T
Sbjct: 591 KAASAELIREMRSCRFVGDAST 612
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 153/339 (45%), Gaps = 13/339 (3%)
Query: 74 SAVIDRVNEVDHEDWGLESFERRESGELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGR 133
+ +ID + + H D L F+ E+ K ++P + T + ++ LC+ GR
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMET-------KGIRP------NVVTYSSLISCLCSYGR 310
Query: 134 LMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNM 193
A++L+ M K P+ + LI +K G+ + K+ + M+ PD+ T N
Sbjct: 311 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNS 370
Query: 194 VIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKG 253
++ G C L A + E M C PD +TYNT+I+G + +++ +G
Sbjct: 371 LVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRG 430
Query: 254 CPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETY 313
+TYT LI+ + A +V + M +G PDI+TY+ L+ G E+
Sbjct: 431 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 490
Query: 314 LVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGL 373
V + ++ + Y T+I + G D D+ ++ P VTYN M++GL
Sbjct: 491 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 550
Query: 374 CKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEG 412
C LL A +L M + P+ TYNTL+ ++G
Sbjct: 551 CSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 589
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 128/284 (45%), Gaps = 10/284 (3%)
Query: 291 PDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAV-----TYNTLIHSLSSHGYWD 345
P I+ +N L+S AK ++ +VIS L MQ + TYN LI+
Sbjct: 83 PSIVEFNKLLSAIAKMKKFD---VVIS--LGEKMQRLEIVHGLYTYNILINCFCRRSQIS 137
Query: 346 GVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLL 405
+L M + P+ VT + +LNG C + A++L MV PD +T+ TL+
Sbjct: 138 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 197
Query: 406 SGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIV 465
GL E + L+ + C P LVTY + ++GL + G + A L ++M I
Sbjct: 198 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE 257
Query: 466 PDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQA 525
D + +++ C +++A+ L KEM K + Y +I LC + A Q
Sbjct: 258 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 317
Query: 526 LDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKI 569
L M+ + P+ ++ALI A G EA L+ +I+ I
Sbjct: 318 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 92/202 (45%), Gaps = 1/202 (0%)
Query: 368 IMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGT 427
I+ NGL LD AI L+ MV P IV +N LLS + K D I L +
Sbjct: 56 ILRNGL-HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 114
Query: 428 NCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEA 487
GL TYNI I+ R + A L +M+ G P +T SSL G+C ++ +A
Sbjct: 115 EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 488 MELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKA 547
+ L+ +M + + + +I GL K A+ +D MV+ C+P+ Y ++
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 548 VADSGMVKEANDLHQRLIEWKI 569
+ G A +L ++ KI
Sbjct: 235 LCKRGDTDLALNLLNKMEAAKI 256
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 80/203 (39%), Gaps = 35/203 (17%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T N +++ C R+ L M+ + + + T LI+GL G D K+
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 458
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAV---------------------------- 208
MV G PD++T ++++ GLC G L+ A+
Sbjct: 459 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 518
Query: 209 -------DLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITY 261
DL +SL G P+ +TYNT+I G+ K EA + K G P TY
Sbjct: 519 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTY 578
Query: 262 TVLIELVCRYCGAIRALEVLEDM 284
LI R + E++ +M
Sbjct: 579 NTLIRAHLRDGDKAASAELIREM 601
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 124/453 (27%), Positives = 237/453 (52%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
+ ++ +T + ++ C R +L A ++ M + P+ + ++L+ G +I +
Sbjct: 112 IPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAV 171
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
+++ M ++G P+ +T N +I GL A+ L++ M GC PD +TY ++ G+
Sbjct: 172 ALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL 231
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
+G+ + A + + P ++ Y +I+ +C+Y AL + ++M +G P++
Sbjct: 232 CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNV 291
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
+TY+SL+S G + + ++S+++ R + P+ T++ LI + G + + +
Sbjct: 292 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
M + S P+ VTY+ ++NG C LD A ++ MVS+ CFPD+VTYNTL+ G CK
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 411
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSS 473
V+EG+++ ++ VTYNI I GL + G + A+E++ EM+ G+ P+ +T+++
Sbjct: 412 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471
Query: 474 LAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSR 533
L G C +LE+AM + + + + + Y +I G+CK KV+ +
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 531
Query: 534 CKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
KPD Y+ +I G +EA+ L + + E
Sbjct: 532 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/379 (30%), Positives = 181/379 (47%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T ++ LC RG A L+ M + P +I GL K +D +
Sbjct: 220 DLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLF 279
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
M G P+V+T + +I LC G A L+ DM +PD T++ +I +
Sbjct: 280 KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE 339
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
G EA + + +++ P ++TY+ LI C + A ++ E M + C+PD++TY
Sbjct: 340 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTY 399
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
N+L+ K EE V + RG+ N VTYN LI L G D ++ + M
Sbjct: 400 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 459
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDE 416
PP +TYN +L+GLCK+G L++A+ ++ + P I TYN ++ G+CK G V++
Sbjct: 460 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519
Query: 417 GIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAW 476
G L L+ P +V YN I G R GS E A L+ EM G +P+ +++L
Sbjct: 520 GWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIR 579
Query: 477 GFCGVDQLEEAMELLKEMH 495
E + EL+KEM
Sbjct: 580 ARLRDGDREASAELIKEMR 598
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 112/361 (31%), Positives = 166/361 (45%)
Query: 204 LKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTV 263
L AV L +M S P I ++ ++ + F+ +S + G P TY++
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 264 LIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRG 323
LI CR AL VL M G P+I+T +SL++ E ++ + G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 324 MQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAI 383
QPN VT+NTLIH L H +++ M P VTY +++NGLCK G D A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 384 SLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGL 443
+L + M P ++ YNT++ GLCK +D+ + L + P +VTY+ I L
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 444 ARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKH 503
G A L S+MI + I PD T S+L F +L EA +L EM K+
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 504 TAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQR 563
Y +I G C ++D A Q + MV C PD Y+ LIK V+E ++ +
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 564 L 564
+
Sbjct: 422 M 422
Score = 165 bits (418), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 165/349 (47%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N I+ LC + A L + M K P+ + ++LI L G+ ++++ M+
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
PDV T + +I K G L A L ++M P +TY+++I G +E
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 242 AVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVS 301
A ++ + K C P ++TY LI+ C+Y +EV +M+ G + +TYN L+
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 302 FTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPP 361
+ G + + ++S G+ PN +TYNTL+ L +G + V E + + P
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Query: 362 TRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLL 421
T TYNIM+ G+CK+G ++ L+ + + PD+V YNT++SG C++G +E L
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559
Query: 422 YLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEIT 470
+ P YN I R G E++ EL EM G D T
Sbjct: 560 KEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 608
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 194/398 (48%)
Query: 168 QIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYN 227
++D + MV S P +I + ++ + K + L E M G + TY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 228 TIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAME 287
+I + A++ ++ G P ++T + L+ C A+ +++ M +
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 288 GCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGV 347
G P+ +T+N+L+ E +I ++++G QP+ VTY +++ L G D
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 348 DDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSG 407
++L M + P + YN +++GLCK +D A++L+ M ++ P++VTY++L+S
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 408 LCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPD 467
LC G + +LL + +P + T++ ID + G + A++LY EM+ + I P
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 468 EITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALD 527
+T+SSL GFC D+L+EA ++ + M K Y +I G CK ++V+ ++
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420
Query: 528 LMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLI 565
M + + Y+ LI+ + +G A ++ + ++
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 180/387 (46%), Gaps = 19/387 (4%)
Query: 61 LAQRRLQCRSFQGSAVIDRVNEVDHEDWGLESFERRESGELVDPGKPVKPPPFVRNDGFT 120
+ Q +L+ + +ID + + H D L F+ E+ K ++P + T
Sbjct: 247 MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMET-------KGIRP------NVVT 293
Query: 121 NNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMV 180
+ ++ LC GR A+RL+ M + P + + LI +K G++ + K+ + MV
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 181 MSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFN 240
P ++T + +I G C L A + E M C PD +TYNT+I+G
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 413
Query: 241 EAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLV 300
E + +++ ++G +TY +LI+ + + A E+ ++M +G P+I+TYN+L+
Sbjct: 414 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473
Query: 301 SFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSP 360
K G E+ +V L M+P TYN +I + G + D+ ++
Sbjct: 474 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK 533
Query: 361 PTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQL 420
P V YN M++G C+ G + A +L+ M + P+ YNTL+ ++G + +L
Sbjct: 534 PDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAEL 593
Query: 421 LYLL-----TGTNCSPGLVTYNIAIDG 442
+ + G + GLVT N+ DG
Sbjct: 594 IKEMRSCGFAGDASTIGLVT-NMLHDG 619
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 134/293 (45%)
Query: 277 ALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIH 336
A+ + +M +P II ++ L+S AK ++ + + + G+ N TY+ LI+
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 337 SLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFP 396
VL M + P VT + +LNG C S + A++L M P
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 397 DIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELY 456
+ VT+NTL+ GL E + L+ + C P LVTY + ++GL + G + A L
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
Query: 457 SEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQ 516
++M + P + ++++ G C +++A+ L KEM K + Y +I LC
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Query: 517 RKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKI 569
+ A + L M+ + PD + ALI A G + EA L+ +++ I
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 128/450 (28%), Positives = 229/450 (50%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D ++ N ++ C R +L A ++ M + P + ++L+ G +I + ++
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 173
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
+ M + P+ +T N +I GL AV L++ M GC PD TY T++ G+ +
Sbjct: 174 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 233
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
G+ + A+S K + ++ YT +I+ +C Y AL + +M +G P+++TY
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
NSL+ G + + ++S+++ R + PN VT++ LI + G + + + M +
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDE 416
S P TY+ ++NG C LD A ++ M+S+ CFP++VTYNTL+ G CK V+E
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 417 GIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAW 476
G++L ++ VTYN I GL + G + A++++ +M+ G+ PD IT+S L
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473
Query: 477 GFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKP 536
G C +LE+A+ + + + K + Y +I G+CK KV+ + KP
Sbjct: 474 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 533
Query: 537 DEKIYDALIKAVADSGMVKEANDLHQRLIE 566
+ IY +I G+ +EA+ L + + E
Sbjct: 534 NVIIYTTMISGFCRKGLKEEADALFREMKE 563
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 203/436 (46%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T + +L C R+ A L++ M P+ + LI GL + + +I
Sbjct: 149 DIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALI 208
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
+ MV G PD+ T V+ GLCKRG + A+ L++ M D + Y TII + +
Sbjct: 209 DRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNY 268
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
N N+A++ + + KG P ++TY LI +C Y A +L DM P+++T+
Sbjct: 269 KNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF 328
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
++L+ K+G E + ++ R + P+ TY++LI+ H D + E+M
Sbjct: 329 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 388
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDE 416
P VTYN ++ G CK+ ++ + L+ M + VTYNTL+ GL + G D
Sbjct: 389 KDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDM 448
Query: 417 GIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAW 476
++ + P ++TY+I +DGL + G +E A ++ + + PD T++ +
Sbjct: 449 AQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIE 508
Query: 477 GFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKP 536
G C ++E+ +L + K K Y +I G C++ + A M P
Sbjct: 509 GMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP 568
Query: 537 DEKIYDALIKAVADSG 552
+ Y+ LI+A G
Sbjct: 569 NSGTYNTLIRARLRDG 584
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 191/398 (47%)
Query: 168 QIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYN 227
++D + MV S +P ++ N ++ + K + L E M S D +YN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 228 TIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAME 287
+I + A++ ++ G P ++T + L+ C A+ +++ M +
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 288 GCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGV 347
P+ +T+N+L+ E +I +++RG QP+ TY T+++ L G D
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 348 DDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSG 407
+L+ M + V Y +++ LC ++ A++L++ M ++ P++VTYN+L+
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 408 LCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPD 467
LC G + +LL + +P +VT++ ID + G + A++LY EMI + I PD
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 468 EITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALD 527
T+SSL GFC D+L+EA + + M KD Y +I G CK ++V+ ++
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 528 LMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLI 565
M + + Y+ LI+ + +G A + ++++
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 165/349 (47%)
Query: 124 ILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSG 183
I+ LC + A L M K P+ + +LIR L G+ ++++ M+
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 184 GVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAV 243
P+V+T + +I K G L A L ++M PD TY+++I G +EA
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 244 SFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFT 303
++ + K C P ++TY LI+ C+ +E+ +M+ G + +TYN+L+
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 304 AKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTR 363
+ G + + ++S G+ P+ +TY+ L+ L +G + V E + ++ P
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 500
Query: 364 VTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYL 423
TYNIM+ G+CK+G ++ L+ ++ + P+++ Y T++SG C++G +E L
Sbjct: 501 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 560
Query: 424 LTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHS 472
+ P TYN I R G ++ EL EM G V D T S
Sbjct: 561 MKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTIS 609
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 138/265 (52%), Gaps = 2/265 (0%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T + ++ G+L+ A +L + M ++S P + ++LI G ++D+ + +M
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
+ P+V+T N +I G CK ++ ++L +MS G + +TYNT+I+G+F G+
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
+ A +K + G PP +ITY++L++ +C+Y +AL V E + PDI TYN +
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS 359
+ K G E+ + + +L +G++PN + Y T+I G + D + M E +
Sbjct: 507 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 566
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAIS 384
P TYN ++ + G D+A S
Sbjct: 567 LPNSGTYNTLIRARLRDG--DKAAS 589
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 146/299 (48%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
+R + T N +++ LC GR A+RL+ M + P+ + + LI +K G++ +
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
K+ + M+ PD+ T + +I G C L A + E M C P+ +TYNT+I+G
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
E + +++ ++G +TY LI+ + + A ++ + M +G PDI
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 465
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
ITY+ L+ K G E+ +V L M+P+ TYN +I + G + D+
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 525
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEG 412
++ P + Y M++G C+ GL + A +L+ M + P+ TYNTL+ ++G
Sbjct: 526 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDG 584
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 130/298 (43%), Gaps = 10/298 (3%)
Query: 277 ALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQP-----NAVTY 331
A+++ +M P I+ +N L+S AK ++ LVIS L MQ + +Y
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFD---LVIS--LGERMQNLRISYDLYSY 118
Query: 332 NTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVS 391
N LI+ VL M + P VT + +LNG C + A++L M
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178
Query: 392 ESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMES 451
P+ VT+NTL+ GL E + L+ + C P L TY ++GL + G ++
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 452 AKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVIL 511
A L +M I D + ++++ C + +A+ L EM K + Y +I
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 512 GLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKI 569
LC + A + L M+ + P+ + ALI A G + EA L+ +I+ I
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 89/191 (46%)
Query: 379 LDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNI 438
LD A+ L+ MV P IV +N LLS + K D I L + S L +YNI
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 439 AIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKD 498
I+ R + A + +M+ G PD +T SSL G+C ++ EA+ L+ +M +
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 499 EKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEAN 558
+ + +I GL K A+ +D MV C+PD Y ++ + G + A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 559 DLHQRLIEWKI 569
L +++ + KI
Sbjct: 241 SLLKKMEKGKI 251
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 129/453 (28%), Positives = 231/453 (50%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
V ++ +T N ++ LC R +L A ++ M + P + +L+ G +I +
Sbjct: 96 VSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 155
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
+++ MV G PD +T ++ GL + AV LVE M + GC PD +TY +I G+
Sbjct: 156 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 215
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
+G + A++ + ++ Y+ +I+ +C+Y AL + +M +G PD+
Sbjct: 216 CKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDV 275
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
TY+SL+S G + + ++S++L R + PN VT+N+LI + + G + + +
Sbjct: 276 FTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDE 335
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
M + S P VTYN ++NG C LD A +++ MVS+ C PD+VTYNTL++G CK
Sbjct: 336 MIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKK 395
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSS 473
V +G++L ++ VTY I G + ++A+ ++ +M+ G+ P+ +T+++
Sbjct: 396 VVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNT 455
Query: 474 LAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSR 533
L G C +LE+AM + + + K + Y + G+CK KV+ +
Sbjct: 456 LLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKG 515
Query: 534 CKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
KPD Y+ +I G+ +EA L ++ E
Sbjct: 516 VKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKE 548
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/479 (25%), Positives = 227/479 (47%), Gaps = 36/479 (7%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
DG+ K+ +N +L A L M + P + L+ + K+ + D
Sbjct: 30 DGY-REKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFG 88
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
M + G ++ T N++I LC+R L A+ ++ M G P +T N+++ G
Sbjct: 89 EKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHG 148
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
+EAV+ + G P +T+T L+ + ++ A A+ ++E M ++GC PD++TY
Sbjct: 149 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 208
Query: 297 NSLVSFTAKQG----------------------VY-------------EETYLVISNLLS 321
++++ K+G +Y ++ + + + +
Sbjct: 209 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDN 268
Query: 322 RGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDR 381
+G++P+ TY++LI L ++G W +L M E P VT+N +++ K G L
Sbjct: 269 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIE 328
Query: 382 AISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAID 441
A L+ M+ S P+IVTYN+L++G C +DE Q+ L+ +C P +VTYN I+
Sbjct: 329 AEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIN 388
Query: 442 GLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKI 501
G + + EL+ +M +G+V + +T+++L GF + A + K+M
Sbjct: 389 GFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHP 448
Query: 502 KHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDL 560
Y ++ GLCK K++ A+ + + +S+ +PD Y+ + + + +G V++ DL
Sbjct: 449 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDL 507
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 169/367 (46%), Gaps = 9/367 (2%)
Query: 124 ILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSG 183
++ +LC + A L M K P + ++LI L G+ ++++ M+
Sbjct: 246 VIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK 305
Query: 184 GVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAV 243
P+V+T N +I K G L A L ++M P+ +TYN++I G +EA
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQ 365
Query: 244 SFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFT 303
+ + K C P ++TY LI C+ + +E+ DM+ G + +TY +L+
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425
Query: 304 AKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTR 363
+ + +V ++S G+ PN +TYNTL+ L +G + V E + ++ P
Sbjct: 426 FQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDI 485
Query: 364 VTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYL 423
TYNIM G+CK+G ++ L+ ++ + PD++ YNT++SG CK+G +E L
Sbjct: 486 YTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIK 545
Query: 424 LTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIG---------KGIVPDEITHSSL 474
+ P TYN I R G ++ EL EM G+V D + L
Sbjct: 546 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRL 605
Query: 475 AWGFCGV 481
GF V
Sbjct: 606 DKGFLEV 612
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 168/370 (45%), Gaps = 13/370 (3%)
Query: 74 SAVIDRVNEVDHEDWGLESFERRESGELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGR 133
S VID + + H D L F ++ K ++P D FT + ++ LC GR
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEMDN-------KGIRP------DVFTYSSLISCLCNYGR 290
Query: 134 LMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNM 193
A+RL+ M + P+ + +LI K G++ + K+ + M+ P+++T N
Sbjct: 291 WSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNS 350
Query: 194 VIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKG 253
+I G C L A + M C PD +TYNT+I G + + ++D R+G
Sbjct: 351 LINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRG 410
Query: 254 CPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETY 313
+TYT LI + A V + M +G +P+I+TYN+L+ K G E+
Sbjct: 411 LVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 470
Query: 314 LVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGL 373
+V L M+P+ TYN + + G + D+ ++ P + YN M++G
Sbjct: 471 VVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGF 530
Query: 374 CKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGL 433
CK GL + A +L+ M + PD TYNTL+ ++G +L+ + +
Sbjct: 531 CKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDA 590
Query: 434 VTYNIAIDGL 443
TY + D L
Sbjct: 591 STYGLVTDML 600
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 137/296 (46%), Gaps = 6/296 (2%)
Query: 277 ALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVIS---NLLSRGMQPNAVTYNT 333
A+++ +M +P I+ ++ L+S AK ++ LVIS + G+ N TYN
Sbjct: 49 AVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFD---LVISFGEKMEILGVSHNLYTYNI 105
Query: 334 LIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSES 393
+I+ L +L M + P+ VT N +LNG C + A++L MV
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 394 CFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAK 453
PD VT+ TL+ GL + E + L+ + C P LVTY I+GL + G + A
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 454 ELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGL 513
L ++M I D + +S++ C +++A+ L EM K + Y +I L
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 514 CKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKI 569
C + A + L M+ + P+ +++LI A A G + EA L +I+ I
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 123/448 (27%), Positives = 223/448 (49%)
Query: 119 FTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINI 178
+T + ++ C R +L A ++ M + P + +L+ G +I ++
Sbjct: 117 YTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN 238
MV G PD T N +I GL + AV LV+ M + GC PD +TY ++ G+ +G+
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 239 FNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNS 298
+ A+S K + P ++ Y +I+ +C Y AL + +M +G P+++TYNS
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 296
Query: 299 LVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETS 358
L+ G + + ++S+++ R + PN VT++ LI + G + + + M + S
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 356
Query: 359 SPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGI 418
P TY+ ++NG C LD A ++ M+S+ CFP++VTYNTL+ G CK VDEG+
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM 416
Query: 419 QLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGF 478
+L ++ VTY I G + ++A+ ++ +M+ G++PD +T+S L G
Sbjct: 417 ELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGL 476
Query: 479 CGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDE 538
C ++E A+ + + + + + Y +I G+CK KV+ + KP+
Sbjct: 477 CNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 536
Query: 539 KIYDALIKAVADSGMVKEANDLHQRLIE 566
Y ++ G+ +EA+ L + + E
Sbjct: 537 VTYTTMMSGFCRKGLKEEADALFREMKE 564
Score = 202 bits (513), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 197/416 (47%), Gaps = 35/416 (8%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T N +L C R+ A L+ M P + LI GL + + + ++
Sbjct: 150 DIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALV 209
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
+ MV+ G PD++T +V+ GLCKRG + A+ L++ M P + YNTII + +
Sbjct: 210 DRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNY 269
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
N N+A++ + + KG P ++TY LI +C Y A +L DM P+++T+
Sbjct: 270 KNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF 329
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
++L+ K+G E + ++ R + P+ TY++LI+ H D + E+M
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 389
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISL------------------------------- 385
P VTYN ++ G CK+ +D + L
Sbjct: 390 KDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDN 449
Query: 386 ----YSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAID 441
+ MVS+ PDI+TY+ LL GLC G V+ + + L + P + TYNI I+
Sbjct: 450 AQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIE 509
Query: 442 GLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKK 497
G+ + G +E +L+ + KG+ P+ +T++++ GFC EEA L +EM ++
Sbjct: 510 GMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE 565
Score = 192 bits (487), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 126/473 (26%), Positives = 220/473 (46%), Gaps = 35/473 (7%)
Query: 123 KILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMS 182
KI N +L A L M + P + L+ + K+ + D + M
Sbjct: 51 KISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL 110
Query: 183 GGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEA 242
G ++ T +++I C+R L A+ ++ M G PD +T N+++ G ++A
Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 170
Query: 243 VSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSF 302
VS + G P T+ LI + R+ A A+ +++ M ++GC PD++TY +V+
Sbjct: 171 VSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNG 230
Query: 303 TAKQGVYE--------------ETYLVISNLL---------------------SRGMQPN 327
K+G + E +VI N + ++G++PN
Sbjct: 231 LCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPN 290
Query: 328 AVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYS 387
VTYN+LI L ++G W +L M E P VT++ +++ K G L A LY
Sbjct: 291 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 350
Query: 388 TMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMG 447
M+ S PDI TY++L++G C +DE + L+ +C P +VTYN I G +
Sbjct: 351 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 410
Query: 448 SMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYR 507
++ EL+ EM +G+V + +T+++L GF + + A + K+M Y
Sbjct: 411 RVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYS 470
Query: 508 CVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDL 560
++ GLC KV+ A+ + + RS+ +PD Y+ +I+ + +G V++ DL
Sbjct: 471 ILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 523
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 168/361 (46%)
Query: 204 LKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTV 263
L AV+L DM S P + ++ ++ + F+ +S + G L TY++
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 264 LIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRG 323
LI CR AL VL M G PDI+T NSL++ + ++ ++ G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 324 MQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAI 383
QP++ T+NTLIH L H +++ M P VTY I++NGLCK G +D A+
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 384 SLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGL 443
SL M P +V YNT++ LC V++ + L + P +VTYN I L
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 444 ARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKH 503
G A L S+MI + I P+ +T S+L F +L EA +L EM K+
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 504 TAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQR 563
Y +I G C ++D A +LM+ C P+ Y+ LIK + V E +L +
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421
Query: 564 L 564
+
Sbjct: 422 M 422
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 176/384 (45%), Gaps = 13/384 (3%)
Query: 87 DWGLESFERRESGELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMAR 146
D L ++ E G+ ++PG + N I+ LC + A L M
Sbjct: 238 DLALSLLKKMEQGK-IEPGVVIY------------NTIIDALCNYKNVNDALNLFTEMDN 284
Query: 147 KSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKS 206
K P+ + +LIR L G+ ++++ M+ P+V+T + +I K G L
Sbjct: 285 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 344
Query: 207 AVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIE 266
A L ++M PD TY+++I G +EA ++ + K C P ++TY LI+
Sbjct: 345 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 404
Query: 267 LVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQP 326
C+ +E+ +M+ G + +TY +L+ + + +V ++S G+ P
Sbjct: 405 GFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLP 464
Query: 327 NAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLY 386
+ +TY+ L+ L ++G + V E + + P TYNIM+ G+CK+G ++ L+
Sbjct: 465 DIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 387 STMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARM 446
++ + P++VTY T++SG C++G +E L + P TYN I R
Sbjct: 525 CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRD 584
Query: 447 GSMESAKELYSEMIGKGIVPDEIT 470
G ++ EL EM V D T
Sbjct: 585 GDKAASAELIREMRSCRFVGDAST 608
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 158/334 (47%), Gaps = 6/334 (1%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
+R + T N +++ LC GR A+RL+ M + P+ + + LI +K G++ +
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 346
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
K+ + M+ PD+ T + +I G C L A + E M C P+ +TYNT+I+G
Sbjct: 347 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 406
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
+E + +++ ++G +TYT LI + A V + M +G PDI
Sbjct: 407 CKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDI 466
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
+TY+ L+ G E +V L M+P+ TYN +I + G + D+
Sbjct: 467 MTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 526
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
++ P VTY M++G C+ GL + A +L+ M E PD TYNTL+ ++G
Sbjct: 527 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGD 586
Query: 414 VDEGIQLLYLL-----TGTNCSPGLVTYNIAIDG 442
+L+ + G + GLVT N+ DG
Sbjct: 587 KAASAELIREMRSCRFVGDASTIGLVT-NMLHDG 619
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 131/293 (44%)
Query: 277 ALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIH 336
A+ + DM +P I+ ++ L+S AK ++ + + + G+ N TY+ LI+
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124
Query: 337 SLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFP 396
VL M + P VT N +LNG C + A+SL MV P
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184
Query: 397 DIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELY 456
D T+NTL+ GL + E + L+ + C P LVTY I ++GL + G ++ A L
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 457 SEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQ 516
+M I P + ++++ C + +A+ L EM K + Y +I LC
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304
Query: 517 RKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKI 569
+ A + L M+ + P+ + ALI A G + EA L+ +I+ I
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%)
Query: 379 LDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNI 438
LD A++L+ MV FP IV ++ LLS + K D I L + S L TY+I
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 439 AIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKD 498
I+ R + A + ++M+ G PD +T +SL GFC +++ +A+ L+ +M +
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 499 EKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEAN 558
+ + +I GL + + A+ +D MV C+PD Y ++ + G + A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 559 DLHQRLIEWKI 569
L +++ + KI
Sbjct: 242 SLLKKMEQGKI 252
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 218 bits (556), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 123/453 (27%), Positives = 229/453 (50%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
+ ++ +T N ++ C R ++ A L+ M + P + ++L+ G +I
Sbjct: 116 ISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 175
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
+++ MV G PD IT +I GL AV LV+ M GC P+ +TY ++ G+
Sbjct: 176 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 235
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
+G+ + A + ++ Y+ +I+ +C+Y AL + +M +G P++
Sbjct: 236 CKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNV 295
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
ITY+SL+S + + ++S+++ R + PN VT+N LI + G + + +
Sbjct: 296 ITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDE 355
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
M + S P TY+ ++NG C LD A ++ M+S+ CFP++VTYNTL++G CK
Sbjct: 356 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKR 415
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSS 473
+DEG++L ++ VTY I G + ++A+ ++ +M+ G+ P+ +T+++
Sbjct: 416 IDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNT 475
Query: 474 LAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSR 533
L G C +LE+AM + + + + + Y +I G+CK KV+ +
Sbjct: 476 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 535
Query: 534 CKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
KPD IY+ +I G+ +EA+ L +++ E
Sbjct: 536 VKPDVIIYNTMISGFCRKGLKEEADALFRKMRE 568
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/473 (24%), Positives = 219/473 (46%), Gaps = 35/473 (7%)
Query: 123 KILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMS 182
+IL+N +L A L M + +P L+ + K+ + D + M
Sbjct: 55 EILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL 114
Query: 183 GGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEA 242
G ++ T N++I C+R + A+ L+ M G P +T ++++ G ++A
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 243 VSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSF 302
V+ + G P IT+T LI + + A A+ +++ M GC P+++TY +V+
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 303 TAKQG----------------------VY-------------EETYLVISNLLSRGMQPN 327
K+G +Y ++ + + + ++G++PN
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 294
Query: 328 AVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYS 387
+TY++LI L ++ W +L M E P VT+N +++ K G L A LY
Sbjct: 295 VITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYD 354
Query: 388 TMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMG 447
M+ S PDI TY++L++G C +DE + L+ +C P +VTYN I+G +
Sbjct: 355 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAK 414
Query: 448 SMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYR 507
++ EL+ EM +G+V + +T+++L GF + A + K+M Y
Sbjct: 415 RIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYN 474
Query: 508 CVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDL 560
++ GLCK K++ A+ + + RS+ +P Y+ +I+ + +G V++ DL
Sbjct: 475 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 162/347 (46%)
Query: 124 ILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSG 183
++ LC RG + A L+ M + + +I L K D + M G
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290
Query: 184 GVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAV 243
P+VIT + +I LC A L+ DM +P+ +T+N +I +G EA
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAE 350
Query: 244 SFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFT 303
+ + +++ P + TY+ LI C + A + E M + C+P+++TYN+L++
Sbjct: 351 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGF 410
Query: 304 AKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTR 363
K +E + + RG+ N VTY TLIH D V + M P
Sbjct: 411 CKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNI 470
Query: 364 VTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYL 423
+TYN +L+GLCK+G L++A+ ++ + P I TYN ++ G+CK G V++G L
Sbjct: 471 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCS 530
Query: 424 LTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEIT 470
L+ P ++ YN I G R G E A L+ +M G +PD T
Sbjct: 531 LSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 149/324 (45%), Gaps = 13/324 (4%)
Query: 74 SAVIDRVNEVDHEDWGLESFERRESGELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGR 133
S VID + + HED L F E+ K V+P + T + ++ LC R
Sbjct: 264 STVIDSLCKYRHEDDALNLFTEMEN-------KGVRP------NVITYSSLISCLCNYER 310
Query: 134 LMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNM 193
A+RL+ M + P+ + LI +K G++ + K+ + M+ PD+ T +
Sbjct: 311 WSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 370
Query: 194 VIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKG 253
+I G C L A + E M C P+ +TYNT+I G +E V +++ ++G
Sbjct: 371 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRG 430
Query: 254 CPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETY 313
+TYT LI + A V + M +G +P+I+TYN+L+ K G E+
Sbjct: 431 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 490
Query: 314 LVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGL 373
+V L M+P TYN +I + G + D+ ++ P + YN M++G
Sbjct: 491 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGF 550
Query: 374 CKSGLLDRAISLYSTMVSESCFPD 397
C+ GL + A +L+ M + PD
Sbjct: 551 CRKGLKEEADALFRKMREDGPLPD 574
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 125/279 (44%)
Query: 291 PDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDV 350
P I +N L+S AK ++ + + G+ N TYN LI+ +
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 351 LEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCK 410
L M + P+ VT + +LNG C + A++L MV PD +T+ TL+ GL
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 411 EGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEIT 470
E + L+ + C P LVTY + ++GL + G ++ A L ++M I + +
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 471 HSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMV 530
+S++ C ++A+ L EM K + Y +I LC + A + L M+
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 531 RSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKI 569
+ P+ ++ALI A G + EA L+ +I+ I
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 104/214 (48%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D FT + ++ C RL A + E+M K P+ + LI G K +ID+G ++
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF 423
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
M G V + +T +I G + +A + + M G P+ +TYNT++ G+
Sbjct: 424 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 483
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
G +A+ ++ R P + TY ++IE +C+ ++ ++++G PD+I Y
Sbjct: 484 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIY 543
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVT 330
N+++S ++G+ EE + + G P++ T
Sbjct: 544 NTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 1/208 (0%)
Query: 368 IMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGT 427
I+ NGL S LD AI L+ MV P I +N LLS + K D I L +
Sbjct: 56 ILRNGL-HSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL 114
Query: 428 NCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEA 487
S L TYNI I+ R + A L +M+ G P +T SSL G+C ++ +A
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 488 MELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKA 547
+ L+ +M + + + +I GL K A+ +D MV+ C+P+ Y ++
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 548 VADSGMVKEANDLHQRLIEWKILKTEII 575
+ G + A +L ++ KI +I
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVI 262
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 228/453 (50%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
+ +D +T ++ C + +L+ A ++ + P + + L+ G G++ +
Sbjct: 101 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 160
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
+++ MV PD++T + +I GLC +G + A+ L++ M G PD +TY ++ +
Sbjct: 161 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 220
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
GN A+ ++ + ++ Y+++I+ +C+ AL + +M M+G D+
Sbjct: 221 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 280
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
+TY+SL+ G +++ ++ ++ R + P+ VT++ LI G ++
Sbjct: 281 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 340
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
M P +TYN +++G CK L A ++ MVS+ C PDIVTY+ L++ CK
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSS 473
VD+G++L ++ P +TYN + G + G + +AKEL+ EM+ +G+ P +T+
Sbjct: 401 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 460
Query: 474 LAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSR 533
L G C +L +A+E+ ++M K + Y +I G+C KVD A +
Sbjct: 461 LLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG 520
Query: 534 CKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
KPD Y+ +I + G + EA+ L +++ E
Sbjct: 521 VKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 182/379 (48%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T +L LC G A L M ++ + +I L K G D +
Sbjct: 209 DEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLF 268
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
N M M G DV+T + +IGGLC G ++ +M PD +T++ +I +
Sbjct: 269 NEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKE 328
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
G EA + + + +G P ITY LI+ C+ A ++ + M +GC PDI+TY
Sbjct: 329 GKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTY 388
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
+ L++ K ++ + + S+G+ PN +TYNTL+ G + ++ + M
Sbjct: 389 SILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS 448
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDE 416
PP+ VTY I+L+GLC +G L++A+ ++ M I YN ++ G+C VD+
Sbjct: 449 RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDD 508
Query: 417 GIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAW 476
L L+ P +VTYN+ I GL + GS+ A L+ +M G PD+ T++ L
Sbjct: 509 AWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIR 568
Query: 477 GFCGVDQLEEAMELLKEMH 495
G L ++EL++EM
Sbjct: 569 AHLGGSGLISSVELIEEMK 587
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 209/437 (47%), Gaps = 9/437 (2%)
Query: 137 AARLIEIMARKSQIPHFPSCTN--------LIRGLIKIGQIDKGCKIINIMVMSGGVPDV 188
A+ +I+ + + + H+ S T L G++ I +++ + M+ S +P
Sbjct: 12 ASNFTQILEKGTSLLHYSSITEAKLSYKERLRNGIVDI-KVNDAIDLFESMIQSRPLPTP 70
Query: 189 ITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKD 248
I N + + + + + M L+G D T +I K A S
Sbjct: 71 IDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGR 130
Query: 249 QLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGV 308
+ G P IT++ L+ C A+ +++ M PD++T ++L++ +G
Sbjct: 131 AWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGR 190
Query: 309 YEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNI 368
E ++I ++ G QP+ VTY +++ L G D+ M E + + V Y+I
Sbjct: 191 VSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI 250
Query: 369 MLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTN 428
+++ LCK G D A+SL++ M + D+VTY++L+ GLC +G D+G ++L + G N
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310
Query: 429 CSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAM 488
P +VT++ ID + G + AKELY+EMI +GI PD IT++SL GFC + L EA
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 370
Query: 489 ELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAV 548
++ M K + Y +I CK ++VD ++ + P+ Y+ L+
Sbjct: 371 QMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGF 430
Query: 549 ADSGMVKEANDLHQRLI 565
SG + A +L Q ++
Sbjct: 431 CQSGKLNAAKELFQEMV 447
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 173/347 (49%)
Query: 124 ILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSG 183
++ +LC G A L M K + ++LI GL G+ D G K++ M+
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310
Query: 184 GVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAV 243
+PDV+T + +I K G L A +L +M G +PD ITYN++I G + +EA
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 370
Query: 244 SFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFT 303
+ + KGC P ++TY++LI C+ + + +++ +G P+ ITYN+LV
Sbjct: 371 QMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGF 430
Query: 304 AKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTR 363
+ G + ++SRG+ P+ VTY L+ L +G + ++ E M ++
Sbjct: 431 CQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGI 490
Query: 364 VTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYL 423
YNI+++G+C + +D A SL+ ++ + PD+VTYN ++ GLCK+G + E L
Sbjct: 491 GIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRK 550
Query: 424 LTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEIT 470
+ C+P TYNI I + S+ EL EM G D T
Sbjct: 551 MKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSST 597
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/459 (25%), Positives = 203/459 (44%), Gaps = 41/459 (8%)
Query: 137 AARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIG 196
A L E M + +P L + + Q D M ++G D+ T ++I
Sbjct: 54 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMIN 113
Query: 197 GLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPP 256
C++ L A ++ G PD IT++T++ G +G +EAV+ + P
Sbjct: 114 CYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP 173
Query: 257 YLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVI 316
L+T + LI +C AL +++ M G PD +TY +++ K G +
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233
Query: 317 SNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTR---VTYNIMLNGL 373
+ R ++ + V Y+ +I SL G +D D L + NE + VTY+ ++ GL
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFD---DALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 374 C-----------------------------------KSGLLDRAISLYSTMVSESCFPDI 398
C K G L A LY+ M++ PD
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350
Query: 399 VTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSE 458
+TYN+L+ G CKE + E Q+ L+ C P +VTY+I I+ + ++ L+ E
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 459 MIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRK 518
+ KG++P+ IT+++L GFC +L A EL +EM + Y ++ GLC +
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 470
Query: 519 VDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
++ A++ + M +SR IY+ +I + ++ V +A
Sbjct: 471 LNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDA 509
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 106/245 (43%)
Query: 326 PNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISL 385
P + +N L +++ +D V + M T IM+N C+ L A S+
Sbjct: 68 PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSV 127
Query: 386 YSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLAR 445
PD +T++TL++G C EG V E + L+ + P LVT + I+GL
Sbjct: 128 LGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCL 187
Query: 446 MGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTA 505
G + A L M+ G PDE+T+ + C A++L ++M +++ K
Sbjct: 188 KGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ 247
Query: 506 YRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLI 565
Y VI LCK D A+ + M K D Y +LI + + G + + + +I
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 566 EWKIL 570
I+
Sbjct: 308 GRNII 312
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/416 (28%), Positives = 214/416 (51%)
Query: 151 PHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDL 210
P+ + + LI GL G++ + ++++ MV G PD+IT N ++ GLC G A+ L
Sbjct: 156 PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLL 215
Query: 211 VEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCR 270
++ M GC P+A+TY ++ M G A+ + + + Y+++I+ +C+
Sbjct: 216 IDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 271 YCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVT 330
+ A + +M M+G +IITYN L+ G +++ ++ +++ R + PN VT
Sbjct: 276 HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 335
Query: 331 YNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMV 390
++ LI S G +++ + M P +TY +++G CK LD+A + MV
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 391 SESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSME 450
S+ C P+I T+N L++G CK +D+G++L ++ VTYN I G +G +
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455
Query: 451 SAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVI 510
AKEL+ EM+ + + P+ +T+ L G C + E+A+E+ +++ K ++ Y +I
Sbjct: 456 VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIII 515
Query: 511 LGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
G+C KVD A + KP K Y+ +I + G + EA L +++ E
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEE 571
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 120/408 (29%), Positives = 201/408 (49%), Gaps = 1/408 (0%)
Query: 162 GLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSP 221
GL+ I + D + M+ S +P VI + + + K + L + M L G +
Sbjct: 63 GLVDI-KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAH 121
Query: 222 DAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVL 281
+ T + +I A S ++ G P IT++ LI +C ALE++
Sbjct: 122 NLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELV 181
Query: 282 EDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSH 341
+ M G PD+IT N+LV+ G E L+I ++ G QPNAVTY +++ +
Sbjct: 182 DRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKS 241
Query: 342 GYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTY 401
G ++L M E + V Y+I+++GLCK G LD A +L++ M + +I+TY
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITY 301
Query: 402 NTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIG 461
N L+ G C G D+G +LL + +P +VT+++ ID + G + A+EL+ EMI
Sbjct: 302 NILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIH 361
Query: 462 KGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDI 521
+GI PD IT++SL GFC + L++A +++ M K + +I G CK ++D
Sbjct: 362 RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDD 421
Query: 522 AIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKI 569
++ M D Y+ LI+ + G + A +L Q ++ K+
Sbjct: 422 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV 469
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/445 (26%), Positives = 206/445 (46%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T + ++ LC GR+ A L++ M P + L+ GL G+ + +I+ M
Sbjct: 160 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM 219
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
V G P+ +T V+ +CK G A++L+ M DA+ Y+ II G+ G+
Sbjct: 220 VEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSL 279
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
+ A + + + KG +ITY +LI C ++L DM P+++T++ L
Sbjct: 280 DNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL 339
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS 359
+ K+G E + ++ RG+ P+ +TY +LI + D + ++++M
Sbjct: 340 IDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC 399
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQ 419
P T+NI++NG CK+ +D + L+ M D VTYNTL+ G C+ G ++ +
Sbjct: 400 DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKE 459
Query: 420 LLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFC 479
L + P +VTY I +DGL G E A E++ ++ + D ++ + G C
Sbjct: 460 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMC 519
Query: 480 GVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEK 539
++++A +L + K K Y +I GLCK+ + A M PD
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGW 579
Query: 540 IYDALIKAVADSGMVKEANDLHQRL 564
Y+ LI+A G ++ L + L
Sbjct: 580 TYNILIRAHLGDGDATKSVKLIEEL 604
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 190/394 (48%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
+ T +L +C G+ A L+ M ++ + +I GL K G +D +
Sbjct: 227 NAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLF 286
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
N M M G ++IT N++IGG C G L+ DM +P+ +T++ +I +
Sbjct: 287 NEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKE 346
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
G EA K+ + +G P ITYT LI+ C+ +A ++++ M +GC P+I T+
Sbjct: 347 GKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTF 406
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
N L++ K ++ + + RG+ + VTYNTLI G + ++ + M
Sbjct: 407 NILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVS 466
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDE 416
PP VTY I+L+GLC +G ++A+ ++ + DI YN ++ G+C VD+
Sbjct: 467 RKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 526
Query: 417 GIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAW 476
L L PG+ TYNI I GL + G + A+ L+ +M G PD T++ L
Sbjct: 527 AWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIR 586
Query: 477 GFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVI 510
G ++++L++E+ + + + + VI
Sbjct: 587 AHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 620
Score = 171 bits (434), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 118/479 (24%), Positives = 212/479 (44%), Gaps = 44/479 (9%)
Query: 126 QNLCTRGRLMA---------AARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
+NL R RL + A L M +P + L + K Q D +
Sbjct: 52 RNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALC 111
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
M + G ++ T +++I C+ L A + + G P+ IT++T+I G+ +
Sbjct: 112 KQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLE 171
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
G +EA+ + G P LIT L+ +C A+ +++ M GC P+ +TY
Sbjct: 172 GRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTY 231
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
+++ K G ++ + R ++ +AV Y+ +I L HG D ++ M
Sbjct: 232 GPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEM 291
Query: 357 TSSPPTRVTYNIMLNGLC-----------------------------------KSGLLDR 381
+TYNI++ G C K G L
Sbjct: 292 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 351
Query: 382 AISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAID 441
A L+ M+ PD +TY +L+ G CKE +D+ Q++ L+ C P + T+NI I+
Sbjct: 352 AEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 411
Query: 442 GLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKI 501
G + ++ EL+ +M +G+V D +T+++L GFC + +L A EL +EM +
Sbjct: 412 GYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPP 471
Query: 502 KHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDL 560
Y+ ++ GLC + + A++ + + +S+ + D IY+ +I + ++ V +A DL
Sbjct: 472 NIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 530
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 165/342 (48%), Gaps = 2/342 (0%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
++ D + I+ LC G L A L M K + + LI G G+ D G
Sbjct: 259 IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGA 318
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
K++ M+ P+V+T +++I K G L+ A +L ++M G +PD ITY ++I G
Sbjct: 319 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
+ + ++A + KGC P + T+ +LI C+ LE+ M++ G D
Sbjct: 379 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 438
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
+TYN+L+ + G + ++SR + PN VTY L+ L +G + ++ E
Sbjct: 439 VTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK 498
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
+ ++ YNI+++G+C + +D A L+ ++ + P + TYN ++ GLCK+G
Sbjct: 499 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGP 558
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKEL 455
+ E L + +P TYNI I A +G ++ K +
Sbjct: 559 LSEAELLFRKMEEDGHAPDGWTYNILIR--AHLGDGDATKSV 598
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 127/452 (28%), Positives = 216/452 (47%), Gaps = 4/452 (0%)
Query: 109 KPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQ 168
+P P + F NK+L + + L E M R + + LI + Q
Sbjct: 5 RPLPSI----FEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 169 IDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNT 228
I ++ M+ G P ++T + ++ G C + AV LV+ M G PD IT+ T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 229 IIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEG 288
+I G+F +EAV+ +++GC P L+TY V++ +C+ A +L M
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 289 CYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVD 348
D++ +N+++ K ++ + + ++G++PN VTY++LI L S+G W
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 349 DVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGL 408
+L M E P VT+N +++ K G A L+ M+ S PDI TYN+L++G
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 409 CKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDE 468
C +D+ Q+ + +C P L TYN I G + +E EL+ EM +G+V D
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Query: 469 ITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDL 528
+T+++L G + A ++ K+M Y ++ GLC K++ A++ D
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 420
Query: 529 MVRSRCKPDEKIYDALIKAVADSGMVKEANDL 560
M +S K D IY +I+ + +G V + DL
Sbjct: 421 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 452
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 206/428 (48%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T + +L C R+ A L++ M P + T LI GL + + +++ M
Sbjct: 82 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 141
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
V G P+++T +V+ GLCKRG + A +L+ M + D + +NTII + +
Sbjct: 142 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 201
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
++A++ +K+ KG P ++TY+ LI +C Y A ++L DM + P+++T+N+L
Sbjct: 202 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 261
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS 359
+ K+G + E + +++ R + P+ TYN+LI+ H D + E M
Sbjct: 262 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 321
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQ 419
P TYN ++ G CKS ++ L+ M D VTY TL+ GL +G D +
Sbjct: 322 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 381
Query: 420 LLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFC 479
+ + P ++TY+I +DGL G +E A E++ M I D ++++ G C
Sbjct: 382 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 441
Query: 480 GVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEK 539
++++ +L + K K Y +I GLC +R + A L M PD
Sbjct: 442 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSG 501
Query: 540 IYDALIKA 547
Y+ LI+A
Sbjct: 502 TYNTLIRA 509
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 187/382 (48%)
Query: 115 RNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCK 174
R D T ++ L + A L++ M ++ P+ + ++ GL K G ID
Sbjct: 112 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 171
Query: 175 IINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMF 234
++N M + DV+ N +I LCK ++ A++L ++M G P+ +TY+++I +
Sbjct: 172 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 231
Query: 235 DKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDII 294
G +++A D + K P L+T+ LI+ + + A ++ +DM PDI
Sbjct: 232 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIF 291
Query: 295 TYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIM 354
TYNSL++ ++ + ++S+ P+ TYNTLI + ++ M
Sbjct: 292 TYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM 351
Query: 355 NETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFV 414
+ VTY ++ GL G D A ++ MVS+ PDI+TY+ LL GLC G +
Sbjct: 352 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 411
Query: 415 DEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSL 474
++ +++ + + + Y I+G+ + G ++ +L+ + KG+ P+ +T++++
Sbjct: 412 EKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 471
Query: 475 AWGFCGVDQLEEAMELLKEMHK 496
G C L+EA LLK+M +
Sbjct: 472 ISGLCSKRLLQEAYALLKKMKE 493
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 183/387 (47%)
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN 238
MV S +P + N ++ + K + L E M G S + TYN +I +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 239 FNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNS 298
+ A++ ++ G P ++T + L+ C A+ +++ M G PD IT+ +
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 299 LVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETS 358
L+ E ++ ++ RG QPN VTY +++ L G D ++L M
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 359 SPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGI 418
V +N +++ LCK +D A++L+ M ++ P++VTY++L+S LC G +
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 419 QLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGF 478
QLL + +P LVT+N ID + G A++L+ +MI + I PD T++SL GF
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 479 CGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDE 538
C D+L++A ++ + M KD Y +I G CK ++V+ + M D
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Query: 539 KIYDALIKAVADSGMVKEANDLHQRLI 565
Y LI+ + G A + ++++
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMV 387
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 164/382 (42%), Gaps = 35/382 (9%)
Query: 124 ILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSG 183
++ LC RG + A L+ M +I L K +D + M G
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215
Query: 184 GVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAV 243
P+V+T + +I LC G A L+ DM +P+ +T+N +I +G F EA
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 275
Query: 244 SFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFT 303
D +++ P + TY LI C + +A ++ E M + C+PD+ TYN+L+
Sbjct: 276 KLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF 335
Query: 304 AKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTR 363
K E+ + + RG+ + VTY TLI L G D V + M PP
Sbjct: 336 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 395
Query: 364 VTYNIMLNGLCKSGLLDRA---------------ISLYSTMVSESCF------------- 395
+TY+I+L+GLC +G L++A I +Y+TM+ C
Sbjct: 396 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 455
Query: 396 -------PDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGS 448
P++VTYNT++SGLC + + E LL + P TYN I R G
Sbjct: 456 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGD 515
Query: 449 MESAKELYSEMIGKGIVPDEIT 470
++ EL EM V D T
Sbjct: 516 KAASAELIREMRSCRFVGDAST 537
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 152/339 (44%), Gaps = 13/339 (3%)
Query: 74 SAVIDRVNEVDHEDWGLESFERRESGELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGR 133
+ +ID + + H D L F+ E+ K ++P + T + ++ LC+ GR
Sbjct: 189 NTIIDSLCKYRHVDDALNLFKEMET-------KGIRP------NVVTYSSLISCLCSYGR 235
Query: 134 LMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNM 193
A++L+ M K P+ + LI +K G+ + K+ + M+ PD+ T N
Sbjct: 236 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNS 295
Query: 194 VIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKG 253
+I G C L A + E M C PD TYNT+I+G + +++ +G
Sbjct: 296 LINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 355
Query: 254 CPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETY 313
+TYT LI+ + A +V + M +G PDI+TY+ L+ G E+
Sbjct: 356 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 415
Query: 314 LVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGL 373
V + ++ + Y T+I + G D D+ ++ P VTYN M++GL
Sbjct: 416 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 475
Query: 374 CKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEG 412
C LL A +L M + PD TYNTL+ ++G
Sbjct: 476 CSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 514
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 125/279 (44%)
Query: 291 PDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDV 350
P I +N L+S AK ++ + + G+ N TYN LI+ +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 351 LEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCK 410
L M + P+ VT + +LNG C + A++L MV PD +T+ TL+ GL
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 411 EGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEIT 470
E + L+ + C P LVTY + ++GL + G ++ A L ++M I D +
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 471 HSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMV 530
+++ C +++A+ L KEM K + Y +I LC + A Q L M+
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 531 RSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKI 569
+ P+ ++ALI A G EA LH +I+ I
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI 286
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 81/181 (44%)
Query: 389 MVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGS 448
MV P I +N LLS + K D I L + S L TYNI I+ R
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 449 MESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRC 508
+ A L +M+ G P +T SSL G+C ++ +A+ L+ +M + + +
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 509 VILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWK 568
+I GL K A+ +D MV+ C+P+ Y ++ + G + A +L ++ K
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 569 I 569
I
Sbjct: 181 I 181
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 79/200 (39%), Gaps = 35/200 (17%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T N +++ C R+ L M+ + + + T LI+GL G D K+ M
Sbjct: 327 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 386
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAV------------------------------- 208
V G PD++T ++++ GLC G L+ A+
Sbjct: 387 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 446
Query: 209 ----DLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVL 264
DL +SL G P+ +TYNT+I G+ K EA + K G P TY L
Sbjct: 447 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTL 506
Query: 265 IELVCRYCGAIRALEVLEDM 284
I R + E++ +M
Sbjct: 507 IRAHLRDGDKAASAELIREM 526
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 211 bits (538), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 129/454 (28%), Positives = 227/454 (50%), Gaps = 1/454 (0%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
++ D T N +++ LC +L A ++E M +P + T +++G I+ G +D
Sbjct: 185 IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGAL 244
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMS-LSGCSPDAITYNTIIRG 232
+I MV G ++ N+++ G CK G ++ A++ +++MS G PD T+NT++ G
Sbjct: 245 RIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNG 304
Query: 233 MFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPD 292
+ G+ A+ L++G P + TY +I +C+ A+EVL+ M C P+
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPN 364
Query: 293 IITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLE 352
+TYN+L+S K+ EE + L S+G+ P+ T+N+LI L ++ E
Sbjct: 365 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFE 424
Query: 353 IMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEG 412
M P TYN++++ LC G LD A+++ M C ++TYNTL+ G CK
Sbjct: 425 EMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKAN 484
Query: 413 FVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHS 472
E ++ + S VTYN IDGL + +E A +L +MI +G PD+ T++
Sbjct: 485 KTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYN 544
Query: 473 SLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRS 532
SL FC +++A ++++ M + Y +I GLCK +V++A + L +
Sbjct: 545 SLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK 604
Query: 533 RCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
Y+ +I+ + EA +L + ++E
Sbjct: 605 GINLTPHAYNPVIQGLFRKRKTTEAINLFREMLE 638
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 128/415 (30%), Positives = 205/415 (49%), Gaps = 11/415 (2%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFP---SCTNLIRGLIKIGQIDKGCKIINI 178
N I+ C GR+ A I+ M+ +Q FP + L+ GL K G + +I+++
Sbjct: 263 NVIVHGFCKEGRVEDALNFIQEMS--NQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN 238
M+ G PDV T N VI GLCK G +K AV++++ M CSP+ +TYNT+I + +
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 239 FNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNS 298
EA + KG P + T+ LI+ +C A+E+ E+M +GC PD TYN
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 299 LVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETS 358
L+ +G +E ++ + G + +TYNTLI +++ + M
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500
Query: 359 SPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGI 418
VTYN +++GLCKS ++ A L M+ E PD TYN+LL+ C+ G + +
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAA 560
Query: 419 QLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGF 478
++ +T C P +VTY I GL + G +E A +L + KGI ++ + G
Sbjct: 561 DIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGL 620
Query: 479 CGVDQLEEAMELLKEMHKKDEKIKHT-AYRCVILGLCK-----QRKVDIAIQALD 527
+ EA+ L +EM +++E +YR V GLC + VD ++ L+
Sbjct: 621 FRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLE 675
Score = 201 bits (512), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 127/452 (28%), Positives = 223/452 (49%), Gaps = 9/452 (1%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQI----PHFPSCTNLIRGLIKIGQI 169
++ D N++L NL G + +L+EI K + P + LI+ L + Q+
Sbjct: 150 LKPDTHFYNRML-NLLVDGN---SLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQL 205
Query: 170 DKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTI 229
++ M G VPD T V+ G + G L A+ + E M GCS ++ N I
Sbjct: 206 RPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVI 265
Query: 230 IRGMFDKGNFNEAVSFWKDQLRK-GCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEG 288
+ G +G +A++F ++ + G P T+ L+ +C+ A+E+++ M EG
Sbjct: 266 VHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEG 325
Query: 289 CYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVD 348
PD+ TYNS++S K G +E V+ +++R PN VTYNTLI +L +
Sbjct: 326 YDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEAT 385
Query: 349 DVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGL 408
++ ++ P T+N ++ GLC + A+ L+ M S+ C PD TYN L+ L
Sbjct: 386 ELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSL 445
Query: 409 CKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDE 468
C +G +DE + +L + + C+ ++TYN IDG + A+E++ EM G+ +
Sbjct: 446 CSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNS 505
Query: 469 ITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDL 528
+T+++L G C ++E+A +L+ +M + +K Y ++ C+ + A +
Sbjct: 506 VTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQA 565
Query: 529 MVRSRCKPDEKIYDALIKAVADSGMVKEANDL 560
M + C+PD Y LI + +G V+ A+ L
Sbjct: 566 MTSNGCEPDIVTYGTLISGLCKAGRVEVASKL 597
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 196/387 (50%), Gaps = 1/387 (0%)
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN 238
M + G PDV T N++I LC+ L+ A+ ++EDM G PD T+ T+++G ++G+
Sbjct: 180 MSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGD 239
Query: 239 FNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMA-MEGCYPDIITYN 297
+ A+ + + GC ++ V++ C+ AL +++M+ +G +PD T+N
Sbjct: 240 LDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFN 299
Query: 298 SLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNET 357
+LV+ K G + ++ +L G P+ TYN++I L G +VL+ M
Sbjct: 300 TLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITR 359
Query: 358 SSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEG 417
P VTYN +++ LCK ++ A L + S+ PD+ T+N+L+ GLC
Sbjct: 360 DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVA 419
Query: 418 IQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWG 477
++L + C P TYN+ ID L G ++ A + +M G IT+++L G
Sbjct: 420 MELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDG 479
Query: 478 FCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPD 537
FC ++ EA E+ EM Y +I GLCK R+V+ A Q +D M+ KPD
Sbjct: 480 FCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPD 539
Query: 538 EKIYDALIKAVADSGMVKEANDLHQRL 564
+ Y++L+ G +K+A D+ Q +
Sbjct: 540 KYTYNSLLTHFCRGGDIKKAADIVQAM 566
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 196/385 (50%), Gaps = 6/385 (1%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D +T N ++ LC G + A ++++M ++ P + ++I GL K+G++ + +++
Sbjct: 294 DQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVL 353
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
+ M+ P+ +T N +I LCK ++ A +L ++ G PD T+N++I+G+
Sbjct: 354 DQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLT 413
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
N A+ +++ KGC P TY +LI+ +C AL +L+ M + GC +ITY
Sbjct: 414 RNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITY 473
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
N+L+ K E + + G+ N+VTYNTLI L + +++ M
Sbjct: 474 NTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIM 533
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDE 416
P + TYN +L C+ G + +A + M S C PDIVTY TL+SGLCK G V+
Sbjct: 534 EGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEV 593
Query: 417 GIQLL--YLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIV-PDEITHSS 473
+LL + G N +P YN I GL R A L+ EM+ + PD +++
Sbjct: 594 ASKLLRSIQMKGINLTPH--AYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRI 651
Query: 474 LAWGFC-GVDQLEEAMELLKEMHKK 497
+ G C G + EA++ L E+ +K
Sbjct: 652 VFRGLCNGGGPIREAVDFLVELLEK 676
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 173/417 (41%), Gaps = 72/417 (17%)
Query: 220 SPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALE 279
SP+ Y I+ + G+F++ +D C T+ +LIE ++ L
Sbjct: 80 SPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILS 139
Query: 280 VLE------------------------------------DMAMEGCYPDIITYNSLVSFT 303
V++ M++ G PD+ T+N L+
Sbjct: 140 VVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKAL 199
Query: 304 AKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDG----------------- 346
+ L++ ++ S G+ P+ T+ T++ G DG
Sbjct: 200 CRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSN 259
Query: 347 ---------------VDDVLEIMNETSSP----PTRVTYNIMLNGLCKSGLLDRAISLYS 387
V+D L + E S+ P + T+N ++NGLCK+G + AI +
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319
Query: 388 TMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMG 447
M+ E PD+ TYN+++SGLCK G V E +++L + +CSP VTYN I L +
Sbjct: 320 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKEN 379
Query: 448 SMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYR 507
+E A EL + KGI+PD T +SL G C AMEL +EM K + Y
Sbjct: 380 QVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYN 439
Query: 508 CVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
+I LC + K+D A+ L M S C Y+ LI + +EA ++ +
Sbjct: 440 MLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM 496
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 139/294 (47%), Gaps = 2/294 (0%)
Query: 279 EVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSR-GMQPNAVTYNTLIHS 337
++LEDM C T+ L+ A+ + +E V+ ++ G++P+ YN +++
Sbjct: 104 KILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNL 163
Query: 338 LSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPD 397
L V+ M+ P T+N+++ LC++ L AI + M S PD
Sbjct: 164 LVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPD 223
Query: 398 IVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYS 457
T+ T++ G +EG +D +++ + CS V+ N+ + G + G +E A
Sbjct: 224 EKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQ 283
Query: 458 EMIGK-GIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQ 516
EM + G PD+ T ++L G C ++ A+E++ M ++ Y VI GLCK
Sbjct: 284 EMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKL 343
Query: 517 RKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKIL 570
+V A++ LD M+ C P+ Y+ LI + V+EA +L + L IL
Sbjct: 344 GEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL 397
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 94/182 (51%), Gaps = 2/182 (1%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
V + T N ++ LC R+ AA+L++ M + Q P + +L+ + G I K
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAA 560
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
I+ M +G PD++T +I GLCK G ++ A L+ + + G + YN +I+G+
Sbjct: 561 DIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGL 620
Query: 234 FDKGNFNEAVSFWKDQLRKG-CPPYLITYTVLIELVCRYCGAIR-ALEVLEDMAMEGCYP 291
F K EA++ +++ L + PP ++Y ++ +C G IR A++ L ++ +G P
Sbjct: 621 FRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVP 680
Query: 292 DI 293
+
Sbjct: 681 EF 682
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/443 (28%), Positives = 212/443 (47%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N ++ +C GR+ A L+ +M K P S + ++ G + G++DK K+I +M
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
G P+ +IG LC+ L A + +M G PD + Y T+I G +G+
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 242 AVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVS 301
A F+ + + P ++TYT +I C+ + A ++ +M +G PD +T+ L++
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 302 FTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPP 361
K G ++ + V ++++ G PN VTY TLI L G D +++L M + P
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 362 TRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLL 421
TYN ++NGLCKSG ++ A+ L + D VTY TL+ CK G +D+ ++L
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 422 YLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGV 481
+ G P +VT+N+ ++G G +E ++L + M+ KGI P+ T +SL +C
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 482 DQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIY 541
+ L+ A + K+M + Y ++ G CK R + A M Y
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669
Query: 542 DALIKAVADSGMVKEANDLHQRL 564
LIK EA ++ ++
Sbjct: 670 SVLIKGFLKRKKFLEAREVFDQM 692
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 213/429 (49%), Gaps = 6/429 (1%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D + + ++ C G L +LIE+M RK P+ ++I L +I ++ + +
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
+ M+ G +PD + +I G CKRG +++A +M +PD +TY II G
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
G+ EA + + KG P +T+T LI C+ A V M GC P+++TY
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
+L+ K+G + ++ + G+QPN TYN++++ L G +++ ++++ E
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG---NIEEAVKLVGE 516
Query: 357 TSSP---PTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
+ VTY +++ CKSG +D+A + M+ + P IVT+N L++G C G
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSS 473
+++G +LL + +P T+N + ++++A +Y +M +G+ PD T+ +
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636
Query: 474 LAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSR 533
L G C ++EA L +EM K + + Y +I G K++K A + D M R
Sbjct: 637 LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696
Query: 534 CKPDEKIYD 542
D++I+D
Sbjct: 697 LAADKEIFD 705
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 176/394 (44%), Gaps = 9/394 (2%)
Query: 173 CKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSL-----SGCSPDAITYN 227
C +I++ V S D+ +I +R L V+ L D ++
Sbjct: 123 CIVIHLAVAS---KDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFD 179
Query: 228 TIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYC-GAIRALEVLEDMAM 286
+ + D G EA ++ L G + + V + + + C A+ V +
Sbjct: 180 VFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPE 239
Query: 287 EGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDG 346
G ++ +YN ++ F + G +E + ++ + +G P+ ++Y+T+++ G D
Sbjct: 240 VGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDK 299
Query: 347 VDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLS 406
V ++E+M P Y ++ LC+ L A +S M+ + PD V Y TL+
Sbjct: 300 VWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID 359
Query: 407 GLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVP 466
G CK G + + Y + + +P ++TY I G ++G M A +L+ EM KG+ P
Sbjct: 360 GFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP 419
Query: 467 DEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQAL 526
D +T + L G+C +++A + M + Y +I GLCK+ +D A + L
Sbjct: 420 DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 527 DLMVRSRCKPDEKIYDALIKAVADSGMVKEANDL 560
M + +P+ Y++++ + SG ++EA L
Sbjct: 480 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 150/306 (49%)
Query: 260 TYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNL 319
+Y ++I VC+ A +L M ++G PD+I+Y+++V+ + G ++ + +I +
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 320 LSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLL 379
+G++PN+ Y ++I L ++ M P V Y +++G CK G +
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 380 DRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIA 439
A + M S PD++TY ++SG C+ G + E +L + + P VT+
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 440 IDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDE 499
I+G + G M+ A +++ MI G P+ +T+++L G C L+ A ELL EM K
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 500 KIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEAND 559
+ Y ++ GLCK ++ A++ + + D Y L+ A SG + +A +
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 560 LHQRLI 565
+ + ++
Sbjct: 548 ILKEML 553
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 128/277 (46%), Gaps = 11/277 (3%)
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDD-VLE 352
+ + LV F G+ E V +L+ G+ + + N + LS Y V
Sbjct: 180 VFFQVLVDF----GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFR 235
Query: 353 IMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEG 412
E +YNI+++ +C+ G + A L M + PD+++Y+T+++G C+ G
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 295
Query: 413 FVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHS 472
+D+ +L+ ++ P Y I L R+ + A+E +SEMI +GI+PD + ++
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 355
Query: 473 SLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRS 532
+L GFC + A + EMH +D Y +I G C+ + ++A L
Sbjct: 356 TLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ---IGDMVEAGKLFHEM 412
Query: 533 RCK---PDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
CK PD + LI +G +K+A +H +I+
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 449
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/443 (28%), Positives = 212/443 (47%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N ++ +C GR+ A L+ +M K P S + ++ G + G++DK K+I +M
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
G P+ +IG LC+ L A + +M G PD + Y T+I G +G+
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 242 AVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVS 301
A F+ + + P ++TYT +I C+ + A ++ +M +G PD +T+ L++
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 302 FTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPP 361
K G ++ + V ++++ G PN VTY TLI L G D +++L M + P
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 362 TRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLL 421
TYN ++NGLCKSG ++ A+ L + D VTY TL+ CK G +D+ ++L
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 422 YLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGV 481
+ G P +VT+N+ ++G G +E ++L + M+ KGI P+ T +SL +C
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 482 DQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIY 541
+ L+ A + K+M + Y ++ G CK R + A M Y
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669
Query: 542 DALIKAVADSGMVKEANDLHQRL 564
LIK EA ++ ++
Sbjct: 670 SVLIKGFLKRKKFLEAREVFDQM 692
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 213/429 (49%), Gaps = 6/429 (1%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D + + ++ C G L +LIE+M RK P+ ++I L +I ++ + +
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
+ M+ G +PD + +I G CKRG +++A +M +PD +TY II G
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
G+ EA + + KG P +T+T LI C+ A V M GC P+++TY
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
+L+ K+G + ++ + G+QPN TYN++++ L G +++ ++++ E
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG---NIEEAVKLVGE 516
Query: 357 TSSP---PTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
+ VTY +++ CKSG +D+A + M+ + P IVT+N L++G C G
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSS 473
+++G +LL + +P T+N + ++++A +Y +M +G+ PD T+ +
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636
Query: 474 LAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSR 533
L G C ++EA L +EM K + + Y +I G K++K A + D M R
Sbjct: 637 LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696
Query: 534 CKPDEKIYD 542
D++I+D
Sbjct: 697 LAADKEIFD 705
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 176/394 (44%), Gaps = 9/394 (2%)
Query: 173 CKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSL-----SGCSPDAITYN 227
C +I++ V S D+ +I +R L V+ L D ++
Sbjct: 123 CIVIHLAVAS---KDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFD 179
Query: 228 TIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYC-GAIRALEVLEDMAM 286
+ + D G EA ++ L G + + V + + + C A+ V +
Sbjct: 180 VFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPE 239
Query: 287 EGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDG 346
G ++ +YN ++ F + G +E + ++ + +G P+ ++Y+T+++ G D
Sbjct: 240 VGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDK 299
Query: 347 VDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLS 406
V ++E+M P Y ++ LC+ L A +S M+ + PD V Y TL+
Sbjct: 300 VWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID 359
Query: 407 GLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVP 466
G CK G + + Y + + +P ++TY I G ++G M A +L+ EM KG+ P
Sbjct: 360 GFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP 419
Query: 467 DEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQAL 526
D +T + L G+C +++A + M + Y +I GLCK+ +D A + L
Sbjct: 420 DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 527 DLMVRSRCKPDEKIYDALIKAVADSGMVKEANDL 560
M + +P+ Y++++ + SG ++EA L
Sbjct: 480 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 150/306 (49%)
Query: 260 TYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNL 319
+Y ++I VC+ A +L M ++G PD+I+Y+++V+ + G ++ + +I +
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 320 LSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLL 379
+G++PN+ Y ++I L ++ M P V Y +++G CK G +
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 380 DRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIA 439
A + M S PD++TY ++SG C+ G + E +L + + P VT+
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 440 IDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDE 499
I+G + G M+ A +++ MI G P+ +T+++L G C L+ A ELL EM K
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 500 KIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEAND 559
+ Y ++ GLCK ++ A++ + + D Y L+ A SG + +A +
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 560 LHQRLI 565
+ + ++
Sbjct: 548 ILKEML 553
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 128/277 (46%), Gaps = 11/277 (3%)
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDD-VLE 352
+ + LV F G+ E V +L+ G+ + + N + LS Y V
Sbjct: 180 VFFQVLVDF----GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFR 235
Query: 353 IMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEG 412
E +YNI+++ +C+ G + A L M + PD+++Y+T+++G C+ G
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 295
Query: 413 FVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHS 472
+D+ +L+ ++ P Y I L R+ + A+E +SEMI +GI+PD + ++
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 355
Query: 473 SLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRS 532
+L GFC + A + EMH +D Y +I G C+ + ++A L
Sbjct: 356 TLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ---IGDMVEAGKLFHEM 412
Query: 533 RCK---PDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
CK PD + LI +G +K+A +H +I+
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 449
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 225/453 (49%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
+ +D +T + + C R +L A ++ M + P + ++L+ G +I
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
+++ MV G PD T +I GL AV LV+ M GC PD +TY T++ G+
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
+G+ + A+S K + ++ Y +I+ +C+Y AL + +M +G PD+
Sbjct: 234 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
TY+SL+S G + + ++S+++ R + PN VT++ LI + G + + +
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
M + S P TY+ ++NG C LD A ++ M+S+ CFP++VTY+TL+ G CK
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSS 473
V+EG++L ++ VTY I G + ++A+ ++ +M+ G+ P+ +T++
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473
Query: 474 LAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSR 533
L G C +L +AM + + + + + Y +I G+CK KV+ + +
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG 533
Query: 534 CKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
P+ Y+ +I G +EA+ L +++ E
Sbjct: 534 VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKE 566
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 210/446 (47%), Gaps = 38/446 (8%)
Query: 153 FPSCTNLIRGLIKIGQIDKGCKIINI---MVMSGGVPDVITCNMVIGGLCKRGYLKSAVD 209
FPS + L + +++K +I++ M G D+ T ++ I C+R L A+
Sbjct: 80 FPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALA 139
Query: 210 LVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVC 269
++ M G PD +T ++++ G ++AV+ + G P T+T LI +
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 270 RYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYE--------------ETYLV 315
+ A A+ +++ M GC PD++TY ++V+ K+G + E +V
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 259
Query: 316 ISNLL---------------------SRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIM 354
I N + ++G++P+ TY++LI L ++G W +L M
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 319
Query: 355 NETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFV 414
E P VT++ +++ K G L A LY M+ S PDI TY++L++G C +
Sbjct: 320 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 379
Query: 415 DEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSL 474
DE + L+ +C P +VTY+ I G + +E EL+ EM +G+V + +T+++L
Sbjct: 380 DEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL 439
Query: 475 AWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRC 534
GF + A + K+M Y ++ GLCK K+ A+ + + RS
Sbjct: 440 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 499
Query: 535 KPDEKIYDALIKAVADSGMVKEANDL 560
+PD Y+ +I+ + +G V++ +L
Sbjct: 500 EPDIYTYNIMIEGMCKAGKVEDGWEL 525
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 184/383 (48%)
Query: 163 LIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPD 222
L I ++D + MV S P ++ N ++ + K + + L E M G S D
Sbjct: 58 LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHD 117
Query: 223 AITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLE 282
TY+ I + + A++ ++ G P ++T + L+ C A+ +++
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD 177
Query: 283 DMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHG 342
M G PD T+ +L+ E ++ ++ RG QP+ VTY T+++ L G
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 343 YWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYN 402
D +L+ M + V YN +++GLCK +D A++L++ M ++ PD+ TY+
Sbjct: 238 DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYS 297
Query: 403 TLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGK 462
+L+S LC G + +LL + +P +VT++ ID + G + A++LY EMI +
Sbjct: 298 SLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 357
Query: 463 GIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIA 522
I PD T+SSL GFC D+L+EA + + M KD Y +I G CK ++V+
Sbjct: 358 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEG 417
Query: 523 IQALDLMVRSRCKPDEKIYDALI 545
++ M + + Y LI
Sbjct: 418 MELFREMSQRGLVGNTVTYTTLI 440
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 164/358 (45%)
Query: 207 AVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIE 266
AVDL DM S P + +N ++ + F +S + G L TY++ I
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 267 LVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQP 326
CR AL VL M G PDI+T +SL++ + ++ ++ G +P
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 327 NAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLY 386
+ T+ TLIH L H +++ M + P VTY ++NGLCK G +D A+SL
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLL 246
Query: 387 STMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARM 446
M D+V YNT++ GLCK +D+ + L + P + TY+ I L
Sbjct: 247 KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 306
Query: 447 GSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAY 506
G A L S+MI + I P+ +T S+L F +L EA +L EM K+ Y
Sbjct: 307 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 366
Query: 507 RCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
+I G C ++D A +LM+ C P+ Y LIK + V+E +L + +
Sbjct: 367 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM 424
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 166/357 (46%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
+ D N I+ LC + A L M K P + ++LI L G+
Sbjct: 254 IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 313
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
++++ M+ P+V+T + +I K G L A L ++M PD TY+++I G
Sbjct: 314 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
+EA ++ + K C P ++TY+ LI+ C+ +E+ +M+ G +
Sbjct: 374 CMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 433
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
+TY +L+ + + +V ++S G+ PN +TYN L+ L +G V E
Sbjct: 434 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY 493
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
+ ++ P TYNIM+ G+CK+G ++ L+ + + P+++ YNT++SG C++G
Sbjct: 494 LQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGS 553
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEIT 470
+E LL + P TYN I R G E++ EL EM G D T
Sbjct: 554 KEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 610
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 142/300 (47%), Gaps = 4/300 (1%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T + ++ G+L+ A +L + M ++S P + ++LI G ++D+ + +M
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 389
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
+ P+V+T + +I G CK ++ ++L +MS G + +TY T+I G F +
Sbjct: 390 ISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 449
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
+ A +K + G P ++TY +L++ +C+ +A+ V E + PDI TYN +
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS 359
+ K G E+ + + NL +G+ PN + YNT+I G + D +L+ M E
Sbjct: 510 IEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGP 569
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTY----NTLLSGLCKEGFVD 415
P TYN ++ + G + + L M S D T N L G + F+D
Sbjct: 570 LPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLD 629
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 131/293 (44%)
Query: 277 ALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIH 336
A+++ DM +P I+ +N L+S AK +E + + + G+ + TY+ I+
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 337 SLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFP 396
VL M + P VT + +LNG C S + A++L MV P
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 397 DIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELY 456
D T+ TL+ GL E + L+ + C P LVTY ++GL + G ++ A L
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLL 246
Query: 457 SEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQ 516
+M I D + ++++ G C +++A+ L EM K + Y +I LC
Sbjct: 247 KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 306
Query: 517 RKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKI 569
+ A + L M+ + P+ + ALI A G + EA L+ +I+ I
Sbjct: 307 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 129/267 (48%), Gaps = 1/267 (0%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D FT + ++ C RL A + E+M K P+ + + LI+G K ++++G ++
Sbjct: 362 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF 421
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
M G V + +T +I G + +A + + M G P+ +TYN ++ G+
Sbjct: 422 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 481
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
G +A+ ++ R P + TY ++IE +C+ E+ +++++G P++I Y
Sbjct: 482 GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAY 541
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
N+++S ++G EE ++ + G PN+ TYNTLI + G + ++++ M
Sbjct: 542 NTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRS 601
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAI 383
T ++ N L G LD++
Sbjct: 602 CGFAGDASTIGLVTNML-HDGRLDKSF 627
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%)
Query: 368 IMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGT 427
I+ N L +D A+ L+ MV FP IV +N LLS + K + I L +
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 428 NCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEA 487
S L TY+I I+ R + A + ++M+ G PD +T SSL G+C ++ +A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 488 MELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKA 547
+ L+ +M + K + +I GL K A+ +D MV+ C+PD Y ++
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 548 VADSGMVKEANDLHQRLIEWKI 569
+ G + A L +++ + KI
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKI 254
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 104/221 (47%), Gaps = 3/221 (1%)
Query: 347 VDDVLEIMNE--TSSP-PTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNT 403
VDD +++ + S P P+ V +N +L+ + K + ISL M + D+ TY+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 404 LLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKG 463
++ C+ + + +L + P +VT + ++G + A L +M+ G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 464 IVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAI 523
PD T ++L G ++ EA+ L+ +M ++ + Y V+ GLCK+ +D+A+
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 524 QALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
L M + + + D IY+ +I + + +A +L +
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM 284
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 212/408 (51%)
Query: 159 LIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSG 218
L+ GL ++ + ++++ MV G P +IT N ++ GLC G + AV L++ M +G
Sbjct: 164 LLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETG 223
Query: 219 CSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRAL 278
P+ +TY ++ M G A+ + + + Y+++I+ +C+ A
Sbjct: 224 FQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAF 283
Query: 279 EVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSL 338
+ +M ++G DIITYN+L+ G +++ ++ +++ R + PN VT++ LI S
Sbjct: 284 NLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSF 343
Query: 339 SSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDI 398
G D +L+ M + P +TYN +++G CK L+ AI + M+S+ C PDI
Sbjct: 344 VKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDI 403
Query: 399 VTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSE 458
+T+N L++G CK +D+G++L ++ VTYN + G + G +E AK+L+ E
Sbjct: 404 MTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQE 463
Query: 459 MIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRK 518
M+ + + PD +++ L G C +LE+A+E+ ++ K ++ Y +I G+C K
Sbjct: 464 MVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASK 523
Query: 519 VDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
VD A + K D + Y+ +I + + +A+ L +++ E
Sbjct: 524 VDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTE 571
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 197/379 (51%)
Query: 183 GGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEA 242
G PD + N ++ GLC + A++LV+ M G P IT NT++ G+ G ++A
Sbjct: 153 GYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDA 212
Query: 243 VSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSF 302
V + G P +TY ++ ++C+ A+E+L M D + Y+ ++
Sbjct: 213 VVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 303 TAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPT 362
K G + + + + + +G + + +TYNTLI + G WD +L M + P
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 363 RVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLY 422
VT++++++ K G L A L M+ P+ +TYN+L+ G CKE ++E IQ++
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD 392
Query: 423 LLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVD 482
L+ C P ++T+NI I+G + ++ EL+ EM +G++ + +T+++L GFC
Sbjct: 393 LMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSG 452
Query: 483 QLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYD 542
+LE A +L +EM + + +Y+ ++ GLC +++ A++ + +S+ + D IY
Sbjct: 453 KLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYM 512
Query: 543 ALIKAVADSGMVKEANDLH 561
+I + ++ V +A DL
Sbjct: 513 IIIHGMCNASKVDDAWDLF 531
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 115/431 (26%), Positives = 202/431 (46%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D N +L LC R+ A L++ M P + L+ GL G++ +I
Sbjct: 157 DTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLI 216
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
+ MV +G P+ +T V+ +CK G A++L+ M DA+ Y+ II G+
Sbjct: 217 DRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKD 276
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
G+ + A + + + KG +ITY LI C ++L DM P+++T+
Sbjct: 277 GSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTF 336
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
+ L+ K+G E ++ ++ RG+ PN +TYN+LI + ++++M
Sbjct: 337 SVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMIS 396
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDE 416
P +T+NI++NG CK+ +D + L+ M + VTYNTL+ G C+ G ++
Sbjct: 397 KGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEV 456
Query: 417 GIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAW 476
+L + P +V+Y I +DGL G +E A E++ ++ + D + +
Sbjct: 457 AKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIH 516
Query: 477 GFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKP 536
G C ++++A +L + K K+ AY +I LC++ + A M P
Sbjct: 517 GMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAP 576
Query: 537 DEKIYDALIKA 547
DE Y+ LI+A
Sbjct: 577 DELTYNILIRA 587
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 199/408 (48%), Gaps = 1/408 (0%)
Query: 162 GLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSP 221
GL+ I + D + M+ S +P VI N + + K + + L + M G +
Sbjct: 63 GLVGI-KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAH 121
Query: 222 DAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVL 281
T + +I + A S ++ G P + + L+ +C C ALE++
Sbjct: 122 SIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELV 181
Query: 282 EDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSH 341
+ M G P +IT N+LV+ G + ++I ++ G QPN VTY +++ +
Sbjct: 182 DRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKS 241
Query: 342 GYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTY 401
G ++L M E + V Y+I+++GLCK G LD A +L++ M + DI+TY
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITY 301
Query: 402 NTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIG 461
NTL+ G C G D+G +LL + SP +VT+++ ID + G + A +L EM+
Sbjct: 302 NTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQ 361
Query: 462 KGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDI 521
+GI P+ IT++SL GFC ++LEEA++++ M K + +I G CK ++D
Sbjct: 362 RGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDD 421
Query: 522 AIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKI 569
++ M + Y+ L++ SG ++ A L Q ++ ++
Sbjct: 422 GLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRV 469
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/439 (28%), Positives = 207/439 (47%), Gaps = 49/439 (11%)
Query: 97 ESGELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSC 156
E+ ELVD + P + T N ++ LC G++ A LI+ M P+ +
Sbjct: 176 EALELVDRMVEMGHKPTL----ITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTY 231
Query: 157 TNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSL 216
++ + K GQ +++ M D + +++I GLCK G L +A +L +M +
Sbjct: 232 GPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 291
Query: 217 SGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIR 276
G D ITYNT+I G + G +++ +D +++ P ++T++VLI+ +
Sbjct: 292 KGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLRE 351
Query: 277 ALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIH 336
A ++L++M G P+ ITYNSL+ K+ EE ++ ++S+G P+ +T+N LI
Sbjct: 352 ADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILI- 410
Query: 337 SLSSHGYWDG--VDDVLEIMNETS---SPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVS 391
+GY +DD LE+ E S VTYN ++ G C+SG L+ A L+ MVS
Sbjct: 411 ----NGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVS 466
Query: 392 ESCFPDIVTYNTLLSGLCKEGFVDEGIQLL---------------YLLTGTNCSPGLV-- 434
PDIV+Y LL GLC G +++ +++ ++ C+ V
Sbjct: 467 RRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDD 526
Query: 435 ------------------TYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAW 476
YNI I L R S+ A L+ +M +G PDE+T++ L
Sbjct: 527 AWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIR 586
Query: 477 GFCGVDQLEEAMELLKEMH 495
G D A EL++EM
Sbjct: 587 AHLGDDDATTAAELIEEMK 605
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 196/433 (45%)
Query: 137 AARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIG 196
A L M + +P L + K Q + + M G + T +++I
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 197 GLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPP 256
C+ L A + + G PD + +NT++ G+ + +EA+ + G P
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 257 YLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVI 316
LIT L+ +C A+ +++ M G P+ +TY +++ K G ++
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL 251
Query: 317 SNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKS 376
+ R ++ +AV Y+ +I L G D ++ M +TYN ++ G C +
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311
Query: 377 GLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTY 436
G D L M+ P++VT++ L+ KEG + E QLL + +P +TY
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITY 371
Query: 437 NIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHK 496
N IDG + +E A ++ MI KG PD +T + L G+C +++++ +EL +EM
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSL 431
Query: 497 KDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKE 556
+ Y ++ G C+ K+++A + MV R +PD Y L+ + D+G +++
Sbjct: 432 RGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEK 491
Query: 557 ANDLHQRLIEWKI 569
A ++ ++ + K+
Sbjct: 492 ALEIFGKIEKSKM 504
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 208 bits (529), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 227/446 (50%), Gaps = 5/446 (1%)
Query: 124 ILQNLCTRGRLMAAARLIEIMARKSQIPHFP---SCTNLIRGLIKIGQIDKGCKIINIMV 180
I+ N C R R ++ A M + ++ + P + + LI GL G++ + ++++ MV
Sbjct: 112 IMINCCCRCRKLSLA--FSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169
Query: 181 MSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFN 240
G P +IT N ++ GLC G + AV L++ M +G P+ +TY +++ M G
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229
Query: 241 EAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLV 300
A+ + + + Y+++I+ +C+ A + +M ++G DII Y +L+
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289
Query: 301 SFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSP 360
G +++ ++ +++ R + P+ V ++ LI G +++ + M +
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Query: 361 PTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQL 420
P VTY +++G CK LD+A + MVS+ C P+I T+N L++G CK +D+G++L
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409
Query: 421 LYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCG 480
++ VTYN I G +G +E AKEL+ EM+ + + PD +++ L G C
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469
Query: 481 VDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKI 540
+ E+A+E+ +++ K ++ Y +I G+C KVD A + KPD K
Sbjct: 470 NGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKT 529
Query: 541 YDALIKAVADSGMVKEANDLHQRLIE 566
Y+ +I + G + EA+ L +++ E
Sbjct: 530 YNIMIGGLCKKGSLSEADLLFRKMEE 555
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 117/431 (27%), Positives = 201/431 (46%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T + ++ LC GR+ A L++ M P + L+ GL G++ +I
Sbjct: 141 DTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLI 200
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
+ MV +G P+ +T V+ +CK G A++L+ M DA+ Y+ II G+
Sbjct: 201 DRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKD 260
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
G+ + A + + + KG +I YT LI C ++L DM PD++ +
Sbjct: 261 GSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAF 320
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
++L+ K+G E + ++ RG+ P+ VTY +LI D + +L++M
Sbjct: 321 SALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVS 380
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDE 416
P T+NI++NG CK+ L+D + L+ M D VTYNTL+ G C+ G ++
Sbjct: 381 KGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 440
Query: 417 GIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAW 476
+L + P +V+Y I +DGL G E A E++ ++ + D ++ +
Sbjct: 441 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 500
Query: 477 GFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKP 536
G C ++++A +L + K K Y +I GLCK+ + A M P
Sbjct: 501 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSP 560
Query: 537 DEKIYDALIKA 547
+ Y+ LI+A
Sbjct: 561 NGCTYNILIRA 571
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 197/405 (48%), Gaps = 14/405 (3%)
Query: 97 ESGELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSC 156
E+ ELVD + P + T N ++ LC G++ A LI+ M P+ +
Sbjct: 160 EALELVDRMVEMGHKPTL----ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215
Query: 157 TNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSL 216
+++ + K GQ +++ M D + +++I GLCK G L +A +L +M +
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275
Query: 217 SGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIR 276
G D I Y T+IRG G +++ +D +++ P ++ ++ LI+ +
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 277 ALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIH 336
A E+ ++M G PD +TY SL+ K+ ++ ++ ++S+G PN T+N LI+
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Query: 337 SLSSHGYWDG--VDDVLEIMNETS---SPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVS 391
GY +DD LE+ + S VTYN ++ G C+ G L+ A L+ MVS
Sbjct: 396 -----GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVS 450
Query: 392 ESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMES 451
PDIV+Y LL GLC G ++ +++ + + + YNI I G+ ++
Sbjct: 451 RRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 510
Query: 452 AKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHK 496
A +L+ + KG+ PD T++ + G C L EA L ++M +
Sbjct: 511 AWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEE 555
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 194/408 (47%), Gaps = 1/408 (0%)
Query: 162 GLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSP 221
G++ I + D + M S P +I + + + + +DL + M L G +
Sbjct: 47 GIVDIKE-DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAH 105
Query: 222 DAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVL 281
+ T + +I + A S ++ G P +T++ LI +C ALE++
Sbjct: 106 NLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELV 165
Query: 282 EDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSH 341
+ M G P +IT N+LV+ G + L+I ++ G QPN VTY ++ +
Sbjct: 166 DRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKS 225
Query: 342 GYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTY 401
G ++L M E V Y+I+++GLCK G LD A +L++ M + DI+ Y
Sbjct: 226 GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIY 285
Query: 402 NTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIG 461
TL+ G C G D+G +LL + +P +V ++ ID + G + A+EL+ EMI
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ 345
Query: 462 KGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDI 521
+GI PD +T++SL GFC +QL++A +L M K + +I G CK +D
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDD 405
Query: 522 AIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKI 569
++ M D Y+ LI+ + G ++ A +L Q ++ ++
Sbjct: 406 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453
Score = 165 bits (417), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 110/459 (23%), Positives = 206/459 (44%), Gaps = 35/459 (7%)
Query: 137 AARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIG 196
A L + M R P + L + + Q D + M + G ++ T +++I
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 197 GLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPP 256
C+ L A + + G PD +T++T+I G+ +G +EA+ + G P
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 257 YLITYTVLI-----------------------------------ELVCRYCGAIRALEVL 281
LIT L+ +++C+ A+E+L
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235
Query: 282 EDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSH 341
M D + Y+ ++ K G + + + + + +G + + + Y TLI
Sbjct: 236 RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295
Query: 342 GYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTY 401
G WD +L M + P V ++ +++ K G L A L+ M+ PD VTY
Sbjct: 296 GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355
Query: 402 NTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIG 461
+L+ G CKE +D+ +L L+ C P + T+NI I+G + ++ EL+ +M
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 415
Query: 462 KGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDI 521
+G+V D +T+++L GFC + +LE A EL +EM + + +Y+ ++ GLC + +
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475
Query: 522 AIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDL 560
A++ + + +S+ + D IY+ +I + ++ V +A DL
Sbjct: 476 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 514
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 167/357 (46%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
++ D + I+ LC G L A L M K T LIRG G+ D G
Sbjct: 243 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGA 302
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
K++ M+ PDV+ + +I K G L+ A +L ++M G SPD +TY ++I G
Sbjct: 303 KLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGF 362
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
+ ++A + KGC P + T+ +LI C+ LE+ M++ G D
Sbjct: 363 CKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADT 422
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
+TYN+L+ + G E + ++SR ++P+ V+Y L+ L +G + ++ E
Sbjct: 423 VTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK 482
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
+ ++ YNI+++G+C + +D A L+ ++ + PD+ TYN ++ GLCK+G
Sbjct: 483 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGS 542
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEIT 470
+ E L + SP TYNI I G + +L E+ G D T
Sbjct: 543 LSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDAST 599
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 1/201 (0%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
V D T N ++Q C G+L A L + M + P S L+ GL G+ +K
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
+I + S D+ N++I G+C + A DL + L G PD TYN +I G+
Sbjct: 478 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGL 537
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
KG+ +EA ++ G P TY +LI A ++ +++E++ G D
Sbjct: 538 CKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDA 597
Query: 294 ITYNSLVSFTAKQGVYEETYL 314
T +V + G ++++L
Sbjct: 598 STVKMVVDMLS-DGRLKKSFL 617
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 200/384 (52%)
Query: 183 GGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEA 242
G PD T N +I GL G + AV LV+ M +GC PD +TYN+I+ G+ G+ + A
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212
Query: 243 VSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSF 302
+ + + + TY+ +I+ +CR A+ + ++M +G ++TYNSLV
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 303 TAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPT 362
K G + + L++ +++SR + PN +T+N L+ G +++ + M P
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Query: 363 RVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLY 422
+TYN +++G C L A ++ MV C PDIVT+ +L+ G C VD+G+++
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFR 392
Query: 423 LLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVD 482
++ VTY+I + G + G ++ A+EL+ EM+ G++PD +T+ L G C
Sbjct: 393 NISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNG 452
Query: 483 QLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYD 542
+LE+A+E+ +++ K + Y +I G+CK KV+ A + KP+ Y
Sbjct: 453 KLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYT 512
Query: 543 ALIKAVADSGMVKEANDLHQRLIE 566
+I + G + EAN L +++ E
Sbjct: 513 VMISGLCKKGSLSEANILLRKMEE 536
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 186/395 (47%), Gaps = 35/395 (8%)
Query: 151 PHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDL 210
P + LI+GL G++ + +++ MV +G PDV+T N ++ G+C+ G A+DL
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215
Query: 211 VEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCR 270
+ M D TY+TII + G + A+S +K+ KG ++TY L+ +C+
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 271 YCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVT 330
+L+DM P++IT+N L+ K+G +E + +++RG+ PN +T
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335
Query: 331 YNTLIHSLSSHGYWDGVDDVLEIMNETSSPP----------------------------- 361
YNTL+ +++L++M P
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395
Query: 362 ------TRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVD 415
VTY+I++ G C+SG + A L+ MVS PD++TY LL GLC G ++
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455
Query: 416 EGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLA 475
+ +++ L + G+V Y I+G+ + G +E A L+ + KG+ P+ +T++ +
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515
Query: 476 WGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVI 510
G C L EA LL++M + Y +I
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 186/384 (48%), Gaps = 9/384 (2%)
Query: 196 GGLCKRGYLKS---------AVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFW 246
G +C R L+S A+ L ++M S P + ++ + FN + F
Sbjct: 52 GNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFC 111
Query: 247 KDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQ 306
K G + T ++I CR C A VL + G PD T+N+L+ +
Sbjct: 112 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE 171
Query: 307 GVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTY 366
G E +++ ++ G QP+ VTYN++++ + G D+L M E + TY
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231
Query: 367 NIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTG 426
+ +++ LC+ G +D AISL+ M ++ +VTYN+L+ GLCK G ++G LL +
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291
Query: 427 TNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEE 486
P ++T+N+ +D + G ++ A ELY EMI +GI P+ IT+++L G+C ++L E
Sbjct: 292 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE 351
Query: 487 AMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIK 546
A +L M + + +I G C ++VD ++ + + + Y L++
Sbjct: 352 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 411
Query: 547 AVADSGMVKEANDLHQRLIEWKIL 570
SG +K A +L Q ++ +L
Sbjct: 412 GFCQSGKIKLAEELFQEMVSHGVL 435
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 177/379 (46%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T N I+ +C G A L+ M ++ + + +I L + G ID +
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
M G V+T N ++ GLCK G L++DM P+ IT+N ++ +
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
G EA +K+ + +G P +ITY L++ C A +L+ M C PDI+T+
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
SL+ ++ V N+ RG+ NAVTY+ L+ G +++ + M
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDE 416
P +TY I+L+GLC +G L++A+ ++ + IV Y T++ G+CK G V++
Sbjct: 432 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 491
Query: 417 GIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAW 476
L L P ++TY + I GL + GS+ A L +M G P++ T+++L
Sbjct: 492 AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551
Query: 477 GFCGVDQLEEAMELLKEMH 495
L + +L++EM
Sbjct: 552 AHLRDGDLTASAKLIEEMK 570
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 199/452 (44%), Gaps = 44/452 (9%)
Query: 127 NLCTRGRLMA---------AARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIIN 177
N+C R RL + A L + M R +P + + + Q +
Sbjct: 53 NVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCK 112
Query: 178 IMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKG 237
+ ++G ++ T N++I C+ A ++ + G PD T+NT+I+G+F +G
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 172
Query: 238 NFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYN 297
+EAV +++ M GC PD++TYN
Sbjct: 173 KVSEAVV-----------------------------------LVDRMVENGCQPDVVTYN 197
Query: 298 SLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNET 357
S+V+ + G ++ + R ++ + TY+T+I SL G D + + M
Sbjct: 198 SIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK 257
Query: 358 SSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEG 417
+ VTYN ++ GLCK+G + L MVS P+++T+N LL KEG + E
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 418 IQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWG 477
+L + SP ++TYN +DG + A + M+ PD +T +SL G
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377
Query: 478 FCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPD 537
+C V ++++ M++ + + K+ Y ++ G C+ K+ +A + MV PD
Sbjct: 378 YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD 437
Query: 538 EKIYDALIKAVADSGMVKEANDLHQRLIEWKI 569
Y L+ + D+G +++A ++ + L + K+
Sbjct: 438 VMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 180/354 (50%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
V+ D FT + I+ +LC G + AA L + M K + +L+RGL K G+ + G
Sbjct: 224 VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGA 283
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
++ MV VP+VIT N+++ K G L+ A +L ++M G SP+ ITYNT++ G
Sbjct: 284 LLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGY 343
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
+ +EA + +R C P ++T+T LI+ C ++V +++ G +
Sbjct: 344 CMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANA 403
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
+TY+ LV + G + + ++S G+ P+ +TY L+ L +G + ++ E
Sbjct: 404 VTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFED 463
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
+ ++ V Y ++ G+CK G ++ A +L+ ++ + P+++TY ++SGLCK+G
Sbjct: 464 LQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 523
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPD 467
+ E LL + +P TYN I R G + ++ +L EM G D
Sbjct: 524 LSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 577
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 114/256 (44%), Gaps = 35/256 (13%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T N ++ C + RL A ++++M R P + T+LI+G + ++D G K+ +
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
G V + +T ++++ G C+ G +K A +L ++M G PD +TY ++ G+ D G
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454
Query: 240 NEAVSFWKDQLR-----------------------------------KGCPPYLITYTVL 264
+A+ ++D + KG P ++TYTV+
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 514
Query: 265 IELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGM 324
I +C+ A +L M +G P+ TYN+L+ + G + +I + S G
Sbjct: 515 ISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574
Query: 325 QPNAVTYNTLIHSLSS 340
+A + +I L S
Sbjct: 575 SADASSIKMVIDMLLS 590
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 123/438 (28%), Positives = 216/438 (49%)
Query: 133 RLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCN 192
R A L M +P T L+ + + + M + G D+ +
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 193 MVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRK 252
++I C+ L A+ ++ M G P +T+ +++ G +A S ++
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 253 GCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEET 312
G P ++ Y LI+ +C+ ALE+L +M +G D++TYN+L++ G + +
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 313 YLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNG 372
++ +++ R + P+ VT+ LI G D ++ + M ++S P VTYN ++NG
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290
Query: 373 LCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPG 432
LC G L A + M S+ CFP++VTYNTL+SG CK VDEG++L ++ +
Sbjct: 291 LCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNAD 350
Query: 433 LVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLK 492
+ TYN I G ++G + A +++ M+ + + PD ITH L G C ++E A+
Sbjct: 351 IFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFD 410
Query: 493 EMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSG 552
+M + ++ I AY +I GLCK KV+ A + + KPD + Y +I + +G
Sbjct: 411 DMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNG 470
Query: 553 MVKEANDLHQRLIEWKIL 570
+EA++L +R+ E I+
Sbjct: 471 PRREADELIRRMKEEGII 488
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 193/388 (49%), Gaps = 2/388 (0%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
+ +D ++ ++ C RL A ++ M + P + +L+ G + +I
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
++ +MV SG P+V+ N +I GLCK G L A++L+ +M G D +TYNT++ G+
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
G +++A +D +++ P ++T+T LI++ + A E+ ++M P+
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
+TYNS+++ G + + S+G PN VTYNTLI D + +
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
M+ TYN +++G C+ G L A+ ++ MVS PDI+T+ LL GLC G
Sbjct: 342 MSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGE 401
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSS 473
++ + + + G+V YNI I GL + +E A EL+ + +G+ PD T++
Sbjct: 402 IESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTI 461
Query: 474 LAWGFCGVDQLEEAMELLKEMHKKDEKI 501
+ G C EA EL++ M K+E I
Sbjct: 462 MILGLCKNGPRREADELIRRM--KEEGI 487
Score = 165 bits (417), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 165/346 (47%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T +L C R+ A L+ +M + P+ LI GL K G+++ +++N M
Sbjct: 143 TFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEM 202
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
G DV+T N ++ GLC G A ++ DM +PD +T+ +I +GN
Sbjct: 203 EKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNL 262
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
+EA +K+ ++ P +TY +I +C + A + + MA +GC+P+++TYN+L
Sbjct: 263 DEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTL 322
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS 359
+S K + +E + + G + TYNTLIH G D+ M
Sbjct: 323 ISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRV 382
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQ 419
P +T+ I+L+GLC +G ++ A+ + M + IV YN ++ GLCK V++ +
Sbjct: 383 TPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWE 442
Query: 420 LLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIV 465
L L P TY I I GL + G A EL M +GI+
Sbjct: 443 LFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 205 bits (522), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 198/390 (50%), Gaps = 3/390 (0%)
Query: 151 PHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDL 210
P+ S +I+ L K+ +D+ ++ M +PD T ++ GLCK + AV L
Sbjct: 185 PNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLL 244
Query: 211 VEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCR 270
+++M GCSP + YN +I G+ KG+ + KGC P +TY LI +C
Sbjct: 245 LDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCL 304
Query: 271 YCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVT 330
+A+ +LE M C P+ +TY +L++ KQ + ++S++ RG N
Sbjct: 305 KGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHI 364
Query: 331 YNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMV 390
Y+ LI L G + + M E P V Y+++++GLC+ G + A + + M+
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMI 424
Query: 391 SESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSME 450
+ C P+ TY++L+ G K G +E +Q+ + T CS Y++ IDGL +G ++
Sbjct: 425 ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVK 484
Query: 451 SAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKH---TAYR 507
A ++S+M+ GI PD + +SS+ G CG+ ++ A++L EM ++E Y
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYN 544
Query: 508 CVILGLCKQRKVDIAIQALDLMVRSRCKPD 537
++ GLC Q+ + A+ L+ M+ C PD
Sbjct: 545 ILLDGLCMQKDISRAVDLLNSMLDRGCDPD 574
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/346 (31%), Positives = 171/346 (49%)
Query: 220 SPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALE 279
SP+ +++N +I+ + + A+ ++ + C P TY L++ +C+ A+
Sbjct: 184 SPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVL 243
Query: 280 VLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLS 339
+L++M EGC P + YN L+ K+G ++ N+ +G PN VTYNTLIH L
Sbjct: 244 LLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLC 303
Query: 340 SHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIV 399
G D +LE M + P VTY ++NGL K A+ L S+M +
Sbjct: 304 LKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQH 363
Query: 400 TYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEM 459
Y+ L+SGL KEG +E + L + C P +V Y++ +DGL R G AKE+ + M
Sbjct: 364 IYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRM 423
Query: 460 IGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKV 519
I G +P+ T+SSL GF EEA+++ KEM K Y +I GLC +V
Sbjct: 424 IASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRV 483
Query: 520 DIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLI 565
A+ M+ KPD Y ++IK + G + A L+ ++
Sbjct: 484 KEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEML 529
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 192/384 (50%), Gaps = 9/384 (2%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEI---MARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
+G + N +++ LC +L R IE+ M + +P + L+ GL K +ID+
Sbjct: 186 NGLSFNLVIKALC---KLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
+++ M G P + N++I GLCK+G L LV++M L GC P+ +TYNT+I G+
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
KG ++AVS + + C P +TY LI + + A A+ +L M G + +
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQ 362
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
Y+ L+S K+G EE + + +G +PN V Y+ L+ L G + ++L
Sbjct: 363 HIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNR 422
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
M + P TY+ ++ G K+GL + A+ ++ M C + Y+ L+ GLC G
Sbjct: 423 MIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGR 482
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGK---GIVPDEIT 470
V E + + + P V Y+ I GL +GSM++A +LY EM+ + PD +T
Sbjct: 483 VKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVT 542
Query: 471 HSSLAWGFCGVDQLEEAMELLKEM 494
++ L G C + A++LL M
Sbjct: 543 YNILLDGLCMQKDISRAVDLLNSM 566
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/446 (26%), Positives = 190/446 (42%), Gaps = 87/446 (19%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
DG+T ++ LC R+ A L++ M + P LI GL K G + + K++
Sbjct: 221 DGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLV 280
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM--- 233
+ M + G VP+ +T N +I GLC +G L AV L+E M S C P+ +TY T+I G+
Sbjct: 281 DNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQ 340
Query: 234 --------------------------------FDKGNFNEAVSFWKDQLRKGCPPYLITY 261
F +G EA+S W+ KGC P ++ Y
Sbjct: 341 RRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVY 400
Query: 262 TVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEET--------- 312
+VL++ +CR A E+L M GC P+ TY+SL+ K G+ EE
Sbjct: 401 SVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDK 460
Query: 313 --------------------------YLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDG 346
+V S +L+ G++P+ V Y+++I L G D
Sbjct: 461 TGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDA 520
Query: 347 VDDVLEIM---NETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNT 403
+ M E S P VTYNI+L+GLC + RA+ L ++M+ C PD++T NT
Sbjct: 521 ALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNT 580
Query: 404 LLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKG 463
L+ L ++ +C G + L + + A + M+GK
Sbjct: 581 FLNTLSEK--------------SNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKY 626
Query: 464 IVPDEITHSSLAWGFCGVDQLEEAME 489
+ P T + + C ++ A++
Sbjct: 627 LAPKTSTWAMIVREICKPKKINAAID 652
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 128/241 (53%), Gaps = 4/241 (1%)
Query: 330 TYNTLIHSLSSHG-YWDGVDDVLEIMNETSS---PPTRVTYNIMLNGLCKSGLLDRAISL 385
++N++++ + + G Y G++ ++N + P +++N+++ LCK +DRAI +
Sbjct: 150 SFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEV 209
Query: 386 YSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLAR 445
+ M C PD TY TL+ GLCKE +DE + LL + CSP V YN+ IDGL +
Sbjct: 210 FRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCK 269
Query: 446 MGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTA 505
G + +L M KG VP+E+T+++L G C +L++A+ LL+ M
Sbjct: 270 KGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVT 329
Query: 506 YRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLI 565
Y +I GL KQR+ A++ L M ++ IY LI + G +EA L +++
Sbjct: 330 YGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMA 389
Query: 566 E 566
E
Sbjct: 390 E 390
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 126/250 (50%), Gaps = 5/250 (2%)
Query: 330 TYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTM 389
T +++I S ++ G +D V+ +L + + ++ ++ K+ L D+A+ L+ M
Sbjct: 79 TLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRM 138
Query: 390 VSE-SCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTN----CSPGLVTYNIAIDGLA 444
V E C + ++N++L+ + EG G++ + +N SP +++N+ I L
Sbjct: 139 VDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALC 198
Query: 445 RMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHT 504
++ ++ A E++ M + +PD T+ +L G C ++++EA+ LL EM +
Sbjct: 199 KLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPV 258
Query: 505 AYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
Y +I GLCK+ + + +D M C P+E Y+ LI + G + +A L +R+
Sbjct: 259 IYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERM 318
Query: 565 IEWKILKTEI 574
+ K + ++
Sbjct: 319 VSSKCIPNDV 328
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 205 bits (521), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 129/449 (28%), Positives = 219/449 (48%), Gaps = 1/449 (0%)
Query: 119 FTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINI 178
FT N +Q LC RG L A R++ + + P + NLI GL K + + +
Sbjct: 252 FTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGK 311
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN 238
MV G PD T N +I G CK G ++ A +V D +G PD TY ++I G+ +G
Sbjct: 312 MVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGE 371
Query: 239 FNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNS 298
N A++ + + L KG P +I Y LI+ + + A ++ +M+ +G P++ T+N
Sbjct: 372 TNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNI 431
Query: 299 LVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETS 358
LV+ K G + ++ ++S+G P+ T+N LIH S+ + ++L++M +
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNG 491
Query: 359 SPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGI 418
P TYN +LNGLCK+ + + Y TMV + C P++ T+N LL LC+ +DE +
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEAL 551
Query: 419 QLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEI-THSSLAWG 477
LL + + +P VT+ IDG + G ++ A L+ +M V T++ +
Sbjct: 552 GLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHA 611
Query: 478 FCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPD 537
F + A +L +EM + YR ++ G CK V++ + L M+ + P
Sbjct: 612 FTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPS 671
Query: 538 EKIYDALIKAVADSGMVKEANDLHQRLIE 566
+I + V EA + R+++
Sbjct: 672 LTTLGRVINCLCVEDRVYEAAGIIHRMVQ 700
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 124/409 (30%), Positives = 196/409 (47%), Gaps = 1/409 (0%)
Query: 159 LIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSG 218
L+R L K G + + K+++ ++ G +P++ T N+ I GLC+RG L AV +V + G
Sbjct: 222 LLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQG 281
Query: 219 CSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRAL 278
PD ITYN +I G+ F EA + + +G P TY LI C+ A
Sbjct: 282 PKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAE 341
Query: 279 EVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSL 338
++ D G PD TY SL+ +G + + L +G++PN + YNTLI L
Sbjct: 342 RIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401
Query: 339 SSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDI 398
S+ G + M+E P T+NI++NGLCK G + A L M+S+ FPDI
Sbjct: 402 SNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461
Query: 399 VTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSE 458
T+N L+ G + ++ +++L ++ P + TYN ++GL + E E Y
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKT 521
Query: 459 MIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRK 518
M+ KG P+ T + L C +L+EA+ LL+EM K + +I G CK
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581
Query: 519 VDIAIQALDLMVRS-RCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
+D A M + + Y+ +I A + V A L Q +++
Sbjct: 582 LDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVD 630
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/436 (27%), Positives = 212/436 (48%), Gaps = 1/436 (0%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T NK+L+ LC +G + +L++ + ++ +P+ + I+GL + G++D +++ +
Sbjct: 218 TFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCL 277
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
+ G PDVIT N +I GLCK + A + M G PD+ TYNT+I G G
Sbjct: 278 IEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMV 337
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
A D + G P TY LI+ +C RAL + + +G P++I YN+L
Sbjct: 338 QLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTL 397
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS 359
+ + QG+ E + + + +G+ P T+N L++ L G D ++++M
Sbjct: 398 IKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY 457
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQ 419
P T+NI+++G ++ A+ + M+ PD+ TYN+LL+GLCK ++ ++
Sbjct: 458 FPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVME 517
Query: 420 LLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFC 479
+ C+P L T+NI ++ L R ++ A L EM K + PD +T +L GFC
Sbjct: 518 TYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFC 577
Query: 480 GVDQLEEAMELLKEMHKKDEKIKHT-AYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDE 538
L+ A L ++M + + T Y +I ++ V +A + MV PD
Sbjct: 578 KNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDG 637
Query: 539 KIYDALIKAVADSGMV 554
Y ++ +G V
Sbjct: 638 YTYRLMVDGFCKTGNV 653
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/449 (26%), Positives = 214/449 (47%), Gaps = 6/449 (1%)
Query: 119 FTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINI 178
F+ N I+ L G A ++ M + P S T ++ K + +++N
Sbjct: 112 FSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNN 171
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN 238
M G +V+ V+GG + + +L M SG S T+N ++R + KG+
Sbjct: 172 MSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGD 231
Query: 239 FNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYC---GAIRALEVLEDMAMEGCYPDIIT 295
E +++G P L TY + I+ +C+ GA+R + L + +G PD+IT
Sbjct: 232 VKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIE---QGPKPDVIT 288
Query: 296 YNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMN 355
YN+L+ K ++E + + +++ G++P++ TYNTLI G + ++
Sbjct: 289 YNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAV 348
Query: 356 ETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVD 415
P + TY +++GLC G +RA++L++ + + P+++ YNTL+ GL +G +
Sbjct: 349 FNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMIL 408
Query: 416 EGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLA 475
E QL ++ P + T+NI ++GL +MG + A L MI KG PD T + L
Sbjct: 409 EAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Query: 476 WGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCK 535
G+ ++E A+E+L M Y ++ GLCK K + ++ MV C
Sbjct: 469 HGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCA 528
Query: 536 PDEKIYDALIKAVADSGMVKEANDLHQRL 564
P+ ++ L++++ + EA L + +
Sbjct: 529 PNLFTFNILLESLCRYRKLDEALGLLEEM 557
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 206/442 (46%)
Query: 125 LQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGG 184
++N +G++ A + E M P S ++ L+ G D+ K+ M G
Sbjct: 83 MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGI 142
Query: 185 VPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVS 244
PDV + + + CK +A+ L+ +MS GC + + Y T++ G +++ E
Sbjct: 143 TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYE 202
Query: 245 FWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTA 304
+ L G L T+ L+ ++C+ ++L+ + G P++ TYN +
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLC 262
Query: 305 KQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRV 364
++G + ++ L+ +G +P+ +TYN LI+ L + + + L M P
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY 322
Query: 365 TYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLL 424
TYN ++ G CK G++ A + V PD TY +L+ GLC EG + + L
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA 382
Query: 425 TGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQL 484
G P ++ YN I GL+ G + A +L +EM KG++P+ T + L G C + +
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCV 442
Query: 485 EEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDAL 544
+A L+K M K + +I G Q K++ A++ LD+M+ + PD Y++L
Sbjct: 443 SDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSL 502
Query: 545 IKAVADSGMVKEANDLHQRLIE 566
+ + + ++ + ++ ++E
Sbjct: 503 LNGLCKTSKFEDVMETYKTMVE 524
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 131/469 (27%), Positives = 229/469 (48%), Gaps = 40/469 (8%)
Query: 141 IEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCK 200
+E + P+ T L+ L K ++ K ++I +MV SG +PD ++ LCK
Sbjct: 94 LESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCK 153
Query: 201 RGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLIT 260
RG + A+ LVE M G + +TYN ++RG+ G+ N+++ F + ++KG P T
Sbjct: 154 RGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFT 213
Query: 261 YTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLL 320
Y+ L+E + G A+++L+++ ++G P++++YN L++ K+G ++ + L
Sbjct: 214 YSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELP 273
Query: 321 SRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLD 380
++G + N V+YN L+ L G W+ + +L M+ P+ VTYNI++N L G +
Sbjct: 274 AKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTE 333
Query: 381 RAISLYSTMV--SESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNI 438
+A+ + M + +YN +++ LCKEG VD ++ L + C P TYN
Sbjct: 334 QALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA 393
Query: 439 -----------------------------------AIDGLARMGSMESAKELYSEMIGKG 463
I L R G+ +A +L EM G
Sbjct: 394 IGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCG 453
Query: 464 IVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTA--YRCVILGLCKQRKVDI 521
PD T+S+L G C AME+L M ++ E K T + +ILGLCK R+ D+
Sbjct: 454 FDPDAHTYSALIRGLCLEGMFTGAMEVLSIM-EESENCKPTVDNFNAMILGLCKIRRTDL 512
Query: 522 AIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKIL 570
A++ ++MV + P+E Y L++ +A ++ A ++ L K++
Sbjct: 513 AMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVI 561
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 161/332 (48%), Gaps = 2/332 (0%)
Query: 235 DKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDII 294
D+ N +++ S + + G P + T L+ +C+ +A+ V+E M G PD
Sbjct: 83 DEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDAS 142
Query: 295 TYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIM 354
Y LV+ K+G ++ + G N VTYN L+ L G + +E +
Sbjct: 143 AYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERL 202
Query: 355 NETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFV 414
+ P TY+ +L K D A+ L ++ + P++V+YN LL+G CKEG
Sbjct: 203 MQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRT 262
Query: 415 DEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSL 474
D+ + L L +V+YNI + L G E A L +EM G P +T++ L
Sbjct: 263 DDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNIL 322
Query: 475 AWGFCGVDQLEEAMELLKEMHKKDEKIKHTA--YRCVILGLCKQRKVDIAIQALDLMVRS 532
+ E+A+++LKEM K + + + TA Y VI LCK+ KVD+ ++ LD M+
Sbjct: 323 INSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYR 382
Query: 533 RCKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
RCKP+E Y+A+ + V+EA + Q L
Sbjct: 383 RCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSL 414
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 190/382 (49%), Gaps = 11/382 (2%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T N +++ LC G L + + +E + +K P+ + + L+ K D+ K+++ +
Sbjct: 178 TYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEI 237
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
++ GG P++++ N+++ G CK G A+ L ++ G + ++YN ++R + G +
Sbjct: 238 IVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRW 297
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIIT---Y 296
EA S + P ++TY +LI + + +AL+VL++M+ +G + +T Y
Sbjct: 298 EEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMS-KGNHQFRVTATSY 356
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
N +++ K+G + + ++ R +PN TYN I SL H V + I+
Sbjct: 357 NPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA-IGSLCEHN--SKVQEAFYIIQS 413
Query: 357 TSSPP---TRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
S+ T Y ++ LC+ G A L M PD TY+ L+ GLC EG
Sbjct: 414 LSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGM 473
Query: 414 VDEGIQLLYLLTGT-NCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHS 472
+++L ++ + NC P + +N I GL ++ + A E++ M+ K +P+E T++
Sbjct: 474 FTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYA 533
Query: 473 SLAWGFCGVDQLEEAMELLKEM 494
L G D+LE A E+L E+
Sbjct: 534 ILVEGIAHEDELELAKEVLDEL 555
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 133/448 (29%), Positives = 211/448 (47%), Gaps = 1/448 (0%)
Query: 119 FTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINI 178
+T NK++ C G + A + + + P F + T+LI G + +D K+ N
Sbjct: 219 YTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNE 278
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN 238
M + G + + +I GLC + A+DL M C P TY +I+ +
Sbjct: 279 MPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSER 338
Query: 239 FNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNS 298
+EA++ K+ G P + TYTVLI+ +C C +A E+L M +G P++ITYN+
Sbjct: 339 KSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNA 398
Query: 299 LVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETS 358
L++ K+G+ E+ V+ + SR + PN TYN LI + VL M E
Sbjct: 399 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAM-GVLNKMLERK 457
Query: 359 SPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGI 418
P VTYN +++G C+SG D A L S M PD TY +++ LCK V+E
Sbjct: 458 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC 517
Query: 419 QLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGF 478
L L +P +V Y IDG + G ++ A + +M+ K +P+ +T ++L G
Sbjct: 518 DLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL 577
Query: 479 CGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDE 538
C +L+EA L ++M K + + +I L K D A M+ S KPD
Sbjct: 578 CADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDA 637
Query: 539 KIYDALIKAVADSGMVKEANDLHQRLIE 566
Y I+ G + +A D+ ++ E
Sbjct: 638 HTYTTFIQTYCREGRLLDAEDMMAKMRE 665
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 215/444 (48%), Gaps = 1/444 (0%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N +L +L G + ++ M P+ + ++ G K+G +++ + ++ +V
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE 246
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
+G PD T +I G C+R L SA + +M L GC + + Y +I G+ +E
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDE 306
Query: 242 AVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVS 301
A+ + C P + TYTVLI+ +C AL ++++M G P+I TY L+
Sbjct: 307 AMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLID 366
Query: 302 FTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPP 361
Q +E+ ++ +L +G+ PN +TYN LI+ G + DV+E+M P
Sbjct: 367 SLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSP 426
Query: 362 TRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLL 421
TYN ++ G CKS + +A+ + + M+ PD+VTYN+L+ G C+ G D +LL
Sbjct: 427 NTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Query: 422 YLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGV 481
L+ P TY ID L + +E A +L+ + KG+ P+ + +++L G+C
Sbjct: 486 SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKA 545
Query: 482 DQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIY 541
+++EA +L++M K+ + +I GLC K+ A + MV+ +P
Sbjct: 546 GKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTD 605
Query: 542 DALIKAVADSGMVKEANDLHQRLI 565
LI + G A Q+++
Sbjct: 606 TILIHRLLKDGDFDHAYSRFQQML 629
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/487 (26%), Positives = 218/487 (44%), Gaps = 57/487 (11%)
Query: 112 PFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDK 171
P VR T ++++LC R A L++ M P+ + T LI L + +K
Sbjct: 321 PTVR----TYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEK 376
Query: 172 GCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSP---------- 221
+++ M+ G +P+VIT N +I G CKRG ++ AVD+VE M SP
Sbjct: 377 ARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIK 436
Query: 222 ------------------------DAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPY 257
D +TYN++I G GNF+ A +G P
Sbjct: 437 GYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPD 496
Query: 258 LITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVIS 317
TYT +I+ +C+ A ++ + + +G P+++ Y +L+ K G +E +L++
Sbjct: 497 QWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLE 556
Query: 318 NLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSG 377
+LS+ PN++T+N LIH L + G + E M + PT T I+++ L K G
Sbjct: 557 KMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDG 616
Query: 378 LLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYN 437
D A S + M+S PD TY T + C+EG + + ++ + SP L TY+
Sbjct: 617 DFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYS 676
Query: 438 IAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSL-------AWG--------FCGVD 482
I G +G A ++ M G P + T SL +G C +
Sbjct: 677 SLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMS 736
Query: 483 QLEE---AMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSR-CKPDE 538
+ E +ELL++M + +Y +ILG+C+ + +A + D M R+ P E
Sbjct: 737 NMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSE 796
Query: 539 KIYDALI 545
+++AL+
Sbjct: 797 LVFNALL 803
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 201/436 (46%), Gaps = 1/436 (0%)
Query: 115 RNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCK 174
R + ++ LC R+ A L M P + T LI+ L + +
Sbjct: 285 RRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALN 344
Query: 175 IINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMF 234
++ M +G P++ T ++I LC + + A +L+ M G P+ ITYN +I G
Sbjct: 345 LVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYC 404
Query: 235 DKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDII 294
+G +AV + + P TY LI+ C+ +A+ VL M PD++
Sbjct: 405 KRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVV 463
Query: 295 TYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIM 354
TYNSL+ + G ++ Y ++S + RG+ P+ TY ++I SL + D+ + +
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL 523
Query: 355 NETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFV 414
+ P V Y +++G CK+G +D A + M+S++C P+ +T+N L+ GLC +G +
Sbjct: 524 EQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKL 583
Query: 415 DEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSL 474
E L + P + T I I L + G + A + +M+ G PD T+++
Sbjct: 584 KEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTF 643
Query: 475 AWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRC 534
+C +L +A +++ +M + Y +I G + + A L M + C
Sbjct: 644 IQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGC 703
Query: 535 KPDEKIYDALIKAVAD 550
+P + + +LIK + +
Sbjct: 704 EPSQHTFLSLIKHLLE 719
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 185/411 (45%), Gaps = 37/411 (9%)
Query: 156 CTN-LIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDM 214
C N L+ L + G +D+ ++ M+ P++ T N ++ G CK G ++ A V +
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244
Query: 215 SLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGA 274
+G PD TY ++I G + + + A + + KGC + YT LI +C
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 275 IRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTL 334
A+++ M + C+P + TY L
Sbjct: 305 DEAMDLFVKMKDDECFPTV-----------------------------------RTYTVL 329
Query: 335 IHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESC 394
I SL ++++ M ET P TY ++++ LC ++A L M+ +
Sbjct: 330 IKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGL 389
Query: 395 FPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKE 454
P+++TYN L++G CK G +++ + ++ L+ SP TYN I G + ++ A
Sbjct: 390 MPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMG 448
Query: 455 LYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLC 514
+ ++M+ + ++PD +T++SL G C + A LL M+ + Y +I LC
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 508
Query: 515 KQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLI 565
K ++V+ A D + + P+ +Y ALI +G V EA+ + ++++
Sbjct: 509 KSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 120/521 (23%), Positives = 213/521 (40%), Gaps = 90/521 (17%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T N ++ C RG + A ++E+M + P+ + LI+G K + K ++N M
Sbjct: 395 TYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKM 453
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
+ +PDV+T N +I G C+ G SA L+ M+ G PD TY ++I +
Sbjct: 454 LERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRV 513
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
EA + +KG P ++ YT LI+ C+ A +LE M + C P+ +T+N+L
Sbjct: 514 EEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNAL 573
Query: 300 VS-----------------------------------FTAKQGVYEETYLVISNLLSRGM 324
+ K G ++ Y +LS G
Sbjct: 574 IHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGT 633
Query: 325 QPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAIS 384
+P+A TY T I + G +D++ M E P TY+ ++ G G + A
Sbjct: 634 KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFD 693
Query: 385 LYSTMVSESCFPDIVTYNTLLSGLCKEGF------------------VDEGIQLLYLLTG 426
+ M C P T+ +L+ L + + D ++LL +
Sbjct: 694 VLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVE 753
Query: 427 TNCSPGLVTYNIAIDGLARMGSMESAKELYSEMI-GKGIVPDEITHSSLAWGFCGVDQLE 485
+ +P +Y I G+ +G++ A++++ M +GI P E+ ++L C + +
Sbjct: 754 HSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHN 813
Query: 486 EAMELLKEM-------------------HKKDEKIKHT----------------AYRCVI 510
EA +++ +M +KK EK + T A++ +I
Sbjct: 814 EAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIII 873
Query: 511 LGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADS 551
G+ KQ V+ + ++M ++ CK + Y LI+ DS
Sbjct: 874 DGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEGPPDS 914
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 170/410 (41%), Gaps = 69/410 (16%)
Query: 226 YNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMA 285
YNT++ + G +E + + L P + TY ++ C+ A + + +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 286 MEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWD 345
G PD TY SL+ ++ + + V + + +G + N V Y LIH L D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 346 GVDDVL-----------------------------------EIMNETSSPPTRVTYNIML 370
D+ + M ET P TY +++
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 371 NGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCS 430
+ LC ++A L M+ + P+++TYN L++G CK G +++ + ++ L+ S
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 431 PG----------------------------------LVTYNIAIDGLARMGSMESAKELY 456
P +VTYN IDG R G+ +SA L
Sbjct: 426 PNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Query: 457 SEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQ 516
S M +G+VPD+ T++S+ C ++EEA +L + +K Y +I G CK
Sbjct: 486 SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKA 545
Query: 517 RKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
KVD A L+ M+ C P+ ++ALI + G +KEA L +++++
Sbjct: 546 GKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVK 595
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 172/415 (41%), Gaps = 54/415 (13%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D +T ++ +LC R+ A L + + +K P+ T LI G K G++D+ ++
Sbjct: 496 DQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLML 555
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
M+ +P+ +T N +I GLC G LK A L E M G P T +I +
Sbjct: 556 EKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKD 615
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
G+F+ A S ++ L G P TYT I+ CR + A +++ M G PD+ TY
Sbjct: 616 GDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTY 675
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGY------------- 343
+SL+ G + V+ + G +P+ T+ +LI L Y
Sbjct: 676 SSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAM 735
Query: 344 -----WDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMV-SESCFPD 397
+D V ++LE M E S P +Y ++ G+C+ G L A ++ M +E P
Sbjct: 736 SNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPS 795
Query: 398 IVTYNTLLS-----------------------------------GLCKEGFVDEGIQLLY 422
+ +N LLS GL K+G + G +
Sbjct: 796 ELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQ 855
Query: 423 LLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWG 477
L + + I IDG+ + G +E+ EL++ M G T+S L G
Sbjct: 856 NLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 129/275 (46%), Gaps = 1/275 (0%)
Query: 296 YNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMN 355
YN+L++ A+ G+ +E V +L + PN TYN +++ G + + + +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 356 ETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVD 415
E P TY ++ G C+ LD A +++ M + C + V Y L+ GLC +D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 416 EGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLA 475
E + L + C P + TY + I L A L EM GI P+ T++ L
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 476 WGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCK 535
C + E+A ELL +M +K Y +I G CK+ ++ A+ ++LM +
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 536 PDEKIYDALIKAVADSGMVKEANDLHQRLIEWKIL 570
P+ + Y+ LIK S V +A + +++E K+L
Sbjct: 426 PNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVL 459
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 115 RNDGFTN-----NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQI 169
RN+G + N +L C + AA++++ M +P SC LI GL K G+
Sbjct: 788 RNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEK 847
Query: 170 DKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTI 229
++G + ++ G D + ++I G+ K+G +++ +L M +GC + TY+ +
Sbjct: 848 ERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLL 907
Query: 230 IRG 232
I G
Sbjct: 908 IEG 910
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 202 bits (514), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 217/451 (48%)
Query: 123 KILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMS 182
KIL+N + A L M +P T L+ + K+ + D + M +
Sbjct: 53 KILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQIL 112
Query: 183 GGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEA 242
G P + TCN+V+ +C A + M G PD +T+ +++ G +A
Sbjct: 113 GIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDA 172
Query: 243 VSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSF 302
++ + L G P ++TYT LI +C+ A+E+ M G P+++TYN+LV+
Sbjct: 173 IALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTG 232
Query: 303 TAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPT 362
+ G + + ++ +++ R ++PN +T+ LI + G ++ +M + S P
Sbjct: 233 LCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPD 292
Query: 363 RVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLY 422
TY ++NGLC GLLD A ++ M C+P+ V Y TL+ G CK V++G+++ Y
Sbjct: 293 VFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFY 352
Query: 423 LLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVD 482
++ +TY + I G +G + A+E++++M + PD T++ L G C
Sbjct: 353 EMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNG 412
Query: 483 QLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYD 542
++E+A+ + + M K++ I Y +I G+CK KV+ A + KP+ Y
Sbjct: 413 KVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYT 472
Query: 543 ALIKAVADSGMVKEANDLHQRLIEWKILKTE 573
+I G++ EA+ L +++ E L E
Sbjct: 473 TMISGFCRRGLIHEADSLFKKMKEDGFLPNE 503
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 191/389 (49%), Gaps = 2/389 (0%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T N ++ +C + A+ + M + P + T+L+ G +I+ + + +
Sbjct: 120 TCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQI 179
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
+ G P+V+T +I LCK +L AV+L M +G P+ +TYN ++ G+ + G +
Sbjct: 180 LGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRW 239
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
+A +D +++ P +IT+T LI+ + + A E+ M YPD+ TY SL
Sbjct: 240 GDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSL 299
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSL-SSHGYWDGVDDVLEIMNETS 358
++ G+ +E + + G PN V Y TLIH S DG+ E M++
Sbjct: 300 INGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYE-MSQKG 358
Query: 359 SPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGI 418
+TY +++ G C G D A +++ M S PDI TYN LL GLC G V++ +
Sbjct: 359 VVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKAL 418
Query: 419 QLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGF 478
+ + +VTY I I G+ ++G +E A +L+ + KG+ P+ IT++++ GF
Sbjct: 419 MIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGF 478
Query: 479 CGVDQLEEAMELLKEMHKKDEKIKHTAYR 507
C + EA L K+M + + Y+
Sbjct: 479 CRRGLIHEADSLFKKMKEDGFLPNESVYK 507
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 193/426 (45%), Gaps = 1/426 (0%)
Query: 150 IPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVD 209
I F S ++R + Q + + MV S +P +I ++ + K +
Sbjct: 45 IRAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVIS 104
Query: 210 LVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVC 269
L E M + G P T N ++ + A F ++ G P L+T+T L+ C
Sbjct: 105 LFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYC 164
Query: 270 RYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAV 329
+ A+ + + + G P+++TY +L+ K + + + + G +PN V
Sbjct: 165 HWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVV 224
Query: 330 TYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTM 389
TYN L+ L G W +L M + P +T+ +++ K G L A LY+ M
Sbjct: 225 TYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVM 284
Query: 390 VSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSM 449
+ S +PD+ TY +L++GLC G +DE Q+ YL+ C P V Y I G + +
Sbjct: 285 IQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRV 344
Query: 450 ESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCV 509
E +++ EM KG+V + IT++ L G+C V + + A E+ +M + Y +
Sbjct: 345 EDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVL 404
Query: 510 ILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKI 569
+ GLC KV+ A+ + M + + Y +I+ + G V++A DL L K
Sbjct: 405 LDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFS-KG 463
Query: 570 LKTEII 575
+K +I
Sbjct: 464 MKPNVI 469
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 162/352 (46%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T +L C R+ A L + + P+ + T LIR L K ++ ++
Sbjct: 152 DLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELF 211
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
N M +G P+V+T N ++ GLC+ G A L+ DM P+ IT+ +I
Sbjct: 212 NQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKV 271
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
G EA + ++ P + TY LI +C Y A ++ M GCYP+ + Y
Sbjct: 272 GKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIY 331
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
+L+ K E+ + + +G+ N +TY LI G D +V M+
Sbjct: 332 TTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSS 391
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDE 416
+PP TYN++L+GLC +G +++A+ ++ M +IVTY ++ G+CK G V++
Sbjct: 392 RRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVED 451
Query: 417 GIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDE 468
L L P ++TY I G R G + A L+ +M G +P+E
Sbjct: 452 AFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNE 503
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 102/218 (46%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
V D FT ++ LC G L A ++ +M R P+ T LI G K +++ G
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM 348
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
KI M G V + IT ++I G C G A ++ MS PD TYN ++ G+
Sbjct: 349 KIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL 408
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
G +A+ ++ ++ ++TYT++I+ +C+ A ++ + +G P++
Sbjct: 409 CCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNV 468
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTY 331
ITY +++S ++G+ E + + G PN Y
Sbjct: 469 ITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 128/448 (28%), Positives = 206/448 (45%), Gaps = 24/448 (5%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T N +L LC R+ A L M T + + Q
Sbjct: 175 DVVTFNTLLHGLCLEDRISEALALFGYMVE----------TGFLEAVALFDQ-------- 216
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
MV G P VIT N +I GLC G + A LV M G D +TY TI+ GM
Sbjct: 217 --MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKM 274
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
G+ A++ P ++ Y+ +I+ +C+ A + +M +G P++ TY
Sbjct: 275 GDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTY 334
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
N ++ G + + ++ +++ R + P+ +T+N LI + G + + + M
Sbjct: 335 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 394
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDE 416
P VTYN M+ G CK D A ++ M S PD+VT+NT++ C+ VDE
Sbjct: 395 RCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDE 450
Query: 417 GIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAW 476
G+QLL ++ TYN I G + ++ +A++L+ EMI G+ PD IT + L +
Sbjct: 451 GMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLY 510
Query: 477 GFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKP 536
GFC ++LEEA+EL + + + AY +I G+CK KVD A + +P
Sbjct: 511 GFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEP 570
Query: 537 DEKIYDALIKAVADSGMVKEANDLHQRL 564
D + Y+ +I + +AN L ++
Sbjct: 571 DVQTYNVMISGFCGKSAISDANVLFHKM 598
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 103/442 (23%), Positives = 192/442 (43%), Gaps = 21/442 (4%)
Query: 137 AARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIG 196
A + M R C +I +++ + D + M + ++ + N++I
Sbjct: 90 AIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIK 149
Query: 197 GLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRG----------------MFDKGNFN 240
C L ++ ++ G PD +T+NT++ G M + G F
Sbjct: 150 CFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG-FL 208
Query: 241 EAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLV 300
EAV+ + + G P +IT+ LI +C + A ++ M +G + D++TY ++V
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 301 SFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSP 360
+ K G + ++S + ++P+ V Y+ +I L G+ + M E
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 361 PTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQL 420
P TYN M++G C G A L M+ PD++T+N L+S KEG + E +L
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 421 LYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCG 480
+ P VTYN I G + + AK ++ M PD +T +++ +C
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCR 444
Query: 481 VDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKI 540
+++E M+LL+E+ ++ T Y +I G C+ ++ A M+ PD
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504
Query: 541 YDALIKAVADSGMVKEANDLHQ 562
+ L+ ++ ++EA +L +
Sbjct: 505 CNILLYGFCENEKLEEALELFE 526
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 165/364 (45%), Gaps = 18/364 (4%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
++ D + I+ LC G A L M K P+ + +I G G+
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
+++ M+ PDV+T N +I K G L A L ++M PD +TYN++I G
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
F++A K P ++T+ +I++ CR +++L +++ G +
Sbjct: 412 CKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467
Query: 294 ITYNSLV-------SFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDG 346
TYN+L+ + A Q +++E ++S G+ P+ +T N L++ + +
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQE-------MISHGVCPDTITCNILLYGFCENEKLEE 520
Query: 347 VDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLS 406
++ E++ + V YNI+++G+CK +D A L+ ++ PD+ TYN ++S
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 580
Query: 407 GLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVP 466
G C + + + L + + P TYN I G + G ++ + EL SEM G
Sbjct: 581 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSG 640
Query: 467 DEIT 470
D T
Sbjct: 641 DAFT 644
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 100/225 (44%), Gaps = 15/225 (6%)
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQ 419
P ++NI++ C L ++S + + PD+VT+NTLL GLC E + E +
Sbjct: 138 PLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALA 197
Query: 420 LLYLLTGTN---------------CSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGI 464
L + T +P ++T+N I+GL G + A L ++M+GKG+
Sbjct: 198 LFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGL 257
Query: 465 VPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQ 524
D +T+ ++ G C + + A+ LL +M + K Y +I LCK A
Sbjct: 258 HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQY 317
Query: 525 ALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKI 569
M+ P+ Y+ +I G +A L + +IE +I
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI 362
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 128/448 (28%), Positives = 206/448 (45%), Gaps = 24/448 (5%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T N +L LC R+ A L M T + + Q
Sbjct: 175 DVVTFNTLLHGLCLEDRISEALALFGYMVE----------TGFLEAVALFDQ-------- 216
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
MV G P VIT N +I GLC G + A LV M G D +TY TI+ GM
Sbjct: 217 --MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKM 274
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
G+ A++ P ++ Y+ +I+ +C+ A + +M +G P++ TY
Sbjct: 275 GDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTY 334
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
N ++ G + + ++ +++ R + P+ +T+N LI + G + + + M
Sbjct: 335 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 394
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDE 416
P VTYN M+ G CK D A ++ M S PD+VT+NT++ C+ VDE
Sbjct: 395 RCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDE 450
Query: 417 GIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAW 476
G+QLL ++ TYN I G + ++ +A++L+ EMI G+ PD IT + L +
Sbjct: 451 GMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLY 510
Query: 477 GFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKP 536
GFC ++LEEA+EL + + + AY +I G+CK KVD A + +P
Sbjct: 511 GFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEP 570
Query: 537 DEKIYDALIKAVADSGMVKEANDLHQRL 564
D + Y+ +I + +AN L ++
Sbjct: 571 DVQTYNVMISGFCGKSAISDANVLFHKM 598
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/449 (23%), Positives = 195/449 (43%), Gaps = 21/449 (4%)
Query: 137 AARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIG 196
A + M R C +I +++ + D + M + ++ + N++I
Sbjct: 90 AIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIK 149
Query: 197 GLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRG----------------MFDKGNFN 240
C L ++ ++ G PD +T+NT++ G M + G F
Sbjct: 150 CFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG-FL 208
Query: 241 EAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLV 300
EAV+ + + G P +IT+ LI +C + A ++ M +G + D++TY ++V
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 301 SFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSP 360
+ K G + ++S + ++P+ V Y+ +I L G+ + M E
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 361 PTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQL 420
P TYN M++G C G A L M+ PD++T+N L+S KEG + E +L
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 421 LYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCG 480
+ P VTYN I G + + AK ++ M PD +T +++ +C
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCR 444
Query: 481 VDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKI 540
+++E M+LL+E+ ++ T Y +I G C+ ++ A M+ PD
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504
Query: 541 YDALIKAVADSGMVKEANDLHQRLIEWKI 569
+ L+ ++ ++EA +L + + KI
Sbjct: 505 CNILLYGFCENEKLEEALELFEVIQMSKI 533
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 165/364 (45%), Gaps = 18/364 (4%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
++ D + I+ LC G A L M K P+ + +I G G+
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
+++ M+ PDV+T N +I K G L A L ++M PD +TYN++I G
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
F++A K P ++T+ +I++ CR +++L +++ G +
Sbjct: 412 CKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467
Query: 294 ITYNSLV-------SFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDG 346
TYN+L+ + A Q +++E ++S G+ P+ +T N L++ + +
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQE-------MISHGVCPDTITCNILLYGFCENEKLEE 520
Query: 347 VDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLS 406
++ E++ + V YNI+++G+CK +D A L+ ++ PD+ TYN ++S
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 580
Query: 407 GLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVP 466
G C + + + L + + P TYN I G + G ++ + EL SEM G
Sbjct: 581 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSG 640
Query: 467 DEIT 470
D T
Sbjct: 641 DAFT 644
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 119/463 (25%), Positives = 227/463 (49%), Gaps = 4/463 (0%)
Query: 115 RNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSC-TNLIRGLIKIGQIDKGC 173
R+D +L+ L ++ +L +R + ++ ++ I P + ++ + GQ+
Sbjct: 204 RHDPMVYYSMLEVL-SKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDAL 262
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
K++ +M +G P+++ CN I + L+ A+ +E M + G P+ +TYN +IRG
Sbjct: 263 KVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGY 322
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAME-GCYPD 292
D EA+ +D KGC P ++Y ++ +C+ + ++++ MA E G PD
Sbjct: 323 CDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPD 382
Query: 293 IITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVL- 351
+TYN+L+ K +E + + +G + + + Y+ ++H+L G D++
Sbjct: 383 QVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLIN 442
Query: 352 EIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKE 411
E++++ PP VTY ++NG C+ G +D+A L M + P+ V+Y LL+G+C+
Sbjct: 443 EMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRT 502
Query: 412 GFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITH 471
G E +++ + SP +TY++ + GL R G + A ++ EM+ KG P +
Sbjct: 503 GKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEI 562
Query: 472 SSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVR 531
+ L C + EA + ++E K I + VI G C+ ++D A+ LD M
Sbjct: 563 NLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYL 622
Query: 532 SRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKILKTEI 574
D Y L+ + G + EA +L ++++ I T +
Sbjct: 623 INKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPV 665
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 212/458 (46%), Gaps = 39/458 (8%)
Query: 133 RLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCN 192
RL A R +E M +P+ + +IRG + ++++ +++ M G +PD ++
Sbjct: 292 RLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYY 351
Query: 193 MVIGGLCKRGYLKSAVDLVEDMSLS-GCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLR 251
++G LCK + DL++ M+ G PD +TYNT+I + + +EA+ F KD
Sbjct: 352 TIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQE 411
Query: 252 KG------------------------------------CPPYLITYTVLIELVCRYCGAI 275
KG CPP ++TYT ++ CR
Sbjct: 412 KGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVD 471
Query: 276 RALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLI 335
+A ++L+ M G P+ ++Y +L++ + G E +++ PN++TY+ ++
Sbjct: 472 KAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIM 531
Query: 336 HSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCF 395
H L G DV+ M P V N++L LC+ G A +++ C
Sbjct: 532 HGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCA 591
Query: 396 PDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKEL 455
++V + T++ G C+ +D + +L + N + TY +D L + G + A EL
Sbjct: 592 INVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATEL 651
Query: 456 YSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCK 515
+M+ KGI P +T+ ++ +C + ++++ + +L++M + +K + T Y VI LC
Sbjct: 652 MKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISR-QKCR-TIYNQVIEKLCV 709
Query: 516 QRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGM 553
K++ A L ++R+ + D K AL++ G+
Sbjct: 710 LGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGV 747
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 164/353 (46%), Gaps = 6/353 (1%)
Query: 111 PPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQID 170
PP D T ++ C G + A +L+++M P+ S T L+ G+ + G+
Sbjct: 451 PP----DVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSL 506
Query: 171 KGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTII 230
+ +++N+ P+ IT ++++ GL + G L A D+V +M L G P + N ++
Sbjct: 507 EAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLL 566
Query: 231 RGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCY 290
+ + G +EA F ++ L KGC ++ +T +I C+ AL VL+DM + +
Sbjct: 567 QSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKH 626
Query: 291 PDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDV 350
D+ TY +LV K+G E ++ +L +G+ P VTY T+IH G D + +
Sbjct: 627 ADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAI 686
Query: 351 LEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCK 410
LE M S R YN ++ LC G L+ A +L ++ + D T L+ G K
Sbjct: 687 LEKM--ISRQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLK 744
Query: 411 EGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKG 463
+G ++ + N P + L G ++ A +L ++ +G
Sbjct: 745 KGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERG 797
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 168/354 (47%), Gaps = 3/354 (0%)
Query: 115 RNDGFTNNKILQNLCTRGRLMAAARLI-EIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
R D + I+ LC GR+ A LI E++++ P + T ++ G ++G++DK
Sbjct: 415 RIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAK 474
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
K++ +M G P+ ++ ++ G+C+ G A +++ SP++ITY+ I+ G+
Sbjct: 475 KLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGL 534
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
+G +EA ++ + KG P + +L++ +CR A + +E+ +GC ++
Sbjct: 535 RREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINV 594
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
+ + +++ + + V+ ++ + TY TL+ +L G ++++
Sbjct: 595 VNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKK 654
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
M PT VTY +++ C+ G +D +++ M+S I YN ++ LC G
Sbjct: 655 MLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI--YNQVIEKLCVLGK 712
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPD 467
++E LL + T T ++G + G SA ++ M + ++PD
Sbjct: 713 LEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPD 766
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 209/433 (48%)
Query: 133 RLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCN 192
+L A ++ K +C LI L++IG ++ + + SG +V T N
Sbjct: 180 KLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLN 239
Query: 193 MVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRK 252
+++ LCK G ++ + + G PD +TYNT+I KG EA K
Sbjct: 240 IMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGK 299
Query: 253 GCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEET 312
G P + TY +I +C++ RA EV +M G PD TY SL+ K+G ET
Sbjct: 300 GFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVET 359
Query: 313 YLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNG 372
V S++ SR + P+ V +++++ + G D + E P V Y I++ G
Sbjct: 360 EKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQG 419
Query: 373 LCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPG 432
C+ G++ A++L + M+ + C D+VTYNT+L GLCK + E +L +T P
Sbjct: 420 YCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPD 479
Query: 433 LVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLK 492
T I IDG ++G++++A EL+ +M K I D +T+++L GF V ++ A E+
Sbjct: 480 SYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWA 539
Query: 493 EMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSG 552
+M K+ +Y ++ LC + + A + D M+ KP I +++IK SG
Sbjct: 540 DMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSG 599
Query: 553 MVKEANDLHQRLI 565
+ +++I
Sbjct: 600 NASDGESFLEKMI 612
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/485 (24%), Positives = 218/485 (44%), Gaps = 37/485 (7%)
Query: 119 FTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINI 178
+T N ++ LC G++ + + K P + LI G +++ +++N
Sbjct: 236 YTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNA 295
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIR------- 231
M G P V T N VI GLCK G + A ++ +M SG SPD+ TY +++
Sbjct: 296 MPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGD 355
Query: 232 ---------------------------GMFDK-GNFNEAVSFWKDQLRKGCPPYLITYTV 263
+F + GN ++A+ ++ G P + YT+
Sbjct: 356 VVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTI 415
Query: 264 LIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRG 323
LI+ CR A+ + +M +GC D++TYN+++ K+ + E + + + R
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERA 475
Query: 324 MQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAI 383
+ P++ T LI G ++ + M E VTYN +L+G K G +D A
Sbjct: 476 LFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAK 535
Query: 384 SLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGL 443
+++ MVS+ P ++Y+ L++ LC +G + E ++ + N P ++ N I G
Sbjct: 536 EIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGY 595
Query: 444 ARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKI-- 501
R G+ + +MI +G VPD I++++L +GF + + +A L+K+M ++ +
Sbjct: 596 CRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVP 655
Query: 502 KHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLH 561
Y ++ G C+Q ++ A L M+ PD Y +I + EA +H
Sbjct: 656 DVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIH 715
Query: 562 QRLIE 566
+++
Sbjct: 716 DEMLQ 720
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 117/481 (24%), Positives = 215/481 (44%), Gaps = 17/481 (3%)
Query: 112 PFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPH----------FPSCTN--- 158
P ++ + + ++ L GRL A + M R+S + F +C +
Sbjct: 107 PNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDS 166
Query: 159 ----LIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDM 214
LIR ++ ++ + + ++ G + CN +IG L + G+++ A + +++
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 215 SLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGA 274
S SG + T N ++ + G + +F KG P ++TY LI
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 275 IRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTL 334
A E++ M +G P + TYN++++ K G YE V + +L G+ P++ TY +L
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 335 IHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESC 394
+ G + V M P V ++ M++ +SG LD+A+ ++++
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 406
Query: 395 FPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKE 454
PD V Y L+ G C++G + + L + C+ +VTYN + GL + + A +
Sbjct: 407 IPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADK 466
Query: 455 LYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLC 514
L++EM + + PD T + L G C + L+ AMEL ++M +K ++ Y ++ G
Sbjct: 467 LFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFG 526
Query: 515 KQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKILKTEI 574
K +D A + MV P Y L+ A+ G + EA + +I I T +
Sbjct: 527 KVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVM 586
Query: 575 I 575
I
Sbjct: 587 I 587
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/448 (25%), Positives = 209/448 (46%), Gaps = 10/448 (2%)
Query: 97 ESGELVD--PGKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFP 154
E+ EL++ PGK P + T N ++ LC G+ A + M R P
Sbjct: 288 EAFELMNAMPGKGFSPGVY------TYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341
Query: 155 SCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDM 214
+ +L+ K G + + K+ + M VPD++ + ++ + G L A+ +
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401
Query: 215 SLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGA 274
+G PD + Y +I+G KG + A++ + L++GC ++TY ++ +C+
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461
Query: 275 IRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTL 334
A ++ +M +PD T L+ K G + + + + ++ + VTYNTL
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTL 521
Query: 335 IHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESC 394
+ G D ++ M PT ++Y+I++N LC G L A ++ M+S++
Sbjct: 522 LDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581
Query: 395 FPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKE 454
P ++ N+++ G C+ G +G L + P ++YN I G R +M A
Sbjct: 582 KPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFG 641
Query: 455 LYSEMIGK--GIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILG 512
L +M + G+VPD T++S+ GFC +Q++EA +L++M ++ + Y C+I G
Sbjct: 642 LVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMING 701
Query: 513 LCKQRKVDIAIQALDLMVRSRCKPDEKI 540
Q + A + D M++ PD+K
Sbjct: 702 FVSQDNLTEAFRIHDEMLQRGFSPDDKF 729
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 126/457 (27%), Positives = 223/457 (48%), Gaps = 9/457 (1%)
Query: 109 KPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQ 168
K PP + FT +++ C + +A L+ M + +P+ LI L K +
Sbjct: 212 KIPPTL----FTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNR 267
Query: 169 IDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNT 228
+++ +++ M + G VPD T N VI GLCK + A +V M + G +PD ITY
Sbjct: 268 VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGY 327
Query: 229 IIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAME- 287
++ G+ G + A KD + P ++ + LI + A VL DM
Sbjct: 328 LMNGLCKIGRVDAA----KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 383
Query: 288 GCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGV 347
G PD+ TYNSL+ K+G+ V+ ++ ++G +PN +Y L+ G D
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 443
Query: 348 DDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSG 407
+VL M+ P V +N +++ CK + A+ ++ M + C PD+ T+N+L+SG
Sbjct: 444 YNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 503
Query: 408 LCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPD 467
LC+ + + LL + VTYN I+ R G ++ A++L +EM+ +G D
Sbjct: 504 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLD 563
Query: 468 EITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALD 527
EIT++SL G C ++++A L ++M + + + +I GLC+ V+ A++
Sbjct: 564 EITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQK 623
Query: 528 LMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
MV PD +++LI + +G +++ + ++L
Sbjct: 624 EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKL 660
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 202/405 (49%), Gaps = 5/405 (1%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T ++ LC GR+ AA L + + P LI G + G++D ++
Sbjct: 321 DDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVL 376
Query: 177 NIMVMSGG-VPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFD 235
+ MV S G VPDV T N +I G K G + A++++ DM GC P+ +Y ++ G
Sbjct: 377 SDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCK 436
Query: 236 KGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIIT 295
G +EA + + G P + + LI C+ A+E+ +M +GC PD+ T
Sbjct: 437 LGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496
Query: 296 YNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMN 355
+NSL+S + + ++ +++S G+ N VTYNTLI++ G ++ M
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556
Query: 356 ETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVD 415
SP +TYN ++ GLC++G +D+A SL+ M+ + P ++ N L++GLC+ G V+
Sbjct: 557 FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVE 616
Query: 416 EGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLA 475
E ++ + +P +VT+N I+GL R G +E ++ ++ +GI PD +T ++L
Sbjct: 617 EAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Query: 476 WGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVD 520
C + +A LL E + H + ++ + Q +D
Sbjct: 677 SWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLD 721
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 138/544 (25%), Positives = 252/544 (46%), Gaps = 28/544 (5%)
Query: 30 SGAGSNHSLRKKSSTLPQISSNDCFSTNKSCLAQRRLQCRSFQGSAVIDRVNEVDHEDWG 89
S G HS + ++ +N F T L Q + + F+ S I + + D +
Sbjct: 103 SQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGF- 161
Query: 90 LESFERRESGELVDPGKPVKPPPFVRN-----DGFTNNKILQNLCTRGRL--MAAARLIE 142
PG+ + +RN F + ++ + G +AA +
Sbjct: 162 --------------PGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYD 207
Query: 143 IMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRG 202
+++RK P + +++ + +ID ++ M G VP+ + +I L K
Sbjct: 208 MLSRKIP-PTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCN 266
Query: 203 YLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYT 262
+ A+ L+E+M L GC PDA T+N +I G+ NEA L +G P ITY
Sbjct: 267 RVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYG 326
Query: 263 VLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLL-S 321
L+ +C+ I ++ +D+ P+I+ +N+L+ G ++ V+S+++ S
Sbjct: 327 YLMNGLCK----IGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTS 382
Query: 322 RGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDR 381
G+ P+ TYN+LI+ G +VL M P +Y I+++G CK G +D
Sbjct: 383 YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDE 442
Query: 382 AISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAID 441
A ++ + M ++ P+ V +N L+S CKE + E +++ + C P + T+N I
Sbjct: 443 AYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS 502
Query: 442 GLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKI 501
GL + ++ A L +MI +G+V + +T+++L F +++EA +L+ EM + +
Sbjct: 503 GLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPL 562
Query: 502 KHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLH 561
Y +I GLC+ +VD A + M+R P + LI + SGMV+EA +
Sbjct: 563 DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQ 622
Query: 562 QRLI 565
+ ++
Sbjct: 623 KEMV 626
Score = 191 bits (486), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 218/462 (47%), Gaps = 14/462 (3%)
Query: 124 ILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSG 183
++ +L R+ A +L+E M +P + ++I GL K +I++ K++N M++ G
Sbjct: 258 LIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRG 317
Query: 184 GVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAV 243
PD IT ++ GLCK G + +A DL + P+ + +NT+I G G ++A
Sbjct: 318 FAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAK 373
Query: 244 SFWKDQLRK-GCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSF 302
+ D + G P + TY LI + ALEVL DM +GC P++ +Y LV
Sbjct: 374 AVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDG 433
Query: 303 TAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPT 362
K G +E Y V++ + + G++PN V +N LI + ++ M P
Sbjct: 434 FCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPD 493
Query: 363 RVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLY 422
T+N +++GLC+ + A+ L M+SE + VTYNTL++ + G + E +L+
Sbjct: 494 VYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVN 553
Query: 423 LLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVD 482
+ +TYN I GL R G ++ A+ L+ +M+ G P I+ + L G C
Sbjct: 554 EMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSG 613
Query: 483 QLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYD 542
+EEA+E KEM + + +I GLC+ +++ + + PD ++
Sbjct: 614 MVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFN 673
Query: 543 ALIKAVADSGMVKEANDLHQRLIE---------WKILKTEII 575
L+ + G V +A L IE W IL II
Sbjct: 674 TLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSII 715
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 208/438 (47%), Gaps = 15/438 (3%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T N ++ LC R+ AA+++ M + P + L+ GL KIG++D +
Sbjct: 286 DAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF 345
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLS-GCSPDAITYNTIIRGMFD 235
+ P+++ N +I G G L A ++ DM S G PD TYN++I G +
Sbjct: 346 YRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK 401
Query: 236 KGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIIT 295
+G A+ D KGC P + +YT+L++ C+ A VL +M+ +G P+ +
Sbjct: 402 EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVG 461
Query: 296 YNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSS-----HGYWDGVDDV 350
+N L+S K+ E + + +G +P+ T+N+LI L H W +
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALW-----L 516
Query: 351 LEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCK 410
L M VTYN ++N + G + A L + MV + D +TYN+L+ GLC+
Sbjct: 517 LRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCR 576
Query: 411 EGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEIT 470
G VD+ L + +P ++ NI I+GL R G +E A E EM+ +G PD +T
Sbjct: 577 AGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVT 636
Query: 471 HSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMV 530
+SL G C ++E+ + + +++ + + ++ LCK V A LD +
Sbjct: 637 FNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGI 696
Query: 531 RSRCKPDEKIYDALIKAV 548
P+ + + L++++
Sbjct: 697 EDGFVPNHRTWSILLQSI 714
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 198 bits (504), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 115/441 (26%), Positives = 219/441 (49%)
Query: 133 RLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCN 192
+L A L M + P L+ ++K+ + D + M + G D+ T N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 193 MVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRK 252
+VI C + A+ ++ M G PD +T +++ G + ++AVS +
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 253 GCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEET 312
G P ++ Y +I+ +C+ A + +++ +G P+++TY +LV+ + +
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 313 YLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNG 372
++S+++ + + PN +TY+ L+ + +G ++ E M S P VTY+ ++NG
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 373 LCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPG 432
LC +D A ++ MVS+ C D+V+YNTL++G CK V++G++L ++
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 433 LVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLK 492
VTYN I G + G ++ A+E +S+M GI PD T++ L G C +LE+A+ + +
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424
Query: 493 EMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSG 552
+M K++ + Y VI G+CK KV+ A + KPD Y ++ + G
Sbjct: 425 DMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
Query: 553 MVKEANDLHQRLIEWKILKTE 573
++ E L+ ++ + ++K +
Sbjct: 485 LLHEVEALYTKMKQEGLMKND 505
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 190/387 (49%), Gaps = 6/387 (1%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
+RND +T N ++ C ++ A ++ M + P + +L+ G + ++
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
+++ MV G PD++ N +I LCK + A D +++ G P+ +TY ++ G+
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
+ +++A D ++K P +ITY+ L++ + + A E+ E+M PDI
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
+TY+SL++ +E + ++S+G + V+YNTLI+ V+D +++
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKR---VEDGMKL 352
Query: 354 MNETSSP---PTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCK 410
E S VTYN ++ G ++G +D+A +S M PDI TYN LL GLC
Sbjct: 353 FREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCD 412
Query: 411 EGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEIT 470
G +++ + + + +VTY I G+ + G +E A L+ + KG+ PD +T
Sbjct: 413 NGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVT 472
Query: 471 HSSLAWGFCGVDQLEEAMELLKEMHKK 497
++++ G C L E L +M ++
Sbjct: 473 YTTMMSGLCTKGLLHEVEALYTKMKQE 499
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 195/374 (52%)
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN 238
M+ G PD++T N ++ G C + AV LV+ M G PD +T+ T+I G+F
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNK 198
Query: 239 FNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNS 298
+EAV+ +++GC P L+TY ++ +C+ AL +L M +++ Y++
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258
Query: 299 LVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETS 358
++ K ++ + + + ++G++PN +TY++LI L ++G W +L M E
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK 318
Query: 359 SPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGI 418
P VT++ +++ K G L +A LY M+ S P+I TY++L++G C + E
Sbjct: 319 INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAK 378
Query: 419 QLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGF 478
Q+L L+ +C P +VTYN I+G + ++ EL+ EM +G+V + +T+++L GF
Sbjct: 379 QMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGF 438
Query: 479 CGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDE 538
+ A + K+M Y ++ GLCK K+ A+ + + RS +PD
Sbjct: 439 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDI 498
Query: 539 KIYDALIKAVADSG 552
Y+ +I+ + +G
Sbjct: 499 YTYNIMIEGMCKAG 512
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 185/368 (50%)
Query: 151 PHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDL 210
P + +L+ G +I +++ MV G PD +T +I GL AV L
Sbjct: 146 PDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVAL 205
Query: 211 VEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCR 270
++ M GC PD +TY ++ G+ +G+ + A++ ++ Y+ +I+ +C+
Sbjct: 206 IDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCK 265
Query: 271 YCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVT 330
Y AL + +M +G P++ITY+SL+S G + + ++S+++ R + PN VT
Sbjct: 266 YRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVT 325
Query: 331 YNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMV 390
++ LI + G + + E M + S P TY+ ++NG C L A + M+
Sbjct: 326 FSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMI 385
Query: 391 SESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSME 450
+ C P++VTYNTL++G CK VD+G++L ++ VTY I G + +
Sbjct: 386 RKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 445
Query: 451 SAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVI 510
+A+ ++ +M+ G+ P+ +T++ L G C +L +AM + + + + + Y +I
Sbjct: 446 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 505
Query: 511 LGLCKQRK 518
G+CK K
Sbjct: 506 EGMCKAGK 513
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 173/363 (47%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T N +L C R+ A L++ M P + T LI GL + + +I
Sbjct: 147 DIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALI 206
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
+ MV G PD++T V+ GLCKRG A++L+ M + + + Y+T+I +
Sbjct: 207 DRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKY 266
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
+ ++A++ + + KG P +ITY+ LI +C Y A +L DM P+++T+
Sbjct: 267 RHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTF 326
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
++L+ K+G + + ++ R + PN TY++LI+ +LE+M
Sbjct: 327 SALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIR 386
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDE 416
P VTYN ++NG CK+ +D+ + L+ M + VTY TL+ G + D
Sbjct: 387 KDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 446
Query: 417 GIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAW 476
+ + P ++TYNI +DGL + G + A ++ + + PD T++ +
Sbjct: 447 AQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIE 506
Query: 477 GFC 479
G C
Sbjct: 507 GMC 509
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 181/378 (47%)
Query: 168 QIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYN 227
++D + +M S P +I + ++ + K + E M + G S + TYN
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 228 TIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAME 287
+I + A++ ++ G P ++T L+ C A+ +++ M
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 288 GCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGV 347
G PD +T+ +L+ E +I ++ RG QP+ VTY +++ L G D
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 348 DDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSG 407
++L M V Y+ +++ LCK D A++L++ M ++ P+++TY++L+S
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 408 LCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPD 467
LC G + +LL + +P LVT++ ID + G + A++LY EMI + I P+
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357
Query: 468 EITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALD 527
T+SSL GFC +D+L EA ++L+ M +KD Y +I G CK ++VD ++
Sbjct: 358 IFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFR 417
Query: 528 LMVRSRCKPDEKIYDALI 545
M + + Y LI
Sbjct: 418 EMSQRGLVGNTVTYTTLI 435
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 164/392 (41%), Gaps = 41/392 (10%)
Query: 214 MSLSGCSPDAIT------YNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIEL 267
+S S C A + Y ++R ++A+ + + P +I ++ L+
Sbjct: 28 LSFSFCRRRAFSGKTSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSA 87
Query: 268 VCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPN 327
+ + + E M + G ++ TYN L++ + ++ ++ G +P+
Sbjct: 88 IAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPD 147
Query: 328 AVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYS 387
VT N+L++ +++ M E P VT+ +++GL A++L
Sbjct: 148 IVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALID 207
Query: 388 TMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMG 447
MV C PD+VTY +++GLCK G D + LL + +V Y+ ID L +
Sbjct: 208 RMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYR 267
Query: 448 SMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKK---------- 497
+ A L++EM KG+ P+ IT+SSL C + +A LL +M ++
Sbjct: 268 HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFS 327
Query: 498 -------------------DEKIKHT------AYRCVILGLCKQRKVDIAIQALDLMVRS 532
+E IK + Y +I G C ++ A Q L+LM+R
Sbjct: 328 ALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRK 387
Query: 533 RCKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
C P+ Y+ LI + V + +L + +
Sbjct: 388 DCLPNVVTYNTLINGFCKAKRVDKGMELFREM 419
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 124/271 (45%), Gaps = 13/271 (4%)
Query: 74 SAVIDRVNEVDHEDWGLESFERRESGELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGR 133
S VID + + HED L F E+ K V+P + T + ++ LC GR
Sbjct: 257 STVIDSLCKYRHEDDALNLFTEMEN-------KGVRP------NVITYSSLISCLCNYGR 303
Query: 134 LMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNM 193
A+RL+ M + P+ + + LI +K G++ K K+ M+ P++ T +
Sbjct: 304 WSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSS 363
Query: 194 VIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKG 253
+I G C L A ++E M C P+ +TYNT+I G ++ + +++ ++G
Sbjct: 364 LINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRG 423
Query: 254 CPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETY 313
+TYT LI + A V + M G +P+I+TYN L+ K G +
Sbjct: 424 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM 483
Query: 314 LVISNLLSRGMQPNAVTYNTLIHSLSSHGYW 344
+V L M+P+ TYN +I + G W
Sbjct: 484 VVFEYLQRSTMEPDIYTYNIMIEGMCKAGKW 514
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 129/289 (44%), Gaps = 6/289 (2%)
Query: 284 MAMEGCYPDIITYNSLVSFTAKQGVYEETYLVIS---NLLSRGMQPNAVTYNTLIHSLSS 340
MA +P II ++ L+S AK ++ LVIS + G+ N TYN LI+
Sbjct: 69 MAQSRPFPSIIEFSKLLSAIAKMNKFD---LVISFGEKMEILGISHNLYTYNILINCFCR 125
Query: 341 HGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVT 400
+L M + P VT N +LNG C + A++L MV PD VT
Sbjct: 126 CSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVT 185
Query: 401 YNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMI 460
+ TL+ GL E + L+ + C P LVTY ++GL + G + A L ++M
Sbjct: 186 FTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKME 245
Query: 461 GKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVD 520
I + + +S++ C ++A+ L EM K + Y +I LC +
Sbjct: 246 AAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWS 305
Query: 521 IAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKI 569
A + L M+ + P+ + ALI A G + +A L++ +I+ I
Sbjct: 306 DASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSI 354
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 105/202 (51%), Gaps = 2/202 (0%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T + ++ +G+L+ A +L E M ++S P+ + ++LI G + ++ + +++ +M
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM 384
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
+ +P+V+T N +I G CK + ++L +MS G + +TY T+I G F +
Sbjct: 385 IRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 444
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
+ A +K + G P ++TY +L++ +C+ +A+ V E + PDI TYN +
Sbjct: 445 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 504
Query: 300 VSFTAKQGVYEE--TYLVISNL 319
+ K G ++ Y V S L
Sbjct: 505 IEGMCKAGKWKMGGIYFVASAL 526
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 91/197 (46%)
Query: 379 LDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNI 438
LD AI L+ M FP I+ ++ LLS + K D I + S L TYNI
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 439 AIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKD 498
I+ R + A L +M+ G PD +T +SL GFC +++ +A+ L+ +M +
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 499 EKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEAN 558
K + +I GL K A+ +D MV+ C+PD Y A++ + G A
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 559 DLHQRLIEWKILKTEII 575
+L ++ KI +I
Sbjct: 239 NLLNKMEAAKIEANVVI 255
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 125/447 (27%), Positives = 218/447 (48%), Gaps = 9/447 (2%)
Query: 133 RLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINI---MVMSGGVPDVI 189
R M +++ Q PS + R L I ++ K +I + M M G ++
Sbjct: 58 RFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLC 117
Query: 190 TCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQ 249
TCN+++ C+ L A+ + M G P +T+ +++ G +A+ +
Sbjct: 118 TCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQM 177
Query: 250 LRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVY 309
+ G P ++ Y +I+ +C+ AL++L M +G PD++TYNSL+S G +
Sbjct: 178 VGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRW 237
Query: 310 EETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIM 369
+ ++S + R + P+ T+N LI + G ++ E M S P VTY+++
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297
Query: 370 LNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNC 429
+ GLC LD A ++ MVS+ CFPD+VTY+ L++G CK V+ G++L ++
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357
Query: 430 SPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAME 489
VTY I I G R G + A+E++ M+ G+ P+ IT++ L G C ++E+A+
Sbjct: 358 VRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALV 417
Query: 490 LLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCK---PDEKIYDALIK 546
+L +M K Y +I G+CK +V A D+ C+ PD Y ++
Sbjct: 418 ILADMQKNGMDADIVTYNIIIRGMCKAGEV---ADAWDIYCSLNCQGLMPDIWTYTTMML 474
Query: 547 AVADSGMVKEANDLHQRLIEWKILKTE 573
+ G+ +EA+ L +++ E IL E
Sbjct: 475 GLYKKGLRREADALFRKMKEDGILPNE 501
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 122/284 (42%)
Query: 291 PDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDV 350
P I ++ L+S +K Y+ + + G+ N T N L++
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 351 LEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCK 410
L M + P+ VT+ +LNG C+ + A+ ++ MV P++V YNT++ GLCK
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 411 EGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEIT 470
VD + LL + P +VTYN I GL G A + S M + I PD T
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 471 HSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMV 530
++L ++ EA E +EM ++ Y +I GLC ++D A + MV
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 531 RSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKILKTEI 574
C PD Y LI S V+ L + + +++ +
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTV 362
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 203/421 (48%)
Query: 132 GRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITC 191
G + + + +M P +C ++ ++K G+ + M+ PDV T
Sbjct: 177 GMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATF 236
Query: 192 NMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLR 251
N++I LC G + + L++ M SG +P +TYNT++ KG F A+
Sbjct: 237 NILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKS 296
Query: 252 KGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEE 311
KG + TY +LI +CR + +L DM +P+ +TYN+L++ + +G
Sbjct: 297 KGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLI 356
Query: 312 TYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLN 371
+++ +LS G+ PN VT+N LI S G + + +M P+ V+Y ++L+
Sbjct: 357 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLD 416
Query: 372 GLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSP 431
GLCK+ D A Y M +TY ++ GLCK GF+DE + LL ++ P
Sbjct: 417 GLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDP 476
Query: 432 GLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELL 491
+VTY+ I+G ++G ++AKE+ + G+ P+ I +S+L + C + L+EA+ +
Sbjct: 477 DIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIY 536
Query: 492 KEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADS 551
+ M + H + ++ LCK KV A + + M P+ +D LI +S
Sbjct: 537 EAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNS 596
Query: 552 G 552
G
Sbjct: 597 G 597
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 202/446 (45%)
Query: 119 FTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINI 178
+T N IL ++ G ++ ++ M ++ P + LI L G +K ++
Sbjct: 199 YTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQK 258
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN 238
M SG P ++T N V+ CK+G K+A++L++ M G D TYN +I +
Sbjct: 259 MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNR 318
Query: 239 FNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNS 298
+ +D ++ P +TY LI + A ++L +M G P+ +T+N+
Sbjct: 319 IAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNA 378
Query: 299 LVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETS 358
L+ +G ++E + + ++G+ P+ V+Y L+ L + +D M
Sbjct: 379 LIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG 438
Query: 359 SPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGI 418
R+TY M++GLCK+G LD A+ L + M + PDIVTY+ L++G CK G
Sbjct: 439 VCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAK 498
Query: 419 QLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGF 478
+++ + SP + Y+ I RMG ++ A +Y MI +G D T + L
Sbjct: 499 EIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSL 558
Query: 479 CGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDE 538
C ++ EA E ++ M ++ C+I G + A D M + P
Sbjct: 559 CKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTF 618
Query: 539 KIYDALIKAVADSGMVKEANDLHQRL 564
Y +L+K + G ++EA + L
Sbjct: 619 FTYGSLLKGLCKGGHLREAEKFLKSL 644
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 127/516 (24%), Positives = 223/516 (43%), Gaps = 42/516 (8%)
Query: 81 NEVDHEDWGLESFERRESGELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARL 140
N V H W + + + EL+D K V D T N ++ +LC R+ L
Sbjct: 272 NTVLH--WYCKKGRFKAAIELLDHMKS----KGVDADVCTYNMLIHDLCRSNRIAKGYLL 325
Query: 141 IEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCK 200
+ M ++ P+ + LI G G++ +++N M+ G P+ +T N +I G
Sbjct: 326 LRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHIS 385
Query: 201 RGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLIT 260
G K A+ + M G +P ++Y ++ G+ F+ A F+ R G IT
Sbjct: 386 EGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRIT 445
Query: 261 YTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLL 320
YT +I+ +C+ A+ +L +M+ +G PDI+TY++L++ K G ++ ++ +
Sbjct: 446 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY 505
Query: 321 SRGMQPNAVTYNTLIH-----------------------------------SLSSHGYWD 345
G+ PN + Y+TLI+ SL G
Sbjct: 506 RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVA 565
Query: 346 GVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLL 405
++ + M P V+++ ++NG SG +A S++ M P TY +LL
Sbjct: 566 EAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL 625
Query: 406 SGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIV 465
GLCK G + E + L L + V YN + + + G++ A L+ EM+ + I+
Sbjct: 626 KGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL 685
Query: 466 PDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTA-YRCVILGLCKQRKVDIAIQ 524
PD T++SL G C + A+ KE + + + Y C + G+ K + I
Sbjct: 686 PDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIY 745
Query: 525 ALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDL 560
+ M PD +A+I + G +++ NDL
Sbjct: 746 FREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 781
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 126/500 (25%), Positives = 226/500 (45%), Gaps = 23/500 (4%)
Query: 69 RSFQGSAVIDRVNEVDHEDWGLESFERRESGELVDPGKPVKPPPFV-RNDGFTNNKILQN 127
+S IDR ++H D+ R+ LV +K +V + G + I+Q
Sbjct: 61 KSIYNILTIDRWGSLNHMDY------RQARLRLVHGKLALKFLKWVVKQPGLETDHIVQL 114
Query: 128 LCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGL--IKIGQIDKGCKIINIMVMSGGV 185
+C ++ AR+ + AR H +L+ G G + ++ N
Sbjct: 115 VCITTHILVRARMYDP-AR-----HILKELSLMSGKSSFVFGALMTTYRLCN------SN 162
Query: 186 PDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSF 245
P V +++I + G ++ ++++ M L G +P T N I+ + G SF
Sbjct: 163 PSVY--DILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSF 220
Query: 246 WKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAK 305
K+ L++ P + T+ +LI ++C ++ +++ M G P I+TYN+++ + K
Sbjct: 221 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 280
Query: 306 QGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVT 365
+G ++ ++ ++ S+G+ + TYN LIH L +L M + P VT
Sbjct: 281 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 340
Query: 366 YNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLT 425
YN ++NG G + A L + M+S P+ VT+N L+ G EG E +++ Y++
Sbjct: 341 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 400
Query: 426 GTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLE 485
+P V+Y + +DGL + + A+ Y M G+ IT++ + G C L+
Sbjct: 401 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 460
Query: 486 EAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALI 545
EA+ LL EM K Y +I G CK + A + + + R P+ IY LI
Sbjct: 461 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 520
Query: 546 KAVADSGMVKEANDLHQRLI 565
G +KEA +++ +I
Sbjct: 521 YNCCRMGCLKEAIRIYEAMI 540
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/457 (24%), Positives = 206/457 (45%), Gaps = 1/457 (0%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D FT N ++ +LC G++ A + M +P+ S LI G G+ K +
Sbjct: 547 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 606
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
+ M G P T ++ GLCK G+L+ A ++ + + D + YNT++ M
Sbjct: 607 DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS 666
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEG-CYPDIIT 295
GN +AVS + + +++ P TYT LI +CR + A+ ++ G P+ +
Sbjct: 667 GNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVM 726
Query: 296 YNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMN 355
Y V K G ++ + + G P+ VT N +I S G + +D+L M
Sbjct: 727 YTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMG 786
Query: 356 ETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVD 415
+ P TYNI+L+G K + + LY +++ PD +T ++L+ G+C+ ++
Sbjct: 787 NQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLE 846
Query: 416 EGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLA 475
G+++L T+N+ I G + A +L M GI D+ T ++
Sbjct: 847 IGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMV 906
Query: 476 WGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCK 535
+ +E+ +L EM K+ + Y +I GLC+ + A + M+ +
Sbjct: 907 SVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKIC 966
Query: 536 PDEKIYDALIKAVADSGMVKEANDLHQRLIEWKILKT 572
P A+++A+A G EA L + +++ K++ T
Sbjct: 967 PPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPT 1003
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 163/398 (40%), Gaps = 36/398 (9%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLI-EIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKI 175
D +T ++ LC +G+ + A E AR + +P+ T + G+ K GQ G
Sbjct: 687 DSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYF 746
Query: 176 INIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFD 235
M G PD++T N +I G + G ++ DL+ +M P+ TYN ++ G
Sbjct: 747 REQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSK 806
Query: 236 KGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIIT 295
+ + + + ++ + G P +T L+ +C L++L+ G D T
Sbjct: 807 RKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYT 866
Query: 296 YNSLVSFTAKQG-----------------------------------VYEETYLVISNLL 320
+N L+S G ++E+ +V+ +
Sbjct: 867 FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMS 926
Query: 321 SRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLD 380
+G+ P + Y LI+ L G V E M P V + M+ L K G D
Sbjct: 927 KQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKAD 986
Query: 381 RAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAI 440
A L M+ P I ++ TL+ CK G V E ++L +++ LV+YN+ I
Sbjct: 987 EATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLI 1046
Query: 441 DGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGF 478
GL G M A ELY EM G G + + T+ +L G
Sbjct: 1047 TGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1084
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/438 (22%), Positives = 183/438 (41%), Gaps = 11/438 (2%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D N +L +C G L A L M ++S +P + T+LI GL + KG +I
Sbjct: 652 DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR-----KGKTVI 706
Query: 177 NIMVMSGG------VPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTII 230
I+ +P+ + + G+ K G K+ + E M G +PD +T N +I
Sbjct: 707 AILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMI 766
Query: 231 RGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCY 290
G G + + + P L TY +L+ + + + + + G
Sbjct: 767 DGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGIL 826
Query: 291 PDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDV 350
PD +T +SLV + + E ++ + RG++ + T+N LI ++G + D+
Sbjct: 827 PDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDL 886
Query: 351 LEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCK 410
+++M + T + M++ L ++ + + M + P+ Y L++GLC+
Sbjct: 887 VKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCR 946
Query: 411 EGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEIT 470
G + + + P V + + LA+ G + A L M+ +VP +
Sbjct: 947 VGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIAS 1006
Query: 471 HSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMV 530
++L C + EA+EL M K+ +Y +I GLC + + +A + + M
Sbjct: 1007 FTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMK 1066
Query: 531 RSRCKPDEKIYDALIKAV 548
+ Y ALI+ +
Sbjct: 1067 GDGFLANATTYKALIRGL 1084
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 88/203 (43%)
Query: 365 TYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLL 424
Y+I++ + G++ ++ ++ M P + T N +L + K G L +
Sbjct: 165 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 224
Query: 425 TGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQL 484
P + T+NI I+ L GS E + L +M G P +T++++ +C +
Sbjct: 225 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 284
Query: 485 EEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDAL 544
+ A+ELL M K Y +I LC+ ++ L M + P+E Y+ L
Sbjct: 285 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL 344
Query: 545 IKAVADSGMVKEANDLHQRLIEW 567
I ++ G V A+ L ++ +
Sbjct: 345 INGFSNEGKVLIASQLLNEMLSF 367
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 194/385 (50%)
Query: 185 VPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVS 244
V DV + ++I G C+ G ++ + DL+ +++ G SP+ + Y T+I G KG +A
Sbjct: 160 VLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKD 219
Query: 245 FWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTA 304
+ + + G TYTVLI + + + E+ E M +G +P++ TYN +++
Sbjct: 220 LFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLC 279
Query: 305 KQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRV 364
K G ++ + V + RG+ N VTYNTLI L + + V++ M P +
Sbjct: 280 KDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLI 339
Query: 365 TYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLL 424
TYN +++G C G L +A+SL + S P +VTYN L+SG C++G +++ +
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM 399
Query: 425 TGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQL 484
P VTY I ID AR +ME A +L M G+VPD T+S L GFC Q+
Sbjct: 400 EERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQM 459
Query: 485 EEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDAL 544
EA L K M +K+ + Y +ILG CK+ A++ L M P+ Y +
Sbjct: 460 NEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYM 519
Query: 545 IKAVADSGMVKEANDLHQRLIEWKI 569
I+ + KEA L +++I+ I
Sbjct: 520 IEVLCKERKSKEAERLVEKMIDSGI 544
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 186/393 (47%)
Query: 159 LIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSG 218
LI+G + G+I+K ++ + G P+V+ +I G CK+G ++ A DL +M G
Sbjct: 169 LIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLG 228
Query: 219 CSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRAL 278
+ TY +I G+F G + ++ G P L TY ++ +C+ A
Sbjct: 229 LVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAF 288
Query: 279 EVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSL 338
+V ++M G +I+TYN+L+ ++ E V+ + S G+ PN +TYNTLI
Sbjct: 289 QVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGF 348
Query: 339 SSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDI 398
G + + P+ VTYNI+++G C+ G A + M P
Sbjct: 349 CGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSK 408
Query: 399 VTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSE 458
VTY L+ + +++ IQL + P + TY++ I G G M A L+
Sbjct: 409 VTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS 468
Query: 459 MIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRK 518
M+ K P+E+ ++++ G+C A++LLKEM +K+ +YR +I LCK+RK
Sbjct: 469 MVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERK 528
Query: 519 VDIAIQALDLMVRSRCKPDEKIYDALIKAVADS 551
A + ++ M+ S P I + +A DS
Sbjct: 529 SKEAERLVEKMIDSGIDPSTSILSLISRAKNDS 561
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 165/338 (48%)
Query: 129 CTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDV 188
C +G + A L M + + + + T LI GL K G +G ++ M G P++
Sbjct: 209 CKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNL 268
Query: 189 ITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKD 248
T N V+ LCK G K A + ++M G S + +TYNT+I G+ + NEA
Sbjct: 269 YTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQ 328
Query: 249 QLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGV 308
G P LITY LI+ C +AL + D+ G P ++TYN LVS ++G
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGD 388
Query: 309 YEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNI 368
++ + RG++P+ VTY LI + + + + M E P TY++
Sbjct: 389 TSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSV 448
Query: 369 MLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTN 428
+++G C G ++ A L+ +MV ++C P+ V YNT++ G CKEG ++LL +
Sbjct: 449 LIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKE 508
Query: 429 CSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVP 466
+P + +Y I+ L + + A+ L +MI GI P
Sbjct: 509 LAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 181/378 (47%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D ++ +++ C G + + L+ + P+ T LI G K G+I+K +
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
M G V + T ++I GL K G K ++ E M G P+ TYN ++ +
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
G +A + + +G ++TY LI +CR A +V++ M +G P++ITY
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
N+L+ G + + +L SRG+ P+ VTYN L+ G G +++ M E
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDE 416
P++VTY I+++ +S +++AI L +M PD+ TY+ L+ G C +G ++E
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461
Query: 417 GIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAW 476
+L + NC P V YN I G + GS A +L EM K + P+ ++ +
Sbjct: 462 ASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIE 521
Query: 477 GFCGVDQLEEAMELLKEM 494
C + +EA L+++M
Sbjct: 522 VLCKERKSKEAERLVEKM 539
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 177/383 (46%), Gaps = 1/383 (0%)
Query: 193 MVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRK 252
++I + L ++ +M +G P + +N ++ + +FN+ SF+ + K
Sbjct: 99 VIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSK 158
Query: 253 GCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEET 312
+ ++ +LI+ C ++ ++L ++ G P+++ Y +L+ K+G E+
Sbjct: 159 VVLD-VYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKA 217
Query: 313 YLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNG 372
+ + G+ N TY LI+ L +G ++ E M E P TYN ++N
Sbjct: 218 KDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQ 277
Query: 373 LCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPG 432
LCK G A ++ M +IVTYNTL+ GLC+E ++E +++ + +P
Sbjct: 278 LCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPN 337
Query: 433 LVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLK 492
L+TYN IDG +G + A L ++ +G+ P +T++ L GFC A +++K
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVK 397
Query: 493 EMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSG 552
EM ++ K Y +I + ++ AIQ M PD Y LI G
Sbjct: 398 EMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKG 457
Query: 553 MVKEANDLHQRLIEWKILKTEII 575
+ EA+ L + ++E E+I
Sbjct: 458 QMNEASRLFKSMVEKNCEPNEVI 480
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 142/308 (46%)
Query: 124 ILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSG 183
++ L G + E M P+ + ++ L K G+ ++ + M G
Sbjct: 239 LINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERG 298
Query: 184 GVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAV 243
+++T N +IGGLC+ L A +V+ M G +P+ ITYNT+I G G +A+
Sbjct: 299 VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKAL 358
Query: 244 SFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFT 303
S +D +G P L+TY +L+ CR A +++++M G P +TY L+
Sbjct: 359 SLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTF 418
Query: 304 AKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTR 363
A+ E+ + ++ G+ P+ TY+ LIH G + + + M E + P
Sbjct: 419 ARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNE 478
Query: 364 VTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYL 423
V YN M+ G CK G RA+ L M + P++ +Y ++ LCKE E +L+
Sbjct: 479 VIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEK 538
Query: 424 LTGTNCSP 431
+ + P
Sbjct: 539 MIDSGIDP 546
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 129/278 (46%)
Query: 119 FTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINI 178
+T N ++ LC GR A ++ + M + + + LI GL + ++++ K+++
Sbjct: 269 YTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQ 328
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN 238
M G P++IT N +I G C G L A+ L D+ G SP +TYN ++ G KG+
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGD 388
Query: 239 FNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNS 298
+ A K+ +G P +TYT+LI+ R +A+++ M G PD+ TY+
Sbjct: 389 TSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSV 448
Query: 299 LVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETS 358
L+ +G E + +++ + +PN V YNT+I G +L+ M E
Sbjct: 449 LIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKE 508
Query: 359 SPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFP 396
P +Y M+ LCK A L M+ P
Sbjct: 509 LAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 106/243 (43%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T N ++ LC +L A ++++ M P+ + LI G +G++ K + +
Sbjct: 305 TYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDL 364
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
G P ++T N+++ G C++G A +V++M G P +TY +I N
Sbjct: 365 KSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNM 424
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
+A+ G P + TY+VLI C A + + M + C P+ + YN++
Sbjct: 425 EKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTM 484
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS 359
+ K+G ++ + + + PN +Y +I L + ++E M ++
Sbjct: 485 ILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGI 544
Query: 360 PPT 362
P+
Sbjct: 545 DPS 547
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 195/385 (50%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
+ +D ++ ++ C RL A + M + P + +L+ G + + +
Sbjct: 110 ISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAM 169
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
+++ +V G P+V+ N +I LC++G + +A+D+++ M G PD +TYN++I +
Sbjct: 170 SLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRL 229
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
F G + + D +R G P +IT++ LI++ + + A + +M P+I
Sbjct: 230 FHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNI 289
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
+TYNSL++ G+ +E V++ L+S+G PNAVTYNTLI+ D +L +
Sbjct: 290 VTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCV 349
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
M+ TYN + G C++G A + MVS PD+ T+N LL GLC G
Sbjct: 350 MSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGK 409
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSS 473
+ + + L L + G++TYNI I GL + +E A L+ + KG+ PD IT+ +
Sbjct: 410 IGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYIT 469
Query: 474 LAWGFCGVDQLEEAMELLKEMHKKD 498
+ G EA EL ++M K+D
Sbjct: 470 MMIGLRRKRLWREAHELYRKMQKED 494
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 206/415 (49%), Gaps = 3/415 (0%)
Query: 153 FPSCTNLIRGLIKIGQIDKGCKIINI---MVMSGGVPDVITCNMVIGGLCKRGYLKSAVD 209
PS + R LI I +++K +I++ + M G D+ + +I C+ L A+
Sbjct: 76 LPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALS 135
Query: 210 LVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVC 269
+ M G P +T+ +++ G F EA+S + G P ++ Y +I+ +C
Sbjct: 136 CLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLC 195
Query: 270 RYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAV 329
AL+VL+ M G PD++TYNSL++ G + + ++S+++ G+ P+ +
Sbjct: 196 EKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVI 255
Query: 330 TYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTM 389
T++ LI G M + S P VTYN ++NGLC GLLD A + + +
Sbjct: 256 TFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVL 315
Query: 390 VSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSM 449
VS+ FP+ VTYNTL++G CK VD+G+++L +++ TYN G + G
Sbjct: 316 VSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKF 375
Query: 450 ESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCV 509
+A+++ M+ G+ PD T + L G C ++ +A+ L+++ K + Y +
Sbjct: 376 SAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNII 435
Query: 510 ILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
I GLCK KV+ A + PD Y ++ + + +EA++L++++
Sbjct: 436 IKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKM 490
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 168/354 (47%)
Query: 204 LKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTV 263
A+ L DM+ S P + ++ ++ + + +S ++ G L ++T
Sbjct: 60 FNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTT 119
Query: 264 LIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRG 323
LI+ CR AL L M G P I+T+ SLV+ + E ++ ++ G
Sbjct: 120 LIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLG 179
Query: 324 MQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAI 383
+PN V YNT+I SL G + DVL+ M + P VTYN ++ L SG +
Sbjct: 180 YEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSA 239
Query: 384 SLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGL 443
+ S M+ PD++T++ L+ KEG + E + + + +P +VTYN I+GL
Sbjct: 240 RILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGL 299
Query: 444 ARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKH 503
G ++ AK++ + ++ KG P+ +T+++L G+C ++++ M++L M +
Sbjct: 300 CIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDT 359
Query: 504 TAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
Y + G C+ K A + L MV PD ++ L+ + D G + +A
Sbjct: 360 FTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKA 413
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 179/379 (47%)
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN 238
M S +P ++ + ++ + K ++ + L + + G S D ++ T+I
Sbjct: 70 MAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCAR 129
Query: 239 FNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNS 298
+ A+S ++ G P ++T+ L+ C A+ +++ + G P+++ YN+
Sbjct: 130 LSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNT 189
Query: 299 LVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETS 358
++ ++G V+ ++ G++P+ VTYN+LI L G W +L M
Sbjct: 190 IIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMG 249
Query: 359 SPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGI 418
P +T++ +++ K G L A Y+ M+ S P+IVTYN+L++GLC G +DE
Sbjct: 250 ISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAK 309
Query: 419 QLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGF 478
++L +L P VTYN I+G + ++ ++ M G+ D T+++L G+
Sbjct: 310 KVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGY 369
Query: 479 CGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDE 538
C + A ++L M + ++ GLC K+ A+ L+ + +S+
Sbjct: 370 CQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGI 429
Query: 539 KIYDALIKAVADSGMVKEA 557
Y+ +IK + + V++A
Sbjct: 430 ITYNIIIKGLCKADKVEDA 448
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 176/383 (45%), Gaps = 7/383 (1%)
Query: 188 VITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAIT----YNTIIRGMFDKGNFNEAV 243
VI + G R L+ +LV +SL C+ A + Y +R FN+A+
Sbjct: 6 VIVIALTAKGFLHRHLLEKG-NLVTALSLRICNSRAFSGRSDYRERLRSGLHSIKFNDAL 64
Query: 244 SFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFT 303
+ + D P ++ ++ L+ + + + + + M G D+ ++ +L+
Sbjct: 65 TLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCF 124
Query: 304 AKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSS-HGYWDGVDDVLEIMNETSSPPT 362
+ + ++ G +P+ VT+ +L++ + +++ + V +I+ P
Sbjct: 125 CRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVG-LGYEPN 183
Query: 363 RVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLY 422
V YN +++ LC+ G ++ A+ + M PD+VTYN+L++ L G ++L
Sbjct: 184 VVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILS 243
Query: 423 LLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVD 482
+ SP ++T++ ID + G + AK+ Y+EMI + + P+ +T++SL G C
Sbjct: 244 DMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHG 303
Query: 483 QLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYD 542
L+EA ++L + K Y +I G CK ++VD ++ L +M R D Y+
Sbjct: 304 LLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYN 363
Query: 543 ALIKAVADSGMVKEANDLHQRLI 565
L + +G A + R++
Sbjct: 364 TLYQGYCQAGKFSAAEKVLGRMV 386
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 91/213 (42%)
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
M E+ P+ V ++ +L + K + ISL+ + D+ ++ TL+ C+
Sbjct: 70 MAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCAR 129
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSS 473
+ + L + P +VT+ ++G + A L +++G G P+ + +++
Sbjct: 130 LSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNT 189
Query: 474 LAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSR 533
+ C Q+ A+++LK M K + Y +I L ++ + L M+R
Sbjct: 190 IIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMG 249
Query: 534 CKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
PD + ALI G + EA + +I+
Sbjct: 250 ISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQ 282
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 192 bits (487), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 124/422 (29%), Positives = 202/422 (47%), Gaps = 3/422 (0%)
Query: 143 IMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRG 202
+M K P +C +++ L ++ +I+ M +V T N++I LCK G
Sbjct: 180 LMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEG 239
Query: 203 YLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYT 262
LK A + M + G P +TYNT+++G +G A + KG P + TY
Sbjct: 240 KLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYN 299
Query: 263 VLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSR 322
++ +C RA EVL +M G PD ++YN L+ + G E + ++ +
Sbjct: 300 PILSWMC---NEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQ 356
Query: 323 GMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRA 382
GM P TYNTLIH L + + ++ + E VTYNI++NG C+ G +A
Sbjct: 357 GMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKA 416
Query: 383 ISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDG 442
+L+ M+++ P TY +L+ LC++ E +L + G P LV N +DG
Sbjct: 417 FALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDG 476
Query: 443 LARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIK 502
+G+M+ A L EM I PD++T++ L G CG + EEA EL+ EM ++ K
Sbjct: 477 HCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPD 536
Query: 503 HTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQ 562
H +Y +I G K+ A D M+ P Y+AL+K ++ + + A +L +
Sbjct: 537 HISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLR 596
Query: 563 RL 564
+
Sbjct: 597 EM 598
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 190/382 (49%), Gaps = 5/382 (1%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
++++ +T N ++ LC G+L A + IM P + L++G G+I+
Sbjct: 221 IKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGAR 280
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
II+ M G PD+ T N ++ +C G A +++ +M G PD+++YN +IRG
Sbjct: 281 LIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIRGC 337
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVL-EDMAMEGCYPD 292
+ G+ A ++ + +++G P TY LI + I A E+L ++ +G D
Sbjct: 338 SNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFME-NKIEAAEILIREIREKGIVLD 396
Query: 293 IITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLE 352
+TYN L++ + G ++ + + +++ G+QP TY +LI+ L D++ E
Sbjct: 397 SVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFE 456
Query: 353 IMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEG 412
+ P V N +++G C G +DRA SL M S PD VTYN L+ GLC EG
Sbjct: 457 KVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEG 516
Query: 413 FVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHS 472
+E +L+ + P ++YN I G ++ G + A + EM+ G P +T++
Sbjct: 517 KFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYN 576
Query: 473 SLAWGFCGVDQLEEAMELLKEM 494
+L G + E A ELL+EM
Sbjct: 577 ALLKGLSKNQEGELAEELLREM 598
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 174/404 (43%), Gaps = 38/404 (9%)
Query: 189 ITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKD 248
I ++++ C+ + A++ M G P T N I+ + A F+ D
Sbjct: 156 ILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYAD 215
Query: 249 QLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGV 308
R + T+ ++I ++C+ +A L M + G P I+TYN+LV + +G
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR 275
Query: 309 YEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNI 368
E L+IS + S+G QP+ TYN ++ + + G +VL M E P V+YNI
Sbjct: 276 IEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNI 332
Query: 369 MLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTN 428
++ G +G L+ A + MV + P TYNTL+ GL E ++ L+ +
Sbjct: 333 LIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKG 392
Query: 429 CSPGLVTYNIAIDG-----------------------------------LARMGSMESAK 453
VTYNI I+G L R A
Sbjct: 393 IVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREAD 452
Query: 454 ELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGL 513
EL+ +++GKG+ PD + ++L G C + ++ A LLKEM Y C++ GL
Sbjct: 453 ELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGL 512
Query: 514 CKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
C + K + A + + M R KPD Y+ LI + G K A
Sbjct: 513 CGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHA 556
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 158/366 (43%), Gaps = 38/366 (10%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T N IL +C GR A+ ++ M +P S LIRG G ++
Sbjct: 294 DMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYR 350
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
+ MV G VP T N +I GL +++A L+ ++ G D++TYN +I G
Sbjct: 351 DEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQH 410
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
G+ +A + + + G P TYT LI ++CR A E+ E + +G PD++
Sbjct: 411 GDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMM 470
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
N+L+ G + + ++ + + P+ VTYN L+ L G ++ +++ M
Sbjct: 471 NTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKR 530
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDE 416
P ++YN +++G K G A + M+S P ++TYN LL GL K E
Sbjct: 531 RGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKN---QE 587
Query: 417 GIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAW 476
G E A+EL EM +GIVP++ + S+
Sbjct: 588 G--------------------------------ELAEELLREMKSEGIVPNDSSFCSVIE 615
Query: 477 GFCGVD 482
+D
Sbjct: 616 AMSNLD 621
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 148/308 (48%), Gaps = 7/308 (2%)
Query: 262 TVLIELVCRYCGAIR----ALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVIS 317
T+L +L+ R C +R A+E M +G YP T N +++ ++ E ++ +
Sbjct: 155 TILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYA 214
Query: 318 NLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSG 377
++ ++ N T+N +I+ L G L IM PT VTYN ++ G G
Sbjct: 215 DMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRG 274
Query: 378 LLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYN 437
++ A + S M S+ PD+ TYN +LS +C EG E +L + P V+YN
Sbjct: 275 RIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSYN 331
Query: 438 IAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKK 497
I I G + G +E A EM+ +G+VP T+++L G +++E A L++E+ +K
Sbjct: 332 ILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREK 391
Query: 498 DEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
+ Y +I G C+ A D M+ +P + Y +LI + +EA
Sbjct: 392 GIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREA 451
Query: 558 NDLHQRLI 565
++L ++++
Sbjct: 452 DELFEKVV 459
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 6/227 (2%)
Query: 347 VDDVLE---IMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNT 403
VD+ +E +M E P T N +L L + ++ A Y+ M ++ T+N
Sbjct: 171 VDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNI 230
Query: 404 LLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKG 463
+++ LCKEG + + L ++ P +VTYN + G + G +E A+ + SEM KG
Sbjct: 231 MINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKG 290
Query: 464 IVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAI 523
PD T++ + C + A E+L+EM + +Y +I G +++A
Sbjct: 291 FQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAF 347
Query: 524 QALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKIL 570
D MV+ P Y+ LI + ++ A L + + E I+
Sbjct: 348 AYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIV 394
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 209/439 (47%), Gaps = 7/439 (1%)
Query: 132 GRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITC 191
G L A + M R P SC L+ K+G+ D + M+ +G P V T
Sbjct: 206 GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTY 265
Query: 192 NMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLR 251
N++I +CK G +++A L E+M G PD +TYN++I G G ++ V F+++
Sbjct: 266 NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 325
Query: 252 KGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEE 311
C P +ITY LI C++ LE +M G P++++Y++LV K+G+ ++
Sbjct: 326 MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQ 385
Query: 312 TYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTR---VTYNI 368
++ G+ PN TY +LI + G + D + NE VTY
Sbjct: 386 AIKFYVDMRRVGLVPNEYTYTSLIDANCKIG---NLSDAFRLGNEMLQVGVEWNVVTYTA 442
Query: 369 MLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTN 428
+++GLC + + A L+ M + P++ +YN L+ G K +D ++LL L G
Sbjct: 443 LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 502
Query: 429 CSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAM 488
P L+ Y I GL + +E+AK + +EM GI + + +++L + E +
Sbjct: 503 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGL 562
Query: 489 ELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSR-CKPDEKIYDALIKA 547
LL EM + D ++ + +I GLCK + V A+ + + + + I+ A+I
Sbjct: 563 HLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDG 622
Query: 548 VADSGMVKEANDLHQRLIE 566
+ V+ A L +++++
Sbjct: 623 LCKDNQVEAATTLFEQMVQ 641
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 119/491 (24%), Positives = 212/491 (43%), Gaps = 36/491 (7%)
Query: 119 FTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINI 178
FT N ++ +C G + AA L E M + +P + ++I G K+G++D
Sbjct: 263 FTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEE 322
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN 238
M PDVIT N +I CK G L ++ +M +G P+ ++Y+T++ +G
Sbjct: 323 MKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGM 382
Query: 239 FNEAVSFWKDQLRKGCPPY-----------------------------------LITYTV 263
+A+ F+ D R G P ++TYT
Sbjct: 383 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 442
Query: 264 LIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRG 323
LI+ +C A E+ M G P++ +YN+L+ K + +++ L RG
Sbjct: 443 LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 502
Query: 324 MQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAI 383
++P+ + Y T I L S + V+ M E + Y +++ KSG +
Sbjct: 503 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGL 562
Query: 384 SLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGT-NCSPGLVTYNIAIDG 442
L M +VT+ L+ GLCK V + + ++ + IDG
Sbjct: 563 HLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDG 622
Query: 443 LARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIK 502
L + +E+A L+ +M+ KG+VPD ++SL G + EA+ L +M + K+
Sbjct: 623 LCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLD 682
Query: 503 HTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQ 562
AY ++ GL ++ A L+ M+ PDE + +++K + G + EA +L
Sbjct: 683 LLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQS 742
Query: 563 RLIEWKILKTE 573
L++ ++L ++
Sbjct: 743 YLMKHQLLTSD 753
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 169/385 (43%)
Query: 185 VPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVS 244
VP + + L G L+ A+ M P + N ++ G ++
Sbjct: 189 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 248
Query: 245 FWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTA 304
F+KD + G P + TY ++I+ +C+ A + E+M G PD +TYNS++
Sbjct: 249 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 308
Query: 305 KQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRV 364
K G ++T + +P+ +TYN LI+ G + M P V
Sbjct: 309 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVV 368
Query: 365 TYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLL 424
+Y+ +++ CK G++ +AI Y M P+ TY +L+ CK G + + +L +
Sbjct: 369 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 428
Query: 425 TGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQL 484
+VTY IDGL M+ A+EL+ +M G++P+ ++++L GF +
Sbjct: 429 LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNM 488
Query: 485 EEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDAL 544
+ A+ELL E+ + K Y I GLC K++ A ++ M K + IY L
Sbjct: 489 DRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTL 548
Query: 545 IKAVADSGMVKEANDLHQRLIEWKI 569
+ A SG E L + E I
Sbjct: 549 MDAYFKSGNPTEGLHLLDEMKELDI 573
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 138/314 (43%)
Query: 251 RKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYE 310
R C P + L ++ A++ M +P + N L+ AK G +
Sbjct: 185 RNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTD 244
Query: 311 ETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIML 370
+ +++ G +P TYN +I + G + + E M P VTYN M+
Sbjct: 245 DVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMI 304
Query: 371 NGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCS 430
+G K G LD + + M C PD++TYN L++ CK G + G++ + G
Sbjct: 305 DGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLK 364
Query: 431 PGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMEL 490
P +V+Y+ +D + G M+ A + Y +M G+VP+E T++SL C + L +A L
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 491 LKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVAD 550
EM + + Y +I GLC ++ A + M + P+ Y+ALI
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484
Query: 551 SGMVKEANDLHQRL 564
+ + A +L L
Sbjct: 485 AKNMDRALELLNEL 498
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 188 bits (478), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 129/468 (27%), Positives = 220/468 (47%), Gaps = 10/468 (2%)
Query: 99 GELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTN 158
GE+VD G + P+ N ++ C G + AA + M K P + T+
Sbjct: 426 GEMVDTGLKLSVYPY--------NSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTS 477
Query: 159 LIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSG 218
L+ G G+I+K ++ + M G P + T ++ GL + G ++ AV L +M+
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN 537
Query: 219 CSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRAL 278
P+ +TYN +I G ++G+ ++A F K+ KG P +Y LI +C A A
Sbjct: 538 VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK 597
Query: 279 EVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSL 338
++ + C + I Y L+ ++G EE V ++ RG+ + V Y LI
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGS 657
Query: 339 SSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDI 398
H +L+ M++ P V Y M++ K+G A ++ M++E C P+
Sbjct: 658 LKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717
Query: 399 VTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMG-SMESAKELYS 457
VTY +++GLCK GFV+E L + + P VTY +D L + M+ A EL++
Sbjct: 718 VTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHN 777
Query: 458 EMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQR 517
++ KG++ + T++ L GFC ++EEA EL+ M Y +I LC++
Sbjct: 778 AIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRN 836
Query: 518 KVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLI 565
V AI+ + M +PD Y+ LI +G + +A +L ++
Sbjct: 837 DVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEML 884
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/424 (30%), Positives = 209/424 (49%), Gaps = 8/424 (1%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T ++ C++G++ A RL M K P + T L+ GL + G I K+ N M
Sbjct: 474 TYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM 533
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
P+ +T N++I G C+ G + A + +++M+ G PD +Y +I G+ G
Sbjct: 534 AEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQA 593
Query: 240 NEAVSFWKDQLRKG-CPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNS 298
+EA F D L KG C I YT L+ CR AL V ++M G D++ Y
Sbjct: 594 SEAKVFV-DGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGV 652
Query: 299 LVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETS 358
L+ + K + + ++ + RG++P+ V Y ++I + S G + + ++M
Sbjct: 653 LIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEG 712
Query: 359 SPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVD--E 416
P VTY ++NGLCK+G ++ A L S M S P+ VTY L L K G VD +
Sbjct: 713 CVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQK 771
Query: 417 GIQLL-YLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLA 475
++L +L G + TYN+ I G R G +E A EL + MIG G+ PD IT++++
Sbjct: 772 AVELHNAILKGLLANTA--TYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMI 829
Query: 476 WGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCK 535
C + +++A+EL M +K + AY +I G C ++ A + + M+R
Sbjct: 830 NELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLI 889
Query: 536 PDEK 539
P+ K
Sbjct: 890 PNNK 893
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 126/479 (26%), Positives = 222/479 (46%), Gaps = 36/479 (7%)
Query: 124 ILQNLCTRGRLMAAARLIEIMARK-SQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMS 182
++Q+ R++ + ++M K S +P + + L+ GL+K ++ N MV
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSV 221
Query: 183 GGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEA 242
G PDV VI LC+ L A +++ M +GC + + YN +I G+ K EA
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281
Query: 243 VSFWKDQLRKGCPPYLITYTVLI-----------------ELVC---------------- 269
V KD K P ++TY L+ E++C
Sbjct: 282 VGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEG 341
Query: 270 -RYCGAIR-ALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPN 327
R G I AL +++ + G P++ YN+L+ K + E L+ + G++PN
Sbjct: 342 LRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPN 401
Query: 328 AVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYS 387
VTY+ LI G D L M +T + YN ++NG CK G + A +
Sbjct: 402 DVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMA 461
Query: 388 TMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMG 447
M+++ P +VTY +L+ G C +G +++ ++L + +TG +P + T+ + GL R G
Sbjct: 462 EMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAG 521
Query: 448 SMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYR 507
+ A +L++EM + P+ +T++ + G+C + +A E LKEM +K +YR
Sbjct: 522 LIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYR 581
Query: 508 CVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
+I GLC + A +D + + C+ +E Y L+ G ++EA + Q +++
Sbjct: 582 PLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQ 640
Score = 178 bits (452), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 118/453 (26%), Positives = 205/453 (45%), Gaps = 7/453 (1%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
+R D + ++++LC L A +I M + LI GL K ++ +
Sbjct: 223 IRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAV 282
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
I + PDV+T ++ GLCK + ++++++M SP ++++ G+
Sbjct: 283 GIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGL 342
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
+G EA++ K + G P L Y LI+ +C+ A + + M G P+
Sbjct: 343 RKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPND 402
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
+TY+ L+ ++G + + ++ G++ + YN+LI+ G + +
Sbjct: 403 VTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAE 462
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
M PT VTY ++ G C G +++A+ LY M + P I T+ TLLSGL + G
Sbjct: 463 MINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGL 522
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSS 473
+ + ++L + N P VTYN+ I+G G M A E EM KGIVPD ++
Sbjct: 523 IRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRP 582
Query: 474 LAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSR 533
L G C Q EA + +HK + ++ Y ++ G C++ K++ A+ MV+
Sbjct: 583 LIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRG 642
Query: 534 CKPDEKIYDALIKAVADS-------GMVKEAND 559
D Y LI G++KE +D
Sbjct: 643 VDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHD 675
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/460 (25%), Positives = 200/460 (43%), Gaps = 14/460 (3%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLI-EIMARKSQIPHFPSCTNLIRGLIKIGQIDKG 172
+R + T + ++ C RG+L A + E++ ++ +P +LI G K G I
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPY-NSLINGHCKFGDISAA 456
Query: 173 CKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRG 232
+ M+ P V+T ++GG C +G + A+ L +M+ G +P T+ T++ G
Sbjct: 457 EGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSG 516
Query: 233 MFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPD 292
+F G +AV + + P +TY V+IE C +A E L++M +G PD
Sbjct: 517 LFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPD 576
Query: 293 IITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLE 352
+Y L+ G E + + L + N + Y L+H G + V +
Sbjct: 577 TYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQ 636
Query: 353 IMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEG 412
M + V Y ++++G K L M PD V Y +++ K G
Sbjct: 637 EMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTG 696
Query: 413 FVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHS 472
E + L+ C P VTY I+GL + G + A+ L S+M VP+++T+
Sbjct: 697 DFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYG 756
Query: 473 SLAWGFCGVDQL---EEAMELLKEMHKKDEK--IKHTA-YRCVILGLCKQRKVDIAIQAL 526
C +D L E M+ E+H K + +TA Y +I G C+Q +++ A + +
Sbjct: 757 ------CFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELI 810
Query: 527 DLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
M+ PD Y +I + VK+A +L + E
Sbjct: 811 TRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTE 850
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/479 (22%), Positives = 207/479 (43%), Gaps = 39/479 (8%)
Query: 124 ILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSG 183
+++ L RG++ A L++ + P+ LI L K + + + + M G
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG 397
Query: 184 GVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAV 243
P+ +T +++I C+RG L +A+ + +M +G YN++I G G+ + A
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAE 457
Query: 244 SFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFT 303
F + + K P ++TYT L+ C +AL + +M +G P I T+ +L+S
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL 517
Query: 304 AKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTR 363
+ G+ + + + + ++PN VTYN +I G + L+ M E P
Sbjct: 518 FRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDT 577
Query: 364 VTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQ---- 419
+Y +++GLC +G A + +C + + Y LL G C+EG ++E +
Sbjct: 578 YSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQE 637
Query: 420 -------------------------------LLYLLTGTNCSPGLVTYNIAIDGLARMGS 448
LL + P V Y ID ++ G
Sbjct: 638 MVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGD 697
Query: 449 MESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRC 508
+ A ++ MI +G VP+E+T++++ G C + EA L +M Y C
Sbjct: 698 FKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGC 757
Query: 509 VILGLCKQRKVDI--AIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLI 565
L + + +VD+ A++ + +++ + Y+ LI+ G ++EA++L R+I
Sbjct: 758 -FLDILTKGEVDMQKAVELHNAILKGLL-ANTATYNMLIRGFCRQGRIEEASELITRMI 814
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 157/349 (44%)
Query: 221 PDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEV 280
P+ T + ++ G+ +F A+ + D + G P + YT +I +C RA E+
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 281 LEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSS 340
+ M GC +I+ YN L+ K+ E + +L + ++P+ VTY TL++ L
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 341 HGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVT 400
++ ++++ M P+ + ++ GL K G ++ A++L +V P++
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369
Query: 401 YNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMI 460
YN L+ LCK E L + P VTY+I ID R G +++A EM+
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 461 GKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVD 520
G+ ++SL G C + A + EM K + Y ++ G C + K++
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489
Query: 521 IAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKI 569
A++ M P + L+ + +G++++A L + EW +
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNV 538
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 140/325 (43%), Gaps = 35/325 (10%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D ++ ++ LC G+ A ++ + + + + T L+ G + G++++ +
Sbjct: 576 DTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVC 635
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
MV G D++ ++I G K K L+++M G PD + Y ++I
Sbjct: 636 QEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKT 695
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCR---------YCGAIRALEVLEDMAME 287
G+F EA W + +GC P +TYT +I +C+ C ++ + + +
Sbjct: 696 GDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTY 755
Query: 288 GCYPDIIT--------------------------YNSLVSFTAKQGVYEETYLVISNLLS 321
GC+ DI+T YN L+ +QG EE +I+ ++
Sbjct: 756 GCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIG 815
Query: 322 RGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDR 381
G+ P+ +TY T+I+ L ++ M E P RV YN +++G C +G + +
Sbjct: 816 DGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGK 875
Query: 382 AISLYSTMVSESCFPDIVTYNTLLS 406
A L + M+ + P+ T T S
Sbjct: 876 ATELRNEMLRQGLIPNNKTSRTTTS 900
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 129/284 (45%)
Query: 291 PDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDV 350
P++ T ++L+ K + + ++++S G++P+ Y +I SL ++
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 351 LEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCK 410
+ M T V YN++++GLCK + A+ + + + PD+VTY TL+ GLCK
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 411 EGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEIT 470
+ G++++ + SP + ++GL + G +E A L ++ G+ P+
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369
Query: 471 HSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMV 530
+++L C + EA L M K + Y +I C++ K+D A+ L MV
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 531 RSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKILKTEI 574
+ K Y++LI G + A +I K+ T +
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVV 473
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 124/268 (46%), Gaps = 18/268 (6%)
Query: 320 LSRGMQPNAVTYNTLIHSL-SSHGYWDG----------------VDDVLEIMNETSSPPT 362
L RG + ++ LIH+L ++ +W V +VL E +
Sbjct: 96 LHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSS 155
Query: 363 RVTYNIMLNGLCKSGLLDRAISLYSTMVSE-SCFPDIVTYNTLLSGLCKEGFVDEGIQLL 421
++++++ +S + + ++ M+++ S P++ T + LL GL K ++L
Sbjct: 156 SSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELF 215
Query: 422 YLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGV 481
+ P + Y I L + + AKE+ + M G + + ++ L G C
Sbjct: 216 NDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKK 275
Query: 482 DQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIY 541
++ EA+ + K++ KD K Y ++ GLCK ++ +I ++ +D M+ R P E
Sbjct: 276 QKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAV 335
Query: 542 DALIKAVADSGMVKEANDLHQRLIEWKI 569
+L++ + G ++EA +L +R++++ +
Sbjct: 336 SSLVEGLRKRGKIEEALNLVKRVVDFGV 363
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 188 bits (477), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 209/439 (47%), Gaps = 1/439 (0%)
Query: 137 AARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIG 196
A + ++A K P +C L+ L++ + K C+ ++ V G PDV I
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDV-VCKGVSPDVYLFTTAIN 268
Query: 197 GLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPP 256
CK G ++ AV L M +G +P+ +T+NT+I G+ G ++EA F + + +G P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 257 YLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVI 316
LITY++L++ + R A VL++M +G P++I YN+L+ + G + +
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 317 SNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKS 376
++S+G+ + TYNTLI +G D + +L+ M + ++ ++ LC
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 448
Query: 377 GLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTY 436
+ D A+ M+ + P TL+SGLCK G + ++L + T
Sbjct: 449 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 508
Query: 437 NIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHK 496
N + GL G ++ A + E++G+G V D +++++L G CG +L+EA L EM K
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 497 KDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKE 556
+ K + Y +I GL KV+ AIQ D R+ PD Y +I + +E
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 557 ANDLHQRLIEWKILKTEII 575
+ ++ + ++
Sbjct: 629 GQEFFDEMMSKNVQPNTVV 647
Score = 175 bits (443), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 208/452 (46%), Gaps = 2/452 (0%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
V D + + C G++ A +L M P+ + +I GL G+ D+
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 315
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
MV G P +IT ++++ GL + + A ++++M+ G P+ I YN +I
Sbjct: 316 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF 375
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
+ G+ N+A+ + KG TY LI+ C+ A A +L++M G +
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHG-YWDGVDDVLE 352
++ S++ +++ + +L R M P TLI L HG + ++ +
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 353 IMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEG 412
+N+ TR T N +L+GLC++G LD A + ++ C D V+YNTL+SG C +
Sbjct: 496 FLNKGFVVDTR-TSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554
Query: 413 FVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHS 472
+DE L + P TY+I I GL M +E A + + + G++PD T+S
Sbjct: 555 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 473 SLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRS 532
+ G C ++ EE E EM K+ + Y +I C+ ++ +A++ + M
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 674
Query: 533 RCKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
P+ Y +LIK ++ V+EA L + +
Sbjct: 675 GISPNSATYTSLIKGMSIISRVEEAKLLFEEM 706
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/439 (25%), Positives = 199/439 (45%), Gaps = 6/439 (1%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N ++ + G L A + ++M K + LI+G K GQ D +++ M+
Sbjct: 369 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 428
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
G + + VI LC SA+ V +M L SP T+I G+ G ++
Sbjct: 429 IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 488
Query: 242 AVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVS 301
A+ W L KG T L+ +C A + +++ GC D ++YN+L+S
Sbjct: 489 ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 548
Query: 302 FTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSP- 360
+ +E ++ + ++ RG++P+ TY+ LI L + + V++ ++ ++
Sbjct: 549 GCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN---MNKVEEAIQFWDDCKRNG 605
Query: 361 --PTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGI 418
P TY++M++G CK+ + + M+S++ P+ V YN L+ C+ G + +
Sbjct: 606 MLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMAL 665
Query: 419 QLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGF 478
+L + SP TY I G++ + +E AK L+ EM +G+ P+ +++L G+
Sbjct: 666 ELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGY 725
Query: 479 CGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDE 538
+ Q+ + LL+EMH K+ Y +I G + V A + L+ M PD
Sbjct: 726 GKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDS 785
Query: 539 KIYDALIKAVADSGMVKEA 557
Y I G V EA
Sbjct: 786 ITYKEFIYGYLKQGGVLEA 804
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 203/455 (44%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T + +++ L R+ A +++ M +K P+ NLI I+ G ++K +I ++M
Sbjct: 332 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 391
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
V G T N +I G CK G +A L+++M G + + ++ ++I + F
Sbjct: 392 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 451
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
+ A+ F + L + P T LI +C++ +ALE+ +G D T N+L
Sbjct: 452 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 511
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS 359
+ + G +E + + +L RG + V+YNTLI D L+ M +
Sbjct: 512 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 571
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQ 419
P TY+I++ GL ++ AI + PD+ TY+ ++ G CK +EG +
Sbjct: 572 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631
Query: 420 LLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFC 479
+ N P V YN I R G + A EL +M KGI P+ T++SL G
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 480 GVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEK 539
+ ++EEA L +EM + + Y +I G K ++ L M P++
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 751
Query: 540 IYDALIKAVADSGMVKEANDLHQRLIEWKILKTEI 574
Y +I A G V EA+ L + E I+ I
Sbjct: 752 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSI 786
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 176/428 (41%), Gaps = 10/428 (2%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T N +++ C G+ A RL++ M + S T++I L D + + M
Sbjct: 402 TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEM 461
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
++ P +I GLCK G A++L G D T N ++ G+ + G
Sbjct: 462 LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL 521
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
+EA K+ L +GC ++Y LI C A L++M G PD TY+ L
Sbjct: 522 DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL 581
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS 359
+ EE + GM P+ TY+ +I + + + M +
Sbjct: 582 ICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNV 641
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQ 419
P V YN ++ C+SG L A+ L M + P+ TY +L+ G+ V+E
Sbjct: 642 QPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKL 701
Query: 420 LLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFC 479
L + P + Y IDG ++G M + L EM K + P++IT++ + G+
Sbjct: 702 LFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYA 761
Query: 480 GVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEK 539
+ EA LL EM +K Y+ I G KQ V A + DE+
Sbjct: 762 RDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKG----------SDEE 811
Query: 540 IYDALIKA 547
Y A+I+
Sbjct: 812 NYAAIIEG 819
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 111/229 (48%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
++ D +T + ++ L ++ A + + R +P + + +I G K + ++G
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
+ + M+ P+ + N +I C+ G L A++L EDM G SP++ TY ++I+GM
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
EA +++ +G P + YT LI+ + ++ +L +M + +P+
Sbjct: 691 SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 750
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHG 342
ITY ++ A+ G E +++ + +G+ P+++TY I+ G
Sbjct: 751 ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 188 bits (477), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 209/439 (47%), Gaps = 1/439 (0%)
Query: 137 AARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIG 196
A + ++A K P +C L+ L++ + K C+ ++ V G PDV I
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDV-VCKGVSPDVYLFTTAIN 268
Query: 197 GLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPP 256
CK G ++ AV L M +G +P+ +T+NT+I G+ G ++EA F + + +G P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 257 YLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVI 316
LITY++L++ + R A VL++M +G P++I YN+L+ + G + +
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 317 SNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKS 376
++S+G+ + TYNTLI +G D + +L+ M + ++ ++ LC
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 448
Query: 377 GLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTY 436
+ D A+ M+ + P TL+SGLCK G + ++L + T
Sbjct: 449 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 508
Query: 437 NIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHK 496
N + GL G ++ A + E++G+G V D +++++L G CG +L+EA L EM K
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 497 KDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKE 556
+ K + Y +I GL KV+ AIQ D R+ PD Y +I + +E
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 557 ANDLHQRLIEWKILKTEII 575
+ ++ + ++
Sbjct: 629 GQEFFDEMMSKNVQPNTVV 647
Score = 175 bits (443), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 208/452 (46%), Gaps = 2/452 (0%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
V D + + C G++ A +L M P+ + +I GL G+ D+
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 315
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
MV G P +IT ++++ GL + + A ++++M+ G P+ I YN +I
Sbjct: 316 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF 375
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
+ G+ N+A+ + KG TY LI+ C+ A A +L++M G +
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHG-YWDGVDDVLE 352
++ S++ +++ + +L R M P TLI L HG + ++ +
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 353 IMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEG 412
+N+ TR T N +L+GLC++G LD A + ++ C D V+YNTL+SG C +
Sbjct: 496 FLNKGFVVDTR-TSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554
Query: 413 FVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHS 472
+DE L + P TY+I I GL M +E A + + + G++PD T+S
Sbjct: 555 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 473 SLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRS 532
+ G C ++ EE E EM K+ + Y +I C+ ++ +A++ + M
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 674
Query: 533 RCKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
P+ Y +LIK ++ V+EA L + +
Sbjct: 675 GISPNSATYTSLIKGMSIISRVEEAKLLFEEM 706
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/439 (25%), Positives = 199/439 (45%), Gaps = 6/439 (1%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N ++ + G L A + ++M K + LI+G K GQ D +++ M+
Sbjct: 369 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 428
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
G + + VI LC SA+ V +M L SP T+I G+ G ++
Sbjct: 429 IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 488
Query: 242 AVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVS 301
A+ W L KG T L+ +C A + +++ GC D ++YN+L+S
Sbjct: 489 ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 548
Query: 302 FTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSP- 360
+ +E ++ + ++ RG++P+ TY+ LI L + + V++ ++ ++
Sbjct: 549 GCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN---MNKVEEAIQFWDDCKRNG 605
Query: 361 --PTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGI 418
P TY++M++G CK+ + + M+S++ P+ V YN L+ C+ G + +
Sbjct: 606 MLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMAL 665
Query: 419 QLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGF 478
+L + SP TY I G++ + +E AK L+ EM +G+ P+ +++L G+
Sbjct: 666 ELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGY 725
Query: 479 CGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDE 538
+ Q+ + LL+EMH K+ Y +I G + V A + L+ M PD
Sbjct: 726 GKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDS 785
Query: 539 KIYDALIKAVADSGMVKEA 557
Y I G V EA
Sbjct: 786 ITYKEFIYGYLKQGGVLEA 804
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 203/455 (44%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T + +++ L R+ A +++ M +K P+ NLI I+ G ++K +I ++M
Sbjct: 332 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 391
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
V G T N +I G CK G +A L+++M G + + ++ ++I + F
Sbjct: 392 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 451
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
+ A+ F + L + P T LI +C++ +ALE+ +G D T N+L
Sbjct: 452 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 511
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS 359
+ + G +E + + +L RG + V+YNTLI D L+ M +
Sbjct: 512 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 571
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQ 419
P TY+I++ GL ++ AI + PD+ TY+ ++ G CK +EG +
Sbjct: 572 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631
Query: 420 LLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFC 479
+ N P V YN I R G + A EL +M KGI P+ T++SL G
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 480 GVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEK 539
+ ++EEA L +EM + + Y +I G K ++ L M P++
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 751
Query: 540 IYDALIKAVADSGMVKEANDLHQRLIEWKILKTEI 574
Y +I A G V EA+ L + E I+ I
Sbjct: 752 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSI 786
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 176/428 (41%), Gaps = 10/428 (2%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T N +++ C G+ A RL++ M + S T++I L D + + M
Sbjct: 402 TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEM 461
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
++ P +I GLCK G A++L G D T N ++ G+ + G
Sbjct: 462 LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL 521
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
+EA K+ L +GC ++Y LI C A L++M G PD TY+ L
Sbjct: 522 DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL 581
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS 359
+ EE + GM P+ TY+ +I + + + M +
Sbjct: 582 ICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNV 641
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQ 419
P V YN ++ C+SG L A+ L M + P+ TY +L+ G+ V+E
Sbjct: 642 QPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKL 701
Query: 420 LLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFC 479
L + P + Y IDG ++G M + L EM K + P++IT++ + G+
Sbjct: 702 LFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYA 761
Query: 480 GVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEK 539
+ EA LL EM +K Y+ I G KQ V A + DE+
Sbjct: 762 RDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKG----------SDEE 811
Query: 540 IYDALIKA 547
Y A+I+
Sbjct: 812 NYAAIIEG 819
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 111/229 (48%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
++ D +T + ++ L ++ A + + R +P + + +I G K + ++G
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
+ + M+ P+ + N +I C+ G L A++L EDM G SP++ TY ++I+GM
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
EA +++ +G P + YT LI+ + ++ +L +M + +P+
Sbjct: 691 SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 750
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHG 342
ITY ++ A+ G E +++ + +G+ P+++TY I+ G
Sbjct: 751 ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 186/381 (48%)
Query: 165 KIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAI 224
K G ++K + + M+ SG +P +I G C+ ++ +L+ +M
Sbjct: 359 KEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPY 418
Query: 225 TYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDM 284
TY T+++GM G+ + A + K+ + GC P ++ YT LI+ + A+ VL++M
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 285 AMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYW 344
+G PDI YNSL+ +K +E + ++ G++PNA TY I +
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538
Query: 345 DGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTL 404
D ++ M E P +V ++N CK G + A S Y +MV + D TY L
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVL 598
Query: 405 LSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGI 464
++GL K VD+ ++ + G +P + +Y + I+G +++G+M+ A ++ EM+ +G+
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658
Query: 465 VPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQ 524
P+ I ++ L GFC ++E+A ELL EM K Y +I G CK + A +
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718
Query: 525 ALDLMVRSRCKPDEKIYDALI 545
D M PD +Y L+
Sbjct: 719 LFDEMKLKGLVPDSFVYTTLV 739
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/442 (25%), Positives = 208/442 (47%), Gaps = 12/442 (2%)
Query: 140 LIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLC 199
L+E+ R I + T +++G+ G +D I+ M+ SG P+V+ +I
Sbjct: 405 LVEMKKRNIVISPYTYGT-VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFL 463
Query: 200 KRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLI 259
+ A+ ++++M G +PD YN++I G+ +EA SF + + G P
Sbjct: 464 QNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAF 523
Query: 260 TYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNL 319
TY I A + +++M G P+ + L++ K+G E ++
Sbjct: 524 TYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSM 583
Query: 320 LSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS---PPTRVTYNIMLNGLCKS 376
+ +G+ +A TY L++ L + D VDD EI E P +Y +++NG K
Sbjct: 584 VDQGILGDAKTYTVLMNGLFKN---DKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKL 640
Query: 377 GLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTY 436
G + +A S++ MV E P+++ YN LL G C+ G +++ +LL ++ P VTY
Sbjct: 641 GNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTY 700
Query: 437 NIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHK 496
IDG + G + A L+ EM KG+VPD +++L G C ++ +E A+ + +K
Sbjct: 701 CTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNK 759
Query: 497 KDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRC----KPDEKIYDALIKAVADSG 552
K + +I + K K ++ + L+ ++ KP++ Y+ +I + G
Sbjct: 760 KGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEG 819
Query: 553 MVKEANDLHQRLIEWKILKTEI 574
++ A +L ++ ++ T I
Sbjct: 820 NLEAAKELFHQMQNANLMPTVI 841
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/457 (24%), Positives = 213/457 (46%), Gaps = 22/457 (4%)
Query: 100 ELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNL 159
E+V+ G +KP + FT + +A + ++ M +P+ CT L
Sbjct: 512 EMVENG--LKP------NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGL 563
Query: 160 IRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGC 219
I K G++ + C MV G + D T +++ GL K + A ++ +M G
Sbjct: 564 INEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623
Query: 220 SPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALE 279
+PD +Y +I G GN +A S + + + +G P +I Y +L+ CR +A E
Sbjct: 624 APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKE 683
Query: 280 VLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLS 339
+L++M+++G +P+ +TY +++ K G E + + + +G+ P++ Y TL+
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC 743
Query: 340 SHGYWDGVDDVLEIM--NETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESC--- 394
+ V+ + I N+ + +N ++N + K G + + + ++ S
Sbjct: 744 R---LNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRF 800
Query: 395 -FPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAK 453
P+ VTYN ++ LCKEG ++ +L + + N P ++TY ++G +MG
Sbjct: 801 GKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMF 860
Query: 454 ELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDE-----KIKHTAYRC 508
++ E I GI PD I +S + F +A+ L+ +M K+ K+ + R
Sbjct: 861 PVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRA 920
Query: 509 VILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALI 545
++ G K ++++A + ++ MVR + PD LI
Sbjct: 921 LLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELI 957
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 110/481 (22%), Positives = 197/481 (40%), Gaps = 46/481 (9%)
Query: 119 FTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINI 178
+T +++ +C+ G L A +++ M P+ T LI+ ++ + +++
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN 238
M G PD+ N +I GL K + A + +M +G P+A TY I G +
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537
Query: 239 FNEAVSFWKDQLRKGCPPYLITYTVLIELVCR------YCGAIRAL-------------- 278
F A + K+ G P + T LI C+ C A R++
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 279 ---------------EVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRG 323
E+ +M +G PD+ +Y L++ +K G ++ + ++ G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 324 MQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAI 383
+ PN + YN L+ G + ++L+ M+ P VTY +++G CKSG L A
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 384 SLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTN---CSPGLVTYNIAI 440
L+ M + PD Y TL+ G C+ V+ I + GTN C+ +N I
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF----GTNKKGCASSTAPFNALI 773
Query: 441 DGLARMGSMESAKELYSEMIGKGI----VPDEITHSSLAWGFCGVDQLEEAMELLKEMHK 496
+ + + G E E+ + ++ P+++T++ + C LE A EL +M
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN 833
Query: 497 KDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKE 556
+ Y ++ G K + D + + +PD +Y +I A GM +
Sbjct: 834 ANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTK 893
Query: 557 A 557
A
Sbjct: 894 A 894
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 170/401 (42%), Gaps = 4/401 (0%)
Query: 168 QIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYN 227
+D K+ M+ G VP T +++I GLCK L+ A L+ +M G S D TY+
Sbjct: 257 NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYS 316
Query: 228 TIIRGMFDKGNFNEAVSFWKDQLRKGC--PPYLITYTVLIELVCRYCGAIRALEVLEDMA 285
+I G+ N + A + + G PY+ Y I ++ + +A + + M
Sbjct: 317 LLIDGLLKGRNADAAKGLVHEMVSHGINIKPYM--YDCCICVMSKEGVMEKAKALFDGMI 374
Query: 286 MEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWD 345
G P Y SL+ ++ + Y ++ + R + + TY T++ + S G D
Sbjct: 375 ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD 434
Query: 346 GVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLL 405
G ++++ M + P V Y ++ ++ A+ + M + PDI YN+L+
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLI 494
Query: 406 SGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIV 465
GL K +DE L + P TY I G SA + EM G++
Sbjct: 495 IGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVL 554
Query: 466 PDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQA 525
P+++ + L +C ++ EA + M + Y ++ GL K KVD A +
Sbjct: 555 PNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI 614
Query: 526 LDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
M PD Y LI + G +++A+ + ++E
Sbjct: 615 FREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE 655
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 161/393 (40%), Gaps = 37/393 (9%)
Query: 198 LCKRGYLKSAVDLVEDM-------------------SLSGCSPDAITYNTIIRGMFDKGN 238
LC G + A+ +VE M G S D + + + G KG
Sbjct: 107 LCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGY 166
Query: 239 FNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNS 298
EAV + + P L VL++ + R+ +V + M D+ TY+
Sbjct: 167 IEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHM 226
Query: 299 LVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETS 358
L+ + G L L + T N DG + E M
Sbjct: 227 LIIAHCRAG---NVQLGKDVLFKTEKEFRTATLNV-----------DGALKLKESMICKG 272
Query: 359 SPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGI 418
P + TY+++++GLCK L+ A SL M S D TY+ L+ GL K D
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAK 332
Query: 419 QLLYLLT--GTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAW 476
L++ + G N P + Y+ I +++ G ME AK L+ MI G++P ++SL
Sbjct: 333 GLVHEMVSHGINIKPYM--YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIE 390
Query: 477 GFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKP 536
G+C + + ELL EM K++ I Y V+ G+C +D A + M+ S C+P
Sbjct: 391 GYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRP 450
Query: 537 DEKIYDALIKAVADSGMVKEANDLHQRLIEWKI 569
+ IY LIK + +A + + + E I
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGI 483
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 176/426 (41%), Gaps = 49/426 (11%)
Query: 150 IPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVD 209
+P C L+ L++ ++D + MV V DV T +M+I C+ G ++ D
Sbjct: 183 VPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKD 242
Query: 210 LVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVC 269
+ + T N + A+ + + KG P TY VLI+ +C
Sbjct: 243 --------------VLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLC 288
Query: 270 RYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAV 329
+ A +L +M G D TY+ L+I LL NA
Sbjct: 289 KIKRLEDAKSLLVEMDSLGVSLDNHTYS----------------LLIDGLLK---GRNAD 329
Query: 330 TYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTM 389
L+H + SHG + P Y+ + + K G++++A +L+ M
Sbjct: 330 AAKGLVHEMVSHG--------------INIKP--YMYDCCICVMSKEGVMEKAKALFDGM 373
Query: 390 VSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSM 449
++ P Y +L+ G C+E V +G +LL + N TY + G+ G +
Sbjct: 374 IASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDL 433
Query: 450 ESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCV 509
+ A + EMI G P+ + +++L F + +AM +LKEM ++ Y +
Sbjct: 434 DGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSL 493
Query: 510 ILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKI 569
I+GL K +++D A L MV + KP+ Y A I ++ A+ + + E +
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553
Query: 570 LKTEII 575
L +++
Sbjct: 554 LPNKVL 559
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 141/349 (40%), Gaps = 51/349 (14%)
Query: 105 GKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLI 164
GK + P D F+ ++ G + A+ + + M + P+ L+ G
Sbjct: 620 GKGIAP------DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFC 673
Query: 165 KIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAI 224
+ G+I+K ++++ M + G P+ +T +I G CK G L A L ++M L G PD+
Sbjct: 674 RSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSF 733
Query: 225 TYNTIIRGMFDKGNFNEAVSFWKDQLRKGCP----------------------------- 255
Y T++ G + A++ + +KGC
Sbjct: 734 VYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRL 792
Query: 256 ----------PYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAK 305
P +TY ++I+ +C+ A E+ M P +ITY SL++ K
Sbjct: 793 MDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDK 852
Query: 306 QGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVT 365
G E + V ++ G++P+ + Y+ +I++ G +++ M ++
Sbjct: 853 MGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCK 912
Query: 366 YNI-----MLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLC 409
+I +L+G K G ++ A + MV PD T L++ C
Sbjct: 913 LSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/449 (27%), Positives = 203/449 (45%), Gaps = 35/449 (7%)
Query: 132 GRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITC 191
G R+ + M +K SC + K +ID +I MV SG V +
Sbjct: 168 GMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSL 227
Query: 192 NMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLR 251
+V+ GLC+RG ++ + L+++ S+ G P+A TYNTII + +F+ K +
Sbjct: 228 TIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKK 287
Query: 252 KGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEE 311
G +TYT+L+EL + A ++ ++M G D+ Y SL+S+ ++G +
Sbjct: 288 DGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKR 347
Query: 312 TYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLN 371
+L+ L +G+ P++ TY LI + G + ++ M T+V +N +++
Sbjct: 348 AFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLID 407
Query: 372 GLCKSGLLDRAISLYSTMVSE-------------SCFPDI-------------------- 398
G C+ G++D A +Y M + SCF +
Sbjct: 408 GYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKL 467
Query: 399 --VTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELY 456
V+Y L+ CKEG V+E +L ++ P +TYN+ I + G ++ A++L
Sbjct: 468 STVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLR 527
Query: 457 SEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQ 516
+ M G+ PD T++SL G C D ++EAM L EM K Y +I GL K
Sbjct: 528 ANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKA 587
Query: 517 RKVDIAIQALDLMVRSRCKPDEKIYDALI 545
K D A D M R D K+Y ALI
Sbjct: 588 GKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 176/388 (45%), Gaps = 2/388 (0%)
Query: 124 ILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSG 183
+++ LC RG + + +LI+ + K P + +I +K ++ +M G
Sbjct: 230 VVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDG 289
Query: 184 GVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAV 243
V + +T +++ K G + A L ++M G D Y ++I KGN A
Sbjct: 290 VVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAF 349
Query: 244 SFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVL-EDMAMEGCYPDIITYNSLVSF 302
+ + KG P TY LI+ VC+ G + A E+L +M +G + +N+L+
Sbjct: 350 LLFDELTEKGLSPSSYTYGALIDGVCK-VGEMGAAEILMNEMQSKGVNITQVVFNTLIDG 408
Query: 303 TAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPT 362
++G+ +E ++ + +G Q + T NT+ + +D L M E +
Sbjct: 409 YCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLS 468
Query: 363 RVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLY 422
V+Y +++ CK G ++ A L+ M S+ P+ +TYN ++ CK+G + E +L
Sbjct: 469 TVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRA 528
Query: 423 LLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVD 482
+ P TY I G +++ A L+SEM KG+ + +T++ + G
Sbjct: 529 NMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAG 588
Query: 483 QLEEAMELLKEMHKKDEKIKHTAYRCVI 510
+ +EA L EM +K I + Y +I
Sbjct: 589 KSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 165/378 (43%), Gaps = 2/378 (0%)
Query: 99 GELVDPGKPVKPPPF--VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSC 156
GE+ K +K ++ + +T N I+ + ++++M + + + +
Sbjct: 238 GEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTY 297
Query: 157 TNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSL 216
T L+ +K G++ K+ + M G DV +I C++G +K A L ++++
Sbjct: 298 TLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTE 357
Query: 217 SGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIR 276
G SP + TY +I G+ G A + KG + + LI+ CR
Sbjct: 358 KGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDE 417
Query: 277 ALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIH 336
A + + M +G D+ T N++ S + Y+E + ++ G++ + V+Y LI
Sbjct: 418 ASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLID 477
Query: 337 SLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFP 396
G + + M+ P +TYN+M+ CK G + A L + M + P
Sbjct: 478 VYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDP 537
Query: 397 DIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELY 456
D TY +L+ G C VDE ++L + VTY + I GL++ G + A LY
Sbjct: 538 DSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLY 597
Query: 457 SEMIGKGIVPDEITHSSL 474
EM KG D +++L
Sbjct: 598 DEMKRKGYTIDNKVYTAL 615
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 6/283 (2%)
Query: 129 CTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDV 188
C +G + A L + + K P + LI G+ K+G++ ++N M G
Sbjct: 340 CRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQ 399
Query: 189 ITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKD 248
+ N +I G C++G + A + + M G D T NTI ++EA +
Sbjct: 400 VVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFR 459
Query: 249 QLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGV 308
+ G ++YT LI++ C+ A + +M+ +G P+ ITYN ++ KQG
Sbjct: 460 MMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGK 519
Query: 309 YEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSP---PTRVT 365
+E + +N+ + GM P++ TY +LIH D VD+ + + +E VT
Sbjct: 520 IKEARKLRANMEANGMDPDSYTYTSLIHG---ECIADNVDEAMRLFSEMGLKGLDQNSVT 576
Query: 366 YNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGL 408
Y +M++GL K+G D A LY M + D Y L+ +
Sbjct: 577 YTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 102/257 (39%), Gaps = 35/257 (13%)
Query: 119 FTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINI 178
+T ++ +C G + AA L+ M K LI G + G +D+ I ++
Sbjct: 365 YTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDV 424
Query: 179 MVMSGGVPDVITCN---------------------MVIGGL--------------CKRGY 203
M G DV TCN M+ GG+ CK G
Sbjct: 425 MEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGN 484
Query: 204 LKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTV 263
++ A L +MS G P+AITYN +I +G EA + G P TYT
Sbjct: 485 VEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTS 544
Query: 264 LIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRG 323
LI C A+ + +M ++G + +TY ++S +K G +E + + + +G
Sbjct: 545 LIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKG 604
Query: 324 MQPNAVTYNTLIHSLSS 340
+ Y LI S+ S
Sbjct: 605 YTIDNKVYTALIGSMHS 621
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 142/500 (28%), Positives = 242/500 (48%), Gaps = 22/500 (4%)
Query: 67 QCRSFQGSAVIDRVNEVDHEDWGLESFERRESGELVDPGKPVKPPPFVRNDGFTNNKILQ 126
CRSF I R + E+ L +RR +L P+K +V + + +
Sbjct: 18 NCRSFSS---IKRPQIPESEETSLSITQRRFDPDLA----PIKTRVYVS----LFHTLFR 66
Query: 127 NLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQI-DKGCKIINIMVMSGGV 185
+ RL AAR + M +P +LI G + D+ I + M+ G
Sbjct: 67 LYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVS 126
Query: 186 PDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSF 245
PDV N++I CK G L A+ L+ + +S D +TYNT+I G+ + G +EA F
Sbjct: 127 PDVFALNVLIHSFCKVGRLSFAISLLRNRVIS---IDTVTYNTVISGLCEHGLADEAYQF 183
Query: 246 WKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAK 305
+ ++ G P ++Y LI+ C+ +RA ++++++ ++IT+ L+S
Sbjct: 184 LSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEIS----ELNLITHTILLSSYYN 239
Query: 306 QGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVT 365
EE Y +++ G P+ VT++++I+ L G +L M E S P VT
Sbjct: 240 LHAIEEAY---RDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVT 296
Query: 366 YNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLT 425
Y +++ L K+ + A++LYS MV D+V Y L+ GL K G + E + +L
Sbjct: 297 YTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLL 356
Query: 426 GTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLE 485
N P +VTY +DGL + G + SA+ + ++M+ K ++P+ +T+SS+ G+ LE
Sbjct: 357 EDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLE 416
Query: 486 EAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALI 545
EA+ LL++M ++ Y VI GL K K ++AI+ M + + I DAL+
Sbjct: 417 EAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALV 476
Query: 546 KAVADSGMVKEANDLHQRLI 565
+ G +KE L + ++
Sbjct: 477 NHLKRIGRIKEVKGLVKDMV 496
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 195/399 (48%), Gaps = 14/399 (3%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCT--NLIRGLIKIGQIDK 171
V D F N ++ + C GRL A L+ ++++ + T +I GL + G D+
Sbjct: 125 VSPDVFALNVLIHSFCKVGRLSFAISLL-----RNRVISIDTVTYNTVISGLCEHGLADE 179
Query: 172 GCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIR 231
+ ++ MV G +PD ++ N +I G CK G A LV+++S + IT+ ++
Sbjct: 180 AYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEIS----ELNLITHTILLS 235
Query: 232 GMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYP 291
++ EA ++D + G P ++T++ +I +C+ + +L +M YP
Sbjct: 236 SYYNLHAIEEA---YRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYP 292
Query: 292 DIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVL 351
+ +TY +LV K +Y + S ++ RG+ + V Y L+ L G +
Sbjct: 293 NHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTF 352
Query: 352 EIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKE 411
+++ E + P VTY +++GLCK+G L A + + M+ +S P++VTY+++++G K+
Sbjct: 353 KMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKK 412
Query: 412 GFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITH 471
G ++E + LL + N P TY IDGL + G E A EL EM G+ +
Sbjct: 413 GMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYIL 472
Query: 472 SSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVI 510
+L + +++E L+K+M K + Y +I
Sbjct: 473 DALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLI 511
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 183/400 (45%), Gaps = 7/400 (1%)
Query: 121 NNKILQNLCTR----GRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
NN IL L GR+ L++ M K + T+LI K G +
Sbjct: 468 NNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWA 527
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLV-EDMSLSGCSPDAITYNTIIRGMFD 235
M G DV++ N++I G+ K G K D + M G PD T+N ++
Sbjct: 528 EEMQERGMPWDVVSYNVLISGMLKFG--KVGADWAYKGMREKGIEPDIATFNIMMNSQRK 585
Query: 236 KGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIIT 295
+G+ + W G P L++ +++ ++C A+ +L M + +P++ T
Sbjct: 586 QGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTT 645
Query: 296 YNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMN 355
Y + ++K + + LLS G++ + YNTLI +L G V+ M
Sbjct: 646 YRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDME 705
Query: 356 ETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVD 415
P VT+N +++G + +A+S YS M+ P++ TYNT++ GL G +
Sbjct: 706 ARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIK 765
Query: 416 EGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLA 475
E + L + P TYN I G A++G+M+ + +Y EMI G+VP T++ L
Sbjct: 766 EVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLI 825
Query: 476 WGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCK 515
F V ++ +A ELLKEM K+ + Y +I GLCK
Sbjct: 826 SEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 865
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/478 (25%), Positives = 202/478 (42%), Gaps = 38/478 (7%)
Query: 124 ILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSG 183
++ L G L A + +++ +Q+P+ + T L+ GL K G + II M+
Sbjct: 335 LMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKS 394
Query: 184 GVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAV 243
+P+V+T + +I G K+G L+ AV L+ M P+ TY T+I G+F G A+
Sbjct: 395 VIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAI 454
Query: 244 SFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALE-VLEDMAMEGCYPDIITYNSLVSF 302
K+ G L+ + R G I+ ++ +++DM +G D I Y SL+
Sbjct: 455 ELSKEMRLIGVEENNYILDALVNHLKR-IGRIKEVKGLVKDMVSKGVTLDQINYTSLIDV 513
Query: 303 TAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPT 362
K G E + RGM + V+YN LI + G G D + M E P
Sbjct: 514 FFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPD 572
Query: 363 RVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLY 422
T+NIM+N K G + + L+ M S P +++ N ++ LC+ G ++E I +L
Sbjct: 573 IATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILN 632
Query: 423 LLTGTNCSPGLVTYNIAIDG-----------------------------------LARMG 447
+ P L TY I +D L ++G
Sbjct: 633 QMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLG 692
Query: 448 SMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYR 507
+ A + +M +G +PD +T +SL G+ + +A+ M + Y
Sbjct: 693 MTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYN 752
Query: 508 CVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLI 565
+I GL + + L M +PD+ Y+ALI A G +K + ++ +I
Sbjct: 753 TIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMI 810
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 115/540 (21%), Positives = 211/540 (39%), Gaps = 101/540 (18%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T N ++ LC G A + + M + +P S LI G K+G + ++
Sbjct: 160 DTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALV 219
Query: 177 N----------------------------IMVMSGGVPDVITCNMVIGGLCKRGYLKSAV 208
+ MVMSG PDV+T + +I LCK G +
Sbjct: 220 DEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGG 279
Query: 209 DLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCP------------- 255
L+ +M P+ +TY T++ +F + A++ + + +G P
Sbjct: 280 LLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGL 339
Query: 256 ----------------------PYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
P ++TYT L++ +C+ A ++ M + P++
Sbjct: 340 FKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNV 399
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
+TY+S+++ K+G+ EE ++ + + + PN TY T+I L G + ++ +
Sbjct: 400 VTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKE 459
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVS---------------------- 391
M + ++N L + G + L MVS
Sbjct: 460 MRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGD 519
Query: 392 ------------ESCFP-DIVTYNTLLSGLCKEGFVDEGIQLLYL-LTGTNCSPGLVTYN 437
E P D+V+YN L+SG+ K G V G Y + P + T+N
Sbjct: 520 EEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV--GADWAYKGMREKGIEPDIATFN 577
Query: 438 IAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKK 497
I ++ + G E +L+ +M GI P ++ + + C ++EEA+ +L +M
Sbjct: 578 IMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLM 637
Query: 498 DEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
+ T YR + K ++ D + + ++ K ++Y+ LI + GM K+A
Sbjct: 638 EIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKA 697
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 155/367 (42%), Gaps = 13/367 (3%)
Query: 144 MARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGY 203
M K P + ++ K G + K+ + M G P +++CN+V+G LC+ G
Sbjct: 564 MREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGK 623
Query: 204 LKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTV 263
++ A+ ++ M L P+ TY + + + L G Y
Sbjct: 624 MEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNT 683
Query: 264 LIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRG 323
LI +C+ +A V+ DM G PD +T+NSL+ + S ++ G
Sbjct: 684 LIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAG 743
Query: 324 MQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAI 383
+ PN TYNT+I LS G VD L M P TYN +++G K G + ++
Sbjct: 744 ISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSM 803
Query: 384 SLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGL 443
++Y M+++ P TYN L+S G + + +LL + SP TY I GL
Sbjct: 804 TIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGL 863
Query: 444 ARMGS------------MESAKELYSEMI-GKGIVPDEITHSSLAWGFCGVDQLEEAMEL 490
++ + + AK L EM+ KG +P T ++ F +A
Sbjct: 864 CKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYIPCNQTIYWISAAFSKPGMKVDAERF 923
Query: 491 LKEMHKK 497
LKE +KK
Sbjct: 924 LKECYKK 930
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 66/156 (42%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T N ++ + A +M P+ + +IRGL G I + K +
Sbjct: 712 DTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWL 771
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
+ M G PD T N +I G K G +K ++ + +M G P TYN +I +
Sbjct: 772 SEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANV 831
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYC 272
G +A K+ ++G P TY +I +C+ C
Sbjct: 832 GKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLC 867
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
Query: 455 LYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLC 514
+YS+MI G+ PD + L FC V +L A+ LL+ + I Y VI GLC
Sbjct: 116 IYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRN---RVISIDTVTYNTVISGLC 172
Query: 515 KQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKILKTEI 574
+ D A Q L MV+ PD Y+ LI G A L + E ++ I
Sbjct: 173 EHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTI 232
Query: 575 I 575
+
Sbjct: 233 L 233
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 207/442 (46%), Gaps = 9/442 (2%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N +L L R+ + M R P+ + L++ L K ++D K++ M
Sbjct: 150 NHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSN 209
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
G PD ++ VI +C+ G +K +L E P YN +I G+ + ++
Sbjct: 210 KGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE-----PVVSVYNALINGLCKEHDYKG 264
Query: 242 AVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVS 301
A ++ + KG P +I+Y+ LI ++C A L M GC+P+I T +SLV
Sbjct: 265 AFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVK 324
Query: 302 FTAKQGVYEETYLVISNLLSRG--MQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS 359
+G + L + N + RG +QPN V YNTL+ SHG V M E
Sbjct: 325 GCFLRGTTFDA-LDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGC 383
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQ 419
P TY ++NG K G LD A+ +++ M++ C P++V Y ++ LC+ E
Sbjct: 384 SPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAES 443
Query: 420 LLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEI-THSSLAWGF 478
L+ +++ NC+P + T+N I GL G ++ A++++ +M + P I T++ L G
Sbjct: 444 LIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGL 503
Query: 479 CGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDE 538
+++EEA L +E+ + + + Y ++ G C IA+Q + M+ PDE
Sbjct: 504 AKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDE 563
Query: 539 KIYDALIKAVADSGMVKEANDL 560
+ +I A G + A +
Sbjct: 564 ITMNMIILAYCKQGKAERAAQM 585
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 131/458 (28%), Positives = 215/458 (46%), Gaps = 9/458 (1%)
Query: 119 FTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINI 178
FT N +L+ LC ++ A +L+ M+ K P S T +I + ++G + +G ++
Sbjct: 182 FTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAER 241
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN 238
P V N +I GLCK K A +L+ +M G SP+ I+Y+T+I + + G
Sbjct: 242 FE-----PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQ 296
Query: 239 FNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAME-GCYPDIITYN 297
A SF L++GC P + T + L++ AL++ M G P+++ YN
Sbjct: 297 IELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYN 356
Query: 298 SLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNET 357
+LV G + V S++ G PN TY +LI+ + G DG + M +
Sbjct: 357 TLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTS 416
Query: 358 SSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEG 417
P V Y M+ LC+ A SL M E+C P + T+N + GLC G +D
Sbjct: 417 GCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWA 476
Query: 418 IQLLYLLTGTN-CSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAW 476
++ + + C P +VTYN +DGLA+ +E A L E+ +G+ T+++L
Sbjct: 477 EKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLH 536
Query: 477 GFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMV--RSRC 534
G C A++L+ +M + +IL CKQ K + A Q LDL+ R +
Sbjct: 537 GSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKW 596
Query: 535 KPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKILKT 572
+PD Y +I + S ++ L +R+I I+ +
Sbjct: 597 RPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPS 634
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 163/351 (46%), Gaps = 4/351 (1%)
Query: 128 LCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGV-P 186
LC G++ A + M ++ P+ + ++L++G G + N M+ G+ P
Sbjct: 291 LCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQP 350
Query: 187 DVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFW 246
+V+ N ++ G C G + AV + M GCSP+ TY ++I G +G+ + AV W
Sbjct: 351 NVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIW 410
Query: 247 KDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQ 306
L GC P ++ YT ++E +CR+ A ++E M+ E C P + T+N+ +
Sbjct: 411 NKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDA 470
Query: 307 GVYEETYLVISNLLSRGM-QPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVT 365
G + V + + PN VTYN L+ L+ + + + + T
Sbjct: 471 GRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSST 530
Query: 366 YNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLT 425
YN +L+G C +GL A+ L M+ + PD +T N ++ CK+G + Q+L L++
Sbjct: 531 YNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVS 590
Query: 426 --GTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSL 474
P +++Y I GL R E L MI GIVP T S L
Sbjct: 591 CGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVL 641
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 168/423 (39%), Gaps = 63/423 (14%)
Query: 169 IDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAV---DLVEDMSLSGCSPDAIT 225
+ +GC ++ + V +P V+ N+ + L + + D+V+ + C P A+
Sbjct: 3 LKEGCSLL-LKVQKPLIPFVLNTNLNVNHLLTESPNHAEIKELDVVKRLRQESCVPLALH 61
Query: 226 YNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMA 285
+ S L K P +T+ V+I + +L+ M
Sbjct: 62 FFK---------------SIANSNLFKHTP---LTFEVMIRKLAMDGQVDSVQYLLQQMK 103
Query: 286 MEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWD 345
++G + + S++S + G+ E + + G P+ YN ++ +L
Sbjct: 104 LQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQ 163
Query: 346 GVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLL 405
+ V M P TYN++L LCK+ +D A L M ++ C PD V+Y T++
Sbjct: 164 MIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVI 223
Query: 406 SGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIV 465
S +C+ G V EG +L P + YN I+GL + + A EL EM+ KGI
Sbjct: 224 SSMCEVGLVKEGREL-----AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGIS 278
Query: 466 PDEITHSSLAWGFCGVDQLEEAMELLKEMHKK---------------------------- 497
P+ I++S+L C Q+E A L +M K+
Sbjct: 279 PNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDL 338
Query: 498 -DEKIKH-------TAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVA 549
++ I+ AY ++ G C + A+ M C P+ + Y +LI A
Sbjct: 339 WNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFA 398
Query: 550 DSG 552
G
Sbjct: 399 KRG 401
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 128/308 (41%), Gaps = 22/308 (7%)
Query: 275 IRALEVLEDMAMEGCYP-----------------DIITYNSLVSFTAKQGVYEETYLVIS 317
I+ L+V++ + E C P +T+ ++ A G + ++
Sbjct: 41 IKELDVVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQ 100
Query: 318 NLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSG 377
+ +G + + ++I G + ++ + E P+ YN +L+ L
Sbjct: 101 QMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGEN 160
Query: 378 LLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYN 437
+ +Y M + P++ TYN LL LCK VD +LL ++ C P V+Y
Sbjct: 161 RIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYT 220
Query: 438 IAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKK 497
I + +G ++ +EL + P +++L G C + A EL++EM +K
Sbjct: 221 TVISSMCEVGLVKEGREL-----AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEK 275
Query: 498 DEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
+Y +I LC ++++A L M++ C P+ +L+K G +A
Sbjct: 276 GISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDA 335
Query: 558 NDLHQRLI 565
DL ++I
Sbjct: 336 LDLWNQMI 343
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 204/406 (50%), Gaps = 5/406 (1%)
Query: 155 SCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDM 214
SC L+ L+K + + M+ P+V T N+VI LCK G + A D++EDM
Sbjct: 190 SCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDM 249
Query: 215 SLSGCSPDAITYNTIIRG---MFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRY 271
+ GCSP+ ++YNT+I G + G +A + K+ + P L T+ +LI+ +
Sbjct: 250 KVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKD 309
Query: 272 CGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTY 331
+++V ++M + P++I+YNSL++ G E + ++S G+QPN +TY
Sbjct: 310 DNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITY 369
Query: 332 NTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVS 391
N LI+ + D+ + + PT YN++++ CK G +D +L M
Sbjct: 370 NALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMER 429
Query: 392 ESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMES 451
E PD+ TYN L++GLC+ G ++ +L LT P LVT++I ++G R G
Sbjct: 430 EGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRK 488
Query: 452 AKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDE-KIKHTAYRCVI 510
A L EM G+ P +T++ + G+C L+ A + +M K+ ++ +Y ++
Sbjct: 489 AAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLL 548
Query: 511 LGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKE 556
G ++ K++ A L+ M+ P+ Y+ + + + D G V +
Sbjct: 549 QGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPD 594
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 194/400 (48%), Gaps = 14/400 (3%)
Query: 189 ITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKD 248
++C ++ L K + ++M P+ T+N +I + G N+A +D
Sbjct: 189 LSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMED 248
Query: 249 QLRKGCPPYLITYTVLIELVCRYCG---AIRALEVLEDMAMEGCYPDIITYNSLVSFTAK 305
GC P +++Y LI+ C+ G +A VL++M P++ T+N L+ K
Sbjct: 249 MKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWK 308
Query: 306 QGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVT 365
+ V +L + ++PN ++YN+LI+ L + G + + M P +T
Sbjct: 309 DDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLIT 368
Query: 366 YNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLT 425
YN ++NG CK+ +L A+ ++ ++ + P YN L+ CK G +D+G L +
Sbjct: 369 YNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEME 428
Query: 426 GTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLE 485
P + TYN I GL R G++E+AK+L+ ++ KG+ PD +T L G+C +
Sbjct: 429 REGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESR 487
Query: 486 EAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRS-RCKPDEKIYDAL 544
+A LLKEM K K +H Y V+ G CK+ + A M + R + + Y+ L
Sbjct: 488 KAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVL 547
Query: 545 IKAVADSGMVKEANDLHQRLIE---------WKILKTEII 575
++ + G +++AN L ++E ++I+K E++
Sbjct: 548 LQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMV 587
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 172/357 (48%), Gaps = 5/357 (1%)
Query: 119 FTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKI---GQIDKGCKI 175
FT N ++ LC G++ A ++E M P+ S LI G K+ G++ K +
Sbjct: 224 FTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAV 283
Query: 176 INIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFD 235
+ MV + P++ T N++I G K L ++ + ++M P+ I+YN++I G+ +
Sbjct: 284 LKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCN 343
Query: 236 KGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIIT 295
G +EA+S + G P LITY LI C+ AL++ + +G P
Sbjct: 344 GGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRM 403
Query: 296 YNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMN 355
YN L+ K G ++ + + + G+ P+ TYN LI L +G + + + +
Sbjct: 404 YNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT 463
Query: 356 ETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVD 415
+ P VT++I++ G C+ G +A L M P +TYN ++ G CKEG +
Sbjct: 464 -SKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLK 522
Query: 416 EGIQLLYLLTGT-NCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITH 471
+ + + +YN+ + G ++ G +E A L +EM+ KG+VP+ IT+
Sbjct: 523 AATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 185/360 (51%), Gaps = 6/360 (1%)
Query: 142 EIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCK- 200
E++ RK Q P+ + +I L K G+++K ++ M + G P+V++ N +I G CK
Sbjct: 213 EMIRRKIQ-PNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKL 271
Query: 201 --RGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYL 258
G + A ++++M + SP+ T+N +I G + N ++ +K+ L + P +
Sbjct: 272 GGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNV 331
Query: 259 ITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISN 318
I+Y LI +C A+ + + M G P++ITYN+L++ K + +E + +
Sbjct: 332 ISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGS 391
Query: 319 LLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGL 378
+ +G P YN LI + G D + E M P TYN ++ GLC++G
Sbjct: 392 VKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGN 451
Query: 379 LDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNI 438
++ A L+ + S+ PD+VT++ L+ G C++G + LL ++ P +TYNI
Sbjct: 452 IEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNI 510
Query: 439 AIDGLARMGSMESAKELYSEMIG-KGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKK 497
+ G + G++++A + ++M + + + +++ L G+ +LE+A LL EM +K
Sbjct: 511 VMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEK 570
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 153/341 (44%), Gaps = 18/341 (5%)
Query: 132 GRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITC 191
G++ A +++ M P+ + LI G K + K+ M+ P+VI+
Sbjct: 275 GKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISY 334
Query: 192 NMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLR 251
N +I GLC G + A+ + + M +G P+ ITYN +I G EA+ +
Sbjct: 335 NSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKG 394
Query: 252 KGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEE 311
+G P Y +LI+ C+ + E+M EG PD+ TYN L++ + G E
Sbjct: 395 QGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEA 454
Query: 312 TYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLN 371
+ L S+G+ P+ VT++ L+ G +L+ M++ P +TYNI++
Sbjct: 455 AKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMK 513
Query: 372 GLCKSGLLDRAISLYSTMVSESCFP-DIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCS 430
G CK G L A ++ + M E ++ +YN LL G ++G +++ LL +
Sbjct: 514 GYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLV 573
Query: 431 PGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITH 471
P +TY I + EM+ +G VPD H
Sbjct: 574 PNRITYEIVKE----------------EMVDQGFVPDIEGH 598
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 138/296 (46%), Gaps = 2/296 (0%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T N ++ L + ++ + M + P+ S +LI GL G+I + + + M
Sbjct: 298 TFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKM 357
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
V +G P++IT N +I G CK LK A+D+ + G P YN +I G
Sbjct: 358 VSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKI 417
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
++ + ++ R+G P + TY LI +CR G I A + L D PD++T++ L
Sbjct: 418 DDGFALKEEMEREGIVPDVGTYNCLIAGLCRN-GNIEAAKKLFDQLTSKGLPDLVTFHIL 476
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS 359
+ ++G + +++ + G++P +TYN ++ G ++ M +
Sbjct: 477 MEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERR 536
Query: 360 PPTRV-TYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFV 414
V +YN++L G + G L+ A L + M+ + P+ +TY + + +GFV
Sbjct: 537 LRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFV 592
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 120/267 (44%), Gaps = 2/267 (0%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
V+ + + N ++ LC G++ A + + M P+ + LI G K + +
Sbjct: 327 VKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEAL 386
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
+ + G VP NM+I CK G + L E+M G PD TYN +I G+
Sbjct: 387 DMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGL 446
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
GN A + DQL P L+T+ +L+E CR + +A +L++M+ G P
Sbjct: 447 CRNGNIEAAKKLF-DQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRH 505
Query: 294 ITYNSLVSFTAKQG-VYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLE 352
+TYN ++ K+G + T + R ++ N +YN L+ S G + + +L
Sbjct: 506 LTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLN 565
Query: 353 IMNETSSPPTRVTYNIMLNGLCKSGLL 379
M E P R+TY I+ + G +
Sbjct: 566 EMLEKGLVPNRITYEIVKEEMVDQGFV 592
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 125/248 (50%), Gaps = 9/248 (3%)
Query: 323 GMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRA 382
G + +A++ L+ +L V+ V + M P T+N+++N LCK+G +++A
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 383 ISLYSTMVSESCFPDIVTYNTLLSGLCK---EGFVDEGIQLLYLLTGTNCSPGLVTYNIA 439
+ M C P++V+YNTL+ G CK G + + +L + + SP L T+NI
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNIL 302
Query: 440 IDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDE 499
IDG + ++ + +++ EM+ + + P+ I+++SL G C ++ EA+ + +M
Sbjct: 303 IDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGV 362
Query: 500 KIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCK---PDEKIYDALIKAVADSGMVKE 556
+ Y +I G CK D+ +ALD+ + + P ++Y+ LI A G + +
Sbjct: 363 QPNLITYNALINGFCKN---DMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDD 419
Query: 557 ANDLHQRL 564
L + +
Sbjct: 420 GFALKEEM 427
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 212/442 (47%), Gaps = 3/442 (0%)
Query: 125 LQNLCTRGRLMAAARLI--EIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMS 182
L +L + R + AR + E+ R + ++ +C L++G+ G+++ G K+I
Sbjct: 176 LLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCI-LVKGMCNEGKVEVGRKLIEGRWGK 234
Query: 183 GGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEA 242
G +P+++ N +IGG CK G +++A + +++ L G P T+ T+I G +G+F +
Sbjct: 235 GCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVAS 294
Query: 243 VSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSF 302
+ +G + +I+ R+ + E + + C PD+ TYN L++
Sbjct: 295 DRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINR 354
Query: 303 TAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPT 362
K+G E + +G+ PN ++Y LI + +D +L M E P
Sbjct: 355 LCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPD 414
Query: 363 RVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLY 422
VTY I+++GL SG +D A+++ ++ PD YN L+SGLCK G L
Sbjct: 415 IVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFS 474
Query: 423 LLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVD 482
+ N P Y IDG R G + A++++S + KG+ D + H+++ GFC
Sbjct: 475 EMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSG 534
Query: 483 QLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYD 542
L+EA+ + M+++ Y +I G KQ+ + AI+ M +++CKP+ Y
Sbjct: 535 MLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYT 594
Query: 543 ALIKAVADSGMVKEANDLHQRL 564
+LI G K A + + +
Sbjct: 595 SLINGFCCQGDFKMAEETFKEM 616
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/500 (24%), Positives = 219/500 (43%), Gaps = 49/500 (9%)
Query: 95 RRESGELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFP 154
R+ E+ D G V D ++ +++ +C G++ +LIE K IP+
Sbjct: 190 RKVYDEMCDRGDSV--------DNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIV 241
Query: 155 SCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDM 214
+I G K+G I+ + + + G +P + T +I G CK G ++ L+ ++
Sbjct: 242 FYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEV 301
Query: 215 SLSG-----------------------------------CSPDAITYNTIIRGMFDKGNF 239
G C PD TYN +I + +G
Sbjct: 302 KERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKK 361
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
AV F + +KG P ++Y LI+ C+ A ++L MA GC PDI+TY L
Sbjct: 362 EVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGIL 421
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS 359
+ G ++ + L+ RG+ P+A YN L+ L G + + M + +
Sbjct: 422 IHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNI 481
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQ 419
P Y +++G +SG D A ++S V + D+V +N ++ G C+ G +DE +
Sbjct: 482 LPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALA 541
Query: 420 LLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFC 479
+ + + P TY+ IDG + M +A +++ M P+ +T++SL GFC
Sbjct: 542 CMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFC 601
Query: 480 GVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRK-VDIAIQALDLMVRSRCKPDE 538
+ A E KEM +D Y +I L K+ ++ A+ +LM+ ++C P+E
Sbjct: 602 CQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNE 661
Query: 539 KIYDALIKAVADSGMVKEAN 558
++ L++ G VK+ +
Sbjct: 662 VTFNCLLQ-----GFVKKTS 676
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 195/436 (44%), Gaps = 6/436 (1%)
Query: 124 ILQNLCTRGRLMAAARLIE-IMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMS 182
+L G L A + + ++ +P +C +L+ L+K ++ K+ + M
Sbjct: 140 VLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDR 199
Query: 183 GGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEA 242
G D + +++ G+C G ++ L+E GC P+ + YNTII G G+ A
Sbjct: 200 GDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENA 259
Query: 243 VSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSF 302
+K+ KG P L T+ +I C+ + + +L ++ G + N+++
Sbjct: 260 YLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDA 319
Query: 303 TAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPT 362
+ G + I +++ +P+ TYN LI+ L G + L+ ++ P
Sbjct: 320 KYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPN 379
Query: 363 RVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLY 422
++Y ++ CKS D A L M C PDIVTY L+ GL G +D+ + +
Sbjct: 380 NLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKV 439
Query: 423 LLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVD 482
L SP YN+ + GL + G AK L+SEM+ + I+PD +++L GF
Sbjct: 440 KLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSG 499
Query: 483 QLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYD 542
+EA ++ +K K+ + +I G C+ +D A+ ++ M PD+ Y
Sbjct: 500 DFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYS 559
Query: 543 ALIKAVADSGMVKEAN 558
+I G VK+ +
Sbjct: 560 TII-----DGYVKQQD 570
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 188/411 (45%), Gaps = 1/411 (0%)
Query: 157 TNLIRGLIKIGQIDKGCKIINIMV-MSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMS 215
++++ + G + K +I + +V + VPDVI CN ++ L K L A + ++M
Sbjct: 138 SHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMC 197
Query: 216 LSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAI 275
G S D + +++GM ++G + + KGC P ++ Y +I C+
Sbjct: 198 DRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIE 257
Query: 276 RALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLI 335
A V +++ ++G P + T+ ++++ K+G + + ++S + RG++ + N +I
Sbjct: 258 NAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNII 317
Query: 336 HSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCF 395
+ HGY + + + P TYNI++N LCK G + A+ +
Sbjct: 318 DAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLI 377
Query: 396 PDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKEL 455
P+ ++Y L+ CK D +LL + C P +VTY I I GL G M+ A +
Sbjct: 378 PNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNM 437
Query: 456 YSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCK 515
++I +G+ PD ++ L G C + A L EM ++ Y +I G +
Sbjct: 438 KVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIR 497
Query: 516 QRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
D A + L V K D ++A+IK SGM+ EA R+ E
Sbjct: 498 SGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNE 548
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 108/447 (24%), Positives = 177/447 (39%), Gaps = 22/447 (4%)
Query: 115 RNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCK 174
+ D T N ++ LC G+ A ++ ++K IP+ S LI+ K + D K
Sbjct: 342 KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASK 401
Query: 175 IINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMF 234
++ M G PD++T ++I GL G++ AV++ + G SPDA YN ++ G+
Sbjct: 402 LLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLC 461
Query: 235 DKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDII 294
G F A + + L + P Y LI+ R A +V +G D++
Sbjct: 462 KTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVV 521
Query: 295 TYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIM 354
+N+++ + G+ +E ++ + + P+ TY+T+I + M
Sbjct: 522 HHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYM 581
Query: 355 NETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFV 414
+ P VTY ++NG C G A + M P++VTY TL+ L KE
Sbjct: 582 EKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESST 641
Query: 415 DEGIQLLYLLTGTN-CSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSS 473
E + L TN C P VT+N + G + S + E PD H
Sbjct: 642 LEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAE-----------PDGSNHG- 689
Query: 474 LAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSR 533
Q E M AY ++ LC V A D MV+
Sbjct: 690 ---------QSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKG 740
Query: 534 CKPDEKIYDALIKAVADSGMVKEANDL 560
PD + A++ G K+ ++
Sbjct: 741 FSPDPVSFAAILHGFCVVGNSKQWRNM 767
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 132/314 (42%), Gaps = 15/314 (4%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
V D N ++ LC GR + A L M ++ +P LI G I+ G D+
Sbjct: 446 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEAR 505
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
K+ ++ V G DV+ N +I G C+ G L A+ + M+ PD TY+TII G
Sbjct: 506 KVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGY 565
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
+ + A+ ++ + C P ++TYT LI C A E ++M + P++
Sbjct: 566 VKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNV 625
Query: 294 ITYNSLVSFTAKQ-GVYEETYLVISNLLSRGMQPNAVTYNTLIHSL-------------- 338
+TY +L+ AK+ E+ +++ PN VT+N L+
Sbjct: 626 VTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDG 685
Query: 339 SSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDI 398
S+HG + M YN L LC G++ A MV + PD
Sbjct: 686 SNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDP 745
Query: 399 VTYNTLLSGLCKEG 412
V++ +L G C G
Sbjct: 746 VSFAAILHGFCVVG 759
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 114/263 (43%), Gaps = 38/263 (14%)
Query: 327 NAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLY 386
N ++ + L+ + ++ ++DVL + + T + +L+ +SG L +A+ +Y
Sbjct: 98 NGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIY 157
Query: 387 STMVS-ESCFPDIVTYNTLLS-----------------------------------GLCK 410
+V PD++ N+LLS G+C
Sbjct: 158 DYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCN 217
Query: 411 EGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEIT 470
EG V+ G +L+ G C P +V YN I G ++G +E+A ++ E+ KG +P T
Sbjct: 218 EGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLET 277
Query: 471 HSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQ-RKVDIAIQALDLM 529
++ GFC + LL E+ ++ ++ +I + KVD A +++ +
Sbjct: 278 FGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPA-ESIGWI 336
Query: 530 VRSRCKPDEKIYDALIKAVADSG 552
+ + CKPD Y+ LI + G
Sbjct: 337 IANDCKPDVATYNILINRLCKEG 359
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 210/432 (48%)
Query: 144 MARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGY 203
M + IP T ++ + K+ + D + + M G D+ + ++I C+
Sbjct: 70 MLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSR 129
Query: 204 LKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTV 263
L A+ L+ M G P +T +++ G F EAVS G P ++ Y
Sbjct: 130 LSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNT 189
Query: 264 LIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRG 323
+I +C+ ALEV M +G D +TYN+L+S + G + + ++ +++ R
Sbjct: 190 VINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRK 249
Query: 324 MQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAI 383
+ PN + + LI + G ++ + M S P TYN ++NG C G L A
Sbjct: 250 IDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAK 309
Query: 384 SLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGL 443
++ MVS+ CFPD+VTYNTL++G CK V++G++L +T TYN I G
Sbjct: 310 YMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGY 369
Query: 444 ARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKH 503
+ G + A+++++ M+ G+ PD +T++ L C ++E+A+ +++++ K + +
Sbjct: 370 CQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDI 429
Query: 504 TAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQR 563
Y +I GLC+ K+ A + R KPD Y +I + G+ +EA+ L +R
Sbjct: 430 ITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRR 489
Query: 564 LIEWKILKTEII 575
+ E + +E I
Sbjct: 490 MKEDGFMPSERI 501
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 157/345 (45%)
Query: 124 ILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSG 183
+L C R A L++ M +P+ +I GL K ++ ++ M G
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 214
Query: 184 GVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAV 243
D +T N +I GL G A L+ DM P+ I + +I +GN EA
Sbjct: 215 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 274
Query: 244 SFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFT 303
+ +K+ +R+ P + TY LI C + A + + M +GC+PD++TYN+L++
Sbjct: 275 NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 334
Query: 304 AKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTR 363
K E+ + + +G+ +A TYNTLIH G + V M + P
Sbjct: 335 CKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDI 394
Query: 364 VTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYL 423
VTYNI+L+ LC +G +++A+ + + DI+TYN ++ GLC+ + E L
Sbjct: 395 VTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRS 454
Query: 424 LTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDE 468
LT P + Y I GL R G A +L M G +P E
Sbjct: 455 LTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSE 499
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 171/376 (45%), Gaps = 4/376 (1%)
Query: 204 LKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTV 263
A L +M S P + + ++ + F+ + + G L ++T+
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119
Query: 264 LIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRG 323
LI CR AL +L M G P I+T SL++ + ++E ++ ++ G
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179
Query: 324 MQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAI 383
PN V YNT+I+ L + + +V M + VTYN +++GL SG A
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239
Query: 384 SLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGL 443
L MV P+++ + L+ KEG + E L + + P + TYN I+G
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299
Query: 444 ARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKH 503
G + AK ++ M+ KG PD +T+++L GFC ++E+ M+L EM +
Sbjct: 300 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 359
Query: 504 TAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA----ND 559
Y +I G C+ K+++A + + MV PD Y+ L+ + ++G +++A D
Sbjct: 360 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVED 419
Query: 560 LHQRLIEWKILKTEII 575
L + ++ I+ II
Sbjct: 420 LQKSEMDVDIITYNII 435
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 124/292 (42%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
+R D T N ++ L GR AARL+ M ++ P+ T LI +K G + +
Sbjct: 215 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 274
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
+ M+ VP+V T N +I G C G L A + + M GC PD +TYNT+I G
Sbjct: 275 NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 334
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
+ + + + +G TY LI C+ A +V M G PDI
Sbjct: 335 CKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDI 394
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
+TYN L+ G E+ +++ +L M + +TYN +I L +
Sbjct: 395 VTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRS 454
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLL 405
+ P + Y M++GLC+ GL A L M + P Y+ L
Sbjct: 455 LTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETL 506
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 142/490 (28%), Positives = 235/490 (47%), Gaps = 29/490 (5%)
Query: 104 PGKPVKPPPFVRNDGFTNNK----ILQNLCTRGRLMAAAR--LIEIMAR-----KSQIPH 152
P ++ +V N GF++ + ++ R R + AR L I R K Q +
Sbjct: 81 PADGLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRY 140
Query: 153 FPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVE 212
F S LIR G + K+ M G P V+T N ++ L KRG A DL +
Sbjct: 141 FNS---LIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFD 197
Query: 213 DMSLS-GCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRY 271
+M + G +PD+ T+NT+I G +EA +KD C P ++TY +I+ +CR
Sbjct: 198 EMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRA 257
Query: 272 CGAIRALEVLEDMAMEG--CYPDIITYNSLVS-FTAKQGVYEETYLVISNLLSRGMQPNA 328
A VL M + +P++++Y +LV + KQ + +E LV ++LSRG++PNA
Sbjct: 258 GKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEI-DEAVLVFHDMLSRGLKPNA 316
Query: 329 VTYNTLIHSLSSHGYWDGVDDVLEIMNE--TSSPPTRVTYNIMLNGLCKSGLLDRAISLY 386
VTYNTLI LS +D + D+L N+ T+ P T+NI++ C +G LD A+ ++
Sbjct: 317 VTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVF 376
Query: 387 STMVSESCFPDIVTYNTLLSGLC-------KEGFVDEGIQLLYLLTGTNCSPGLVTYNIA 439
M++ PD +Y+ L+ LC E +E + LL C P YN
Sbjct: 377 QEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPM 436
Query: 440 IDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDE 499
+ L G + A++++ +++ +G V D ++ +L G C + + A ELL M +++
Sbjct: 437 FEYLCANGKTKQAEKVFRQLMKRG-VQDPPSYKTLITGHCREGKFKPAYELLVLMLRREF 495
Query: 500 KIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEAND 559
Y +I GL K + +A L M+RS P + +++ +A E+
Sbjct: 496 VPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFC 555
Query: 560 LHQRLIEWKI 569
L ++E +I
Sbjct: 556 LVTLMLEKRI 565
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 91/426 (21%), Positives = 163/426 (38%), Gaps = 81/426 (19%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQ--IPHFPSCTNLIRGLIKIGQIDKGCK 174
D T N I+ LC G++ A ++ M +K+ P+ S T L+RG +ID+
Sbjct: 243 DVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVL 302
Query: 175 IINIMVMSGGVPDVITCNMVIGGL------------------------------------ 198
+ + M+ G P+ +T N +I GL
Sbjct: 303 VFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKA 362
Query: 199 -CKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKG---- 253
C G+L +A+ + ++M PD+ +Y+ +IR + + F+ A + + + K
Sbjct: 363 HCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLG 422
Query: 254 ---CPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYE 310
C P Y + E +C +A +V + G D +Y +L++ ++G ++
Sbjct: 423 KDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGV-QDPPSYKTLITGHCREGKFK 481
Query: 311 ETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIML 370
Y ++ +L R P+ TY LI L G D L+ M +S P T++ +L
Sbjct: 482 PAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVL 541
Query: 371 NGLCKSGLLDRAISLYSTMVSESCFPDI-------------------------------- 398
L K + + L + M+ + +I
Sbjct: 542 AELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYL 601
Query: 399 VTYNTLLSGLCK-EGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYS 457
V LL LC+ +D +L+ L + + T N I+GL + A LY+
Sbjct: 602 VKMEELLGYLCENRKLLDAHTLVLFCLEKSQMV-DIDTCNTVIEGLCKHKRHSEAFSLYN 660
Query: 458 EMIGKG 463
E++ G
Sbjct: 661 ELVELG 666
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 135/320 (42%), Gaps = 19/320 (5%)
Query: 116 NDGFTN--------NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIG 167
ND FT N +++ C G L AA ++ + M P S + LIR L
Sbjct: 343 NDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRN 402
Query: 168 QIDKGCKIINIM----VMSGG---VPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCS 220
+ D+ + N + V+ G P N + LC G K A + + G
Sbjct: 403 EFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ 462
Query: 221 PDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEV 280
D +Y T+I G +G F A LR+ P L TY +LI+ + + A+ A +
Sbjct: 463 -DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDT 521
Query: 281 LEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSS 340
L+ M P T++S+++ AK+ E++ +++ +L + ++ N ++ L S
Sbjct: 522 LQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFS 581
Query: 341 HGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVT 400
+ ++ ++ + V +L LC++ L A +L + +S DI T
Sbjct: 582 SAQKEKAFLIVRLLYDNGYL---VKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDT 638
Query: 401 YNTLLSGLCKEGFVDEGIQL 420
NT++ GLCK E L
Sbjct: 639 CNTVIEGLCKHKRHSEAFSL 658
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 185 bits (469), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 117/454 (25%), Positives = 215/454 (47%), Gaps = 6/454 (1%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
V D T N IL+ + +GRL L+ M + +P+ + NL+ G K+G + +
Sbjct: 236 VNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAF 295
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
+I+ +M + +PD+ T N++I GLC G ++ ++L++ M PD +TYNT+I G
Sbjct: 296 QIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGC 355
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVC---RYCGAIRALEVLEDMAMEGCY 290
F+ G EA + G +T+ + ++ +C + R ++ L D M G
Sbjct: 356 FELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVD--MHGFS 413
Query: 291 PDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDV 350
PDI+TY++L+ K G ++ + +G++ N +T NT++ +L D ++
Sbjct: 414 PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNL 473
Query: 351 LEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCK 410
L ++ VTY ++ G + +++A+ ++ M P + T+N+L+ GLC
Sbjct: 474 LNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCH 533
Query: 411 EGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEIT 470
G + ++ L + P T+N I G + G +E A E Y+E I PD T
Sbjct: 534 HGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYT 593
Query: 471 HSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMV 530
+ L G C E+A+ + ++ E + Y +I CK +K+ A L M
Sbjct: 594 CNILLNGLCKEGMTEKALNFFNTLIEERE-VDTVTYNTMISAFCKDKKLKEAYDLLSEME 652
Query: 531 RSRCKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
+PD Y++ I + + G + E ++L ++
Sbjct: 653 EKGLEPDRFTYNSFISLLMEDGKLSETDELLKKF 686
Score = 171 bits (434), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 131/512 (25%), Positives = 223/512 (43%), Gaps = 44/512 (8%)
Query: 101 LVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLI 160
L+ P + PPP + L G+ A ++ + M R P+ +C L+
Sbjct: 118 LLHPNLHLSPPP----SKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLL 173
Query: 161 RGLIKIGQ---IDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDM-SL 216
GL++ I ++ + MV G +V T N+++ G C G L+ A+ ++E M S
Sbjct: 174 IGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSE 233
Query: 217 SGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIR 276
+PD +TYNTI++ M KG ++ D + G P +TY L+ C+
Sbjct: 234 FKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKE 293
Query: 277 ALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIH 336
A +++E M PD+ TYN L++ G E ++ + S +QP+ VTYNTLI
Sbjct: 294 AFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLID 353
Query: 337 SLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCF- 395
G ++E M +VT+NI L LCK + +V F
Sbjct: 354 GCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFS 413
Query: 396 PDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKEL 455
PDIVTY+TL+ K G + ++++ + +T N +D L + ++ A L
Sbjct: 414 PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNL 473
Query: 456 YSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKD----------------- 498
+ +G + DE+T+ +L GF +++E+A+E+ EM K
Sbjct: 474 LNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCH 533
Query: 499 --------EKIKHTA----------YRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKI 540
EK A + +ILG CK+ +V+ A + + ++ KPD
Sbjct: 534 HGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYT 593
Query: 541 YDALIKAVADSGMVKEANDLHQRLIEWKILKT 572
+ L+ + GM ++A + LIE + + T
Sbjct: 594 CNILLNGLCKEGMTEKALNFFNTLIEEREVDT 625
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 164/362 (45%), Gaps = 10/362 (2%)
Query: 114 VRNDGFTNNKILQN-----LCTRGRLMAAARLI-EIMARKSQIPHFPSCTNLIRGLIKIG 167
+ NDG N++ N LC + A R + E++ P + LI+ +K+G
Sbjct: 371 MENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVG 430
Query: 168 QIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYN 227
+ +++ M G + IT N ++ LCK L A +L+ G D +TY
Sbjct: 431 DLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYG 490
Query: 228 TIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAME 287
T+I G F + +A+ W + + P + T+ LI +C + A+E +++A
Sbjct: 491 TLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAES 550
Query: 288 GCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGV 347
G PD T+NS++ K+G E+ + + + +P+ T N L++ L G +
Sbjct: 551 GLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKA 610
Query: 348 DDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSG 407
+ + E T VTYN M++ CK L A L S M + PD TYN+ +S
Sbjct: 611 LNFFNTLIEEREVDT-VTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISL 669
Query: 408 LCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPD 467
L ++G + E +LL +G G + ++ ++ + ES +EL +E I V D
Sbjct: 670 LMEDGKLSETDELLKKFSG---KFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVID 726
Query: 468 EI 469
E+
Sbjct: 727 EL 728
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 185 bits (469), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 117/379 (30%), Positives = 178/379 (46%), Gaps = 1/379 (0%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T ++ L + A L+E M K P + +I GL K G+ D ++
Sbjct: 179 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 238
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
N M DV+ N +I GLCK ++ A DL M G PD TYN +I + +
Sbjct: 239 NKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNY 298
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAM-EGCYPDIIT 295
G +++A D L K P L+ + LI+ + + A ++ ++M + C+PD++
Sbjct: 299 GRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVA 358
Query: 296 YNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMN 355
YN+L+ K EE V + RG+ N VTY TLIH D V + M
Sbjct: 359 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 418
Query: 356 ETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVD 415
P +TYNI+L+GLC +G ++ A+ ++ M DIVTY T++ LCK G V+
Sbjct: 419 SDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVE 478
Query: 416 EGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLA 475
+G L L+ P +VTY + G R G E A L+ EM G +P+ T+++L
Sbjct: 479 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI 538
Query: 476 WGFCGVDQLEEAMELLKEM 494
+ EL+KEM
Sbjct: 539 RARLRDGDEAASAELIKEM 557
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 222/480 (46%), Gaps = 40/480 (8%)
Query: 123 KILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMS 182
K+LQ+L +L A L M + P + L+ + K+ + D + M
Sbjct: 49 KVLQDL----KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL 104
Query: 183 GGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEA 242
G ++ T ++ I C+R L A+ ++ M G P +T N+++ G +EA
Sbjct: 105 GISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 164
Query: 243 VSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSF 302
V+ + G P +T+T L+ + ++ A A+ ++E M ++GC PD++TY ++++
Sbjct: 165 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 224
Query: 303 TAKQG----------------------VY-------------EETYLVISNLLSRGMQPN 327
K+G +Y ++ + + + + ++G++P+
Sbjct: 225 LCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPD 284
Query: 328 AVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYS 387
TYN LI L ++G W +L M E + P V +N +++ K G L A LY
Sbjct: 285 VFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYD 344
Query: 388 TMV-SESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARM 446
MV S+ CFPD+V YNTL+ G CK V+EG+++ ++ VTY I G +
Sbjct: 345 EMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQA 404
Query: 447 GSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAY 506
++A+ ++ +M+ G+ PD +T++ L G C +E A+ + + M K+D K+ Y
Sbjct: 405 RDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTY 464
Query: 507 RCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
+I LCK KV+ + KP+ Y ++ G+ +EA+ L + E
Sbjct: 465 TTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKE 524
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 189/401 (47%), Gaps = 1/401 (0%)
Query: 158 NLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLS 217
NL R +++ ++D + MV S P ++ + ++ + K + L E M
Sbjct: 45 NLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL 104
Query: 218 GCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRA 277
G S + TY+ I + + A++ ++ G P ++T L+ C A
Sbjct: 105 GISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 164
Query: 278 LEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHS 337
+ +++ M G PD +T+ +LV + E ++ ++ +G QP+ VTY +I+
Sbjct: 165 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 224
Query: 338 LSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPD 397
L G D ++L M + V YN +++GLCK +D A L++ M ++ PD
Sbjct: 225 LCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPD 284
Query: 398 IVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYS 457
+ TYN L+S LC G + +LL + N +P LV +N ID + G + A++LY
Sbjct: 285 VFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYD 344
Query: 458 EMI-GKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQ 516
EM+ K PD + +++L GFC ++EE ME+ +EM ++ Y +I G +
Sbjct: 345 EMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQA 404
Query: 517 RKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
R D A MV PD Y+ L+ + ++G V+ A
Sbjct: 405 RDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETA 445
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 187/414 (45%), Gaps = 36/414 (8%)
Query: 119 FTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINI 178
+T + + C R +L A ++ M + P + +L+ G +I + +++
Sbjct: 111 YTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQ 170
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN 238
MV G PD +T ++ GL + AV LVE M + GC PD +TY +I G+ +G
Sbjct: 171 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 230
Query: 239 FNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNS 298
+ A++ + ++ Y +I+ +C+Y A ++ M +G PD+ TYN
Sbjct: 231 PDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNP 290
Query: 299 LVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVL-EIMNET 357
L+S G + + ++S++L + + P+ V +N LI + G + + E++
Sbjct: 291 LISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSK 350
Query: 358 SSPPTRVTYNIMLNGLCK----------------SGLL-------------------DRA 382
P V YN ++ G CK GL+ D A
Sbjct: 351 HCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 410
Query: 383 ISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDG 442
++ MVS+ PDI+TYN LL GLC G V+ + + + + +VTY I+
Sbjct: 411 QMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEA 470
Query: 443 LARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHK 496
L + G +E +L+ + KG+ P+ +T++++ GFC EEA L EM +
Sbjct: 471 LCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKE 524
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 157/347 (45%), Gaps = 18/347 (5%)
Query: 74 SAVIDRVNEVDHEDWGLESFERRESGELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGR 133
+ +ID + + H D + F + E+ K +KP D FT N ++ LC GR
Sbjct: 254 NTIIDGLCKYKHMDDAFDLFNKMET-------KGIKP------DVFTYNPLISCLCNYGR 300
Query: 134 LMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGG-VPDVITCN 192
A+RL+ M K+ P LI +K G++ + K+ + MV S PDV+ N
Sbjct: 301 WSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYN 360
Query: 193 MVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRK 252
+I G CK ++ +++ +MS G + +TY T+I G F + + A +K +
Sbjct: 361 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD 420
Query: 253 GCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEET 312
G P ++TY +L++ +C AL V E M DI+TY +++ K G E+
Sbjct: 421 GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG 480
Query: 313 YLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNG 372
+ + +L +G++PN VTY T++ G + D + M E P TYN ++
Sbjct: 481 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Query: 373 LCKSGLLDRAISLYSTMVSESCFPDIVTY----NTLLSGLCKEGFVD 415
+ G + L M S D T+ N L G + F+D
Sbjct: 541 RLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDGRLDKSFLD 587
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 165/351 (47%), Gaps = 2/351 (0%)
Query: 215 SLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGA 274
S +G S D N + R + ++A+ + D ++ P ++ ++ L+ + +
Sbjct: 33 SFAGASSDDCREN-LSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKF 91
Query: 275 IRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTL 334
+ + E M G ++ TY+ +++ ++ ++ ++ G P+ VT N+L
Sbjct: 92 DLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSL 151
Query: 335 IHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESC 394
++ +++ M E P VT+ +++GL + A++L MV + C
Sbjct: 152 LNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC 211
Query: 395 FPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKE 454
PD+VTY +++GLCK G D + LL + +V YN IDGL + M+ A +
Sbjct: 212 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFD 271
Query: 455 LYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLC 514
L+++M KGI PD T++ L C + +A LL +M +K+ + +I
Sbjct: 272 LFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFV 331
Query: 515 KQRKVDIAIQALDLMVRSR-CKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
K+ K+ A + D MV+S+ C PD Y+ LIK V+E ++ + +
Sbjct: 332 KEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREM 382
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 132/292 (45%)
Query: 277 ALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIH 336
A+ + DM +P I+ ++ L+S AK ++ + + + G+ N TY+ I+
Sbjct: 59 AIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFIN 118
Query: 337 SLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFP 396
+L M + P+ VT N +LNG C + A++L MV P
Sbjct: 119 YFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 178
Query: 397 DIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELY 456
D VT+ TL+ GL + E + L+ + C P LVTY I+GL + G + A L
Sbjct: 179 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 238
Query: 457 SEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQ 516
++M I D + ++++ G C +++A +L +M K K Y +I LC
Sbjct: 239 NKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNY 298
Query: 517 RKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWK 568
+ A + L M+ PD ++ALI A G + EA L+ +++ K
Sbjct: 299 GRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSK 350
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 112/244 (45%)
Query: 326 PNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISL 385
P+ V ++ L+ +++ +D V + E M TY+I +N C+ L A+++
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 386 YSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLAR 445
M+ P IVT N+LL+G C + E + L+ + P VT+ + GL +
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 446 MGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTA 505
A L M+ KG PD +T+ ++ G C + + A+ LL +M K +
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252
Query: 506 YRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLI 565
Y +I GLCK + +D A + M KPD Y+ LI + + G +A+ L ++
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 566 EWKI 569
E I
Sbjct: 313 EKNI 316
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 91/191 (47%)
Query: 379 LDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNI 438
LD AI L+ MV FP IV ++ LLS + K D I L + S L TY+I
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 439 AIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKD 498
I+ R + A + +M+ G P +T +SL GFC +++ EA+ L+ +M +
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 499 EKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEAN 558
+ + ++ GL + K A+ ++ MV C+PD Y A+I + G A
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 559 DLHQRLIEWKI 569
+L ++ + KI
Sbjct: 236 NLLNKMEKGKI 246
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 131/472 (27%), Positives = 218/472 (46%), Gaps = 19/472 (4%)
Query: 101 LVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLI 160
L+ G PV P R G T T+ M I++ + Q PS +
Sbjct: 21 LLQKGNPVIVPFISRFWGRT-------FSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFS 73
Query: 161 RGLIKIGQ---IDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLS 217
+ L KI + D + + M + G D+ + N+VI LC+ A+ +V M
Sbjct: 74 KVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKF 133
Query: 218 GCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRA 277
G PD +T +++I G +A+ G P ++ Y +I+ C+ A
Sbjct: 134 GYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDA 193
Query: 278 LEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHS 337
+E+ + M +G D +TYNSLV+ G + + ++ +++ R + PN +T+ +I
Sbjct: 194 VELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDV 253
Query: 338 LSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPD 397
G + + E M P TYN ++NGLC G +D A + MV++ C PD
Sbjct: 254 FVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPD 313
Query: 398 IVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYS 457
+VTYNTL++G CK VDEG +L + +TYN I G + G ++A+E++S
Sbjct: 314 VVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS 373
Query: 458 EMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQR 517
M + P+ T+S L +G C ++E+A+ L + M K + ++ T Y VI G+CK
Sbjct: 374 RMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIG 430
Query: 518 KVDIAIQALDLMVRSRC---KPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
V+ A DL C KPD Y +I +++ L++++ E
Sbjct: 431 NVE---DAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQE 479
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 198/408 (48%), Gaps = 8/408 (1%)
Query: 168 QIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYN 227
+ID CK M+ S +P ++ + V+ + K + L M + G D +YN
Sbjct: 53 EIDLFCK----MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108
Query: 228 TIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAME 287
+I + F A+S ++ G P ++T + LI C+ A++++ M
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168
Query: 288 GCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGV 347
G PD++ YN+++ + K G+ + + + G++ +AVTYN+L+ L G W
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 348 DDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSG 407
++ M P +T+ +++ K G A+ LY M PD+ TYN+L++G
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288
Query: 408 LCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPD 467
LC G VDE Q+L L+ C P +VTYN I+G + ++ +L+ EM +G+V D
Sbjct: 289 LCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348
Query: 468 EITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALD 527
IT++++ G+ + + A E+ M D + Y ++ GLC +V+ A+ +
Sbjct: 349 TITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFE 405
Query: 528 LMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKILKTEII 575
M +S + D Y+ +I + G V++A DL R + K LK +++
Sbjct: 406 NMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLF-RSLSCKGLKPDVV 452
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 167/350 (47%), Gaps = 3/350 (0%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T + ++ C R+ A L+ M P +I G KIG ++ ++
Sbjct: 138 DVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELF 197
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
+ M G D +T N ++ GLC G A L+ DM + P+ IT+ +I +
Sbjct: 198 DRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKE 257
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
G F+EA+ +++ R+ P + TY LI +C + A ++L+ M +GC PD++TY
Sbjct: 258 GKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTY 317
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
N+L++ K +E + + RG+ + +TYNT+I G D EI +
Sbjct: 318 NTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ---EIFSR 374
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDE 416
S P TY+I+L GLC + +++A+ L+ M DI TYN ++ G+CK G V++
Sbjct: 375 MDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVED 434
Query: 417 GIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVP 466
L L+ P +V+Y I G R + + LY +M G++P
Sbjct: 435 AWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 208/443 (46%), Gaps = 1/443 (0%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N IL L G++ A ++ E M +K P+ + LI L + G++D ++ + M
Sbjct: 347 NCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQK 405
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
+G P+V T N+++ LCK L A + E+M C+PD IT+ ++I G+ G ++
Sbjct: 406 AGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDD 465
Query: 242 AVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVS 301
A ++ L C I YT LI+ + ++ +DM + C PD+ N+ +
Sbjct: 466 AYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMD 525
Query: 302 FTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPP 361
K G E+ + + +R P+A +Y+ LIH L G+ + ++ M E
Sbjct: 526 CMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVL 585
Query: 362 TRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLL 421
YNI+++G CK G +++A L M ++ P +VTY +++ GL K +DE L
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF 645
Query: 422 YLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGV 481
+V Y+ IDG ++G ++ A + E++ KG+ P+ T +SL
Sbjct: 646 EEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKA 705
Query: 482 DQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIY 541
+++ EA+ + M + Y +I GLCK RK + A M + KP Y
Sbjct: 706 EEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISY 765
Query: 542 DALIKAVADSGMVKEANDLHQRL 564
+I +A +G + EA L R
Sbjct: 766 TTMISGLAKAGNIAEAGALFDRF 788
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/462 (25%), Positives = 218/462 (47%), Gaps = 3/462 (0%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
++ D T ++ LC RL A + E + + ++P + +I G G+ D+
Sbjct: 269 LKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAY 328
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
++ G +P VI N ++ L K G + A+ + E+M +P+ TYN +I +
Sbjct: 329 SLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDML 387
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
G + A + G P + T ++++ +C+ A + E+M + C PD
Sbjct: 388 CRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDE 447
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGY-WDGVDDVLE 352
IT+ SL+ K G ++ Y V +L + N++ Y +LI + +HG DG +
Sbjct: 448 ITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKD 507
Query: 353 IMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEG 412
++N+ SP ++ N ++ + K+G ++ +++ + + PD +Y+ L+ GL K G
Sbjct: 508 MINQNCSPDLQLL-NTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAG 566
Query: 413 FVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHS 472
F +E +L Y + C YNI IDG + G + A +L EM KG P +T+
Sbjct: 567 FANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYG 626
Query: 473 SLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRS 532
S+ G +D+L+EA L +E K ++ Y +I G K ++D A L+ +++
Sbjct: 627 SVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK 686
Query: 533 RCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKILKTEI 574
P+ +++L+ A+ + + EA Q + E K ++
Sbjct: 687 GLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQV 728
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 196/443 (44%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T N ++ LC G+L A L + M + P+ + ++ L K ++D+ C + M
Sbjct: 379 TYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEM 438
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
PD IT +I GL K G + A + E M S C ++I Y ++I+ F+ G
Sbjct: 439 DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRK 498
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
+ +KD + + C P L ++ + + + + E++ PD +Y+ L
Sbjct: 499 EDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSIL 558
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS 359
+ K G ETY + ++ +G + YN +I G + +LE M
Sbjct: 559 IHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGF 618
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQ 419
PT VTY +++GL K LD A L+ S+ ++V Y++L+ G K G +DE
Sbjct: 619 EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYL 678
Query: 420 LLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFC 479
+L L +P L T+N +D L + + A + M P+++T+ L G C
Sbjct: 679 ILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLC 738
Query: 480 GVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEK 539
V + +A +EM K+ K +Y +I GL K + A D + PD
Sbjct: 739 KVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSA 798
Query: 540 IYDALIKAVADSGMVKEANDLHQ 562
Y+A+I+ +++ +A L +
Sbjct: 799 CYNAMIEGLSNGNRAMDAFSLFE 821
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 205/438 (46%), Gaps = 7/438 (1%)
Query: 133 RLMAAARLIEIM---ARKSQIPHFPSCTN-LIRGLIKIGQIDKGCKIINIMVMSGGVPDV 188
RL R IE R++++PH P N L+ + + D +I+ M ++G P V
Sbjct: 74 RLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSV 133
Query: 189 ITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKD 248
TC ++ G K L+ D+V+ M P Y T+I G F N ++ +
Sbjct: 134 NTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLI-GAFSAVNHSDMMLTLFQ 192
Query: 249 QLRK-GCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQG 307
Q+++ G P + +T LI + AL +L++M DI+ YN + K G
Sbjct: 193 QMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVG 252
Query: 308 VYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYN 367
+ + + + G++P+ VTY ++I L D ++ E + + P YN
Sbjct: 253 KVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYN 312
Query: 368 IMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGT 427
M+ G +G D A SL ++ P ++ YN +L+ L K G VDE +++ +
Sbjct: 313 TMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-K 371
Query: 428 NCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEA 487
+ +P L TYNI ID L R G +++A EL M G+ P+ T + + C +L+EA
Sbjct: 372 DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEA 431
Query: 488 MELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKA 547
+ +EM K + +I GL K +VD A + + M+ S C+ + +Y +LIK
Sbjct: 432 CAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKN 491
Query: 548 VADSGMVKEANDLHQRLI 565
+ G ++ + +++ +I
Sbjct: 492 FFNHGRKEDGHKIYKDMI 509
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 182/396 (45%), Gaps = 4/396 (1%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T ++ L GR+ A ++ E M + T+LI+ G+ + G KI
Sbjct: 446 DEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIY 505
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
M+ PD+ N + + K G + + E++ PDA +Y+ +I G+
Sbjct: 506 KDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKA 565
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAI-RALEVLEDMAMEGCYPDIIT 295
G NE + +GC Y ++I+ C+ CG + +A ++LE+M +G P ++T
Sbjct: 566 GFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK-CGKVNKAYQLLEEMKTKGFEPTVVT 624
Query: 296 YNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMN 355
Y S++ AK +E Y++ S+ ++ N V Y++LI G D +LE +
Sbjct: 625 YGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELM 684
Query: 356 ETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVD 415
+ P T+N +L+ L K+ ++ A+ + +M C P+ VTY L++GLCK +
Sbjct: 685 QKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFN 744
Query: 416 EGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLA 475
+ + P ++Y I GLA+ G++ A L+ G VPD ++++
Sbjct: 745 KAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMI 804
Query: 476 WGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVIL 511
G ++ +A L +E ++ I + CV+L
Sbjct: 805 EGLSNGNRAMDAFSLFEETRRRGLPIHNKT--CVVL 838
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 156/350 (44%)
Query: 115 RNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCK 174
R + +++N GR ++ + M ++ P + + K G+ +KG
Sbjct: 479 RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRA 538
Query: 175 IINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMF 234
+ + VPD + +++I GL K G+ +L M GC D YN +I G
Sbjct: 539 MFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFC 598
Query: 235 DKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDII 294
G N+A ++ KG P ++TY +I+ + + A + E+ + +++
Sbjct: 599 KCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVV 658
Query: 295 TYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIM 354
Y+SL+ K G +E YL++ L+ +G+ PN T+N+L+ +L + + M
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSM 718
Query: 355 NETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFV 414
E P +VTY I++NGLCK ++A + M + P ++Y T++SGL K G +
Sbjct: 719 KELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNI 778
Query: 415 DEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGI 464
E L P YN I+GL+ A L+ E +G+
Sbjct: 779 AEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 119/261 (45%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N ++ C G++ A +L+E M K P + ++I GL KI ++D+ +
Sbjct: 591 NIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 650
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
+V+ + +I G K G + A ++E++ G +P+ T+N+++ + NE
Sbjct: 651 KRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINE 710
Query: 242 AVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVS 301
A+ ++ C P +TY +LI +C+ +A ++M +G P I+Y +++S
Sbjct: 711 ALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMIS 770
Query: 302 FTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPP 361
AK G E + + G P++ YN +I LS+ + E P
Sbjct: 771 GLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPI 830
Query: 362 TRVTYNIMLNGLCKSGLLDRA 382
T ++L+ L K+ L++A
Sbjct: 831 HNKTCVVLLDTLHKNDCLEQA 851
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 104/238 (43%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T ++ L RL A L E K + ++LI G K+G+ID+ I+ +
Sbjct: 624 TYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEEL 683
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
+ G P++ T N ++ L K + A+ + M C+P+ +TY +I G+ F
Sbjct: 684 MQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKF 743
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
N+A FW++ ++G P I+YT +I + + A + + G PD YN++
Sbjct: 744 NKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAM 803
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNET 357
+ + + + + RG+ + T L+ +L + + V ++ ET
Sbjct: 804 IEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRET 861
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 65/148 (43%)
Query: 119 FTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINI 178
+T N +L L + A + M P+ + LI GL K+ + +K
Sbjct: 693 YTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQE 752
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN 238
M G P I+ +I GL K G + A L + +G PD+ YN +I G+ +
Sbjct: 753 MQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNR 812
Query: 239 FNEAVSFWKDQLRKGCPPYLITYTVLIE 266
+A S +++ R+G P + T VL++
Sbjct: 813 AMDAFSLFEETRRRGLPIHNKTCVVLLD 840
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 218/433 (50%), Gaps = 2/433 (0%)
Query: 135 MAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMV 194
MA + L E+ +K +P + T++I +K G +D ++ + M+ G +V+ +
Sbjct: 286 MANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSL 345
Query: 195 IGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGC 254
I G CK L SA+ L + M G SP+++T++ +I G +A+ F+K G
Sbjct: 346 ITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGL 405
Query: 255 PPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYL 314
P + +I+ + AL++ D + E ++ N+++S+ KQG +E
Sbjct: 406 TPSVFHVHTIIQGWLKGQKHEEALKLF-DESFETGLANVFVCNTILSWLCKQGKTDEATE 464
Query: 315 VISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLC 374
++S + SRG+ PN V+YN ++ D V + E P TY+I+++G
Sbjct: 465 LLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCF 524
Query: 375 KSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLY-LLTGTNCSPGL 433
++ A+ + + M S + + V Y T+++GLCK G + +LL ++
Sbjct: 525 RNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSC 584
Query: 434 VTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKE 493
++YN IDG + G M+SA Y EM G GI P+ IT++SL G C +++++A+E+ E
Sbjct: 585 MSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDE 644
Query: 494 MHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGM 553
M K K+ AY +I G CK+ ++ A ++ P + IY++LI + G
Sbjct: 645 MKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGN 704
Query: 554 VKEANDLHQRLIE 566
+ A DL++++++
Sbjct: 705 MVAALDLYKKMLK 717
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 199/440 (45%), Gaps = 2/440 (0%)
Query: 132 GRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITC 191
G + A + M P +I+G +K + ++ K+ + G+ +V C
Sbjct: 388 GEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFD-ESFETGLANVFVC 446
Query: 192 NMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLR 251
N ++ LCK+G A +L+ M G P+ ++YN ++ G + N + A + + L
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE 506
Query: 252 KGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEE 311
KG P TY++LI+ R ALEV+ M + + Y ++++ K G +
Sbjct: 507 KGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSK 566
Query: 312 TYLVISNLLS-RGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIML 370
+++N++ + + + ++YN++I G D E M P +TY ++
Sbjct: 567 ARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLM 626
Query: 371 NGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCS 430
NGLCK+ +D+A+ + M ++ DI Y L+ G CK ++ L L +
Sbjct: 627 NGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLN 686
Query: 431 PGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMEL 490
P YN I G +G+M +A +LY +M+ G+ D T+++L G L A EL
Sbjct: 687 PSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASEL 746
Query: 491 LKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVAD 550
EM Y ++ GL K+ + ++ + M ++ P+ IY+A+I
Sbjct: 747 YTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYR 806
Query: 551 SGMVKEANDLHQRLIEWKIL 570
G + EA LH +++ IL
Sbjct: 807 EGNLDEAFRLHDEMLDKGIL 826
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 179/398 (44%), Gaps = 36/398 (9%)
Query: 119 FTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQID-------- 170
F N IL LC +G+ A L+ M + P+ S N++ G + +D
Sbjct: 444 FVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSN 503
Query: 171 ---KGCK------------------------IINIMVMSGGVPDVITCNMVIGGLCKRGY 203
KG K ++N M S + + +I GLCK G
Sbjct: 504 ILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQ 563
Query: 204 LKSAVDLVEDM-SLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYT 262
A +L+ +M ++YN+II G F +G + AV+ +++ G P +ITYT
Sbjct: 564 TSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYT 623
Query: 263 VLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSR 322
L+ +C+ +ALE+ ++M +G DI Y +L+ K+ E + S LL
Sbjct: 624 SLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEE 683
Query: 323 GMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRA 382
G+ P+ YN+LI + G D+ + M + TY +++GL K G L A
Sbjct: 684 GLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILA 743
Query: 383 ISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDG 442
LY+ M + PD + Y +++GL K+G + +++ + N +P ++ YN I G
Sbjct: 744 SELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAG 803
Query: 443 LARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCG 480
R G+++ A L+ EM+ KGI+PD T L G G
Sbjct: 804 HYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVG 841
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 139/298 (46%), Gaps = 7/298 (2%)
Query: 159 LIRGLIKIGQIDKGCKIINIMVMSGGVPDVITC---NMVIGGLCKRGYLKSAVDLVEDMS 215
+I GL K+GQ K +++ M+ + ++C N +I G K G + SAV E+M
Sbjct: 554 IINGLCKVGQTSKARELLANMIEEKRL--CVSCMSYNSIIDGFFKEGEMDSAVAAYEEMC 611
Query: 216 LSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAI 275
+G SP+ ITY +++ G+ ++A+ + KG + Y LI+ C+
Sbjct: 612 GNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNME 671
Query: 276 RALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLI 335
A + ++ EG P YNSL+S G + +L G++ + TY TLI
Sbjct: 672 SASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLI 731
Query: 336 HSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCF 395
L G ++ M P + Y +++NGL K G + + ++ M +
Sbjct: 732 DGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVT 791
Query: 396 PDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAK 453
P+++ YN +++G +EG +DE +L + P T++I + G ++G+++ +
Sbjct: 792 PNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG--QVGNLQPVR 847
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 150/363 (41%), Gaps = 18/363 (4%)
Query: 192 NMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLR 251
N ++ K AVD+V M P N + + + + EA + +
Sbjct: 167 NYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVA 226
Query: 252 KGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEE 311
G +T +L+ R ALEVL G PD + Y+ A Q +
Sbjct: 227 IGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYS-----LAVQACCKT 281
Query: 312 TYLVISNLLSRGMQ------PNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTR-- 363
L ++N L R M+ P+ TY ++I + G +DD + + +E S
Sbjct: 282 LDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQG---NMDDAIRLKDEMLSDGISMN 338
Query: 364 -VTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLY 422
V ++ G CK+ L A+ L+ M E P+ VT++ L+ K G +++ ++
Sbjct: 339 VVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYK 398
Query: 423 LLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVD 482
+ +P + + I G + E A +L+ E G+ + ++ L+W C
Sbjct: 399 KMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSW-LCKQG 457
Query: 483 QLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYD 542
+ +EA ELL +M + +Y V+LG C+Q+ +D+A ++ KP+ Y
Sbjct: 458 KTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYS 517
Query: 543 ALI 545
LI
Sbjct: 518 ILI 520
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 54/119 (45%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
+R D T ++ L G L+ A+ L M +P T ++ GL K GQ K
Sbjct: 720 LRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVV 779
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRG 232
K+ M + P+V+ N VI G + G L A L ++M G PD T++ ++ G
Sbjct: 780 KMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 204/449 (45%), Gaps = 4/449 (0%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T IL LC G + A M P+ + T+LI GL K G I + +++
Sbjct: 251 DNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEML 310
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGC-SPDAITYNTIIRGMFD 235
MV +G P+V T +I GLCKRG+ + A L + S P+ TY ++I G
Sbjct: 311 EEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCK 370
Query: 236 KGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIIT 295
+ N A + +G P + TYT LI C+ RA E++ M EG P+I T
Sbjct: 371 EDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYT 430
Query: 296 YNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMN 355
YN+ + K+ E Y +++ S G++ + VTY LI + MN
Sbjct: 431 YNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMN 490
Query: 356 ETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVD 415
+T NI++ C+ + + L+ +VS P TY +++S CKEG +D
Sbjct: 491 KTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDID 550
Query: 416 EGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLA 475
++ + + C P TY I GL + ++ A +LY MI +G+ P E+T +LA
Sbjct: 551 LALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLA 610
Query: 476 WGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCK 535
+ +C + AM LL+ + D+K+ R ++ LC ++KV +A ++
Sbjct: 611 YEYCKRNDSANAMILLEPL---DKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSS 667
Query: 536 PDEKIYDALIKAVADSGMVKEANDLHQRL 564
D A A ++SG DL +R+
Sbjct: 668 ADRVTLAAFTTACSESGKNNLVTDLTERI 696
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 205/444 (46%), Gaps = 36/444 (8%)
Query: 159 LIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSG 218
++R +IG++++ ++ M G P IT N V+ + G ++ A ++ ++MS+ G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 219 CSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRAL 278
PD+ +Y ++ G F G EA + +++G P T T+++ +C RA+
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 279 EVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSL 338
M G P++I + SL+ K+G ++ + ++ ++ G +PN T+ LI L
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332
Query: 339 SSHGYWDGVDDV-LEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPD 397
G+ + + L+++ + P TY M+ G CK L+RA L+S M + FP+
Sbjct: 333 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 392
Query: 398 IVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYS 457
+ TY TL++G CK G +L+ L+ P + TYN AID L + A EL +
Sbjct: 393 VNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLN 452
Query: 458 EMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHK------------------KDE 499
+ G+ D +T++ L C + + +A+ M+K + +
Sbjct: 453 KAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQK 512
Query: 500 KIKHT-----------------AYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYD 542
K+K + Y +I CK+ +D+A++ M R C PD Y
Sbjct: 513 KMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYG 572
Query: 543 ALIKAVADSGMVKEANDLHQRLIE 566
+LI + MV EA L++ +I+
Sbjct: 573 SLISGLCKKSMVDEACKLYEAMID 596
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 191/420 (45%), Gaps = 1/420 (0%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T N +L+ G + A + + M+ + +P S ++ G + G+I + + + M
Sbjct: 184 TMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGM 243
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
+ G +PD TC +++ LC+ G + A+ M G P+ I + ++I G+ KG+
Sbjct: 244 IQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSI 303
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCY-PDIITYNS 298
+A ++ +R G P + T+T LI+ +C+ +A + + Y P++ TY S
Sbjct: 304 KQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTS 363
Query: 299 LVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETS 358
++ K+ ++ S + +G+ PN TY TLI+ G + +++ +M +
Sbjct: 364 MIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEG 423
Query: 359 SPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGI 418
P TYN ++ LCK A L + S D VTY L+ CK+ +++ +
Sbjct: 424 FMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQAL 483
Query: 419 QLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGF 478
+ T + NI I R M+ ++ L+ ++ G++P + T++S+ +
Sbjct: 484 AFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCY 543
Query: 479 CGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDE 538
C ++ A++ M + Y +I GLCK+ VD A + + M+ P E
Sbjct: 544 CKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPE 603
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 114/261 (43%), Gaps = 3/261 (1%)
Query: 309 YEETYLVISN-LLSRG-MQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTY 366
+ YLV ++ LL+ G +Q ++ + S G + ++ M P+ +T
Sbjct: 126 FMRLYLVTADSLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITM 185
Query: 367 NIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTG 426
N +L + GL++ A +++ M PD +Y ++ G ++G + E + L +
Sbjct: 186 NCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQ 245
Query: 427 TNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEE 486
P T + + L G + A + +MI G P+ I +SL G C +++
Sbjct: 246 RGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQ 305
Query: 487 AMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRC-KPDEKIYDALI 545
A E+L+EM + K + +I GLCK+ + A + +VRS KP+ Y ++I
Sbjct: 306 AFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMI 365
Query: 546 KAVADSGMVKEANDLHQRLIE 566
+ A L R+ E
Sbjct: 366 GGYCKEDKLNRAEMLFSRMKE 386
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 210/441 (47%), Gaps = 3/441 (0%)
Query: 123 KILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMS 182
+IL+N + A L M +P T L+ + K+ + D + + + +
Sbjct: 42 EILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIM 101
Query: 183 GGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEA 242
G D+ TCN+++ C+ A + M G PD +T+ ++I G EA
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 243 VSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSF 302
+S + G P ++ YT +I+ +C+ AL + + M G PD++ Y SLV+
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
Query: 303 TAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPT 362
G + + ++ + R ++P+ +T+N LI + G + +++ M S P
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281
Query: 363 RVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLY 422
TY ++NG C G +D A ++ M ++ CFPD+V Y +L++G CK VD+ +++ Y
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFY 341
Query: 423 LLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVD 482
++ + +TY I G ++G A+E++S M+ +G+ P+ T++ L C
Sbjct: 342 EMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNG 401
Query: 483 QLEEAMELLKEMHKKDE---KIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEK 539
++++A+ + ++M K++ Y ++ GLC K++ A+ + M +
Sbjct: 402 KVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGII 461
Query: 540 IYDALIKAVADSGMVKEANDL 560
Y +I+ + +G VK A +L
Sbjct: 462 TYTIIIQGMCKAGKVKNAVNL 482
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 198/429 (46%), Gaps = 6/429 (1%)
Query: 132 GRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITC 191
G+ ++ +RL+++ + F + ++R + Q ++ + MV S +P +I
Sbjct: 19 GKALSFSRLLDL---SFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDF 75
Query: 192 NMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLR 251
++ + K ++L + + + G S D T N ++ A SF ++
Sbjct: 76 TKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMK 135
Query: 252 KGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEE 311
G P ++T+T LI C A+ ++ M G PD++ Y +++ K G
Sbjct: 136 LGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNY 195
Query: 312 TYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLN 371
+ + + G++P+ V Y +L++ L + G W D +L M + P +T+N +++
Sbjct: 196 ALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALID 255
Query: 372 GLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSP 431
K G A LY+ M+ S P+I TY +L++G C EG VDE Q+ YL+ C P
Sbjct: 256 AFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFP 315
Query: 432 GLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELL 491
+V Y I+G + ++ A +++ EM KG+ + IT+++L GF V + A E+
Sbjct: 316 DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVF 375
Query: 492 KEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSR---CKPDEKIYDALIKAV 548
M + Y ++ LC KV A+ + M + P+ Y+ L+ +
Sbjct: 376 SHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGL 435
Query: 549 ADSGMVKEA 557
+G +++A
Sbjct: 436 CYNGKLEKA 444
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 177/381 (46%), Gaps = 3/381 (0%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T ++ C R+ A ++ M P T +I L K G ++ +
Sbjct: 141 DIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLF 200
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
+ M G PDV+ ++ GLC G + A L+ M+ PD IT+N +I +
Sbjct: 201 DQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKE 260
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
G F +A + + +R P + TYT LI C A ++ M +GC+PD++ Y
Sbjct: 261 GKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAY 320
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
SL++ K ++ + + +G+ N +TY TLI G + +V M
Sbjct: 321 TSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVS 380
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVS---ESCFPDIVTYNTLLSGLCKEGF 413
PP TYN++L+ LC +G + +A+ ++ M + P+I TYN LL GLC G
Sbjct: 381 RGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGK 440
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSS 473
+++ + + + G++TY I I G+ + G +++A L+ + KG+ P+ +T+++
Sbjct: 441 LEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTT 500
Query: 474 LAWGFCGVDQLEEAMELLKEM 494
+ G EA L ++M
Sbjct: 501 MISGLFREGLKHEAHVLFRKM 521
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 192/409 (46%), Gaps = 9/409 (2%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
V +D +T N ++ C + A+ + M + P + T+LI G ++++
Sbjct: 103 VSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAM 162
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
++N MV G PDV+ +I LCK G++ A+ L + M G PD + Y +++ G+
Sbjct: 163 SMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGL 222
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
+ G + +A S + ++ P +IT+ LI+ + + A E+ +M P+I
Sbjct: 223 CNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNI 282
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
TY SL++ +G +E + + ++G P+ V Y +LI+ VDD ++I
Sbjct: 283 FTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCK---CKKVDDAMKI 339
Query: 354 MNETSSP---PTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCK 410
E S +TY ++ G + G + A ++S MVS P+I TYN LL LC
Sbjct: 340 FYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCY 399
Query: 411 EGFVDEGIQLLYLLTGTN---CSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPD 467
G V + + + + +P + TYN+ + GL G +E A ++ +M + +
Sbjct: 400 NGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIG 459
Query: 468 EITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQ 516
IT++ + G C +++ A+ L + K K Y +I GL ++
Sbjct: 460 IITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFRE 508
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 163/354 (46%), Gaps = 3/354 (0%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
++ D I+ +LC G + A L + M P T+L+ GL G+
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
++ M PDVIT N +I K G A +L +M +P+ TY ++I G
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
+G +EA + KGC P ++ YT LI C+ A+++ +M+ +G +
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
ITY +L+ + G V S+++SRG+ PN TYN L+H L +G + E
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFED 412
Query: 354 MNETSS---PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCK 410
M + P TYN++L+GLC +G L++A+ ++ M I+TY ++ G+CK
Sbjct: 413 MQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCK 472
Query: 411 EGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGI 464
G V + L L P +VTY I GL R G A L+ +M G+
Sbjct: 473 AGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 160/347 (46%), Gaps = 16/347 (4%)
Query: 74 SAVIDRVNEVDHEDWGLESFERRESGELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGR 133
+ +ID + + H ++ L F++ E+ +R D ++ LC GR
Sbjct: 181 TTIIDSLCKNGHVNYALSLFDQMENYG-------------IRPDVVMYTSLVNGLCNSGR 227
Query: 134 LMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNM 193
A L+ M ++ P + LI +K G+ ++ N M+ P++ T
Sbjct: 228 WRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTS 287
Query: 194 VIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKG 253
+I G C G + A + M GC PD + Y ++I G ++A+ + + +KG
Sbjct: 288 LINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG 347
Query: 254 CPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETY 313
ITYT LI+ + A EV M G P+I TYN L+ G ++
Sbjct: 348 LTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKAL 407
Query: 314 LVISNLLSR---GMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIML 370
++ ++ R G+ PN TYN L+H L +G + V E M + +TY I++
Sbjct: 408 MIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIII 467
Query: 371 NGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEG 417
G+CK+G + A++L+ ++ S+ P++VTY T++SGL +EG E
Sbjct: 468 QGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEA 514
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 191/392 (48%), Gaps = 4/392 (1%)
Query: 119 FTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINI 178
T+N +L LC G + A L+ M P+ S LI+GL + +DK + N
Sbjct: 157 ITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNT 216
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYL----KSAVDLVEDMSLSGCSPDAITYNTIIRGMF 234
M G P+ +TCN+++ LC++G + K ++ + D S + D + ++ F
Sbjct: 217 MNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCF 276
Query: 235 DKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDII 294
GN +A+ WK+ +K P + Y V+I +C + A + DM G PD+
Sbjct: 277 KNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVF 336
Query: 295 TYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIM 354
TYN+L+S K+G ++E + + + G+ P+ ++Y +I L HG + ++ L M
Sbjct: 337 TYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSM 396
Query: 355 NETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFV 414
++S P + +N++++G + G A+S+ + M+S P++ T N L+ G K G +
Sbjct: 397 LKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRL 456
Query: 415 DEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSL 474
+ + + T P TYN+ + +G + A +LY EM+ +G PD IT++ L
Sbjct: 457 IDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTEL 516
Query: 475 AWGFCGVDQLEEAMELLKEMHKKDEKIKHTAY 506
G C +L++A LL + I H +
Sbjct: 517 VRGLCWKGRLKKAESLLSRIQATGITIDHVPF 548
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 201/413 (48%), Gaps = 6/413 (1%)
Query: 157 TNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSL 216
++++R L G++D + M+ SG +P +IT N ++ GLCK GY++ A LV +M
Sbjct: 125 SSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMRE 184
Query: 217 SGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAI- 275
G SP+ ++YNT+I+G+ N ++A+ + + G P +T +++ +C+ G I
Sbjct: 185 MGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQK-GVIG 243
Query: 276 ----RALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTY 331
+ LE + D + DI+ L+ K G + V + + + ++V Y
Sbjct: 244 NNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVY 303
Query: 332 NTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVS 391
N +I L S G + M + P TYN +++ LCK G D A L+ TM +
Sbjct: 304 NVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQN 363
Query: 392 ESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMES 451
PD ++Y ++ GLC G V+ + L + ++ P ++ +N+ IDG R G S
Sbjct: 364 GGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSS 423
Query: 452 AKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVIL 511
A + + M+ G+ P+ T+++L G+ +L +A + EM T Y ++
Sbjct: 424 ALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLG 483
Query: 512 GLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
C + +A Q D M+R C+PD Y L++ + G +K+A L R+
Sbjct: 484 AACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRI 536
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 195/406 (48%), Gaps = 4/406 (0%)
Query: 121 NNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMV 180
++ I+++LC +G+L AA L + M IP + +L+ GL K G I+K ++ M
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 181 MSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKG--- 237
G P+ ++ N +I GLC + A+ L M+ G P+ +T N I+ + KG
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIG 243
Query: 238 -NFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
N + + D + P ++ T+L++ + ++ALEV ++M+ + D + Y
Sbjct: 244 NNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVY 303
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
N ++ G Y + +++ RG+ P+ TYNTLI +L G +D D+ M
Sbjct: 304 NVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQN 363
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDE 416
P +++Y +++ GLC G ++RA +M+ S P+++ +N ++ G + G
Sbjct: 364 GGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSS 423
Query: 417 GIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAW 476
+ +L L+ P + T N I G + G + A + +EM I PD T++ L
Sbjct: 424 ALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLG 483
Query: 477 GFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIA 522
C + L A +L EM ++ + Y ++ GLC + ++ A
Sbjct: 484 AACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKA 529
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 156/352 (44%), Gaps = 4/352 (1%)
Query: 114 VRNDGFTNNKILQNLCTRGRL-MAAARLIEIMARKSQIP---HFPSCTNLIRGLIKIGQI 169
+R + T N I+ LC +G + +L+E + SQ CT L+ K G +
Sbjct: 222 IRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNV 281
Query: 170 DKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTI 229
+ ++ M D + N++I GLC G + +A + DM G +PD TYNT+
Sbjct: 282 VQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTL 341
Query: 230 IRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGC 289
I + +G F+EA G P I+Y V+I+ +C + RA E L M
Sbjct: 342 ISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSL 401
Query: 290 YPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDD 349
P+++ +N ++ + G V++ +LS G++PN T N LIH G
Sbjct: 402 LPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWW 461
Query: 350 VLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLC 409
V M T P TYN++L C G L A LY M+ C PDI+TY L+ GLC
Sbjct: 462 VKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLC 521
Query: 410 KEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIG 461
+G + + LL + T + V + I R+ A +Y + +
Sbjct: 522 WKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKWLA 573
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 129/276 (46%), Gaps = 5/276 (1%)
Query: 290 YPDIIT-YNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVD 348
Y D ++ ++S++ QG + + ++ G+ P +T+N L++ L GY + D
Sbjct: 117 YDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKAD 176
Query: 349 DVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGL 408
++ M E P V+YN ++ GLC +D+A+ L++TM P+ VT N ++ L
Sbjct: 177 GLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHAL 236
Query: 409 CKEGFV-DEGIQLLYLL---TGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGI 464
C++G + + +LL + + N +V I +D + G++ A E++ EM K +
Sbjct: 237 CQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNV 296
Query: 465 VPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQ 524
D + ++ + G C + A + +M K+ Y +I LCK+ K D A
Sbjct: 297 PADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACD 356
Query: 525 ALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDL 560
M PD+ Y +I+ + G V AN+
Sbjct: 357 LHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEF 392
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 72/141 (51%), Gaps = 3/141 (2%)
Query: 379 LDRAISLYSTMVSESCFPD---IVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVT 435
LDR SL ++ F + +++++ LC +G +D + L + + PGL+T
Sbjct: 99 LDRLASLRESVCQTKSFDYDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLIT 158
Query: 436 YNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMH 495
+N ++GL + G +E A L EM G P+ +++++L G C V+ +++A+ L M+
Sbjct: 159 HNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMN 218
Query: 496 KKDEKIKHTAYRCVILGLCKQ 516
K + ++ LC++
Sbjct: 219 KYGIRPNRVTCNIIVHALCQK 239
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 125/441 (28%), Positives = 202/441 (45%), Gaps = 24/441 (5%)
Query: 128 LCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPD 187
LC+ G+ A +I M + IP + + ++ L +++ + M G V D
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517
Query: 188 VITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWK 247
V T +++ CK G ++ A +M GC+P+ +TY +I + A ++
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577
Query: 248 DQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI-------------- 293
L +GC P ++TY+ LI+ C+ +A ++ E M PD+
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 637
Query: 294 --ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVL 351
+TY +L+ K EE ++ + G +PN + Y+ LI L G D +V
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 697
Query: 352 EIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKE 411
M+E P T TY+ +++ K D A + S M+ SC P++V Y ++ GLCK
Sbjct: 698 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 757
Query: 412 GFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITH 471
G DE +L+ ++ C P +VTY IDG +G +E+ EL M KG+ P+ +T+
Sbjct: 758 GKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTY 817
Query: 472 SSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTA-YRCVILGLCKQRKVDIAIQALDLMV 530
L C L+ A LL+EM K+ HTA YR VI G K+ + + LD +
Sbjct: 818 RVLIDHCCKNGALDVAHNLLEEM-KQTHWPTHTAGYRKVIEGFNKEFIESLGL--LDEIG 874
Query: 531 RSRCKPDEKIY----DALIKA 547
+ P +Y D LIKA
Sbjct: 875 QDDTAPFLSVYRLLIDNLIKA 895
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 131/536 (24%), Positives = 231/536 (43%), Gaps = 30/536 (5%)
Query: 59 SCLAQRRLQCRSFQGSAVIDRVNEVDHEDWGLESFERR-ESGELVDPGKPVKPPPFVRND 117
+CL Q L+ +++I R E+ + ++ F R + L GK + V +
Sbjct: 239 NCLIQAFLKADRLDSASLIHR--EMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETE 296
Query: 118 GFTNN-----KILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKG 172
F + K++ LC A + M S +P+ + + L+ G + Q+ +
Sbjct: 297 NFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRC 356
Query: 173 CKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRG 232
+++N+M+M G P N ++ C G A L++ M G P + YN +I
Sbjct: 357 KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGS 416
Query: 233 MF-DKGNFN-----EAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAM 286
+ DK + N A + + L G I + +C +A V+ +M
Sbjct: 417 ICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIG 476
Query: 287 EGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDG 346
+G PD TY+ ++++ E +L+ + G+ + TY ++ S G +
Sbjct: 477 QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQ 536
Query: 347 VDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLS 406
M E P VTY +++ K+ + A L+ TM+SE C P+IVTY+ L+
Sbjct: 537 ARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALID 596
Query: 407 GLCKEGFVDEGIQLLYLLTGT----------------NCSPGLVTYNIAIDGLARMGSME 450
G CK G V++ Q+ + G+ + P +VTY +DG + +E
Sbjct: 597 GHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVE 656
Query: 451 SAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVI 510
A++L M +G P++I + +L G C V +L+EA E+ EM + Y +I
Sbjct: 657 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716
Query: 511 LGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
K ++ D+A + L M+ + C P+ IY +I + G EA L Q + E
Sbjct: 717 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEE 772
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 184/413 (44%), Gaps = 56/413 (13%)
Query: 157 TNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSL 216
++ R L G+ +K +I M+ G +PD T + V+ LC ++ A L E+M
Sbjct: 452 SSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKR 511
Query: 217 SGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRK-GCPPYLITYTVLIELVCRYCGAI 275
G D TY TI+ F K E W +++R+ GC P ++TYT LI +
Sbjct: 512 GGLVADVYTY-TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS 570
Query: 276 RALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLI 335
A E+ E M EGC P+I+TY++L+ K G E+ + + P+
Sbjct: 571 YANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD-------- 622
Query: 336 HSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCF 395
VD + ++ S P VTY +L+G CKS ++ A L M E C
Sbjct: 623 -----------VDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCE 671
Query: 396 PDIVTYNTLLSGLCKEGFVDEGIQL------------LYLLTG----------------- 426
P+ + Y+ L+ GLCK G +DE ++ LY +
Sbjct: 672 PNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKV 731
Query: 427 ------TNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCG 480
+C+P +V Y IDGL ++G + A +L M KG P+ +T++++ GF
Sbjct: 732 LSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGM 791
Query: 481 VDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSR 533
+ ++E +ELL+ M K + YR +I CK +D+A L+ M ++
Sbjct: 792 IGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTH 844
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 131/493 (26%), Positives = 206/493 (41%), Gaps = 53/493 (10%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T +K+L LC ++ A L E M R + + T ++ K G I++ K
Sbjct: 482 DTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWF 541
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
N M G P+V+T +I K + A +L E M GC P+ +TY+ +I G
Sbjct: 542 NEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKA 601
Query: 237 GNFNEAVSFWKDQL-RKGCP---------------PYLITYTVLIELVCRYCGAIRALEV 280
G +A ++ K P P ++TY L++ C+ A ++
Sbjct: 602 GQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKL 661
Query: 281 LEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSS 340
L+ M+MEGC P+ I Y++L+ K G +E V + + G TY++LI
Sbjct: 662 LDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFK 721
Query: 341 HGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVT 400
D VL M E S P V Y M++GLCK G D A L M + C P++VT
Sbjct: 722 VKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVT 781
Query: 401 YNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEM- 459
Y ++ G G ++ ++LL + +P VTY + ID + G+++ A L EM
Sbjct: 782 YTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK 841
Query: 460 -----------------IGKGIVP-----DEITHSSLAWGFCGV-----------DQLEE 486
K + DEI A F V +LE
Sbjct: 842 QTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTA-PFLSVYRLLIDNLIKAQRLEM 900
Query: 487 AMELLKEMHKKDEKI--KHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDAL 544
A+ LL+E+ + + Y +I LC KV+ A Q M + P+ + + +L
Sbjct: 901 ALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSL 960
Query: 545 IKAVADSGMVKEA 557
IK + + + EA
Sbjct: 961 IKGLFRNSKISEA 973
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 177/409 (43%), Gaps = 57/409 (13%)
Query: 137 AARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDV-------- 188
A L E M + +P+ + + LI G K GQ++K C+I M S VPDV
Sbjct: 572 ANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYD 631
Query: 189 --------ITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFN 240
+T ++ G CK ++ A L++ MS+ GC P+ I Y+ +I G+ G +
Sbjct: 632 DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLD 691
Query: 241 EAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIR---ALEVLEDMAMEGCYPDIITYN 297
EA + G P L TY+ LI+ RY R A +VL M C P+++ Y
Sbjct: 692 EAQEVKTEMSEHGFPATLYTYSSLID---RYFKVKRQDLASKVLSKMLENSCAPNVVIYT 748
Query: 298 SLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNET 357
++ K G +E Y ++ + +G QPN VTY +I G + ++LE M
Sbjct: 749 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 808
Query: 358 SSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKE-----G 412
P VTY ++++ CK+G LD A +L M Y ++ G KE G
Sbjct: 809 GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLG 868
Query: 413 FVDE--------------------------GIQLLYLLTGTNCSPGLV----TYNIAIDG 442
+DE + L L S LV TYN I+
Sbjct: 869 LLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIES 928
Query: 443 LARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELL 491
L +E+A +L+SEM KG++P+ + SL G ++ EA+ LL
Sbjct: 929 LCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 157/364 (43%), Gaps = 14/364 (3%)
Query: 115 RNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCK 174
R + T +L C R+ A +L++ M+ + P+ LI GL K+G++D+ +
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 695
Query: 175 IINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMF 234
+ M G + T + +I K A ++ M + C+P+ + Y +I G+
Sbjct: 696 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 755
Query: 235 DKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDII 294
G +EA + KGC P ++TYT +I+ LE+LE M +G P+ +
Sbjct: 756 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYV 815
Query: 295 TYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIM 354
TY L+ K G + + ++ + + Y +I + + + + + EI
Sbjct: 816 TYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE-FIESLGLLDEIG 874
Query: 355 NETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMV--SESCFPDIVTYNTLLSGLCKEG 412
+ ++P V Y ++++ L K+ L+ A+ L + S + TYN+L+ LC
Sbjct: 875 QDDTAPFLSV-YRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLAN 933
Query: 413 FVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHS 472
V+ QL +T P + ++ I GL R + A ++ D I+H
Sbjct: 934 KVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL----------LLLDFISHM 983
Query: 473 SLAW 476
+ W
Sbjct: 984 EIQW 987
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 137/345 (39%), Gaps = 44/345 (12%)
Query: 263 VLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSR 322
VL+ CR ALE L + P TYN L+ K + L+ +
Sbjct: 205 VLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLA 264
Query: 323 GMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRA 382
++ + T +SL G W + L ++ + P V Y +++GLC++ L + A
Sbjct: 265 NLRMDGFTLRCFAYSLCKVGKW---REALTLVETENFVPDTVFYTKLISGLCEASLFEEA 321
Query: 383 ISLYSTMVSESCFPDIVTYNTLLSG----------------------------------- 407
+ + M + SC P++VTY+TLL G
Sbjct: 322 MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHA 381
Query: 408 LCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLA------RMGSMESAKELYSEMIG 461
C G +LL + PG V YNI I + ++ A++ YSEM+
Sbjct: 382 YCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLA 441
Query: 462 KGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDI 521
G+V ++I SS C + E+A +++EM + + Y V+ LC K+++
Sbjct: 442 AGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMEL 501
Query: 522 AIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
A + M R D Y ++ + +G++++A + E
Sbjct: 502 AFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 84/215 (39%), Gaps = 32/215 (14%)
Query: 332 NTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMV- 390
N L+ +G + + L + + P+R TYN ++ K+ LD A ++ M
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 391 -------------------------------SESCFPDIVTYNTLLSGLCKEGFVDEGIQ 419
+E+ PD V Y L+SGLC+ +E +
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMD 323
Query: 420 LLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFC 479
L + T+C P +VTY+ + G + K + + M+ +G P +SL +C
Sbjct: 324 FLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYC 383
Query: 480 GVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLC 514
A +LLK+M K + Y +I +C
Sbjct: 384 TSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC 418
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 170/320 (53%), Gaps = 4/320 (1%)
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN 238
MV +G PDV+T ++ GLC G + A+ LV+ M G P Y TII G+ G+
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 239 FNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNS 298
A++ +++ Y +I+ +C+ I A + +M +G +PD+ITY+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 299 LVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETS 358
++ + G + + ++ +++ R + P+ VT++ LI++L G +++ M
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 359 SPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGI 418
PT +TYN M++G CK L+ A + +M S+SC PD+VT++TL++G CK VD G+
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 419 QLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGF 478
++ + VTY I G ++G +++A++L + MI G+ P+ IT S+
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Query: 479 CGVDQLEEAMELLKEMHKKD 498
C +L +A +L+++ K +
Sbjct: 297 CSKKELRKAFAILEDLQKSE 316
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 164/319 (51%), Gaps = 4/319 (1%)
Query: 214 MSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCG 273
M +GC PD +T+ T++ G+ +G +A++ + +G PY +I +C+
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPY----GTIINGLCKMGD 56
Query: 274 AIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNT 333
AL +L M ++ YN+++ K G + + + + +G+ P+ +TY+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 334 LIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSES 393
+I S G W + +L M E P VT++ ++N L K G + A +Y M+
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 394 CFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAK 453
FP +TYN+++ G CK+ +++ ++L + +CSP +VT++ I+G + +++
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 454 ELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGL 513
E++ EM +GIV + +T+++L GFC V L+ A +LL M + ++ ++ L
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Query: 514 CKQRKVDIAIQALDLMVRS 532
C ++++ A L+ + +S
Sbjct: 297 CSKKELRKAFAILEDLQKS 315
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 150/308 (48%), Gaps = 4/308 (1%)
Query: 250 LRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVY 309
+ GC P ++T+T L+ +C ++AL +++ M EG P Y ++++ K G
Sbjct: 2 VETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDT 57
Query: 310 EETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIM 369
E ++S + ++ + V YN +I L G+ ++ M++ P +TY+ M
Sbjct: 58 ESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGM 117
Query: 370 LNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNC 429
++ C+SG A L M+ PD+VT++ L++ L KEG V E ++ +
Sbjct: 118 IDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI 177
Query: 430 SPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAME 489
P +TYN IDG + + AK + M K PD +T S+L G+C +++ ME
Sbjct: 178 FPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGME 237
Query: 490 LLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVA 549
+ EMH++ Y +I G C+ +D A L++M+ S P+ + +++ ++
Sbjct: 238 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLC 297
Query: 550 DSGMVKEA 557
+++A
Sbjct: 298 SKKELRKA 305
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 140/282 (49%), Gaps = 4/282 (1%)
Query: 284 MAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGY 343
M GC PD++T+ +L++ +G + ++ ++ G QP Y T+I+ L G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 344 WDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNT 403
+ ++L M ET V YN +++ LCK G A +L++ M + FPD++TY+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 404 LLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKG 463
++ C+ G + QLL + +P +VT++ I+ L + G + A+E+Y +M+ +G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 464 IVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAI 523
I P IT++S+ GFC D+L +A +L M K + +I G CK ++VD +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 524 QALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLI 565
+ M R + Y LI G + A DL +I
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMI 278
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 152/312 (48%), Gaps = 14/312 (4%)
Query: 115 RNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCK 174
R D T ++ LC GR++ A L++ M + P+ +I GL K+G +
Sbjct: 7 RPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPY----GTIINGLCKMGDTESALN 62
Query: 175 IINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMF 234
+++ M + V+ N +I LCK G+ A +L +M G PD ITY+ +I
Sbjct: 63 LLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFC 122
Query: 235 DKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDII 294
G + +A +D + + P ++T++ LI + + A E+ DM G +P I
Sbjct: 123 RSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTI 182
Query: 295 TYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDG--VDDVLE 352
TYNS++ KQ + ++ ++ S+ P+ VT++TLI +GY VD+ +E
Sbjct: 183 TYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLI-----NGYCKAKRVDNGME 237
Query: 353 I---MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLC 409
I M+ VTY +++G C+ G LD A L + M+S P+ +T+ ++L+ LC
Sbjct: 238 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLC 297
Query: 410 KEGFVDEGIQLL 421
+ + + +L
Sbjct: 298 SKKELRKAFAIL 309
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 113/246 (45%), Gaps = 13/246 (5%)
Query: 74 SAVIDRVNEVDHEDWGLESFERRESGELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGR 133
+A+IDR+ + H F E+ D G + D T + ++ + C GR
Sbjct: 80 NAIIDRLCKDGHHIHAQNLFT-----EMHDKG--------IFPDVITYSGMIDSFCRSGR 126
Query: 134 LMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNM 193
A +L+ M + P + + LI L+K G++ + +I M+ G P IT N
Sbjct: 127 WTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNS 186
Query: 194 VIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKG 253
+I G CK+ L A +++ M+ CSPD +T++T+I G + + + + R+G
Sbjct: 187 MIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 246
Query: 254 CPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETY 313
+TYT LI C+ A ++L M G P+ IT+ S+++ + + +
Sbjct: 247 IVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAF 306
Query: 314 LVISNL 319
++ +L
Sbjct: 307 AILEDL 312
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 85/186 (45%), Gaps = 4/186 (2%)
Query: 389 MVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGS 448
MV C PD+VT+ TL++GLC EG V + + L+ + P Y I+GL +MG
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 449 MESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRC 508
ESA L S+M I + ++++ C A L EMH K Y
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 509 VILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWK 568
+I C+ + A Q L M+ + PD + ALI A+ G V EA +++ ++
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 569 ILKTEI 574
I T I
Sbjct: 177 IFPTTI 182
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 50/101 (49%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T + ++ C R+ + M R+ + + + T LI G ++G +D ++
Sbjct: 215 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 274
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLS 217
N+M+ SG P+ IT ++ LC + L+ A ++ED+ S
Sbjct: 275 NVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKS 315
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/486 (26%), Positives = 213/486 (43%), Gaps = 41/486 (8%)
Query: 118 GFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIIN 177
F N ++ L A M +F S + L+ +++ + ++
Sbjct: 72 AFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLA 131
Query: 178 IMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKG 237
+M+ G +V N+++ GLC+ AV L+ +M + PD +YNT+IRG +
Sbjct: 132 LMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGK 191
Query: 238 NFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI---- 293
+A+ + GC L+T+ +LI+ C+ A+ L++M G D+
Sbjct: 192 ELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYT 251
Query: 294 -------------------------------ITYNSLVSFTAKQGVYEETYLVISNLLSR 322
ITYN+L+ K G +E + ++ R
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIER 311
Query: 323 GMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRA 382
G++PN TY LI L G +L +M E P VTYNI++N LCK GL+ A
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA 371
Query: 383 ISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLL--TGTNCSPGLVTYNIAI 440
+ + M PD +TYN LL GLC +G +DE +LLYL+ + P +++YN I
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431
Query: 441 DGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEK 500
GL + + A ++Y ++ K D +T + L + +AMEL K++ D K
Sbjct: 432 HGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQIS--DSK 489
Query: 501 IKHTA--YRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEAN 558
I + Y +I G CK +++A L M S +P Y+ L+ ++ G + +A
Sbjct: 490 IVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAW 549
Query: 559 DLHQRL 564
L + +
Sbjct: 550 RLFEEM 555
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 206/451 (45%), Gaps = 6/451 (1%)
Query: 124 ILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSG 183
++ C G++ A ++ M T+LIRG G++D+G + + ++ G
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 184 GVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAV 243
P IT N +I G CK G LK A ++ E M G P+ TY +I G+ G EA+
Sbjct: 278 DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337
Query: 244 SFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFT 303
+ K P +TY ++I +C+ A+E++E M PD ITYN L+
Sbjct: 338 QLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL 397
Query: 304 AKQGVYEET----YLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS 359
+G +E YL++ + S P+ ++YN LIH L D+ +++ E
Sbjct: 398 CAKGDLDEASKLLYLMLKD--SSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLG 455
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQ 419
RVT NI+LN K+G +++A+ L+ + + TY ++ G CK G ++
Sbjct: 456 AGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKG 515
Query: 420 LLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFC 479
LL + + P + YN + L + GS++ A L+ EM PD ++ + + G
Sbjct: 516 LLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSL 575
Query: 480 GVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEK 539
++ A LL M + Y +I K +D AI D MV S +PD
Sbjct: 576 KAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAH 635
Query: 540 IYDALIKAVADSGMVKEANDLHQRLIEWKIL 570
I D+++K G + +L ++L++ I+
Sbjct: 636 ICDSVLKYCISQGETDKLTELVKKLVDKDIV 666
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 168/356 (47%), Gaps = 2/356 (0%)
Query: 218 GCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRA 277
G + + +N +++G+ +AVS ++ R P + +Y +I C +A
Sbjct: 137 GFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKA 196
Query: 278 LEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHS 337
LE+ +M GC ++T+ L+ K G +E + + G++ + V Y +LI
Sbjct: 197 LELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRG 256
Query: 338 LSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPD 397
G D + + + E P +TYN ++ G CK G L A ++ M+ P+
Sbjct: 257 FCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPN 316
Query: 398 IVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYS 457
+ TY L+ GLC G E +QLL L+ + P VTYNI I+ L + G + A E+
Sbjct: 317 VYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVE 376
Query: 458 EMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKH--TAYRCVILGLCK 515
M + PD IT++ L G C L+EA +LL M K +Y +I GLCK
Sbjct: 377 LMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCK 436
Query: 516 QRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKILK 571
+ ++ A+ DL+V D + L+ + +G V +A +L +++ + KI++
Sbjct: 437 ENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVR 492
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/445 (26%), Positives = 199/445 (44%), Gaps = 42/445 (9%)
Query: 99 GELVDPGKPVKPPPFVRND---GFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPS 155
GEL D GK + R D T N +++ C G+L A+ + E M + P+ +
Sbjct: 261 GEL-DRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYT 319
Query: 156 CTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMS 215
T LI GL +G+ + +++N+M+ P+ +T N++I LCK G + AV++VE M
Sbjct: 320 YTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMK 379
Query: 216 LSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKG--CPPYLITYTVLIELVCRYCG 273
PD ITYN ++ G+ KG+ +EA L+ P +I+Y LI +C+
Sbjct: 380 KRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENR 439
Query: 274 AIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVY------------------EETYL- 314
+AL++ + + + D +T N L++ T K G +TY
Sbjct: 440 LHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTA 499
Query: 315 VISNLLSRGM----------------QPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETS 358
+I GM QP+ YN L+ SL G D + E M +
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDN 559
Query: 359 SPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGI 418
+ P V++NIM++G K+G + A SL M PD+ TY+ L++ K G++DE I
Sbjct: 560 NFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAI 619
Query: 419 QLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPD-EITHSSLAWG 477
+ + P + + G + EL +++ K IV D E+T + + +
Sbjct: 620 SFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYM 679
Query: 478 FCGVDQLEEAMELLKEMHKKDEKIK 502
++ A LL+ K+E+ K
Sbjct: 680 CNSSANMDLAKRLLRVTDDKEERDK 704
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 184/394 (46%), Gaps = 13/394 (3%)
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRG--YLKSAVDLVEDMSLSGCSPDAITYNTIIR 231
K++N V S V + LC+ LK+AV + + SG S A N ++
Sbjct: 22 KLLNPRVYSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSL-AFAGNNLMA 80
Query: 232 GMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYP 291
+ N A SF++ L ++ + L+E + A VL M G
Sbjct: 81 KLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAF 140
Query: 292 DIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDG--VDD 349
++ +N L+ + + ++ + + P+ +YNT+I G+ +G ++
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVI-----RGFCEGKELEK 195
Query: 350 VLEIMNETSSPP---TRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLS 406
LE+ NE + VT+ I+++ CK+G +D A+ M D+V Y +L+
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255
Query: 407 GLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVP 466
G C G +D G L + SP +TYN I G ++G ++ A E++ MI +G+ P
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315
Query: 467 DEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQAL 526
+ T++ L G CGV + +EA++LL M +KDE+ Y +I LCK V A++ +
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIV 375
Query: 527 DLMVRSRCKPDEKIYDALIKAVADSGMVKEANDL 560
+LM + R +PD Y+ L+ + G + EA+ L
Sbjct: 376 ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKL 409
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 83/185 (44%)
Query: 382 AISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAID 441
A + + M+ ++ +N LL GLC+ + + LL + + P + +YN I
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIR 185
Query: 442 GLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKI 501
G +E A EL +EM G G +T L FC +++EAM LKEM +
Sbjct: 186 GFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEA 245
Query: 502 KHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLH 561
Y +I G C ++D D ++ P Y+ LI+ G +KEA+++
Sbjct: 246 DLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIF 305
Query: 562 QRLIE 566
+ +IE
Sbjct: 306 EFMIE 310
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 201/427 (47%), Gaps = 6/427 (1%)
Query: 139 RLIEIMARKSQIPH-FPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGG 197
R E K I H F + L R L K G D ++ M G P+ ++
Sbjct: 88 RFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSS 147
Query: 198 LCKRGYLKSAVDLV-EDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPP 256
++G L A L+ + + GC + N+++ + +A+ + + LR
Sbjct: 148 FAEKGKLHFATALLLQSFEVEGC---CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN 204
Query: 257 YLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVI 316
T+ +LI +C A +ALE+L M+ GC PDI+TYN+L+ K + +
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264
Query: 317 SNLLSRGM-QPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCK 375
++ S + P+ VTY ++I G +L+ M PT VT+N++++G K
Sbjct: 265 KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Query: 376 SGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVT 435
+G + A + M+S CFPD+VT+ +L+ G C+ G V +G +L + P T
Sbjct: 325 AGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFT 384
Query: 436 YNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMH 495
Y+I I+ L + A+EL ++ K I+P ++ + GFC ++ EA +++EM
Sbjct: 385 YSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEME 444
Query: 496 KKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVK 555
KK K + +I+G C + ++ A+ MV C PD+ +L+ + +GM K
Sbjct: 445 KKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAK 504
Query: 556 EANDLHQ 562
EA L+Q
Sbjct: 505 EAYHLNQ 511
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 182/369 (49%), Gaps = 18/369 (4%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTN------LIRGLIKIGQIDKGCKI 175
N +L L R+ A +L + R F SC + LIRGL +G+ +K ++
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLR------FQSCNDTKTFNILIRGLCGVGKAEKALEL 228
Query: 176 INIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDM-SLSGCSPDAITYNTIIRGMF 234
+ +M G PD++T N +I G CK L A ++ +D+ S S CSPD +TY ++I G
Sbjct: 229 LGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYC 288
Query: 235 DKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDII 294
G EA S D LR G P +T+ VL++ + + A E+ M GC+PD++
Sbjct: 289 KAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVV 348
Query: 295 TYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIM 354
T+ SL+ + G + + + + +RGM PNA TY+ LI++L + ++L +
Sbjct: 349 TFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQL 408
Query: 355 NETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFV 414
P YN +++G CK+G ++ A + M + C PD +T+ L+ G C +G +
Sbjct: 409 ASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRM 468
Query: 415 DEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKG----IVPDEIT 470
E + + + + CSP +T + + L + G + A L +++ KG +VP E
Sbjct: 469 FEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-NQIARKGQSNNVVPLETK 527
Query: 471 HSSLAWGFC 479
++ C
Sbjct: 528 TANATLAAC 536
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 149/307 (48%), Gaps = 3/307 (0%)
Query: 116 NDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKI 175
ND T N +++ LC G+ A L+ +M+ P + LI+G K +++K ++
Sbjct: 204 NDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEM 263
Query: 176 INIMVMSGGV--PDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
V SG V PDV+T +I G CK G ++ A L++DM G P +T+N ++ G
Sbjct: 264 FKD-VKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGY 322
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
G A + GC P ++T+T LI+ CR + + E+M G +P+
Sbjct: 323 AKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNA 382
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
TY+ L++ + + ++ L S+ + P YN +I G + + ++E
Sbjct: 383 FTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEE 442
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
M + P ++T+ I++ G C G + A+S++ MV+ C PD +T ++LLS L K G
Sbjct: 443 MEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGM 502
Query: 414 VDEGIQL 420
E L
Sbjct: 503 AKEAYHL 509
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 177/380 (46%), Gaps = 9/380 (2%)
Query: 190 TCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQ 249
T N++ LCK G A + E M G SP+ ++ +KG + A +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 250 LR-KGCPPYLITYTVLIELVC--RYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQ 306
+GC ++ ++L LV R A++ + E + + C D T+N L+
Sbjct: 165 FEVEGC--CMVVNSLLNTLVKLDRVEDAMKLFD--EHLRFQSC-NDTKTFNILIRGLCGV 219
Query: 307 GVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVL-EIMNETSSPPTRVT 365
G E+ ++ + G +P+ VTYNTLI + ++ ++ + + P VT
Sbjct: 220 GKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVT 279
Query: 366 YNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLT 425
Y M++G CK+G + A SL M+ +P VT+N L+ G K G + ++ +
Sbjct: 280 YTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMI 339
Query: 426 GTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLE 485
C P +VT+ IDG R+G + L+ EM +G+ P+ T+S L C ++L
Sbjct: 340 SFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLL 399
Query: 486 EAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALI 545
+A ELL ++ KD + Y VI G CK KV+ A ++ M + +CKPD+ + LI
Sbjct: 400 KARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILI 459
Query: 546 KAVADSGMVKEANDLHQRLI 565
G + EA + +++
Sbjct: 460 IGHCMKGRMFEAVSIFHKMV 479
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 2/210 (0%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T N ++ G ++ A + M P + T+LI G ++GQ+ +G ++ M
Sbjct: 314 TFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEM 373
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
G P+ T +++I LC L A +L+ ++ P YN +I G G
Sbjct: 374 NARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKV 433
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
NEA ++ +K C P IT+T+LI C A+ + M GC PD IT +SL
Sbjct: 434 NEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSL 493
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAV 329
+S K G+ +E Y + N ++R Q N V
Sbjct: 494 LSCLLKAGMAKEAYHL--NQIARKGQSNNV 521
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 104/237 (43%)
Query: 106 KPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIK 165
K VK D T ++ C G++ A+ L++ M R P + L+ G K
Sbjct: 265 KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Query: 166 IGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAIT 225
G++ +I M+ G PDV+T +I G C+ G + L E+M+ G P+A T
Sbjct: 325 AGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFT 384
Query: 226 YNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMA 285
Y+ +I + ++ +A K P Y +I+ C+ A ++E+M
Sbjct: 385 YSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEME 444
Query: 286 MEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHG 342
+ C PD IT+ L+ +G E + +++ G P+ +T ++L+ L G
Sbjct: 445 KKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAG 501
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 105/240 (43%), Gaps = 5/240 (2%)
Query: 330 TYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLY-ST 388
TYN L SL G D + E M P +++ + G L A +L +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 389 MVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGS 448
E C + N+LL+ L K V++ ++L T+NI I GL +G
Sbjct: 165 FEVEGC---CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGK 221
Query: 449 MESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDE-KIKHTAYR 507
E A EL M G G PD +T+++L GFC ++L +A E+ K++ Y
Sbjct: 222 AEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYT 281
Query: 508 CVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEW 567
+I G CK K+ A LD M+R P ++ L+ A +G + A ++ ++I +
Sbjct: 282 SMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISF 341
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 3/211 (1%)
Query: 365 TYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLL 424
TYN++ LCK+GL D A ++ M S+ P+ L+S ++G + LL L
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--L 162
Query: 425 TGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQL 484
+ N ++ L ++ +E A +L+ E + D T + L G CGV +
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 485 EEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQAL-DLMVRSRCKPDEKIYDA 543
E+A+ELL M + Y +I G CK +++ A + D+ S C PD Y +
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282
Query: 544 LIKAVADSGMVKEANDLHQRLIEWKILKTEI 574
+I +G ++EA+ L ++ I T +
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNV 313
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 201/427 (47%), Gaps = 6/427 (1%)
Query: 139 RLIEIMARKSQIPH-FPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGG 197
R E K I H F + L R L K G D ++ M G P+ ++
Sbjct: 88 RFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSS 147
Query: 198 LCKRGYLKSAVDLV-EDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPP 256
++G L A L+ + + GC + N+++ + +A+ + + LR
Sbjct: 148 FAEKGKLHFATALLLQSFEVEGC---CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN 204
Query: 257 YLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVI 316
T+ +LI +C A +ALE+L M+ GC PDI+TYN+L+ K + +
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264
Query: 317 SNLLSRGM-QPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCK 375
++ S + P+ VTY ++I G +L+ M PT VT+N++++G K
Sbjct: 265 KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Query: 376 SGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVT 435
+G + A + M+S CFPD+VT+ +L+ G C+ G V +G +L + P T
Sbjct: 325 AGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFT 384
Query: 436 YNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMH 495
Y+I I+ L + A+EL ++ K I+P ++ + GFC ++ EA +++EM
Sbjct: 385 YSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEME 444
Query: 496 KKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVK 555
KK K + +I+G C + ++ A+ MV C PD+ +L+ + +GM K
Sbjct: 445 KKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAK 504
Query: 556 EANDLHQ 562
EA L+Q
Sbjct: 505 EAYHLNQ 511
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 182/369 (49%), Gaps = 18/369 (4%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTN------LIRGLIKIGQIDKGCKI 175
N +L L R+ A +L + R F SC + LIRGL +G+ +K ++
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLR------FQSCNDTKTFNILIRGLCGVGKAEKALEL 228
Query: 176 INIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDM-SLSGCSPDAITYNTIIRGMF 234
+ +M G PD++T N +I G CK L A ++ +D+ S S CSPD +TY ++I G
Sbjct: 229 LGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYC 288
Query: 235 DKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDII 294
G EA S D LR G P +T+ VL++ + + A E+ M GC+PD++
Sbjct: 289 KAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVV 348
Query: 295 TYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIM 354
T+ SL+ + G + + + + +RGM PNA TY+ LI++L + ++L +
Sbjct: 349 TFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQL 408
Query: 355 NETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFV 414
P YN +++G CK+G ++ A + M + C PD +T+ L+ G C +G +
Sbjct: 409 ASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRM 468
Query: 415 DEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKG----IVPDEIT 470
E + + + + CSP +T + + L + G + A L +++ KG +VP E
Sbjct: 469 FEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-NQIARKGQSNNVVPLETK 527
Query: 471 HSSLAWGFC 479
++ C
Sbjct: 528 TANATLAAC 536
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 149/307 (48%), Gaps = 3/307 (0%)
Query: 116 NDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKI 175
ND T N +++ LC G+ A L+ +M+ P + LI+G K +++K ++
Sbjct: 204 NDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEM 263
Query: 176 INIMVMSGGV--PDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
V SG V PDV+T +I G CK G ++ A L++DM G P +T+N ++ G
Sbjct: 264 FKD-VKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGY 322
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
G A + GC P ++T+T LI+ CR + + E+M G +P+
Sbjct: 323 AKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNA 382
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
TY+ L++ + + ++ L S+ + P YN +I G + + ++E
Sbjct: 383 FTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEE 442
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
M + P ++T+ I++ G C G + A+S++ MV+ C PD +T ++LLS L K G
Sbjct: 443 MEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGM 502
Query: 414 VDEGIQL 420
E L
Sbjct: 503 AKEAYHL 509
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 177/380 (46%), Gaps = 9/380 (2%)
Query: 190 TCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQ 249
T N++ LCK G A + E M G SP+ ++ +KG + A +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 250 LR-KGCPPYLITYTVLIELVC--RYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQ 306
+GC ++ ++L LV R A++ + E + + C D T+N L+
Sbjct: 165 FEVEGC--CMVVNSLLNTLVKLDRVEDAMKLFD--EHLRFQSC-NDTKTFNILIRGLCGV 219
Query: 307 GVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVL-EIMNETSSPPTRVT 365
G E+ ++ + G +P+ VTYNTLI + ++ ++ + + P VT
Sbjct: 220 GKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVT 279
Query: 366 YNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLT 425
Y M++G CK+G + A SL M+ +P VT+N L+ G K G + ++ +
Sbjct: 280 YTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMI 339
Query: 426 GTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLE 485
C P +VT+ IDG R+G + L+ EM +G+ P+ T+S L C ++L
Sbjct: 340 SFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLL 399
Query: 486 EAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALI 545
+A ELL ++ KD + Y VI G CK KV+ A ++ M + +CKPD+ + LI
Sbjct: 400 KARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILI 459
Query: 546 KAVADSGMVKEANDLHQRLI 565
G + EA + +++
Sbjct: 460 IGHCMKGRMFEAVSIFHKMV 479
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 2/210 (0%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T N ++ G ++ A + M P + T+LI G ++GQ+ +G ++ M
Sbjct: 314 TFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEM 373
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
G P+ T +++I LC L A +L+ ++ P YN +I G G
Sbjct: 374 NARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKV 433
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
NEA ++ +K C P IT+T+LI C A+ + M GC PD IT +SL
Sbjct: 434 NEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSL 493
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAV 329
+S K G+ +E Y + N ++R Q N V
Sbjct: 494 LSCLLKAGMAKEAYHL--NQIARKGQSNNV 521
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 104/237 (43%)
Query: 106 KPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIK 165
K VK D T ++ C G++ A+ L++ M R P + L+ G K
Sbjct: 265 KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Query: 166 IGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAIT 225
G++ +I M+ G PDV+T +I G C+ G + L E+M+ G P+A T
Sbjct: 325 AGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFT 384
Query: 226 YNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMA 285
Y+ +I + ++ +A K P Y +I+ C+ A ++E+M
Sbjct: 385 YSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEME 444
Query: 286 MEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHG 342
+ C PD IT+ L+ +G E + +++ G P+ +T ++L+ L G
Sbjct: 445 KKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAG 501
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 105/240 (43%), Gaps = 5/240 (2%)
Query: 330 TYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLY-ST 388
TYN L SL G D + E M P +++ + G L A +L +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 389 MVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGS 448
E C + N+LL+ L K V++ ++L T+NI I GL +G
Sbjct: 165 FEVEGC---CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGK 221
Query: 449 MESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDE-KIKHTAYR 507
E A EL M G G PD +T+++L GFC ++L +A E+ K++ Y
Sbjct: 222 AEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYT 281
Query: 508 CVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEW 567
+I G CK K+ A LD M+R P ++ L+ A +G + A ++ ++I +
Sbjct: 282 SMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISF 341
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 3/211 (1%)
Query: 365 TYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLL 424
TYN++ LCK+GL D A ++ M S+ P+ L+S ++G + LL L
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--L 162
Query: 425 TGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQL 484
+ N ++ L ++ +E A +L+ E + D T + L G CGV +
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 485 EEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQAL-DLMVRSRCKPDEKIYDA 543
E+A+ELL M + Y +I G CK +++ A + D+ S C PD Y +
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282
Query: 544 LIKAVADSGMVKEANDLHQRLIEWKILKTEI 574
+I +G ++EA+ L ++ I T +
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNV 313
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 128/485 (26%), Positives = 213/485 (43%), Gaps = 43/485 (8%)
Query: 124 ILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSG 183
++ C RG + A L ++M ++ P + + LI G K G + G K+ + + G
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351
Query: 184 GVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAV 243
DV+ + I K G L +A + + M G SP+ +TY +I+G+ G EA
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411
Query: 244 SFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRA-LEVLEDMAMEGCYPDIITYNSLVSF 302
+ L++G P ++TY+ LI+ C+ CG +R+ + EDM G PD++ Y LV
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCK-CGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG 470
Query: 303 TAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPT 362
+KQG+ +L + ++ N V +N+LI +D V +M P
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530
Query: 363 RVTY------NIMLNGLCKS-----GL------------------------------LDR 381
T+ +IM + CK GL ++
Sbjct: 531 VATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIED 590
Query: 382 AISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAID 441
A ++ ++ PDIVTYNT++ G C +DE ++ LL T P VT I I
Sbjct: 591 ASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIH 650
Query: 442 GLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKI 501
L + M+ A ++S M KG P+ +T+ L F +E + +L +EM +K
Sbjct: 651 VLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISP 710
Query: 502 KHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLH 561
+Y +I GLCK+ +VD A + ++ PD Y LI+ G + EA L+
Sbjct: 711 SIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLY 770
Query: 562 QRLIE 566
+ ++
Sbjct: 771 EHMLR 775
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/510 (24%), Positives = 221/510 (43%), Gaps = 50/510 (9%)
Query: 111 PPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQID 170
P V GF +L L +G + A ++ + SC +++GL + QI+
Sbjct: 214 PSGVSAHGF----VLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIE 268
Query: 171 KGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTII 230
+++++++ G P+V+T +I G CKRG + A DL + M G PD I Y+T+I
Sbjct: 269 VASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLI 328
Query: 231 RGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCY 290
G F G + L KG ++ ++ I++ + A V + M +G
Sbjct: 329 DGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS 388
Query: 291 PDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDV 350
P+++TY L+ + G E + + +L RGM+P+ VTY++LI G +
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448
Query: 351 LEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCK 410
E M + PP V Y ++++GL K GL+ A+ M+ +S ++V +N+L+ G C+
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Query: 411 EGFVDE-----------------------------------------GIQLLYLLTGTNC 429
DE G+QL L+
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKI 568
Query: 430 SPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAME 489
S + N+ I L + +E A + ++ +I + PD +T++++ G+C + +L+EA
Sbjct: 569 SADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAER 628
Query: 490 LLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALI---- 545
+ + + +I LCK +D AI+ +M KP+ Y L+
Sbjct: 629 IFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFS 688
Query: 546 KAVADSGMVKEANDLHQRLIEWKILKTEII 575
K+V G K ++ ++ I I+ II
Sbjct: 689 KSVDIEGSFKLFEEMQEKGISPSIVSYSII 718
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 183/387 (47%), Gaps = 6/387 (1%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T +++ LC GR+ A + + ++ P + ++LI G K G + G + M
Sbjct: 393 TYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
+ G PDV+ +++ GL K+G + A+ M + + +N++I G F
Sbjct: 453 IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRF 512
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIEL------VCRYCGAIRALEVLEDMAMEGCYPDI 293
+EA+ ++ G P + T+T ++ + C++ L++ + M DI
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADI 572
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
N ++ K E+ +NL+ M+P+ VTYNT+I S D + + E+
Sbjct: 573 AVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFEL 632
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
+ T P VT I+++ LCK+ +D AI ++S M + P+ VTY L+ K
Sbjct: 633 LKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVD 692
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSS 473
++ +L + SP +V+Y+I IDGL + G ++ A ++ + I ++PD + ++
Sbjct: 693 IEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAI 752
Query: 474 LAWGFCGVDQLEEAMELLKEMHKKDEK 500
L G+C V +L EA L + M + K
Sbjct: 753 LIRGYCKVGRLVEAALLYEHMLRNGVK 779
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/458 (24%), Positives = 205/458 (44%), Gaps = 15/458 (3%)
Query: 123 KILQNLCTRGRLMAAARLIEIMARKSQ----IPHFPSCTNLIRGLIKIGQIDKGCKIINI 178
K L C R ++ A +EI +Q IP S ++ LI ++D +
Sbjct: 150 KFLMECCCRYGMVDKA--LEIFVYSTQLGVVIPQ-DSVYRMLNSLIGSDRVDLIADHFDK 206
Query: 179 MVMSGGVPDVITCN-MVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKG 237
+ G P ++ + V+ L +G + A+D + G ++ N +++G+
Sbjct: 207 LCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVD 265
Query: 238 NFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYN 297
A L G P ++T+ LI C+ RA ++ + M G PD+I Y+
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325
Query: 298 SLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNET 357
+L+ K G+ + + S L +G++ + V +++ I G V + M
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385
Query: 358 SSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEG 417
P VTY I++ GLC+ G + A +Y ++ P IVTY++L+ G CK G + G
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 418 IQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWG 477
L + P +V Y + +DGL++ G M A +M+G+ I + + +SL G
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Query: 478 FCGVDQLEEAMELLKEMH----KKDEKIKHTAYRCVIL--GLCKQRKVDIAIQALDLMVR 531
+C +++ +EA+++ + M K D T R I+ CK K I +Q DLM R
Sbjct: 506 WCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQR 565
Query: 532 SRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKI 569
++ D + + +I + +++A+ LIE K+
Sbjct: 566 NKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKM 603
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 189/419 (45%), Gaps = 6/419 (1%)
Query: 132 GRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITC 191
G L A+ + + M + P+ + T LI+GL + G+I + + ++ G P ++T
Sbjct: 370 GDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTY 429
Query: 192 NMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLR 251
+ +I G CK G L+S L EDM G PD + Y ++ G+ +G A+ F L
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLG 489
Query: 252 KGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVY-E 310
+ ++ + LI+ CR AL+V M + G PD+ T+ +++ + + + +
Sbjct: 490 QSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCK 549
Query: 311 ETYLVISNLLSRGMQPNAVTY-----NTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVT 365
I L MQ N ++ N +IH L + + E P VT
Sbjct: 550 HMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVT 609
Query: 366 YNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLT 425
YN M+ G C LD A ++ + P+ VT L+ LCK +D I++ ++
Sbjct: 610 YNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA 669
Query: 426 GTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLE 485
P VTY +D ++ +E + +L+ EM KGI P +++S + G C +++
Sbjct: 670 EKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVD 729
Query: 486 EAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDAL 544
EA + + AY +I G CK ++ A + M+R+ KPD+ + AL
Sbjct: 730 EATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 788
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 85/186 (45%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T N ++ C+ RL A R+ E++ P+ + T LI L K +D ++
Sbjct: 606 DIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF 665
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
+IM G P+ +T ++ K ++ + L E+M G SP ++Y+ II G+ +
Sbjct: 666 SIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKR 725
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
G +EA + + + P ++ Y +LI C+ + A + E M G PD +
Sbjct: 726 GRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQ 785
Query: 297 NSLVSF 302
+L +
Sbjct: 786 RALSEY 791
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 132/499 (26%), Positives = 224/499 (44%), Gaps = 35/499 (7%)
Query: 100 ELVD--PGKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCT 157
EL D P K KP + FT +++ C G L+ M +P+
Sbjct: 168 ELFDEMPEKGCKP------NEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYN 221
Query: 158 NLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLS 217
++ + G+ D K++ M G VPD++T N I LCK G + A + DM L
Sbjct: 222 TIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELD 281
Query: 218 GC----SPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCG 273
P++ITYN +++G G +A + ++ L +Y + ++ + R+
Sbjct: 282 EYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGK 341
Query: 274 AIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNT 333
I A VL+ M +G P I +YN L+ K G+ + ++ + G+ P+AVTY
Sbjct: 342 FIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGC 401
Query: 334 LIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSES 393
L+H S G D +L+ M + P T NI+L+ L K G + A L M +
Sbjct: 402 LLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKG 461
Query: 394 CFPDIVTYNTLLSGLCKEGFVDEGIQLL-----------------YL------LTGTNCS 430
D VT N ++ GLC G +D+ I+++ Y+ L NC
Sbjct: 462 YGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCL 521
Query: 431 PGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMEL 490
P L+TY+ ++GL + G AK L++EM+G+ + PD + ++ FC ++ A +
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 491 LKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVAD 550
LK+M KK Y +ILGL + ++ +D M P+ Y+ I+ + +
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCE 641
Query: 551 SGMVKEANDLHQRLIEWKI 569
V++A +L +++ I
Sbjct: 642 GEKVEDATNLLDEMMQKNI 660
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 121/452 (26%), Positives = 207/452 (45%), Gaps = 13/452 (2%)
Query: 115 RNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCK 174
R + T N +L+ C G L A L E + + S ++GL++ G+ +
Sbjct: 288 RPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAET 347
Query: 175 IINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMF 234
++ M G P + + N+++ GLCK G L A +V M +G PDA+TY ++ G
Sbjct: 348 VLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYC 407
Query: 235 DKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDII 294
G + A S ++ +R C P T +L+ + + A E+L M +G D +
Sbjct: 408 SVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTV 467
Query: 295 TYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIM 354
T N +V G ++ ++ + G +A N + Y VDD L
Sbjct: 468 TCNIIVDGLCGSGELDKAIEIVKGMRVHG---SAALGNL------GNSYIGLVDDSL--- 515
Query: 355 NETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFV 414
E + P +TY+ +LNGLCK+G A +L++ M+ E PD V YN + CK+G +
Sbjct: 516 IENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKI 575
Query: 415 DEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSL 474
++L + C L TYN I GL + L EM KGI P+ T+++
Sbjct: 576 SSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTA 635
Query: 475 AWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRC 534
C +++E+A LL EM +K+ +++ +I CK D+A + + V S C
Sbjct: 636 IQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAV-SIC 694
Query: 535 KPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
E +Y + + +G + +A +L + +++
Sbjct: 695 GQKEGLYSLMFNELLAAGQLLKATELLEAVLD 726
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 204/452 (45%), Gaps = 16/452 (3%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N +L++ R+ + L + M P + LIR L +D ++ + M
Sbjct: 116 NLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPE 175
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
G P+ T +++ G CK G ++L+ M G P+ + YNTI+ +G ++
Sbjct: 176 KGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDD 235
Query: 242 AVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCY----PDIITYN 297
+ + +G P ++T+ I +C+ + A + DM ++ P+ ITYN
Sbjct: 236 SEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYN 295
Query: 298 SLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNET 357
++ K G+ E+ + ++ + +YN + L HG + + VL+ M +
Sbjct: 296 LMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDK 355
Query: 358 SSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEG 417
P+ +YNI+++GLCK G+L A ++ M PD VTY LL G C G VD
Sbjct: 356 GIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAA 415
Query: 418 IQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWG 477
LL + NC P T NI + L +MG + A+EL +M KG D +T + + G
Sbjct: 416 KSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDG 475
Query: 478 FCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPD 537
CG +L++A+E++K M H + LG VD D ++ + C PD
Sbjct: 476 LCGSGELDKAIEIVKGMR------VHGSAALGNLGNSYIGLVD------DSLIENNCLPD 523
Query: 538 EKIYDALIKAVADSGMVKEANDLHQRLIEWKI 569
Y L+ + +G EA +L ++ K+
Sbjct: 524 LITYSTLLNGLCKAGRFAEAKNLFAEMMGEKL 555
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 165/350 (47%), Gaps = 4/350 (1%)
Query: 221 PDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEV 280
P YN ++ + +KD + G P T+ +LI +C A E+
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 281 LEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSS 340
++M +GC P+ T+ LV K G+ ++ +++ + S G+ PN V YNT++ S
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 341 HGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCF----P 396
G D + ++E M E P VT+N ++ LCK G + A ++S M + P
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289
Query: 397 DIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELY 456
+ +TYN +L G CK G +++ L + + L +YNI + GL R G A+ +
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349
Query: 457 SEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQ 516
+M KGI P +++ L G C + L +A ++ M + Y C++ G C
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSV 409
Query: 517 RKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
KVD A L M+R+ C P+ + L+ ++ G + EA +L +++ E
Sbjct: 410 GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNE 459
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 205/435 (47%)
Query: 132 GRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITC 191
G L A+ + + M + P+ + T LI+GL + G+I + + ++ G P ++T
Sbjct: 370 GDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTY 429
Query: 192 NMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLR 251
+ +I G CK G L+S L EDM G PD + Y ++ G+ +G A+ F L
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLG 489
Query: 252 KGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEE 311
+ ++ + LI+ CR AL+V M + G PD+ T+ +++ + +G EE
Sbjct: 490 QSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEE 549
Query: 312 TYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLN 371
+ + G++P+A+ Y TLI + H + ++M N++++
Sbjct: 550 ALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIH 609
Query: 372 GLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSP 431
L K ++ A ++ ++ PDIVTYNT++ G C +DE ++ LL T P
Sbjct: 610 LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP 669
Query: 432 GLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELL 491
VT I I L + M+ A ++S M KG P+ +T+ L F +E + +L
Sbjct: 670 NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLF 729
Query: 492 KEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADS 551
+EM +K +Y +I GLCK+ +VD A + ++ PD Y LI+
Sbjct: 730 EEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKV 789
Query: 552 GMVKEANDLHQRLIE 566
G + EA L++ ++
Sbjct: 790 GRLVEAALLYEHMLR 804
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/454 (24%), Positives = 206/454 (45%), Gaps = 5/454 (1%)
Query: 111 PPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQID 170
P V GF +L L +G + A ++ + SC +++GL + QI+
Sbjct: 214 PSGVSAHGF----VLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIE 268
Query: 171 KGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTII 230
+++++++ G P+V+T +I G CKRG + A DL + M G PD I Y+T+I
Sbjct: 269 VASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLI 328
Query: 231 RGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCY 290
G F G + L KG ++ ++ I++ + A V + M +G
Sbjct: 329 DGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS 388
Query: 291 PDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDV 350
P+++TY L+ + G E + + +L RGM+P+ VTY++LI G +
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448
Query: 351 LEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCK 410
E M + PP V Y ++++GL K GL+ A+ M+ +S ++V +N+L+ G C+
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Query: 411 EGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEIT 470
DE +++ L+ P + T+ + G +E A L+ M G+ PD +
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALA 568
Query: 471 HSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMV 530
+ +L FC + ++L M + VI L K +++ A + + ++
Sbjct: 569 YCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI 628
Query: 531 RSRCKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
+ +PD Y+ +I + EA + + L
Sbjct: 629 EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELL 662
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 184/416 (44%), Gaps = 35/416 (8%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T +++ LC GR+ A + + ++ P + ++LI G K G + G + M
Sbjct: 393 TYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYL----------------------------------- 204
+ G PDV+ +++ GL K+G +
Sbjct: 453 IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRF 512
Query: 205 KSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVL 264
A+ + M + G PD T+ T++R +G EA+ + + G P + Y L
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTL 572
Query: 265 IELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGM 324
I+ C++ L++ + M DI N ++ K E+ +NL+ M
Sbjct: 573 IDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKM 632
Query: 325 QPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAIS 384
+P+ VTYNT+I S D + + E++ T P VT I+++ LCK+ +D AI
Sbjct: 633 EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIR 692
Query: 385 LYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLA 444
++S M + P+ VTY L+ K ++ +L + SP +V+Y+I IDGL
Sbjct: 693 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLC 752
Query: 445 RMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEK 500
+ G ++ A ++ + I ++PD + ++ L G+C V +L EA L + M + K
Sbjct: 753 KRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 808
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/414 (21%), Positives = 181/414 (43%), Gaps = 6/414 (1%)
Query: 156 CTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMS 215
C L+ + G +DK +I G V + ++ L + D + +
Sbjct: 149 CKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLC 208
Query: 216 LSGCSPDAIT-YNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIE--LVCRYC 272
G P ++ + ++ +F KG +A+ F + + +G +++ +++ V +
Sbjct: 209 RGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIE 268
Query: 273 GAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYN 332
A R L ++ D G P+++T+ +L++ K+G + + + + RG++P+ + Y+
Sbjct: 269 VASRLLSLVLDC---GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325
Query: 333 TLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSE 392
TLI G + V ++ ++ KSG L A +Y M+ +
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385
Query: 393 SCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESA 452
P++VTY L+ GLC++G + E + + P +VTY+ IDG + G++ S
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 453 KELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILG 512
LY +MI G PD + + L G + AM +M + ++ + +I G
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Query: 513 LCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
C+ + D A++ LM KPD + +++ G ++EA L R+ +
Sbjct: 506 WCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFK 559
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 127/286 (44%), Gaps = 4/286 (1%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
++ D T +++ GRL A L M + P + LI K + G
Sbjct: 527 IKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGL 586
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
++ ++M + D+ CN+VI L K ++ A ++ PD +TYNT+I G
Sbjct: 587 QLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGY 646
Query: 234 FDKGNFNEAVSFWKDQLRKGCP--PYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYP 291
+EA + +L K P P +T T+LI ++C+ A+ + MA +G P
Sbjct: 647 CSLRRLDEAERIF--ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKP 704
Query: 292 DIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVL 351
+ +TY L+ + +K E ++ + + +G+ P+ V+Y+ +I L G D ++
Sbjct: 705 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 764
Query: 352 EIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPD 397
+ P V Y I++ G CK G L A LY M+ PD
Sbjct: 765 HQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 85/186 (45%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T N ++ C+ RL A R+ E++ P+ + T LI L K +D ++
Sbjct: 635 DIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF 694
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
+IM G P+ +T ++ K ++ + L E+M G SP ++Y+ II G+ +
Sbjct: 695 SIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKR 754
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
G +EA + + + P ++ Y +LI C+ + A + E M G PD +
Sbjct: 755 GRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQ 814
Query: 297 NSLVSF 302
+L +
Sbjct: 815 RALSEY 820
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/228 (19%), Positives = 99/228 (43%), Gaps = 5/228 (2%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N ++ L R+ A++ + P + +I G + ++D+ +I ++ +
Sbjct: 605 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV 664
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
+ P+ +T ++I LCK + A+ + M+ G P+A+TY ++ +
Sbjct: 665 TPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEG 724
Query: 242 AVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVS 301
+ +++ KG P +++Y+++I+ +C+ A + PD++ Y L+
Sbjct: 725 SFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIR 784
Query: 302 FTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHS-----LSSHGYW 344
K G E L+ ++L G++P+ + L L S G W
Sbjct: 785 GYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYNPPKWLMSKGVW 832
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 129/497 (25%), Positives = 225/497 (45%), Gaps = 39/497 (7%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
VR + N ++ C G+L+ A ++ M S P + L+ G + G +D+
Sbjct: 362 VRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEAL 421
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
K+ + M VP V+T N+++ G + G + L + M G + D I+ +T++ +
Sbjct: 422 KLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEAL 481
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
F G+FNEA+ W++ L +G IT V+I +C+ A E+L+++ + C P +
Sbjct: 482 FKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAV 541
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
TY +L K G +E + V + +G+ P YNTLI + + + V D++
Sbjct: 542 QTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIE 601
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
+ PT TY ++ G C G++D+A + M+ + ++ + + + L +
Sbjct: 602 LRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDK 661
Query: 414 VDEGIQLL-------YLLTG------------TNC-------------------SPGLVT 435
+DE LL LL G T C P +
Sbjct: 662 IDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIV 721
Query: 436 YNIAIDGLARMGSMESAKELYSEMIGKG-IVPDEITHSSLAWGFCGVDQLEEAMELLKEM 494
YN+AI GL + G +E A++L+S+++ +PDE T++ L G + +A L EM
Sbjct: 722 YNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEM 781
Query: 495 HKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMV 554
K Y +I GLCK VD A + L + + P+ Y+ LI + SG V
Sbjct: 782 ALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNV 841
Query: 555 KEANDLHQRLIEWKILK 571
EA L +++IE +++
Sbjct: 842 AEAMRLKEKMIEKGLVR 858
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 125/460 (27%), Positives = 199/460 (43%), Gaps = 42/460 (9%)
Query: 99 GELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTN 158
GELV K P V + IL+ +G + A + + M +IP SC +
Sbjct: 142 GELVRVFKEFSFSPTVFD------MILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNS 195
Query: 159 LIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLS- 217
L+ L++ G+ + + M+ PDV TC++V+ C+ G + A+ ++ S
Sbjct: 196 LLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSL 255
Query: 218 GCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRA 277
G + +TYN++I G G+ G R
Sbjct: 256 GLELNVVTYNSLINGYAMIGDVE--------------------------------GMTRV 283
Query: 278 LEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHS 337
L + M+ G +++TY SL+ K+G+ EE V L + + + Y L+
Sbjct: 284 LRL---MSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDG 340
Query: 338 LSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPD 397
G V + M E N ++NG CKSG L A ++S M S PD
Sbjct: 341 YCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPD 400
Query: 398 IVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYS 457
TYNTL+ G C+ G+VDE ++L + P ++TYNI + G +R+G+ L+
Sbjct: 401 HHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWK 460
Query: 458 EMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQR 517
M+ +G+ DEI+ S+L + EAM+L + + + +I GLCK
Sbjct: 461 MMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKME 520
Query: 518 KVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
KV+ A + LD + RCKP + Y AL G +KEA
Sbjct: 521 KVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEA 560
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 205/484 (42%), Gaps = 39/484 (8%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T +++ C +G + A + E++ K + L+ G + GQI ++ + M
Sbjct: 298 TYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNM 357
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
+ G + CN +I G CK G L A + M+ PD TYNT++ G G
Sbjct: 358 IEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYV 417
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
+EA+ +K P ++TY +L++ R L + + M G D I+ ++L
Sbjct: 418 DEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTL 477
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS 359
+ K G + E + N+L+RG+ + +T N +I L + ++L+ +N
Sbjct: 478 LEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRC 537
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQ 419
P TY + +G K G L A ++ M + FP I YNTL+SG K +++
Sbjct: 538 KPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVAD 597
Query: 420 LLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFC 479
L+ L +P + TY I G +G ++ A EMI KGI + S +A
Sbjct: 598 LVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLF 657
Query: 480 GVDQLEEAMELLKEMHK-----------------------KDEKIKHT------------ 504
+D+++EA LL+++ K +KI +
Sbjct: 658 RLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVP 717
Query: 505 ---AYRCVILGLCKQRKVDIAIQAL-DLMVRSRCKPDEKIYDALIKAVADSGMVKEANDL 560
Y I GLCK K++ A + DL+ R PDE Y LI A +G + +A L
Sbjct: 718 NNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTL 777
Query: 561 HQRL 564
+
Sbjct: 778 RDEM 781
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 192/432 (44%), Gaps = 9/432 (2%)
Query: 131 RGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVP-DVI 189
+G A + + M P +C+ ++ + G +DK S G+ +V+
Sbjct: 203 KGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVV 262
Query: 190 TCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQ 249
T N +I G G ++ ++ MS G S + +TY ++I+G KG EA ++
Sbjct: 263 TYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELL 322
Query: 250 LRKGCPPYLITYTVLIELVCRYCGAIR-ALEVLEDMAMEGCYPDIITYNSLVSFTAKQGV 308
K Y VL++ CR G IR A+ V ++M G + NSL++ K G
Sbjct: 323 KEKKLVADQHMYGVLMDGYCR-TGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQ 381
Query: 309 YEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNI 368
E + S + ++P+ TYNTL+ GY D + + M + PT +TYNI
Sbjct: 382 LVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNI 441
Query: 369 MLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTN 428
+L G + G +SL+ M+ D ++ +TLL L K G +E ++L +
Sbjct: 442 LLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARG 501
Query: 429 CSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAM 488
+T N+ I GL +M + AKE+ + P T+ +L+ G+ V L+EA
Sbjct: 502 LLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAF 561
Query: 489 ELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCK---PDEKIYDALI 545
+ + M +K Y +I G K R ++ + DL++ R + P Y ALI
Sbjct: 562 AVKEYMERKGIFPTIEMYNTLISGAFKYRHLN---KVADLVIELRARGLTPTVATYGALI 618
Query: 546 KAVADSGMVKEA 557
+ GM+ +A
Sbjct: 619 TGWCNIGMIDKA 630
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/413 (22%), Positives = 177/413 (42%)
Query: 158 NLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLS 217
+LI G IG ++ +++ +M G +V+T +I G CK+G ++ A + E +
Sbjct: 266 SLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEK 325
Query: 218 GCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRA 277
D Y ++ G G +AV + + G LI C+ + A
Sbjct: 326 KLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEA 385
Query: 278 LEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHS 337
++ M PD TYN+LV + G +E + + + + P +TYN L+
Sbjct: 386 EQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKG 445
Query: 338 LSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPD 397
S G + V + ++M + ++ + +L L K G + A+ L+ +++ D
Sbjct: 446 YSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTD 505
Query: 398 IVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYS 457
+T N ++SGLCK V+E ++L + C P + TY G ++G+++ A +
Sbjct: 506 TITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKE 565
Query: 458 EMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQR 517
M KGI P +++L G L + +L+ E+ + Y +I G C
Sbjct: 566 YMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIG 625
Query: 518 KVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKIL 570
+D A M+ + I + ++ + EA L Q+++++ +L
Sbjct: 626 MIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLL 678
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 158/351 (45%), Gaps = 1/351 (0%)
Query: 225 TYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDM 284
++ I++ +KG A+ + + G P L++ L+ + R AL V + M
Sbjct: 157 VFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQM 216
Query: 285 AMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSR-GMQPNAVTYNTLIHSLSSHGY 343
PD+ T + +V+ + G ++ + S G++ N VTYN+LI+ + G
Sbjct: 217 ISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGD 276
Query: 344 WDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNT 403
+G+ VL +M+E VTY ++ G CK GL++ A ++ + + D Y
Sbjct: 277 VEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGV 336
Query: 404 LLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKG 463
L+ G C+ G + + +++ + N I+G + G + A++++S M
Sbjct: 337 LMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWS 396
Query: 464 IVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAI 523
+ PD T+++L G+C ++EA++L +M +K+ Y ++ G + +
Sbjct: 397 LKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVL 456
Query: 524 QALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKILKTEI 574
+M++ DE L++A+ G EA L + ++ +L I
Sbjct: 457 SLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTI 507
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/447 (25%), Positives = 209/447 (46%), Gaps = 9/447 (2%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQI---PHFPSCTNLIRGLIKIGQIDKGC 173
D + N ++ C G + +A+ ++E + P S +L G K+ +D+
Sbjct: 90 DVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF 149
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
+ +M+ P+V+T + I CK G L+ A+ M SP+ +T+ +I G
Sbjct: 150 VYMGVMLKCCS-PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGY 208
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
G+ AVS +K+ R ++TYT LI+ C+ RA E+ M + P+
Sbjct: 209 CKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNS 268
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
+ Y +++ ++G + ++ +L++GM+ + Y +I L +G +++E
Sbjct: 269 LVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVED 328
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
M ++ P V + M+N KSG + A+++Y ++ PD+V +T++ G+ K G
Sbjct: 329 MEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQ 388
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSS 473
+ E I + + V Y + ID L + G + L+S++ G+VPD+ ++S
Sbjct: 389 LHEAIVYFCIEKAND-----VMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTS 443
Query: 474 LAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSR 533
G C L +A +L M ++ + AY +I GL + + A Q D M+ S
Sbjct: 444 WIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSG 503
Query: 534 CKPDEKIYDALIKAVADSGMVKEANDL 560
PD ++D LI+A G + A+DL
Sbjct: 504 ISPDSAVFDLLIRAYEKEGNMAAASDL 530
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 209/457 (45%), Gaps = 9/457 (1%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D FT NK + L + + + + + + PH S +++ + K+GQ+ I+
Sbjct: 20 DPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIV 79
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSG---CSPDAITYNTIIRGM 233
+ M G PDVI+ N +I G C+ G ++SA ++E + S C PD +++N++ G
Sbjct: 80 HSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNG- 138
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
F K + V + + K C P ++TY+ I+ C+ AL+ M + P++
Sbjct: 139 FSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNV 198
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
+T+ L+ K G E + + M N VTY LI G +++
Sbjct: 199 VTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSR 258
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
M E P + Y +++G + G D A+ + M+++ DI Y ++SGLC G
Sbjct: 259 MVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGK 318
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSS 473
+ E +++ + ++ P +V + ++ + G M++A +Y ++I +G PD + S+
Sbjct: 319 LKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALST 378
Query: 474 LAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSR 533
+ G QL EA+ ++ EK Y +I LCK+ + + +
Sbjct: 379 MIDGIAKNGQLHEAI-----VYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAG 433
Query: 534 CKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKIL 570
PD+ +Y + I + G + +A L R+++ +L
Sbjct: 434 LVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLL 470
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 185/366 (50%), Gaps = 4/366 (1%)
Query: 204 LKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTV 263
++ A+ + + S PD T N I + + ++ F + +G P+ ++
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61
Query: 264 LIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNL-LSR 322
++ VC+ A +++ M GC PD+I+YNSL+ + G LV+ +L S
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121
Query: 323 GM--QPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLD 380
G +P+ V++N+L + S D V + +M + SP VTY+ ++ CKSG L
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNV-VTYSTWIDTFCKSGELQ 180
Query: 381 RAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAI 440
A+ + +M ++ P++VT+ L+ G CK G ++ + L + S +VTY I
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI 240
Query: 441 DGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEK 500
DG + G M+ A+E+YS M+ + P+ + ++++ GF + AM+ L +M + +
Sbjct: 241 DGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMR 300
Query: 501 IKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDL 560
+ TAY +I GLC K+ A + ++ M +S PD I+ ++ A SG +K A ++
Sbjct: 301 LDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNM 360
Query: 561 HQRLIE 566
+ +LIE
Sbjct: 361 YHKLIE 366
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 187/421 (44%), Gaps = 33/421 (7%)
Query: 137 AARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIG 196
A + + + + S +P +C I LI K + +V G P + N V+
Sbjct: 5 ALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVS 64
Query: 197 GLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPP 256
+CK G +K A D+V M GC PD I+YN++I G G+ A
Sbjct: 65 FVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSA-------------- 110
Query: 257 YLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVI 316
++++E + G I C PDI+++NSL + +K + +E ++ +
Sbjct: 111 -----SLVLESLRASHGFI-------------CKPDIVSFNSLFNGFSKMKMLDEVFVYM 152
Query: 317 SNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKS 376
+L + PN VTY+T I + G M + P VT+ +++G CK+
Sbjct: 153 GVML-KCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKA 211
Query: 377 GLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTY 436
G L+ A+SLY M ++VTY L+ G CK+G + ++ + P + Y
Sbjct: 212 GDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVY 271
Query: 437 NIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHK 496
IDG + G ++A + ++M+ +G+ D + + G CG +L+EA E++++M K
Sbjct: 272 TTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEK 331
Query: 497 KDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKE 556
D + ++ K ++ A+ ++ +PD +I +A +G + E
Sbjct: 332 SDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHE 391
Query: 557 A 557
A
Sbjct: 392 A 392
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 169/378 (44%), Gaps = 5/378 (1%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T + + C G L A + M R + P+ + T LI G K G ++ + M
Sbjct: 165 TYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEM 224
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
+V+T +I G CK+G ++ A ++ M P+++ Y TII G F +G+
Sbjct: 225 RRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDS 284
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
+ A+ F L +G + Y V+I +C A E++EDM PD++ + ++
Sbjct: 285 DNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTM 344
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS 359
++ K G + + L+ RG +P+ V +T+I ++ +G I+
Sbjct: 345 MNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA-----IVYFCIE 399
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQ 419
V Y ++++ LCK G L+S + PD Y + ++GLCK+G + + +
Sbjct: 400 KANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFK 459
Query: 420 LLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFC 479
L + L+ Y I GLA G M A++++ EM+ GI PD L +
Sbjct: 460 LKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYE 519
Query: 480 GVDQLEEAMELLKEMHKK 497
+ A +LL +M ++
Sbjct: 520 KEGNMAAASDLLLDMQRR 537
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 121/262 (46%), Gaps = 4/262 (1%)
Query: 311 ETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIML 370
E +S L P+ T N IH L + L + P R ++N ++
Sbjct: 4 EALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVV 63
Query: 371 NGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTN-- 428
+ +CK G + A + +M C PD+++YN+L+ G C+ G + +L L ++
Sbjct: 64 SFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGF 123
Query: 429 -CSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEA 487
C P +V++N +G ++M ++ +Y ++ K P+ +T+S+ FC +L+ A
Sbjct: 124 ICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLA 182
Query: 488 MELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKA 547
++ M + + C+I G CK +++A+ M R R + Y ALI
Sbjct: 183 LKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDG 242
Query: 548 VADSGMVKEANDLHQRLIEWKI 569
G ++ A +++ R++E ++
Sbjct: 243 FCKKGEMQRAEEMYSRMVEDRV 264
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/467 (25%), Positives = 219/467 (46%), Gaps = 18/467 (3%)
Query: 93 FERRESGELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPH 152
+ RE+ ++ D K +K + T + ++ LC + +L A + K P
Sbjct: 167 YHFRETDKMWDVYKEIKD-----KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPS 221
Query: 153 FPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVE 212
S +++ G K+G +D ++ G VP V + N++I GLC G + A++L
Sbjct: 222 VVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELAS 281
Query: 213 DMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYC 272
DM+ G PD++TYN + +G G + A +D L KG P +ITYT+L+ C+
Sbjct: 282 DMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLG 341
Query: 273 GAIRALEVLEDMAMEGC-YPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTY 331
L +L+DM G II + ++S K G +E + + + + G+ P+ V Y
Sbjct: 342 NIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAY 401
Query: 332 NTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVS 391
+ +IH L G +D + + M + P T+ +L GLC+ G+L A SL +++S
Sbjct: 402 SIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLIS 461
Query: 392 ESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMES 451
DIV YN ++ G K G ++E ++L ++ T +P + T+N I G + ++
Sbjct: 462 SGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAE 521
Query: 452 AKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVIL 511
A+++ + G+ P +++++L + + EL +EM + + Y +
Sbjct: 522 ARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFK 581
Query: 512 GLCKQRKVDIAIQALDLMVRSRCK------------PDEKIYDALIK 546
GLC+ K + L + +CK PD+ Y+ +I+
Sbjct: 582 GLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQ 628
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 183/376 (48%), Gaps = 1/376 (0%)
Query: 190 TCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQ 249
T + V+ GLC++ L+ AV + P +++N+I+ G G + A SF+
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 250 LRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVY 309
L+ G P + ++ +LI +C ALE+ DM G PD +TYN L G+
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 310 EETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWD-GVDDVLEIMNETSSPPTRVTYNI 368
+ VI ++L +G+ P+ +TY L+ G D G+ + ++++ + + ++
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368
Query: 369 MLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTN 428
ML+GLCK+G +D A+SL++ M ++ PD+V Y+ ++ GLCK G D + L +
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 429 CSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAM 488
P T+ + GL + G + A+ L +I G D + ++ + G+ +EEA+
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 488
Query: 489 ELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAV 548
EL K + + + +I G CK + + A + LD++ P Y L+ A
Sbjct: 489 ELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAY 548
Query: 549 ADSGMVKEANDLHQRL 564
A+ G K ++L + +
Sbjct: 549 ANCGNTKSIDELRREM 564
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 185/414 (44%), Gaps = 13/414 (3%)
Query: 117 DGFTNNKILQNLCTRGRL-MAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKI 175
D T +L C G + M L ++++R ++ C+ ++ GL K G+ID+ +
Sbjct: 326 DVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSL 385
Query: 176 INIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFD 235
N M G PD++ ++VI GLCK G A+ L ++M P++ T+ ++ G+
Sbjct: 386 FNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQ 445
Query: 236 KGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIIT 295
KG EA S + G ++ Y ++I+ + ALE+ + + G P + T
Sbjct: 446 KGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVAT 505
Query: 296 YNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMN 355
+NSL+ K E ++ + G+ P+ V+Y TL+ + ++ G +D++ M
Sbjct: 506 FNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMK 565
Query: 356 ETSSPPTRVTYNIMLNGLCKSG------------LLDRAISLYSTMVSESCFPDIVTYNT 403
PPT VTY+++ GLC+ + ++ M SE PD +TYNT
Sbjct: 566 AEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNT 625
Query: 404 LLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKG 463
++ LC+ + L ++ N TYNI ID L G + A + +
Sbjct: 626 IIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQN 685
Query: 464 IVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQR 517
+ + +++L C E A++L ++ + + Y VI LC++
Sbjct: 686 VSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRH 739
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 155/343 (45%), Gaps = 36/343 (10%)
Query: 225 TYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDM 284
TY+T++ G+ + +AV F + K P ++++ ++ C+ A +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 285 AMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYW 344
G P + ++N L++ G E + S++ G++P++VTYN L G
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 345 DGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESC-FPDIVTYNT 403
G +V+ M + P +TY I+L G C+ G +D + L M+S I+ +
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368
Query: 404 LLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKG 463
+LSGLCK G +DE + L + SP LV Y+I I GL ++G + A LY EM K
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 464 IVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAI 523
I+P+ TH +L +LGLC++ + A
Sbjct: 429 ILPNSRTHGAL-----------------------------------LLGLCQKGMLLEAR 453
Query: 524 QALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
LD ++ S D +Y+ +I A SG ++EA +L + +IE
Sbjct: 454 SLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIE 496
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 143/313 (45%), Gaps = 8/313 (2%)
Query: 259 ITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISN 318
+ + +L+ L R +L +L+ M + +YNS++ + + Y I +
Sbjct: 125 LVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKD 184
Query: 319 LLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGL 378
N TY+T++ L + L P+ V++N +++G CK G
Sbjct: 185 -------KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGF 237
Query: 379 LDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNI 438
+D A S + T++ P + ++N L++GLC G + E ++L + P VTYNI
Sbjct: 238 VDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNI 297
Query: 439 AIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKD 498
G +G + A E+ +M+ KG+ PD IT++ L G C + ++ + LLK+M +
Sbjct: 298 LAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRG 357
Query: 499 EKIKHTAYRCVIL-GLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
++ V+L GLCK ++D A+ + M PD Y +I + G A
Sbjct: 358 FELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 417
Query: 558 NDLHQRLIEWKIL 570
L+ + + +IL
Sbjct: 418 LWLYDEMCDKRIL 430
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 208/453 (45%), Gaps = 8/453 (1%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T ++ LCT +L A + E M P + L+ +D +
Sbjct: 292 DVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFW 351
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
+ M G VPDV+T +++ LCK G A D ++ M G P+ TYNT+I G+
Sbjct: 352 SEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRV 411
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
++A+ + + G P TY V I+ + ++ ALE E M +G P+I+
Sbjct: 412 HRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVAC 471
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
N+ + AK G E + L G+ P++VTYN ++ S G D +L M E
Sbjct: 472 NASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMME 531
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDE 416
P + N ++N L K+ +D A ++ M P +VTYNTLL+GL K G + E
Sbjct: 532 NGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQE 591
Query: 417 GIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAW 476
I+L + C P +T+N D L + + A ++ +M+ G VPD T++++ +
Sbjct: 592 AIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIF 651
Query: 477 GFCGVDQLEEAMELLKEMHKKDEKIKHTAY--RCVIL-GLCKQRKVDIAIQAL-DLMVRS 532
G Q++EAM +M +K+ + + C +L G+ K ++ A + + + +
Sbjct: 652 GLVKNGQVKEAMCFFHQM----KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNC 707
Query: 533 RCKPDEKIYDALIKAVADSGMVKEANDLHQRLI 565
+P ++ LI ++ + A +RL+
Sbjct: 708 ADQPANLFWEDLIGSILAEAGIDNAVSFSERLV 740
Score = 168 bits (426), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 199/424 (46%), Gaps = 3/424 (0%)
Query: 134 LMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNM 193
+M + +E + K + F C IR L + G+I++ +I+ M G PDV+T +
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTIC---IRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTV 298
Query: 194 VIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKG 253
+I LC L A ++ E M PD +TY T++ D + + FW + + G
Sbjct: 299 LIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDG 358
Query: 254 CPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETY 313
P ++T+T+L++ +C+ A + L+ M +G P++ TYN+L+ + ++
Sbjct: 359 HVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDAL 418
Query: 314 LVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGL 373
+ N+ S G++P A TY I G + E M P V N L L
Sbjct: 419 ELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSL 478
Query: 374 CKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGL 433
K+G A ++ + PD VTYN ++ K G +DE I+LL + C P +
Sbjct: 479 AKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDV 538
Query: 434 VTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKE 493
+ N I+ L + ++ A +++ M + P +T+++L G +++EA+EL +
Sbjct: 539 IVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEG 598
Query: 494 MHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGM 553
M +K + + LCK +V +A++ L M+ C PD Y+ +I + +G
Sbjct: 599 MVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQ 658
Query: 554 VKEA 557
VKEA
Sbjct: 659 VKEA 662
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 127/518 (24%), Positives = 215/518 (41%), Gaps = 73/518 (14%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N L +L GR A ++ + +P + +++ K+G+ID+ K+++ M+
Sbjct: 472 NASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMME 531
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
+G PDVI N +I L K + A + M P +TYNT++ G+ G E
Sbjct: 532 NGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQE 591
Query: 242 AVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYN---- 297
A+ ++ ++KGCPP IT+ L + +C+ AL++L M GC PD+ TYN
Sbjct: 592 AIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIF 651
Query: 298 ------------------------------SLVSFTAKQGVYEETYLVISNLLSR-GMQP 326
+L+ K + E+ Y +I+N L QP
Sbjct: 652 GLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQP 711
Query: 327 NAVTYNTLIHSLSSHGYWDGV----------------DDVL------------------- 351
+ + LI S+ + D D +L
Sbjct: 712 ANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTL 771
Query: 352 --EIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLC 409
+ + P TYN+++ GL ++ +++ A ++ + S C PD+ TYN LL
Sbjct: 772 FEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYG 831
Query: 410 KEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIG-KGIVPDE 468
K G +DE +L ++ C +T+NI I GL + G+++ A +LY +++ + P
Sbjct: 832 KSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTA 891
Query: 469 ITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDL 528
T+ L G +L EA +L + M + Y +I G K + D A
Sbjct: 892 CTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKR 951
Query: 529 MVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
MV+ +PD K Y L+ + G V E + L E
Sbjct: 952 MVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKE 989
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 142/533 (26%), Positives = 235/533 (44%), Gaps = 58/533 (10%)
Query: 74 SAVIDRVNEVDHEDWGLESFERRESGELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGR 133
+++I+ + + D D + F R K +K P V T N +L L G+
Sbjct: 542 NSLINTLYKADRVDEAWKMFMRM---------KEMKLKPTV----VTYNTLLAGLGKNGK 588
Query: 134 LMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNM 193
+ A L E M +K P+ + L L K ++ K++ M+ G VPDV T N
Sbjct: 589 IQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNT 648
Query: 194 VIGGLCKRGYLKSAV---------------------------DLVEDMS------LSGCS 220
+I GL K G +K A+ L+ED L C+
Sbjct: 649 IIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCA 708
Query: 221 --PDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKG-CPPYLITYTVLIELVCRYCGAIRA 277
P + + +I + + + AVSF + + G C +I C++ A
Sbjct: 709 DQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGA 768
Query: 278 LEVLEDMAME-GCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIH 336
+ E + G P + TYN L+ + + E V + S G P+ TYN L
Sbjct: 769 RTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFL-- 826
Query: 337 SLSSHGYWDGVDDVLEIMNETSS---PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSES 393
L ++G +D++ E+ E S+ +T+NI+++GL K+G +D A+ LY ++S+
Sbjct: 827 -LDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDR 885
Query: 394 CF-PDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESA 452
F P TY L+ GL K G + E QL + C P YNI I+G + G ++A
Sbjct: 886 DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAA 945
Query: 453 KELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILG 512
L+ M+ +G+ PD T+S L C V +++E + KE+ + Y +I G
Sbjct: 946 CALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIING 1005
Query: 513 LCKQRKVDIAIQALDLMVRSR-CKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
L K +++ A+ + M SR PD Y++LI + +GMV+EA ++ +
Sbjct: 1006 LGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEI 1058
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 208/453 (45%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
++ D T I ++L +G L A + M + + S LI L+K +
Sbjct: 149 IKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAM 208
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
++ M++ G P + T + ++ GL KR + S + L+++M G P+ T+ IR +
Sbjct: 209 EVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVL 268
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
G NEA K +GC P ++TYTVLI+ +C A EV E M PD
Sbjct: 269 GRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDR 328
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
+TY +L+ + + S + G P+ VT+ L+ +L G + D L++
Sbjct: 329 VTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDV 388
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
M + P TYN ++ GL + LD A+ L+ M S P TY + K G
Sbjct: 389 MRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGD 448
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSS 473
++ + +P +V N ++ LA+ G AK+++ + G+VPD +T++
Sbjct: 449 SVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNM 508
Query: 474 LAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSR 533
+ + V +++EA++LL EM + + +I L K +VD A + M +
Sbjct: 509 MMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK 568
Query: 534 CKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
KP Y+ L+ + +G ++EA +L + +++
Sbjct: 569 LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQ 601
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 123/468 (26%), Positives = 199/468 (42%), Gaps = 41/468 (8%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D FT N I+ L G++ A M +K P F + L+ G++K I+ KII
Sbjct: 642 DVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKII 700
Query: 177 N--------------------IMVMSGGVPDVITCN--MVIGGLCKRG------------ 202
++ G+ + ++ + +V G+C+ G
Sbjct: 701 TNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSC 760
Query: 203 ---YLKSAVDLVEDMSLS-GCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYL 258
+ A L E + G P TYN +I G+ + A + GC P +
Sbjct: 761 KHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDV 820
Query: 259 ITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISN 318
TY L++ + E+ ++M+ C + IT+N ++S K G ++ + +
Sbjct: 821 ATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYD 880
Query: 319 LLS-RGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSG 377
L+S R P A TY LI LS G + E M + P YNI++NG K+G
Sbjct: 881 LMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAG 940
Query: 378 LLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYN 437
D A +L+ MV E PD+ TY+ L+ LC G VDEG+ L + +P +V YN
Sbjct: 941 EADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYN 1000
Query: 438 IAIDGLARMGSMESAKELYSEM-IGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHK 496
+ I+GL + +E A L++EM +GI PD T++SL +EEA ++ E+ +
Sbjct: 1001 LIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQR 1060
Query: 497 KDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDAL 544
+ + +I G K + A MV P+ Y+ L
Sbjct: 1061 AGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 112/265 (42%)
Query: 295 TYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIM 354
T N ++ G EE V + R ++ + TY T+ SLS G L M
Sbjct: 120 TCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKM 179
Query: 355 NETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFV 414
E +YN +++ L KS A+ +Y M+ E P + TY++L+ GL K +
Sbjct: 180 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDI 239
Query: 415 DEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSL 474
D + LL + P + T+ I I L R G + A E+ M +G PD +T++ L
Sbjct: 240 DSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 299
Query: 475 AWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRC 534
C +L+ A E+ ++M K Y ++ R +D Q M +
Sbjct: 300 IDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGH 359
Query: 535 KPDEKIYDALIKAVADSGMVKEAND 559
PD + L+ A+ +G EA D
Sbjct: 360 VPDVVTFTILVDALCKAGNFGEAFD 384
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 100/250 (40%), Gaps = 37/250 (14%)
Query: 159 LIRGLIKIGQIDKGCKII-NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLS 217
+I GL+K G +D + ++M P T +I GL K G L A L E M
Sbjct: 861 VISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDY 920
Query: 218 GCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRA 277
GC P+ YN +I G G + A + +K +++G P L TY+VL++ +C
Sbjct: 921 GCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEG 980
Query: 278 LEVLEDMAMEG------CY------------------------------PDIITYNSLVS 301
L +++ G CY PD+ TYNSL+
Sbjct: 981 LHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLIL 1040
Query: 302 FTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPP 361
G+ EE + + + G++PN T+N LI S G + V + M P
Sbjct: 1041 NLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSP 1100
Query: 362 TRVTYNIMLN 371
TY + N
Sbjct: 1101 NTGTYEQLPN 1110
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 72/187 (38%), Gaps = 36/187 (19%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
VR D T + ++ LC +G++D+G
Sbjct: 957 VRPDLKTYSVLVDCLCM-----------------------------------VGRVDEGL 981
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLS-GCSPDAITYNTIIRG 232
+ SG PDV+ N++I GL K L+ A+ L +M S G +PD TYN++I
Sbjct: 982 HYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILN 1041
Query: 233 MFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPD 292
+ G EA + + R G P + T+ LI A V + M G P+
Sbjct: 1042 LGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101
Query: 293 IITYNSL 299
TY L
Sbjct: 1102 TGTYEQL 1108
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/467 (25%), Positives = 219/467 (46%), Gaps = 18/467 (3%)
Query: 93 FERRESGELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPH 152
+ RE+ ++ D K +K + T + ++ LC + +L A + K P
Sbjct: 167 YHFRETDKMWDVYKEIKD-----KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPS 221
Query: 153 FPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVE 212
S +++ G K+G +D ++ G VP V + N++I GLC G + A++L
Sbjct: 222 VVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELAS 281
Query: 213 DMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYC 272
DM+ G PD++TYN + +G G + A +D L KG P +ITYT+L+ C+
Sbjct: 282 DMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLG 341
Query: 273 GAIRALEVLEDMAMEGC-YPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTY 331
L +L+DM G II + ++S K G +E + + + + G+ P+ V Y
Sbjct: 342 NIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAY 401
Query: 332 NTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVS 391
+ +IH L G +D + + M + P T+ +L GLC+ G+L A SL +++S
Sbjct: 402 SIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLIS 461
Query: 392 ESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMES 451
DIV YN ++ G K G ++E ++L ++ T +P + T+N I G + ++
Sbjct: 462 SGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAE 521
Query: 452 AKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVIL 511
A+++ + G+ P +++++L + + EL +EM + + Y +
Sbjct: 522 ARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFK 581
Query: 512 GLCKQRKVDIAIQALDLMVRSRCK------------PDEKIYDALIK 546
GLC+ K + L + +CK PD+ Y+ +I+
Sbjct: 582 GLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQ 628
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 183/376 (48%), Gaps = 1/376 (0%)
Query: 190 TCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQ 249
T + V+ GLC++ L+ AV + P +++N+I+ G G + A SF+
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 250 LRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVY 309
L+ G P + ++ +LI +C ALE+ DM G PD +TYN L G+
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 310 EETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWD-GVDDVLEIMNETSSPPTRVTYNI 368
+ VI ++L +G+ P+ +TY L+ G D G+ + ++++ + + ++
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368
Query: 369 MLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTN 428
ML+GLCK+G +D A+SL++ M ++ PD+V Y+ ++ GLCK G D + L +
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 429 CSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAM 488
P T+ + GL + G + A+ L +I G D + ++ + G+ +EEA+
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 488
Query: 489 ELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAV 548
EL K + + + +I G CK + + A + LD++ P Y L+ A
Sbjct: 489 ELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAY 548
Query: 549 ADSGMVKEANDLHQRL 564
A+ G K ++L + +
Sbjct: 549 ANCGNTKSIDELRREM 564
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 185/414 (44%), Gaps = 13/414 (3%)
Query: 117 DGFTNNKILQNLCTRGRL-MAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKI 175
D T +L C G + M L ++++R ++ C+ ++ GL K G+ID+ +
Sbjct: 326 DVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSL 385
Query: 176 INIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFD 235
N M G PD++ ++VI GLCK G A+ L ++M P++ T+ ++ G+
Sbjct: 386 FNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQ 445
Query: 236 KGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIIT 295
KG EA S + G ++ Y ++I+ + ALE+ + + G P + T
Sbjct: 446 KGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVAT 505
Query: 296 YNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMN 355
+NSL+ K E ++ + G+ P+ V+Y TL+ + ++ G +D++ M
Sbjct: 506 FNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMK 565
Query: 356 ETSSPPTRVTYNIMLNGLCKSG------------LLDRAISLYSTMVSESCFPDIVTYNT 403
PPT VTY+++ GLC+ + ++ M SE PD +TYNT
Sbjct: 566 AEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNT 625
Query: 404 LLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKG 463
++ LC+ + L ++ N TYNI ID L G + A + +
Sbjct: 626 IIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQN 685
Query: 464 IVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQR 517
+ + +++L C E A++L ++ + + Y VI LC++
Sbjct: 686 VSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRH 739
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 155/343 (45%), Gaps = 36/343 (10%)
Query: 225 TYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDM 284
TY+T++ G+ + +AV F + K P ++++ ++ C+ A +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 285 AMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYW 344
G P + ++N L++ G E + S++ G++P++VTYN L G
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 345 DGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESC-FPDIVTYNT 403
G +V+ M + P +TY I+L G C+ G +D + L M+S I+ +
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368
Query: 404 LLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKG 463
+LSGLCK G +DE + L + SP LV Y+I I GL ++G + A LY EM K
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 464 IVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAI 523
I+P+ TH +L +LGLC++ + A
Sbjct: 429 ILPNSRTHGAL-----------------------------------LLGLCQKGMLLEAR 453
Query: 524 QALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
LD ++ S D +Y+ +I A SG ++EA +L + +IE
Sbjct: 454 SLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIE 496
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 143/313 (45%), Gaps = 8/313 (2%)
Query: 259 ITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISN 318
+ + +L+ L R +L +L+ M + +YNS++ + + Y I +
Sbjct: 125 LVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKD 184
Query: 319 LLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGL 378
N TY+T++ L + L P+ V++N +++G CK G
Sbjct: 185 -------KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGF 237
Query: 379 LDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNI 438
+D A S + T++ P + ++N L++GLC G + E ++L + P VTYNI
Sbjct: 238 VDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNI 297
Query: 439 AIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKD 498
G +G + A E+ +M+ KG+ PD IT++ L G C + ++ + LLK+M +
Sbjct: 298 LAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRG 357
Query: 499 EKIKHTAYRCVIL-GLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
++ V+L GLCK ++D A+ + M PD Y +I + G A
Sbjct: 358 FELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 417
Query: 558 NDLHQRLIEWKIL 570
L+ + + +IL
Sbjct: 418 LWLYDEMCDKRIL 430
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 202/449 (44%), Gaps = 9/449 (2%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTN-LIRGLIKIGQIDKGCKIINI 178
T N ++ G++ A R M R+S P N LI G K G D + +
Sbjct: 275 TYNILINGFSKNGKMEEARRFHGDM-RRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDE 333
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN 238
M+ +G P T N+ I LC G + A +L+ M+ +PD ++YNT++ G G
Sbjct: 334 MLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMGK 389
Query: 239 FNEAVSFWKDQLRKG-CPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYN 297
F EA S D LR G P ++TY LI+ +C A + E+M + +PD+ITY
Sbjct: 390 FVEA-SLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYT 448
Query: 298 SLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNET 357
+LV K G V +L +G++P+ Y T G D + E M T
Sbjct: 449 TLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVAT 508
Query: 358 SS-PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDE 416
P YN+ ++GLCK G L +AI + PD VTY T++ G + G
Sbjct: 509 DHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKM 568
Query: 417 GIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAW 476
L + P ++TY + I G A+ G +E A + +EM +G+ P+ +TH++L +
Sbjct: 569 ARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLY 628
Query: 477 GFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKP 536
G C ++EA L +M ++ +Y +I C K + ++ M+ +P
Sbjct: 629 GMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEP 688
Query: 537 DEKIYDALIKAVADSGMVKEANDLHQRLI 565
D + AL K + +E L + L+
Sbjct: 689 DGYTHRALFKHLEKDHESREVEFLERLLL 717
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 186/397 (46%), Gaps = 5/397 (1%)
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN 238
M+ G +P V CN+V+ L + A + E M G P IT+NT++ F G+
Sbjct: 194 MIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGD 253
Query: 239 FNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNS 298
W + R+ +TY +LI + A DM G ++N
Sbjct: 254 LERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNP 313
Query: 299 LVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETS 358
L+ KQG++++ + V +L+ G+ P TYN I +L G +DD E+++ +
Sbjct: 314 LIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFG---RIDDARELLSSMA 370
Query: 359 SPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGI 418
+P V+YN +++G K G A L+ + + P IVTYNTL+ GLC+ G ++
Sbjct: 371 APDV-VSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQ 429
Query: 419 QLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGF 478
+L +T P ++TY + G + G++ A E+Y EM+ KGI PD +++ A G
Sbjct: 430 RLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGE 489
Query: 479 CGVDQLEEAMELLKEMHKKDEKIKH-TAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPD 537
+ ++A L +EM D T Y I GLCK + AI+ + R PD
Sbjct: 490 LRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPD 549
Query: 538 EKIYDALIKAVADSGMVKEANDLHQRLIEWKILKTEI 574
Y +I+ ++G K A +L+ ++ ++ + I
Sbjct: 550 HVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVI 586
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 129/494 (26%), Positives = 210/494 (42%), Gaps = 44/494 (8%)
Query: 112 PFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDK 171
P VRN N +L+ L + A+ + E M +P + ++ K G +++
Sbjct: 201 PSVRN----CNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLER 256
Query: 172 GCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIR 231
KI M +T N++I G K G ++ A DM SG + ++N +I
Sbjct: 257 VDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIE 316
Query: 232 GMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYP 291
G +G F++A + L G P TY + I +C + A E+L MA P
Sbjct: 317 GYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----P 372
Query: 292 DIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVL 351
D+++YN+L+ K G + E L+ +L + + P+ VTYNTLI L G +G +
Sbjct: 373 DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLK 432
Query: 352 EIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMV--------------------- 390
E M P +TY ++ G K+G L A +Y M+
Sbjct: 433 EEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRL 492
Query: 391 --SESCF-------------PDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVT 435
S+ F PD+ YN + GLCK G + + I+ + P VT
Sbjct: 493 GDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVT 552
Query: 436 YNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMH 495
Y I G G + A+ LY EM+ K + P IT+ L +G +LE+A + EM
Sbjct: 553 YTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMK 612
Query: 496 KKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVK 555
K+ + + ++ G+CK +D A + L M P++ Y LI D +
Sbjct: 613 KRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWE 672
Query: 556 EANDLHQRLIEWKI 569
E L++ +++ +I
Sbjct: 673 EVVKLYKEMLDKEI 686
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 197/453 (43%), Gaps = 40/453 (8%)
Query: 141 IEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCK 200
E M RK +P +C +++ L ++K + M+ G +P VIT N ++ K
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 201 RGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLIT 260
G L+ + +M +TYN +I G G EA F D R G +
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 261 YTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLL 320
+ LIE C+ A V ++M G YP TYN + G ++ LL
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDA----RELL 366
Query: 321 SRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLD 380
S P+ V+YNTL+H G + + + + P+ VTYN +++GLC+SG L+
Sbjct: 367 SSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 426
Query: 381 RAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFV-------------------------- 414
A L M ++ FPD++TY TL+ G K G +
Sbjct: 427 GAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRA 486
Query: 415 ---------DEGIQLLYLLTGTN-CSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGI 464
D+ +L + T+ +P L YN+ IDGL ++G++ A E ++ G+
Sbjct: 487 VGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGL 546
Query: 465 VPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQ 524
VPD +T++++ G+ Q + A L EM +K Y +I G K +++ A Q
Sbjct: 547 VPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQ 606
Query: 525 ALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
M + +P+ ++AL+ + +G + EA
Sbjct: 607 YSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEA 639
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 129/292 (44%), Gaps = 4/292 (1%)
Query: 274 AIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNT 333
A + L E M +G P + N ++ + + V ++ G+ P +T+NT
Sbjct: 184 AEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNT 243
Query: 334 LIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSES 393
++ S G + VD + M + + VTYNI++NG K+G ++ A + M
Sbjct: 244 MLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSG 303
Query: 394 CFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAK 453
++N L+ G CK+G D+ + + P TYNI I L G ++ A+
Sbjct: 304 FAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAR 363
Query: 454 ELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGL 513
EL S M PD +++++L G+ + + EA L ++ D Y +I GL
Sbjct: 364 ELLSSMAA----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGL 419
Query: 514 CKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLI 565
C+ ++ A + + M PD Y L+K +G + A +++ ++
Sbjct: 420 CESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEML 471
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 89/200 (44%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N + LC G L+ A + R +P + T +IRG ++ GQ + + M+
Sbjct: 519 NVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLR 578
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
P VIT ++I G K G L+ A +M G P+ +T+N ++ GM GN +E
Sbjct: 579 KRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDE 638
Query: 242 AVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVS 301
A + +G PP +YT+LI C + +++ ++M + PD T+ +L
Sbjct: 639 AYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFK 698
Query: 302 FTAKQGVYEETYLVISNLLS 321
K E + LLS
Sbjct: 699 HLEKDHESREVEFLERLLLS 718
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 83/186 (44%)
Query: 375 KSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLV 434
K + ++ + + M+ + P + N +L L +++ + + P ++
Sbjct: 180 KKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVI 239
Query: 435 TYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEM 494
T+N +D + G +E +++ EM + I E+T++ L GF ++EEA +M
Sbjct: 240 TFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDM 299
Query: 495 HKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMV 554
+ + ++ +I G CKQ D A D M+ + P Y+ I A+ D G +
Sbjct: 300 RRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRI 359
Query: 555 KEANDL 560
+A +L
Sbjct: 360 DDAREL 365
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 77/191 (40%), Gaps = 9/191 (4%)
Query: 84 DHEDWGLESFERRESGELVDPGKPVKPPPFVRN--------DGFTNNKILQNLCTRGRLM 135
DH L + R G L G VK F R D T +++ G+
Sbjct: 509 DHHAPDLTIYNVRIDG-LCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFK 567
Query: 136 AAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVI 195
A L + M RK P + LI G K G++++ + M G P+V+T N ++
Sbjct: 568 MARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALL 627
Query: 196 GGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCP 255
G+CK G + A + M G P+ +Y +I D + E V +K+ L K
Sbjct: 628 YGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIE 687
Query: 256 PYLITYTVLIE 266
P T+ L +
Sbjct: 688 PDGYTHRALFK 698
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 126/503 (25%), Positives = 224/503 (44%), Gaps = 59/503 (11%)
Query: 124 ILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSG 183
++ LC GRL A L + M K P + T LI+ L G IDK + + M+ G
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRG 331
Query: 184 GVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAV 243
P+V T ++I GLC+ G ++ A + M P ITYN +I G G A
Sbjct: 332 CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAF 391
Query: 244 SFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFT 303
++ C P + T+ L+E +CR +A+ +L+ M G PDI++YN L+
Sbjct: 392 ELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGL 451
Query: 304 AKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTR 363
++G Y ++S++ ++P+ +T+ +I++ G D L +M
Sbjct: 452 CREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDE 511
Query: 364 VTYNIMLNGLCKSGLLDRAISLYST------------------MVSESC----------- 394
VT +++G+CK G A+ + T M+S+ C
Sbjct: 512 VTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGK 571
Query: 395 ------FPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGS 448
P +VTY TL+ GL + G + ++L L+ + C P + Y I I+GL + G
Sbjct: 572 INKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGR 631
Query: 449 MESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRC 508
+E A++L S M G+ P+ +T++ + G+ +L+ A+E ++ M ++ ++ Y
Sbjct: 632 VEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSS 691
Query: 509 VILGLC-KQRKVDIAIQAL--DLMVRSRCKPDEKIYDALIKAVAD--------------- 550
++ G Q+ +D + ++ D+ +R + D + + LI V
Sbjct: 692 LLQGFVLSQKGIDNSEESTVSDIALR---ETDPECINELISVVEQLGGCISGLCIFLVTR 748
Query: 551 ---SGMVKEANDLHQRLIEWKIL 570
G E+NDL Q ++E +
Sbjct: 749 LCKEGRTDESNDLVQNVLERGVF 771
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 120/471 (25%), Positives = 209/471 (44%), Gaps = 36/471 (7%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARK-SQIPHFPSCTNLIRGLIKIGQIDKGCKI 175
D +L C L A ++ ++M+++ + P+ S + LI GL ++G++++ +
Sbjct: 229 DSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGL 288
Query: 176 INIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFD 235
+ M G P T ++I LC RG + A +L ++M GC P+ TY +I G+
Sbjct: 289 KDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCR 348
Query: 236 KGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIIT 295
G EA + ++ P +ITY LI C+ + A E+L M C P++ T
Sbjct: 349 DGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRT 408
Query: 296 YNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMN 355
+N L+ + G + ++ +L G+ P+ V+YN LI L G+ + +L MN
Sbjct: 409 FNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMN 468
Query: 356 ETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEG--- 412
P +T+ ++N CK G D A + M+ + D VT TL+ G+CK G
Sbjct: 469 CFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTR 528
Query: 413 ---FVDEGIQLLYLLT------------GTNCS-----------------PGLVTYNIAI 440
F+ E + + +LT C P +VTY +
Sbjct: 529 DALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLV 588
Query: 441 DGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEK 500
DGL R G + + + M G +P+ ++ + G C ++EEA +LL M
Sbjct: 589 DGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVS 648
Query: 501 IKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADS 551
H Y ++ G K+D A++ + MV + +++IY +L++ S
Sbjct: 649 PNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLS 699
Score = 165 bits (417), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 117/440 (26%), Positives = 204/440 (46%), Gaps = 38/440 (8%)
Query: 158 NLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLS 217
++ L K G + ++ ++ G V D ++ G C+ L+ A+ + + MS
Sbjct: 200 TIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKE 259
Query: 218 -GCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQL-RKGCPPYLITYTVLIELVCRYCGAI 275
C+P++++Y+ +I G+ + G EA KDQ+ KGC P TYTVLI+ +C
Sbjct: 260 VTCAPNSVSYSILIHGLCEVGRLEEAFGL-KDQMGEKGCQPSTRTYTVLIKALCDRGLID 318
Query: 276 RALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLI 335
+A + ++M GC P++ TY L+ + G EE V ++ + P+ +TYN LI
Sbjct: 319 KAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALI 378
Query: 336 HSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCF 395
+ G ++L +M + + P T+N ++ GLC+ G +A+ L M+
Sbjct: 379 NGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLS 438
Query: 396 PDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKEL 455
PDIV+YN L+ GLC+EG ++ +LL + + P +T+ I+ + G + A
Sbjct: 439 PDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAF 498
Query: 456 YSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLK------------------EMHKK 497
M+ KGI DE+T ++L G C V + +A+ +L+ +M K
Sbjct: 499 LGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSK 558
Query: 498 DEKIKH-----------------TAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKI 540
K+K Y ++ GL + + + + L+LM S C P+
Sbjct: 559 GCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYP 618
Query: 541 YDALIKAVADSGMVKEANDL 560
Y +I + G V+EA L
Sbjct: 619 YTIIINGLCQFGRVEEAEKL 638
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 170/360 (47%), Gaps = 1/360 (0%)
Query: 214 MSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCG 273
M G I Y TI+ + G A F L+ G T L+ CR
Sbjct: 186 MEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLN 245
Query: 274 AIRALEVLEDMAME-GCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYN 332
AL+V + M+ E C P+ ++Y+ L+ + G EE + + + +G QP+ TY
Sbjct: 246 LRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYT 305
Query: 333 TLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSE 392
LI +L G D ++ + M P TY ++++GLC+ G ++ A + MV +
Sbjct: 306 VLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD 365
Query: 393 SCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESA 452
FP ++TYN L++G CK+G V +LL ++ C P + T+N ++GL R+G A
Sbjct: 366 RIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKA 425
Query: 453 KELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILG 512
L M+ G+ PD ++++ L G C + A +LL M+ D + + +I
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINA 485
Query: 513 LCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKILKT 572
CKQ K D+A L LM+R DE LI V G ++A + + L++ +IL T
Sbjct: 486 FCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTT 545
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 180/380 (47%), Gaps = 3/380 (0%)
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN 238
M G V +I ++ LCK GY ++A + + G D+ +++ G N
Sbjct: 186 MEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLN 245
Query: 239 FNEAVSFWKDQLRK--GCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
+A+ + D + K C P ++Y++LI +C A + + M +GC P TY
Sbjct: 246 LRDALKVF-DVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTY 304
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
L+ +G+ ++ + + ++ RG +PN TY LI L G + + V M +
Sbjct: 305 TVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK 364
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDE 416
P+ +TYN ++NG CK G + A L + M +C P++ T+N L+ GLC+ G +
Sbjct: 365 DRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYK 424
Query: 417 GIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAW 476
+ LL + SP +V+YN+ IDGL R G M +A +L S M I PD +T +++
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484
Query: 477 GFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKP 536
FC + + A L M +K + +I G+CK K A+ L+ +V+ R
Sbjct: 485 AFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILT 544
Query: 537 DEKIYDALIKAVADSGMVKE 556
+ ++ ++ VKE
Sbjct: 545 TPHSLNVILDMLSKGCKVKE 564
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 129/313 (41%), Gaps = 57/313 (18%)
Query: 150 IPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVD 209
+P + T L+ GLI+ G I +I+ +M +SG +P+V ++I GLC+ G ++ A
Sbjct: 578 VPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEK 637
Query: 210 LVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVC 269
L+ M SG SP+ +TY +++G + G +
Sbjct: 638 LLSAMQDSGVSPNHVTYTVMVKGYVNNGKLD----------------------------- 668
Query: 270 RYCGAIRALEVLEDMAMEGCYPDIITYNSLVS--FTAKQGVYEETYLVISNLLSRGMQPN 327
RALE + M G + Y+SL+ +++G+ +S++ R P
Sbjct: 669 ------RALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPE 722
Query: 328 AVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYS 387
+ N LI + G G L I ++ LCK G D + L
Sbjct: 723 CI--NELISVVEQLG---GCISGLCIF--------------LVTRLCKEGRTDESNDLVQ 763
Query: 388 TMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMG 447
++ F + + ++ C + + ++L+ L+ + P ++ + I GL + G
Sbjct: 764 NVLERGVFLE-KAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEG 822
Query: 448 SMESAKELYSEMI 460
E A+EL E++
Sbjct: 823 DAERARELVMELL 835
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 95/210 (45%), Gaps = 1/210 (0%)
Query: 366 YNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLT 425
Y+ +L L K L A Y M ++ ++ Y T+++ LCK G+ + + +
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222
Query: 426 GTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGK-GIVPDEITHSSLAWGFCGVDQL 484
+ G R ++ A +++ M + P+ +++S L G C V +L
Sbjct: 223 KIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRL 282
Query: 485 EEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDAL 544
EEA L +M +K + Y +I LC + +D A D M+ CKP+ Y L
Sbjct: 283 EEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVL 342
Query: 545 IKAVADSGMVKEANDLHQRLIEWKILKTEI 574
I + G ++EAN + +++++ +I + I
Sbjct: 343 IDGLCRDGKIEEANGVCRKMVKDRIFPSVI 372
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 203/431 (47%), Gaps = 1/431 (0%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T+N ++ L GR+ ++ E M + + + ++LI GL G +DK + N +
Sbjct: 257 THNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNEL 316
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
DV+T N ++GG C+ G +K +++L M S + ++YN +I+G+ + G
Sbjct: 317 DERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKI 375
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
+EA W+ KG TY + I +C +AL V++++ G + D+ Y S+
Sbjct: 376 DEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASI 435
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS 359
+ K+ EE ++ + G++ N+ N LI L L M +
Sbjct: 436 IDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGC 495
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQ 419
PT V+YNI++ GLCK+G A + M+ PD+ TY+ LL GLC++ +D ++
Sbjct: 496 RPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALE 555
Query: 420 LLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFC 479
L + + ++ +NI I GL +G ++ A + + M + + +T+++L GF
Sbjct: 556 LWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFF 615
Query: 480 GVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEK 539
V A + M+K + +Y ++ GLC R V A++ D P
Sbjct: 616 KVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVY 675
Query: 540 IYDALIKAVAD 550
++ L++AV +
Sbjct: 676 TWNILVRAVVN 686
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 208/449 (46%), Gaps = 14/449 (3%)
Query: 130 TRGRLMAAARLIEIMARKSQI----PHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGV 185
T G+ + +++ R +I P S L+ ++ Q K + +G
Sbjct: 87 TYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVA 146
Query: 186 PDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSF 245
P++ T N++I CK+ + A ++ M G PD +Y+T+I + G ++A+
Sbjct: 147 PNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALEL 206
Query: 246 WKDQLRKGCPPYLITYTVLIELVCRYCGAIRALE----VLEDMAMEGCYPDIITYNSLVS 301
+ + +G P + Y +LI+ + A+E +LED ++ YP++ T+N ++S
Sbjct: 207 FDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSV---YPNVKTHNIMIS 263
Query: 302 FTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPP 361
+K G ++ + + + + TY++LIH L G D + V ++E +
Sbjct: 264 GLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASI 323
Query: 362 TRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLL 421
VTYN ML G C+ G + ++ L+ M ++ +IV+YN L+ GL + G +DE +
Sbjct: 324 DVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGKIDEATMIW 382
Query: 422 YLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGV 481
L+ + TY I I GL G + A + E+ G D ++S+ C
Sbjct: 383 RLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKK 442
Query: 482 DQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIY 541
+LEEA L+KEM K ++ +I GL + ++ A L M ++ C+P Y
Sbjct: 443 KRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSY 502
Query: 542 DALIKAVADSGMVKEANDLHQRLIE--WK 568
+ LI + +G EA+ + ++E WK
Sbjct: 503 NILICGLCKAGKFGEASAFVKEMLENGWK 531
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 201/439 (45%), Gaps = 2/439 (0%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T N +++ C + A ++ M ++ P S + +I L K G++D ++ + M
Sbjct: 151 TYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEM 210
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDM-SLSGCSPDAITYNTIIRGMFDKGN 238
G PDV N++I G K K+A++L + + S P+ T+N +I G+ G
Sbjct: 211 SERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGR 270
Query: 239 FNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNS 298
++ + W+ + L TY+ LI +C +A V ++ D++TYN+
Sbjct: 271 VDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNT 330
Query: 299 LVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETS 358
++ + G +E+ L + ++ N V+YN LI L +G D + +M
Sbjct: 331 MLGGFCRCGKIKES-LELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKG 389
Query: 359 SPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGI 418
+ TY I ++GLC +G +++A+ + + S D+ Y +++ LCK+ ++E
Sbjct: 390 YAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEAS 449
Query: 419 QLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGF 478
L+ ++ N I GL R + A EM G P ++++ L G
Sbjct: 450 NLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGL 509
Query: 479 CGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDE 538
C + EA +KEM + K Y ++ GLC+ RK+D+A++ ++S + D
Sbjct: 510 CKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDV 569
Query: 539 KIYDALIKAVADSGMVKEA 557
+++ LI + G + +A
Sbjct: 570 MMHNILIHGLCSVGKLDDA 588
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/447 (25%), Positives = 196/447 (43%), Gaps = 4/447 (0%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N +L + + L P+ + LI+ K + +K ++ M
Sbjct: 118 NTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWK 177
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
G PDV + + VI L K G L A++L ++MS G +PD YN +I G + +
Sbjct: 178 EGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKT 237
Query: 242 AVSFWKDQLR-KGCPPYLITYTVLIELVCRYCGAIR-ALEVLEDMAMEGCYPDIITYNSL 299
A+ W L P + T+ ++I + + CG + L++ E M D+ TY+SL
Sbjct: 238 AMELWDRLLEDSSVYPNVKTHNIMISGLSK-CGRVDDCLKIWERMKQNEREKDLYTYSSL 296
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS 359
+ G ++ V + L R + VTYNT++ G ++ IM +S
Sbjct: 297 IHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNS 356
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQ 419
V+YNI++ GL ++G +D A ++ M ++ D TY + GLC G+V++ +
Sbjct: 357 VNI-VSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALG 415
Query: 420 LLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFC 479
++ + + + Y ID L + +E A L EM G+ + ++L G
Sbjct: 416 VMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLI 475
Query: 480 GVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEK 539
+L EA L+EM K + +Y +I GLCK K A + M+ + KPD K
Sbjct: 476 RDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLK 535
Query: 540 IYDALIKAVADSGMVKEANDLHQRLIE 566
Y L+ + + A +L + ++
Sbjct: 536 TYSILLCGLCRDRKIDLALELWHQFLQ 562
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 126/260 (48%), Gaps = 6/260 (2%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D + I+ LC + RL A+ L++ M++ + C LI GLI+ ++ + +
Sbjct: 428 DVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFL 487
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
M +G P V++ N++I GLCK G A V++M +G PD TY+ ++ G+
Sbjct: 488 REMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRD 547
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
+ A+ W L+ G ++ + +LI +C A+ V+ +M C +++TY
Sbjct: 548 RKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTY 607
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
N+L+ K G ++ + G+QP+ ++YNT++ L GV +E ++
Sbjct: 608 NTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLC---MCRGVSYAMEFFDD 664
Query: 357 TSSP---PTRVTYNIMLNGL 373
+ PT T+NI++ +
Sbjct: 665 ARNHGIFPTVYTWNILVRAV 684
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 117/250 (46%), Gaps = 7/250 (2%)
Query: 323 GMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRA 382
G +P +YNTL+++ W V+ + P TYN+++ CK ++A
Sbjct: 109 GCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKA 168
Query: 383 ISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDG 442
M E PD+ +Y+T+++ L K G +D+ ++L ++ +P + YNI IDG
Sbjct: 169 RGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDG 228
Query: 443 LARMGSMESAKELYSEMI-GKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKI 501
+ ++A EL+ ++ + P+ TH+ + G ++++ +++ + M + + +
Sbjct: 229 FLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREK 288
Query: 502 KHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLH 561
Y +I GLC VD A + + + D Y+ ++ G +KE+ +L
Sbjct: 289 DLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLEL- 347
Query: 562 QRLIEWKILK 571
W+I++
Sbjct: 348 -----WRIME 352
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 59/123 (47%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
+ D +N ++ LC+ G+L A ++ M ++ + + L+ G K+G ++
Sbjct: 565 LETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRAT 624
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
I M G PD+I+ N ++ GLC + A++ +D G P T+N ++R +
Sbjct: 625 VIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684
Query: 234 FDK 236
++
Sbjct: 685 VNR 687
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 187/400 (46%), Gaps = 9/400 (2%)
Query: 87 DWGLESFERRESGELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMAR 146
D LE FE+ G+ D G +K D N ++ LC GRL A L+ M
Sbjct: 346 DEALEVFEQMR-GKRTDDGNVIKA------DSIHFNTLIDGLCKVGRLKEAEELLVRMKL 398
Query: 147 KSQ-IPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLK 205
+ + +P+ + LI G + G+++ ++++ M P+V+T N ++GG+C+ L
Sbjct: 399 EERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLN 458
Query: 206 SAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLI 265
AV DM G + +TY T+I N +A+ +++ L GC P Y LI
Sbjct: 459 MAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALI 518
Query: 266 ELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQ 325
+C+ A+ V+E + G D++ YN L+ + E+ Y +++++ G +
Sbjct: 519 SGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKK 578
Query: 326 PNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISL 385
P+++TYNTLI H ++ V+ ++E M E PT TY +++ C G LD A+ L
Sbjct: 579 PDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKL 638
Query: 386 YSTM-VSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLA 444
+ M + P+ V YN L++ K G + + L + P + TYN L
Sbjct: 639 FKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLN 698
Query: 445 RMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQL 484
E+ +L EM+ + P++IT L G D+L
Sbjct: 699 EKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDEL 738
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/480 (23%), Positives = 205/480 (42%), Gaps = 17/480 (3%)
Query: 101 LVDPGKPVKPPPFVRNDGFTNNKILQNLCT----RGRLMAAARLIEIMARKSQ---IPHF 153
LVD V + F N+I ++ + RL+ ++I +++R S P+
Sbjct: 200 LVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNS 259
Query: 154 PSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVED 213
T I L K + + I++ ++ + + N ++ L + + DLV
Sbjct: 260 VWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLK 319
Query: 214 MSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKG-------CPPYLITYTVLIE 266
M PD +T +I + +EA+ + +Q+R I + LI+
Sbjct: 320 MDEVKIRPDVVTLGILINTLCKSRRVDEALEVF-EQMRGKRTDDGNVIKADSIHFNTLID 378
Query: 267 LVCRYCGAIRALEVLEDMAMEG-CYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQ 325
+C+ A E+L M +E C P+ +TYN L+ + G E V+S + ++
Sbjct: 379 GLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIK 438
Query: 326 PNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISL 385
PN VT NT++ + H + M + VTY +++ C +++A+
Sbjct: 439 PNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYW 498
Query: 386 YSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLAR 445
Y M+ C PD Y L+SGLC+ + I+++ L S L+ YN+ I
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD 558
Query: 446 MGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTA 505
+ E E+ ++M +G PD IT+++L F E ++++M + T
Sbjct: 559 KNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTT 618
Query: 506 YRCVILGLCKQRKVDIAIQAL-DLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
Y VI C ++D A++ D+ + S+ P+ IY+ LI A + G +A L + +
Sbjct: 619 YGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 112/460 (24%), Positives = 194/460 (42%), Gaps = 27/460 (5%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQI--------DKGC 173
N ++ L G + A ++++ M +K + FP N I I + ++ +K
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESV--FPP--NRITADIVLHEVWKERLLTEEKII 244
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTII--- 230
+I+ G P+ + I LCK +A D++ D+ + +A +N ++
Sbjct: 245 ALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCL 304
Query: 231 -RGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGC 289
R M D N+ V D+++ P ++T +LI +C+ ALEV E M +
Sbjct: 305 GRNM-DISRMNDLV-LKMDEVK--IRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRT 360
Query: 290 ------YPDIITYNSLVSFTAKQGVYEETY-LVISNLLSRGMQPNAVTYNTLIHSLSSHG 342
D I +N+L+ K G +E L++ L PNAVTYN LI G
Sbjct: 361 DDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAG 420
Query: 343 YWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYN 402
+ +V+ M E P VT N ++ G+C+ L+ A+ + M E ++VTY
Sbjct: 421 KLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYM 480
Query: 403 TLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGK 462
TL+ C V++ + + CSP Y I GL ++ A + ++
Sbjct: 481 TLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEG 540
Query: 463 GIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIA 522
G D + ++ L FC + E+ E+L +M K+ +K Y +I K + +
Sbjct: 541 GFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESV 600
Query: 523 IQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQ 562
+ ++ M P Y A+I A G + EA L +
Sbjct: 601 ERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFK 640
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 155/319 (48%), Gaps = 19/319 (5%)
Query: 263 VLIELVCRYCGAIRALEVLEDMAM-EGCYP-DIITYNSLVSFTAKQGVYEETYLV--ISN 318
V+++++ R A +VL++M E +P + IT + ++ K+ + E ++ IS
Sbjct: 190 VVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISR 249
Query: 319 LLSRGMQPNAVTYNTLIHSL----SSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLC 374
S G+ PN+V I SL ++ WD + D+++ +PP +N +L+ L
Sbjct: 250 FSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPP----FNALLSCLG 305
Query: 375 KSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLV 434
++ + R L M PD+VT L++ LCK VDE +++ + G G V
Sbjct: 306 RNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNV 365
Query: 435 T------YNIAIDGLARMGSMESAKELYSEM-IGKGIVPDEITHSSLAWGFCGVDQLEEA 487
+N IDGL ++G ++ A+EL M + + VP+ +T++ L G+C +LE A
Sbjct: 366 IKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETA 425
Query: 488 MELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKA 547
E++ M + + K ++ G+C+ +++A+ M + K + Y LI A
Sbjct: 426 KEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHA 485
Query: 548 VADSGMVKEANDLHQRLIE 566
V++A +++++E
Sbjct: 486 CCSVSNVEKAMYWYEKMLE 504
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 178/402 (44%), Gaps = 38/402 (9%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D + N L LC ++ A + M ++ + P S T LI GL + G++ +I
Sbjct: 113 DIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIW 172
Query: 177 NIMVMSGGVPDVITC------------------------------------NMVIGGLCK 200
N M+ SG PD C N +I G CK
Sbjct: 173 NAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCK 232
Query: 201 RGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLIT 260
G ++ A L MS GC PD +TYN ++ +D A + +R G +
Sbjct: 233 AGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYS 292
Query: 261 YTVLIELVCRYCGAIRALEVL-EDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNL 319
Y L++ CR + + ++M G + D+++Y++L+ + + Y + +
Sbjct: 293 YNQLLKRHCRVSHPDKCYNFMVKEMEPRG-FCDVVSYSTLIETFCRASNTRKAYRLFEEM 351
Query: 320 LSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLL 379
+GM N VTY +LI + G +L+ M E P R+ Y +L+ LCKSG +
Sbjct: 352 RQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNV 411
Query: 380 DRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIA 439
D+A +++ M+ PD ++YN+L+SGLC+ G V E I+L + G C P +T+
Sbjct: 412 DKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFI 471
Query: 440 IDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGV 481
I GL R + +A +++ +M+ KG D +L C +
Sbjct: 472 IGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASCSM 513
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/442 (25%), Positives = 196/442 (44%), Gaps = 50/442 (11%)
Query: 148 SQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSA 207
S IP + + I GL K+ + D +++ M G +PD+ N+ + LC+ + A
Sbjct: 76 SLIPF--TYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFA 133
Query: 208 VDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPP----------- 256
V M G PD ++Y +I G+F G +AV W +R G P
Sbjct: 134 VQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVG 193
Query: 257 -------------------------YLITYTVLIELVCRYCGAIRALEVLED-MAMEGCY 290
+ Y LI C+ G I E L+ M+ GC
Sbjct: 194 LCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCK-AGRIEKAEALKSYMSKIGCE 252
Query: 291 PDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLI--HSLSSHGYWDGVD 348
PD++TYN L+++ + + V++ ++ G+Q +A +YN L+ H SH D
Sbjct: 253 PDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHP-----D 307
Query: 349 DVLEIMNETSSPP---TRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLL 405
M + P V+Y+ ++ C++ +A L+ M + ++VTY +L+
Sbjct: 308 KCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLI 367
Query: 406 SGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIV 465
+EG +LL +T SP + Y +D L + G+++ A ++++MI I
Sbjct: 368 KAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEIT 427
Query: 466 PDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQA 525
PD I+++SL G C ++ EA++L ++M K+ ++ +I GL + +K+ A +
Sbjct: 428 PDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKV 487
Query: 526 LDLMVRSRCKPDEKIYDALIKA 547
D M+ D + D LIKA
Sbjct: 488 WDQMMDKGFTLDRDVSDTLIKA 509
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 179/440 (40%), Gaps = 38/440 (8%)
Query: 160 IRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGC 219
I L+K G ID ++ + M S N IG L + + A + DM G
Sbjct: 16 IANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGF 75
Query: 220 SPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALE 279
S TY+ I G+ F+ + D G P + + V ++L+CR A++
Sbjct: 76 SLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQ 135
Query: 280 VLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLS 339
M G PD+++Y L++ + G + + + ++ G+ P+ L+ L
Sbjct: 136 TFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLC 195
Query: 340 SHGYWD-GVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDI 398
D + V E + + V YN +++G CK+G +++A +L S M C PD+
Sbjct: 196 HARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDL 255
Query: 399 VTYNTLLS------------GLCKEGFVDEGIQL--------------------LYLLTG 426
VTYN LL+ G+ E V GIQL Y
Sbjct: 256 VTYNVLLNYYYDNNMLKRAEGVMAE-MVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMV 314
Query: 427 TNCSP----GLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVD 482
P +V+Y+ I+ R + A L+ EM KG+V + +T++SL F
Sbjct: 315 KEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREG 374
Query: 483 QLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYD 542
A +LL +M + Y ++ LCK VD A + M+ PD Y+
Sbjct: 375 NSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYN 434
Query: 543 ALIKAVADSGMVKEANDLHQ 562
+LI + SG V EA L +
Sbjct: 435 SLISGLCRSGRVTEAIKLFE 454
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 109/276 (39%), Gaps = 71/276 (25%)
Query: 361 PTRVTYNIMLNGLCKSGLLDRAISLYSTM--------------------------VSESC 394
R+ Y + L KSG++D A+ ++ M ++E+
Sbjct: 7 AVRLAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAI 66
Query: 395 FPDI---------VTYNTLLSGLCKE----------------GFVDE------------- 416
+ D+ TY+ +SGLCK GF+ +
Sbjct: 67 YWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCR 126
Query: 417 ------GIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEIT 470
+Q + + P +V+Y I I+GL R G + A E+++ MI G+ PD
Sbjct: 127 ENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKA 186
Query: 471 HSSLAWGFCGVDQLEEAMELLKEMHKKDE-KIKHTAYRCVILGLCKQRKVDIAIQALDLM 529
++L G C +++ A E++ E K K+ Y +I G CK +++ A M
Sbjct: 187 CAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYM 246
Query: 530 VRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLI 565
+ C+PD Y+ L+ D+ M+K A + ++
Sbjct: 247 SKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMV 282
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 2/195 (1%)
Query: 106 KPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIK 165
K ++P F D + + +++ C A RL E M +K + + + T+LI+ ++
Sbjct: 315 KEMEPRGFC--DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLR 372
Query: 166 IGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAIT 225
G K+++ M G PD I ++ LCK G + A + DM +PDAI+
Sbjct: 373 EGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAIS 432
Query: 226 YNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMA 285
YN++I G+ G EA+ ++D K C P +T+ +I + R A +V + M
Sbjct: 433 YNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMM 492
Query: 286 MEGCYPDIITYNSLV 300
+G D ++L+
Sbjct: 493 DKGFTLDRDVSDTLI 507
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/403 (29%), Positives = 191/403 (47%), Gaps = 6/403 (1%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
V+ + +T + +L LC G++ A ++ K +P+ +I G + G +
Sbjct: 350 VKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGAR 409
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
I M G PD + N +I C+ G +++A V M L G SP TYN +I G
Sbjct: 410 MKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGY 469
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
K F++ K+ G P +++Y LI +C+ + A V DM G P +
Sbjct: 470 GRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKV 529
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
YN L+ +G E+ + +L +G++ N VTYNTLI LS G +D+L
Sbjct: 530 RIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLE 589
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
++ P TYN +++G +G + R I+LY M P + TY+ L+S LC +
Sbjct: 590 ISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LCTK-- 646
Query: 414 VDEGIQLLYLLTGT-NCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHS 472
EGI+L L G + P L+ YN + A G ME A L +MI K I D+ T++
Sbjct: 647 --EGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYN 704
Query: 473 SLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCK 515
SL G V +L E L+ EM+ ++ + + Y ++ G C+
Sbjct: 705 SLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCE 747
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 122/486 (25%), Positives = 213/486 (43%), Gaps = 39/486 (8%)
Query: 119 FTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINI 178
F N ++ LC R+ A +L + M + +P + LI G K G +K K+
Sbjct: 215 FIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRER 274
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRG------ 232
M P +IT N ++ GL K G ++ A +++++M G PDA T++ + G
Sbjct: 275 MKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEK 334
Query: 233 -----------------------------MFDKGNFNEAVSFWKDQLRKGCPPYLITYTV 263
+ +G +A ++ KG P + Y
Sbjct: 335 AEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNT 394
Query: 264 LIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRG 323
+I+ CR + A +E M +G PD + YN L+ + G E ++ + +G
Sbjct: 395 MIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKG 454
Query: 324 MQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAI 383
+ P+ TYN LI +D D+L+ M + + P V+Y ++N LCK L A
Sbjct: 455 VSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQ 514
Query: 384 SLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGL 443
+ M P + YN L+ G C +G +++ + + LVTYN IDGL
Sbjct: 515 IVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGL 574
Query: 444 ARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKH 503
+ G + A++L E+ KG+ PD T++SL G+ ++ + L +EM + K
Sbjct: 575 SMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTL 634
Query: 504 TAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQR 563
Y +I LC + +++ + M KPD +Y+ ++ A G +++A +L ++
Sbjct: 635 KTYHLLI-SLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQ 690
Query: 564 LIEWKI 569
+IE I
Sbjct: 691 MIEKSI 696
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 190/434 (43%), Gaps = 2/434 (0%)
Query: 137 AARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIG 196
AA L + + P S T L+ L+K Q + ++ S P I
Sbjct: 128 AADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQ 187
Query: 197 GLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPP 256
K + ++L M P YN +I G+ N+A + + L + P
Sbjct: 188 AAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLP 247
Query: 257 YLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVI 316
LITY LI+ C+ ++ +V E M + P +IT+N+L+ K G+ E+ V+
Sbjct: 248 SLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVL 307
Query: 317 SNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKS 376
+ G P+A T++ L SS+ + V E ++ T +I+LN LCK
Sbjct: 308 KEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKE 367
Query: 377 GLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTY 436
G +++A + +++ P+ V YNT++ G C++G + + + P + Y
Sbjct: 368 GKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAY 427
Query: 437 NIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHK 496
N I +G ME+A++ ++M KG+ P T++ L G+ + ++ ++LKEM
Sbjct: 428 NCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMED 487
Query: 497 KDEKIKHTAYRCVILGLCKQRK-VDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVK 555
+Y +I LCK K ++ I D+ R P +IY+ LI G ++
Sbjct: 488 NGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRG-VSPKVRIYNMLIDGCCSKGKIE 546
Query: 556 EANDLHQRLIEWKI 569
+A + +++ I
Sbjct: 547 DAFRFSKEMLKKGI 560
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 176/382 (46%), Gaps = 4/382 (1%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
++ D N +++ C G + A + + M K P + LI G + + DK
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 479
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
I+ M +G +P+V++ +I LCK L A + DM G SP YN +I G
Sbjct: 480 DILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGC 539
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
KG +A F K+ L+KG L+TY LI+ + A ++L +++ +G PD+
Sbjct: 540 CSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDV 599
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
TYNSL+S G + + + G++P TY+ LI SL + +G++ +
Sbjct: 600 FTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTK---EGIELTERL 655
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
E S P + YN +L+ G +++A +L M+ +S D TYN+L+ G K G
Sbjct: 656 FGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGK 715
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSS 473
+ E L+ + P TYNI + G + SA Y EM KG + D +
Sbjct: 716 LCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNE 775
Query: 474 LAWGFCGVDQLEEAMELLKEMH 495
L G + +EA ++ EM+
Sbjct: 776 LVSGLKEEWRSKEAEIVISEMN 797
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 149/342 (43%)
Query: 204 LKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTV 263
+ A DL + G P + + ++ + F ++ + + L P Y
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 264 LIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRG 323
I+ + + LE+ M + YP + YN L+ K + + +L+R
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 324 MQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAI 383
+ P+ +TYNTLI G + V E M P+ +T+N +L GL K+G+++ A
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304
Query: 384 SLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGL 443
++ M PD T++ L G + + + + T +I ++ L
Sbjct: 305 NVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNAL 364
Query: 444 ARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKH 503
+ G +E A+E+ + KG+VP+E+ ++++ G+C L A ++ M K+ K H
Sbjct: 365 CKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDH 424
Query: 504 TAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALI 545
AY C+I C+ +++ A + ++ M P + Y+ LI
Sbjct: 425 LAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILI 466
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 89/209 (42%), Gaps = 2/209 (0%)
Query: 358 SSPPTRVTYNIMLNG--LCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVD 415
SSP + ++ +L L +S ++ A L+ + +E +P + LL L K
Sbjct: 102 SSPSLKHDFSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFR 161
Query: 416 EGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLA 475
I + + ++ P Y AI ++ + EL++ M I P ++ L
Sbjct: 162 VTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLI 221
Query: 476 WGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCK 535
G C ++ +A +L EM + Y +I G CK + + + + M +
Sbjct: 222 DGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIE 281
Query: 536 PDEKIYDALIKAVADSGMVKEANDLHQRL 564
P ++ L+K + +GMV++A ++ + +
Sbjct: 282 PSLITFNTLLKGLFKAGMVEDAENVLKEM 310
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 186/400 (46%), Gaps = 9/400 (2%)
Query: 87 DWGLESFERRESGELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMAR 146
D LE FE+ G+ D G +K D N ++ LC GRL A L+ M
Sbjct: 346 DEALEVFEKMR-GKRTDDGNVIKA------DSIHFNTLIDGLCKVGRLKEAEELLVRMKL 398
Query: 147 KSQ-IPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLK 205
+ + P+ + LI G + G+++ ++++ M P+V+T N ++GG+C+ L
Sbjct: 399 EERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLN 458
Query: 206 SAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLI 265
AV DM G + +TY T+I N +A+ +++ L GC P Y LI
Sbjct: 459 MAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALI 518
Query: 266 ELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQ 325
+C+ A+ V+E + G D++ YN L+ + E+ Y +++++ G +
Sbjct: 519 SGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKK 578
Query: 326 PNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISL 385
P+++TYNTLI H ++ V+ ++E M E PT TY +++ C G LD A+ L
Sbjct: 579 PDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKL 638
Query: 386 YSTM-VSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLA 444
+ M + P+ V YN L++ K G + + L + P + TYN L
Sbjct: 639 FKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLN 698
Query: 445 RMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQL 484
E+ +L EM+ + P++IT L G D+L
Sbjct: 699 EKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDEL 738
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 112/479 (23%), Positives = 204/479 (42%), Gaps = 15/479 (3%)
Query: 101 LVDPGKPVKPPPFVRNDGFTNNKILQNLCT----RGRLMAAARLIEIMARKSQ---IPHF 153
LVD V + F N+I ++ +GRL+ ++I +++R S P+
Sbjct: 200 LVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNS 259
Query: 154 PSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVED 213
T I L K + + I++ ++ + + N ++ L + + DLV
Sbjct: 260 VWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLK 319
Query: 214 MSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGC------PPYLITYTVLIEL 267
M PD +T +I + +EA+ ++ K I + LI+
Sbjct: 320 MDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDG 379
Query: 268 VCRYCGAIRALEVLEDMAMEG-CYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQP 326
+C+ A E+L M +E C P+ +TYN L+ + G E V+S + ++P
Sbjct: 380 LCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKP 439
Query: 327 NAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLY 386
N VT NT++ + H + M + VTY +++ C +++A+ Y
Sbjct: 440 NVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWY 499
Query: 387 STMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARM 446
M+ C PD Y L+SGLC+ + I+++ L S L+ YN+ I
Sbjct: 500 EKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDK 559
Query: 447 GSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAY 506
+ E E+ ++M +G PD IT+++L F E ++++M + T Y
Sbjct: 560 NNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTY 619
Query: 507 RCVILGLCKQRKVDIAIQAL-DLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
VI C ++D A++ D+ + S+ P+ IY+ LI A + G +A L + +
Sbjct: 620 GAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 117/460 (25%), Positives = 198/460 (43%), Gaps = 27/460 (5%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC-----KII 176
N ++ L G + A ++++ M +K + FP N I I + ++ KG KII
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESV--FPP--NRITADIVLHEVWKGRLLTEEKII 244
Query: 177 NIM--VMSGGV-PDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTII--- 230
++ S GV P+ + I LCK +A D++ D+ + +A +N ++
Sbjct: 245 ALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCL 304
Query: 231 -RGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGC 289
R M D N+ V D+++ P ++T +LI +C+ ALEV E M +
Sbjct: 305 GRNM-DISRMNDLV-LKMDEVK--IRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRT 360
Query: 290 ------YPDIITYNSLVSFTAKQG-VYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHG 342
D I +N+L+ K G + E L++ L PNAVTYN LI G
Sbjct: 361 DDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAG 420
Query: 343 YWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYN 402
+ +V+ M E P VT N ++ G+C+ L+ A+ + M E ++VTY
Sbjct: 421 KLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYM 480
Query: 403 TLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGK 462
TL+ C V++ + + CSP Y I GL ++ A + ++
Sbjct: 481 TLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEG 540
Query: 463 GIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIA 522
G D + ++ L FC + E+ E+L +M K+ +K Y +I K + +
Sbjct: 541 GFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESV 600
Query: 523 IQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQ 562
+ ++ M P Y A+I A G + EA L +
Sbjct: 601 ERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFK 640
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 153/319 (47%), Gaps = 19/319 (5%)
Query: 263 VLIELVCRYCGAIRALEVLEDMAM-EGCYP-DIITYNSLVSFTAKQGVYEETYLV--ISN 318
V+++++ R A +VL++M E +P + IT + ++ K + E ++ IS
Sbjct: 190 VVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALISR 249
Query: 319 LLSRGMQPNAVTYNTLIHSL----SSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLC 374
S G+ PN+V I SL ++ WD + D+++ +PP +N +L+ L
Sbjct: 250 FSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPP----FNALLSCLG 305
Query: 375 KSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLV 434
++ + R L M PD+VT L++ LCK VDE +++ + G G V
Sbjct: 306 RNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNV 365
Query: 435 T------YNIAIDGLARMGSMESAKELYSEM-IGKGIVPDEITHSSLAWGFCGVDQLEEA 487
+N IDGL ++G ++ A+EL M + + P+ +T++ L G+C +LE A
Sbjct: 366 IKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETA 425
Query: 488 MELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKA 547
E++ M + + K ++ G+C+ +++A+ M + K + Y LI A
Sbjct: 426 KEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHA 485
Query: 548 VADSGMVKEANDLHQRLIE 566
V++A +++++E
Sbjct: 486 CCSVSNVEKAMYWYEKMLE 504
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 200/421 (47%), Gaps = 14/421 (3%)
Query: 114 VRNDG-----FTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPS--CTNLIRGLIKI 166
+RN G T ++ +G + A ++E+M K+ F + C+ +I G KI
Sbjct: 125 LRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKI 184
Query: 167 GQIDKGCKIINIMVMSGG-VPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAIT 225
G+ + V SG VP+++T ++ LC+ G + DLV + G D +
Sbjct: 185 GKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVF 244
Query: 226 YNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMA 285
Y+ I G F G +A+ ++ + KG +++Y++LI+ + + AL +L M
Sbjct: 245 YSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMI 304
Query: 286 MEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWD 345
EG P++ITY +++ K G EE +++ + +LS G++ + Y TLI + G +
Sbjct: 305 KEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLN 364
Query: 346 GVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLL 405
+L M + P+ +TYN ++NGLC +G + A VS+ D++TY+TLL
Sbjct: 365 RAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA-----DEVSKGVVGDVITYSTLL 419
Query: 406 SGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIV 465
K +D +++ LV NI + MG+ A LY M +
Sbjct: 420 DSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLT 479
Query: 466 PDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQA 525
PD T++++ G+C Q+EEA+E+ E+ K Y +I LCK+ +D A +
Sbjct: 480 PDTATYATMIKGYCKTGQIEEALEMFNELRKSSVS-AAVCYNRIIDALCKKGMLDTATEV 538
Query: 526 L 526
L
Sbjct: 539 L 539
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/454 (25%), Positives = 194/454 (42%), Gaps = 52/454 (11%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N +L+ G A L M P + +I+G K GQI++ ++ N +
Sbjct: 451 NILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRK 510
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIR---------- 231
S V + N +I LCK+G L +A +++ ++ G D T T++
Sbjct: 511 SS-VSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKG 569
Query: 232 -----------------GMFD--------KGNFNEAVSFWKDQLRKGCPPYLITY--TVL 264
GM + +G+F A+ + RKG +T+ T+L
Sbjct: 570 ILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLT---VTFPSTIL 626
Query: 265 IELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGM 324
LV L V+ D+I Y +++ K+G + + S SRG+
Sbjct: 627 KTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGV 686
Query: 325 QPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAIS 384
N +TYN+LI+ L G + + + P+ VTY I+++ LCK GL A
Sbjct: 687 TLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEK 746
Query: 385 LYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLA 444
L +MVS+ P+I+ YN+++ G CK G ++ ++++ +P T + I G
Sbjct: 747 LLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYC 806
Query: 445 RMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIK-- 502
+ G ME A +++E K I D L GFC ++EEA LL+EM + +K
Sbjct: 807 KKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLI 866
Query: 503 ---------HTAYRCVILGLCKQRKVDIAIQALD 527
+ R ++ LC+Q +V AI+ LD
Sbjct: 867 NRVDAELAESESIRGFLVELCEQGRVPQAIKILD 900
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 125/489 (25%), Positives = 207/489 (42%), Gaps = 46/489 (9%)
Query: 124 ILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSG 183
++ L G + A L+ M ++ P+ + T +IRGL K+G++++ + N ++ G
Sbjct: 283 LIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVG 342
Query: 184 GVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAV 243
D +I G+C++G L A ++ DM G P +TYNT+I G+ G +EA
Sbjct: 343 IEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA- 401
Query: 244 SFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFT 303
D++ KG +ITY+ L++ + LE+ D++ N L+
Sbjct: 402 ----DEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAF 457
Query: 304 AKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE--TSSPP 361
G Y E + + + P+ TY T+I G +++ LE+ NE SS
Sbjct: 458 LLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQ---IEEALEMFNELRKSSVS 514
Query: 362 TRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGI-QL 420
V YN +++ LCK G+LD A + + + + DI T TLL + G D+GI L
Sbjct: 515 AAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANG-GDKGILGL 573
Query: 421 LYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVP-------------- 466
+Y L N L N AI L + GS E+A E+Y M KG+
Sbjct: 574 VYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNL 633
Query: 467 --------------------DEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAY 506
D I ++ + G C L +A+ L + + Y
Sbjct: 634 RSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITY 693
Query: 507 RCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
+I GLC+Q + A++ D + P E Y LI + G+ +A L ++
Sbjct: 694 NSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVS 753
Query: 567 WKILKTEII 575
++ II
Sbjct: 754 KGLVPNIII 762
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 119/523 (22%), Positives = 209/523 (39%), Gaps = 79/523 (15%)
Query: 105 GKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLI-EIMARKSQIPHFPSCTNLIRGL 163
GK +K V + T I++ LC G+L A L I++ ++ F T LI G+
Sbjct: 301 GKMIKEG--VEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVT-LIDGI 357
Query: 164 IKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDA 223
+ G +++ ++ M G P ++T N VI GLC G + A D G D
Sbjct: 358 CRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA-----DEVSKGVVGDV 412
Query: 224 ITYNTII-----------------------------------RGMFDKGNFNEAVSFWKD 248
ITY+T++ + G + EA + ++
Sbjct: 413 ITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRA 472
Query: 249 QLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGV 308
P TY +I+ C+ ALE+ ++ + + YN ++ K+G+
Sbjct: 473 MPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELR-KSSVSAAVCYNRIIDALCKKGM 531
Query: 309 YEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNI 368
+ V+ L +G+ + T TL+HS+ ++G G+ ++ + + +S N
Sbjct: 532 LDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLND 591
Query: 369 MLNGLCKSGLLDRAISLYSTMVSES---CFP----------------------------- 396
+ LCK G + AI +Y M + FP
Sbjct: 592 AILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLS 651
Query: 397 --DIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKE 454
D++ Y +++GLCKEGF+ + + L + +TYN I+GL + G + A
Sbjct: 652 SMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALR 711
Query: 455 LYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLC 514
L+ + G+VP E+T+ L C +A +LL M K Y ++ G C
Sbjct: 712 LFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYC 771
Query: 515 KQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
K + + A++ + + R PD ++IK G ++EA
Sbjct: 772 KLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEA 814
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 148/327 (45%), Gaps = 9/327 (2%)
Query: 247 KDQLRK-GCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGC-YP-DIITYNSLVSFT 303
+D LR G P +T+ LI A+EVLE M + YP D ++++S
Sbjct: 122 RDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGF 181
Query: 304 AKQGVYEETYLVISNLLSRG-MQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPT 362
K G E + + G + PN VTY TL+ +L G D V D++ + +
Sbjct: 182 CKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFD 241
Query: 363 RVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLY 422
V Y+ ++G K G L A+ MV + D+V+Y+ L+ GL KEG V+E + LL
Sbjct: 242 CVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLG 301
Query: 423 LLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVD 482
+ P L+TY I GL +MG +E A L++ ++ GI DE + +L G C
Sbjct: 302 KMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKG 361
Query: 483 QLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYD 542
L A +L +M ++ + Y VI GLC +V A + V D Y
Sbjct: 362 NLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADE-----VSKGVVGDVITYS 416
Query: 543 ALIKAVADSGMVKEANDLHQRLIEWKI 569
L+ + + ++ +R +E KI
Sbjct: 417 TLLDSYIKVQNIDAVLEIRRRFLEAKI 443
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 175/345 (50%)
Query: 218 GCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRA 277
G PD +T ++++ G + +AV + G ++ T+LI+ +C+ + A
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 278 LEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHS 337
LEVL+ M G P+++TY+SL++ K G + + + S+ + PN +T++ LI +
Sbjct: 68 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 127
Query: 338 LSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPD 397
+ G VD V ++M + S P TY+ ++ GLC +D AI + M+S+ C P+
Sbjct: 128 YAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPN 187
Query: 398 IVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYS 457
+VTY+TL +G K VD+GI+LL + + V+ N I G + G ++ A ++
Sbjct: 188 VVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFG 247
Query: 458 EMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQR 517
M G++P+ +++ + G ++E+A+ + M K + Y +I G+CK
Sbjct: 248 YMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKAC 307
Query: 518 KVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQ 562
V A + R +PD K Y +I + +GM EA+ L++
Sbjct: 308 MVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNR 352
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 142/299 (47%)
Query: 157 TNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSL 216
T LI L K + +++ M G P+V+T + +I GLCK G L A + +M
Sbjct: 52 TILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDS 111
Query: 217 SGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIR 276
+P+ IT++ +I +G ++ S +K ++ P + TY+ LI +C +
Sbjct: 112 KKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDE 171
Query: 277 ALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIH 336
A+++L+ M +GC P+++TY++L + K ++ ++ ++ RG+ N V+ NTLI
Sbjct: 172 AIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIK 231
Query: 337 SLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFP 396
G D V M P +YNI+L GL +G +++A+S + M
Sbjct: 232 GYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDL 291
Query: 397 DIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKEL 455
DI+TY ++ G+CK V E L Y L P Y I I L R G A L
Sbjct: 292 DIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADAL 350
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 151/335 (45%)
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN 238
M+ G PD++T + ++ G C +K AV + M G D + +I +
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 239 FNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNS 298
A+ K +G P ++TY+ LI +C+ A L +M + P++IT+++
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123
Query: 299 LVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETS 358
L+ AK+G + V ++ + PN TY++LI+ L H D +L++M
Sbjct: 124 LIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKG 183
Query: 359 SPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGI 418
P VTY+ + NG KS +D I L M + V+ NTL+ G + G +D +
Sbjct: 184 CTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLAL 243
Query: 419 QLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGF 478
+ +T P + +YNI + GL G +E A + M D IT++ + G
Sbjct: 244 GVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGM 303
Query: 479 CGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGL 513
C ++EA +L ++ K + AY +I L
Sbjct: 304 CKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAEL 338
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 149/317 (47%)
Query: 151 PHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDL 210
P + ++L+ G I + M G DV+ ++I LCK + A+++
Sbjct: 11 PDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEV 70
Query: 211 VEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCR 270
++ M G SP+ +TY+++I G+ G +A + K P +IT++ LI+ +
Sbjct: 71 LKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAK 130
Query: 271 YCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVT 330
+ V + M P++ TY+SL+ +E ++ ++S+G PN VT
Sbjct: 131 RGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVT 190
Query: 331 YNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMV 390
Y+TL + D +L+ M + V+ N ++ G ++G +D A+ ++ M
Sbjct: 191 YSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMT 250
Query: 391 SESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSME 450
S P+I +YN +L+GL G V++ + + T ++TY I I G+ + ++
Sbjct: 251 SNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVK 310
Query: 451 SAKELYSEMIGKGIVPD 467
A +L+ ++ K + PD
Sbjct: 311 EAYDLFYKLKFKRVEPD 327
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 130/298 (43%), Gaps = 35/298 (11%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T + ++ LC GRL A R + M K P+ + + LI K G++ K + +M
Sbjct: 85 TYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMM 144
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
+ P+V T + +I GLC + A+ +++ M GC+P+ +TY+T+ G F
Sbjct: 145 IQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRV 204
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
++ + ++L+DM G + ++ N+L
Sbjct: 205 DDGI-----------------------------------KLLDDMPQRGVAANTVSCNTL 229
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS 359
+ + G + V + S G+ PN +YN ++ L ++G + E M +T +
Sbjct: 230 IKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRN 289
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEG 417
+TY IM++G+CK+ ++ A L+ + + PD Y +++ L + G E
Sbjct: 290 DLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEA 347
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 97/194 (50%)
Query: 119 FTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINI 178
FT + ++ LC R+ A +++++M K P+ + + L G K ++D G K+++
Sbjct: 154 FTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDD 213
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN 238
M G + ++CN +I G + G + A+ + M+ +G P+ +YN ++ G+F G
Sbjct: 214 MPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGE 273
Query: 239 FNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNS 298
+A+S ++ + +ITYT++I +C+ C A ++ + + PD Y
Sbjct: 274 VEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTI 333
Query: 299 LVSFTAKQGVYEET 312
+++ + G+ E
Sbjct: 334 MIAELNRAGMRTEA 347
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%)
Query: 431 PGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMEL 490
P +VT + ++G S++ A + +M GI D + + L C + A+E+
Sbjct: 11 PDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEV 70
Query: 491 LKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVAD 550
LK M + Y +I GLCK ++ A + L M + P+ + ALI A A
Sbjct: 71 LKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAK 130
Query: 551 SGMVKEANDLHQRLIEWKI 569
G + + + +++ +I+ I
Sbjct: 131 RGKLSKVDSVYKMMIQMSI 149
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 164/353 (46%), Gaps = 9/353 (2%)
Query: 219 CSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRA- 277
C P Y T++ + ++ N A F+K+ G PP + + VLI+ +CR G + A
Sbjct: 117 CDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAG 176
Query: 278 LEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHS 337
L++ +M GC PD TY +L+S + G +E + + ++ + P VTY +LI+
Sbjct: 177 LKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLING 236
Query: 338 LSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPD 397
L D LE M P TY+ +++GLCK G +A+ L+ M++ C P+
Sbjct: 237 LCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPN 296
Query: 398 IVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYS 457
+VTY TL++GLCKE + E ++LL + P Y I G + A
Sbjct: 297 MVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLD 356
Query: 458 EMIGKGIVPDEI-------THSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVI 510
EMI GI P+ + T + + G C + A L M + ++ ++
Sbjct: 357 EMILGGITPNRLTWNIHVKTSNEVVRGLCA-NYPSRAFTLYLSMRSRGISVEVETLESLV 415
Query: 511 LGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQR 563
LCK+ + A+Q +D +V C P + + LI D +V EA+D R
Sbjct: 416 KCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASDTLLR 468
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 159/325 (48%), Gaps = 9/325 (2%)
Query: 124 ILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIK-IGQIDKGCKIINIMVMS 182
+L L +L A + + M P S LI+ L + G +D G KI M
Sbjct: 127 VLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKR 186
Query: 183 GGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEA 242
G PD T +I GLC+ G + A L +M C+P +TY ++I G+ N +EA
Sbjct: 187 GCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEA 246
Query: 243 VSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSF 302
+ + ++ KG P + TY+ L++ +C+ +++A+E+ E M GC P+++TY +L++
Sbjct: 247 MRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITG 306
Query: 303 TAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPT 362
K+ +E ++ + +G++P+A Y +I + + + L+ M P
Sbjct: 307 LCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPN 366
Query: 363 RVTYNI-------MLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVD 415
R+T+NI ++ GLC + RA +LY +M S ++ T +L+ LCK+G
Sbjct: 367 RLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQ 425
Query: 416 EGIQLLYLLTGTNCSPGLVTYNIAI 440
+ +QL+ + C P T+ + I
Sbjct: 426 KAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 120/241 (49%), Gaps = 1/241 (0%)
Query: 326 PNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKS-GLLDRAIS 384
P+ Y T++ L + + M E PPT + N+++ LC++ G +D +
Sbjct: 119 PSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLK 178
Query: 385 LYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLA 444
++ M C PD TY TL+SGLC+ G +DE +L + +C+P +VTY I+GL
Sbjct: 179 IFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLC 238
Query: 445 RMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHT 504
+++ A EM KGI P+ T+SSL G C + +AMEL + M + +
Sbjct: 239 GSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMV 298
Query: 505 AYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
Y +I GLCK++K+ A++ LD M KPD +Y +I +EA + +
Sbjct: 299 TYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEM 358
Query: 565 I 565
I
Sbjct: 359 I 359
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 135/284 (47%), Gaps = 5/284 (1%)
Query: 268 VCRYCGAIR----ALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRG 323
+CR G + +L V M C P Y ++++ ++ + N+ G
Sbjct: 92 ICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIG 151
Query: 324 MQPNAVTYNTLIHSL-SSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRA 382
+ P + N LI +L + G D + M + P TY +++GLC+ G +D A
Sbjct: 152 LPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEA 211
Query: 383 ISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDG 442
L++ MV + C P +VTY +L++GLC VDE ++ L + P + TY+ +DG
Sbjct: 212 KKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDG 271
Query: 443 LARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIK 502
L + G A EL+ M+ +G P+ +T+++L G C +++EA+ELL M+ + K
Sbjct: 272 LCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPD 331
Query: 503 HTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIK 546
Y VI G C K A LD M+ P+ ++ +K
Sbjct: 332 AGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVK 375
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/461 (26%), Positives = 217/461 (47%), Gaps = 12/461 (2%)
Query: 119 FTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINI 178
+T ++ L +GR A ++ + M + P+ + T LI GL + G D K+
Sbjct: 199 YTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYE 258
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN 238
M SG PD + N ++ G CK G + A +L+ G Y+++I G+F
Sbjct: 259 MQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARR 318
Query: 239 FNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNS 298
+ +A + + L+K P +I YT+LI+ + + AL++L M +G PD YN+
Sbjct: 319 YTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNA 378
Query: 299 LVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETS 358
++ +G+ EE + + P+A T+ LI S+ +G +++ + ++
Sbjct: 379 VIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSG 438
Query: 359 SPPTRVTYNIMLNGLCKSGLLDRAISLYSTM---VSESCFPDIV-TYNTLLSGLCKEGFV 414
P+ T+N +++GLCKSG L A L M S F + + N + + G +
Sbjct: 439 CSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSI 498
Query: 415 DEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSL 474
+ + L T SP +V+YN+ I+G R G ++ A +L + + KG+ PD +T+++L
Sbjct: 499 LKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTL 558
Query: 475 AWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQA-LDLMVRSR 533
G V + EEA +L K D + YR ++ C++RKV +A + + +
Sbjct: 559 INGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKIS 616
Query: 534 CKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKILKTEI 574
C DE + I+ G + A +RLIE K E+
Sbjct: 617 CLDDETANE--IEQCFKEGETERA---LRRLIELDTRKDEL 652
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 185/394 (46%), Gaps = 12/394 (3%)
Query: 175 IINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMF 234
+ N M+ P++ T +++ GL K+G A + +DM+ G SP+ +TY +I G+
Sbjct: 185 VYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLC 244
Query: 235 DKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDII 294
+G+ ++A + + G P + + L++ C+ + A E+L +G +
Sbjct: 245 QRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLR 304
Query: 295 TYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIM 354
Y+SL+ + Y + + + +N+L + ++P+ + Y LI LS G + +L M
Sbjct: 305 GYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSM 364
Query: 355 NETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFV 414
P YN ++ LC GLL+ SL M FPD T+ L+ +C+ G V
Sbjct: 365 PSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLV 424
Query: 415 DEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEM-IGK-GIVPDEITHS 472
E ++ + + CSP + T+N IDGL + G ++ A+ L +M +G+ + ++HS
Sbjct: 425 REAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHS 484
Query: 473 SLAWGFCGVDQLEEAMELLKEM----HKKD--EKIKHTAYRCVILGLCKQRKVDIAIQAL 526
G D + E+ +LK H D +Y +I G C+ +D A++ L
Sbjct: 485 ----GNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLL 540
Query: 527 DLMVRSRCKPDEKIYDALIKAVADSGMVKEANDL 560
+++ PD Y+ LI + G +EA L
Sbjct: 541 NVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKL 574
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 122/478 (25%), Positives = 217/478 (45%), Gaps = 50/478 (10%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D +N +L C GR++ A L+ + + + ++LI GL + + + ++
Sbjct: 267 DSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELY 326
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
M+ PD+I ++I GL K G ++ A+ L+ M G SPD YN +I+ + +
Sbjct: 327 ANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGR 386
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
G E S + P T+T+LI +CR A E+ ++ GC P + T+
Sbjct: 387 GLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATF 446
Query: 297 NSLVSFTAKQGVYEETYLVI--------SNLLSRGMQPNAVTYNTLIHSLS-SHGYWDGV 347
N+L+ K G +E L++ ++L R +++T++ S S Y D
Sbjct: 447 NALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRD-- 504
Query: 348 DDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSG 407
L +T S P V+YN+++NG C++G +D A+ L + + + PD VTYNTL++G
Sbjct: 505 ---LAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLING 561
Query: 408 LCKEGFVDEGIQLLYLLTGTNCSPG---------------LVTYNIAIDGLARMGSM--E 450
L + G +E +L Y SP LV +N+ + L ++ + E
Sbjct: 562 LHRVGREEEAFKLFYAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDE 621
Query: 451 SAKEL------------YSEMIGKGIVPDEIT---HSSLAWGFCGVDQLEEAMELLKEMH 495
+A E+ +I DE+T ++ G C + EA+ + +
Sbjct: 622 TANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLR 681
Query: 496 KKDEKIKHTAYRCV--ILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADS 551
+K KI T CV I GLCK+ ++D AI+ + + K ++ + L+ ++ +S
Sbjct: 682 EK--KILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFKLMPRVCNYLLSSLLES 737
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 164/385 (42%), Gaps = 37/385 (9%)
Query: 182 SGGVP-DVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMF-DKGNF 239
SGGV D ++I K G + AV+ M C PD TYN I+R M ++ F
Sbjct: 120 SGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFF 179
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
A + + + L+ C P L T+ +L M+G Y
Sbjct: 180 MLAFAVYNEMLKCNCSPNLYTFGIL---------------------MDGLY--------- 209
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS 359
K+G + + ++ RG+ PN VTY LI L G D + M + +
Sbjct: 210 -----KKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGN 264
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQ 419
P V +N +L+G CK G + A L + + Y++L+ GL + + +
Sbjct: 265 YPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFE 324
Query: 420 LLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFC 479
L + N P ++ Y I I GL++ G +E A +L S M KGI PD ++++ C
Sbjct: 325 LYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALC 384
Query: 480 GVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEK 539
G LEE L EM + + + +I +C+ V A + + +S C P
Sbjct: 385 GRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVA 444
Query: 540 IYDALIKAVADSGMVKEANDLHQRL 564
++ALI + SG +KEA L ++
Sbjct: 445 TFNALIDGLCKSGELKEARLLLHKM 469
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 139/307 (45%), Gaps = 1/307 (0%)
Query: 261 YTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLL 320
+ ++I+++ G + LE++ G D + L+S AK G+ E+ +
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 321 SRGMQPNAVTYNTLIH-SLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLL 379
+P+ TYN ++ + ++ V M + + P T+ I+++GL K G
Sbjct: 155 EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRT 214
Query: 380 DRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIA 439
A ++ M P+ VTY L+SGLC+ G D+ +L Y + + P V +N
Sbjct: 215 SDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNAL 274
Query: 440 IDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDE 499
+DG ++G M A EL G V +SSL G + +A EL M KK+
Sbjct: 275 LDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNI 334
Query: 500 KIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEAND 559
K Y +I GL K K++ A++ L M PD Y+A+IKA+ G+++E
Sbjct: 335 KPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRS 394
Query: 560 LHQRLIE 566
L + E
Sbjct: 395 LQLEMSE 401
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 146/360 (40%), Gaps = 47/360 (13%)
Query: 104 PGKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGL 163
P K + P D + N +++ LC RG L L M+ P + T LI +
Sbjct: 365 PSKGISP------DTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSM 418
Query: 164 IKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDA 223
+ G + + +I + SG P V T N +I GLCK G LK A L+ M + P +
Sbjct: 419 CRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVG--RPAS 476
Query: 224 I------TYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRA 277
+ + N M + G+ +A G P +++Y VLI CR A
Sbjct: 477 LFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGA 536
Query: 278 LEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETY-------------LVISNLLSRGM 324
L++L + ++G PD +TYN+L++ + G EE + V +L++
Sbjct: 537 LKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYRSLMTWSC 596
Query: 325 QPNA--VTYNTLIHSLSSHGYWDG--------------VDDVLEIMNETSSPPTRVT--- 365
+ V +N + L D + L + E + +T
Sbjct: 597 RKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGP 656
Query: 366 YNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQ-LLYLL 424
Y I L GLC+SG A+ ++S + + + L+ GLCK +D I+ LY L
Sbjct: 657 YTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTL 716
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 120/323 (37%), Gaps = 48/323 (14%)
Query: 91 ESFERRESGELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQI 150
+S E +E+ L+ + +P + N+ + G ++ A R + A
Sbjct: 455 KSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSS 514
Query: 151 PHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDL 210
P S LI G + G ID K++N++ + G PD +T N +I GL + G + A L
Sbjct: 515 PDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKL 574
Query: 211 VEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCR 270
+ K +F + + ++ + C + V L +
Sbjct: 575 ----------------------FYAKDDFRHSPAVYRSLMTWSCRKRKV--LVAFNLWMK 610
Query: 271 YCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVT 330
Y I L+ +E C+ K+G E + L +R +
Sbjct: 611 YLKKISCLDDETANEIEQCF--------------KEGETERALRRLIELDTRKDELTLGP 656
Query: 331 YNTLIHSLSSHGYWDGVDDVLEIMNETS---SPPTRVTYNIMLNGLCKSGLLDRAIS--L 385
Y + L G + V ++ E +PP+ V +++GLCK LD AI L
Sbjct: 657 YTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVK---LIHGLCKREQLDAAIEVFL 713
Query: 386 YSTMVSESCFPDIVTYNTLLSGL 408
Y+ + P + Y LLS L
Sbjct: 714 YTLDNNFKLMPRVCNY--LLSSL 734
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 181/384 (47%), Gaps = 6/384 (1%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
+R D + LC G L A ++ + S +++I G K+G+ ++
Sbjct: 302 IRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAI 361
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
K+I+ + P++ + + +C G + A + +++ G PD + Y T+I G
Sbjct: 362 KLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGY 418
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
+ G ++A ++ L+ G PP L T T+LI R+ A V +M EG D+
Sbjct: 419 CNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDV 478
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
+TYN+L+ K + + +I + S G+ P+ TYN LIHS+ GY D ++++
Sbjct: 479 VTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISE 538
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
+ P+ + + ++ G K G A L+ M PD+VT + LL G CK
Sbjct: 539 LIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQR 598
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSS 473
+++ I L L P +V YN I G +G +E A EL M+ +G++P+E TH +
Sbjct: 599 MEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHA 658
Query: 474 LAWGFCG---VDQLEEAMELLKEM 494
L G G V+ A LL+E+
Sbjct: 659 LVLGLEGKRFVNSETHASMLLEEI 682
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 190/424 (44%), Gaps = 21/424 (4%)
Query: 123 KILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMS 182
+ ++++ +RGR + AA L + IR G DKG +++ M
Sbjct: 257 EFVEHMLSRGRHLNAAVL----------------SLFIRKYCSDGYFDKGWELLMGMKHY 300
Query: 183 GGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEA 242
G PD++ + I LCK G+LK A ++ + L G S D+++ +++I G G EA
Sbjct: 301 GIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEA 360
Query: 243 VSFWKD-QLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVS 301
+ +LR P + Y+ + +C +RA + +++ G PD + Y +++
Sbjct: 361 IKLIHSFRLR----PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMID 416
Query: 302 FTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPP 361
G ++ + LL G P+ T LI + S G + V M
Sbjct: 417 GYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKL 476
Query: 362 TRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLL 421
VTYN +++G K+ L++ L M S PD+ TYN L+ + G++DE +++
Sbjct: 477 DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536
Query: 422 YLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGV 481
L P + + I G ++ G + A L+ M + PD +T S+L G+C
Sbjct: 537 SELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKA 596
Query: 482 DQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIY 541
++E+A+ L ++ K Y +I G C ++ A + + LMV+ P+E +
Sbjct: 597 QRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTH 656
Query: 542 DALI 545
AL+
Sbjct: 657 HALV 660
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/452 (23%), Positives = 190/452 (42%), Gaps = 42/452 (9%)
Query: 159 LIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSG 218
LI I+ +++ K+ + G P C ++ + + L+ A + VE M G
Sbjct: 207 LIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRG 266
Query: 219 CSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRAL 278
+A + IR G F++ G P ++ +TV I+ +C+ A
Sbjct: 267 RHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEAT 326
Query: 279 EVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSL 338
VL + + G D ++ +S++ K G EE +I + ++PN Y++ + ++
Sbjct: 327 SVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF---RLRPNIFVYSSFLSNI 383
Query: 339 SSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAI--------------- 383
S G + + + E P V Y M++G C G D+A
Sbjct: 384 CSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSL 443
Query: 384 --------------------SLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYL 423
S++ M +E D+VTYN L+ G K +++ +L+
Sbjct: 444 TTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDE 503
Query: 424 LTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQ 483
+ SP + TYNI I + G ++ A E+ SE+I +G VP + + + GF
Sbjct: 504 MRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGD 563
Query: 484 LEEAMELLKEMHKKDEKIKHTAYRCVIL--GLCKQRKVDIAIQALDLMVRSRCKPDEKIY 541
+EA L M D ++K C L G CK ++++ AI + ++ + KPD +Y
Sbjct: 564 FQEAFILWFYM--ADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLY 621
Query: 542 DALIKAVADSGMVKEANDLHQRLIEWKILKTE 573
+ LI G +++A +L +++ +L E
Sbjct: 622 NTLIHGYCSVGDIEKACELIGLMVQRGMLPNE 653
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 181/384 (47%), Gaps = 6/384 (1%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
+R D + LC G L A ++ + S +++I G K+G+ ++
Sbjct: 302 IRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAI 361
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
K+I+ + P++ + + +C G + A + +++ G PD + Y T+I G
Sbjct: 362 KLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGY 418
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
+ G ++A ++ L+ G PP L T T+LI R+ A V +M EG D+
Sbjct: 419 CNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDV 478
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
+TYN+L+ K + + +I + S G+ P+ TYN LIHS+ GY D ++++
Sbjct: 479 VTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISE 538
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
+ P+ + + ++ G K G A L+ M PD+VT + LL G CK
Sbjct: 539 LIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQR 598
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSS 473
+++ I L L P +V YN I G +G +E A EL M+ +G++P+E TH +
Sbjct: 599 MEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHA 658
Query: 474 LAWGFCG---VDQLEEAMELLKEM 494
L G G V+ A LL+E+
Sbjct: 659 LVLGLEGKRFVNSETHASMLLEEI 682
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 190/424 (44%), Gaps = 21/424 (4%)
Query: 123 KILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMS 182
+ ++++ +RGR + AA L + IR G DKG +++ M
Sbjct: 257 EFVEHMLSRGRHLNAAVL----------------SLFIRKYCSDGYFDKGWELLMGMKHY 300
Query: 183 GGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEA 242
G PD++ + I LCK G+LK A ++ + L G S D+++ +++I G G EA
Sbjct: 301 GIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEA 360
Query: 243 VSFWKD-QLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVS 301
+ +LR P + Y+ + +C +RA + +++ G PD + Y +++
Sbjct: 361 IKLIHSFRLR----PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMID 416
Query: 302 FTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPP 361
G ++ + LL G P+ T LI + S G + V M
Sbjct: 417 GYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKL 476
Query: 362 TRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLL 421
VTYN +++G K+ L++ L M S PD+ TYN L+ + G++DE +++
Sbjct: 477 DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536
Query: 422 YLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGV 481
L P + + I G ++ G + A L+ M + PD +T S+L G+C
Sbjct: 537 SELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKA 596
Query: 482 DQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIY 541
++E+A+ L ++ K Y +I G C ++ A + + LMV+ P+E +
Sbjct: 597 QRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTH 656
Query: 542 DALI 545
AL+
Sbjct: 657 HALV 660
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/452 (23%), Positives = 190/452 (42%), Gaps = 42/452 (9%)
Query: 159 LIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSG 218
LI I+ +++ K+ + G P C ++ + + L+ A + VE M G
Sbjct: 207 LIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRG 266
Query: 219 CSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRAL 278
+A + IR G F++ G P ++ +TV I+ +C+ A
Sbjct: 267 RHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEAT 326
Query: 279 EVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSL 338
VL + + G D ++ +S++ K G EE +I + ++PN Y++ + ++
Sbjct: 327 SVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF---RLRPNIFVYSSFLSNI 383
Query: 339 SSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAI--------------- 383
S G + + + E P V Y M++G C G D+A
Sbjct: 384 CSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSL 443
Query: 384 --------------------SLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYL 423
S++ M +E D+VTYN L+ G K +++ +L+
Sbjct: 444 TTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDE 503
Query: 424 LTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQ 483
+ SP + TYNI I + G ++ A E+ SE+I +G VP + + + GF
Sbjct: 504 MRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGD 563
Query: 484 LEEAMELLKEMHKKDEKIKHTAYRCVIL--GLCKQRKVDIAIQALDLMVRSRCKPDEKIY 541
+EA L M D ++K C L G CK ++++ AI + ++ + KPD +Y
Sbjct: 564 FQEAFILWFYM--ADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLY 621
Query: 542 DALIKAVADSGMVKEANDLHQRLIEWKILKTE 573
+ LI G +++A +L +++ +L E
Sbjct: 622 NTLIHGYCSVGDIEKACELIGLMVQRGMLPNE 653
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 205/452 (45%), Gaps = 5/452 (1%)
Query: 124 ILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSG 183
IL L R R + ++M + +P L + K G K K+++ M G
Sbjct: 170 ILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLG 229
Query: 184 GVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAV 243
P+V + I LC+ ++ A + E M G P+ TY+ +I G GN +A
Sbjct: 230 IKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAY 289
Query: 244 SFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFT 303
+K+ L P ++ + L++ C+ + A + M G P++ YN L+
Sbjct: 290 GLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGH 349
Query: 304 AKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTR 363
K G E ++S + S + P+ TY LI+ L + + + M P+
Sbjct: 350 CKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSS 409
Query: 364 VTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYL 423
TYN +++G CK +++A+ L S M + P+I+T++TL+ G C + + L +
Sbjct: 410 ATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFE 469
Query: 424 LTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQ 483
+T P +VTY ID + +M+ A LYS+M+ GI P++ T + L GF +
Sbjct: 470 MTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGR 529
Query: 484 LEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDA 543
L A++ +E +++ H + C+I GLC+ + A + M PD Y +
Sbjct: 530 LSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVS 589
Query: 544 LIKAVADSGMVKEANDLHQRLIEWKILKTEII 575
++K G ++E +++ ++KT I+
Sbjct: 590 MLK-----GHLQEKRITDTMMLQCDMIKTGIL 616
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 188/408 (46%)
Query: 151 PHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDL 210
P +C +++ GL++ + D +M+ G VPDV ++ K+G L
Sbjct: 162 PDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKL 221
Query: 211 VEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCR 270
+++M+ G P+ Y I + EA ++ + G P L TY+ +I+ C+
Sbjct: 222 LDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCK 281
Query: 271 YCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVT 330
+A + +++ + P+++ + +LV K + +++ G+ PN
Sbjct: 282 TGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYV 341
Query: 331 YNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMV 390
YN LIH G +L M + P TY I++NGLC + A L+ M
Sbjct: 342 YNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMK 401
Query: 391 SESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSME 450
+E FP TYN+L+ G CKE +++ + L +T + P ++T++ IDG + ++
Sbjct: 402 NERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIK 461
Query: 451 SAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVI 510
+A LY EM KGIVPD +T+++L ++EA+ L +M + + C++
Sbjct: 462 AAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLV 521
Query: 511 LGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEAN 558
G K+ ++ +AI + R + + LI+ + +G + A+
Sbjct: 522 DGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRAS 569
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 176/404 (43%), Gaps = 3/404 (0%)
Query: 159 LIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSG 218
LI +++G ++ + M S PD C ++ GL +R S + M G
Sbjct: 138 LIMEFLEMGLFEEALWVSREMKCS---PDSKACLSILNGLVRRRRFDSVWVDYQLMISRG 194
Query: 219 CSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRAL 278
PD Y + + F +G +++ + G P + YT+ I +CR A
Sbjct: 195 LVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAE 254
Query: 279 EVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSL 338
++ E M G P++ TY++++ K G + Y + +L + PN V + TL+
Sbjct: 255 KMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGF 314
Query: 339 SSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDI 398
+ M + P YN +++G CKSG + A+ L S M S + PD+
Sbjct: 315 CKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDV 374
Query: 399 VTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSE 458
TY L++GLC E V E +L + P TYN I G + +ME A +L SE
Sbjct: 375 FTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSE 434
Query: 459 MIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRK 518
M G+ P+ IT S+L G+C V ++ AM L EM K Y +I K+
Sbjct: 435 MTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEAN 494
Query: 519 VDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQ 562
+ A++ M+ + P++ + L+ G + A D +Q
Sbjct: 495 MKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQ 538
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 154/345 (44%), Gaps = 19/345 (5%)
Query: 225 TYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLED- 283
++ +I + G F EA+ W + K P ++L LV R R V D
Sbjct: 134 VFSLLIMEFLEMGLFEEAL--WVSREMKCSPDSKACLSILNGLVRRR----RFDSVWVDY 187
Query: 284 --MAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSH 341
M G PD+ Y L KQG+Y + ++ + S G++PN Y I L
Sbjct: 188 QLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRD 247
Query: 342 GYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTY 401
+ + + E+M + P TY+ M++G CK+G + +A LY ++ P++V +
Sbjct: 248 NKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVF 307
Query: 402 NTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIG 461
TL+ G CK + L + P L YN I G + G+M A L SEM
Sbjct: 308 GTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMES 367
Query: 462 KGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKI--KHTAYRCVILGLCKQRKV 519
+ PD T++ L G C DQ+ EA L ++M K+E+I Y +I G CK+ +
Sbjct: 368 LNLSPDVFTYTILINGLCIEDQVAEANRLFQKM--KNERIFPSSATYNSLIHGYCKEYNM 425
Query: 520 DIAIQALDL---MVRSRCKPDEKIYDALIKAVADSGMVKEANDLH 561
+ QALDL M S +P+ + LI + +K A L+
Sbjct: 426 E---QALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLY 467
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 146/329 (44%)
Query: 124 ILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSG 183
++ C L+ A L M + P+ LI G K G + + +++ M
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369
Query: 184 GVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAV 243
PDV T ++I GLC + A L + M P + TYN++I G + N +A+
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQAL 429
Query: 244 SFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFT 303
+ G P +IT++ LI+ C A+ + +M ++G PD++TY +L+
Sbjct: 430 DLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAH 489
Query: 304 AKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTR 363
K+ +E + S++L G+ PN T+ L+ G D + N+ S
Sbjct: 490 FKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNH 549
Query: 364 VTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYL 423
V + ++ GLC++G + RA +S M S PDI +Y ++L G +E + + + L
Sbjct: 550 VGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCD 609
Query: 424 LTGTNCSPGLVTYNIAIDGLARMGSMESA 452
+ T P L+ + G ++SA
Sbjct: 610 MIKTGILPNLLVNQLLARFYQANGYVKSA 638
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 111/262 (42%), Gaps = 35/262 (13%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D FT ++ LC ++ A RL + M + P + +LI G K +++ +
Sbjct: 373 DVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLC 432
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
+ M SG P++IT + +I G C +K+A+ L +M++ G PD +TY +I F +
Sbjct: 433 SEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKE 492
Query: 237 GNFNEAVSFWKDQLRKGCPP-----------------------------------YLITY 261
N EA+ + D L G P + +
Sbjct: 493 ANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGF 552
Query: 262 TVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLS 321
T LIE +C+ +RA DM G PDI +Y S++ ++ +T ++ +++
Sbjct: 553 TCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIK 612
Query: 322 RGMQPNAVTYNTLIHSLSSHGY 343
G+ PN + L ++GY
Sbjct: 613 TGILPNLLVNQLLARFYQANGY 634
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 184/411 (44%), Gaps = 38/411 (9%)
Query: 150 IPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVD 209
P + + LI K+G+ D ++ + M + P ++G K G ++ A+D
Sbjct: 230 FPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALD 289
Query: 210 LVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVC 269
L E+M +GCSP TY +I+G+ G +EA F+KD LR G P ++ L+ ++
Sbjct: 290 LFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILG 349
Query: 270 RYCGAIRALEVLEDMAMEGCYPDIITYNSLVS--FTAKQGV------------------- 308
+ V +M M C P +++YN+++ F +K V
Sbjct: 350 KVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSE 409
Query: 309 ---------------YEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
E+ L++ + +G P Y +LI++L ++ +++ +
Sbjct: 410 FTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKE 469
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
+ E + Y +M+ K G L A+ L++ M ++ PD+ YN L+SG+ K G
Sbjct: 470 LKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGM 529
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSS 473
++E LL + C + ++NI ++G AR G A E++ + GI PD +T+++
Sbjct: 530 INEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNT 589
Query: 474 LAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVI--LGLCKQRKVDIA 522
L F EEA +++EM K + Y ++ +G K D++
Sbjct: 590 LLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVDHEKDDVS 640
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 192/416 (46%), Gaps = 2/416 (0%)
Query: 151 PHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGG-VPDVITCNMVIGGLCKRGYLKSAVD 209
P + ++I L++ GQ +K ++ M G PD IT + +I K G SA+
Sbjct: 195 PTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIR 254
Query: 210 LVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVC 269
L ++M + P Y T++ F G +A+ +++ R GC P + TYT LI+ +
Sbjct: 255 LFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLG 314
Query: 270 RYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAV 329
+ A +DM +G PD++ N+L++ K G EE V S + P V
Sbjct: 315 KAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVV 374
Query: 330 TYNTLIHSL-SSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYST 388
+YNT+I +L S + V + M S P+ TY+I+++G CK+ +++A+ L
Sbjct: 375 SYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEE 434
Query: 389 MVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGS 448
M + P Y +L++ L K + +L L + Y + I + G
Sbjct: 435 MDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGK 494
Query: 449 MESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRC 508
+ A +L++EM +G PD +++L G + EA LL++M + + ++
Sbjct: 495 LSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNI 554
Query: 509 VILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
++ G + AI+ + + S KPD Y+ L+ A +GM +EA + + +
Sbjct: 555 ILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREM 610
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 107/436 (24%), Positives = 194/436 (44%), Gaps = 17/436 (3%)
Query: 139 RLIEIMARKSQIPHFPSC-TNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGG 197
R I+ + R + + P+ + L++ L + + K + P T N VI
Sbjct: 147 RTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILM 206
Query: 198 LCKRGYLKSAVDLVEDMSLSG-CSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGC-P 255
L + G + ++ +M G C PD ITY+ +I G + A+ + D+++ C
Sbjct: 207 LMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLF-DEMKDNCMQ 265
Query: 256 PYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLV 315
P YT L+ + + +AL++ E+M GC P + TY L+ K G +E Y
Sbjct: 266 PTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGF 325
Query: 316 ISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCK 375
++L G+ P+ V N L++ L G + + +V M PT V+YN ++ L +
Sbjct: 326 YKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFE 385
Query: 376 S-GLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLV 434
S + S + M ++S P TY+ L+ G CK V++ + LL + P
Sbjct: 386 SKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPA 445
Query: 435 TYNIAIDGLARMGSMESAKELYSEM------IGKGIVPDEITHSSLAWGFCGVDQLEEAM 488
Y I+ L + E+A EL+ E+ + + I H +G CG +L EA+
Sbjct: 446 AYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKH----FGKCG--KLSEAV 499
Query: 489 ELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAV 548
+L EM + AY ++ G+ K ++ A L M + C+ D ++ ++
Sbjct: 500 DLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGF 559
Query: 549 ADSGMVKEANDLHQRL 564
A +G+ + A ++ + +
Sbjct: 560 ARTGVPRRAIEMFETI 575
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 117/254 (46%), Gaps = 4/254 (1%)
Query: 322 RGMQPNAVTYNTLIHSLS-SHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLD 380
R Q + TY TLI L + Y + + E++ T + + ++ L ++ ++
Sbjct: 120 RNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVS 179
Query: 381 RAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLY--LLTGTNCSPGLVTYNI 438
+A+S++ C P TYN+++ L +EG E + +Y + +C P +TY+
Sbjct: 180 KALSVFYQAKGRKCKPTSSTYNSVILMLMQEG-QHEKVHEVYTEMCNEGDCFPDTITYSA 238
Query: 439 AIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKD 498
I ++G +SA L+ EM + P E +++L + V ++E+A++L +EM +
Sbjct: 239 LISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAG 298
Query: 499 EKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEAN 558
Y +I GL K +VD A M+R PD + L+ + G V+E
Sbjct: 299 CSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELT 358
Query: 559 DLHQRLIEWKILKT 572
++ + W+ T
Sbjct: 359 NVFSEMGMWRCTPT 372
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/451 (24%), Positives = 204/451 (45%), Gaps = 3/451 (0%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHF-PSCTNLIRGLIKIGQIDKGCKI 175
DG + +Q C L+ A L+ M K +P + T++I +K G +++ ++
Sbjct: 273 DGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRV 332
Query: 176 INIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFD 235
++ MV G VI ++ G CK L A+DL M G +PD + ++ ++
Sbjct: 333 MDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCK 392
Query: 236 KGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIIT 295
+A+ F+ P + +I+ + ALE+ D + E
Sbjct: 393 NMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFND-SFESWIAHGFM 451
Query: 296 YNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMN 355
N + KQG + + + +G++PN V YN ++ + D + M
Sbjct: 452 CNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEML 511
Query: 356 ETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVD 415
E P TY+I+++G K+ A + + M + + + V YNT+++GLCK G
Sbjct: 512 EKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTS 571
Query: 416 EGIQLLY-LLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSL 474
+ ++L L+ S +YN IDG ++G +SA E Y EM G P+ +T +SL
Sbjct: 572 KAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSL 631
Query: 475 AWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRC 534
GFC ++++ A+E+ EM + K+ AY +I G CK+ + A +
Sbjct: 632 INGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGL 691
Query: 535 KPDEKIYDALIKAVADSGMVKEANDLHQRLI 565
P+ +Y++LI + G + A DL+++++
Sbjct: 692 MPNVSVYNSLISGFRNLGKMDAAIDLYKKMV 722
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 194/432 (44%), Gaps = 42/432 (9%)
Query: 118 GFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIIN 177
GF NKI C +G++ AA +++M +K P+ N++ ++ +D I +
Sbjct: 449 GFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFS 508
Query: 178 IMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKG 237
M+ G P+ T +++I G K ++A D++ M+ S + + YNTII G+
Sbjct: 509 EMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGL---- 564
Query: 238 NFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYP-DIITY 296
C+ +A E+L+++ E Y +Y
Sbjct: 565 -------------------------------CKVGQTSKAKEMLQNLIKEKRYSMSCTSY 593
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
NS++ K G + + G PN VT+ +LI+ + +D LE+ +E
Sbjct: 594 NSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKS---NRMDLALEMTHE 650
Query: 357 TSSPPTRV---TYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
S ++ Y +++G CK + A +L+S + P++ YN+L+SG G
Sbjct: 651 MKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGK 710
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSS 473
+D I L + S L TY IDGL + G++ A +LYSE++ GIVPDEI H
Sbjct: 711 MDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMV 770
Query: 474 LAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSR 533
L G Q +A ++L+EM KKD Y VI G ++ ++ A + D M+
Sbjct: 771 LVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKG 830
Query: 534 CKPDEKIYDALI 545
D+ +++ L+
Sbjct: 831 IVHDDTVFNLLV 842
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/457 (22%), Positives = 198/457 (43%), Gaps = 2/457 (0%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T ++ G + A R+++ M + T+L+ G K ++ K + N M
Sbjct: 312 TYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRM 371
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
G PD + ++++ CK ++ A++ M +P ++ +T+I+G +
Sbjct: 372 EEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESP 431
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
A+ + D + + + L C+ A L+ M +G P+++ YN++
Sbjct: 432 EAALEIFNDSFESWIAHGFMCNKIFL-LFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNM 490
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS 359
+ + + + S +L +G++PN TY+ LI + DV+ MN ++
Sbjct: 491 MLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNF 550
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFP-DIVTYNTLLSGLCKEGFVDEGI 418
V YN ++NGLCK G +A + ++ E + +YN+++ G K G D +
Sbjct: 551 EANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAV 610
Query: 419 QLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGF 478
+ ++ SP +VT+ I+G + M+ A E+ EM + D + +L GF
Sbjct: 611 ETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGF 670
Query: 479 CGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDE 538
C + ++ A L E+ + + Y +I G K+D AI MV D
Sbjct: 671 CKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDL 730
Query: 539 KIYDALIKAVADSGMVKEANDLHQRLIEWKILKTEII 575
Y +I + G + A+DL+ L++ I+ EI+
Sbjct: 731 FTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEIL 767
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 181/428 (42%), Gaps = 40/428 (9%)
Query: 159 LIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSG 218
L+ I+ ++D +MV VP V N V+ L + + A ++ M L G
Sbjct: 175 LLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIG 234
Query: 219 CSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRAL 278
+ D +T ++R + EAV ++ + +G P + +++ ++ C+ + AL
Sbjct: 235 VAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMAL 294
Query: 279 EVLEDMAME-GCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHS 337
++L +M + G TY S++ K+G EE V+ ++ G+ + + +L++
Sbjct: 295 DLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNG 354
Query: 338 LSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPD 397
D+ M E P +V +++M+ CK+ +++AI Y M S P
Sbjct: 355 YCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPS 414
Query: 398 IVTYNTLLSG----------------------------------LCKEGFVDEGIQLLYL 423
V +T++ G CK+G VD L +
Sbjct: 415 SVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKM 474
Query: 424 LTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQ 483
+ P +V YN + RM +M+ A+ ++SEM+ KG+ P+ T+S L GF
Sbjct: 475 MEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKD 534
Query: 484 LEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSR-----CKPDE 538
+ A +++ +M+ + + Y +I GLCK + A + L +++ + C
Sbjct: 535 EQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYN 594
Query: 539 KIYDALIK 546
I D +K
Sbjct: 595 SIIDGFVK 602
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 1/170 (0%)
Query: 362 TRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLL 421
T +N +LN ++ +D A+ + MV P + N +LS L + +DE ++
Sbjct: 168 TPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIY 227
Query: 422 YLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGV 481
+ + VT + + R E A +++ ++ +G PD + S C
Sbjct: 228 NKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKT 287
Query: 482 DQLEEAMELLKEMHKK-DEKIKHTAYRCVILGLCKQRKVDIAIQALDLMV 530
L A++LL+EM K Y VI+ K+ ++ A++ +D MV
Sbjct: 288 PDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMV 337
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/464 (22%), Positives = 206/464 (44%), Gaps = 35/464 (7%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T N +L R A +++ M P + +LI + G +D+ ++
Sbjct: 313 DKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELK 372
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
N M G PDV T ++ G + G ++SA+ + E+M +GC P+ T+N I+ ++
Sbjct: 373 NQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNR 432
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
G F E + + + G P ++T+ L+ + + V ++M G P+ T+
Sbjct: 433 GKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETF 492
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
N+L+S ++ G +E+ V +L G+ P+ TYNT++ +L+ G W+ + VL M +
Sbjct: 493 NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED 552
Query: 357 TSSPPTRVTYNIMLNGLCK---------------SGLLDRAISLYSTMV----------- 390
P +TY +L+ SG+++ L T+V
Sbjct: 553 GRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPE 612
Query: 391 SESCF---------PDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAID 441
+E F PDI T N+++S + V + +L + +P + TYN +
Sbjct: 613 AERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMY 672
Query: 442 GLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKI 501
+R ++E+ E++ KGI PD I+++++ + +C ++ +A + EM
Sbjct: 673 MHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVP 732
Query: 502 KHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALI 545
Y I + AI + M++ C+P++ Y++++
Sbjct: 733 DVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 190/424 (44%), Gaps = 7/424 (1%)
Query: 159 LIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSG 218
+I L K G++ + N + G DV + +I G + AV++ + M G
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 219 CSPDAITYNTIIRGMFDKGN-FNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRA 277
C P ITYN I+ G +N+ S + G P TY LI R A
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298
Query: 278 LEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHS 337
+V E+M G D +TYN+L+ K +E V++ ++ G P+ VTYN+LI +
Sbjct: 299 AQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 358
Query: 338 LSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPD 397
+ G D ++ M E + P TY +L+G ++G ++ A+S++ M + C P+
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN 418
Query: 398 IVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYS 457
I T+N + G E +++ + SP +VT+N + + G ++
Sbjct: 419 ICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFK 478
Query: 458 EMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQR 517
EM G VP+ T ++L + E+AM + + M + Y V+ L +
Sbjct: 479 EMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGG 538
Query: 518 KVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSG----MVKEANDLHQRLIEWK--ILK 571
+ + + L M RCKP+E Y +L+ A A+ M A +++ +IE + +LK
Sbjct: 539 MWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLK 598
Query: 572 TEII 575
T ++
Sbjct: 599 TLVL 602
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 177/371 (47%), Gaps = 11/371 (2%)
Query: 193 MVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRK 252
++I L K G + SA ++ + G S D +Y ++I + G + EAV+ +K
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEED 237
Query: 253 GCPPYLITYTVLIELVCRYCGAIRAL-EVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEE 311
GC P LITY V++ + + + ++E M +G PD TYN+L++ + +++E
Sbjct: 238 GCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQE 297
Query: 312 TYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE---TSSPPTRVTYNI 368
V + + G + VTYN L L +G + ++++NE P+ VTYN
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNAL---LDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNS 354
Query: 369 MLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTN 428
+++ + G+LD A+ L + M + PD+ TY TLLSG + G V+ + + +
Sbjct: 355 LISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG 414
Query: 429 CSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSL--AWGFCGVDQLEE 486
C P + T+N I G +++ E+ G+ PD +T ++L +G G+D E
Sbjct: 415 CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS--E 472
Query: 487 AMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIK 546
+ KEM + + + +I + + A+ M+ + PD Y+ ++
Sbjct: 473 VSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLA 532
Query: 547 AVADSGMVKEA 557
A+A GM +++
Sbjct: 533 ALARGGMWEQS 543
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/439 (23%), Positives = 188/439 (42%), Gaps = 37/439 (8%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T N ++ G L A L MA K P + T L+ G + G+++ I M
Sbjct: 351 TYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM 410
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
+G P++ T N I RG + + +++++ G SPD +T+NT++ G
Sbjct: 411 RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMD 470
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAI-RALEVLEDMAMEGCYPDIITYNS 298
+E +K+ R G P T+ LI R CG+ +A+ V M G PD+ TYN+
Sbjct: 471 SEVSGVFKEMKRAGFVPERETFNTLISAYSR-CGSFEQAMTVYRRMLDAGVTPDLSTYNT 529
Query: 299 LVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLS-----------SHGYWDGV 347
+++ A+ G++E++ V++ + +PN +TY +L+H+ + + + GV
Sbjct: 530 VLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGV 589
Query: 348 ------------------------DDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAI 383
+ + E P T N M++ + ++ +A
Sbjct: 590 IEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKAN 649
Query: 384 SLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGL 443
+ M P + TYN+L+ + + ++L + P +++YN I
Sbjct: 650 GVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAY 709
Query: 444 ARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKH 503
R M A ++SEM GIVPD IT+++ + EEA+ +++ M K +
Sbjct: 710 CRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQ 769
Query: 504 TAYRCVILGLCKQRKVDIA 522
Y ++ G CK + D A
Sbjct: 770 NTYNSIVDGYCKLNRKDEA 788
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 187/409 (45%), Gaps = 9/409 (2%)
Query: 171 KGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTII 230
+ ++ M +G D +T N ++ K K A+ ++ +M L+G SP +TYN++I
Sbjct: 297 EAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLI 356
Query: 231 RGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCY 290
G +EA+ KG P + TYT L+ R A+ + E+M GC
Sbjct: 357 SAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCK 416
Query: 291 PDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDV 350
P+I T+N+ + +G + E + + G+ P+ VT+NTL+ +G V V
Sbjct: 417 PNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGV 476
Query: 351 LEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCK 410
+ M P R T+N +++ + G ++A+++Y M+ PD+ TYNT+L+ L +
Sbjct: 477 FKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALAR 536
Query: 411 EGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLA---RMGSMES-AKELYSEMIGKGIVP 466
G ++ ++L + C P +TY + A +G M S A+E+YS +I P
Sbjct: 537 GGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIE----P 592
Query: 467 DEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQAL 526
+ +L D L EA E+ ++ T ++ +++ V A L
Sbjct: 593 RAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVL 652
Query: 527 DLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKILKTEII 575
D M P Y++L+ + S ++ ++ + ++ K +K +II
Sbjct: 653 DYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILA-KGIKPDII 700
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 147/338 (43%), Gaps = 2/338 (0%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T N +L G + + + M R +P + LI + G ++ +
Sbjct: 453 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVY 512
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
M+ +G PD+ T N V+ L + G + + ++ +M C P+ +TY +++ +
Sbjct: 513 RRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANG 572
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAI-RALEVLEDMAMEGCYPDIIT 295
S ++ P + L+ LVC C + A ++ G PDI T
Sbjct: 573 KEIGLMHSLAEEVYSGVIEPRAVLLKTLV-LVCSKCDLLPEAERAFSELKERGFSPDITT 631
Query: 296 YNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMN 355
NS+VS ++ + + V+ + RG P+ TYN+L++ S + +++L +
Sbjct: 632 LNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREIL 691
Query: 356 ETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVD 415
P ++YN ++ C++ + A ++S M + PD++TYNT + + +
Sbjct: 692 AKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFE 751
Query: 416 EGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAK 453
E I ++ + C P TYN +DG ++ + AK
Sbjct: 752 EAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAK 789
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/467 (26%), Positives = 202/467 (43%), Gaps = 38/467 (8%)
Query: 132 GRLMAAARLIEIMARKSQIPHFPSC---TNLIRGLIKIGQIDKGCKIINIMVMSGGVPDV 188
GRL A ++ A+ S + PS +I L+K +D M G PD
Sbjct: 156 GRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDR 215
Query: 189 ITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKD 248
T N++I G+CK+G + A+ LV+ M G P+ TY +I G G +EA+ +
Sbjct: 216 FTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEM 275
Query: 249 QLRKGCPPYLITYTVLIELVCRYCGAIRALEVL------------------------EDM 284
+ P T + + R +A EVL M
Sbjct: 276 MRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSM 335
Query: 285 AME-----------GCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNT 333
A E G PD T+N+ +S K ET + +SRG++P Y
Sbjct: 336 AKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLV 395
Query: 334 LIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSES 393
L+ +L + + D L+ M + +YN +++ LCK+ ++ A + M
Sbjct: 396 LVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRG 455
Query: 394 CFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAK 453
P++VT+NT LSG G V + +L L P ++T+++ I+ L R ++ A
Sbjct: 456 ISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAF 515
Query: 454 ELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGL 513
+ + EM+ GI P+EIT++ L C + +++L +M + AY I
Sbjct: 516 DCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSF 575
Query: 514 CKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDL 560
CK RKV A + L M+R KPD Y LIKA+++SG EA ++
Sbjct: 576 CKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREM 622
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/458 (22%), Positives = 193/458 (42%), Gaps = 48/458 (10%)
Query: 74 SAVIDRVNEVDHEDWGLESFERRESGELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGR 133
+AVID + + + D F++ S D KP D FT N ++ +C +G
Sbjct: 184 NAVIDALVKSNSLDLAYLKFQQMRS----DGCKP---------DRFTYNILIHGVCKKGV 230
Query: 134 LMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNM 193
+ A RL++ M ++ P+ + T LI G + G++D+ K + +M + P+ T
Sbjct: 231 VDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRT 290
Query: 194 VIGGL------CKR-----GYLKSAVDL------------------------VEDMSLSG 218
+ G+ CK G+++ +L + + G
Sbjct: 291 FVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERG 350
Query: 219 CSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRAL 278
PD+ T+N + + + E + + +G P Y VL++ +
Sbjct: 351 YIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGD 410
Query: 279 EVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSL 338
L+ M ++G + +YN+++ K E + ++ + RG+ PN VT+NT +
Sbjct: 411 RYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGY 470
Query: 339 SSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDI 398
S G V VLE + P +T+++++N LC++ + A + M+ P+
Sbjct: 471 SVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNE 530
Query: 399 VTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSE 458
+TYN L+ C G D ++L + SP L YN I +M ++ A+EL
Sbjct: 531 ITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKT 590
Query: 459 MIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHK 496
M+ G+ PD T+S+L + EA E+ + +
Sbjct: 591 MLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIER 628
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 129/288 (44%)
Query: 183 GGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEA 242
G +PD T N + L K L + + G P Y +++ + + F+E
Sbjct: 350 GYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEG 409
Query: 243 VSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSF 302
+ K G + +Y +I+ +C+ A L +M G P+++T+N+ +S
Sbjct: 410 DRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSG 469
Query: 303 TAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPT 362
+ +G ++ + V+ LL G +P+ +T++ +I+ L D + M E P
Sbjct: 470 YSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPN 529
Query: 363 RVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLY 422
+TYNI++ C +G DR++ L++ M PD+ YN + CK V + +LL
Sbjct: 530 EITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLK 589
Query: 423 LLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEIT 470
+ P TY+ I L+ G A+E++S + G VPD T
Sbjct: 590 TMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYT 637
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 126/284 (44%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T N + L L+ R+ + + P F L++ L+ + +G + +
Sbjct: 354 DSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYL 413
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
M + G + V + N VI LCK +++A + +M G SP+ +T+NT + G +
Sbjct: 414 KQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVR 473
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
G+ + + L G P +IT++++I +CR A + ++M G P+ ITY
Sbjct: 474 GDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITY 533
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
N L+ G + + + + + G+ P+ YN I S +++L+ M
Sbjct: 534 NILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLR 593
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVT 400
P TY+ ++ L +SG A ++S++ C PD T
Sbjct: 594 IGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYT 637
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%)
Query: 333 TLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSE 392
LI S G +DV ++ P+ YN +++ L KS LD A + M S+
Sbjct: 150 VLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSD 209
Query: 393 SCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESA 452
C PD TYN L+ G+CK+G VDE I+L+ + P + TY I IDG G ++ A
Sbjct: 210 GCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEA 269
Query: 453 KELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILG 512
+ M + + P+E T + G +A E+L +KD ++ Y V+
Sbjct: 270 LKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYC 329
Query: 513 LCKQRKVDIAIQALDLMVRSRCKPDEKIYDA 543
L Q L + PD ++A
Sbjct: 330 LSNNSMAKETGQFLRKIGERGYIPDSSTFNA 360
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 55/118 (46%)
Query: 159 LIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSG 218
LIR G D+ K+ M +G PD+ N I CK +K A +L++ M G
Sbjct: 536 LIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIG 595
Query: 219 CSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIR 276
PD TY+T+I+ + + G +EA + R GC P T ++ EL R G R
Sbjct: 596 LKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLVEELDLRKSGLSR 653
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 176/376 (46%), Gaps = 9/376 (2%)
Query: 87 DWGLESFERRESGELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMAR 146
D LE FE+ G+ D G +K D N ++ LC GRL A L+ M
Sbjct: 346 DEALEVFEQMR-GKRTDDGNVIKA------DSIHFNTLIDGLCKVGRLKEAEELLVRMKL 398
Query: 147 KSQ-IPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLK 205
+ + +P+ + LI G + G+++ ++++ M P+V+T N ++GG+C+ L
Sbjct: 399 EERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLN 458
Query: 206 SAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLI 265
AV DM G + +TY T+I N +A+ +++ L GC P Y LI
Sbjct: 459 MAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALI 518
Query: 266 ELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQ 325
+C+ A+ V+E + G D++ YN L+ + E+ Y +++++ G +
Sbjct: 519 SGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKK 578
Query: 326 PNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISL 385
P+++TYNTLI H ++ V+ ++E M E PT TY +++ C G LD A+ L
Sbjct: 579 PDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKL 638
Query: 386 YSTM-VSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLA 444
+ M + P+ V YN L++ K G + + L + P + TYN L
Sbjct: 639 FKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLN 698
Query: 445 RMGSMESAKELYSEMI 460
E+ +L EM+
Sbjct: 699 EKTQGETLLKLMDEMV 714
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/480 (23%), Positives = 205/480 (42%), Gaps = 17/480 (3%)
Query: 101 LVDPGKPVKPPPFVRNDGFTNNKILQNLCT----RGRLMAAARLIEIMARKSQ---IPHF 153
LVD V + F N+I ++ + RL+ ++I +++R S P+
Sbjct: 200 LVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNS 259
Query: 154 PSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVED 213
T I L K + + I++ ++ + + N ++ L + + DLV
Sbjct: 260 VWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLK 319
Query: 214 MSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLR-------KGCPPYLITYTVLIE 266
M PD +T +I + +EA+ + +Q+R I + LI+
Sbjct: 320 MDEVKIRPDVVTLGILINTLCKSRRVDEALEVF-EQMRGKRTDDGNVIKADSIHFNTLID 378
Query: 267 LVCRYCGAIRALEVLEDMAMEG-CYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQ 325
+C+ A E+L M +E C P+ +TYN L+ + G E V+S + ++
Sbjct: 379 GLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIK 438
Query: 326 PNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISL 385
PN VT NT++ + H + M + VTY +++ C +++A+
Sbjct: 439 PNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYW 498
Query: 386 YSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLAR 445
Y M+ C PD Y L+SGLC+ + I+++ L S L+ YN+ I
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD 558
Query: 446 MGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTA 505
+ E E+ ++M +G PD IT+++L F E ++++M + T
Sbjct: 559 KNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTT 618
Query: 506 YRCVILGLCKQRKVDIAIQAL-DLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
Y VI C ++D A++ D+ + S+ P+ IY+ LI A + G +A L + +
Sbjct: 619 YGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 112/460 (24%), Positives = 194/460 (42%), Gaps = 27/460 (5%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQI--------DKGC 173
N ++ L G + A ++++ M +K + FP N I I + ++ +K
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESV--FPP--NRITADIVLHEVWKERLLTEEKII 244
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTII--- 230
+I+ G P+ + I LCK +A D++ D+ + +A +N ++
Sbjct: 245 ALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCL 304
Query: 231 -RGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGC 289
R M D N+ V D+++ P ++T +LI +C+ ALEV E M +
Sbjct: 305 GRNM-DISRMNDLV-LKMDEVK--IRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRT 360
Query: 290 ------YPDIITYNSLVSFTAKQGVYEETY-LVISNLLSRGMQPNAVTYNTLIHSLSSHG 342
D I +N+L+ K G +E L++ L PNAVTYN LI G
Sbjct: 361 DDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAG 420
Query: 343 YWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYN 402
+ +V+ M E P VT N ++ G+C+ L+ A+ + M E ++VTY
Sbjct: 421 KLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYM 480
Query: 403 TLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGK 462
TL+ C V++ + + CSP Y I GL ++ A + ++
Sbjct: 481 TLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEG 540
Query: 463 GIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIA 522
G D + ++ L FC + E+ E+L +M K+ +K Y +I K + +
Sbjct: 541 GFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESV 600
Query: 523 IQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQ 562
+ ++ M P Y A+I A G + EA L +
Sbjct: 601 ERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFK 640
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 155/319 (48%), Gaps = 19/319 (5%)
Query: 263 VLIELVCRYCGAIRALEVLEDMAM-EGCYP-DIITYNSLVSFTAKQGVYEETYLV--ISN 318
V+++++ R A +VL++M E +P + IT + ++ K+ + E ++ IS
Sbjct: 190 VVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISR 249
Query: 319 LLSRGMQPNAVTYNTLIHSL----SSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLC 374
S G+ PN+V I SL ++ WD + D+++ +PP +N +L+ L
Sbjct: 250 FSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPP----FNALLSCLG 305
Query: 375 KSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLV 434
++ + R L M PD+VT L++ LCK VDE +++ + G G V
Sbjct: 306 RNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNV 365
Query: 435 T------YNIAIDGLARMGSMESAKELYSEM-IGKGIVPDEITHSSLAWGFCGVDQLEEA 487
+N IDGL ++G ++ A+EL M + + VP+ +T++ L G+C +LE A
Sbjct: 366 IKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETA 425
Query: 488 MELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKA 547
E++ M + + K ++ G+C+ +++A+ M + K + Y LI A
Sbjct: 426 KEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHA 485
Query: 548 VADSGMVKEANDLHQRLIE 566
V++A +++++E
Sbjct: 486 CCSVSNVEKAMYWYEKMLE 504
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 153/319 (47%)
Query: 159 LIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSG 218
L+ K G I K+ + + P V++ N +I G CK G L L M S
Sbjct: 246 LMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSR 305
Query: 219 CSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRAL 278
PD TY+ +I + + + A + + ++G P + +T LI R
Sbjct: 306 TRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMK 365
Query: 279 EVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSL 338
E + M +G PDI+ YN+LV+ K G ++ ++ RG++P+ +TY TLI
Sbjct: 366 ESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGF 425
Query: 339 SSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDI 398
G + ++ + M++ RV ++ ++ G+CK G + A M+ PD
Sbjct: 426 CRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDD 485
Query: 399 VTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSE 458
VTY ++ CK+G G +LL + P +VTYN+ ++GL ++G M++A L
Sbjct: 486 VTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDA 545
Query: 459 MIGKGIVPDEITHSSLAWG 477
M+ G+VPD+IT+++L G
Sbjct: 546 MLNIGVVPDDITYNTLLEG 564
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 174/388 (44%), Gaps = 17/388 (4%)
Query: 100 ELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNL 159
E++D G P+ F N ++ C G + A ++ + + ++S P S L
Sbjct: 230 EILDAGFPLNVYVF--------NILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTL 281
Query: 160 IRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGC 219
I G K+G +D+G ++ + M S PDV T + +I LCK + A L ++M G
Sbjct: 282 INGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGL 341
Query: 220 SPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALE 279
P+ + + T+I G G + ++ L KG P ++ Y L+ C+ + A
Sbjct: 342 IPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARN 401
Query: 280 VLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLS 339
+++ M G PD ITY +L+ + G E + + G++ + V ++ L+ +
Sbjct: 402 IVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMC 461
Query: 340 SHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIV 399
G + L M P VTY +M++ CK G L M S+ P +V
Sbjct: 462 KEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVV 521
Query: 400 TYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEM 459
TYN LL+GLCK G + LL + P +TYN ++G R ++ + Y +
Sbjct: 522 TYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHA---NSSKRYIQK 578
Query: 460 IGKGIVPDEITHSSLAWGFCGVDQLEEA 487
GIV D ++ S+ V++L+ A
Sbjct: 579 PEIGIVADLASYKSI------VNELDRA 600
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 154/331 (46%)
Query: 217 SGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIR 276
+G + +N ++ +GN ++A + + ++ P ++++ LI C+
Sbjct: 234 AGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDE 293
Query: 277 ALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIH 336
+ M PD+ TY++L++ K+ + + + + RG+ PN V + TLIH
Sbjct: 294 GFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIH 353
Query: 337 SLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFP 396
S +G D + + + M P V YN ++NG CK+G L A ++ M+ P
Sbjct: 354 GHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRP 413
Query: 397 DIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELY 456
D +TY TL+ G C+ G V+ +++ + V ++ + G+ + G + A+
Sbjct: 414 DKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERAL 473
Query: 457 SEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQ 516
EM+ GI PD++T++ + FC + +LLKEM Y ++ GLCK
Sbjct: 474 REMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKL 533
Query: 517 RKVDIAIQALDLMVRSRCKPDEKIYDALIKA 547
++ A LD M+ PD+ Y+ L++
Sbjct: 534 GQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 137/268 (51%), Gaps = 1/268 (0%)
Query: 286 MEGCYP-DIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYW 344
++ +P ++ +N L++ K+G + V + R +QP V++NTLI+ G
Sbjct: 232 LDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNL 291
Query: 345 DGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTL 404
D + M ++ + P TY+ ++N LCK +D A L+ M P+ V + TL
Sbjct: 292 DEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTL 351
Query: 405 LSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGI 464
+ G + G +D + + P +V YN ++G + G + +A+ + MI +G+
Sbjct: 352 IHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGL 411
Query: 465 VPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQ 524
PD+IT+++L GFC +E A+E+ KEM + ++ + ++ G+CK+ +V A +
Sbjct: 412 RPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAER 471
Query: 525 ALDLMVRSRCKPDEKIYDALIKAVADSG 552
AL M+R+ KPD+ Y ++ A G
Sbjct: 472 ALREMLRAGIKPDDVTYTMMMDAFCKKG 499
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 151/330 (45%)
Query: 245 FWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTA 304
F+ + L G P + + +L+ C+ A +V +++ P ++++N+L++
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC 286
Query: 305 KQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRV 364
K G +E + + + +P+ TY+ LI++L DG + + M + P V
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV 346
Query: 365 TYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLL 424
+ +++G ++G +D Y M+S+ PDIV YNTL++G CK G + ++ +
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406
Query: 425 TGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQL 484
P +TY IDG R G +E+A E+ EM GI D + S+L G C ++
Sbjct: 407 IRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRV 466
Query: 485 EEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDAL 544
+A L+EM + K Y ++ CK+ + L M P Y+ L
Sbjct: 467 IDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVL 526
Query: 545 IKAVADSGMVKEANDLHQRLIEWKILKTEI 574
+ + G +K A+ L ++ ++ +I
Sbjct: 527 LNGLCKLGQMKNADMLLDAMLNIGVVPDDI 556
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 176/420 (41%), Gaps = 38/420 (9%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D + K++ L RGR A + + + P + T L+ L + +I
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
+ + +G PD I N +I + G L A+ + E M SGC P A T+NT+I+G
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 237 GNFNEAVSFWKDQLR-KGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIIT 295
G E+ LR + P T +L++ C A ++ M G PD++T
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 296 YNSLVSFTAK------------------------------------QGVYEETYLVISNL 319
+N+L A+ +G EE +
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM 557
Query: 320 LSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLL 379
G+ PN +N+LI + DGV +V+++M E P VT++ ++N G +
Sbjct: 558 KELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDM 617
Query: 380 DRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIA 439
R +Y+ M+ PDI ++ L G + G ++ Q+L + P +V Y
Sbjct: 618 KRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQI 677
Query: 440 IDGLARMGSMESAKELYSEMIG-KGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKD 498
I G G M+ A ++Y +M G G+ P+ T+ +L WGF Q +A ELLK+M K+
Sbjct: 678 ISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKN 737
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 193/410 (47%), Gaps = 5/410 (1%)
Query: 155 SCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDM 214
S T L+ GLI+ G+ + I N ++ G P +IT ++ L ++ + S + L+ +
Sbjct: 321 SRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKV 380
Query: 215 SLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGA 274
+G PD I +N II + GN ++A+ ++ GC P T+ LI+ + G
Sbjct: 381 EKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGK-IGK 439
Query: 275 IRALEVLEDMAM--EGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYN 332
+ L DM + E P+ T N LV Q EE + ++ + S G++P+ VT+N
Sbjct: 440 LEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFN 499
Query: 333 TLIHSLSSHGYWDGVDD-VLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVS 391
TL + + G +D ++ M P T ++NG C+ G ++ A+ + M
Sbjct: 500 TLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKE 559
Query: 392 ESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMES 451
P++ +N+L+ G +D +++ L+ P +VT++ ++ + +G M+
Sbjct: 560 LGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKR 619
Query: 452 AKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVIL 511
+E+Y++M+ GI PD S LA G+ + E+A ++L +M K + Y +I
Sbjct: 620 CEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIIS 679
Query: 512 GLCKQRKVDIAIQALDLMVR-SRCKPDEKIYDALIKAVADSGMVKEANDL 560
G C ++ A+Q M P+ Y+ LI ++ +A +L
Sbjct: 680 GWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEEL 729
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 174/390 (44%), Gaps = 4/390 (1%)
Query: 179 MVMSGGVP--DVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
++ SGG DV + ++ GL +RG + A + + G P ITY T++ + +
Sbjct: 308 VICSGGTTCGDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQ 367
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
+F+ +S + G P I + +I +A+++ E M GC P T+
Sbjct: 368 KHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTF 427
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGM-QPNAVTYNTLIHSLSSHGYWDGVDDVLEIMN 355
N+L+ K G EE+ ++ +L M QPN T N L+ + + + +++ M
Sbjct: 428 NTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQ 487
Query: 356 ETSSPPTRVTYNIMLNGLCKSGLLDRAISL-YSTMVSESCFPDIVTYNTLLSGLCKEGFV 414
P VT+N + + G A + M+ P++ T T+++G C+EG +
Sbjct: 488 SYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKM 547
Query: 415 DEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSL 474
+E ++ Y + P L +N I G + M+ E+ M G+ PD +T S+L
Sbjct: 548 EEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTL 607
Query: 475 AWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRC 534
+ V ++ E+ +M + A+ + G + + + A Q L+ M +
Sbjct: 608 MNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGV 667
Query: 535 KPDEKIYDALIKAVADSGMVKEANDLHQRL 564
+P+ IY +I +G +K+A +++++
Sbjct: 668 RPNVVIYTQIISGWCSAGEMKKAMQVYKKM 697
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 103/244 (42%), Gaps = 1/244 (0%)
Query: 136 AAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVI 195
A +I M P+ +C ++ G + G++++ + M G P++ N +I
Sbjct: 514 AEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLI 573
Query: 196 GGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCP 255
G + ++V+ M G PD +T++T++ G+ + D L G
Sbjct: 574 KGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGID 633
Query: 256 PYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLV 315
P + +++L + R +A ++L M G P+++ Y ++S G ++ V
Sbjct: 634 PDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQV 693
Query: 316 ISNLLS-RGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLC 374
+ G+ PN TY TLI +++L+ M + PTR T ++ +G
Sbjct: 694 YKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWK 753
Query: 375 KSGL 378
G+
Sbjct: 754 SIGV 757
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 156/332 (46%), Gaps = 3/332 (0%)
Query: 192 NMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF--NEAVSFWKDQ 249
N ++G + G A +LV+ M GC PD I++NT+I G N AV
Sbjct: 229 NAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMV 288
Query: 250 LRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVY 309
G P ITY L+ R A++V EDM C PD+ TYN+++S + G+
Sbjct: 289 RNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLA 348
Query: 310 EETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIM 369
E + L +G P+AVTYN+L+++ + + V +V + M + +TYN +
Sbjct: 349 AEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTI 408
Query: 370 LNGLCKSGLLDRAISLYSTMVSESCF-PDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTN 428
++ K G LD A+ LY M S PD +TY L+ L K E L+ +
Sbjct: 409 IHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVG 468
Query: 429 CSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAM 488
P L TY+ I G A+ G E A++ +S M+ G PD + +S + ++ +A
Sbjct: 469 IKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAW 528
Query: 489 ELLKEMHKKDEKIKHTAYRCVILGLCKQRKVD 520
L ++M +T Y +ILGL K+ + D
Sbjct: 529 GLYRDMISDGHTPSYTLYELMILGLMKENRSD 560
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 160/334 (47%), Gaps = 5/334 (1%)
Query: 167 GQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKS--AVDLVEDMSLSGCSPDAI 224
G+ K ++++ M G VPD+I+ N +I K G L AV+L++ + SG PDAI
Sbjct: 239 GKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAI 298
Query: 225 TYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCG-AIRALEVLED 283
TYNT++ N + AV ++D C P L TY +I + R CG A A + +
Sbjct: 299 TYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGR-CGLAAEAERLFME 357
Query: 284 MAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGY 343
+ ++G +PD +TYNSL+ A++ E+ V + G + +TYNT+IH G
Sbjct: 358 LELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQ 417
Query: 344 WDGVDDVLEIMNETSSP-PTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYN 402
D + + M S P +TY ++++ L K+ A +L S M+ P + TY+
Sbjct: 418 LDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYS 477
Query: 403 TLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGK 462
L+ G K G +E + + P + Y++ +D L R A LY +MI
Sbjct: 478 ALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISD 537
Query: 463 GIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHK 496
G P + + G ++ ++ + +++M +
Sbjct: 538 GHTPSYTLYELMILGLMKENRSDDIQKTIRDMEE 571
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 143/308 (46%), Gaps = 3/308 (0%)
Query: 261 YTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLV--ISN 318
Y ++ + R +A E+++ M GC PD+I++N+L++ K G V +
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 319 LLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGL 378
+ + G++P+A+TYNTL+ + S DG V E M P TYN M++ + GL
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 379 LDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNI 438
A L+ + + FPD VTYN+LL +E ++ ++ + +TYN
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 439 AIDGLARMGSMESAKELYSEMIG-KGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKK 497
I + G ++ A +LY +M G G PD IT++ L ++ EA L+ EM
Sbjct: 408 IIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDV 467
Query: 498 DEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
K Y +I G K K + A M+RS KPD Y ++ + ++A
Sbjct: 468 GIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKA 527
Query: 558 NDLHQRLI 565
L++ +I
Sbjct: 528 WGLYRDMI 535
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 136/323 (42%), Gaps = 38/323 (11%)
Query: 132 GRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQI--DKGCKIINIMVMSGGVPDVI 189
G+ A L++ M ++ +P S LI +K G + + ++++++ SG PD I
Sbjct: 239 GKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAI 298
Query: 190 TCNMVIGGLCKRGYLKSAVDLVEDMS---------------------------------- 215
T N ++ + L AV + EDM
Sbjct: 299 TYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMEL 358
Query: 216 -LSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGA 274
L G PDA+TYN+++ + N + ++ + G +TY +I + +
Sbjct: 359 ELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQL 418
Query: 275 IRALEVLEDM-AMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNT 333
AL++ +DM + G PD ITY L+ K E ++S +L G++P TY+
Sbjct: 419 DLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSA 478
Query: 334 LIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSES 393
LI + G + +D M + + P + Y++ML+ L + +A LY M+S+
Sbjct: 479 LICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDG 538
Query: 394 CFPDIVTYNTLLSGLCKEGFVDE 416
P Y ++ GL KE D+
Sbjct: 539 HTPSYTLYELMILGLMKENRSDD 561
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 162/362 (44%), Gaps = 11/362 (3%)
Query: 207 AVDLVEDMSLSGC-SPDAITYNTIIRGMFDKGNFNEAVSFWKDQ-----LRKGCPPYLIT 260
A + D+ LSGC + +++ + ++ ++ K F E +Q C P
Sbjct: 700 ASQVFSDLRLSGCEASESVCKSMVV--VYCKLGFPETAHQVVNQAETKGFHFACSP---M 754
Query: 261 YTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLL 320
YT +IE + +A V+ ++ G PD+ T+NSL+S A+ G YE + + ++
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 321 SRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLD 380
G P + N L+H+L G + + V+E + + ++ + +ML+ ++G +
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 381 RAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAI 440
+YS+M + P I Y ++ LCK V + ++ + N L +N +
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSML 934
Query: 441 DGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEK 500
+ + ++Y + G+ PDE T+++L +C + EE L+++M
Sbjct: 935 KMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLD 994
Query: 501 IKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDL 560
K Y+ +I KQ+ ++ A Q + ++ K D Y ++K DSG +A L
Sbjct: 995 PKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKL 1054
Query: 561 HQ 562
Q
Sbjct: 1055 LQ 1056
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/373 (20%), Positives = 156/373 (41%), Gaps = 12/373 (3%)
Query: 144 MARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGY 203
+ + + P + +L+ + G ++ I N M+ G P V + N+++ LC G
Sbjct: 778 LRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGR 837
Query: 204 LKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTV 263
L+ +VE++ G + ++ GN E + G P + Y +
Sbjct: 838 LEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRM 897
Query: 264 LIELVCRYCGAIRALEVLEDMAMEGCYP-DIITYNSLVSFTAKQGVYEETYLVISNLLSR 322
+IEL+C+ +R E++ E + ++ +NS++ Y++T V +
Sbjct: 898 MIELLCK-GKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKET 956
Query: 323 GMQPNAVTYNTLI-----HSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSG 377
G++P+ TYNTLI GY +++ M P TY +++ K
Sbjct: 957 GLEPDETTYNTLIIMYCRDRRPEEGYL-----LMQQMRNLGLDPKLDTYKSLISAFGKQK 1011
Query: 378 LLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYN 437
L++A L+ ++S+ D Y+T++ G + +LL ++ P L T +
Sbjct: 1012 CLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMH 1071
Query: 438 IAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKK 497
+ + + G+ + A+++ S + + + +SS+ + +E L EM K+
Sbjct: 1072 LLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKE 1131
Query: 498 DEKIKHTAYRCVI 510
+ H + C +
Sbjct: 1132 GLEPDHRIWTCFV 1144
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 113/283 (39%), Gaps = 47/283 (16%)
Query: 326 PNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPT---RV-TYNIMLNGLCKSGLLDR 381
PNA ++ L G W+ +EI T + PT RV YN M+ +SG +
Sbjct: 189 PNARMVAAILGVL---GRWNQESLAVEIF--TRAEPTVGDRVQVYNAMMGVYSRSGKFSK 243
Query: 382 AISLYSTMVSESCFPDIV-------------------------------------TYNTL 404
A L M C PD++ TYNTL
Sbjct: 244 AQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTL 303
Query: 405 LSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGI 464
LS ++ +D +++ + C P L TYN I R G A+ L+ E+ KG
Sbjct: 304 LSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGF 363
Query: 465 VPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQ 524
PD +T++SL + F E+ E+ ++M K Y +I KQ ++D+A+Q
Sbjct: 364 FPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQ 423
Query: 525 AL-DLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
D+ S PD Y LI ++ + EA L +++
Sbjct: 424 LYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLD 466
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/396 (19%), Positives = 151/396 (38%), Gaps = 41/396 (10%)
Query: 194 VIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKG 253
+I K+ + A +V ++ SG +PD T+N+++ G + A + + +R G
Sbjct: 758 IIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDG 817
Query: 254 CPPYLITYTVLIELVC---RYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYE 310
P + + +L+ +C R +E L+DM + I+ ++ A+ G
Sbjct: 818 PSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILL---MLDAFARAGNIF 874
Query: 311 ETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIML 370
E + S++ + G P Y +I L + ++ M E + +N ML
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSML 934
Query: 371 NGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCS 430
+ + +Y + PD TYNTL+ C++ +EG L+ +
Sbjct: 935 KMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLD 994
Query: 431 PGLVTYNIAIDGLARMGSMESAKELYSEMIGK---------------------------- 462
P L TY I + +E A++L+ E++ K
Sbjct: 995 PKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKL 1054
Query: 463 -------GIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCK 515
GI P T L + +EA ++L + + ++ Y VI +
Sbjct: 1055 LQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLR 1114
Query: 516 QRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADS 551
+ + I+ L M + +PD +I+ ++A + S
Sbjct: 1115 SKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFS 1150
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/325 (19%), Positives = 129/325 (39%), Gaps = 36/325 (11%)
Query: 277 ALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQ-PNAVTYNTLI 335
A +V D+ + GC S+V K G E + V++ ++G + Y +I
Sbjct: 700 ASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDII 759
Query: 336 HSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCF 395
+ W + V+ + ++ P T+N +++ + G +RA ++++TM+ +
Sbjct: 760 EAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPS 819
Query: 396 PDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKEL 455
P + + N LL LC +G ++E ++ L + + +D AR G++ K++
Sbjct: 820 PTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKI 879
Query: 456 YSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIK------------- 502
YS M G +P + + C ++ +A ++ EM + + K++
Sbjct: 880 YSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTA 939
Query: 503 ----------------------HTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKI 540
T Y +I+ C+ R+ + + M P
Sbjct: 940 IEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDT 999
Query: 541 YDALIKAVADSGMVKEANDLHQRLI 565
Y +LI A +++A L + L+
Sbjct: 1000 YKSLISAFGKQKCLEQAEQLFEELL 1024
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 108/263 (41%), Gaps = 9/263 (3%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D +T N ++ G A RL + K P + +L+ + +K ++
Sbjct: 331 DLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVY 390
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMS-LSGCSPDAITYNTIIRGMFD 235
M G D +T N +I K+G L A+ L +DM LSG +PDAITY +I +
Sbjct: 391 QQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGK 450
Query: 236 KGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLED----MAMEGCYP 291
EA + + L G P L TY+ LI C Y A + E ED M G P
Sbjct: 451 ANRTVEAAALMSEMLDVGIKPTLQTYSALI---CGYAKAGKREEA-EDTFSCMLRSGTKP 506
Query: 292 DIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVL 351
D + Y+ ++ + + + + +++S G P+ Y +I L D + +
Sbjct: 507 DNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTI 566
Query: 352 EIMNETSSPPTRVTYNIMLNGLC 374
M E ++++ G C
Sbjct: 567 RDMEELCGMNPLEISSVLVKGEC 589
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 103/527 (19%), Positives = 202/527 (38%), Gaps = 85/527 (16%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T ++ +L R + AA L+ M P + + LI G K G+ ++
Sbjct: 437 DAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTF 496
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
+ M+ SG PD + ++++ L + + A L DM G +P Y +I G+ +
Sbjct: 497 SCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKE 556
Query: 237 GNFNEAVSFWKDQLRK-GCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIIT 295
++ +D G P I+ +VL++ C + A R L+V G + T
Sbjct: 557 NRSDDIQKTIRDMEELCGMNPLEIS-SVLVKGEC-FDLAARQLKV---AITNGYELENDT 611
Query: 296 YNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLI------HSLSS--------- 340
S++ + G + E + ++ L + LI ++LS+
Sbjct: 612 LLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALDEYFADP 671
Query: 341 --HGYWDGVDDVLE------IMNETSSPPTRVTYNIMLNG--------------LCKSGL 378
HG+ G + E + NE + ++V ++ L+G CK G
Sbjct: 672 CVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGF 731
Query: 379 LDRAISLYSTMVSE----SCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLV 434
+ A + + ++ +C P Y ++ K+ + ++ L + +P L
Sbjct: 732 PETAHQVVNQAETKGFHFACSP---MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLK 788
Query: 435 TYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEM 494
T+N + A+ G E A+ +++ M+ G P + + L C +LEE +++E+
Sbjct: 789 TWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEEL 848
Query: 495 HKKDEKIKHTA-----------------------------------YRCVILGLCKQRKV 519
KI ++ YR +I LCK ++V
Sbjct: 849 QDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRV 908
Query: 520 DIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
A + M + K + I+++++K K+ ++QR+ E
Sbjct: 909 RDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKE 955
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 109/451 (24%), Positives = 211/451 (46%), Gaps = 6/451 (1%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T N+++ G AA +IE+M +K +P+ + T +I K G+ D+ K+
Sbjct: 350 DSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLF 409
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
M +G VP+ T N V+ L K+ + ++ DM +GCSP+ T+NT++ +K
Sbjct: 410 YSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNK 469
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
G +++ G P T+ LI R + A ++ +M G + TY
Sbjct: 470 GMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTY 529
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
N+L++ A++G + VIS++ S+G +P +Y+ ++ + G + G++ + + E
Sbjct: 530 NALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKE 589
Query: 357 TSSPPTRVTYNIML--NGLCKS-GLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
P+ + +L N C++ +RA +L+ PD+V +N++LS +
Sbjct: 590 GQIFPSWMLLRTLLLANFKCRALAGSERAFTLFK---KHGYKPDMVIFNSMLSIFTRNNM 646
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSS 473
D+ +L + SP LVTYN +D R G A+E+ + + PD +++++
Sbjct: 647 YDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNT 706
Query: 474 LAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSR 533
+ GFC ++EA+ +L EM ++ + Y + G ++ M ++
Sbjct: 707 VIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKND 766
Query: 534 CKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
C+P+E + ++ +G EA D ++
Sbjct: 767 CRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 186/427 (43%), Gaps = 13/427 (3%)
Query: 159 LIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSG 218
+R L + Q K+++ + + + DV ++ + G + A+DL E M G
Sbjct: 181 FVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMG 240
Query: 219 CSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLR-KGCPPYLITYTVLIELVCRYCGAIR- 276
SP +TYN I+ G + D++R KG T + ++ C G +R
Sbjct: 241 PSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLS-ACAREGLLRE 299
Query: 277 ALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIH 336
A E ++ G P +TYN+L+ K GVY E V+ + ++VTYN L+
Sbjct: 300 AKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVA 359
Query: 337 SLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFP 396
+ G+ V+E+M + P +TY +++ K+G D A+ L+ +M C P
Sbjct: 360 AYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVP 419
Query: 397 DIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELY 456
+ TYN +LS L K+ +E I++L + CSP T+N + G + ++
Sbjct: 420 NTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVF 479
Query: 457 SEMIGKGIVPDEITHSSL--AWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLC 514
EM G PD T ++L A+G CG + +A ++ EM + T Y ++ L
Sbjct: 480 REMKSCGFEPDRDTFNTLISAYGRCGSEV--DASKMYGEMTRAGFNACVTTYNALLNALA 537
Query: 515 KQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE------WK 568
++ + M KP E Y +++ A G + R+ E W
Sbjct: 538 RKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWM 597
Query: 569 ILKTEII 575
+L+T ++
Sbjct: 598 LLRTLLL 604
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/453 (24%), Positives = 199/453 (43%), Gaps = 19/453 (4%)
Query: 124 ILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQ-IDKGCKIINIMVMS 182
IL G+ A L E M P + ++ K+G+ K +++ M
Sbjct: 216 ILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSK 275
Query: 183 GGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEA 242
G D TC+ V+ + G L+ A + ++ G P +TYN +++ G + EA
Sbjct: 276 GLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEA 335
Query: 243 VSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSF 302
+S K+ CP +TY L+ R + A V+E M +G P+ ITY +++
Sbjct: 336 LSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDA 395
Query: 303 TAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPT 362
K G +E + ++ G PN TYN ++ L + + +L M P
Sbjct: 396 YGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPN 455
Query: 363 RVTYNIMLNGLCKSGLLDRAIS-LYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLL 421
R T+N ML LC + +D+ ++ ++ M S PD T+NTL+S + G + ++
Sbjct: 456 RATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMY 514
Query: 422 YLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSL------A 475
+T + + TYN ++ LAR G S + + S+M KG P E ++S +
Sbjct: 515 GEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKG 574
Query: 476 WGFCGVDQLEEAMELLKEMHKKDEKI--KHTAYRCVILGLCKQRKVDIAIQALDLMVRSR 533
+ G++++E + K+ +I R ++L K R + + +A L +
Sbjct: 575 GNYLGIERIENRI--------KEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHG 626
Query: 534 CKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
KPD I+++++ + M +A + + + E
Sbjct: 627 YKPDMVIFNSMLSIFTRNNMYDQAEGILESIRE 659
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 88/230 (38%), Gaps = 5/230 (2%)
Query: 333 TLIHSLSSHGYWDGVDDVLEIM----NETSSPPTRVTYNIMLNGLCKSGLLDRAISLYST 388
+L+ L G+W+ + E + N + I + L + A L
Sbjct: 141 SLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDK 200
Query: 389 MVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMG- 447
+ + D+ Y T+L + G ++ I L + SP LVTYN+ +D +MG
Sbjct: 201 IPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGR 260
Query: 448 SMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYR 507
S + EM KG+ DE T S++ L EA E E+ + Y
Sbjct: 261 SWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYN 320
Query: 508 CVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
++ K A+ L M + C D Y+ L+ A +G KEA
Sbjct: 321 ALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEA 370
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/477 (24%), Positives = 208/477 (43%), Gaps = 42/477 (8%)
Query: 132 GRLMAAARLIEIMARKSQIPHFPSCT--NLIRGLIKIGQIDKGCKIINIMVMSGGVP-DV 188
GR R+I ++ S+ PS N I ++ ID + +M+ G+ DV
Sbjct: 123 GRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDV 182
Query: 189 ITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKD 248
T +++ GL + L++ M SG +P+A+ YNT++ + G A S +
Sbjct: 183 YTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSE 242
Query: 249 QLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGV 308
P +T+ +LI C I+++ +LE G PD++T ++ +G
Sbjct: 243 MKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGR 298
Query: 309 YEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNI 368
E V+ + S+G + + V NTL+ + G M P TYN+
Sbjct: 299 VSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNL 358
Query: 369 MLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLL------- 421
++ G C G+LD A+ ++ M +++ + T+NTL+ GL G D+G+++L
Sbjct: 359 LIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSD 418
Query: 422 ----------------------------YLLTGTNCSPGLVTYNIAIDGLARMGSMESAK 453
+LL P V + + L G M+ K
Sbjct: 419 TVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLK 478
Query: 454 ELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGL 513
Y +MIG+G VP I L + ++EE++EL+ +M + + + + VI+G
Sbjct: 479 TAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGF 538
Query: 514 CKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKIL 570
CKQ KV I+ ++ M C PD + Y+ L++ + G +++A L R++E I+
Sbjct: 539 CKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIV 595
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 189/424 (44%), Gaps = 43/424 (10%)
Query: 159 LIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSG 218
L++GL +I G K++ IM SG P+ + N ++ LCK G + A L+ +M
Sbjct: 188 LMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK--- 244
Query: 219 CSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRAL 278
P+ +T+N +I ++ +++ + G P ++T T ++E++C AL
Sbjct: 245 -EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEAL 303
Query: 279 EVLE-----------------------------------DMAMEGCYPDIITYNSLVSFT 303
EVLE +M +G P++ TYN L++
Sbjct: 304 EVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGY 363
Query: 304 AKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPP-T 362
G+ + +++ + ++ N T+NTLI LS G D +LE+M ++ +
Sbjct: 364 CDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGA 423
Query: 363 RVT-YNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLL 421
R+ YN ++ G K + A+ M E FP V + L LC++G +D+
Sbjct: 424 RIDPYNCVIYGFYKENRWEDALEFLLKM--EKLFPRAVDRSFKLISLCEKGGMDDLKTAY 481
Query: 422 YLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGV 481
+ G P ++ + I ++ G +E + EL ++M+ +G +P T +++ GFC
Sbjct: 482 DQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQ 541
Query: 482 DQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIY 541
D++ ++ +++M ++ +Y ++ LC + + A MV PD ++
Sbjct: 542 DKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMW 601
Query: 542 DALI 545
+L+
Sbjct: 602 SSLM 605
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 153/334 (45%), Gaps = 7/334 (2%)
Query: 198 LCKRGYLKSAVDLVEDMSLS-GCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRK-GCP 255
LC + L+++M S G PD + TIIRG F + + V D + K G
Sbjct: 86 LCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRG-FGRARLIKRVISVVDLVSKFGIK 144
Query: 256 PYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLV 315
P L + +++++ + I M G + D+ TY L+ + + + +
Sbjct: 145 PSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKL 204
Query: 316 ISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCK 375
+ + + G+ PNAV YNTL+H+L +G ++ M E P VT+NI+++ C
Sbjct: 205 LQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNILISAYCN 260
Query: 376 SGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVT 435
L +++ L S PD+VT ++ LC EG V E +++L + +V
Sbjct: 261 EQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVA 320
Query: 436 YNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMH 495
N + G +G M A+ + EM KG +P+ T++ L G+C V L+ A++ +M
Sbjct: 321 CNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMK 380
Query: 496 KKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLM 529
+ + +I GL + D ++ L++M
Sbjct: 381 TDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMM 414
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 162/364 (44%), Gaps = 10/364 (2%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T N ++ C +L+ + L+E +P + T ++ L G++ + +++ +
Sbjct: 250 TFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERV 309
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
GG DV+ CN ++ G C G ++ A +M G P+ TYN +I G D G
Sbjct: 310 ESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGML 369
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVC---RYCGAIRALEVLEDM-AMEGCYPDIIT 295
+ A+ + D T+ LI + R ++ LE+++D + G D
Sbjct: 370 DSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARID--P 427
Query: 296 YNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMN 355
YN ++ K+ +E+ + L + P AV + + SL G D + + M
Sbjct: 428 YNCVIYGFYKENRWEDALEFL--LKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMI 485
Query: 356 ETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVD 415
P+ + + +++ + G ++ ++ L + MV+ P T+N ++ G CK+ V
Sbjct: 486 GEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVM 545
Query: 416 EGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLA 475
GI+ + + C P +YN ++ L G ++ A L+S M+ K IVPD SSL
Sbjct: 546 NGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLM 605
Query: 476 WGFC 479
FC
Sbjct: 606 --FC 607
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 101/255 (39%), Gaps = 35/255 (13%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T N ++ C G L +A M + +F + LIRGL G+ D G KI+ +M
Sbjct: 355 TYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMM 414
Query: 180 VMSGGV-----------------------------------PDVITCNMVIGGLCKRGYL 204
S V P + + + LC++G +
Sbjct: 415 QDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGM 474
Query: 205 KSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVL 264
+ M G P I + +I G E++ D + +G P T+ +
Sbjct: 475 DDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAV 534
Query: 265 IELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGM 324
I C+ + ++ +EDMA GC PD +YN L+ +G ++ +L+ S ++ + +
Sbjct: 535 IIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSI 594
Query: 325 QPNAVTYNTLIHSLS 339
P+ +++L+ LS
Sbjct: 595 VPDPSMWSSLMFCLS 609
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 191/424 (45%), Gaps = 11/424 (2%)
Query: 155 SCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYL--KSAVDLVE 212
S T LI + G+ + ++++ M P ++T N VI C RG L + + L
Sbjct: 178 SYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINA-CARGGLDWEGLLGLFA 236
Query: 213 DMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYC 272
+M G PD +TYNT++ +G +EA ++ G P L TY+ L+E
Sbjct: 237 EMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETF---- 292
Query: 273 GAIRALE----VLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNA 328
G +R LE +L +MA G PDI +YN L+ AK G +E V + + G PNA
Sbjct: 293 GKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNA 352
Query: 329 VTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYST 388
TY+ L++ G +D V + M +++ P TYNI++ + G ++L+
Sbjct: 353 NTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHD 412
Query: 389 MVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGS 448
MV E+ PD+ TY ++ K G ++ ++L +T + P Y I+ +
Sbjct: 413 MVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAAL 472
Query: 449 MESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRC 508
E A ++ M G P T SL + F ++E+ +L + +
Sbjct: 473 YEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNA 532
Query: 509 VILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWK 568
I + K + A++ M +SRC PDE+ +A++ + + +V E + + +
Sbjct: 533 QIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASD 592
Query: 569 ILKT 572
IL +
Sbjct: 593 ILPS 596
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 199/451 (44%), Gaps = 49/451 (10%)
Query: 124 ILQNLCTRGRLMAAARLIEIMARKSQI---PHFPSCTNLIRGLIKIGQIDKGCKIINIMV 180
+ + RG + RL + M R QI P+ T +I L + G +DK ++ + M
Sbjct: 111 VFKEFAGRGDWQRSLRLFKYMQR--QIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMP 168
Query: 181 MSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTII----RGMFDK 236
G V + +I + G +++++L++ M SP +TYNT+I RG D
Sbjct: 169 SQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLD- 227
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
W+ L + +M EG PDI+TY
Sbjct: 228 ---------WEG----------------------------LLGLFAEMRHEGIQPDIVTY 250
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
N+L+S A +G+ +E +V + G+ P+ TY+ L+ + + V D+L M
Sbjct: 251 NTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMAS 310
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDE 416
S P +YN++L KSG + A+ ++ M + C P+ TY+ LL+ + G D+
Sbjct: 311 GGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDD 370
Query: 417 GIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAW 476
QL + +N P TYNI I+ G + L+ +M+ + I PD T+ + +
Sbjct: 371 VRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIF 430
Query: 477 GFCGVDQL-EEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCK 535
CG L E+A ++L+ M D AY VI + + A+ A + M
Sbjct: 431 A-CGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSN 489
Query: 536 PDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
P + + +L+ + A G+VKE+ + RL++
Sbjct: 490 PSIETFHSLLYSFARGGLVKESEAILSRLVD 520
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 106/454 (23%), Positives = 188/454 (41%), Gaps = 9/454 (1%)
Query: 100 ELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGRL--MAAARLIEIMARKSQIPHFPSCT 157
EL+D K K P + T N ++ N C RG L L M + P +
Sbjct: 197 ELLDRMKNEKISPSI----LTYNTVI-NACARGGLDWEGLLGLFAEMRHEGIQPDIVTYN 251
Query: 158 NLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLS 217
L+ G D+ + M G VPD+ T + ++ K L+ DL+ +M+
Sbjct: 252 TLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASG 311
Query: 218 GCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRA 277
G PD +YN ++ G+ EA+ + GC P TY+VL+ L +
Sbjct: 312 GSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDV 371
Query: 278 LEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHS 337
++ +M PD TYN L+ + G ++E + +++ ++P+ TY +I +
Sbjct: 372 RQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFA 431
Query: 338 LSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPD 397
G + +L+ M P+ Y ++ ++ L + A+ ++TM P
Sbjct: 432 CGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPS 491
Query: 398 IVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYS 457
I T+++LL + G V E +L L + T+N I+ + G E A + Y
Sbjct: 492 IETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYV 551
Query: 458 EMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLC-KQ 516
+M PDE T ++ + ++E E +EM D Y C++L + K
Sbjct: 552 DMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCY-CMMLAVYGKT 610
Query: 517 RKVDIAIQALDLMVRSRCKPDEKIYDALIKAVAD 550
+ D + L+ M+ +R ++ +IK D
Sbjct: 611 ERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYD 644
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 158/341 (46%), Gaps = 2/341 (0%)
Query: 226 YNTIIRGMFDKGNFNEAVSFWKDQLRK-GCPPYLITYTVLIELVCRYCGAIRALEVLEDM 284
+ + + +G++ ++ +K R+ C P YT++I L+ R + LEV ++M
Sbjct: 108 FALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEM 167
Query: 285 AMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGY- 343
+G + +Y +L++ + G YE + ++ + + + P+ +TYNT+I++ + G
Sbjct: 168 PSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLD 227
Query: 344 WDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNT 403
W+G+ + M P VTYN +L+ GL D A ++ TM PD+ TY+
Sbjct: 228 WEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSH 287
Query: 404 LLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKG 463
L+ K +++ LL + P + +YN+ ++ A+ GS++ A ++ +M G
Sbjct: 288 LVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG 347
Query: 464 IVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAI 523
P+ T+S L F + ++ +L EM + Y +I + +
Sbjct: 348 CTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVV 407
Query: 524 QALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
MV +PD + Y+ +I A G+ ++A + Q +
Sbjct: 408 TLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYM 448
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/469 (19%), Positives = 170/469 (36%), Gaps = 106/469 (22%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
++ D T N +L RG A + M +P + ++L+ K+ +++K C
Sbjct: 243 IQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVC 302
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
++ M G +PD+ + N+++ K G +K A+ + M +GC+P+A TY+ ++
Sbjct: 303 DLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLF 362
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
G +++ + + P TY +LIE+ + + DM E PD+
Sbjct: 363 GQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDM 422
Query: 294 ITYNSLVSFTAKQGV-----------------------------------YEETYLVISN 318
TY ++ K G+ YEE + +
Sbjct: 423 ETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNT 482
Query: 319 LLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGL 378
+ G P+ T+++L++S + G + +L + ++ P R T+N + + G
Sbjct: 483 MHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGK 542
Query: 379 LDRAI----------------------SLYS-------------TMVSESCFPDIVTYNT 403
+ A+ S+YS M + P I+ Y
Sbjct: 543 FEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCM 602
Query: 404 LLSGLCKEGFVDEGIQLL---------------------------------YLLTGTN-- 428
+L+ K D+ +LL Y+L N
Sbjct: 603 MLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSE 662
Query: 429 -CSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAW 476
C G+ YN +D L +G E A + +E +G+ P+ + L W
Sbjct: 663 GCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPELFRKNKLVW 711
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 186/408 (45%), Gaps = 5/408 (1%)
Query: 156 CTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDV--ITCNMVIGGLCKRGYLKSAVDLVED 213
CT +IR L + DK V + + +I L + G + A + E
Sbjct: 199 CTYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFET 258
Query: 214 MSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCG 273
G ++ +I G EA+S + G P L+TY +I+ C G
Sbjct: 259 AFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVID-ACGKGG 317
Query: 274 A--IRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTY 331
+ + ++M G PD IT+NSL++ ++ G++E + + +R ++ + +Y
Sbjct: 318 MEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSY 377
Query: 332 NTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVS 391
NTL+ ++ G D ++L M P V+Y+ +++G K+G D A++L+ M
Sbjct: 378 NTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRY 437
Query: 392 ESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMES 451
D V+YNTLLS K G +E + +L + +VTYN + G + G +
Sbjct: 438 LGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDE 497
Query: 452 AKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVIL 511
K++++EM + ++P+ +T+S+L G+ +EAME+ +E + Y +I
Sbjct: 498 VKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALID 557
Query: 512 GLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEAND 559
LCK V A+ +D M + P+ Y+++I A S + + D
Sbjct: 558 ALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 167/351 (47%), Gaps = 9/351 (2%)
Query: 219 CSPDAITYNTIIRGMFDKGNFNEAVSFW----KDQLRKGCPPYLITYTVLIELVCRYCGA 274
C D TY IIR + ++ ++AV F+ K + RK L + +I + RY
Sbjct: 194 CGSDDCTY--IIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLAS--AMISTLGRYGKV 249
Query: 275 IRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTL 334
A + E G + +++L+S + G++EE V +++ G++PN VTYN +
Sbjct: 250 TIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAV 309
Query: 335 IHSLSSHGY-WDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSES 393
I + G + V + M P R+T+N +L + GL + A +L+ M +
Sbjct: 310 IDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRR 369
Query: 394 CFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAK 453
D+ +YNTLL +CK G +D ++L + P +V+Y+ IDG A+ G + A
Sbjct: 370 IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEAL 429
Query: 454 ELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGL 513
L+ EM GI D +++++L + V + EEA+++L+EM K Y ++ G
Sbjct: 430 NLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGY 489
Query: 514 CKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
KQ K D + M R P+ Y LI + G+ KEA ++ +
Sbjct: 490 GKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREF 540
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/445 (23%), Positives = 200/445 (44%), Gaps = 41/445 (9%)
Query: 114 VRNDGFTNNKILQNLCTRG--RLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDK 171
+R + T N ++ + C +G A+ + M R P + +L+ + G +
Sbjct: 299 LRPNLVTYNAVI-DACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEA 357
Query: 172 GCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIR 231
+ + M DV + N ++ +CK G + A +++ M + P+ ++Y+T+I
Sbjct: 358 ARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVID 417
Query: 232 GMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYP 291
G G F+EA++ + + G ++Y L+ + + + AL++L +MA G
Sbjct: 418 GFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKK 477
Query: 292 DIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVL 351
D++TYN+L+ KQG Y+E V + + + PN +TY+TLI S G + + +
Sbjct: 478 DVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYK---EAM 534
Query: 352 EIMNETSSPPTR---VTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGL 408
EI E S R V Y+ +++ LCK+GL+ A+SL M E P++VTYN+++
Sbjct: 535 EIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
Query: 409 CKEGFVD------------------------EGIQLLYLLTGTNCSPGLVTYNIAIDGLA 444
+ +D EG +++ L T +G+
Sbjct: 595 GRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQ 654
Query: 445 RMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHT 504
+ + E++ +M I P+ +T S++ + E+A LL+E+ D K+
Sbjct: 655 ELSCI---LEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVY-- 709
Query: 505 AYRCVILGLCKQRKVDIAIQALDLM 529
V+ GL ++ ++ +QA L
Sbjct: 710 ---GVVHGLLMGQRENVWLQAQSLF 731
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 152/318 (47%), Gaps = 1/318 (0%)
Query: 151 PHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDL 210
P+ +C L++ L K I+ K+++ + G VP+++T ++GG RG ++SA +
Sbjct: 189 PNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRV 248
Query: 211 VEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCR 270
+E+M G PDA TY ++ G G F+EA + D + P +TY V+I +C+
Sbjct: 249 LEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCK 308
Query: 271 YCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVT 330
+ A + ++M PD ++ + +E + +L P+
Sbjct: 309 EKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNAL 368
Query: 331 YNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMV 390
+TLIH L G + + E S P+ +TYN ++ G+C+ G L A L+ M
Sbjct: 369 LSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMY 427
Query: 391 SESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSME 450
C P+ TYN L+ GL K G V EG+++L + C P T+ I +GL ++G E
Sbjct: 428 ERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEE 487
Query: 451 SAKELYSEMIGKGIVPDE 468
A ++ S + G V E
Sbjct: 488 DAMKIVSMAVMNGKVDKE 505
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 180/375 (48%), Gaps = 14/375 (3%)
Query: 124 ILQNLCTRGRLMAAARLIEIMARKSQIPHF------PSCTNLIRGLIKIGQIDKGCKIIN 177
+L+N GR ++ R+ +IP F S L+ LI+ + D +
Sbjct: 126 LLRNYGLAGRYESSMRIF------LRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFK 179
Query: 178 IMVMSGGV-PDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
S G+ P++ TCN+++ LCK+ ++SA +++++ G P+ +TY TI+ G +
Sbjct: 180 NSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVAR 239
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
G+ A ++ L +G P TYTVL++ C+ A V++DM P+ +TY
Sbjct: 240 GDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTY 299
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
++ K+ E + +L R P++ +I +L D + M +
Sbjct: 300 GVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLK 359
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDE 416
+ P + +++ LCK G + A L+ + P ++TYNTL++G+C++G + E
Sbjct: 360 NNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELTE 418
Query: 417 GIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAW 476
+L + C P TYN+ I+GL++ G+++ + EM+ G P++ T L
Sbjct: 419 AGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFE 478
Query: 477 GFCGVDQLEEAMELL 491
G + + E+AM+++
Sbjct: 479 GLQKLGKEEDAMKIV 493
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 156/334 (46%), Gaps = 2/334 (0%)
Query: 225 TYNTIIRGMFDKGNFNEAVSFWKDQLRK-GCPPYLITYTVLIELVCRYCGAIRALEVLED 283
+ NT++ + F+ + +K+ G P + T +L++ +C+ A +VL++
Sbjct: 157 SLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDE 216
Query: 284 MAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGY 343
+ G P+++TY +++ +G E V+ +L RG P+A TY L+ G
Sbjct: 217 IPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGR 276
Query: 344 WDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNT 403
+ V++ M + P VTY +M+ LCK A +++ M+ S PD
Sbjct: 277 FSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCK 336
Query: 404 LLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKG 463
++ LC++ VDE L + NC P + I L + G + A++L+ E KG
Sbjct: 337 VIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDE-FEKG 395
Query: 464 IVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAI 523
+P +T+++L G C +L EA L +M+++ K Y +I GL K V +
Sbjct: 396 SIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGV 455
Query: 524 QALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
+ L+ M+ C P++ + L + + G ++A
Sbjct: 456 RVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDA 489
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 142/303 (46%), Gaps = 1/303 (0%)
Query: 119 FTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINI 178
FT N +++ LC + + +A ++++ + +P+ + T ++ G + G ++ +++
Sbjct: 192 FTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEE 251
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN 238
M+ G PD T +++ G CK G A +++DM + P+ +TY +IR + +
Sbjct: 252 MLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKK 311
Query: 239 FNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNS 298
EA + + + L + P +I+ +C A + M C PD ++
Sbjct: 312 SGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLST 371
Query: 299 LVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETS 358
L+ + K+G E + +G P+ +TYNTLI + G + + M E
Sbjct: 372 LIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERK 430
Query: 359 SPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGI 418
P TYN+++ GL K+G + + + M+ CFP+ T+ L GL K G ++ +
Sbjct: 431 CKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAM 490
Query: 419 QLL 421
+++
Sbjct: 491 KIV 493
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 101/205 (49%), Gaps = 5/205 (2%)
Query: 365 TYNIMLNGLCKSGLLDRAISLYSTMVSESCF---PDIVTYNTLLSGLCKEGFVDEGIQLL 421
+ N +LN L ++ D +++ S+ F P+I T N L+ LCK+ ++ ++L
Sbjct: 157 SLNTLLNVLIQNQRFDLVHAMFKN--SKESFGITPNIFTCNLLVKALCKKNDIESAYKVL 214
Query: 422 YLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGV 481
+ P LVTY + G G MESAK + EM+ +G PD T++ L G+C +
Sbjct: 215 DEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKL 274
Query: 482 DQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIY 541
+ EA ++ +M K + + Y +I LCK++K A D M+ PD +
Sbjct: 275 GRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLC 334
Query: 542 DALIKAVADSGMVKEANDLHQRLIE 566
+I A+ + V EA L +++++
Sbjct: 335 CKVIDALCEDHKVDEACGLWRKMLK 359
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 1/226 (0%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T ++ C GR AA +++ M + P+ + +IR L K + + +
Sbjct: 260 DATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMF 319
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
+ M+ +PD C VI LC+ + A L M + C PD +T+I + +
Sbjct: 320 DEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKE 379
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
G EA + D+ KG P L+TY LI +C A + +DM C P+ TY
Sbjct: 380 GRVTEARKLF-DEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTY 438
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHG 342
N L+ +K G +E V+ +L G PN T+ L L G
Sbjct: 439 NVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLG 484
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 192/412 (46%), Gaps = 10/412 (2%)
Query: 159 LIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSG 218
L++G +K+G +++G ++ ++ SG V+TCN ++ GL K ++ + M G
Sbjct: 172 LVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVG 231
Query: 219 CSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRAL 278
P+ T+N + + NF E F + +G P L+TY L+ CR A
Sbjct: 232 IHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAF 291
Query: 279 EVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSL 338
+ + M PD++TY SL+ K G E + ++ RG++P+ ++YNTLI++
Sbjct: 292 YLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAY 351
Query: 339 SSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDI 398
G +L M S P R T +++ G + G L A++ +
Sbjct: 352 CKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPF 411
Query: 399 VTYNTLLSGLCKEGFVDEGIQLLYLLT---GTNCSPGLVTYNIAIDGLARMGSMESAKEL 455
+ L+ LC+EG LL + G P TYN I+ L+R ++E A L
Sbjct: 412 EVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPE--TYNNLIESLSRCDAIEEALVL 469
Query: 456 YSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRC--VILGL 513
++ + V D T+ +L C + + EA L+ EM D ++K ++ C ++ G
Sbjct: 470 KGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMF--DSEVKPDSFICGALVYGY 527
Query: 514 CKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGM-VKEANDLHQRL 564
CK+ D A + L L D + Y++L+KAV ++G K+A +L +R+
Sbjct: 528 CKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERM 579
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 139/298 (46%), Gaps = 3/298 (1%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T N ++ + C RGRL A L +IM R+ +P + T+LI+GL K G++ + +
Sbjct: 270 DLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTF 329
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
+ MV G PD ++ N +I CK G ++ + L+ +M + PD T I+ G +
Sbjct: 330 HRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVRE 389
Query: 237 GNFNEAVSFWKDQLR-KGCPPYLITYTVLIELVCRYCGAIRALEVLED-MAMEGCYPDII 294
G AV+F + R K P+ + +++ L C+ A +L+ + EG
Sbjct: 390 GRLLSAVNFVVELRRLKVDIPFEVCDFLIVSL-CQEGKPFAAKHLLDRIIEEEGHEAKPE 448
Query: 295 TYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIM 354
TYN+L+ ++ EE ++ L ++ +A TY LI L G + ++ M
Sbjct: 449 TYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEM 508
Query: 355 NETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEG 412
++ P ++ G CK D+A L S E D +YN+L+ +C+ G
Sbjct: 509 FDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETG 566
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 148/371 (39%), Gaps = 26/371 (7%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
+ + +T N + C +E M + P + L+ + G++ +
Sbjct: 232 IHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAF 291
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
+ IM VPD++T +I GLCK G ++ A M G PD ++YNT+I
Sbjct: 292 YLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAY 351
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCR---------YCGAIRALEVLEDM 284
+G ++ + L P T V++E R + +R L+V D+
Sbjct: 352 CKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKV--DI 409
Query: 285 AMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYW 344
E C D + +VS + + +L+ + G + TYN LI SLS
Sbjct: 410 PFEVC--DFL----IVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSR---C 460
Query: 345 DGVDDVL----EIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVT 400
D +++ L ++ N+ + TY ++ LC+ G A SL + M PD
Sbjct: 461 DAIEEALVLKGKLKNQNQVLDAK-TYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFI 519
Query: 401 YNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMG-SMESAKELYSEM 459
L+ G CKE D+ +LL L +YN + + G + A EL M
Sbjct: 520 CGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERM 579
Query: 460 IGKGIVPDEIT 470
G VP+ +T
Sbjct: 580 QRLGFVPNRLT 590
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 115/261 (44%), Gaps = 18/261 (6%)
Query: 323 GMQPNAVTYNTLIHSL-SSHGYWDGVDDVLEIMNETSSPPT-----------------RV 364
G +PN Y L+H L SS + + + E++ TS V
Sbjct: 108 GKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVSATDECNWDPV 167
Query: 365 TYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLL 424
+++++ G K GL++ ++ ++ +VT N LL+GL K +++ Q+ ++
Sbjct: 168 VFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVM 227
Query: 425 TGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQL 484
P T+NI + + + +M +G PD +T+++L +C +L
Sbjct: 228 CRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRL 287
Query: 485 EEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDAL 544
+EA L K M+++ Y +I GLCK +V A Q MV KPD Y+ L
Sbjct: 288 KEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTL 347
Query: 545 IKAVADSGMVKEANDLHQRLI 565
I A GM++++ L ++
Sbjct: 348 IYAYCKEGMMQQSKKLLHEML 368
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 8/183 (4%)
Query: 124 ILQNLCTRGRLMAAARLIE-IMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMS 182
++ +LC G+ AA L++ I+ + + NLI L + I++ + +
Sbjct: 417 LIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQ 476
Query: 183 GGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEA 242
V D T +IG LC+ G + A L+ +M S PD+ ++ G + +F++A
Sbjct: 477 NQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKA 536
Query: 243 ---VSFWKDQLRKGCPPYLITYTVLIELVCRY-CGAIRALEVLEDMAMEGCYPDIITYNS 298
+S + + R P +Y L++ VC CG +ALE+ E M G P+ +T
Sbjct: 537 ERLLSLFAMEFRIFDPE---SYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKY 593
Query: 299 LVS 301
L+
Sbjct: 594 LIQ 596
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 168/380 (44%)
Query: 187 DVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFW 246
DV N +I G K G A+ L+ +G S T +II + D G EA + +
Sbjct: 268 DVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALF 327
Query: 247 KDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQ 306
++ + G P Y L++ + A ++ +M G PD TY+ L+
Sbjct: 328 EELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNA 387
Query: 307 GVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTY 366
G +E +V+ + + +QPN+ ++ L+ G W VL+ M P R Y
Sbjct: 388 GRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFY 447
Query: 367 NIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTG 426
N++++ K LD A++ + M+SE PD VT+NTL+ CK G ++ +
Sbjct: 448 NVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER 507
Query: 427 TNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEE 486
C P TYNI I+ + K L +M +GI+P+ +TH++L + + +
Sbjct: 508 RGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFND 567
Query: 487 AMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIK 546
A+E L+EM K T Y +I ++ + A+ A +M KP ++LI
Sbjct: 568 AIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLIN 627
Query: 547 AVADSGMVKEANDLHQRLIE 566
A + EA + Q + E
Sbjct: 628 AFGEDRRDAEAFAVLQYMKE 647
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 160/354 (45%), Gaps = 2/354 (0%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N +L+ G L A ++ M ++ P + + LI + G+ + ++ M
Sbjct: 343 NALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA 402
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN-FN 240
P+ + ++ G RG + ++++M G PD YN +I F K N +
Sbjct: 403 GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVI-DTFGKFNCLD 461
Query: 241 EAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLV 300
A++ + L +G P +T+ LI+ C++ I A E+ E M GC P TYN ++
Sbjct: 462 HAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMI 521
Query: 301 SFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSP 360
+ Q +++ ++ + S+G+ PN VT+ TL+ G ++ + LE M
Sbjct: 522 NSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLK 581
Query: 361 PTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQL 420
P+ YN ++N + GL ++A++ + M S+ P ++ N+L++ ++ E +
Sbjct: 582 PSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAV 641
Query: 421 LYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSL 474
L + P +VTY + L R+ + +Y EMI G PD S L
Sbjct: 642 LQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSML 695
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 170/427 (39%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N I+ G A +L+ + + ++I L G+ + + +
Sbjct: 273 NDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQ 332
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
SG P N ++ G K G LK A +V +M G SPD TY+ +I + G +
Sbjct: 333 SGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWES 392
Query: 242 AVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVS 301
A K+ P ++ L+ + +VL++M G PD YN ++
Sbjct: 393 ARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVID 452
Query: 302 FTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPP 361
K + +LS G++P+ VT+NTLI HG +++ E M P
Sbjct: 453 TFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLP 512
Query: 362 TRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLL 421
TYNIM+N D L M S+ P++VT+ TL+ K G ++ I+ L
Sbjct: 513 CATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECL 572
Query: 422 YLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGV 481
+ P YN I+ A+ G E A + M G+ P + +SL F
Sbjct: 573 EEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGED 632
Query: 482 DQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIY 541
+ EA +L+ M + K Y ++ L + K + M+ S CKPD K
Sbjct: 633 RRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKAR 692
Query: 542 DALIKAV 548
L A+
Sbjct: 693 SMLRSAL 699
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 126/297 (42%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
V D T + ++ GR +A +++ M P+ + L+ G G+ K
Sbjct: 370 VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTF 429
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
+++ M G PD N+VI K L A+ + M G PD +T+NT+I
Sbjct: 430 QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCH 489
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
G A ++ R+GC P TY ++I +L M +G P++
Sbjct: 490 CKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNV 549
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
+T+ +LV K G + + + + S G++P++ YN LI++ + G + + +
Sbjct: 550 VTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRV 609
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCK 410
M P+ + N ++N + A ++ M PD+VTY TL+ L +
Sbjct: 610 MTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIR 666
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 128/315 (40%), Gaps = 9/315 (2%)
Query: 254 CPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETY 313
C Y + Y++LI + R A + + + +TYN+L+ A+ E+
Sbjct: 163 CFSYELLYSILIHALGRSEKLYEAFLLSQKQTLTP-----LTYNALIGACARNNDIEKAL 217
Query: 314 LVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTY---NIML 370
+I+ + G Q + V Y+ +I SL+ D V +L + E + N ++
Sbjct: 218 NLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVM-LLRLYKEIERDKLELDVQLVNDII 276
Query: 371 NGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCS 430
G KSG +A+ L + T +++S L G E L L +
Sbjct: 277 MGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIK 336
Query: 431 PGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMEL 490
P YN + G + G ++ A+ + SEM +G+ PDE T+S L + + E A +
Sbjct: 337 PRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIV 396
Query: 491 LKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVAD 550
LKEM D + + ++ G + + Q L M KPD + Y+ +I
Sbjct: 397 LKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGK 456
Query: 551 SGMVKEANDLHQRLI 565
+ A R++
Sbjct: 457 FNCLDHAMTTFDRML 471
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/376 (19%), Positives = 153/376 (40%), Gaps = 11/376 (2%)
Query: 192 NMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLR 251
+++I L + L A L + +L+ +TYN +I + +A++ +
Sbjct: 171 SILIHALGRSEKLYEAFLLSQKQTLT-----PLTYNALIGACARNNDIEKALNLIAKMRQ 225
Query: 252 KGCPPYLITYTVLIELVCR--YCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVY 309
G + Y+++I+ + R ++ L + +++ + D+ N ++ AK G
Sbjct: 226 DGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDP 285
Query: 310 EETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIM 369
+ ++ + G+ T ++I +L+ G + + E + ++ P YN +
Sbjct: 286 SKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNAL 345
Query: 370 LNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNC 429
L G K+G L A S+ S M PD TY+ L+ G + +L + +
Sbjct: 346 LKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDV 405
Query: 430 SPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAME 489
P ++ + G G + ++ EM G+ PD ++ + F + L+ AM
Sbjct: 406 QPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMT 465
Query: 490 LLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVA 549
M + + + +I CK + +A + + M R C P Y+ +I +
Sbjct: 466 TFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYG 525
Query: 550 DSGMVKEANDLHQRLI 565
D +E D +RL+
Sbjct: 526 D----QERWDDMKRLL 537
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 186/425 (43%), Gaps = 14/425 (3%)
Query: 151 PHFPSCTNLIRGLI----KIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKS 206
P P T+ LI K G+++ + + M+ SG D +T N +I G+L
Sbjct: 299 PRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSE 358
Query: 207 AVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIE 266
A L++ M G SPD TYN ++ D G+ A+ +++ + G P +T+ ++
Sbjct: 359 AESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLH 418
Query: 267 LVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQP 326
++C+ V+ +M D + ++ +G+ +V + L Q
Sbjct: 419 ILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGL-----VVQAKALFERFQL 473
Query: 327 NAV----TYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRV-TYNIMLNGLCKSGLLDR 381
+ V T +I + G W + V S V YN+M+ K+ L ++
Sbjct: 474 DCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEK 533
Query: 382 AISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAID 441
A+SL+ M ++ +PD TYN+L L VDE ++L + + C PG TY I
Sbjct: 534 ALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIA 593
Query: 442 GLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKI 501
R+G + A +LY M G+ P+E+ + SL GF +EEA++ + M + +
Sbjct: 594 SYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQS 653
Query: 502 KHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLH 561
H +I K ++ A + D M S PD ++++ AD G+V EA +
Sbjct: 654 NHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIF 713
Query: 562 QRLIE 566
L E
Sbjct: 714 NALRE 718
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 178/433 (41%), Gaps = 46/433 (10%)
Query: 100 ELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNL 159
E++ G P+ D T N ++ T G L A L++ M K P + L
Sbjct: 330 EMLKSGVPI--------DTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNIL 381
Query: 160 IRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKR------------------ 201
+ G I+ + + G PD +T V+ LC+R
Sbjct: 382 LSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSI 441
Query: 202 -----------------GYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVS 244
G + A L E L C + T +I +KG + EA +
Sbjct: 442 RIDEHSVPVIMQMYVNEGLVVQAKALFERFQLD-CVLSSTTLAAVIDVYAEKGLWVEAET 500
Query: 245 -FWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFT 303
F+ + G ++ Y V+I+ + +AL + + M +G +PD TYNSL
Sbjct: 501 VFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQML 560
Query: 304 AKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTR 363
A + +E +++ +L G +P TY +I S G D+ E M +T P
Sbjct: 561 AGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNE 620
Query: 364 VTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYL 423
V Y ++NG +SG+++ AI + M + + +L+ K G ++E ++
Sbjct: 621 VVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDK 680
Query: 424 LTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQ 483
+ + P + N + A +G + A+ +++ + KG D I+ +++ + + G+
Sbjct: 681 MKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTC-DVISFATMMYLYKGMGM 739
Query: 484 LEEAMELLKEMHK 496
L+EA+E+ +EM +
Sbjct: 740 LDEAIEVAEEMRE 752
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 169/418 (40%), Gaps = 35/418 (8%)
Query: 181 MSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFN 240
MSG DV+ N++I K + A+ L + M G PD TYN++ + + +
Sbjct: 508 MSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVD 567
Query: 241 EAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLV 300
EA + L GC P TY +I R A+++ E M G P+ + Y SL+
Sbjct: 568 EAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLI 627
Query: 301 SFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSP 360
+ A+ G+ EE + G+Q N + +LI + S G + V + M ++
Sbjct: 628 NGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGG 687
Query: 361 PTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQL 420
P N ML+ G++ A S+++ + E D++++ T++ G +DE I++
Sbjct: 688 PDVAASNSMLSLCADLGIVSEAESIFNAL-REKGTCDVISFATMMYLYKGMGMLDEAIEV 746
Query: 421 LYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMI-------------------G 461
+ + ++N + A G + EL+ EM+
Sbjct: 747 AEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLK 806
Query: 462 KGIVPDEI---------------THSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAY 506
KG VP E T + A F + A+E +E+ + +H AY
Sbjct: 807 KGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAY 866
Query: 507 RCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
VI +D+A++A M +PD L+ +GMV+ +H RL
Sbjct: 867 NAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRL 924
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 142/359 (39%), Gaps = 60/359 (16%)
Query: 256 PYLITYTVLIELVCRYCGAIRALEV-LEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYL 314
P +I Y +++ + R G L + +MA G P TY LV K G+ +E L
Sbjct: 143 PNVIHYNIVLRALGR-AGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALL 201
Query: 315 VISNLLSRGMQPNAVTYNTLIHSLSSHGYW-------------------DGVDDV----- 350
I ++ R P+ VT T++ + G + D +DD
Sbjct: 202 WIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSIDDFPKNGS 261
Query: 351 ---------------------------LEIMNETSSPPTR----VTYNIMLNGLCKSGLL 379
L + + S P + T+N +++ K+G L
Sbjct: 262 AQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRL 321
Query: 380 DRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIA 439
+ A +L+S M+ D VT+NT++ G + E LL + SP TYNI
Sbjct: 322 NDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNIL 381
Query: 440 IDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDE 499
+ A G +E+A E Y ++ G+ PD +TH ++ C + E ++ EM +
Sbjct: 382 LSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSI 441
Query: 500 KI-KHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
+I +H+ VI+ + + + +AL + C A+I A+ G+ EA
Sbjct: 442 RIDEHSV--PVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEA 498
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 143/365 (39%), Gaps = 6/365 (1%)
Query: 132 GRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITC 191
G L A L E M + P+ +LI G + G +++ + +M G + I
Sbjct: 599 GLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVL 658
Query: 192 NMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLR 251
+I K G L+ A + + M S PD N+++ D G +EA S + + LR
Sbjct: 659 TSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIF-NALR 717
Query: 252 KGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEE 311
+ +I++ ++ L A+EV E+M G D ++N +++ A G E
Sbjct: 718 EKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSE 777
Query: 312 T-YLVISNLLSRGMQPNAVTYNTLIHSLSSHGY-WDGVDDVLEIMNETSSPPTRVTYNIM 369
L L+ R + + T+ TL L G + V + NE T +
Sbjct: 778 CCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATL 837
Query: 370 LNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNC 429
+ + GL A+ + S + YN ++ G +D ++ +
Sbjct: 838 FSAM---GLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGL 894
Query: 430 SPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAME 489
P +VT + + G +E K ++S + + P + ++ + ++ + A
Sbjct: 895 EPDIVTQAYLVGIYGKAGMVEGVKRVHSRLTFGELEPSQSLFKAVRDAYVSANRQDLADV 954
Query: 490 LLKEM 494
+ KEM
Sbjct: 955 VKKEM 959
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 137/359 (38%), Gaps = 59/359 (16%)
Query: 262 TVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLS 321
TVL++ R+ +R + + + P++I YN ++ + G ++E L +
Sbjct: 116 TVLLKEQTRWERVLRVFRFFQ--SHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAH 173
Query: 322 RGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDR 381
G+ P TY L+ G ++ M + P VT ++ SG DR
Sbjct: 174 NGVLPTNNTYGMLVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDR 233
Query: 382 AISLYS---------TMVSESCFP------DIVTYNTLLS-GLCKEGFVDEGIQLLYLLT 425
A + + S FP V LS L K G + + L+ +
Sbjct: 234 ADRFFKGWCAGKVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFAS 293
Query: 426 GTNCSPG----LVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGV 481
G++ SP T+N ID + G + A L+SEM+ G+ D +T +++ CG
Sbjct: 294 GSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHT-CGT 352
Query: 482 D-QLEEAMELLKEMHKKD----------------------------EKIKHTA------- 505
L EA LLK+M +K KI+
Sbjct: 353 HGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVT 412
Query: 506 YRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
+R V+ LC+++ V + M R+ + DE +++ + G+V +A L +R
Sbjct: 413 HRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERF 471
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 149/322 (46%)
Query: 150 IPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVD 209
+P SC + L+ G++D + M P+ T NMV+ G C+ G L ++
Sbjct: 200 LPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIE 259
Query: 210 LVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVC 269
L++DM G ++YNT+I G +KG + A+ + G P ++T+ LI C
Sbjct: 260 LLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFC 319
Query: 270 RYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAV 329
R A +V +M P+ +TYN+L++ ++QG +E + +++ G+Q + +
Sbjct: 320 RAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDIL 379
Query: 330 TYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTM 389
TYN LI L ++ +++ + P T++ ++ G C DR LY +M
Sbjct: 380 TYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSM 439
Query: 390 VSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSM 449
+ C P+ T+N L+S C+ D Q+L + + T + +GL G
Sbjct: 440 IRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKD 499
Query: 450 ESAKELYSEMIGKGIVPDEITH 471
+ K+L EM GK + + +
Sbjct: 500 QLVKKLLQEMEGKKFLQESFNN 521
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 169/382 (44%), Gaps = 8/382 (2%)
Query: 153 FPSCTNLIRGLIKIGQIDKGCKIINIMVMS----GGVPDVITCNMVIGGLCKRGYLKSAV 208
F S +++R ++ G +D K+ + ++ S P V K+ ++A
Sbjct: 131 FKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKK--FRNAT 188
Query: 209 DLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELV 268
D M G P + N + + +G + A+ F+++ R P T +++
Sbjct: 189 DTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGY 248
Query: 269 CRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSR-GMQPN 327
CR + +E+L+DM G ++YN+L++ ++G+ L + N++ + G+QPN
Sbjct: 249 CRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSA-LKLKNMMGKSGLQPN 307
Query: 328 AVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYS 387
VT+NTLIH V M + P VTYN ++NG + G + A Y
Sbjct: 308 VVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYE 367
Query: 388 TMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMG 447
MV DI+TYN L+ GLCK+ + Q + L N P T++ I G
Sbjct: 368 DMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRK 427
Query: 448 SMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYR 507
+ + ELY MI G P+E T + L FC + + A ++L+EM ++ +
Sbjct: 428 NADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVH 487
Query: 508 CVILGLCKQRKVDIAIQALDLM 529
V GL Q K + + L M
Sbjct: 488 QVCNGLKHQGKDQLVKKLLQEM 509
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 132/272 (48%)
Query: 277 ALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIH 336
A + M G P + + N+ +S QG + + + PN T N ++
Sbjct: 187 ATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMS 246
Query: 337 SLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFP 396
G D ++L+ M T V+YN ++ G C+ GLL A+ L + M P
Sbjct: 247 GYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQP 306
Query: 397 DIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELY 456
++VT+NTL+ G C+ + E ++ + N +P VTYN I+G ++ G E A Y
Sbjct: 307 NVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFY 366
Query: 457 SEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQ 516
+M+ GI D +T+++L +G C + +A + +KE+ K++ + + +I+G C +
Sbjct: 367 EDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVR 426
Query: 517 RKVDIAIQALDLMVRSRCKPDEKIYDALIKAV 548
+ D + M+RS C P+E+ ++ L+ A
Sbjct: 427 KNADRGFELYKSMIRSGCHPNEQTFNMLVSAF 458
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 138/317 (43%), Gaps = 4/317 (1%)
Query: 183 GGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEA 242
G +P V +CN + L +G + A+ +M SP+ T N ++ G G ++
Sbjct: 198 GFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKG 257
Query: 243 VSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSF 302
+ +D R G ++Y LI C AL++ M G P+++T+N+L+
Sbjct: 258 IELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHG 317
Query: 303 TAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPT 362
+ +E V + + + PN VTYNTLI+ S G + E M
Sbjct: 318 FCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRD 377
Query: 363 RVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLY 422
+TYN ++ GLCK +A + E+ P+ T++ L+ G C D G +L
Sbjct: 378 ILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYK 437
Query: 423 LLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGF--CG 480
+ + C P T+N+ + R + A ++ EM+ + I D T + G G
Sbjct: 438 SMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQG 497
Query: 481 VDQLEEAMELLKEMHKK 497
DQL +LL+EM K
Sbjct: 498 KDQL--VKKLLQEMEGK 512
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 108/233 (46%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N ++ C +G L +A +L +M + P+ + LI G + ++ + K+ M
Sbjct: 277 NTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKA 336
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
P+ +T N +I G ++G + A EDM +G D +TYN +I G+ + +
Sbjct: 337 VNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRK 396
Query: 242 AVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVS 301
A F K+ ++ P T++ LI C A R E+ + M GC+P+ T+N LVS
Sbjct: 397 AAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVS 456
Query: 302 FTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIM 354
+ ++ V+ ++ R + ++ T + + + L G V +L+ M
Sbjct: 457 AFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 105/227 (46%)
Query: 331 YNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMV 390
+++L + + + D M + PT + N ++ L G +D A+ Y M
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 391 SESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSME 450
P+ T N ++SG C+ G +D+GI+LL + V+YN I G G +
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 451 SAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVI 510
SA +L + M G+ P+ +T ++L GFC +L+EA ++ EM + Y +I
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 511 LGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
G +Q ++A + + MV + + D Y+ALI + ++A
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKA 397
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 84/188 (44%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T N ++ C +L A+++ M + P+ + LI G + G + + M
Sbjct: 310 TFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDM 369
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
V +G D++T N +I GLCK+ + A V+++ P++ T++ +I G + N
Sbjct: 370 VCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNA 429
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
+ +K +R GC P T+ +L+ CR A +VL +M D T + +
Sbjct: 430 DRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQV 489
Query: 300 VSFTAKQG 307
+ QG
Sbjct: 490 CNGLKHQG 497
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 65/139 (46%), Gaps = 9/139 (6%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
++ D T N ++ LC + + AA+ ++ + +++ +P+ + + LI G D+G
Sbjct: 374 IQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGF 433
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
++ M+ SG P+ T NM++ C+ A ++ +M D+ T + + G+
Sbjct: 434 ELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGL 493
Query: 234 FDKGNFNEAVSFWKDQLRK 252
+G KDQL K
Sbjct: 494 KHQG---------KDQLVK 503
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 66/130 (50%)
Query: 431 PGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMEL 490
P + + N + L G ++ A Y EM I P+ T + + G+C +L++ +EL
Sbjct: 201 PTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIEL 260
Query: 491 LKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVAD 550
L++M + + +Y +I G C++ + A++ ++M +S +P+ ++ LI
Sbjct: 261 LQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCR 320
Query: 551 SGMVKEANDL 560
+ ++EA+ +
Sbjct: 321 AMKLQEASKV 330
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 149/322 (46%)
Query: 150 IPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVD 209
+P SC + L+ G++D + M P+ T NMV+ G C+ G L ++
Sbjct: 200 LPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIE 259
Query: 210 LVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVC 269
L++DM G ++YNT+I G +KG + A+ + G P ++T+ LI C
Sbjct: 260 LLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFC 319
Query: 270 RYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAV 329
R A +V +M P+ +TYN+L++ ++QG +E + +++ G+Q + +
Sbjct: 320 RAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDIL 379
Query: 330 TYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTM 389
TYN LI L ++ +++ + P T++ ++ G C DR LY +M
Sbjct: 380 TYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSM 439
Query: 390 VSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSM 449
+ C P+ T+N L+S C+ D Q+L + + T + +GL G
Sbjct: 440 IRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKD 499
Query: 450 ESAKELYSEMIGKGIVPDEITH 471
+ K+L EM GK + + +
Sbjct: 500 QLVKKLLQEMEGKKFLQESFNN 521
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 169/382 (44%), Gaps = 8/382 (2%)
Query: 153 FPSCTNLIRGLIKIGQIDKGCKIINIMVMS----GGVPDVITCNMVIGGLCKRGYLKSAV 208
F S +++R ++ G +D K+ + ++ S P V K+ ++A
Sbjct: 131 FKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKK--FRNAT 188
Query: 209 DLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELV 268
D M G P + N + + +G + A+ F+++ R P T +++
Sbjct: 189 DTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGY 248
Query: 269 CRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSR-GMQPN 327
CR + +E+L+DM G ++YN+L++ ++G+ L + N++ + G+QPN
Sbjct: 249 CRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSA-LKLKNMMGKSGLQPN 307
Query: 328 AVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYS 387
VT+NTLIH V M + P VTYN ++NG + G + A Y
Sbjct: 308 VVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYE 367
Query: 388 TMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMG 447
MV DI+TYN L+ GLCK+ + Q + L N P T++ I G
Sbjct: 368 DMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRK 427
Query: 448 SMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYR 507
+ + ELY MI G P+E T + L FC + + A ++L+EM ++ +
Sbjct: 428 NADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVH 487
Query: 508 CVILGLCKQRKVDIAIQALDLM 529
V GL Q K + + L M
Sbjct: 488 QVCNGLKHQGKDQLVKKLLQEM 509
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 132/272 (48%)
Query: 277 ALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIH 336
A + M G P + + N+ +S QG + + + PN T N ++
Sbjct: 187 ATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMS 246
Query: 337 SLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFP 396
G D ++L+ M T V+YN ++ G C+ GLL A+ L + M P
Sbjct: 247 GYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQP 306
Query: 397 DIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELY 456
++VT+NTL+ G C+ + E ++ + N +P VTYN I+G ++ G E A Y
Sbjct: 307 NVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFY 366
Query: 457 SEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQ 516
+M+ GI D +T+++L +G C + +A + +KE+ K++ + + +I+G C +
Sbjct: 367 EDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVR 426
Query: 517 RKVDIAIQALDLMVRSRCKPDEKIYDALIKAV 548
+ D + M+RS C P+E+ ++ L+ A
Sbjct: 427 KNADRGFELYKSMIRSGCHPNEQTFNMLVSAF 458
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 138/317 (43%), Gaps = 4/317 (1%)
Query: 183 GGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEA 242
G +P V +CN + L +G + A+ +M SP+ T N ++ G G ++
Sbjct: 198 GFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKG 257
Query: 243 VSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSF 302
+ +D R G ++Y LI C AL++ M G P+++T+N+L+
Sbjct: 258 IELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHG 317
Query: 303 TAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPT 362
+ +E V + + + PN VTYNTLI+ S G + E M
Sbjct: 318 FCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRD 377
Query: 363 RVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLY 422
+TYN ++ GLCK +A + E+ P+ T++ L+ G C D G +L
Sbjct: 378 ILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYK 437
Query: 423 LLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGF--CG 480
+ + C P T+N+ + R + A ++ EM+ + I D T + G G
Sbjct: 438 SMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQG 497
Query: 481 VDQLEEAMELLKEMHKK 497
DQL +LL+EM K
Sbjct: 498 KDQL--VKKLLQEMEGK 512
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 108/233 (46%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N ++ C +G L +A +L +M + P+ + LI G + ++ + K+ M
Sbjct: 277 NTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKA 336
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
P+ +T N +I G ++G + A EDM +G D +TYN +I G+ + +
Sbjct: 337 VNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRK 396
Query: 242 AVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVS 301
A F K+ ++ P T++ LI C A R E+ + M GC+P+ T+N LVS
Sbjct: 397 AAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVS 456
Query: 302 FTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIM 354
+ ++ V+ ++ R + ++ T + + + L G V +L+ M
Sbjct: 457 AFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 105/227 (46%)
Query: 331 YNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMV 390
+++L + + + D M + PT + N ++ L G +D A+ Y M
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 391 SESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSME 450
P+ T N ++SG C+ G +D+GI+LL + V+YN I G G +
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 451 SAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVI 510
SA +L + M G+ P+ +T ++L GFC +L+EA ++ EM + Y +I
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 511 LGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
G +Q ++A + + MV + + D Y+ALI + ++A
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKA 397
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 84/188 (44%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T N ++ C +L A+++ M + P+ + LI G + G + + M
Sbjct: 310 TFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDM 369
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
V +G D++T N +I GLCK+ + A V+++ P++ T++ +I G + N
Sbjct: 370 VCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNA 429
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
+ +K +R GC P T+ +L+ CR A +VL +M D T + +
Sbjct: 430 DRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQV 489
Query: 300 VSFTAKQG 307
+ QG
Sbjct: 490 CNGLKHQG 497
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 65/139 (46%), Gaps = 9/139 (6%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
++ D T N ++ LC + + AA+ ++ + +++ +P+ + + LI G D+G
Sbjct: 374 IQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGF 433
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
++ M+ SG P+ T NM++ C+ A ++ +M D+ T + + G+
Sbjct: 434 ELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGL 493
Query: 234 FDKGNFNEAVSFWKDQLRK 252
+G KDQL K
Sbjct: 494 KHQG---------KDQLVK 503
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 66/130 (50%)
Query: 431 PGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMEL 490
P + + N + L G ++ A Y EM I P+ T + + G+C +L++ +EL
Sbjct: 201 PTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIEL 260
Query: 491 LKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVAD 550
L++M + + +Y +I G C++ + A++ ++M +S +P+ ++ LI
Sbjct: 261 LQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCR 320
Query: 551 SGMVKEANDL 560
+ ++EA+ +
Sbjct: 321 AMKLQEASKV 330
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 202/443 (45%), Gaps = 18/443 (4%)
Query: 130 TRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPD-- 187
++ L ++ ++I I+ + HF + L L K+ Q + + + + GGV +
Sbjct: 76 SKHSLQSSWKMILILTKH---KHFKTAHQL---LDKLAQRELLSSPLVLRSLVGGVSEDP 129
Query: 188 -----VITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEA 242
V + M+ K G + ++ + E + G P ++ + + +
Sbjct: 130 EDVSHVFSWLMIY--YAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTV 187
Query: 243 VSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSF 302
+K ++ G + Y VL+ + +A ++L +M +G +PDI TYN+L+S
Sbjct: 188 WKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISV 247
Query: 303 TAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVL-EIMNETSSPP 361
K+ ++ E V + G+ PN VTYN+ IH S G + EI ++ ++
Sbjct: 248 YCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTA-- 305
Query: 362 TRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLL 421
VTY +++G C+ +D A+ L M S P +VTYN++L LC++G + E +LL
Sbjct: 306 NHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLL 365
Query: 422 YLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGV 481
++G P +T N I+ ++ M SA ++ +MI G+ D ++ +L GFC V
Sbjct: 366 TEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKV 425
Query: 482 DQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIY 541
+LE A E L M +K + Y ++ G Q K D + L+ + D +Y
Sbjct: 426 LELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALY 485
Query: 542 DALIKAVADSGMVKEANDLHQRL 564
LI+ + V A L + +
Sbjct: 486 RGLIRRICKLEQVDYAKVLFESM 508
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 191/443 (43%), Gaps = 3/443 (0%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPS--CTNLIRGLIKIGQIDKGCKIIN 177
T +++L L R L + L ++ S+ P S + L+ K G I+ +
Sbjct: 98 TAHQLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFE 157
Query: 178 IMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKG 237
+ G P + C +++ L K+ + + + M G + YN ++ G
Sbjct: 158 QIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSG 217
Query: 238 NFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYN 297
+ +A + KG P + TY LI + C+ AL V + M G P+I+TYN
Sbjct: 218 DPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYN 277
Query: 298 SLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNET 357
S + +++G E + + + N VTY TLI D + E+M
Sbjct: 278 SFIHGFSREGRMREATRLFRE-IKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESR 336
Query: 358 SSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEG 417
P VTYN +L LC+ G + A L + M + PD +T NTL++ CK +
Sbjct: 337 GFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSA 396
Query: 418 IQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWG 477
+++ + + + +Y I G ++ +E+AKE MI KG P T+S L G
Sbjct: 397 VKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDG 456
Query: 478 FCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPD 537
F ++ +E +LL+E K+ YR +I +CK +VD A + M + D
Sbjct: 457 FYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGD 516
Query: 538 EKIYDALIKAVADSGMVKEANDL 560
I+ + A +G V EA+ L
Sbjct: 517 SVIFTTMAYAYWRTGKVTEASAL 539
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 168/399 (42%), Gaps = 1/399 (0%)
Query: 151 PHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDL 210
PH +CT L+ L+K D KI MV G V ++ N+++ K G + A L
Sbjct: 166 PHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKL 225
Query: 211 VEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCR 270
+ +M G PD TYNT+I K EA+S R G P ++TY I R
Sbjct: 226 LSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSR 285
Query: 271 YCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVT 330
G +R L + + +TY +L+ + +E + + SRG P VT
Sbjct: 286 E-GRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVT 344
Query: 331 YNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMV 390
YN+++ L G + +L M+ P +T N ++N CK + A+ + M+
Sbjct: 345 YNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMI 404
Query: 391 SESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSME 450
D+ +Y L+ G CK ++ + L+ + SPG TY+ +DG +
Sbjct: 405 ESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQD 464
Query: 451 SAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVI 510
+L E +G+ D + L C ++Q++ A L + M KK + +
Sbjct: 465 EITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMA 524
Query: 511 LGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVA 549
+ KV A D+M R + K+Y ++ + A
Sbjct: 525 YAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSISASYA 563
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 134/272 (49%), Gaps = 1/272 (0%)
Query: 295 TYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIM 354
++ L+ + AK G+ ++ +V + S G++P+ L++SL D V + + M
Sbjct: 135 VFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKM 194
Query: 355 NETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFV 414
+ YN++++ KSG ++A L S M + FPDI TYNTL+S CK+
Sbjct: 195 VKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMH 254
Query: 415 DEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSL 474
E + + + + +P +VTYN I G +R G M A L+ E I + + +T+++L
Sbjct: 255 FEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTANHVTYTTL 313
Query: 475 AWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRC 534
G+C ++ ++EA+ L + M + Y ++ LC+ ++ A + L M +
Sbjct: 314 IDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKI 373
Query: 535 KPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
+PD + LI A + A + +++IE
Sbjct: 374 EPDNITCNTLINAYCKIEDMVSAVKVKKKMIE 405
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 5/235 (2%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T N IL+ LC GR+ A RL+ M+ K P +C LI KI + K+ M
Sbjct: 344 TYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKM 403
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
+ SG D+ + +I G CK L++A + + M G SP TY+ ++ G +++
Sbjct: 404 IESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQ 463
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
+E ++ ++G + Y LI +C+ A + E M +G D + + ++
Sbjct: 464 DEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTM 523
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHG-----YWDGVDD 349
+ G E + + +R + N Y ++ S + +W V D
Sbjct: 524 AYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSISASYAGDNDVLRFFWSHVGD 578
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 134/242 (55%)
Query: 258 LITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVIS 317
++ T +++ +C+ I A + +M +G +P+++TYN ++ G + + ++
Sbjct: 10 VVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLR 69
Query: 318 NLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSG 377
+++ + + P+ VT++ LI++ +++ + M S PT +TYN M++G CK
Sbjct: 70 HMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQD 129
Query: 378 LLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYN 437
+D A + +M S+ C PD+VT++TL++G CK VD G+++ + VTY
Sbjct: 130 RVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYT 189
Query: 438 IAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKK 497
I G ++G +++A++L +EMI G+ PD IT + G C +L +A +L+++ K
Sbjct: 190 TLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKS 249
Query: 498 DE 499
++
Sbjct: 250 ED 251
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 128/243 (52%)
Query: 291 PDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDV 350
D++ ++V K G + + + + +G+ PN +TYN +I S G W D +
Sbjct: 8 ADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQL 67
Query: 351 LEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCK 410
L M E P VT++ ++N K + A +Y M+ S FP +TYN+++ G CK
Sbjct: 68 LRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCK 127
Query: 411 EGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEIT 470
+ VD+ ++L + CSP +VT++ I+G + +++ E++ EM +GIV + +T
Sbjct: 128 QDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVT 187
Query: 471 HSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMV 530
+++L GFC V L+ A +LL EM + + C++ GLC ++++ A L+ +
Sbjct: 188 YTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQ 247
Query: 531 RSR 533
+S
Sbjct: 248 KSE 250
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 122/241 (50%), Gaps = 10/241 (4%)
Query: 186 PDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSF 245
DV+ ++ LCK G +A +L +M G P+ +TYN +I G +++A
Sbjct: 8 ADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQL 67
Query: 246 WKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAK 305
+ + K P ++T++ LI + A E+ ++M +P ITYNS++ K
Sbjct: 68 LRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCK 127
Query: 306 QGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDG--VDDVLEI---MNETSSP 360
Q ++ ++ ++ S+G P+ VT++TLI +GY VD+ +EI M+
Sbjct: 128 QDRVDDAKRMLDSMASKGCSPDVVTFSTLI-----NGYCKAKRVDNGMEIFCEMHRRGIV 182
Query: 361 PTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQL 420
VTY +++G C+ G LD A L + M+S PD +T++ +L+GLC + + + +
Sbjct: 183 ANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAI 242
Query: 421 L 421
L
Sbjct: 243 L 243
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 106/229 (46%)
Query: 157 TNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSL 216
T ++ L K G + M G P+V+T N +I C G A L+ M
Sbjct: 14 TAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIE 73
Query: 217 SGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIR 276
+PD +T++ +I + +EA +K+ LR P ITY +I+ C+
Sbjct: 74 KQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDD 133
Query: 277 ALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIH 336
A +L+ MA +GC PD++T+++L++ K + + + RG+ N VTY TLIH
Sbjct: 134 AKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIH 193
Query: 337 SLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISL 385
G D D+L M P +T++ ML GLC L +A ++
Sbjct: 194 GFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAI 242
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 108/234 (46%)
Query: 324 MQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAI 383
++ + V ++ L G ++ M+E P +TYN M++ C SG A
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 384 SLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGL 443
L M+ + PDIVT++ L++ KE V E ++ + + P +TYN IDG
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 444 ARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKH 503
+ ++ AK + M KG PD +T S+L G+C +++ ME+ EMH++
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
Query: 504 TAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
Y +I G C+ +D A L+ M+ PD + ++ + +++A
Sbjct: 186 VTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKA 239
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 109/246 (44%)
Query: 214 MSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCG 273
M S D + I+ + GN A + + + KG P ++TY +I+ C
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 274 AIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNT 333
A ++L M + PDI+T+++L++ K+ E + +L + P +TYN+
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 334 LIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSES 393
+I D +L+ M P VT++ ++NG CK+ +D + ++ M
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 394 CFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAK 453
+ VTY TL+ G C+ G +D LL + +P +T++ + GL + A
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAF 240
Query: 454 ELYSEM 459
+ ++
Sbjct: 241 AILEDL 246
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%)
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
M ++ V +++ LCK G A +L++ M + FP+++TYN ++ C G
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSS 473
+ QLL + +P +VT++ I+ + + A+E+Y EM+ I P IT++S
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 474 LAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSR 533
+ GFC D++++A +L M K + +I G CK ++VD ++ M R
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 534 CKPDEKIYDALIKAVADSGMVKEANDLHQRLI 565
+ Y LI G + A DL +I
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMI 212
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 96/201 (47%)
Query: 119 FTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINI 178
T N ++ + C GR A +L+ M K P + + LI +K ++ + +I
Sbjct: 46 LTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKE 105
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN 238
M+ P IT N +I G CK+ + A +++ M+ GCSPD +T++T+I G
Sbjct: 106 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 165
Query: 239 FNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNS 298
+ + + + R+G +TYT LI C+ A ++L +M G PD IT++
Sbjct: 166 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 225
Query: 299 LVSFTAKQGVYEETYLVISNL 319
+++ + + + ++ +L
Sbjct: 226 MLAGLCSKKELRKAFAILEDL 246
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 102/227 (44%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
++ D + I+ LC G + A L M K P+ + +I G+
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
+++ M+ PD++T + +I K + A ++ ++M P ITYN++I G
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
+ ++A KGC P ++T++ LI C+ +E+ +M G +
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSS 340
+TY +L+ + G + +++ ++S G+ P+ +T++ ++ L S
Sbjct: 186 VTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 232
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 78/168 (46%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T + ++ ++ A + + M R S P + ++I G K ++D +++
Sbjct: 79 DIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRML 138
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
+ M G PDV+T + +I G CK + + +++ +M G + +TY T+I G
Sbjct: 139 DSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQV 198
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDM 284
G+ + A + + G P IT+ ++ +C +A +LED+
Sbjct: 199 GDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 50/101 (49%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T + ++ C R+ + M R+ + + + T LI G ++G +D ++
Sbjct: 149 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 208
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLS 217
N M+ G PD IT + ++ GLC + L+ A ++ED+ S
Sbjct: 209 NEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKS 249
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 152/342 (44%), Gaps = 35/342 (10%)
Query: 124 ILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSG 183
++ NL + R A + + + + P TNL+RG + G+I + K+ M ++G
Sbjct: 227 VISNLSRKRRASEAQSFFDSLKDRFE-PDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAG 285
Query: 184 GVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAV 243
P+V T ++VI LC+ G + A D+ DM SGC+P+AIT+N ++R G + +
Sbjct: 286 IEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVL 345
Query: 244 SFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFT 303
+ + GC P ITY LIE CR A++VL M + C + T+N++ +
Sbjct: 346 QVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYI 405
Query: 304 AKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTR 363
K+ + + S ++ +PN VTYN L+ D V + + M++ P
Sbjct: 406 EKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNV 465
Query: 364 VTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYL 423
TY +++ C G + A L+ MV E C
Sbjct: 466 NTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCL---------------------------- 497
Query: 424 LTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIV 465
+P L Y + + L R G ++ +EL +MI KG+V
Sbjct: 498 ------TPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLV 533
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 153/330 (46%), Gaps = 1/330 (0%)
Query: 165 KIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAI 224
K+ Q D +I++M + T ++I + G AV M GC PD I
Sbjct: 163 KVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKI 222
Query: 225 TYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDM 284
++ +I + K +EA SF+ D L+ P +I YT L+ CR A +V ++M
Sbjct: 223 AFSIVISNLSRKRRASEAQSFF-DSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEM 281
Query: 285 AMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYW 344
+ G P++ TY+ ++ + G + V +++L G PNA+T+N L+ G
Sbjct: 282 KLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRT 341
Query: 345 DGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTL 404
+ V V M + P +TYN ++ C+ L+ A+ + +TM+ + C + T+NT+
Sbjct: 342 EKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTI 401
Query: 405 LSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGI 464
+ K+ V+ ++ + C P VTYNI + S + ++ EM K +
Sbjct: 402 FRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEV 461
Query: 465 VPDEITHSSLAWGFCGVDQLEEAMELLKEM 494
P+ T+ L FCG+ A +L KEM
Sbjct: 462 EPNVNTYRLLVTMFCGMGHWNNAYKLFKEM 491
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 166/363 (45%), Gaps = 4/363 (1%)
Query: 137 AARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIG 196
A LI++M ++ + T LIR ++ G + N M G VPD I ++VI
Sbjct: 170 AWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVIS 229
Query: 197 GLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPP 256
L ++ A + + PD I Y ++RG G +EA +K+ G P
Sbjct: 230 NLSRKRRASEAQSFFDSLK-DRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEP 288
Query: 257 YLITYTVLIELVCRYCGAI-RALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLV 315
+ TY+++I+ +CR CG I RA +V DM GC P+ IT+N+L+ K G E+ V
Sbjct: 289 NVYTYSIVIDALCR-CGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQV 347
Query: 316 ISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCK 375
+ + G +P+ +TYN LI + + VL M + T+N + + K
Sbjct: 348 YNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEK 407
Query: 376 SGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVT 435
++ A +YS M+ C P+ VTYN L+ D +++ + P + T
Sbjct: 408 KRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNT 467
Query: 436 YNIAIDGLARMGSMESAKELYSEMI-GKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEM 494
Y + + MG +A +L+ EM+ K + P + + QL++ EL+++M
Sbjct: 468 YRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKM 527
Query: 495 HKK 497
+K
Sbjct: 528 IQK 530
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 158/343 (46%), Gaps = 2/343 (0%)
Query: 225 TYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDM 284
T+ +IR G +EAV + GC P I ++++I + R A A + +
Sbjct: 188 TFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSL 247
Query: 285 AMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYW 344
+ PD+I Y +LV + G E V + G++PN TY+ +I +L G
Sbjct: 248 K-DRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQI 306
Query: 345 DGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTL 404
DV M ++ P +T+N ++ K+G ++ + +Y+ M C PD +TYN L
Sbjct: 307 SRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFL 366
Query: 405 LSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGI 464
+ C++ ++ +++L + C T+N + + + A +YS+M+
Sbjct: 367 IEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKC 426
Query: 465 VPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQ 524
P+ +T++ L F G + +++ KEM K+ + YR ++ C + A +
Sbjct: 427 EPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYK 486
Query: 525 ALDLMVRSRC-KPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
MV +C P +Y+ ++ + +G +K+ +L +++I+
Sbjct: 487 LFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQ 529
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 129/273 (47%), Gaps = 1/273 (0%)
Query: 296 YNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMN 355
YN ++ + K ++ + +I + SR ++ + T+ LI G M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 356 ETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVD 415
+ P ++ ++I+++ L + A S + ++ + PD++ Y L+ G C+ G +
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEIS 272
Query: 416 EGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLA 475
E ++ + P + TY+I ID L R G + A +++++M+ G P+ IT ++L
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332
Query: 476 WGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCK 535
+ E+ +++ +M K + Y +I C+ ++ A++ L+ M++ +C+
Sbjct: 333 RVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCE 392
Query: 536 PDEKIYDALIKAVADSGMVKEANDLHQRLIEWK 568
+ ++ + + + V A+ ++ +++E K
Sbjct: 393 VNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAK 425
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 109/237 (45%), Gaps = 1/237 (0%)
Query: 119 FTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINI 178
+T + ++ LC G++ A + M P+ + NL+R +K G+ +K ++ N
Sbjct: 291 YTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQ 350
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN 238
M G PD IT N +I C+ L++AV ++ M C +A T+NTI R + K +
Sbjct: 351 MKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRD 410
Query: 239 FNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNS 298
N A + + C P +TY +L+ + L++ ++M + P++ TY
Sbjct: 411 VNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRL 470
Query: 299 LVSFTAKQGVYEETYLVISNLL-SRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIM 354
LV+ G + Y + ++ + + P+ Y ++ L G ++++E M
Sbjct: 471 LVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKM 527
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 181/384 (47%), Gaps = 10/384 (2%)
Query: 186 PDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSF 245
P V N+V+ + + A L ++M +PD TY+T+I +G F+ A+S+
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 246 WKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAK 305
+ + L+ Y+ LIEL R C +A+ + + G PD++ YNS+++ K
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 272
Query: 306 QGVYEETYLVISNLLSRGMQPNAVTYNTLIH-SLSSHGYWDGVDDVLEIMNETSSPPTRV 364
++ E L+I + G+ PN V+Y+TL+ + +H + + + V M E +
Sbjct: 273 AKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEAL-SVFAEMKEVNCALDLT 331
Query: 365 TYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLL 424
T NIM++ + ++ A L+ ++ P++V+YNT+L + E I L L+
Sbjct: 332 TCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLM 391
Query: 425 TGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSL--AWGFCGVD 482
+ +VTYN I + E A L EM +GI P+ IT+S++ WG G
Sbjct: 392 QRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAG-- 449
Query: 483 QLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYD 542
+L+ A L +++ +I Y+ +I+ +V + A L+ + PD +
Sbjct: 450 KLDRAATLFQKLRSSGVEIDQVLYQTMIVAY---ERVGLMGHAKRLLHELKL-PDNIPRE 505
Query: 543 ALIKAVADSGMVKEANDLHQRLIE 566
I +A +G +EA + ++ E
Sbjct: 506 TAITILAKAGRTEEATWVFRQAFE 529
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/451 (22%), Positives = 189/451 (41%), Gaps = 10/451 (2%)
Query: 119 FTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINI 178
F N +L+N+ + A L + M +++ P + + LI K G D +
Sbjct: 156 FAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQK 215
Query: 179 MVMSGGVPDVITCNMVIGGLCKR--GYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
M D++ + +I L +R Y K A+ + + SG +PD + YN++I
Sbjct: 216 MEQDRVSGDLVLYSNLIE-LSRRLCDYSK-AISIFSRLKRSGITPDLVAYNSMINVYGKA 273
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
F EA K+ G P ++Y+ L+ + + AL V +M C D+ T
Sbjct: 274 KLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTC 333
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
N ++ + + +E + +L ++PN V+YNT++ + + +M
Sbjct: 334 NIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQR 393
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDE 416
VTYN M+ K+ ++A +L M S P+ +TY+T++S K G +D
Sbjct: 394 KDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDR 453
Query: 417 GIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAW 476
L L + V Y I R+G M AK L E+ +PD I +
Sbjct: 454 AATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHEL----KLPDNIPRETAIT 509
Query: 477 GFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVI-LGLCKQRKVDIAIQALDLMVRSRCK 535
+ EEA + ++ + E + + C+I L QR V++ I+ + M +
Sbjct: 510 ILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNV-IEVFEKMRTAGYF 568
Query: 536 PDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
PD + ++ A ++A+ +++ + E
Sbjct: 569 PDSNVIAMVLNAYGKQREFEKADTVYREMQE 599
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 156/351 (44%), Gaps = 4/351 (1%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D +T + ++ + G +A ++ M + +NLI ++ K I
Sbjct: 189 DRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIF 248
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
+ + SG PD++ N +I K + A L+++M+ +G P+ ++Y+T++ +
Sbjct: 249 SRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVEN 308
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
F EA+S + + C L T ++I++ + A + + P++++Y
Sbjct: 309 HKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSY 368
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
N+++ + ++ E + + + ++ N VTYNT+I + ++++ M
Sbjct: 369 NTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQS 428
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDE 416
P +TY+ +++ K+G LDRA +L+ + S D V Y T++ + G +
Sbjct: 429 RGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGH 488
Query: 417 GIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPD 467
+LL+ L P + AI LA+ G E A ++ + G V D
Sbjct: 489 AKRLLHELK----LPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKD 535
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 103/242 (42%), Gaps = 6/242 (2%)
Query: 334 LIHSLSSHGYWDGVDDVLEIMNETSS-PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSE 392
++ LS W +L+ ++E + P+ YN++L + ++ D A L+ M
Sbjct: 125 MVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQR 184
Query: 393 SCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESA 452
+ PD TY+TL++ KEG D + L + S LV Y+ I+ R+ A
Sbjct: 185 ALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKA 244
Query: 453 KELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILG 512
++S + GI PD + ++S+ + EA L+KEM++ +Y ++
Sbjct: 245 ISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSV 304
Query: 513 LCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKILKT 572
+ K A+ M C D + +I MVKEA+ L W + K
Sbjct: 305 YVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLF-----WSLRKM 359
Query: 573 EI 574
+I
Sbjct: 360 DI 361
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 178/388 (45%), Gaps = 3/388 (0%)
Query: 113 FVRNDGFTNN-KILQNLCTRGRLMAAARLIEIMA--RKSQIPHFPSCTNLIRGLIKIGQI 169
F+RND +QNL + +++++ K+ +P S + +I L+K ++
Sbjct: 396 FIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKV 455
Query: 170 DKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTI 229
D +++ +V +G +P + N +I G+CK G + ++ L+ +M +G P T N I
Sbjct: 456 DMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCI 515
Query: 230 IRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGC 289
+ ++ +F A+ K G P++ T L++ +C A+ A + L+D+A EG
Sbjct: 516 YGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGF 575
Query: 290 YPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDD 349
++ + + K + + ++ + G P+ + Y+ LI +L D
Sbjct: 576 LGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADI 635
Query: 350 VLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLC 409
+ M PT TYN M++G CK G +DR +S M + PD++TY +L+ GLC
Sbjct: 636 LFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLC 695
Query: 410 KEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEI 469
G E I + G +C P +T+ I GL + G A + EM K + PD
Sbjct: 696 ASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSA 755
Query: 470 THSSLAWGFCGVDQLEEAMELLKEMHKK 497
+ SL F + + + +EM K
Sbjct: 756 VYLSLVSSFLSSENINAGFGIFREMVHK 783
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 155/343 (45%)
Query: 124 ILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSG 183
++ L ++ A L+ + + IP N+I G+ K G+ ++ K++ M +G
Sbjct: 445 VINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAG 504
Query: 184 GVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAV 243
P T N + G L +R A+DL++ M G P +++ + + G +A
Sbjct: 505 VEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDAC 564
Query: 244 SFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFT 303
+ D +G +++ T I+ + + G R LE+ D+ G PD+I Y+ L+
Sbjct: 565 KYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKAL 624
Query: 304 AKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTR 363
K E ++ + ++S+G++P TYN++I G D + M E P
Sbjct: 625 CKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDV 684
Query: 364 VTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYL 423
+TY +++GLC SG AI ++ M + C+P+ +T+ L+ GLCK G+ E +
Sbjct: 685 ITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFRE 744
Query: 424 LTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVP 466
+ P Y + ++ + ++ EM+ KG P
Sbjct: 745 MEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFP 787
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/485 (21%), Positives = 199/485 (41%), Gaps = 51/485 (10%)
Query: 124 ILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSG 183
++ + C G++ A LIE++ + ++ + LI G +K +IDK ++ M G
Sbjct: 254 LVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMG 313
Query: 184 GVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPD--------------------- 222
D+ +++IGGLCK L+ A+ L ++ SG PD
Sbjct: 314 MNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRIT 373
Query: 223 ------------AITYNTIIRGMFDKGNFNEAVSFWKDQL------------------RK 252
+ Y ++ G +EA SF ++ + K
Sbjct: 374 EVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNK 433
Query: 253 GCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEET 312
P + +++I + + A+ +L D+ G P + YN+++ K+G EE+
Sbjct: 434 AILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEES 493
Query: 313 YLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNG 372
++ + G++P+ T N + L+ + G D+L+ M P ++
Sbjct: 494 LKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKK 553
Query: 373 LCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPG 432
LC++G A + E +V + GL K VD G++L + P
Sbjct: 554 LCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPD 613
Query: 433 LVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLK 492
++ Y++ I L + A L++EM+ KG+ P T++S+ G+C +++ + +
Sbjct: 614 VIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIV 673
Query: 493 EMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSG 552
M++ ++ Y +I GLC + AI + M C P+ + ALI+ + G
Sbjct: 674 RMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCG 733
Query: 553 MVKEA 557
EA
Sbjct: 734 WSGEA 738
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 103/449 (22%), Positives = 193/449 (42%), Gaps = 22/449 (4%)
Query: 135 MAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMV 194
+ ARL E+ F + T +++ G+ ++ + N ++ G + + I+ +V
Sbjct: 197 LVEARLKEMRDCGFHFDKF-TLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHISTILV 255
Query: 195 IGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGC 254
+ CK G + A +L+E + + TY +I G + ++A ++ R G
Sbjct: 256 VS-FCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGM 314
Query: 255 PPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI-ITYNSLVSFTAKQGVYEETY 313
+ Y VLI +C++ AL + ++ G PD I L SF+ + + T
Sbjct: 315 NADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITE 374
Query: 314 LVISNL-----------LSRGMQPNAVTYN--TLIHSLSSHGYWDGVDDVLEIMNETSSP 360
++I ++ L G N + + + I +L + DGV ++++++ + +
Sbjct: 375 VIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKA 434
Query: 361 --PTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGI 418
P + +I++N L K+ +D A++L +V P + YN ++ G+CKEG +E +
Sbjct: 435 ILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESL 494
Query: 419 QLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSS-LAWG 477
+LL + P T N LA A +L +M G P I H++ L
Sbjct: 495 KLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEP-WIKHTTFLVKK 553
Query: 478 FCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQAL-DLMVRSRCKP 536
C + +A + L ++ + A I GL K VD ++ D+ C P
Sbjct: 554 LCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHC-P 612
Query: 537 DEKIYDALIKAVADSGMVKEANDLHQRLI 565
D Y LIKA+ + EA+ L ++
Sbjct: 613 DVIAYHVLIKALCKACRTMEADILFNEMV 641
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 118/535 (22%), Positives = 212/535 (39%), Gaps = 80/535 (14%)
Query: 72 QGSAVIDRVNEVD-------HEDWGLESFERRESG--ELVDPG-KPVKPPPFVRNDGFTN 121
+ S+V DRV E+ + LE+ + S ELV+ K ++ F D FT
Sbjct: 159 EASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGF-HFDKFTL 217
Query: 122 NKILQNLCTRGRLMAAARLI-EIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMV 180
+LQ C G+ A + EI++R H T L+ K GQ+DK ++I ++
Sbjct: 218 TPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS--TILVVSFCKWGQVDKAFELIEMLE 275
Query: 181 MSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFN 240
+ T ++I G K + A L E M G + D Y+ +I G+ +
Sbjct: 276 ERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLE 335
Query: 241 EAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLE----DMAMEGCYPDIITY 296
A+S + + R G PP +L +L+C + + E D+ + ++ Y
Sbjct: 336 MALSLYLEIKRSGIPP---DRGILGKLLCSFSEESELSRITEVIIGDIDKKSV---MLLY 389
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
SL + + E Y I NL+ Y + DGV ++++++ +
Sbjct: 390 KSLFEGFIRNDLVHEAYSFIQNLMG--------NYES-----------DGVSEIVKLLKD 430
Query: 357 TSSP--PTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFV 414
+ P + +I++N L K+ +D A++L +V P + YN ++ G+CKEG
Sbjct: 431 HNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRS 490
Query: 415 DEGIQLLYLLTGTNCSPGLVTYNI-------------AIDGLARM--------------- 446
+E ++LL + P T N A+D L +M
Sbjct: 491 EESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFL 550
Query: 447 -------GSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDE 499
G A + ++ G+G + + ++ G + ++ +EL +++
Sbjct: 551 VKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGH 610
Query: 500 KIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMV 554
AY +I LCK + A + MV KP Y+++I G +
Sbjct: 611 CPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEI 665
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 110/259 (42%), Gaps = 39/259 (15%)
Query: 112 PFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDK 171
P++++ F +++ LC GR + A + ++ +A + + H + T I GLIK +D+
Sbjct: 542 PWIKHTTF----LVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDR 597
Query: 172 G--------------------------CK---------IINIMVMSGGVPDVITCNMVIG 196
G CK + N MV G P V T N +I
Sbjct: 598 GLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMID 657
Query: 197 GLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPP 256
G CK G + + + M +PD ITY ++I G+ G +EA+ W + K C P
Sbjct: 658 GWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYP 717
Query: 257 YLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVI 316
IT+ LI+ +C+ + AL +M + PD Y SLVS + +
Sbjct: 718 NRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIF 777
Query: 317 SNLLSRGMQPNAVTYNTLI 335
++ +G P +V N ++
Sbjct: 778 REMVHKGRFPVSVDRNYML 796
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 6/230 (2%)
Query: 270 RYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGM-QPNA 328
R +++AL V D+ C+ + + G+ +E V + G+ PNA
Sbjct: 120 RQNASLKALVV--DVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNA 177
Query: 329 VTYNTLIHSLS--SHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLY 386
TYN L+ ++S + + V+ L+ M + + T +L C +G +RA+S++
Sbjct: 178 YTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVF 237
Query: 387 STMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARM 446
+ ++S + ++ L+ CK G VD+ +L+ +L + TY + I G +
Sbjct: 238 NEILSRGWLDEHIS-TILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKE 296
Query: 447 GSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHK 496
++ A +L+ +M G+ D + L G C LE A+ L E+ +
Sbjct: 297 SRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKR 346
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 84/184 (45%), Gaps = 4/184 (2%)
Query: 365 TYNIMLNGLCKSGLLDRAISLYSTMVSES-CFPDIVTYNTLLSGLCKEGFVDEGIQLLYL 423
+ + L +GL+D A S++ + C P+ TYN LL + K + L
Sbjct: 143 AFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARL 202
Query: 424 LTGTNCSPGLVTYNI--AIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGV 481
+C + + + G E A +++E++ +G + DE + L FC
Sbjct: 203 KEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWL-DEHISTILVVSFCKW 261
Query: 482 DQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIY 541
Q+++A EL++ + ++D ++ + Y +I G K+ ++D A Q + M R D +Y
Sbjct: 262 GQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALY 321
Query: 542 DALI 545
D LI
Sbjct: 322 DVLI 325
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 194/434 (44%), Gaps = 11/434 (2%)
Query: 139 RLIEIMARKSQIPHFPSCTN-LIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGG 197
R + +K + P S N LI+ K+G +++ + M +G P + T N ++ G
Sbjct: 172 RFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNG 231
Query: 198 LCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPY 257
L ++ SA + E M PD +TYNT+I+G G +A+ +D +G
Sbjct: 232 LVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEAD 291
Query: 258 LITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVIS 317
ITY +I+ + + ++M +G ++ ++ K+G E Y V
Sbjct: 292 KITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFE 351
Query: 318 NLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSG 377
N++ +G +PN Y LI + G + +L M + P VTY++++NGLCK+G
Sbjct: 352 NMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNG 411
Query: 378 LLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYN 437
++ A+ + T + + + Y++L+ GL K G VDE +L ++ C+ YN
Sbjct: 412 RVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYN 471
Query: 438 IAIDGLARMGSMESAKELYSEM-IGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHK 496
ID + ++ A L+ M +G T++ L G + EEA++L M
Sbjct: 472 ALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMID 531
Query: 497 KDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDA----LIKAVADSG 552
K +R + GLC KV A + LD + P I DA +I + +G
Sbjct: 532 KGITPTAACFRALSTGLCLSGKVARACKILDELA-----PMGVILDAACEDMINTLCKAG 586
Query: 553 MVKEANDLHQRLIE 566
+KEA L + E
Sbjct: 587 RIKEACKLADGITE 600
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 182/409 (44%), Gaps = 2/409 (0%)
Query: 119 FTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINI 178
+T N ++ L + + +A R+ E+M P + +I+G K GQ K + +
Sbjct: 223 YTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRD 282
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN 238
M G D IT +I S V L ++M G ++ +I G+ +G
Sbjct: 283 METRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGK 342
Query: 239 FNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNS 298
NE + +++ +RKG P + YTVLI+ + A+ +L M EG PD++TY+
Sbjct: 343 LNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSV 402
Query: 299 LVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETS 358
+V+ K G EE G+ N++ Y++LI L G D + + E M+E
Sbjct: 403 VVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKG 462
Query: 359 SPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSES-CFPDIVTYNTLLSGLCKEGFVDEG 417
YN +++ K +D AI+L+ M E C + TY LLSG+ KE +E
Sbjct: 463 CTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEA 522
Query: 418 IQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWG 477
++L ++ +P + GL G + A ++ E+ G++ D +
Sbjct: 523 LKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMIN-T 581
Query: 478 FCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQAL 526
C +++EA +L + ++ ++ +I L K K D+A++ +
Sbjct: 582 LCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLM 630
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 111/240 (46%)
Query: 327 NAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLY 386
N Y +L+ L+ D + V + + P T N ++ K G+++ + ++
Sbjct: 151 NLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVW 210
Query: 387 STMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARM 446
M P + TYN L++GL FVD ++ ++ P +VTYN I G +
Sbjct: 211 RKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKA 270
Query: 447 GSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAY 506
G + A E +M +G D+IT+ ++ + L +EM +K ++ A+
Sbjct: 271 GQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAF 330
Query: 507 RCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
VI GLCK+ K++ + M+R KP+ IY LI A SG V++A L R+I+
Sbjct: 331 SLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMID 390
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 150/303 (49%), Gaps = 3/303 (0%)
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
+++N+MV +G PD +T ++ + LC+ G + A DL+++++ PD TYN +++ +
Sbjct: 145 RVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHL 204
Query: 234 FDKGNFNEAVSFWKDQLRKG--CPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYP 291
+ + F D++R P L+++T+LI+ VC A+ ++ + G P
Sbjct: 205 CKCKDLHVVYEFV-DEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKP 263
Query: 292 DIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVL 351
D YN+++ E V + G++P+ +TYNTLI LS G + L
Sbjct: 264 DCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYL 323
Query: 352 EIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKE 411
+ M + P TY ++NG+C+ G A+SL M + C P+ TYNTLL GLCK
Sbjct: 324 KTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKA 383
Query: 412 GFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITH 471
+D+G++L ++ + Y + L + G + A E++ + + D +
Sbjct: 384 RLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAY 443
Query: 472 SSL 474
S+L
Sbjct: 444 STL 446
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 141/345 (40%), Gaps = 42/345 (12%)
Query: 217 SGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIR 276
+G PD +T + +R + + G +EA K+ K PP TY L++ +C+
Sbjct: 153 NGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHV 212
Query: 277 ALEVLEDMAME-GCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLI 335
E +++M + PD++++ L+ E ++S L + G +P+ YNT+
Sbjct: 213 VYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTI- 271
Query: 336 HSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCF 395
+ G C A+ +Y M E
Sbjct: 272 ----------------------------------MKGFCTLSKGSEAVGVYKKMKEEGVE 297
Query: 396 PDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKEL 455
PD +TYNTL+ GL K G V+E L + P TY ++G+ R G A L
Sbjct: 298 PDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSL 357
Query: 456 YSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCK 515
EM +G P++ T+++L G C +++ MEL + M K++ Y ++ L K
Sbjct: 358 LEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVK 417
Query: 516 QRKVDIAIQALDLMVRSRCKPDEKIYDAL------IKAVADSGMV 554
KV A + D V S+ D Y L +K + G+V
Sbjct: 418 SGKVAEAYEVFDYAVDSKSLSDASAYSTLETTLKWLKKAKEQGLV 462
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 160/357 (44%), Gaps = 11/357 (3%)
Query: 222 DAITYNTIIRGMFDKGNFNEAVSFWKDQLRK--GCPPYLITYTVLIELVCRYCGAI--RA 277
D +N++++ N+ V ++ L+ P T+ +L+ CR +
Sbjct: 84 DLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNV 143
Query: 278 LEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHS 337
VL M G PD +T + V + G +E ++ L + P+ TYN L+
Sbjct: 144 HRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKH 203
Query: 338 LSS----HGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSES 393
L H ++ VD E+ ++ P V++ I+++ +C S L A+ L S + +
Sbjct: 204 LCKCKDLHVVYEFVD---EMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAG 260
Query: 394 CFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAK 453
PD YNT++ G C E + + + P +TYN I GL++ G +E A+
Sbjct: 261 FKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEAR 320
Query: 454 ELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGL 513
M+ G PD T++SL G C + A+ LL+EM + Y ++ GL
Sbjct: 321 MYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGL 380
Query: 514 CKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKIL 570
CK R +D ++ ++M S K + Y L++++ SG V EA ++ ++ K L
Sbjct: 381 CKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSL 437
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 129/284 (45%), Gaps = 1/284 (0%)
Query: 139 RLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGL 198
R++ +M P + +R L + G++D+ ++ + PD T N ++ L
Sbjct: 145 RVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHL 204
Query: 199 CKRGYLKSAVDLVEDMSLS-GCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPY 257
CK L + V++M PD +++ +I + + N EA+ G P
Sbjct: 205 CKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPD 264
Query: 258 LITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVIS 317
Y +++ C A+ V + M EG PD ITYN+L+ +K G EE + +
Sbjct: 265 CFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLK 324
Query: 318 NLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSG 377
++ G +P+ TY +L++ + G G +LE M P TYN +L+GLCK+
Sbjct: 325 TMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKAR 384
Query: 378 LLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLL 421
L+D+ + LY M S + Y TL+ L K G V E ++
Sbjct: 385 LMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVF 428
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 132/293 (45%), Gaps = 1/293 (0%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T + +++LC GR+ A L++ + K P + L++ L K + + +
Sbjct: 158 DQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFV 217
Query: 177 NIMVMSGGV-PDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFD 235
+ M V PD+++ ++I +C L+ A+ LV + +G PD YNTI++G
Sbjct: 218 DEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCT 277
Query: 236 KGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIIT 295
+EAV +K +G P ITY LI + + A L+ M G PD T
Sbjct: 278 LSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTAT 337
Query: 296 YNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMN 355
Y SL++ ++G ++ + +RG PN TYNTL+H L D ++ E+M
Sbjct: 338 YTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMK 397
Query: 356 ETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGL 408
+ Y ++ L KSG + A ++ V D Y+TL + L
Sbjct: 398 SSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTLETTL 450
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 183/433 (42%), Gaps = 2/433 (0%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T + ++ G+ A L++ M R + P + NLI G + ++
Sbjct: 177 DAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVC 236
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
M +G PD++T N+V+ A+ E M + PD T+N II +
Sbjct: 237 KKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKL 296
Query: 237 GNFNEAVSFWKD--QLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDII 294
G ++A+ + + R C P ++T+T ++ L V E M EG P+I+
Sbjct: 297 GQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIV 356
Query: 295 TYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIM 354
+YN+L+ A G+ V+ ++ G+ P+ V+Y L++S +V +M
Sbjct: 357 SYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMM 416
Query: 355 NETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFV 414
+ P VTYN +++ +G L A+ ++ M + P++V+ TLL+ +
Sbjct: 417 RKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKK 476
Query: 415 DEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSL 474
+L + YN AI +E A LY M K + D +T + L
Sbjct: 477 VNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTIL 536
Query: 475 AWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRC 534
G C + + EA+ LKEM + Y V+ KQ +V A + M + C
Sbjct: 537 ISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGC 596
Query: 535 KPDEKIYDALIKA 547
+PD Y +++ A
Sbjct: 597 EPDVIAYTSMLHA 609
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 160/390 (41%), Gaps = 8/390 (2%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQ--IPHFPSCTNLIRGLIKIGQIDK 171
VR D T N I+ L G+ A L M K P + T+++ G+I+
Sbjct: 279 VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIEN 338
Query: 172 GCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIR 231
+ MV G P++++ N ++G G +A+ ++ D+ +G PD ++Y ++
Sbjct: 339 CRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLN 398
Query: 232 GM---FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEG 288
G E + + RK P ++TY LI+ A+E+ M +G
Sbjct: 399 SYGRSRQPGKAKEVFLMMRKERRK---PNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 455
Query: 289 CYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVD 348
P++++ +L++ ++ V+S SRG+ N YN+ I S + +
Sbjct: 456 IKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAI 515
Query: 349 DVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGL 408
+ + M + VT+ I+++G C+ AIS M S Y+++L
Sbjct: 516 ALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAY 575
Query: 409 CKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDE 468
K+G V E + + C P ++ Y + A EL+ EM GI PD
Sbjct: 576 SKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDS 635
Query: 469 ITHSSLAWGFCGVDQLEEAMELLKEMHKKD 498
I S+L F Q L+ M +K+
Sbjct: 636 IACSALMRAFNKGGQPSNVFVLMDLMREKE 665
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 154/382 (40%), Gaps = 44/382 (11%)
Query: 125 LQNLCTRGRLMAAARLIEIMARKSQ-IPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSG 183
L N R R A+ + +M RK + P+ + LI G + + +I M G
Sbjct: 396 LLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 455
Query: 184 GVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLS-GCSPDAITYNTIIRGMFDKGNFNEA 242
P+V++ ++ C R K VD V + S G + + YN+ I + +A
Sbjct: 456 IKPNVVSVCTLLAA-CSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKA 514
Query: 243 VSFWKDQLRKGCPPYLITYTVLIELVCR---YCGAIRALEVLED---------------- 283
++ ++ +K +T+T+LI CR Y AI L+ +ED
Sbjct: 515 IALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCA 574
Query: 284 ----------------MAMEGCYPDIITYNSLV---SFTAKQGVYEETYLVISNLLSRGM 324
M M GC PD+I Y S++ + + K G E +L + + G+
Sbjct: 575 YSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFL---EMEANGI 631
Query: 325 QPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAIS 384
+P+++ + L+ + + G V ++++M E P T + + + RAI
Sbjct: 632 EPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAID 691
Query: 385 LYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLA 444
L M I N +L K G V+ ++L Y + + L TY I ++ L
Sbjct: 692 LIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLL 751
Query: 445 RMGSMESAKELYSEMIGKGIVP 466
+G+ E+ M G GI P
Sbjct: 752 AVGNWRKYIEVLEWMSGAGIQP 773
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 100/236 (42%), Gaps = 8/236 (3%)
Query: 334 LIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSES 393
++ L + W+ VD VL N R + +++ L + G ++ ++++ M +
Sbjct: 81 VVDRLMALNRWEEVDGVL---NSWVGRFARKNFPVLIRELSRRGCIELCVNVFKWMKIQK 137
Query: 394 CF---PDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSME 450
+ DI YN ++ + +VD+ L + + +C P TY+ I+ R G
Sbjct: 138 NYCARNDI--YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWR 195
Query: 451 SAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVI 510
A L +M+ I P T+++L EA+E+ K+M + V+
Sbjct: 196 WAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVL 255
Query: 511 LGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
R+ A+ +LM ++ +PD ++ +I ++ G +A DL + E
Sbjct: 256 SAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMRE 311
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 8/206 (3%)
Query: 165 KIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAI 224
K GQ+ + I N M M+G PDVI ++ A +L +M +G PD+I
Sbjct: 577 KQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSI 636
Query: 225 TYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAI----RALEV 280
+ ++R F+KG V D +R+ P+ T V E+ C + RA+++
Sbjct: 637 ACSALMRA-FNKGGQPSNVFVLMDLMREKEIPF--TGAVFFEIFSA-CNTLQEWKRAIDL 692
Query: 281 LEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSS 340
++ M I N ++ K G E + +++ G+ N TY L+ L +
Sbjct: 693 IQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLA 752
Query: 341 HGYWDGVDDVLEIMNETSSPPTRVTY 366
G W +VLE M+ P+ Y
Sbjct: 753 VGNWRKYIEVLEWMSGAGIQPSNQMY 778
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 183/433 (42%), Gaps = 2/433 (0%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T + ++ G+ A L++ M R + P + NLI G + ++
Sbjct: 45 DAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVC 104
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
M +G PD++T N+V+ A+ E M + PD T+N II +
Sbjct: 105 KKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKL 164
Query: 237 GNFNEAVSFWKD--QLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDII 294
G ++A+ + + R C P ++T+T ++ L V E M EG P+I+
Sbjct: 165 GQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIV 224
Query: 295 TYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIM 354
+YN+L+ A G+ V+ ++ G+ P+ V+Y L++S +V +M
Sbjct: 225 SYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMM 284
Query: 355 NETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFV 414
+ P VTYN +++ +G L A+ ++ M + P++V+ TLL+ +
Sbjct: 285 RKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKK 344
Query: 415 DEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSL 474
+L + YN AI +E A LY M K + D +T + L
Sbjct: 345 VNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTIL 404
Query: 475 AWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRC 534
G C + + EA+ LKEM + Y V+ KQ +V A + M + C
Sbjct: 405 ISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGC 464
Query: 535 KPDEKIYDALIKA 547
+PD Y +++ A
Sbjct: 465 EPDVIAYTSMLHA 477
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 160/390 (41%), Gaps = 8/390 (2%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQ--IPHFPSCTNLIRGLIKIGQIDK 171
VR D T N I+ L G+ A L M K P + T+++ G+I+
Sbjct: 147 VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIEN 206
Query: 172 GCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIR 231
+ MV G P++++ N ++G G +A+ ++ D+ +G PD ++Y ++
Sbjct: 207 CRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLN 266
Query: 232 GM---FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEG 288
G E + + RK P ++TY LI+ A+E+ M +G
Sbjct: 267 SYGRSRQPGKAKEVFLMMRKERRK---PNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 323
Query: 289 CYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVD 348
P++++ +L++ ++ V+S SRG+ N YN+ I S + +
Sbjct: 324 IKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAI 383
Query: 349 DVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGL 408
+ + M + VT+ I+++G C+ AIS M S Y+++L
Sbjct: 384 ALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAY 443
Query: 409 CKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDE 468
K+G V E + + C P ++ Y + A EL+ EM GI PD
Sbjct: 444 SKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDS 503
Query: 469 ITHSSLAWGFCGVDQLEEAMELLKEMHKKD 498
I S+L F Q L+ M +K+
Sbjct: 504 IACSALMRAFNKGGQPSNVFVLMDLMREKE 533
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 154/382 (40%), Gaps = 44/382 (11%)
Query: 125 LQNLCTRGRLMAAARLIEIMARKSQ-IPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSG 183
L N R R A+ + +M RK + P+ + LI G + + +I M G
Sbjct: 264 LLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 323
Query: 184 GVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLS-GCSPDAITYNTIIRGMFDKGNFNEA 242
P+V++ ++ C R K VD V + S G + + YN+ I + +A
Sbjct: 324 IKPNVVSVCTLLAA-CSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKA 382
Query: 243 VSFWKDQLRKGCPPYLITYTVLIELVCR---YCGAIRALEVLED---------------- 283
++ ++ +K +T+T+LI CR Y AI L+ +ED
Sbjct: 383 IALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCA 442
Query: 284 ----------------MAMEGCYPDIITYNSLV---SFTAKQGVYEETYLVISNLLSRGM 324
M M GC PD+I Y S++ + + K G E +L + + G+
Sbjct: 443 YSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFL---EMEANGI 499
Query: 325 QPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAIS 384
+P+++ + L+ + + G V ++++M E P T + + + RAI
Sbjct: 500 EPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAID 559
Query: 385 LYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLA 444
L M I N +L K G V+ ++L Y + + L TY I ++ L
Sbjct: 560 LIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLL 619
Query: 445 RMGSMESAKELYSEMIGKGIVP 466
+G+ E+ M G GI P
Sbjct: 620 AVGNWRKYIEVLEWMSGAGIQP 641
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 8/206 (3%)
Query: 165 KIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAI 224
K GQ+ + I N M M+G PDVI ++ A +L +M +G PD+I
Sbjct: 445 KQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSI 504
Query: 225 TYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAI----RALEV 280
+ ++R F+KG V D +R+ P+ T V E+ C + RA+++
Sbjct: 505 ACSALMRA-FNKGGQPSNVFVLMDLMREKEIPF--TGAVFFEIFSA-CNTLQEWKRAIDL 560
Query: 281 LEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSS 340
++ M I N ++ K G E + +++ G+ N TY L+ L +
Sbjct: 561 IQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLA 620
Query: 341 HGYWDGVDDVLEIMNETSSPPTRVTY 366
G W +VLE M+ P+ Y
Sbjct: 621 VGNWRKYIEVLEWMSGAGIQPSNQMY 646
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 70/166 (42%)
Query: 401 YNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMI 460
YN ++ + +VD+ L + + +C P TY+ I+ R G A L +M+
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 461 GKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVD 520
I P T+++L EA+E+ K+M + V+ R+
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 521 IAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
A+ +LM ++ +PD ++ +I ++ G +A DL + E
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMRE 179
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 173/394 (43%), Gaps = 8/394 (2%)
Query: 118 GFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIIN 177
G K+++ LC R+ A ++ M + P + +I G K I K + N
Sbjct: 291 GIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFN 350
Query: 178 IMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKG 237
M+ + + + ++ C+ G A DL ++ + S D + YN + G
Sbjct: 351 KMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLG 410
Query: 238 NFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYN 297
EA+ +++ KG P +I YT LI C A +++ +M G PDI+ YN
Sbjct: 411 KVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYN 470
Query: 298 SLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNET 357
L A G+ +E + + + +RG++P VT+N +I L G D + E +
Sbjct: 471 VLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHK 530
Query: 358 SSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKE-GFVDE 416
S R M+ G C +G LD A + + E P V Y TL + LC E ++ +
Sbjct: 531 S----RENDASMVKGFCAAGCLDHAFERFIRL--EFPLPKSV-YFTLFTSLCAEKDYISK 583
Query: 417 GIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAW 476
LL + P Y I R+ ++ A+E + ++ K IVPD T++ +
Sbjct: 584 AQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMIN 643
Query: 477 GFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVI 510
+C +++ ++A L ++M ++D K Y ++
Sbjct: 644 TYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLL 677
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 167/415 (40%), Gaps = 20/415 (4%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N + L T G A +++M + P + + +I GLI G++DK +
Sbjct: 470 NVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEH 529
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
D ++ G C G L A + + L P ++ + +K ++
Sbjct: 530 KSRENDA----SMVKGFCAAGCLDHAFERF--IRLEFPLPKSVYFTLFTSLCAEKDYISK 583
Query: 242 AVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVS 301
A + G P Y LI CR +A E E + + PD+ TY +++
Sbjct: 584 AQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMIN 643
Query: 302 FTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPP 361
+ ++ Y + ++ R ++P+ VTY+ L++S D D+ M P
Sbjct: 644 TYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIP 696
Query: 362 TRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLL 421
V Y IM+N C L + +L+ M PD+VTY LL + E
Sbjct: 697 DVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSRE----- 751
Query: 422 YLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGV 481
+ + P + Y + ID ++G + AK ++ +MI G+ PD +++L C +
Sbjct: 752 --MKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKM 809
Query: 482 DQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKP 536
L+EA + M + K Y +I G C+ V A++ + M+ KP
Sbjct: 810 GYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKP 864
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 102/454 (22%), Positives = 184/454 (40%), Gaps = 50/454 (11%)
Query: 157 TNLIRGLIKIGQIDKGCKIINIMVMS-GGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMS 215
T L++ + D+ I S G PD+ N +I + G V ++
Sbjct: 150 TALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIE 209
Query: 216 LSGCSPDAITYNTIIRGMF---DKGNFNEAVS-FWKDQLRKGCPPYL------------- 258
G DA TY +++ ++ DK + +S + R C YL
Sbjct: 210 RLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTD 269
Query: 259 ITYTVL------------IELVCRYCGAIRAL----------EVLEDMAMEGCYPDIITY 296
I Y +L +L Y +R L V+ DM G PD+ Y
Sbjct: 270 IAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVY 329
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
++++ K + V + +L + + N V ++++ G + D+ + E
Sbjct: 330 SAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRE 389
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDE 416
T+ RV YN+ + L K G ++ AI L+ M + PD++ Y TL+ G C +G +
Sbjct: 390 TNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSD 449
Query: 417 GIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAW 476
L+ + GT +P +V YN+ GLA G + A E M +G+ P +TH+ +
Sbjct: 450 AFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIE 509
Query: 477 GFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKP 536
G +L++A + + K + + ++ G C +D A + +R
Sbjct: 510 GLIDAGELDKAEAFYESLEHKSRENDAS----MVKGFCAAGCLD---HAFERFIRLEFPL 562
Query: 537 DEKIYDALIKAV-ADSGMVKEANDLHQRLIEWKI 569
+ +Y L ++ A+ + +A DL R+ WK+
Sbjct: 563 PKSVYFTLFTSLCAEKDYISKAQDLLDRM--WKL 594
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 157/386 (40%), Gaps = 41/386 (10%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T+N +++ L G L A E + KS+ + ++++G G +D + +
Sbjct: 503 THNMVIEGLIDAGELDKAEAFYESLEHKSR----ENDASMVKGFCAAGCLDHAFE--RFI 556
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
+ +P + + ++ Y+ A DL++ M G P+ Y +I N
Sbjct: 557 RLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNV 616
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
+A F++ + K P L TYT++I CR +A + EDM PD++TY+ L
Sbjct: 617 RKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVL 676
Query: 300 ----------------------VSFTAKQGVY------EETYLVISNLLSRGMQPNAVTY 331
V +T Y ++ Y + ++ R + P+ VTY
Sbjct: 677 LNSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTY 736
Query: 332 NTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVS 391
L+ + ++ M P Y ++++ CK G L A ++ M+
Sbjct: 737 TVLLKNKPER-------NLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIE 789
Query: 392 ESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMES 451
PD Y L++ CK G++ E + + + P +V Y I G R G +
Sbjct: 790 SGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLK 849
Query: 452 AKELYSEMIGKGIVPDEITHSSLAWG 477
A +L EM+ KGI P + + S++ +
Sbjct: 850 AVKLVKEMLEKGIKPTKASLSAVHYA 875
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 50/108 (46%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
V+ D F ++ C G L A R+ + M P T LI K+G + +
Sbjct: 757 VKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAK 816
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSP 221
I + M+ SG PDV+ +I G C+ G++ AV LV++M G P
Sbjct: 817 MIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKP 864
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 112/500 (22%), Positives = 212/500 (42%), Gaps = 51/500 (10%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N+++ LCT R++ A +L+ M + +P + T LI G +I +++ K+ + M +
Sbjct: 166 NRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRV 225
Query: 182 SGGVPDVITCNMVIGG----------------------------------------LCKR 201
G P+ +T +++IGG +C+
Sbjct: 226 CGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCRE 285
Query: 202 GYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITY 261
GY ++ E+MSL Y +I + + A KG P +Y
Sbjct: 286 GYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSY 345
Query: 262 TVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLS 321
+I +C+ G +RA ++LE+ + +P TY L+ K+ + V+ +L
Sbjct: 346 NAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLR 405
Query: 322 RGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDR 381
+ YN + L + +VL M + P T N ++NGLCK G +D
Sbjct: 406 KEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDD 465
Query: 382 AISLYSTMVS-ESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTN-CSPGLVTYNIA 439
A+ + M++ + C PD VT NT++ GL +G +E + +L + N PG+V YN
Sbjct: 466 AMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAV 525
Query: 440 IDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDE 499
I GL ++ + A ++ ++ + D T++ + G C ++++ A + ++
Sbjct: 526 IRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSG 585
Query: 500 KIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEAND 559
+ Y + GLC+ + A L + S P+ Y+ +I + SG+ +EA
Sbjct: 586 RHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQ 645
Query: 560 LHQRL---------IEWKIL 570
+ + + + W+IL
Sbjct: 646 ILEEMRKNGQAPDAVTWRIL 665
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 168/385 (43%), Gaps = 19/385 (4%)
Query: 116 NDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKI 175
N F ++ +LC R AAR++ IM K P S +I GL K D GC
Sbjct: 305 NVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCK----DGGCMR 360
Query: 176 INIMVMSGG----VPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIR 231
++ G P T +++ LCK A +++E M + YN +R
Sbjct: 361 AYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLR 420
Query: 232 GMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEG--C 289
G+ N E ++ L+ C P T +I +C+ A++VL+DM M G C
Sbjct: 421 GLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDM-MTGKFC 479
Query: 290 YPDIITYNSLVSFTAKQGVYEETYLVISNLLSRG-MQPNAVTYNTLIHSLSSHGYWDGVD 348
PD +T N+++ QG EE V++ ++ ++P V YN +I L D
Sbjct: 480 APDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAM 539
Query: 349 DVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGL 408
V + + S TY I+++GLC + +D A + ++ S D Y L GL
Sbjct: 540 SVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGL 599
Query: 409 CKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDE 468
C+ G++ + LY L + P +V YN I +R G A ++ EM G PD
Sbjct: 600 CQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDA 659
Query: 469 ITHSSLAWGFCGVDQLEEAMELLKE 493
+T W +D+L ++M+L E
Sbjct: 660 VT-----WRI--LDKLHDSMDLTVE 677
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 133/597 (22%), Positives = 235/597 (39%), Gaps = 141/597 (23%)
Query: 81 NEVDHEDWGLESFERRESGELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARL 140
++V+ ED +E+ +RR S V + + +I R A R+
Sbjct: 33 DDVEGEDDAIEAEDRRRS---------------VTDRAYWRRRIHSICAVRRNPDEALRI 77
Query: 141 IEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLC- 199
++ + + P + +++I L G+ D+ + + + SG +PD TCN++I L
Sbjct: 78 LDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLY 137
Query: 200 -----------------KRGYLKS-------------------AVDLVEDMSLSGCSPDA 223
K+ ++ S A LV DM G PD
Sbjct: 138 SRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDV 197
Query: 224 ITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLI------------------ 265
+T+ T+I G + A + + G P +T +VLI
Sbjct: 198 VTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKE 257
Query: 266 ----------------------ELVCRYCGAIRALEVLEDMAM------EGCYPDIITYN 297
+ +CR E+ E+M++ E Y +I +
Sbjct: 258 LWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMI--D 315
Query: 298 SLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNET 357
SL + G Y+ + S+G++P +YN +IH L G +LE +E
Sbjct: 316 SLCRYRRNHGAARIVYI----MKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEF 371
Query: 358 SSPPTRVTYNIMLNGLCKS------------------------------GL--LDRAISL 385
P+ TY +++ LCK GL +D +
Sbjct: 372 EFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEI 431
Query: 386 YSTMVSE---SCFPDIVTYNTLLSGLCKEGFVDEGIQLL-YLLTGTNCSPGLVTYNIAID 441
+ +VS C PD T NT+++GLCK G VD+ +++L ++TG C+P VT N +
Sbjct: 432 LNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMC 491
Query: 442 GLARMGSMESAKELYSEMIGKG-IVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEK 500
GL G E A ++ + ++ + I P + ++++ G + + +EAM + ++ K
Sbjct: 492 GLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVT 551
Query: 501 IKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
T Y +I GLC KVD+A + D ++ + D +Y A +K + SG + +A
Sbjct: 552 ADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDA 608
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/476 (25%), Positives = 198/476 (41%), Gaps = 40/476 (8%)
Query: 128 LCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPD 187
LC++ +AA IE M P S ++I+ L + I+ ++NI+ VPD
Sbjct: 487 LCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPD 546
Query: 188 VITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWK 247
V T +V+ LCK+ +A +++ M G P Y++II + +G EA +
Sbjct: 547 VDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFA 606
Query: 248 DQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQG 307
L G P I Y ++I R A E++E++ P TY L+S K G
Sbjct: 607 KMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMG 666
Query: 308 VYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYN 367
+ E+ + +L G+ PN V Y LI G + + +M E + Y
Sbjct: 667 MMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYI 726
Query: 368 IMLNGLC----------------KSGLLDRAI------SLYSTM---------------V 390
+L+GL K LL R I S+ S++ V
Sbjct: 727 TLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKV 786
Query: 391 SESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSME 450
+S P++ +NT+++G C G +DE L + P LVTY I + G +E
Sbjct: 787 KKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIE 846
Query: 451 SAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVI 510
SA +L+ G PD++ +S+L G C + +A+ L+ EM K +Y ++
Sbjct: 847 SAIDLFE---GTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLL 903
Query: 511 LGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
LC R A++ + M P + LI + + ++EA L +++
Sbjct: 904 QCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQ 959
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 106/451 (23%), Positives = 188/451 (41%), Gaps = 40/451 (8%)
Query: 119 FTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINI 178
F+ N +++ L + A L+ I+ +P + ++ L K D II+
Sbjct: 513 FSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDA 572
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN 238
M G P V + +IG L K+G + A + M SG PD I Y +I G
Sbjct: 573 MEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGR 632
Query: 239 FNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNS 298
+EA ++ ++ P TYTVLI + + + L+ M +G P+++ Y +
Sbjct: 633 IDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTA 692
Query: 299 LVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSL-------------------- 338
L+ K+G ++ ++ + + ++ + + Y TL+ L
Sbjct: 693 LIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEK 752
Query: 339 ---------------SSHGYWDGVDDVLEIMNET--SSPPTRVTYNIMLNGLCKSGLLDR 381
SS G + +E++ + S P +N ++ G C +G LD
Sbjct: 753 LLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDE 812
Query: 382 AISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAID 441
A + +M E P++VTY L+ + G ++ I L GTNC P V Y+ +
Sbjct: 813 AYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLF---EGTNCEPDQVMYSTLLK 869
Query: 442 GLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKI 501
GL A L EM GI P++ ++ L C EA++++K+M D
Sbjct: 870 GLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWP 929
Query: 502 KHTAYRCVILGLCKQRKVDIAIQALDLMVRS 532
+ + +I LC+++K+ A +MV+S
Sbjct: 930 RSINHTWLIYILCEEKKLREARALFAIMVQS 960
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 179/404 (44%), Gaps = 13/404 (3%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSC-TNLIRGLIKIGQIDKG 172
V+++ FT + ++ + C G + A RL I C TNLI G K G +DK
Sbjct: 338 VQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKA 397
Query: 173 CKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGC--SPDAITYNTII 230
++ M+ +G VPD IT +++ L K LK A+ +++ + +GC +P I
Sbjct: 398 VDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVID----- 452
Query: 231 RGMFDKGNFNEAV-SFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGC 289
D GN V S + RK + V+ +C I AL +E M GC
Sbjct: 453 ----DLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGC 508
Query: 290 YPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDD 349
P +YNS++ ++ + E+ +++ + P+ TY +++ L D
Sbjct: 509 TPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFA 568
Query: 350 VLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLC 409
+++ M E PT Y+ ++ L K G + A ++ M+ PD + Y +++
Sbjct: 569 IIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYA 628
Query: 410 KEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEI 469
+ G +DE +L+ + P TY + I G +MG ME + +M+ G+ P+ +
Sbjct: 629 RNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVV 688
Query: 470 THSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGL 513
+++L F + + L M + D K H AY ++ GL
Sbjct: 689 LYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGL 732
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 98/445 (22%), Positives = 171/445 (38%), Gaps = 72/445 (16%)
Query: 150 IPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVD 209
+P +++ L+K+ + D+ ++ ++ SG P + ++V+ LC + A
Sbjct: 128 VPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFH 187
Query: 210 LVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQL----RKGCPPYLITYTVLI 265
E + G + +G+ G+ NEA+ D L R P L Y L
Sbjct: 188 CFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGML-DTLCGMTRMPLPVNL--YKSLF 244
Query: 266 ELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQ 325
C+ A A + + M ++G Y D + Y L+ K + ++ R +
Sbjct: 245 YCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFE 304
Query: 326 PNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISL 385
+ +NTLIH G K G+LD+ +
Sbjct: 305 LDPCIFNTLIH-----------------------------------GFMKLGMLDKGRVM 329
Query: 386 YSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGT-NCSPGLVTYNIAIDGLA 444
+S M+ + ++ TY+ ++ CKEG VD ++L TG+ + S + Y I G
Sbjct: 330 FSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFY 389
Query: 445 RMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAM---------------- 488
+ G M+ A +L M+ GIVPD IT+ L +L+ AM
Sbjct: 390 KKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPP 449
Query: 489 -------------ELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCK 535
LL E+ +KD + V LC QR A+ ++ MV C
Sbjct: 450 VIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCT 509
Query: 536 PDEKIYDALIKAVADSGMVKEANDL 560
P Y+++IK + ++++ L
Sbjct: 510 PLPFSYNSVIKCLFQENIIEDLASL 534
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 105/481 (21%), Positives = 186/481 (38%), Gaps = 84/481 (17%)
Query: 117 DGFTNNKIL-----QNLCTRGRLMAAARLIEIMARKSQIPHFPSCTN-LIRGLIKIGQID 170
DG+ +K++ + C + A RL M +S P N LI G +K+G +D
Sbjct: 266 DGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERS-FELDPCIFNTLIHGFMKLGMLD 324
Query: 171 KGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDL-VEDMSLSGCSPDAITYNTI 229
KG + + M+ G +V T +++IG CK G + A+ L V + S + Y +
Sbjct: 325 KGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNL 384
Query: 230 IRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGC 289
I G + KG ++AV ++L M G
Sbjct: 385 IFGFYKKGGMDKAV-----------------------------------DLLMRMLDNGI 409
Query: 290 YPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDD 349
PD ITY L+ K + +++ ++L G N + L V+
Sbjct: 410 VPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDL------GNIEVKVES 463
Query: 350 VLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLC 409
+L + + V ++ LC A+S MV+ C P +YN+++ L
Sbjct: 464 LLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLF 523
Query: 410 KEGFVDEGIQLLYLLTGTNCSPGLVTYNIAID---------------------------- 441
+E +++ L+ ++ + P + TY I ++
Sbjct: 524 QENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVA 583
Query: 442 -------GLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEM 494
L + G + A+E +++M+ GI PDEI + + + +++EA EL++E+
Sbjct: 584 IYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEV 643
Query: 495 HKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMV 554
K + Y +I G K ++ Q LD M+ P+ +Y ALI G
Sbjct: 644 VKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDF 703
Query: 555 K 555
K
Sbjct: 704 K 704
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/418 (22%), Positives = 170/418 (40%), Gaps = 37/418 (8%)
Query: 191 CNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAIT-YNTIIRGMFDKGNFNEAVSFWKDQ 249
C + GLC G+L A+ +++ + P + Y ++ +G EA + +
Sbjct: 204 CKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHM 263
Query: 250 LRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVY 309
G + YT L++ C+ A+ + M D +N+L+ K G+
Sbjct: 264 EVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGML 323
Query: 310 EETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI-MNETSSPPTRVT--- 365
++ ++ S ++ +G+Q N TY+ +I S G VD L + +N T S
Sbjct: 324 DKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEG---NVDYALRLFVNNTGSEDISRNVHC 380
Query: 366 YNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLT 425
Y ++ G K G +D+A+ L M+ PD +TY LL L K + + +L +
Sbjct: 381 YTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSIL 440
Query: 426 GTNC--SPGLVT--------------------YNIAIDGLARMGSMESAKELY------- 456
C +P ++ N+A GLA + + ++ Y
Sbjct: 441 DNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRI 500
Query: 457 SEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQ 516
+M+ G P +++S+ + +E+ L+ + + D Y V+ LCK+
Sbjct: 501 EKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKK 560
Query: 517 RKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKILKTEI 574
D A +D M +P IY ++I ++ G V EA + +++E I EI
Sbjct: 561 NDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEI 618
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/365 (20%), Positives = 148/365 (40%), Gaps = 4/365 (1%)
Query: 206 SAVDLVEDMSL-SGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQ-LRKGCPPYLITYTV 263
S LV D ++ +G D+ Y +IR + + G A +F+ + + G P
Sbjct: 77 SEAALVADFAVDNGIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDS 136
Query: 264 LIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRG 323
++ + + A L+ + G P + + +V Q + E + + RG
Sbjct: 137 MVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERG 196
Query: 324 MQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVT-YNIMLNGLCKSGLLDRA 382
L L HG+ + +L+ + + P V Y + CK G A
Sbjct: 197 SGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEA 256
Query: 383 ISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDG 442
+L+ M + + D V Y L+ CK+ + ++L + + +N I G
Sbjct: 257 EALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHG 316
Query: 443 LARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIK 502
++G ++ + ++S+MI KG+ + T+ + +C ++ A+ L ++ +
Sbjct: 317 FMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISR 376
Query: 503 HT-AYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLH 561
+ Y +I G K+ +D A+ L M+ + PD Y L+K + +K A +
Sbjct: 377 NVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVIL 436
Query: 562 QRLIE 566
Q +++
Sbjct: 437 QSILD 441
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 87/205 (42%), Gaps = 38/205 (18%)
Query: 119 FTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINI 178
+ +N I+ C GRL A +E M ++ +P+ + T L++ I+ G I+
Sbjct: 795 YLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIE-------- 846
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN 238
SA+DL E + C PD + Y+T+++G+ D
Sbjct: 847 ---------------------------SAIDLFEG---TNCEPDQVMYSTLLKGLCDFKR 876
Query: 239 FNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNS 298
+A++ + + G P +Y L++ +C + A++V++DMA +P I +
Sbjct: 877 PLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTW 936
Query: 299 LVSFTAKQGVYEETYLVISNLLSRG 323
L+ ++ E + + ++ G
Sbjct: 937 LIYILCEEKKLREARALFAIMVQSG 961
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 176/416 (42%), Gaps = 41/416 (9%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
+ K++ L RGR A + + +A P S T L+ + Q I++ +
Sbjct: 47 SRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEV 106
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
SG D I N VI + G ++ AV + M G +P TYNT+I+G G
Sbjct: 107 EQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKP 166
Query: 240 NEAVSFWKDQLRKG---CPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
+ L +G P + T+ VL++ C+ A EV++ M G PD +TY
Sbjct: 167 ERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTY 226
Query: 297 NSLVSFTAKQG--VYEETYLVISNLLSRGMQPNA-------------------------- 328
N++ + ++G V E+ +V ++ +PN
Sbjct: 227 NTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRM 286
Query: 329 ---------VTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLL 379
V +N+LI+ DG+D+VL +M E + +TY+ ++N +G +
Sbjct: 287 KEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYM 346
Query: 380 DRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIA 439
++A ++ MV PD Y+ L G + + +LL L P +V +
Sbjct: 347 EKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI-VESRPNVVIFTTV 405
Query: 440 IDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMH 495
I G GSM+ A ++++M G+ P+ T +L WG+ V Q +A E+L+ M
Sbjct: 406 ISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMR 461
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 184/397 (46%), Gaps = 8/397 (2%)
Query: 155 SCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDM 214
S T L+ LI+ G+ + + + +G P +I+ ++ + + S +V ++
Sbjct: 47 SRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEV 106
Query: 215 SLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGA 274
SG D+I +N +I + GN +AV G P TY LI+
Sbjct: 107 EQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKP 166
Query: 275 IRALEVLEDMAMEG---CYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTY 331
R+ E+L+ M EG P+I T+N LV K+ EE + V+ + G++P+ VTY
Sbjct: 167 ERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTY 226
Query: 332 NTLIHSLSSHGYWDGVD-DVLE--IMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYST 388
NT+ G + +V+E +M E + P R T I++ G C+ G + +
Sbjct: 227 NTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGR-TCGIVVGGYCREGRVRDGLRFVRR 285
Query: 389 MVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGS 448
M ++V +N+L++G + D ++L L+ N ++TY+ ++ + G
Sbjct: 286 MKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGY 345
Query: 449 MESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRC 508
ME A +++ EM+ G+ PD +S LA G+ + ++A ELL E + + +
Sbjct: 346 MEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELL-ETLIVESRPNVVIFTT 404
Query: 509 VILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALI 545
VI G C +D A++ + M + P+ K ++ L+
Sbjct: 405 VISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLM 441
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 151/343 (44%), Gaps = 15/343 (4%)
Query: 233 MFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIE--LVCRYCGAIRALEVLEDMAMEGCY 290
+ ++G +EA + +K G P LI+YT L+ V + G+I + ++ ++ G
Sbjct: 55 LIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISS--IVSEVEQSGTK 112
Query: 291 PDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDV 350
D I +N++++ ++ G E+ + + G+ P TYNTLI G + ++
Sbjct: 113 LDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSEL 172
Query: 351 LEIMNETSS---PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSG 407
L++M E + P T+N+++ CK ++ A + M PD VTYNT+ +
Sbjct: 173 LDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATC 232
Query: 408 LCKEGFV--DEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIV 465
++G E + ++ P T I + G R G + M +
Sbjct: 233 YVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVE 292
Query: 466 PDEITHSSLAWGFCGV---DQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIA 522
+ + +SL GF V D ++E + L+KE + K + I Y V+ ++ A
Sbjct: 293 ANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVI---TYSTVMNAWSSAGYMEKA 349
Query: 523 IQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLI 565
Q MV++ KPD Y L K + K+A +L + LI
Sbjct: 350 AQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI 392
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 108/269 (40%), Gaps = 38/269 (14%)
Query: 115 RNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCK 174
+ +G T ++ C GR+ R + M + +LI G +++ D +
Sbjct: 257 KPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDE 316
Query: 175 IINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMF 234
++ +M DVIT + V+ GY++ A + ++M +G PDA Y+ + +G
Sbjct: 317 VLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGY- 375
Query: 235 DKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDII 294
+R P +A E+LE + +E P+++
Sbjct: 376 ---------------VRAKEPK-------------------KAEELLETLIVES-RPNVV 400
Query: 295 TYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHS-LSSHGYWDGVDDVLEI 353
+ +++S G ++ V + + G+ PN T+ TL+ L W ++VL++
Sbjct: 401 IFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKA-EEVLQM 459
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRA 382
M P T+ ++ +GL D +
Sbjct: 460 MRGCGVKPENSTFLLLAEAWRVAGLTDES 488
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 96/214 (44%), Gaps = 4/214 (1%)
Query: 356 ETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVD 415
E SS T + ++N L + G A +++ T+ P +++Y TLL+ + +
Sbjct: 38 EGSSCRTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYG 97
Query: 416 EGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLA 475
++ + + + +N I+ + G+ME A + +M G+ P T+++L
Sbjct: 98 SISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLI 157
Query: 476 WGFCGVDQLEEAMELLKEMHKK---DEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRS 532
G+ + E + ELL M ++ D + ++ CK++KV+ A + + M
Sbjct: 158 KGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEEC 217
Query: 533 RCKPDEKIYDALIKAVADSG-MVKEANDLHQRLI 565
+PD Y+ + G V+ +++ ++++
Sbjct: 218 GVRPDTVTYNTIATCYVQKGETVRAESEVVEKMV 251
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 172/390 (44%), Gaps = 35/390 (8%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D F N +L L + A ++ E M ++ + T +IR + +IG+ D+ +
Sbjct: 237 DIFAYNMLLDALAKDEK---ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLF 293
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
N M+ G +V+ N ++ L K + A+ + M +GC P+ TY+ ++ + +
Sbjct: 294 NEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAE 353
Query: 237 GNF---NEAVSFWKDQLRKGCPPYLI-----------------------------TYTVL 264
G + V K + +G YL+ +Y +
Sbjct: 354 GQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSM 413
Query: 265 IELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGM 324
+E +C I A+E+L + +G D + YN++ S K + + + G
Sbjct: 414 LESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGP 473
Query: 325 QPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAIS 384
P+ TYN LI S G D ++ E + + P ++YN ++N L K+G +D A
Sbjct: 474 SPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHV 533
Query: 385 LYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLA 444
+ M + PD+VTY+TL+ K V+ L + C P +VTYNI +D L
Sbjct: 534 RFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLE 593
Query: 445 RMGSMESAKELYSEMIGKGIVPDEITHSSL 474
+ G A +LYS+M +G+ PD IT++ L
Sbjct: 594 KNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 168/378 (44%), Gaps = 6/378 (1%)
Query: 187 DVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFW 246
D+ NM++ L K + A + EDM C D TY +IR M G +EAV +
Sbjct: 237 DIFAYNMLLDALAKD---EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLF 293
Query: 247 KDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQ 306
+ + +G ++ Y L++++ + +A++V M GC P+ TY+ L++ +
Sbjct: 294 NEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAE 353
Query: 307 GVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTY 366
G V+ +S+ + Y+ L+ +LS G+ + M R +Y
Sbjct: 354 GQLVRLDGVVE--ISKRYMTQGI-YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSY 410
Query: 367 NIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTG 426
ML LC +G AI + S + + D + YNT+ S L K + L +
Sbjct: 411 MSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKK 470
Query: 427 TNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEE 486
SP + TYNI I R+G ++ A ++ E+ PD I+++SL ++E
Sbjct: 471 DGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDE 530
Query: 487 AMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIK 546
A KEM +K Y ++ K +V++A + M+ C+P+ Y+ L+
Sbjct: 531 AHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLD 590
Query: 547 AVADSGMVKEANDLHQRL 564
+ +G EA DL+ ++
Sbjct: 591 CLEKNGRTAEAVDLYSKM 608
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/471 (22%), Positives = 198/471 (42%), Gaps = 40/471 (8%)
Query: 112 PFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDK 171
P+ +ND F N R+I I++R + F +++ ++K +
Sbjct: 127 PYSQNDPFLYN----------------RIILILSRSNLPDRFDRVRSILDSMVK-SNVHG 169
Query: 172 GCKIINIMV-MSGGVPDVITC-----------NMVIGGLCKRGYLKS-----AVDLVEDM 214
+NI++ G D+ C N + YL+S A D+ ++
Sbjct: 170 NISTVNILIGFFGNTEDLQMCLRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEI 229
Query: 215 SLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGA 274
G D YN ++ + +A ++D ++ C TYT++I + R
Sbjct: 230 RRGGHKLDIFAYNMLLDAL---AKDEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKC 286
Query: 275 IRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTL 334
A+ + +M EG +++ YN+L+ AK + ++ V S ++ G +PN TY+ L
Sbjct: 287 DEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLL 346
Query: 335 IHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESC 394
++ L + G +D V+EI + T+ Y+ ++ L K G + A L+ M S
Sbjct: 347 LNLLVAEGQLVRLDGVVEI---SKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPV 403
Query: 395 FPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKE 454
+ +Y ++L LC G E I++L + + YN L ++ + +
Sbjct: 404 KGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHD 463
Query: 455 LYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLC 514
L+ +M G PD T++ L F V +++EA+ + +E+ + D K +Y +I L
Sbjct: 464 LFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLG 523
Query: 515 KQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLI 565
K VD A M PD Y L++ + V+ A L + ++
Sbjct: 524 KNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEML 574
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 4/168 (2%)
Query: 100 ELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNL 159
+L + K P P D FT N ++ + G + A + E + R P S +L
Sbjct: 463 DLFEKMKKDGPSP----DIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSL 518
Query: 160 IRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGC 219
I L K G +D+ M G PDV+T + ++ K ++ A L E+M + GC
Sbjct: 519 INCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGC 578
Query: 220 SPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIEL 267
P+ +TYN ++ + G EAV + ++G P ITYTVL L
Sbjct: 579 QPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLERL 626
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 165/363 (45%), Gaps = 20/363 (5%)
Query: 205 KSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITY--- 261
+ A+ L G D +Y+++I + NF+ DQ+ + L+ Y
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAV-----DQILR-----LVRYRNV 112
Query: 262 ----TVLIELVCRY--CGAI-RALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYL 314
++ + L+ Y G++ +A++V + C I + N+L++ G E+
Sbjct: 113 RCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKS 172
Query: 315 VISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLC 374
++PN+V++N LI W+ V + M E P+ VTYN ++ LC
Sbjct: 173 FFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLC 232
Query: 375 KSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLV 434
++ + +A SL M+ + P+ VT+ L+ GLC +G +E +L++ + C PGLV
Sbjct: 233 RNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLV 292
Query: 435 TYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEM 494
Y I + L + G ++ AK L EM + I PD + ++ L C ++ EA +L EM
Sbjct: 293 NYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEM 352
Query: 495 HKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMV 554
K K YR +I G C+ D + L+ M+ SR P + ++ + G +
Sbjct: 353 QMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNL 412
Query: 555 KEA 557
A
Sbjct: 413 DHA 415
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 160/362 (44%)
Query: 153 FPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVE 212
+PS ++LI L K D +I+ ++ +I K G + A+D+
Sbjct: 81 YPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFH 140
Query: 213 DMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYC 272
++ C + NT+I + D G +A SF+ P +++ +LI+ C
Sbjct: 141 KITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKC 200
Query: 273 GAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYN 332
A +V ++M P ++TYNSL+ F + + ++ +++ + ++PNAVT+
Sbjct: 201 DWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFG 260
Query: 333 TLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSE 392
L+ L G ++ ++ M P V Y I+++ L K G +D A L M
Sbjct: 261 LLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKR 320
Query: 393 SCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESA 452
PD+V YN L++ LC E V E ++L + C P TY + IDG R+ +S
Sbjct: 321 RIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSG 380
Query: 453 KELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILG 512
+ + M+ P T + G L+ A +L+ M KK+ A++ ++
Sbjct: 381 LNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSD 440
Query: 513 LC 514
LC
Sbjct: 441 LC 442
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 117/288 (40%), Gaps = 35/288 (12%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N ++ L G L A + P+ S LI+G + + CK+ + M+
Sbjct: 155 NTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLE 214
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
P V+T N +IG LC+ + A L+EDM P+A+T+ +++G+ KG +NE
Sbjct: 215 MEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNE 274
Query: 242 AVSFWKDQLRKGCPPYLITY-----------------------------------TVLIE 266
A D +GC P L+ Y +L+
Sbjct: 275 AKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVN 334
Query: 267 LVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQP 326
+C C A VL +M M+GC P+ TY ++ + ++ V++ +L+ P
Sbjct: 335 HLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCP 394
Query: 327 NAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLC 374
T+ ++ L G D VLE+M + + + +L+ LC
Sbjct: 395 TPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLC 442
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 98/251 (39%), Gaps = 35/251 (13%)
Query: 310 EETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIM 369
EE + G + + +Y++LI+ L+ +D VD +L + V Y
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRL----------VRYR-- 110
Query: 370 LNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNC 429
N C+ L I Y K G VD+ I + + +T +C
Sbjct: 111 -NVRCRESLFMGLIQHYG----------------------KAGSVDKAIDVFHKITSFDC 147
Query: 430 SPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAME 489
+ + N I+ L G +E AK + + P+ ++ + L GF E A +
Sbjct: 148 VRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACK 207
Query: 490 LLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVA 549
+ EM + + + Y +I LC+ + A L+ M++ R +P+ + L+K +
Sbjct: 208 VFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLC 267
Query: 550 DSGMVKEANDL 560
G EA L
Sbjct: 268 CKGEYNEAKKL 278
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/450 (23%), Positives = 208/450 (46%), Gaps = 22/450 (4%)
Query: 118 GFTNNKILQNLCTRGRLMAAAR-LIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
G + + ++ + RL+ AR LIE S + + P ++L+ L+ +I
Sbjct: 112 GIKSYALTIHILVKARLLIDARALIE-----SSLLNSPPDSDLVDSLLDTYEI------- 159
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
S P V ++++ K YL+ D+ + + G + IT NT+I K
Sbjct: 160 -----SSSTPLVF--DLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYS-SK 211
Query: 237 GNFNEAV-SFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIIT 295
++ V ++ + K P IT ++I+++C+ +++L+ + + C P +I
Sbjct: 212 SKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIV 271
Query: 296 YNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMN 355
SLV ++ EE+ ++ LL + M + + Y+ ++++ + G V + M
Sbjct: 272 NTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEML 331
Query: 356 ETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVD 415
+ Y + + C+ G + A L S M P T+N L+ G + G+ +
Sbjct: 332 QRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEE 391
Query: 416 EGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLA 475
+G++ ++ P +N + ++++ ++ A E+ ++ I KG VPDE T+S L
Sbjct: 392 KGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLI 451
Query: 476 WGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCK 535
GF + +++A++L EM + +R +I+GLC KV+ + L +M + +
Sbjct: 452 RGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIE 511
Query: 536 PDEKIYDALIKAVADSGMVKEANDLHQRLI 565
P+ IYDALIKA G A+ ++ +I
Sbjct: 512 PNADIYDALIKAFQKIGDKTNADRVYNEMI 541
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 147/348 (42%), Gaps = 25/348 (7%)
Query: 240 NEAVSF--WKDQ---LRKGCPPYLITYTVLIELVCRYCGAIRAL---------------- 278
+A+SF W LR G Y +T +L++ R RAL
Sbjct: 94 KQALSFFHWSSHTRNLRHGIKSYALTIHILVK--ARLLIDARALIESSLLNSPPDSDLVD 151
Query: 279 EVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSL 338
+L+ + P + ++ LV AK E + V L G + +T NTLIH
Sbjct: 152 SLLDTYEISSSTP--LVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYS 209
Query: 339 SSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDI 398
S D V + E + P +T IM+ LCK G L + L + + C P +
Sbjct: 210 SKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSV 269
Query: 399 VTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSE 458
+ +L+ + +E ++E + LL L N + Y+I + A+ G + SA++++ E
Sbjct: 270 IVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDE 329
Query: 459 MIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRK 518
M+ +G + ++ C ++EA LL EM + + C+I G +
Sbjct: 330 MLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGW 389
Query: 519 VDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
+ ++ ++MV P ++ ++K+V+ V AN++ + I+
Sbjct: 390 EEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSID 437
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 126/303 (41%), Gaps = 35/303 (11%)
Query: 124 ILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSG 183
++Q LC GRL L++ + K +P T+L+ +++ +I++ ++ ++M
Sbjct: 240 MIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKN 299
Query: 184 GVPDVITCNMVI------GGL-----------------------------CKRGYLKSAV 208
V D I ++V+ G L C++G +K A
Sbjct: 300 MVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAE 359
Query: 209 DLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELV 268
L+ +M SG SP T+N +I G G + + + + + +G P + +++ V
Sbjct: 360 RLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSV 419
Query: 269 CRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNA 328
+ RA E+L +G PD TY+ L+ + ++ + + R M P
Sbjct: 420 SKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGF 479
Query: 329 VTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYST 388
+ +LI L + G + + L+IM + P Y+ ++ K G A +Y+
Sbjct: 480 EVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNE 539
Query: 389 MVS 391
M+S
Sbjct: 540 MIS 542
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 103/232 (44%), Gaps = 12/232 (5%)
Query: 83 VDHEDWGLESFERRESGELVDPGKPVKPPPFVRNDGFTNNKILQNL-----CTRGRLMAA 137
VD + + + + + G+LV K + GF+ N + + C +G + A
Sbjct: 302 VDTIGYSIVVYAKAKEGDLVSARKVFDE---MLQRGFSANSFVYTVFVRVCCEKGDVKEA 358
Query: 138 ARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGG 197
RL+ M P+ + LI G + G +KG + +MV G +P N ++
Sbjct: 359 ERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKS 418
Query: 198 LCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVS-FWKDQLRKGCPP 256
+ K + A +++ G PD TY+ +IRG + + ++A+ F++ + RK P
Sbjct: 419 VSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPG 478
Query: 257 YLITYTVLIELVCRYCGAIRALE-VLEDMAMEGCYPDIITYNSLVSFTAKQG 307
+ + ++++ L CG + A E L+ M P+ Y++L+ K G
Sbjct: 479 FEVFRSLIVGLCT--CGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIG 528
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 151/325 (46%), Gaps = 4/325 (1%)
Query: 115 RNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPH-FPSCTNLIRGLIKIGQIDKGC 173
R D + N++L+ + + + R+ H + T ++ L + Q +
Sbjct: 323 RMDAYQANQVLKQMDNYANALG---FFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEIN 379
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
K+++ MV G P+ +T N +I + YLK A+++ M +GC PD +TY T+I
Sbjct: 380 KLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIH 439
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
G + A+ ++ G P TY+V+I + + A + +M +GC P++
Sbjct: 440 AKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNL 499
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
+T+N +++ AK YE + ++ + G QP+ VTY+ ++ L G+ + + V
Sbjct: 500 VTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAE 559
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
M + P Y ++++ K+G +D+A Y M+ P++ T N+LLS +
Sbjct: 560 MQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHR 619
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNI 438
+ E LL + P L TY +
Sbjct: 620 MSEAYNLLQSMLALGLHPSLQTYTL 644
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 124/277 (44%)
Query: 218 GCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRA 277
G D TY T++ + F E + +R GC P +TY LI R A
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 278 LEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHS 337
+ V M GC PD +TY +L+ AK G + + + G+ P+ TY+ +I+
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINC 473
Query: 338 LSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPD 397
L G+ + M P VT+NIM+ K+ + A+ LY M + PD
Sbjct: 474 LGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPD 533
Query: 398 IVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYS 457
VTY+ ++ L GF++E + + N P Y + +D + G+++ A + Y
Sbjct: 534 KVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQ 593
Query: 458 EMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEM 494
M+ G+ P+ T +SL F V ++ EA LL+ M
Sbjct: 594 AMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSM 630
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 168/421 (39%), Gaps = 39/421 (9%)
Query: 108 VKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIG 167
+K P ++DG T ++ NL + +L++ M R P+ + LI +
Sbjct: 349 LKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRAN 408
Query: 168 QIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYN 227
+ + + N M +G PD +T +I K G+L A+D+ + M +G SPD TY+
Sbjct: 409 YLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYS 468
Query: 228 TIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAME 287
II + G+ A + + + +GC P L+T+ ++I L + AL++ DM
Sbjct: 469 VIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNA 528
Query: 288 GCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGV 347
G PD +TY+ ++ G EE V + + + P+ Y L+ G D
Sbjct: 529 GFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKA 588
Query: 348 DDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLS- 406
+ M + P T N +L+ + + A +L +M++ P + TY LLS
Sbjct: 589 WQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSC 648
Query: 407 ----------GLCKEGFVDEGIQL-LYLLTGTNCSP------------------------ 431
G C + G ++LL P
Sbjct: 649 CTDARSNFDMGFCGQLMAVSGHPAHMFLLKMPPAGPDGQKVRDHVSNFLDFMHSEDRESK 708
Query: 432 -GLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMEL 490
GL+ + +D L + G E A ++ GK + PD + S ++ + + E +
Sbjct: 709 RGLM--DAVVDFLHKSGLKEEAGSVWEVAAGKNVYPDALREKSYSYWLINLHVMSEGTAV 766
Query: 491 L 491
+
Sbjct: 767 I 767
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 117/246 (47%), Gaps = 4/246 (1%)
Query: 323 GMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRA 382
G + + TY T++ +L + ++ +L+ M P VTYN +++ ++ L A
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 383 ISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDG 442
+++++ M C PD VTY TL+ K GF+D + + + SP TY++ I+
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINC 473
Query: 443 LARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIK 502
L + G + +A L+ EM+G+G P+ +T + + E A++L ++M +
Sbjct: 474 LGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPD 533
Query: 503 HTAYRCV--ILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDL 560
Y V +LG C ++ A M R PDE +Y L+ +G V +A
Sbjct: 534 KVTYSIVMEVLGHCG--FLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQW 591
Query: 561 HQRLIE 566
+Q +++
Sbjct: 592 YQAMLQ 597
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 191/447 (42%), Gaps = 48/447 (10%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N + +LC L A L+ R +P + LI+G + ID+ + M
Sbjct: 17 NISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMRE 76
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
+G PDV T N +I G K L + L ++M SG SPD +YNT++ F G E
Sbjct: 77 AGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGE 136
Query: 242 AVSFWKDQLR-KGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLV 300
A + + G P + TY +L++ +C+ A+E+ + + P+++TYN L+
Sbjct: 137 AFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILI 195
Query: 301 SFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIH----------------SLSSHGY- 343
+ K ++ L G PNAVTY T++ + GY
Sbjct: 196 NGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYT 255
Query: 344 WDG---------------VDDVLEIMNETSSPPTR----VTYNIMLNGLCKSGLLDRAIS 384
+DG ++ E M+E TR V+YN +LN K G LD
Sbjct: 256 FDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDD 315
Query: 385 LYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLA 444
L + + PD T+ +++GL G + L + P +VT N IDGL
Sbjct: 316 LLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLC 375
Query: 445 RMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHT 504
+ G ++ A L++ M V DE T++S+ C +L A +LL + K KI +
Sbjct: 376 KAGHVDRAMRLFASM----EVRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPSS 431
Query: 505 AYRCVILGLCK------QRKVDIAIQA 525
A R V+ G+ + RK I I+A
Sbjct: 432 ARRAVLSGIRETVSYQAARKTHIKIKA 458
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 116/440 (26%), Positives = 195/440 (44%), Gaps = 61/440 (13%)
Query: 159 LIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSG 218
++RGL+K I K++NI V S LCK L+ A L+ D G
Sbjct: 1 MVRGLMKFPGIST--KLLNISVNS---------------LCKFRNLERAETLLIDGIRLG 43
Query: 219 CSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRAL 278
PD ITYNT+I+G +EA + + G P + TY LI + R L
Sbjct: 44 VLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVL 103
Query: 279 EVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVI-SNLLSRGMQPNAVTYNTLIHS 337
++ ++M G PD+ +YN+L+S K G + E + ++ ++ G+ P TYN L+ +
Sbjct: 104 QLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDA 163
Query: 338 LSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPD 397
L G+ D ++ + + ++ P +TYNI++NGLCKS + + + P+
Sbjct: 164 LCKSGHTDNAIELFKHL-KSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPN 222
Query: 398 IVTYNTLLSGLCKEGFVDEGIQLL-------YLLTG-TNC-------------------- 429
VTY T+L K +++G+QL Y G NC
Sbjct: 223 AVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMH 282
Query: 430 --------SPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGV 481
S +V+YN ++ + G++++ +L E+ KG+ PD+ TH+ + G +
Sbjct: 283 ELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNI 342
Query: 482 DQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLM-VRSRCKPDEKI 540
A + L + + + C+I GLCK VD A++ M VR DE
Sbjct: 343 GNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR-----DEFT 397
Query: 541 YDALIKAVADSGMVKEANDL 560
Y +++ + G + A+ L
Sbjct: 398 YTSVVHNLCKDGRLVCASKL 417
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 128/291 (43%)
Query: 159 LIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSG 218
++ G +K G +DK + M PDV T N++I G C+ A+DL +M G
Sbjct: 199 VVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKG 258
Query: 219 CSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRAL 278
C P+ +++NT+IRG G E V + + GC T +L++ +CR A
Sbjct: 259 CEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDAC 318
Query: 279 EVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSL 338
++ D+ + P Y SLV + ++ L +G P + TL+ L
Sbjct: 319 GLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGL 378
Query: 339 SSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDI 398
G + +E M P VT+N++L LC S A L S+ PD
Sbjct: 379 RKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDE 438
Query: 399 VTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSM 449
TY+ L+SG KEG EG L+ + + P + TYN +DGL+ G
Sbjct: 439 TTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKF 489
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 122/236 (51%)
Query: 325 QPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAIS 384
+PN YNT+++ G D + M + + P T+NI++NG C+S D A+
Sbjct: 190 KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALD 249
Query: 385 LYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLA 444
L+ M + C P++V++NTL+ G G ++EG+++ Y + C T I +DGL
Sbjct: 250 LFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLC 309
Query: 445 RMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHT 504
R G ++ A L +++ K ++P E + SL CG ++ AME+++E+ KK +
Sbjct: 310 REGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFI 369
Query: 505 AYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDL 560
A ++ GL K + + A ++ M+ + PD ++ L++ + S +AN L
Sbjct: 370 ACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRL 425
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 132/295 (44%)
Query: 184 GVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAV 243
G P+V N V+ G K G + A+ + M PD T+N +I G F+ A+
Sbjct: 189 GKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLAL 248
Query: 244 SFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFT 303
+++ KGC P ++++ LI +++ +M GC T LV
Sbjct: 249 DLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGL 308
Query: 304 AKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTR 363
++G ++ ++ +LL++ + P+ Y +L+ L +++E + + P
Sbjct: 309 CREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCF 368
Query: 364 VTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYL 423
+ ++ GL KSG ++A M++ PD VT+N LL LC + +L L
Sbjct: 369 IACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLL 428
Query: 424 LTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGF 478
+ P TY++ + G + G + + L +EM+ K ++PD T++ L G
Sbjct: 429 ASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGL 483
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 133/309 (43%), Gaps = 36/309 (11%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
+ D T N ++ C + A L M K P+ S LIRG + G+I++G
Sbjct: 224 AKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGV 283
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
K+ M+ G TC +++ GLC+ G + A LV D+
Sbjct: 284 KMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDL------------------- 324
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
L K P Y L+E +C A+RA+E++E++ +G P
Sbjct: 325 ----------------LNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCF 368
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
I +LV K G E+ + +++ G+ P++VT+N L+ L S + + + +
Sbjct: 369 IACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLL 428
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGL-CKEG 412
+ P TY+++++G K G L + M+ + PDI TYN L+ GL C
Sbjct: 429 ASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGK 488
Query: 413 FVDEGIQLL 421
F + +++L
Sbjct: 489 FSRKQVRML 497
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 126/278 (45%), Gaps = 2/278 (0%)
Query: 276 RALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLI 335
+AL + M E PD+ T+N L++ + ++ + + +G +PN V++NTLI
Sbjct: 211 KALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLI 270
Query: 336 HS-LSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESC 394
LSS +GV E++ E + T I+++GLC+ G +D A L ++++
Sbjct: 271 RGFLSSGKIEEGVKMAYEMI-ELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRV 329
Query: 395 FPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKE 454
P Y +L+ LC E ++++ L +P + ++GL + G E A
Sbjct: 330 LPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASG 389
Query: 455 LYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLC 514
+M+ GI+PD +T + L C D +A L K + T Y ++ G
Sbjct: 390 FMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFT 449
Query: 515 KQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSG 552
K+ + ++ M+ PD Y+ L+ ++ +G
Sbjct: 450 KEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTG 487
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 128/320 (40%), Gaps = 5/320 (1%)
Query: 254 CPPYLITYTVLIELVCRYCGAIRALEVLEDMA--MEGCYPDIITYNSLVSFTAKQGVYEE 311
CP + I+ CR AL + M ++G P++ YN++V+ K G ++
Sbjct: 153 CPELEPIFRSAIDAYCRARKMDYALLAFDTMKRLIDG-KPNVGVYNTVVNGYVKSGDMDK 211
Query: 312 TYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLN 371
+ +P+ T+N LI+ +D D+ M E P V++N ++
Sbjct: 212 ALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIR 271
Query: 372 GLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSP 431
G SG ++ + + M+ C T L+ GLC+EG VD+ L+ L P
Sbjct: 272 GFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLP 331
Query: 432 GLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELL 491
Y ++ L A E+ E+ KG P I ++L G + E+A +
Sbjct: 332 SEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFM 391
Query: 492 KEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSR-CKPDEKIYDALIKAVAD 550
++M + ++ LC A L L+ S+ +PDE Y L+
Sbjct: 392 EKMMNAGILPDSVTFNLLLRDLCSSDHSTDA-NRLRLLASSKGYEPDETTYHVLVSGFTK 450
Query: 551 SGMVKEANDLHQRLIEWKIL 570
G KE L +++ +L
Sbjct: 451 EGRRKEGEVLVNEMLDKDML 470
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 119/479 (24%), Positives = 203/479 (42%), Gaps = 47/479 (9%)
Query: 129 CTR-GRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPD 187
CT+ G A +IE + + N + L+ + +ID+ K+ M G V +
Sbjct: 158 CTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVEN 217
Query: 188 VITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFW- 246
V T N+VI CK L A+ + M G P+ +++N +I G G+ A+
Sbjct: 218 VNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLG 277
Query: 247 KDQLRKG--CPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTA 304
K + G P +TY +I C+ A + DM G + TY +LV
Sbjct: 278 KMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYG 337
Query: 305 KQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRV 364
+ G +E + + S+G+ N V YN++++ L G +G VL MN + R
Sbjct: 338 RAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRF 397
Query: 365 TYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLL------------------- 405
T I++ GLC++G + A+ + + DIV +NTL+
Sbjct: 398 TQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSM 457
Query: 406 ----------------SGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSM 449
G KEG ++ +++ + N + LV YN ++GL++ G
Sbjct: 458 LVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMA 517
Query: 450 ESAKELYSEMIGKGIVP-DEITHSSLAWGFCGVDQLEEAMELLKEMHKKD--EKIKHTAY 506
+A+ + + M K IV + + + SL G +EEA ++L +M K+D + + +
Sbjct: 518 GAAEAVVNAMEIKDIVTYNTLLNESLKTG-----NVEEADDILSKMQKQDGEKSVSLVTF 572
Query: 507 RCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLI 565
+I LCK + A + L MV PD Y LI + + ++ +LH LI
Sbjct: 573 NIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLI 631
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 160/364 (43%), Gaps = 6/364 (1%)
Query: 113 FVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKG 172
FV + T N ++ C GRL A R+ M + + + L+ + G D+
Sbjct: 286 FVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEA 345
Query: 173 CKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRG 232
++ + M G V + + N ++ L G ++ A+ ++ DM+ D T ++RG
Sbjct: 346 LRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRG 405
Query: 233 MFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPD 292
+ G EAV F + K ++ + L+ R A ++L M ++G D
Sbjct: 406 LCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLD 465
Query: 293 IITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLE 352
I++ +L+ K+G E + ++ N V YN++++ LS G + V+
Sbjct: 466 AISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVN 525
Query: 353 IMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDI--VTYNTLLSGLCK 410
M VTYN +LN K+G ++ A + S M + + VT+N +++ LCK
Sbjct: 526 AM----EIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCK 581
Query: 411 EGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEIT 470
G ++ ++L + P +TY I ++ S E EL+ +I +G+ P E
Sbjct: 582 FGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHI 641
Query: 471 HSSL 474
+ S+
Sbjct: 642 YLSI 645
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 135/287 (47%), Gaps = 5/287 (1%)
Query: 288 GCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGV 347
G PD+ ++SLV + G + Y VI + G + N + L + D
Sbjct: 145 GSSPDV--FDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRF 202
Query: 348 DDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSG 407
V + M+ T+N+++ CK L A+S++ M+ +P++V++N ++ G
Sbjct: 203 WKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDG 262
Query: 408 LCKEGFVDEGIQLLY---LLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGI 464
CK G + +QLL +++G SP VTYN I+G + G ++ A+ + +M+ G+
Sbjct: 263 ACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGV 322
Query: 465 VPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQ 524
+E T+ +L + +EA+ L EM K + Y ++ L + ++ A+
Sbjct: 323 DCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMS 382
Query: 525 ALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKILK 571
L M + D +++ + +G VKEA + +++ E K+++
Sbjct: 383 VLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVE 429
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 114/241 (47%), Gaps = 7/241 (2%)
Query: 100 ELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNL 159
E V+ + + V D +N ++ + +L A +++ M + S L
Sbjct: 414 EAVEFQRQISEKKLVE-DIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTL 472
Query: 160 IRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGC 219
I G +K G++++ +I + M+ +++ N ++ GL KRG +A +V M +
Sbjct: 473 IDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEI--- 529
Query: 220 SPDAITYNTIIRGMFDKGNFNEAVSFW-KDQLRKGCPPY-LITYTVLIELVCRYCGAIRA 277
D +TYNT++ GN EA K Q + G L+T+ ++I +C++ +A
Sbjct: 530 -KDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKA 588
Query: 278 LEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHS 337
EVL+ M G PD ITY +L++ +K E+ + L+ +G+ P+ Y +++
Sbjct: 589 KEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVRP 648
Query: 338 L 338
L
Sbjct: 649 L 649
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 175/366 (47%), Gaps = 7/366 (1%)
Query: 133 RLMAAARLIEIMAR-KSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGV-PDVIT 190
++M LI+++AR K + +C NL LI G+++ K++ + G+ P+
Sbjct: 142 KVMEMFNLIQVIARVKPSLNAISTCLNL---LIDSGEVNLSRKLLLYAKHNLGLQPNTCI 198
Query: 191 CNMVIGGLCKRGYLKSAVDLVEDMSLSGCS-PDAITYNTIIRGMFDKGNFNEAVSFWKDQ 249
N+++ CK G + A +VE+M SG S P++ITY+T++ +F EAV ++D
Sbjct: 199 FNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDM 258
Query: 250 LRK-GCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGV 308
+ K G P +T+ V+I CR RA ++L+ M GC P++ Y++L++ K G
Sbjct: 259 ISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGK 318
Query: 309 YEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNI 368
+E + G++ + V Y TL++ +G D +L M + +TYN+
Sbjct: 319 IQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNV 378
Query: 369 MLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTN 428
+L GL G + A+ + SE + +Y +L+ LC G +++ ++ L +++
Sbjct: 379 ILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERG 438
Query: 429 CSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAM 488
P T+N + L G E + + G++P + ++ C +L
Sbjct: 439 IWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVF 498
Query: 489 ELLKEM 494
ELL +
Sbjct: 499 ELLDSL 504
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 144/298 (48%), Gaps = 2/298 (0%)
Query: 253 GCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEG-CYPDIITYNSLVSFTAKQGVYEE 311
G P + +L++ C+ A V+E+M G YP+ ITY++L+ +E
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 312 TYLVISNLLSR-GMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIML 370
+ +++S+ G+ P+ VT+N +I+ G + +L+ M + P Y+ ++
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALM 310
Query: 371 NGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCS 430
NG CK G + A + + D V Y TL++ C+ G DE ++LL + + C
Sbjct: 311 NGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCR 370
Query: 431 PGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMEL 490
+TYN+ + GL+ G E A ++ + +G+ ++ ++ + C +LE+A++
Sbjct: 371 ADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKF 430
Query: 491 LKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAV 548
L M ++ H + +++ LC+ +I ++ L +R P K + A+++++
Sbjct: 431 LSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESI 488
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 139/304 (45%), Gaps = 2/304 (0%)
Query: 159 LIRGLIKIGQIDKGCKIINIMVMSG-GVPDVITCNMVIGGLCKRGYLKSAVDLVEDM-SL 216
L++ K G I+ ++ M SG P+ IT + ++ L K AV+L EDM S
Sbjct: 202 LVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISK 261
Query: 217 SGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIR 276
G SPD +T+N +I G G A + GC P + Y+ L+ C+
Sbjct: 262 EGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQE 321
Query: 277 ALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIH 336
A + +++ G D + Y +L++ + G +E ++ + + + + +TYN ++
Sbjct: 322 AKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILR 381
Query: 337 SLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFP 396
LSS G + +L+ + +Y I+LN LC +G L++A+ S M +P
Sbjct: 382 GLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWP 441
Query: 397 DIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELY 456
T+N L+ LC+ G+ + G+++L PG ++ ++ + + + EL
Sbjct: 442 HHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELL 501
Query: 457 SEMI 460
++
Sbjct: 502 DSLV 505
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 142/302 (47%), Gaps = 2/302 (0%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKS-QIPHFPSCTNLIRGLIKIGQIDKGCKIINIMV 180
N ++++ C G + A ++E M R P+ + + L+ L + + ++ M+
Sbjct: 200 NILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMI 259
Query: 181 MSGGV-PDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
G+ PD +T N++I G C+ G ++ A +++ M +GC+P+ Y+ ++ G G
Sbjct: 260 SKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKI 319
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
EA + + + G + YT L+ CR A+++L +M C D +TYN +
Sbjct: 320 QEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVI 379
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS 359
+ + +G EE ++ S G+ N +Y ++++L +G + L +M+E
Sbjct: 380 LRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGI 439
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQ 419
P T+N ++ LC+SG + + + + P ++ ++ +CKE + +
Sbjct: 440 WPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFE 499
Query: 420 LL 421
LL
Sbjct: 500 LL 501
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 158/328 (48%), Gaps = 9/328 (2%)
Query: 245 FWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTA 304
F K +KG TY+VL++ + R+ + +L M E C + +L+ +
Sbjct: 76 FNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFS 135
Query: 305 KQGVYEETYLVIS--NLLSRGMQPNAVTYNTLIHSLSSHGYWD-GVDDVLEIMNETSSPP 361
+ ++++ + + +++R ++P+ +T ++ L G + +L + P
Sbjct: 136 RSDLHDKVMEMFNLIQVIAR-VKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQP 194
Query: 362 TRVTYNIMLNGLCKSGLLDRAISLYSTMV-SESCFPDIVTYNTLLSGLCKEGFVDEGIQL 420
+NI++ CK+G ++ A + M S +P+ +TY+TL+ L E ++L
Sbjct: 195 NTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVEL 254
Query: 421 LY-LLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFC 479
+++ SP VT+N+ I+G R G +E AK++ M G P+ +S+L GFC
Sbjct: 255 FEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFC 314
Query: 480 GVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEK 539
V +++EA + E+ K K+ Y ++ C+ + D A++ L M SRC+ D
Sbjct: 315 KVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTL 374
Query: 540 IYDALIKAVADSGMVKEANDLHQRLIEW 567
Y+ +++ ++ G +EA Q L +W
Sbjct: 375 TYNVILRGLSSEGRSEEA---LQMLDQW 399
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 110/246 (44%)
Query: 93 FERRESGELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPH 152
F S E V+ + + + D T N ++ C G + A ++++ M + P+
Sbjct: 243 FAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPN 302
Query: 153 FPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVE 212
+ + L+ G K+G+I + + + + +G D + ++ C+ G A+ L+
Sbjct: 303 VYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLG 362
Query: 213 DMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYC 272
+M S C D +TYN I+RG+ +G EA+ +G +Y +++ +C
Sbjct: 363 EMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNG 422
Query: 273 GAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYN 332
+A++ L M+ G +P T+N LV + G E V+ L G+ P ++
Sbjct: 423 ELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWG 482
Query: 333 TLIHSL 338
++ S+
Sbjct: 483 AVVESI 488
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 188/429 (43%), Gaps = 12/429 (2%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPH-FPSCTNLIRGLIKIGQIDKG 172
+R D + N++L+ + G + + R+ H + T ++ L + Q
Sbjct: 327 LRIDAYQANQVLKQMNDYGNALG---FFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAI 383
Query: 173 CKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRG 232
K+++ MV G P+ +T N +I + YL A+++ M +GC PD +TY T+I
Sbjct: 384 NKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDI 443
Query: 233 MFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPD 292
G + A+ ++ G P TY+V+I + + A ++ +M +GC P+
Sbjct: 444 HAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 293 IITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLE 352
++TYN ++ AK Y+ + ++ + G +P+ VTY+ ++ L GY + + V
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFT 563
Query: 353 IMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEG 412
M + + P Y ++++ K+G +++A Y M+ P++ T N+LLS +
Sbjct: 564 EMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVN 623
Query: 413 FVDEGIQLLYLLTGTNCSPGLVTYNIAI----DGLARMGSMESAKELYSEMIGKGIVPDE 468
+ E +LL + P L TY + + DG +++ M +L M G
Sbjct: 624 KIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKL-DMGFCGQL---MASTGHPAHM 679
Query: 469 ITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDL 528
A G G + A L MH +D + K V+ L K + + A ++
Sbjct: 680 FLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEV 739
Query: 529 MVRSRCKPD 537
+ PD
Sbjct: 740 AAQKNVFPD 748
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 188/429 (43%), Gaps = 12/429 (2%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPH-FPSCTNLIRGLIKIGQIDKG 172
+R D + N++L+ + G + + R+ H + T ++ L + Q
Sbjct: 327 LRIDAYQANQVLKQMNDYGNALG---FFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAI 383
Query: 173 CKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRG 232
K+++ MV G P+ +T N +I + YL A+++ M +GC PD +TY T+I
Sbjct: 384 NKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDI 443
Query: 233 MFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPD 292
G + A+ ++ G P TY+V+I + + A ++ +M +GC P+
Sbjct: 444 HAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 293 IITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLE 352
++TYN ++ AK Y+ + ++ + G +P+ VTY+ ++ L GY + + V
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFT 563
Query: 353 IMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEG 412
M + + P Y ++++ K+G +++A Y M+ P++ T N+LLS +
Sbjct: 564 EMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVN 623
Query: 413 FVDEGIQLLYLLTGTNCSPGLVTYNIAI----DGLARMGSMESAKELYSEMIGKGIVPDE 468
+ E +LL + P L TY + + DG +++ M +L M G
Sbjct: 624 KIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKL-DMGFCGQL---MASTGHPAHM 679
Query: 469 ITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDL 528
A G G + A L MH +D + K V+ L K + + A ++
Sbjct: 680 FLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEV 739
Query: 529 MVRSRCKPD 537
+ PD
Sbjct: 740 AAQKNVFPD 748
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 188/429 (43%), Gaps = 12/429 (2%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPH-FPSCTNLIRGLIKIGQIDKG 172
+R D + N++L+ + G + + R+ H + T ++ L + Q
Sbjct: 327 LRIDAYQANQVLKQMNDYGNALG---FFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAI 383
Query: 173 CKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRG 232
K+++ MV G P+ +T N +I + YL A+++ M +GC PD +TY T+I
Sbjct: 384 NKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDI 443
Query: 233 MFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPD 292
G + A+ ++ G P TY+V+I + + A ++ +M +GC P+
Sbjct: 444 HAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 293 IITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLE 352
++TYN ++ AK Y+ + ++ + G +P+ VTY+ ++ L GY + + V
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFT 563
Query: 353 IMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEG 412
M + + P Y ++++ K+G +++A Y M+ P++ T N+LLS +
Sbjct: 564 EMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVN 623
Query: 413 FVDEGIQLLYLLTGTNCSPGLVTYNIAI----DGLARMGSMESAKELYSEMIGKGIVPDE 468
+ E +LL + P L TY + + DG +++ M +L M G
Sbjct: 624 KIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKL-DMGFCGQL---MASTGHPAHM 679
Query: 469 ITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDL 528
A G G + A L MH +D + K V+ L K + + A ++
Sbjct: 680 FLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEV 739
Query: 529 MVRSRCKPD 537
+ PD
Sbjct: 740 AAQKNVFPD 748
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 166/400 (41%)
Query: 158 NLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLS 217
++ G + KG + + G P V+T +I K G + A+++ M
Sbjct: 454 TMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEE 513
Query: 218 GCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRA 277
G + TY+ +I G ++ A + ++D +++G P +I Y +I C RA
Sbjct: 514 GVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRA 573
Query: 278 LEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHS 337
++ +++M P T+ ++ AK G + V + G P T+N LI+
Sbjct: 574 IQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLING 633
Query: 338 LSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPD 397
L + ++L+ M TY ++ G G +A ++ + +E D
Sbjct: 634 LVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVD 693
Query: 398 IVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYS 457
I TY LL CK G + + + ++ N YNI IDG AR G + A +L
Sbjct: 694 IFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQ 753
Query: 458 EMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQR 517
+M +G+ PD T++S + A + ++EM K Y +I G +
Sbjct: 754 QMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARAS 813
Query: 518 KVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
+ A+ + M KPD+ +Y L+ ++ + EA
Sbjct: 814 LPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEA 853
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/434 (22%), Positives = 176/434 (40%)
Query: 131 RGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVIT 190
RG + A E M + P T+LI +D+ + M G ++T
Sbjct: 322 RGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVT 381
Query: 191 CNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQL 250
++++GG K G+ ++A ++ + +A Y II N A + ++
Sbjct: 382 YSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREME 441
Query: 251 RKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYE 310
+G + Y +++ + L V + + G P ++TY L++ K G
Sbjct: 442 EEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKIS 501
Query: 311 ETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIML 370
+ V + G++ N TY+ +I+ W V E M + P + YN ++
Sbjct: 502 KALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNII 561
Query: 371 NGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCS 430
+ C G +DRAI M P T+ ++ G K G + +++ ++ C
Sbjct: 562 SAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCV 621
Query: 431 PGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMEL 490
P + T+N I+GL ME A E+ EM G+ +E T++ + G+ V +A E
Sbjct: 622 PTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEY 681
Query: 491 LKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVAD 550
+ + + Y ++ CK ++ A+ M + +Y+ LI A
Sbjct: 682 FTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWAR 741
Query: 551 SGMVKEANDLHQRL 564
G V EA DL Q++
Sbjct: 742 RGDVWEAADLIQQM 755
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 143/305 (46%), Gaps = 4/305 (1%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N I+ C G + A + ++ M + P + +I G K G + + ++ ++M
Sbjct: 558 NNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRR 617
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
G VP V T N +I GL ++ ++ AV+++++M+L+G S + TY I++G G+ +
Sbjct: 618 CGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGK 677
Query: 242 AVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVS 301
A ++ +G + TY L++ C+ AL V ++M+ + YN L+
Sbjct: 678 AFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILID 737
Query: 302 FTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPP 361
A++G E +I + G++P+ TY + I + S G + +E M P
Sbjct: 738 GWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKP 797
Query: 362 TRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLL 421
TY ++ G ++ L ++A+S Y M + PD Y+ LL+ L + E
Sbjct: 798 NIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEA---- 853
Query: 422 YLLTG 426
Y+ +G
Sbjct: 854 YIYSG 858
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/340 (17%), Positives = 131/340 (38%), Gaps = 70/340 (20%)
Query: 291 PDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDV 350
P + +V F ++G + +RG+ P + Y +LIH+ + D
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 366
Query: 351 LEIMNETSSPPTRVTYNIMLNGLCKSGL-------------------------------- 378
+ M E + VTY++++ G K+G
Sbjct: 367 VRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQ 426
Query: 379 ---LDRAISLYSTMVSESCFPDIVTYNTLLSG---------------------------- 407
++RA +L M E I Y+T++ G
Sbjct: 427 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVT 486
Query: 408 -------LCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMI 460
K G + + +++ ++ L TY++ I+G ++ +A ++ +M+
Sbjct: 487 YGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMV 546
Query: 461 GKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVD 520
+G+ PD I ++++ FCG+ ++ A++ +KEM K + + +I G K +
Sbjct: 547 KEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMR 606
Query: 521 IAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDL 560
+++ D+M R C P ++ LI + + +++A ++
Sbjct: 607 RSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEI 646
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 164/361 (45%), Gaps = 15/361 (4%)
Query: 146 RKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLK 205
R ++ + ++R G+ ++ I + + G + + N+++ LCK ++
Sbjct: 148 RGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVE 207
Query: 206 SAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLI 265
A ++ + S +P+A T+N I G EA+ ++ G P +I+YT +I
Sbjct: 208 QARVVLLQLK-SHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTII 266
Query: 266 ELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQ 325
C+ I+ E+L +M G P+ ITY +++S Q +EE V + + G +
Sbjct: 267 RCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCK 326
Query: 326 PNAVTYNTLIHSLSSHGYWDGVDDVLEI-MNETSSPPTRVTYNIMLNGLCKSGLLDRAIS 384
P+++ YN LIH+L+ G + + V + M E TYN M+ C D+AI
Sbjct: 327 PDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIE 386
Query: 385 LYSTMVSES-CFPDIVTYNTLLSGLCKEGFVDE-GIQLLYLLTGTNCSPGLVTYNIAIDG 442
L M S + C PD+ TY LL K G V E G L ++T + S TY I
Sbjct: 387 LLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQR 446
Query: 443 LARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIK 502
L R E A L+ EMI + I P T L LEE + K MH+ E+I+
Sbjct: 447 LCRANMCEWAYCLFEEMISQDITPRHRTCLLL---------LEEVKK--KNMHESAERIE 495
Query: 503 H 503
H
Sbjct: 496 H 496
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 132/306 (43%), Gaps = 4/306 (1%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N +L LC R+ AR++ + + P+ + I G K ++++ I M
Sbjct: 194 NLLLDTLCKEKRV-EQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKG 252
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
G P VI+ +I C++ +++ +M +G P++ITY TI+ + + F E
Sbjct: 253 HGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEE 312
Query: 242 AVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLE-DMAMEGCYPDIITYNSLV 300
A+ R GC P + Y LI + R A V +M G + TYNS++
Sbjct: 313 ALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMI 372
Query: 301 SFTAKQGVYEETYLVISNLLSRGM-QPNAVTYNTLIHSLSSHGYWDGVDDVL-EIMNETS 358
+ ++ ++ + S + P+ TY L+ S G V +L E++ +
Sbjct: 373 AMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHH 432
Query: 359 SPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGI 418
TY ++ LC++ + + A L+ M+S+ P T LL + K+ +
Sbjct: 433 LSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAE 492
Query: 419 QLLYLL 424
++ +++
Sbjct: 493 RIEHIM 498
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 106/236 (44%), Gaps = 2/236 (0%)
Query: 322 RGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDR 381
+G + ++ Y+ + L WD + + +E M IM +G +
Sbjct: 115 KGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIM-RRFAGAGEWEE 173
Query: 382 AISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAID 441
A+ ++ + + + N LL LCKE V++ +++ L ++ +P T+NI I
Sbjct: 174 AVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQA-RVVLLQLKSHITPNAHTFNIFIH 232
Query: 442 GLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKI 501
G + +E A EM G G P I+++++ +C + + E+L EM
Sbjct: 233 GWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPP 292
Query: 502 KHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
Y ++ L Q++ + A++ M RS CKPD Y+ LI +A +G ++EA
Sbjct: 293 NSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEA 348
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 164/361 (45%), Gaps = 15/361 (4%)
Query: 146 RKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLK 205
R ++ + ++R G+ ++ I + + G + + N+++ LCK ++
Sbjct: 148 RGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVE 207
Query: 206 SAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLI 265
A ++ + S +P+A T+N I G EA+ ++ G P +I+YT +I
Sbjct: 208 QARVVLLQLK-SHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTII 266
Query: 266 ELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQ 325
C+ I+ E+L +M G P+ ITY +++S Q +EE V + + G +
Sbjct: 267 RCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCK 326
Query: 326 PNAVTYNTLIHSLSSHGYWDGVDDVLEI-MNETSSPPTRVTYNIMLNGLCKSGLLDRAIS 384
P+++ YN LIH+L+ G + + V + M E TYN M+ C D+AI
Sbjct: 327 PDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIE 386
Query: 385 LYSTMVSES-CFPDIVTYNTLLSGLCKEGFVDE-GIQLLYLLTGTNCSPGLVTYNIAIDG 442
L M S + C PD+ TY LL K G V E G L ++T + S TY I
Sbjct: 387 LLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQR 446
Query: 443 LARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIK 502
L R E A L+ EMI + I P T L LEE + K MH+ E+I+
Sbjct: 447 LCRANMCEWAYCLFEEMISQDITPRHRTCLLL---------LEEVKK--KNMHESAERIE 495
Query: 503 H 503
H
Sbjct: 496 H 496
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 132/306 (43%), Gaps = 4/306 (1%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N +L LC R+ AR++ + + P+ + I G K ++++ I M
Sbjct: 194 NLLLDTLCKEKRV-EQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKG 252
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
G P VI+ +I C++ +++ +M +G P++ITY TI+ + + F E
Sbjct: 253 HGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEE 312
Query: 242 AVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLE-DMAMEGCYPDIITYNSLV 300
A+ R GC P + Y LI + R A V +M G + TYNS++
Sbjct: 313 ALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMI 372
Query: 301 SFTAKQGVYEETYLVISNLLSRGM-QPNAVTYNTLIHSLSSHGYWDGVDDVL-EIMNETS 358
+ ++ ++ + S + P+ TY L+ S G V +L E++ +
Sbjct: 373 AMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHH 432
Query: 359 SPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGI 418
TY ++ LC++ + + A L+ M+S+ P T LL + K+ +
Sbjct: 433 LSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAE 492
Query: 419 QLLYLL 424
++ +++
Sbjct: 493 RIEHIM 498
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 106/236 (44%), Gaps = 2/236 (0%)
Query: 322 RGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDR 381
+G + ++ Y+ + L WD + + +E M IM +G +
Sbjct: 115 KGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIM-RRFAGAGEWEE 173
Query: 382 AISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAID 441
A+ ++ + + + N LL LCKE V++ +++ L ++ +P T+NI I
Sbjct: 174 AVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQA-RVVLLQLKSHITPNAHTFNIFIH 232
Query: 442 GLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKI 501
G + +E A EM G G P I+++++ +C + + E+L EM
Sbjct: 233 GWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPP 292
Query: 502 KHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
Y ++ L Q++ + A++ M RS CKPD Y+ LI +A +G ++EA
Sbjct: 293 NSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEA 348
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 111/474 (23%), Positives = 198/474 (41%), Gaps = 20/474 (4%)
Query: 34 SNHSLRKKSSTLPQIS---SNDCFSTNKSCLAQRRLQCRSFQGSAVIDRVNEVDHEDWGL 90
SNHS RK + + + N LA R+ + + D +E D + W
Sbjct: 16 SNHSQRKLQNNIINVGVKIQNRFRVVCMGMLAPRKFLQKRRKMEVFKDAADETDQKRWRG 75
Query: 91 ESFERRESGELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMA--RKS 148
E +G V + K + G + +L L +L + EI+ R
Sbjct: 76 LMLEIESTGSAVPVLRQYKTDG---DQGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRYQ 132
Query: 149 QIPHFPSCT--NLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKS 206
+F LI K+G + ++++++ G P+VI+ ++ + G +
Sbjct: 133 NWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNN 192
Query: 207 AVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWK---DQLRKGCPPYLITYTV 263
A + M SG P AITY I++ + F EA ++ D+ + P Y +
Sbjct: 193 AEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHM 252
Query: 264 LIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRG 323
+I + + +A +V M +G +TYNSL+SF + Y+E + +
Sbjct: 253 MIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF---ETSYKEVSKIYDQMQRSD 309
Query: 324 MQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAI 383
+QP+ V+Y LI + + V E M + PT YNI+L+ SG++++A
Sbjct: 310 IQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAK 369
Query: 384 SLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGL 443
+++ +M + FPD+ +Y T+LS ++ + + P +VTY I G
Sbjct: 370 TVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGY 429
Query: 444 ARMGSMESAKELYSEMIGKGIVPDEITHSSL--AWGFCGVDQLEEAMELLKEMH 495
A+ +E E+Y +M GI ++ +++ A G C A+ KEM
Sbjct: 430 AKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRC--KNFGSALGWYKEME 481
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 113/271 (41%), Gaps = 35/271 (12%)
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
I + L++ K G + V+S L G PN ++Y L+ S G + + +
Sbjct: 140 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 199
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
M + P+ +TY I+L + A ++ T++ E P
Sbjct: 200 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSP----------------- 242
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSS 473
P Y++ I + G+ E A++++S M+GKG+ +T++S
Sbjct: 243 ---------------LKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNS 287
Query: 474 LAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSR 533
L +E ++ +M + D + +Y +I + R+ + A+ + M+ +
Sbjct: 288 L---MSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAG 344
Query: 534 CKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
+P K Y+ L+ A A SGMV++A + + +
Sbjct: 345 VRPTHKAYNILLDAFAISGMVEQAKTVFKSM 375
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 143/307 (46%), Gaps = 2/307 (0%)
Query: 261 YTVLIELVCRYCGAIRALEVLEDMAMEGCYPDII-TYNSLVSFTAKQGVYEETYLVISNL 319
Y +L+++ CG +A+ L D ++ YP T+N L+ + G+ +
Sbjct: 155 YHLLMKIFAE-CGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKS 213
Query: 320 LSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLL 379
+ +P +YN ++HSL + +D V E M E P +TYNI++ + G
Sbjct: 214 KTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKT 273
Query: 380 DRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIA 439
DR L MV + PD+ TYN LL L + LL + PG++ +
Sbjct: 274 DRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTL 333
Query: 440 IDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDE 499
IDGL+R G +E+ K E + G PD + ++ + G+ +LE+A E+ KEM +K +
Sbjct: 334 IDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQ 393
Query: 500 KIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEAND 559
Y +I G C K A L M C P+ +Y L+ + ++G V EA++
Sbjct: 394 LPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHE 453
Query: 560 LHQRLIE 566
+ + ++E
Sbjct: 454 VVKDMVE 460
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 142/321 (44%), Gaps = 7/321 (2%)
Query: 147 KSQIPHFPSCTNLIRGLI-KIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLK 205
+ H +C +L+ + + G+ C++I+ M+ G T N++I C G
Sbjct: 145 QENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLI---CTCGEAG 201
Query: 206 SAVDLVEDMSLSGC---SPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYT 262
A D+VE S P +YN I+ + + ++ L G P ++TY
Sbjct: 202 LARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYN 261
Query: 263 VLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSR 322
+++ R R +L++M +G PD+ TYN L+ A +++++
Sbjct: 262 IVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREV 321
Query: 323 GMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRA 382
G++P + + TLI LS G + ++ + P V Y +M+ G G L++A
Sbjct: 322 GVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKA 381
Query: 383 ISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDG 442
++ M + P++ TYN+++ G C G E LL + C+P V Y+ ++
Sbjct: 382 EEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNN 441
Query: 443 LARMGSMESAKELYSEMIGKG 463
L G + A E+ +M+ KG
Sbjct: 442 LKNAGKVLEAHEVVKDMVEKG 462
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 132/296 (44%)
Query: 202 GYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITY 261
G K+ L+++M G A T+N +I + G + V + PY +Y
Sbjct: 166 GEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSY 225
Query: 262 TVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLS 321
++ + V E M +G PD++TYN ++ + G + Y ++ ++
Sbjct: 226 NAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVK 285
Query: 322 RGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDR 381
G P+ TYN L+H L++ ++L M E P + + +++GL ++G L+
Sbjct: 286 DGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEA 345
Query: 382 AISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAID 441
V C PD+V Y +++G G +++ ++ +T P + TYN I
Sbjct: 346 CKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIR 405
Query: 442 GLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKK 497
G G + A L EM +G P+ + +S+L ++ EA E++K+M +K
Sbjct: 406 GFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEK 461
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 91/179 (50%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D +T N +L +L T + +AA L+ M P T LI GL + G+++ +
Sbjct: 291 DLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFM 350
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
+ V G PDV+ ++I G G L+ A ++ ++M+ G P+ TYN++IRG
Sbjct: 351 DETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMA 410
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIIT 295
G F EA + K+ +GC P + Y+ L+ + + A EV++DM +G Y +I+
Sbjct: 411 GKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLIS 469
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 124/290 (42%), Gaps = 7/290 (2%)
Query: 117 DGFTNNKILQNL--CTRGRLMAAARLIEIMARKSQI---PHFPSCTNLIRGLIKIGQIDK 171
DG+ NL CT G A ++E + P+ S ++ L+ + Q
Sbjct: 181 DGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKL 240
Query: 172 GCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIR 231
+ M+ G PDV+T N+V+ + G L+++M G SPD TYN ++
Sbjct: 241 IDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLH 300
Query: 232 GMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAME-GCY 290
+ A++ G P +I +T LI+ + R G + A + D ++ GC
Sbjct: 301 HLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSR-AGKLEACKYFMDETVKVGCT 359
Query: 291 PDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDV 350
PD++ Y +++ G E+ + + +G PN TYN++I G + +
Sbjct: 360 PDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACAL 419
Query: 351 LEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVT 400
L+ M P V Y+ ++N L +G + A + MV + + +++
Sbjct: 420 LKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLIS 469
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 183/424 (43%), Gaps = 5/424 (1%)
Query: 142 EIMARKSQIPHFPSCTNL-IRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCK 200
E + RKS C NL I + Q + + ++ S VP T ++I C
Sbjct: 143 EWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCM 202
Query: 201 RGYLKSAVDLVEDMSLSGCSPDAI---TYNTIIRGMFD-KGNFNEAVSFWKDQLRKGCPP 256
G ++ A ++ +M SP I YN I G+ KGN EA+ ++ R C P
Sbjct: 203 AGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKP 262
Query: 257 YLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVI 316
TY ++I L + + + ++ +M C P+I TY +LV+ A++G+ E+ +
Sbjct: 263 TTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIF 322
Query: 317 SNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKS 376
L G++P+ YN L+ S S GY G ++ +M P R +YNIM++ ++
Sbjct: 323 EQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRA 382
Query: 377 GLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTY 436
GL A +++ M P + ++ LLS K V + ++ ++ P
Sbjct: 383 GLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVL 442
Query: 437 NIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHK 496
N ++ R+G +++ +EM D T++ L + LE EL E+ +
Sbjct: 443 NSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKE 502
Query: 497 KDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKE 556
K+ + + I +++ ++ + M+ S C PD L+ A + V++
Sbjct: 503 KNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQ 562
Query: 557 ANDL 560
+
Sbjct: 563 VTSV 566
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 143/348 (41%), Gaps = 42/348 (12%)
Query: 188 VITCNMVIGGLCKR-GYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFW 246
V N I GL KR G + A+D+ + M C P TYN +I G +++ W
Sbjct: 228 VTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLY---GKASKSYMSW 284
Query: 247 K---DQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFT 303
K + C P + TYT L+ R +A E+ E + +G PD+ YN+L+
Sbjct: 285 KLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESY 344
Query: 304 AKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTR 363
++ G + S + G +P+ +YN ++ + G + V E M PT
Sbjct: 345 SRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTM 404
Query: 364 VTYNIMLNGLCKSG----------------------LLDRAISLY-------------ST 388
++ ++L+ K+ +L+ ++LY +
Sbjct: 405 KSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAE 464
Query: 389 MVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGS 448
M + C DI TYN L++ K GF++ +L L N P +VT+ I +R
Sbjct: 465 MENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKL 524
Query: 449 MESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHK 496
E++ EMI G PD T L +Q+E+ +L+ MHK
Sbjct: 525 YVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHK 572
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/295 (20%), Positives = 132/295 (44%), Gaps = 4/295 (1%)
Query: 151 PHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDL 210
P+ + T L+ + G +K +I + G PDV N ++ + GY A ++
Sbjct: 297 PNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEI 356
Query: 211 VEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCR 270
M GC PD +YN ++ G ++A + +++ R G P + ++ +L+ +
Sbjct: 357 FSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSK 416
Query: 271 YCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVT 330
+ ++++M+ G PD NS+++ + G + + +++ + + + T
Sbjct: 417 ARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIST 476
Query: 331 YNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMV 390
YN LI+ G+ + ++++ + E + P VT+ + + L + + ++ M+
Sbjct: 477 YNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMI 536
Query: 391 SESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLL----TGTNCSPGLVTYNIAID 441
C PD T LLS E V++ +L + T ++ P L+ ++ ++
Sbjct: 537 DSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGVTVSSLVPKLMAKSLTVN 591
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 107/250 (42%), Gaps = 4/250 (1%)
Query: 319 LLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGL 378
L QP+ + +N LI + + + + + E+ PT TY +++ C +GL
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 205
Query: 379 LDRAISLYSTMVSESCFPD---IVTYNTLLSGLCK-EGFVDEGIQLLYLLTGTNCSPGLV 434
++RA + M + P + YN + GL K +G +E I + + C P
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 265
Query: 435 TYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEM 494
TYN+ I+ + + +LY EM P+ T+++L F E+A E+ +++
Sbjct: 266 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 325
Query: 495 HKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMV 554
+ + Y ++ + A + LM C+PD Y+ ++ A +G+
Sbjct: 326 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 385
Query: 555 KEANDLHQRL 564
+A + + +
Sbjct: 386 SDAEAVFEEM 395
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 94/214 (43%), Gaps = 5/214 (2%)
Query: 344 WDGVDDVLE-IMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYN 402
WD + V E I+ ++S P + +N++++ + A SLY ++ P TY
Sbjct: 135 WDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYA 194
Query: 403 TLLSGLCKEGFVDEGIQLLYLLTGTNCSP---GLVTYNIAIDGL-ARMGSMESAKELYSE 458
L+ C G ++ +L + + SP G+ YN I+GL R G+ E A +++
Sbjct: 195 LLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQR 254
Query: 459 MIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRK 518
M P T++ + + + + +L EM K Y ++ ++
Sbjct: 255 MKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGL 314
Query: 519 VDIAIQALDLMVRSRCKPDEKIYDALIKAVADSG 552
+ A + + + +PD +Y+AL+++ + +G
Sbjct: 315 CEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAG 348
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/240 (18%), Positives = 96/240 (40%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D + N ++++ G AA + +M P S ++ + G +
Sbjct: 333 DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVF 392
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
M G P + + +++ K + +V++MS +G PD N+++
Sbjct: 393 EEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRL 452
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
G F + + C + TY +LI + + R E+ ++ + PD++T+
Sbjct: 453 GQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTW 512
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
S + +++ +Y + V ++ G P+ T L+ + SS + V VL M++
Sbjct: 513 TSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHK 572
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 183/424 (43%), Gaps = 5/424 (1%)
Query: 142 EIMARKSQIPHFPSCTNL-IRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCK 200
E + RKS C NL I + Q + + ++ S VP T ++I C
Sbjct: 165 EWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCM 224
Query: 201 RGYLKSAVDLVEDMSLSGCSPDAI---TYNTIIRGMFD-KGNFNEAVSFWKDQLRKGCPP 256
G ++ A ++ +M SP I YN I G+ KGN EA+ ++ R C P
Sbjct: 225 AGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKP 284
Query: 257 YLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVI 316
TY ++I L + + + ++ +M C P+I TY +LV+ A++G+ E+ +
Sbjct: 285 TTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIF 344
Query: 317 SNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKS 376
L G++P+ YN L+ S S GY G ++ +M P R +YNIM++ ++
Sbjct: 345 EQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRA 404
Query: 377 GLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTY 436
GL A +++ M P + ++ LLS K V + ++ ++ P
Sbjct: 405 GLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVL 464
Query: 437 NIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHK 496
N ++ R+G +++ +EM D T++ L + LE EL E+ +
Sbjct: 465 NSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKE 524
Query: 497 KDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKE 556
K+ + + I +++ ++ + M+ S C PD L+ A + V++
Sbjct: 525 KNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQ 584
Query: 557 ANDL 560
+
Sbjct: 585 VTSV 588
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 143/348 (41%), Gaps = 42/348 (12%)
Query: 188 VITCNMVIGGLCKR-GYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFW 246
V N I GL KR G + A+D+ + M C P TYN +I G +++ W
Sbjct: 250 VTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLY---GKASKSYMSW 306
Query: 247 K---DQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFT 303
K + C P + TYT L+ R +A E+ E + +G PD+ YN+L+
Sbjct: 307 KLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESY 366
Query: 304 AKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTR 363
++ G + S + G +P+ +YN ++ + G + V E M PT
Sbjct: 367 SRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTM 426
Query: 364 VTYNIMLNGLCKSG----------------------LLDRAISLY-------------ST 388
++ ++L+ K+ +L+ ++LY +
Sbjct: 427 KSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAE 486
Query: 389 MVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGS 448
M + C DI TYN L++ K GF++ +L L N P +VT+ I +R
Sbjct: 487 MENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKL 546
Query: 449 MESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHK 496
E++ EMI G PD T L +Q+E+ +L+ MHK
Sbjct: 547 YVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHK 594
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 121/271 (44%)
Query: 151 PHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDL 210
P+ + T L+ + G +K +I + G PDV N ++ + GY A ++
Sbjct: 319 PNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEI 378
Query: 211 VEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCR 270
M GC PD +YN ++ G ++A + +++ R G P + ++ +L+ +
Sbjct: 379 FSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSK 438
Query: 271 YCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVT 330
+ ++++M+ G PD NS+++ + G + + +++ + + + T
Sbjct: 439 ARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIST 498
Query: 331 YNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMV 390
YN LI+ G+ + ++++ + E + P VT+ + + L + + ++ M+
Sbjct: 499 YNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMI 558
Query: 391 SESCFPDIVTYNTLLSGLCKEGFVDEGIQLL 421
C PD T LLS E V++ +L
Sbjct: 559 DSGCAPDGGTAKVLLSACSSEEQVEQVTSVL 589
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 107/250 (42%), Gaps = 4/250 (1%)
Query: 319 LLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGL 378
L QP+ + +N LI + + + + + E+ PT TY +++ C +GL
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 227
Query: 379 LDRAISLYSTMVSESCFPD---IVTYNTLLSGLCK-EGFVDEGIQLLYLLTGTNCSPGLV 434
++RA + M + P + YN + GL K +G +E I + + C P
Sbjct: 228 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 287
Query: 435 TYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEM 494
TYN+ I+ + + +LY EM P+ T+++L F E+A E+ +++
Sbjct: 288 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 347
Query: 495 HKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMV 554
+ + Y ++ + A + LM C+PD Y+ ++ A +G+
Sbjct: 348 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 407
Query: 555 KEANDLHQRL 564
+A + + +
Sbjct: 408 SDAEAVFEEM 417
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 94/214 (43%), Gaps = 5/214 (2%)
Query: 344 WDGVDDVLE-IMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYN 402
WD + V E I+ ++S P + +N++++ + A SLY ++ P TY
Sbjct: 157 WDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYA 216
Query: 403 TLLSGLCKEGFVDEGIQLLYLLTGTNCSP---GLVTYNIAIDGL-ARMGSMESAKELYSE 458
L+ C G ++ +L + + SP G+ YN I+GL R G+ E A +++
Sbjct: 217 LLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQR 276
Query: 459 MIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRK 518
M P T++ + + + + +L EM K Y ++ ++
Sbjct: 277 MKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGL 336
Query: 519 VDIAIQALDLMVRSRCKPDEKIYDALIKAVADSG 552
+ A + + + +PD +Y+AL+++ + +G
Sbjct: 337 CEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAG 370
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/240 (18%), Positives = 96/240 (40%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D + N ++++ G AA + +M P S ++ + G +
Sbjct: 355 DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVF 414
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
M G P + + +++ K + +V++MS +G PD N+++
Sbjct: 415 EEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRL 474
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
G F + + C + TY +LI + + R E+ ++ + PD++T+
Sbjct: 475 GQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTW 534
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
S + +++ +Y + V ++ G P+ T L+ + SS + V VL M++
Sbjct: 535 TSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHK 594
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 180/410 (43%), Gaps = 26/410 (6%)
Query: 156 CTNL-IRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDM 214
C N+ L K+G++++ +++ M G VPDVI +I G C +G + A+DL+++M
Sbjct: 390 CYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEM 449
Query: 215 SLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGA 274
+G SPD ITYN ++ G+ G+ E + ++ +G P +T +V+IE +C
Sbjct: 450 IGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLC----F 505
Query: 275 IRALEVLEDM--AMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYN 332
R ++ ED ++E P+ S V + G+ ++ Y L Y
Sbjct: 506 ARKVKEAEDFFSSLEQKCPE--NKASFVKGYCEAGLSKKAYKAFVRL---EYPLRKSVYI 560
Query: 333 TLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSE 392
L SL GY + DVL+ M+ P R M+ CK + A L+ TMV
Sbjct: 561 KLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVER 620
Query: 393 SCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMG----- 447
PD+ TY ++ C+ + + L + P +VTY + +D ++
Sbjct: 621 GLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHE 680
Query: 448 --------SMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDE 499
A E+ E GI D + ++ L C ++ LE+A EL M
Sbjct: 681 TCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGL 740
Query: 500 KIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVA 549
+ AY +I ++ +D+A+ + + + P E ++A +K+ A
Sbjct: 741 EPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSES-FEAAVKSAA 789
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 156/341 (45%), Gaps = 16/341 (4%)
Query: 166 IGQIDKGCKIINI---------MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSL 216
+ ID+ CK +N+ M+ G + + ++++ CK A++ ++
Sbjct: 322 LAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRD 381
Query: 217 SGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIR 276
D + YN + G EA ++ +G P +I YT LI+ C +
Sbjct: 382 MNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVD 441
Query: 277 ALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIH 336
AL+++++M G PD+ITYN LVS A+ G EE + + + G +PNAVT + +I
Sbjct: 442 ALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIE 501
Query: 337 SLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFP 396
L +D + E P + ++ + G C++GL +A Y V
Sbjct: 502 GLCFARKVKEAEDFFSSL-EQKCPENKASF---VKGYCEAGLSKKA---YKAFVRLEYPL 554
Query: 397 DIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELY 456
Y L LC EG++++ +L ++ PG I ++ ++ A+ L+
Sbjct: 555 RKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLF 614
Query: 457 SEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKK 497
M+ +G++PD T++ + +C +++L++A L ++M ++
Sbjct: 615 DTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQR 655
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 191/422 (45%), Gaps = 24/422 (5%)
Query: 155 SCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLK-SAVDLVED 213
+C L+ + + G+I + + G + T +V+ LC++G L+ +A+ L+E+
Sbjct: 183 ACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIEN 242
Query: 214 MSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCG 273
S+ G Y T I G+ G +AV+ + + + VL +V +C
Sbjct: 243 ESVFG-------YKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCN 295
Query: 274 AIR---ALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVT 330
++ A V+ +M G D+ +++ K E + +L +G++ N V
Sbjct: 296 EMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVI 355
Query: 331 YNTLIHSLSSHGYWDGVDDVLEIMNETSSPPT---RVTYNIMLNGLCKSGLLDRAISLYS 387
+ + L + D + LE E RV YN+ + L K G ++ A L
Sbjct: 356 VSLI---LQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQ 412
Query: 388 TMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMG 447
M PD++ Y TL+ G C +G V + + L+ + G SP L+TYN+ + GLAR G
Sbjct: 413 EMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNG 472
Query: 448 SMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYR 507
E E+Y M +G P+ +T+S + G C +++EA + + +K + K +
Sbjct: 473 HEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKAS--- 529
Query: 508 CVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEW 567
+ G C + ++ +A VR + +Y L ++ G +++A+D+ +++ +
Sbjct: 530 -FVKGYC---EAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAY 585
Query: 568 KI 569
++
Sbjct: 586 RV 587
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 148/368 (40%), Gaps = 13/368 (3%)
Query: 202 GYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITY 261
G A D++ C D N ++ M + G ++ +K + G TY
Sbjct: 160 GMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTY 219
Query: 262 TVLIELVCRYCGAIRALEVLEDMAMEGCYPD-IITYNSLVSFTAKQGVYEETYLVISNLL 320
++++ +CR LE+ AM + + Y + ++ G E+ +I L+
Sbjct: 220 AIVVKALCRKGN-------LEEAAMLLIENESVFGYKTFINGLCVTGETEKAVALILELI 272
Query: 321 SR----GMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKS 376
R G AV ++ + + V+ M E +++ CK+
Sbjct: 273 DRKYLAGDDLRAVL-GMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKN 331
Query: 377 GLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTY 436
L A+ M+ + + V + +L CK E ++ N V Y
Sbjct: 332 MNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCY 391
Query: 437 NIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHK 496
N+A D L+++G +E A EL EM +GIVPD I +++L G+C ++ +A++L+ EM
Sbjct: 392 NVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIG 451
Query: 497 KDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKE 556
Y ++ GL + + ++ + M KP+ +I+ + + VKE
Sbjct: 452 NGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKE 511
Query: 557 ANDLHQRL 564
A D L
Sbjct: 512 AEDFFSSL 519
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 189/436 (43%), Gaps = 26/436 (5%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
+ K++ L RGR A + + +A P S T L+ + Q I++ +
Sbjct: 47 SRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEV 106
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
SG D I N VI + G ++ AV + M G +P TYNT+I+G G
Sbjct: 107 EQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKP 166
Query: 240 NEAVSFWKDQLRKG---CPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
+ L +G P + T+ VL++ C+ A EV++ M G PD +TY
Sbjct: 167 ERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTY 226
Query: 297 NSLVSFTAKQG--VYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHG-YWDGVDDVLEI 353
N++ + ++G V E+ +V ++ +PN T ++ G DG+ V
Sbjct: 227 NTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRR- 285
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKE-- 411
M E V +N ++NG + ++DR D VT LL +E
Sbjct: 286 MKEMRVEANLVVFNSLINGFVE--VMDRD------------GIDEVTLTLLLMSFNEEVE 331
Query: 412 --GFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEI 469
G +Q+L L+ N ++TY+ ++ + G ME A +++ EM+ G+ PD
Sbjct: 332 LVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAH 391
Query: 470 THSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLM 529
+S LA G+ + ++A ELL E + + + VI G C +D A++ + M
Sbjct: 392 AYSILAKGYVRAKEPKKAEELL-ETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKM 450
Query: 530 VRSRCKPDEKIYDALI 545
+ P+ K ++ L+
Sbjct: 451 CKFGVSPNIKTFETLM 466
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 179/409 (43%), Gaps = 34/409 (8%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D N ++ G + A + + M P + LI+G G+ ++ +++
Sbjct: 114 DSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELL 173
Query: 177 NIMVMSGGV---PDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
++M+ G V P++ T N+++ CK+ ++ A ++V+ M G PD +TYNTI
Sbjct: 174 DLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCY 233
Query: 234 FDKGNFNEAVS--FWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYP 291
KG A S K +++ P T +++ CR L + M
Sbjct: 234 VQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEA 293
Query: 292 DIITYNSL----VSFTAKQGVYEETYL---------------------VISNLLSRGMQP 326
+++ +NSL V + G+ E T V++ + ++
Sbjct: 294 NLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKA 353
Query: 327 NAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLY 386
+ +TY+T++++ SS GY + V + M + P Y+I+ G ++ +A L
Sbjct: 354 DVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELL 413
Query: 387 STMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARM 446
T++ ES P++V + T++SG C G +D+ +++ + SP + T+ + G +
Sbjct: 414 ETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEV 472
Query: 447 GSMESAKELYSEMIGKGIVPDEITHSSL--AWGFCGV-DQLEEAMELLK 492
A+E+ M G G+ P+ T L AW G+ D+ +A+ LK
Sbjct: 473 KQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALK 521
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 157/382 (41%), Gaps = 68/382 (17%)
Query: 233 MFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIE--LVCRYCGAIRALEVLEDMAMEGCY 290
+ ++G +EA + +K G P LI+YT L+ V + G+I + ++ ++ G
Sbjct: 55 LIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISS--IVSEVEQSGTK 112
Query: 291 PDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDV 350
D I +N++++ ++ G E+ + + G+ P TYNTLI G + ++
Sbjct: 113 LDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSEL 172
Query: 351 LEIMNETSS---PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTL--- 404
L++M E + P T+N+++ CK ++ A + M PD VTYNT+
Sbjct: 173 LDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATC 232
Query: 405 ----------------------------------LSGLCKEGFVDEGIQLLYLLTGTNCS 430
+ G C+EG V +G++ + +
Sbjct: 233 YVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVE 292
Query: 431 PGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGF------CGVDQL 484
LV +N I+G + M GI DE+T + L F G ++
Sbjct: 293 ANLVVFNSLINGFVEV------------MDRDGI--DEVTLTLLLMSFNEEVELVGNQKM 338
Query: 485 E-EAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDA 543
+ + + L+KE + K + I Y V+ ++ A Q MV++ KPD Y
Sbjct: 339 KVQVLTLMKECNVKADVI---TYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSI 395
Query: 544 LIKAVADSGMVKEANDLHQRLI 565
L K + K+A +L + LI
Sbjct: 396 LAKGYVRAKEPKKAEELLETLI 417
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 137/320 (42%), Gaps = 30/320 (9%)
Query: 277 ALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIH 336
A V + +A G P +I+Y +L++ Q Y ++S + G + +++ +N +I+
Sbjct: 64 AQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVIN 123
Query: 337 SLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCF- 395
+ S G + L M E PT TYN ++ G +G +R+ L M+ E
Sbjct: 124 AFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVD 183
Query: 396 --PDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYN-IAIDGLARMGSMESA 452
P+I T+N L+ CK+ V+E +++ + P VTYN IA + + ++ +
Sbjct: 184 VGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAE 243
Query: 453 KELYSEMIGKGIV-PDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVIL 511
E+ +M+ K P+ T + G+C ++ + + ++ M + + + +I
Sbjct: 244 SEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLIN 303
Query: 512 GLCKQRKVD-------------------------IAIQALDLMVRSRCKPDEKIYDALIK 546
G + D + +Q L LM K D Y ++
Sbjct: 304 GFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMN 363
Query: 547 AVADSGMVKEANDLHQRLIE 566
A + +G +++A + + +++
Sbjct: 364 AWSSAGYMEKAAQVFKEMVK 383
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 117/257 (45%), Gaps = 5/257 (1%)
Query: 299 LVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETS 358
L++ ++G E V L G +P+ ++Y TL+ +++ + + ++ + ++
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 359 SPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGI 418
+ + +N ++N +SG ++ A+ M P TYNTL+ G G +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 419 QLLYLLT---GTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLA 475
+LL L+ + P + T+N+ + + +E A E+ +M G+ PD +T++++A
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIA 230
Query: 476 WGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRC--VILGLCKQRKVDIAIQALDLMVRSR 533
+ + A + E EK K C V+ G C++ +V ++ + M R
Sbjct: 231 TCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMR 290
Query: 534 CKPDEKIYDALIKAVAD 550
+ + ++++LI +
Sbjct: 291 VEANLVVFNSLINGFVE 307
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 96/214 (44%), Gaps = 4/214 (1%)
Query: 356 ETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVD 415
E SS T + ++N L + G A +++ T+ P +++Y TLL+ + +
Sbjct: 38 EGSSCRTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYG 97
Query: 416 EGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLA 475
++ + + + +N I+ + G+ME A + +M G+ P T+++L
Sbjct: 98 SISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLI 157
Query: 476 WGFCGVDQLEEAMELLKEMHKK---DEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRS 532
G+ + E + ELL M ++ D + ++ CK++KV+ A + + M
Sbjct: 158 KGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEEC 217
Query: 533 RCKPDEKIYDALIKAVADSG-MVKEANDLHQRLI 565
+PD Y+ + G V+ +++ ++++
Sbjct: 218 GVRPDTVTYNTIATCYVQKGETVRAESEVVEKMV 251
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 5/281 (1%)
Query: 192 NMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLR 251
N ++ L + G ++ L +M SPD T+NT++ G G EA + ++
Sbjct: 124 NNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQ 183
Query: 252 KGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVS--FTAKQGVY 309
GC P TYT I CR A +V ++M GC+ + ++Y L+ F AK+
Sbjct: 184 AGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKK--I 241
Query: 310 EETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIM 369
+E ++ + PN TY LI +L G ++ + M+E+ P Y ++
Sbjct: 242 DEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVL 301
Query: 370 LNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNC 429
+ C LD A L M+ P+++TYN L+ G CK+ V + + LL + N
Sbjct: 302 IQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNL 360
Query: 430 SPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEIT 470
P L+TYN I G G+++SA L S M G+VP++ T
Sbjct: 361 VPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 121/265 (45%), Gaps = 1/265 (0%)
Query: 296 YNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMN 355
YN+L+S A+ G+ EE + + +L + P+ T+NTL++ GY + +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 356 ETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVD 415
+ P TY + G C+ +D A ++ M C + V+Y L+ GL + +D
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 416 EGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLA 475
E + LL + NC P + TY + ID L G A L+ +M GI PD+ ++ L
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 476 WGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCK 535
FC D L+EA LL+ M + Y +I G CK + V A+ L M+
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLV 361
Query: 536 PDEKIYDALIKAVADSGMVKEANDL 560
PD Y+ LI SG + A L
Sbjct: 362 PDLITYNTLIAGQCSSGNLDSAYRL 386
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 126/276 (45%), Gaps = 1/276 (0%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N +L +L G + RL M P + L+ G K+G + + + + ++
Sbjct: 124 NNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQ 183
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
+G PD T I G C+R + +A + ++M+ +GC + ++Y +I G+F+ +E
Sbjct: 184 AGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDE 243
Query: 242 AVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVS 301
A+S C P + TYTVLI+ +C A+ + + M+ G PD Y L+
Sbjct: 244 ALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQ 303
Query: 302 FTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPP 361
+E ++ ++L G+ PN +TYN LI + +L M E + P
Sbjct: 304 SFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVHKAM-GLLSKMLEQNLVP 362
Query: 362 TRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPD 397
+TYN ++ G C SG LD A L S M P+
Sbjct: 363 DLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 123/261 (47%), Gaps = 5/261 (1%)
Query: 279 EVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSL 338
E+LED+ PDI T+N+LV+ K G E ++ L+ G P+ TY + I
Sbjct: 145 EMLEDLVS----PDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGH 200
Query: 339 SSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDI 398
D V + M + V+Y ++ GL ++ +D A+SL M ++C P++
Sbjct: 201 CRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNV 260
Query: 399 VTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSE 458
TY L+ LC G E + L ++ + P Y + I +++ A L
Sbjct: 261 RTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEH 320
Query: 459 MIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRK 518
M+ G++P+ IT+++L GFC + +AM LL +M +++ Y +I G C
Sbjct: 321 MLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGN 379
Query: 519 VDIAIQALDLMVRSRCKPDEK 539
+D A + L LM S P+++
Sbjct: 380 LDSAYRLLSLMEESGLVPNQR 400
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 119/271 (43%), Gaps = 1/271 (0%)
Query: 226 YNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMA 285
YN ++ + G E + + L P + T+ L+ C+ + A + + +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 286 MEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWD 345
GC PD TY S ++ ++ + + V + G N V+Y LI+ L D
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 346 GVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLL 405
+L M + + P TY ++++ LC SG A++L+ M PD Y L+
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 406 SGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIV 465
C +DE LL + P ++TYN I G + ++ A L S+M+ + +V
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLV 361
Query: 466 PDEITHSSLAWGFCGVDQLEEAMELLKEMHK 496
PD IT+++L G C L+ A LL M +
Sbjct: 362 PDLITYNTLIAGQCSSGNLDSAYRLLSLMEE 392
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 120/253 (47%), Gaps = 1/253 (0%)
Query: 113 FVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKG 172
V D +T N ++ C G ++ A + + + + P + + T+ I G + ++D
Sbjct: 150 LVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAA 209
Query: 173 CKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRG 232
K+ M +G + ++ +I GL + + A+ L+ M C P+ TY +I
Sbjct: 210 FKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDA 269
Query: 233 MFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPD 292
+ G +EA++ +K G P YTVLI+ C A +LE M G P+
Sbjct: 270 LCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPN 329
Query: 293 IITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLE 352
+ITYN+L+ K+ V++ L +S +L + + P+ +TYNTLI S G D +L
Sbjct: 330 VITYNALIKGFCKKNVHKAMGL-LSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLS 388
Query: 353 IMNETSSPPTRVT 365
+M E+ P + T
Sbjct: 389 LMEESGLVPNQRT 401
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 168/378 (44%), Gaps = 6/378 (1%)
Query: 119 FTNNKILQNLCTRG---RLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKI 175
F+ + L + C+RG L+ +++ M + P+ ++R + G + + ++
Sbjct: 175 FSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQV 234
Query: 176 INIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFD 235
+ +M+ SG V +M++ G + G + AVDL M GCSP+ +TY ++I+G D
Sbjct: 235 VGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVD 294
Query: 236 KGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIIT 295
G +EA + +G P ++ ++I R A +V + PD T
Sbjct: 295 LGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYT 354
Query: 296 YNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMN 355
+ S++S G ++ + + G + VT N L + S GY VL IM+
Sbjct: 355 FASILSSLCLSGKFDLVPRITHGI---GTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMS 411
Query: 356 ETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVD 415
TY + L+ LC+ G AI +Y ++ E D ++ ++ L + G +
Sbjct: 412 YKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYN 471
Query: 416 EGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLA 475
+ L +V+Y +AI GL R +E A L +M GI P+ T+ ++
Sbjct: 472 TAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTII 531
Query: 476 WGFCGVDQLEEAMELLKE 493
G C + E+ ++L+E
Sbjct: 532 SGLCKEKETEKVRKILRE 549
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 154/350 (44%), Gaps = 4/350 (1%)
Query: 172 GCKII-NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTII 230
G KI+ M+ G P+ ++ C+ G + A +V M SG S ++ ++
Sbjct: 195 GVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLV 254
Query: 231 RGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCY 290
G F G +AV + ++ GC P L+TYT LI+ A VL + EG
Sbjct: 255 SGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLA 314
Query: 291 PDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDV 350
PDI+ N ++ + G +EE V ++L R + P+ T+ +++ SL G +D V
Sbjct: 315 PDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVP-- 372
Query: 351 LEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCK 410
I + + VT N++ N K G A+ + S M + D TY LS LC+
Sbjct: 373 -RITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCR 431
Query: 411 EGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEIT 470
G I++ ++ ++ ID L +G +A L+ I + D ++
Sbjct: 432 GGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVS 491
Query: 471 HSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVD 520
++ G ++EEA L +M + YR +I GLCK+++ +
Sbjct: 492 YTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETE 541
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 158/356 (44%), Gaps = 8/356 (2%)
Query: 201 RGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLIT 260
RG L +++ M G P+ + I+R G +EA + G +
Sbjct: 190 RGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNV 249
Query: 261 YTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLL 320
+++L+ R +A+++ M GC P+++TY SL+ G+ +E + V+S +
Sbjct: 250 WSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQ 309
Query: 321 SRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLD 380
S G+ P+ V N +IH+ + G ++ V + + P + T+ +L+ LC SG D
Sbjct: 310 SEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFD 369
Query: 381 RAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAI 440
+ + ++ D+VT N L + K G+ +++L +++ + + TY + +
Sbjct: 370 LVPRITHGIGTDF---DLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYL 426
Query: 441 DGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEK 500
L R G+ +A ++Y +I + D HS++ + + A+ L K +
Sbjct: 427 SALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYP 486
Query: 501 IKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKE 556
+ +Y I GL + ++++ A M P+ + Y +I SG+ KE
Sbjct: 487 LDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTII-----SGLCKE 537
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/388 (18%), Positives = 159/388 (40%), Gaps = 33/388 (8%)
Query: 210 LVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVC 269
++E + +SGC + ++ + +++A+ + G P +++++
Sbjct: 95 IIERLKISGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNF 154
Query: 270 RYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAV 329
+ ALE+ E + + I + S +G +V+ ++ G PN
Sbjct: 155 KLNVVNGALEIFEGIRFRNFFSFDIALSHFCS-RGGRGDLVGVKIVLKRMIGEGFYPNRE 213
Query: 330 TYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTM 389
+ ++ G V+ +M + + ++++++G +SG +A+ L++ M
Sbjct: 214 RFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKM 273
Query: 390 VSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSM 449
+ C P++VTY +L+ G G VDE +L + +P +V N+ I R+G
Sbjct: 274 IQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRF 333
Query: 450 ESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLE------------------------ 485
E A+++++ + + +VPD+ T +S+ C + +
Sbjct: 334 EEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNC 393
Query: 486 --------EAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPD 537
A+++L M KD + Y + LC+ AI+ ++++ + D
Sbjct: 394 FSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLD 453
Query: 538 EKIYDALIKAVADSGMVKEANDLHQRLI 565
+ A+I ++ + G A L +R I
Sbjct: 454 AHFHSAIIDSLIELGKYNTAVHLFKRCI 481
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 94/214 (43%), Gaps = 5/214 (2%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D +T IL +LC G+ R+ + + +N KIG K++
Sbjct: 351 DQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFS---KIGYNSYALKVL 407
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
+IM D T + + LC+ G ++A+ + + + DA ++ II + +
Sbjct: 408 SIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIEL 467
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
G +N AV +K + + P +++YTV I+ + R A + DM G YP+ TY
Sbjct: 468 GKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTY 527
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQ--PNA 328
+++S K+ E+ ++ + G++ PN
Sbjct: 528 RTIISGLCKEKETEKVRKILRECIQEGVELDPNT 561
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 88/214 (41%), Gaps = 7/214 (3%)
Query: 347 VDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLS 406
+D ++E + + + ++L + + D+AI +Y+ M S P+ N ++
Sbjct: 92 IDRIIERLKISGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMD 151
Query: 407 GLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMG---SMESAKELYSEMIGKG 463
K V+ +++ + N +++IA+ G + K + MIG+G
Sbjct: 152 VNFKLNVVNGALEIFEGIRFRN----FFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEG 207
Query: 464 IVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAI 523
P+ + C + EA +++ M + + ++ G + + A+
Sbjct: 208 FYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAV 267
Query: 524 QALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
+ M++ C P+ Y +LIK D GMV EA
Sbjct: 268 DLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEA 301
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 170/373 (45%), Gaps = 18/373 (4%)
Query: 88 WGLESFERRESGELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARK 147
WGL R+ + EL++P FV +++ + + A +++ M +
Sbjct: 151 WGLIEEMRKTNPELIEP------ELFV--------VLMRRFASANMVKKAVEVLDEMPKY 196
Query: 148 SQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSA 207
P L+ L K G + + K+ M P++ ++ G C+ G L A
Sbjct: 197 GLEPDEYVFGCLLDALCKNGSVKEASKVFEDM-REKFPPNLRYFTSLLYGWCREGKLMEA 255
Query: 208 VDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIEL 267
+++ M +G PD + + ++ G G +A D ++G P + YTVLI+
Sbjct: 256 KEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQA 315
Query: 268 VCRYCGAI-RALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQP 326
+CR + A+ V +M GC DI+TY +L+S K G+ ++ Y V+ ++ +G+ P
Sbjct: 316 LCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMP 375
Query: 327 NAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLY 386
+ VTY ++ + ++ +++E M P + YN+++ CK G + A+ L+
Sbjct: 376 SQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLW 435
Query: 387 STMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLT--GTNCSPGLVTYNIAIDGLA 444
+ M + P + T+ +++G +GF+ E + G +P T ++ L
Sbjct: 436 NEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLV 495
Query: 445 RMGSMESAKELYS 457
R +E AK+++S
Sbjct: 496 RDDKLEMAKDVWS 508
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 144/322 (44%), Gaps = 6/322 (1%)
Query: 248 DQLRKGCPPYLITYTVLIELVCRYCGA---IRALEVLEDMAMEGCYPDIITYNSLVSFTA 304
+++RK P LI + + L+ R+ A +A+EVL++M G PD + L+
Sbjct: 155 EEMRKTNPE-LIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALC 213
Query: 305 KQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRV 364
K G +E V ++ + PN + +L++ G +VL M E P V
Sbjct: 214 KNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIV 272
Query: 365 TYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCK-EGFVDEGIQLLYL 423
+ +L+G +G + A L + M P++ Y L+ LC+ E +DE +++
Sbjct: 273 VFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVE 332
Query: 424 LTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQ 483
+ C +VTY I G + G ++ + +M KG++P ++T+ + +Q
Sbjct: 333 MERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQ 392
Query: 484 LEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDA 543
EE +EL+++M ++ Y VI CK +V A++ + M + P +
Sbjct: 393 FEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVI 452
Query: 544 LIKAVADSGMVKEANDLHQRLI 565
+I G + EA + + ++
Sbjct: 453 MINGFTSQGFLIEACNHFKEMV 474
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 121/279 (43%), Gaps = 8/279 (2%)
Query: 287 EGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDG 346
E C ++ + + F A G+ EE L+ +P + L+ +S
Sbjct: 132 EVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELI----EPE--LFVVLMRRFASANMVKK 185
Query: 347 VDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLS 406
+VL+ M + P + +L+ LCK+G + A ++ M E P++ + +LL
Sbjct: 186 AVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM-REKFPPNLRYFTSLLY 244
Query: 407 GLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVP 466
G C+EG + E ++L + P +V + + G A G M A +L ++M +G P
Sbjct: 245 GWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEP 304
Query: 467 DEITHSSLAWGFCGVDQ-LEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQA 525
+ ++ L C ++ ++EAM + EM + + Y +I G CK +D
Sbjct: 305 NVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSV 364
Query: 526 LDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
LD M + P + Y ++ A +E +L +++
Sbjct: 365 LDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKM 403
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 153/329 (46%), Gaps = 2/329 (0%)
Query: 146 RKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLK 205
RK ++ + + ++R + ++D+ N+M P+++ N ++ LCK ++
Sbjct: 161 RKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVR 220
Query: 206 SAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLI 265
A ++ E+M +PD+ TY+ ++ G + N +A +++ + GC P ++TY++++
Sbjct: 221 KAQEVFENMR-DRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMV 279
Query: 266 ELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQ 325
+++C+ AL ++ M C P Y+ LV + EE + GM+
Sbjct: 280 DILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMK 339
Query: 326 PNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISL 385
+ +N+LI + V VL+ M P + NI+L L + G D A +
Sbjct: 340 ADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDV 399
Query: 386 YSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLAR 445
+ M+ + C PD TY ++ C++ ++ ++ + P + T+++ I+GL
Sbjct: 400 FRKMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCE 458
Query: 446 MGSMESAKELYSEMIGKGIVPDEITHSSL 474
+ + A L EMI GI P +T L
Sbjct: 459 ERTTQKACVLLEEMIEMGIRPSGVTFGRL 487
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 127/273 (46%), Gaps = 11/273 (4%)
Query: 302 FTAKQGVYEETYLVISNLLSR-GMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSP 360
+ Q V E Y N++ + + PN V +N L+ +L +V E M + +P
Sbjct: 178 YARAQKVDEAIYAF--NVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTP 235
Query: 361 PTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQL 420
++ TY+I+L G K L +A ++ M+ C PDIVTY+ ++ LCK G VDE + +
Sbjct: 236 DSK-TYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGI 294
Query: 421 LYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCG 480
+ + + C P Y++ + +E A + + EM G+ D +SL FC
Sbjct: 295 VRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCK 354
Query: 481 VDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKI 540
++++ +LKEM K + ++ L ++ + D A M++ C+PD
Sbjct: 355 ANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADT 413
Query: 541 YDALIKAVADSGMVKEANDLHQRLIEWKILKTE 573
Y +IK + ++ A+ + WK ++ +
Sbjct: 414 YTMVIKMFCEKKEMETADKV------WKYMRKK 440
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 138/312 (44%), Gaps = 2/312 (0%)
Query: 225 TYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDM 284
T+ ++R +EA+ + + PP L+ + L+ +C+ +A EV E+M
Sbjct: 170 TFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM 229
Query: 285 AMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYW 344
+ PD TY+ L+ K+ + V ++ G P+ VTY+ ++ L G
Sbjct: 230 R-DRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRV 288
Query: 345 DGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTL 404
D ++ M+ + PT Y+++++ L+ A+ + M D+ +N+L
Sbjct: 289 DEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSL 348
Query: 405 LSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGI 464
+ CK + ++L + +P + NI + L G + A +++ +MI K
Sbjct: 349 IGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI-KVC 407
Query: 465 VPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQ 524
PD T++ + FC ++E A ++ K M KK + +I GLC++R A
Sbjct: 408 EPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACV 467
Query: 525 ALDLMVRSRCKP 536
L+ M+ +P
Sbjct: 468 LLEEMIEMGIRP 479
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 95/178 (53%), Gaps = 5/178 (2%)
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN 238
M SG DV N +IG CK +K+ ++++M G +P++ + N I+R + ++G
Sbjct: 333 MERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGE 392
Query: 239 FNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNS 298
+EA ++ + K C P TYT++I++ C A +V + M +G +P + T++
Sbjct: 393 KDEAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSV 451
Query: 299 LVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
L++ ++ ++ +++ ++ G++P+ VT+ L L + +DVL+ +NE
Sbjct: 452 LINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIK----EEREDVLKFLNE 505
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 169/377 (44%), Gaps = 50/377 (13%)
Query: 88 WGLESFERRESGELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARK 147
WGL R+E+ +L++P V ++Q + + A +++ M +
Sbjct: 167 WGLIEEMRKENPQLIEPELFVV--------------LVQRFASADMVKKAIEVLDEMPKF 212
Query: 148 SQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSA 207
P L+ L K G + K+ M M V ++ ++ G C+ G + A
Sbjct: 213 GFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPV-NLRYFTSLLYGWCRVGKMMEA 271
Query: 208 VDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIEL 267
++ M+ +G PD + Y ++ G + G +A +D R+G P YTVLI+
Sbjct: 272 KYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQA 331
Query: 268 VCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPN 327
+C+ A++V +M C D++TY +LVS K G ++ Y+V+ +++ +G+ P+
Sbjct: 332 LCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPS 391
Query: 328 AVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYS 387
+TY +H + +H + ++ LE+M + ++ Y+
Sbjct: 392 ELTY---MHIMVAHEKKESFEECLELMEKMR----QIEYH-------------------- 424
Query: 388 TMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMG 447
PDI YN ++ CK G V E ++L + SPG+ T+ I I+GLA G
Sbjct: 425 --------PDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQG 476
Query: 448 SMESAKELYSEMIGKGI 464
+ A + + EM+ +G+
Sbjct: 477 CLLEASDHFKEMVTRGL 493
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 143/321 (44%), Gaps = 5/321 (1%)
Query: 248 DQLRKGCPPYLITYTVLIELVCRYCGA---IRALEVLEDMAMEGCYPDIITYNSLVSFTA 304
+++RK P LI + + LV R+ A +A+EVL++M G PD + L+
Sbjct: 171 EEMRKENPQ-LIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALC 229
Query: 305 KQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRV 364
K G ++ + ++ R N + +L++ G VL MNE P V
Sbjct: 230 KHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIV 288
Query: 365 TYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLL 424
Y +L+G +G + A L M P+ Y L+ LCK ++E +++ +
Sbjct: 289 DYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEM 348
Query: 425 TGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQL 484
C +VTY + G + G ++ + +MI KG++P E+T+ + +
Sbjct: 349 ERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESF 408
Query: 485 EEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDAL 544
EE +EL+++M + + Y VI CK +V A++ + M + P + +
Sbjct: 409 EECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIM 468
Query: 545 IKAVADSGMVKEANDLHQRLI 565
I +A G + EA+D + ++
Sbjct: 469 INGLASQGCLLEASDHFKEMV 489
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 142/337 (42%), Gaps = 11/337 (3%)
Query: 235 DKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVC--RYCGAIRALEVLEDMAMEGCYPD 292
D GN W + + C + Y +++++ R GA+ L +E+M E P
Sbjct: 125 DAGNLGYRFFVWAAKQPRYCHS-IEVYKSMVKILSKMRQFGAVWGL--IEEMRKEN--PQ 179
Query: 293 IIT---YNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDD 349
+I + LV A + ++ V+ + G +P+ + L+ +L HG
Sbjct: 180 LIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAK 239
Query: 350 VLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLC 409
+ E M P + +L G C+ G + A + M PDIV Y LLSG
Sbjct: 240 LFEDMR-MRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYA 298
Query: 410 KEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEI 469
G + + LL + P Y + I L ++ ME A +++ EM D +
Sbjct: 299 NAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVV 358
Query: 470 THSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLM 529
T+++L GFC ++++ +L +M KK Y +++ K+ + ++ ++ M
Sbjct: 359 TYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKM 418
Query: 530 VRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
+ PD IY+ +I+ G VKEA L + E
Sbjct: 419 RQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEE 455
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 188/444 (42%), Gaps = 17/444 (3%)
Query: 61 LAQRRLQCRSFQGSAVIDRVNEVDHEDWGLESFERRESGELVDPGKPVKPPPFVRNDGFT 120
LA R+ + + D +E D + W E +G V + K + G
Sbjct: 53 LAPRKFLQKRRKMEVFKDAADETDQKRWRGLMLEIESTGSAVPVLRQYKTDG---DQGLP 109
Query: 121 NNKILQNLCTRGRLMAAARLIEIMA--RKSQIPHFPSCT--NLIRGLIKIGQIDKGCKII 176
+ +L L +L + EI+ R +F LI K+G + +++
Sbjct: 110 RDLVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVL 169
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
+++ G P+VI+ ++ + G +A + M SG P AITY I++ +
Sbjct: 170 SVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEG 229
Query: 237 GNFNEAVSFWK---DQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
F EA ++ D+ + P Y ++I + + +A +V M +G
Sbjct: 230 DKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQST 289
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
+TYNSL+SF + Y+E + + +QP+ V+Y LI + + V E
Sbjct: 290 VTYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEE 346
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
M + PT YNI+L+ SG++++A +++ +M + FPD+ +Y T+LS
Sbjct: 347 MLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASD 406
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSS 473
++ + + P +VTY I G A+ +E E+Y +M GI ++ ++
Sbjct: 407 MEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTT 466
Query: 474 L--AWGFCGVDQLEEAMELLKEMH 495
+ A G C A+ KEM
Sbjct: 467 IMDASGRC--KNFGSALGWYKEME 488
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 113/271 (41%), Gaps = 35/271 (12%)
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
I + L++ K G + V+S L G PN ++Y L+ S G + + +
Sbjct: 147 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 206
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
M + P+ +TY I+L + A ++ T++ E P
Sbjct: 207 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSP----------------- 249
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSS 473
P Y++ I + G+ E A++++S M+GKG+ +T++S
Sbjct: 250 ---------------LKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNS 294
Query: 474 LAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSR 533
L +E ++ +M + D + +Y +I + R+ + A+ + M+ +
Sbjct: 295 L---MSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAG 351
Query: 534 CKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
+P K Y+ L+ A A SGMV++A + + +
Sbjct: 352 VRPTHKAYNILLDAFAISGMVEQAKTVFKSM 382
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 145/344 (42%), Gaps = 4/344 (1%)
Query: 124 ILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKI----GQIDKGCKIINIM 179
IL+NL + A + F N L+KI G+ ++++ M
Sbjct: 116 ILRNLSYDNKARCAKLAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEM 175
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
V G T N++I + G K AV P +YN I+ + +
Sbjct: 176 VQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQY 235
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
+K L G P ++TY +L+ R R + ++MA +G PD TYN L
Sbjct: 236 KLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNIL 295
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS 359
+ K ++++ G+ P+ + Y TLI LS G + L+ M +
Sbjct: 296 LHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGC 355
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQ 419
P V Y +M+ G SG LD+A ++ M + P++ TYN+++ GLC G E
Sbjct: 356 RPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACW 415
Query: 420 LLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKG 463
LL + C+P V Y+ + L + G + A+++ EM+ KG
Sbjct: 416 LLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 144/308 (46%), Gaps = 2/308 (0%)
Query: 260 TYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDII-TYNSLVSFTAKQGVYEETYLVISN 318
+Y +L+++ CG +A+ L D ++ +P T+N L+ + G+ ++ +
Sbjct: 151 SYHLLMKIFAE-CGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMK 209
Query: 319 LLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGL 378
+ +P +YN +++SL + ++ V + M E P +TYNI+L + G
Sbjct: 210 SKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGK 269
Query: 379 LDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNI 438
+DR L+ M + PD TYN LL L K + L + P ++ Y
Sbjct: 270 MDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTT 329
Query: 439 AIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKD 498
IDGL+R G++E+ K EM+ G PD + ++ + G+ +L++A E+ +EM K
Sbjct: 330 LIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKG 389
Query: 499 EKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEAN 558
+ Y +I GLC + A L M C P+ +Y L+ + +G + EA
Sbjct: 390 QLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEAR 449
Query: 559 DLHQRLIE 566
+ + +++
Sbjct: 450 KVIREMVK 457
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 134/304 (44%), Gaps = 8/304 (2%)
Query: 202 GYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITY 261
G K+ LV++M G A T+N +I + G +AV + P+ +Y
Sbjct: 163 GEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSY 222
Query: 262 TVLIELVCRYCGAIRALEVLE----DMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVIS 317
++ + ++ +++E M +G PD++TYN L+ + G + +
Sbjct: 223 NAILNSLL----GVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFD 278
Query: 318 NLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSG 377
+ G P++ TYN L+H L L M E P+ + Y +++GL ++G
Sbjct: 279 EMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAG 338
Query: 378 LLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYN 437
L+ MV C PD+V Y +++G G +D+ ++ +T P + TYN
Sbjct: 339 NLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYN 398
Query: 438 IAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKK 497
I GL G A L EM +G P+ + +S+L +L EA ++++EM KK
Sbjct: 399 SMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKK 458
Query: 498 DEKI 501
+
Sbjct: 459 GHYV 462
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 135/290 (46%), Gaps = 9/290 (3%)
Query: 117 DGFTNNKILQNL--CTRGRL-MAAARLIEIMARKS--QIPHFPSCTNLIRGLIKIGQIDK 171
DGF NL C+ G +A +++ M K+ P S ++ L+ + Q
Sbjct: 178 DGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKL 237
Query: 172 GCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIR 231
+ M+ G PDV+T N+++ + G + L ++M+ G SPD+ TYN ++
Sbjct: 238 IEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLH 297
Query: 232 GMFDKGNFNEAVSFWKDQLRK-GCPPYLITYTVLIELVCRYCGAIRALE-VLEDMAMEGC 289
+ KGN A + +++ G P ++ YT LI+ + R G + A + L++M GC
Sbjct: 298 -ILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSR-AGNLEACKYFLDEMVKAGC 355
Query: 290 YPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDD 349
PD++ Y +++ G ++ + + +G PN TYN++I L G +
Sbjct: 356 RPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACW 415
Query: 350 VLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIV 399
+L+ M P V Y+ +++ L K+G L A + MV + + +V
Sbjct: 416 LLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLV 465
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 181/402 (45%), Gaps = 13/402 (3%)
Query: 124 ILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSG 183
+++ GRL A L + + + + S L++ ++K +++ C I
Sbjct: 87 VIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGW 146
Query: 184 GVPDVITC-NMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEA 242
V IT N+++ LC+ A + ++M+ GC PD +Y +++G +G EA
Sbjct: 147 EVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEA 206
Query: 243 VS-----FWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYN 297
FW+ +KG ++ Y +L++ +C A+E+L + +G Y+
Sbjct: 207 THLLYSMFWRIS-QKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYH 265
Query: 298 SLVS---FTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIM 354
+ + ++ +G+ E +++ L RG P +Y+ + L G ++VL M
Sbjct: 266 HIEAGHWESSSEGI-ERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAM 324
Query: 355 NETSSPPTRVTYNIMLNGLCKSGLLDRAISLYST-MVSESCFPDIVTYNTLLSGLCKEGF 413
PT Y + LC++G L A+S+ + M+ C P + YN L+ GLC +G
Sbjct: 325 RSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGK 384
Query: 414 VDEGIQLLYLLTG-TNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHS 472
E + L ++ +C TY +DGL R G A ++ EM+ K P T+
Sbjct: 385 SMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYH 444
Query: 473 SLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLC 514
+ G C +D+ EA+ L+EM +D + + ++ + +C
Sbjct: 445 MMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 164/381 (43%), Gaps = 11/381 (2%)
Query: 116 NDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLI-RGLIKIGQIDKGCK 174
N + + +LQ + L AA + ++ + NL+ + L ++ + D +
Sbjct: 114 NWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQ 173
Query: 175 IINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDM----SLSGCSPDAITYNTII 230
+ M G PD + +++ G C G L+ A L+ M S G D + Y ++
Sbjct: 174 VFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILL 233
Query: 231 RGMFDKGNFNEAVSFWKDQLRKG--CPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEG 288
+ D G ++A+ LRKG P + G R +L + + G
Sbjct: 234 DALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRG 293
Query: 289 CYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYW-DGV 347
P + +Y+++ + ++G E V+ + S+G +P Y + +L G + V
Sbjct: 294 AIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAV 353
Query: 348 DDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSE-SCFPDIVTYNTLLS 406
+ + M + PT YN+++ GLC G A+ M + SC + TY TL+
Sbjct: 354 SVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVD 413
Query: 407 GLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVP 466
GLC++G E Q++ + + PG+ TY++ I GL M A EM+ + +VP
Sbjct: 414 GLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVP 473
Query: 467 DEITHSSLAWG--FCGVDQLE 485
+ +LA FC +D +E
Sbjct: 474 ESSVWKALAESVCFCAIDVVE 494
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 164/419 (39%), Gaps = 81/419 (19%)
Query: 210 LVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVL----- 264
++E M C + ++IR G +A+S +K C + +++ L
Sbjct: 68 VIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMV 127
Query: 265 ----IELVC----RYC------GAIRAL-----------------EVLEDMAMEGCYPDI 293
+E C +YC I AL +V ++M +GCYPD
Sbjct: 128 KESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDR 187
Query: 294 ITYNSLVSFTAKQGVYEE-TYLVIS---NLLSRGMQPNAVTYNTLIHSLS---------- 339
+Y L+ +G EE T+L+ S + +G + V Y L+ +L
Sbjct: 188 DSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIE 247
Query: 340 --------------------SHGYW----DGVDDVLEIMNET---SSPPTRVTYNIMLNG 372
G+W +G++ V ++ ET + P +Y+ M
Sbjct: 248 ILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATD 307
Query: 373 LCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLL--YLLTGTNCS 430
L + G L + M S+ P Y + LC+ G + E + ++ ++ G +C
Sbjct: 308 LFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQG-HCL 366
Query: 431 PGLVTYNIAIDGLARMG-SMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAME 489
P + YN+ I GL G SME+ L V +E T+ +L G C Q EA +
Sbjct: 367 PTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQ 426
Query: 490 LLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAV 548
+++EM K Y +I GLC + A+ L+ MV P+ ++ AL ++V
Sbjct: 427 VMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESV 485
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 136/341 (39%), Gaps = 43/341 (12%)
Query: 260 TYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNL 319
Y +I+++ + + V+E M + C + S++ ++ G E+ + +L
Sbjct: 48 VYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSL 107
Query: 320 LSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVT-YNIMLNGLCKSGL 378
+++++TL+ + + + +R+T N+++ LC+
Sbjct: 108 HEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNR 167
Query: 379 LDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPG----LV 434
D A ++ M + C+PD +Y L+ G C EG ++E LLY + G +V
Sbjct: 168 SDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIV 227
Query: 435 TYNIAIDGLARMGSMESA-------------------------------------KELYS 457
Y I +D L G ++ A K L +
Sbjct: 228 VYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLT 287
Query: 458 EMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQR 517
E + +G +P ++S++A +L E E+L M K + Y + LC+
Sbjct: 288 ETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAG 347
Query: 518 KVDIAIQALDL-MVRSRCKPDEKIYDALIKAVADSGMVKEA 557
K+ A+ ++ M++ C P +Y+ LIK + D G EA
Sbjct: 348 KLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEA 388
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 5/220 (2%)
Query: 327 NAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLY 386
N Y T+I L + V+E M E S + ++ ++G L+ AISL+
Sbjct: 45 NGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLF 104
Query: 387 STMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLY-LLTGTNCSPGLVTYNIAIDGLAR 445
++ +C ++++TLL + KE ++ + G + + N+ + L +
Sbjct: 105 KSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQ 164
Query: 446 MGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMH----KKDEKI 501
+ + A +++ EM +G PD ++ L GFC +LEEA LL M +K
Sbjct: 165 VNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGE 224
Query: 502 KHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIY 541
YR ++ LC +VD AI+ L ++R K ++ Y
Sbjct: 225 DIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCY 264
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 181/402 (45%), Gaps = 13/402 (3%)
Query: 124 ILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSG 183
+++ GRL A L + + + + S L++ ++K +++ C I
Sbjct: 87 VIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGW 146
Query: 184 GVPDVITC-NMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEA 242
V IT N+++ LC+ A + ++M+ GC PD +Y +++G +G EA
Sbjct: 147 EVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEA 206
Query: 243 VS-----FWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYN 297
FW+ +KG ++ Y +L++ +C A+E+L + +G Y+
Sbjct: 207 THLLYSMFWRIS-QKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYH 265
Query: 298 SLVS---FTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIM 354
+ + ++ +G+ E +++ L RG P +Y+ + L G ++VL M
Sbjct: 266 HIEAGHWESSSEGI-ERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAM 324
Query: 355 NETSSPPTRVTYNIMLNGLCKSGLLDRAISLYST-MVSESCFPDIVTYNTLLSGLCKEGF 413
PT Y + LC++G L A+S+ + M+ C P + YN L+ GLC +G
Sbjct: 325 RSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGK 384
Query: 414 VDEGIQLLYLLTG-TNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHS 472
E + L ++ +C TY +DGL R G A ++ EM+ K P T+
Sbjct: 385 SMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYH 444
Query: 473 SLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLC 514
+ G C +D+ EA+ L+EM +D + + ++ + +C
Sbjct: 445 MMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 164/381 (43%), Gaps = 11/381 (2%)
Query: 116 NDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLI-RGLIKIGQIDKGCK 174
N + + +LQ + L AA + ++ + NL+ + L ++ + D +
Sbjct: 114 NWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQ 173
Query: 175 IINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDM----SLSGCSPDAITYNTII 230
+ M G PD + +++ G C G L+ A L+ M S G D + Y ++
Sbjct: 174 VFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILL 233
Query: 231 RGMFDKGNFNEAVSFWKDQLRKG--CPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEG 288
+ D G ++A+ LRKG P + G R +L + + G
Sbjct: 234 DALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRG 293
Query: 289 CYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYW-DGV 347
P + +Y+++ + ++G E V+ + S+G +P Y + +L G + V
Sbjct: 294 AIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAV 353
Query: 348 DDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSE-SCFPDIVTYNTLLS 406
+ + M + PT YN+++ GLC G A+ M + SC + TY TL+
Sbjct: 354 SVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVD 413
Query: 407 GLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVP 466
GLC++G E Q++ + + PG+ TY++ I GL M A EM+ + +VP
Sbjct: 414 GLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVP 473
Query: 467 DEITHSSLAWG--FCGVDQLE 485
+ +LA FC +D +E
Sbjct: 474 ESSVWKALAESVCFCAIDVVE 494
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 164/419 (39%), Gaps = 81/419 (19%)
Query: 210 LVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVL----- 264
++E M C + ++IR G +A+S +K C + +++ L
Sbjct: 68 VIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMV 127
Query: 265 ----IELVC----RYC------GAIRAL-----------------EVLEDMAMEGCYPDI 293
+E C +YC I AL +V ++M +GCYPD
Sbjct: 128 KESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDR 187
Query: 294 ITYNSLVSFTAKQGVYEE-TYLVIS---NLLSRGMQPNAVTYNTLIHSLS---------- 339
+Y L+ +G EE T+L+ S + +G + V Y L+ +L
Sbjct: 188 DSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIE 247
Query: 340 --------------------SHGYW----DGVDDVLEIMNET---SSPPTRVTYNIMLNG 372
G+W +G++ V ++ ET + P +Y+ M
Sbjct: 248 ILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATD 307
Query: 373 LCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLL--YLLTGTNCS 430
L + G L + M S+ P Y + LC+ G + E + ++ ++ G +C
Sbjct: 308 LFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQG-HCL 366
Query: 431 PGLVTYNIAIDGLARMG-SMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAME 489
P + YN+ I GL G SME+ L V +E T+ +L G C Q EA +
Sbjct: 367 PTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQ 426
Query: 490 LLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAV 548
+++EM K Y +I GLC + A+ L+ MV P+ ++ AL ++V
Sbjct: 427 VMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESV 485
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 136/341 (39%), Gaps = 43/341 (12%)
Query: 260 TYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNL 319
Y +I+++ + + V+E M + C + S++ ++ G E+ + +L
Sbjct: 48 VYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSL 107
Query: 320 LSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVT-YNIMLNGLCKSGL 378
+++++TL+ + + + +R+T N+++ LC+
Sbjct: 108 HEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNR 167
Query: 379 LDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPG----LV 434
D A ++ M + C+PD +Y L+ G C EG ++E LLY + G +V
Sbjct: 168 SDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIV 227
Query: 435 TYNIAIDGLARMGSMESA-------------------------------------KELYS 457
Y I +D L G ++ A K L +
Sbjct: 228 VYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLT 287
Query: 458 EMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQR 517
E + +G +P ++S++A +L E E+L M K + Y + LC+
Sbjct: 288 ETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAG 347
Query: 518 KVDIAIQALDL-MVRSRCKPDEKIYDALIKAVADSGMVKEA 557
K+ A+ ++ M++ C P +Y+ LIK + D G EA
Sbjct: 348 KLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEA 388
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 5/220 (2%)
Query: 327 NAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLY 386
N Y T+I L + V+E M E S + ++ ++G L+ AISL+
Sbjct: 45 NGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLF 104
Query: 387 STMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLY-LLTGTNCSPGLVTYNIAIDGLAR 445
++ +C ++++TLL + KE ++ + G + + N+ + L +
Sbjct: 105 KSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQ 164
Query: 446 MGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMH----KKDEKI 501
+ + A +++ EM +G PD ++ L GFC +LEEA LL M +K
Sbjct: 165 VNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGE 224
Query: 502 KHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIY 541
YR ++ LC +VD AI+ L ++R K ++ Y
Sbjct: 225 DIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCY 264
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 127/277 (45%), Gaps = 1/277 (0%)
Query: 221 PDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEV 280
PDA TYN +I G G F++A+ + + ++K P +T+ LI +C+ AL++
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 281 LEDM-AMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLS 339
DM + G P + Y SL+ + G + + ++ +A Y+TLI SL
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLI 269
Query: 340 SHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIV 399
G + V +LE M+E P VTYN+++NG C + A + MV + PD++
Sbjct: 270 KAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVI 329
Query: 400 TYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEM 459
+YN +L + +E L + CSP ++Y I DGL E A + EM
Sbjct: 330 SYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEM 389
Query: 460 IGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHK 496
+ KG P C +LE +++ +H+
Sbjct: 390 LFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLHR 426
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 132/285 (46%), Gaps = 7/285 (2%)
Query: 272 CGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTY 331
CG + ++ E PD TYN L+ ++ G +++ + ++ + ++P VT+
Sbjct: 131 CGELEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTF 190
Query: 332 NTLIHSLSSHGYWDGVDDVLEIMNET----SSPPTRVTYNIMLNGLCKSGLLDRAISLYS 387
TLIH L V + L++ ++ PT Y ++ LC+ G L A L
Sbjct: 191 GTLIHGLCKDSR---VKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKD 247
Query: 388 TMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMG 447
D Y+TL+S L K G +E +L ++ C P VTYN+ I+G
Sbjct: 248 EAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVEN 307
Query: 448 SMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYR 507
ESA + EM+ KG+ PD I+++ + F + + EEA L ++M ++ +YR
Sbjct: 308 DSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYR 367
Query: 508 CVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSG 552
V GLC+ + + A LD M+ KP + ++ + +SG
Sbjct: 368 IVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESG 412
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 137/310 (44%), Gaps = 2/310 (0%)
Query: 113 FVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKG 172
F + D T N ++ G A +L + M +K P + LI GL K ++ +
Sbjct: 147 FGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEA 206
Query: 173 CKIINIMVMSGGV-PDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIR 231
K+ + M+ GV P V +I LC+ G L A L ++ DA Y+T+I
Sbjct: 207 LKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLIS 266
Query: 232 GMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYP 291
+ G NE ++ KGC P +TY VLI C + A VL++M +G P
Sbjct: 267 SLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKP 326
Query: 292 DIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVL 351
D+I+YN ++ + +EE + ++ RG P+ ++Y + L ++ +L
Sbjct: 327 DVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVIL 386
Query: 352 EIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKE 411
+ M P R L LC+SG L+ + S++ D ++ ++ +CKE
Sbjct: 387 DEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSL-HRGIAGDADVWSVMIPTMCKE 445
Query: 412 GFVDEGIQLL 421
+ + I LL
Sbjct: 446 PVISDSIDLL 455
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 116/290 (40%), Gaps = 37/290 (12%)
Query: 322 RGMQPNAVTYNTLIHSLSSHGYWDGVDDVL-EIMNETSSPPTRVTYNIMLNGLCKSGLLD 380
R + + + Y+ +I L +D +D VL + +T PT + + ++N + L
Sbjct: 41 RPFRYSLLCYDIIITKLGGSKMFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPS 100
Query: 381 RAISLYSTMVSESC----------------------------------FPDIVTYNTLLS 406
RA+ ++ M C PD TYN L+
Sbjct: 101 RALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFGKPDACTYNILIH 160
Query: 407 GLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIG-KGIV 465
G + G D+ ++L + P VT+ I GL + ++ A ++ +M+ G+
Sbjct: 161 GCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVR 220
Query: 466 PDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQA 525
P ++SL C + +L A +L E ++ K+ Y +I L K + +
Sbjct: 221 PTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMI 280
Query: 526 LDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKILKTEII 575
L+ M CKPD Y+ LI + AN + ++E K LK ++I
Sbjct: 281 LEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVE-KGLKPDVI 329
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 168/385 (43%), Gaps = 18/385 (4%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC-KIINIMV 180
N + L R A + E M + + P +C LI L K G+ K +I M
Sbjct: 277 NAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMS 336
Query: 181 MSGGVPDVITCNMVIGGL----CKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
G V V GGL C G + A+ + +M G + I YNT++ ++K
Sbjct: 337 EKG----VKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDA-YNK 391
Query: 237 GNFNEAVSFWKDQLR-KGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIIT 295
N E V ++R KG P TY +L++ R +L +M G P++ +
Sbjct: 392 SNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKS 451
Query: 296 YNSLVSFTAK----QGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVL 351
Y L+S + + + +L + + G++P++ +Y LIH+ S G+ +
Sbjct: 452 YTCLISAYGRTKKMSDMAADAFLRMKKV---GLKPSSHSYTALIHAYSVSGWHEKAYASF 508
Query: 352 EIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKE 411
E M + P+ TY +L+ +SG + + ++ M+ E +TYNTLL G K+
Sbjct: 509 EEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQ 568
Query: 412 GFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITH 471
G E ++ + P ++TYN+ ++ AR G +L EM + PD IT+
Sbjct: 569 GLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITY 628
Query: 472 SSLAWGFCGVDQLEEAMELLKEMHK 496
S++ + F V + A K M K
Sbjct: 629 STMIYAFVRVRDFKRAFFYHKMMVK 653
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 169/403 (41%), Gaps = 4/403 (0%)
Query: 160 IRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGY-LKSAVDLVEDMSLSG 218
I GL + D ++ M PD +TC ++I L K G K ++ E MS G
Sbjct: 280 ISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKG 339
Query: 219 CSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRAL 278
+ +++ D+G EA+ + +KG I Y L++ + I +
Sbjct: 340 VKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNK-SNHIEEV 398
Query: 279 E-VLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHS 337
E + +M +G P TYN L+ A++ + ++ + G++PN +Y LI +
Sbjct: 399 EGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISA 458
Query: 338 L-SSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFP 396
+ D D M + P+ +Y +++ SG ++A + + M E P
Sbjct: 459 YGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKP 518
Query: 397 DIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELY 456
+ TY ++L + G + +++ L+ +TYN +DG A+ G A+++
Sbjct: 519 SVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVV 578
Query: 457 SEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQ 516
SE G+ P +T++ L + Q + +LLKEM + K Y +I +
Sbjct: 579 SEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRV 638
Query: 517 RKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEAND 559
R A +MV+S PD + Y+ L + D K D
Sbjct: 639 RDFKRAFFYHKMMVKSGQVPDPRSYEKLRAILEDKAKTKNRKD 681
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 115/261 (44%), Gaps = 2/261 (0%)
Query: 299 LVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETS 358
L + ++ + + L++SNL + + YN I LS+ +D +V E M++ +
Sbjct: 244 LFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKIN 303
Query: 359 SPPTRVTYNIMLNGLCKSGLLDRAI-SLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEG 417
P VT I++ L K+G + + ++ M + + L+ C EG +E
Sbjct: 304 VYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEA 363
Query: 418 IQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWG 477
+ + + + YN +D + +E + L++EM KG+ P T++ L
Sbjct: 364 LVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDA 423
Query: 478 FCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKV-DIAIQALDLMVRSRCKP 536
+ Q + LL+EM + +Y C+I + +K+ D+A A M + KP
Sbjct: 424 YARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKP 483
Query: 537 DEKIYDALIKAVADSGMVKEA 557
Y ALI A + SG ++A
Sbjct: 484 SSHSYTALIHAYSVSGWHEKA 504
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 130/342 (38%), Gaps = 39/342 (11%)
Query: 222 DAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCG--AIRALE 279
D YN I G+ +++A ++ + P +T +LI R G A E
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILI-TTLRKAGRSAKEVWE 330
Query: 280 VLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLS 339
+ E M+ +G + LV +G+ EE ++ + + +G++ N + YNTL+ + +
Sbjct: 331 IFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYN 390
Query: 340 SHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIV 399
+ + V+ + M + P+ TYNI+++ + D +L M P++
Sbjct: 391 KSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVK 450
Query: 400 TYNTLLSGLCK-EGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSE 458
+Y L+S + + D + P +Y I + G E A + E
Sbjct: 451 SYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEE 510
Query: 459 MIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRK 518
M +GI P T++S+ F + ME+ K
Sbjct: 511 MCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWK-------------------------- 544
Query: 519 VDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDL 560
LM+R + K Y+ L+ A G+ EA D+
Sbjct: 545 ---------LMLREKIKGTRITYNTLLDGFAKQGLYIEARDV 577
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 134/315 (42%), Gaps = 2/315 (0%)
Query: 262 TVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLS 321
+VL L+ R A L +L ++ + + D+ YN+ +S + Y++ + V +
Sbjct: 242 SVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDK 301
Query: 322 RGMQPNAVTYNTLIHSLSSHGY-WDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLD 380
+ P+ VT LI +L G V ++ E M+E ++ + ++ C GL +
Sbjct: 302 INVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKE 361
Query: 381 RAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAI 440
A+ + + M + + + YNTL+ K ++E L + P TYNI +
Sbjct: 362 EALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILM 421
Query: 441 DGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEE-AMELLKEMHKKDE 499
D AR + + L EM G+ P+ +++ L + ++ + A + M K
Sbjct: 422 DAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGL 481
Query: 500 KIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEAND 559
K +Y +I + A + + M + KP + Y +++ A SG + +
Sbjct: 482 KPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLME 541
Query: 560 LHQRLIEWKILKTEI 574
+ + ++ KI T I
Sbjct: 542 IWKLMLREKIKGTRI 556
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 76/184 (41%)
Query: 151 PHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDL 210
P S T LI G +K M G P V T V+ + G +++
Sbjct: 483 PSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEI 542
Query: 211 VEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCR 270
+ M ITYNT++ G +G + EA + + G P ++TY +L+ R
Sbjct: 543 WKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYAR 602
Query: 271 YCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVT 330
+ ++L++MA PD ITY++++ + ++ + ++ G P+ +
Sbjct: 603 GGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRS 662
Query: 331 YNTL 334
Y L
Sbjct: 663 YEKL 666
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 63/159 (39%)
Query: 141 IEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCK 200
E M ++ P + T+++ + G K +I +M+ IT N ++ G K
Sbjct: 508 FEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAK 567
Query: 201 RGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLIT 260
+G A D+V + S G P +TYN ++ G + K+ P IT
Sbjct: 568 QGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSIT 627
Query: 261 YTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
Y+ +I R RA + M G PD +Y L
Sbjct: 628 YSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 137/315 (43%), Gaps = 2/315 (0%)
Query: 160 IRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGC 219
++ L + G +++ ++ N++ G V+TCN V+ G K L +L ++M S
Sbjct: 152 VKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEF 211
Query: 220 SPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALE 279
+ I +IR + D G+ +E K L++G P Y LI C E
Sbjct: 212 DSERI--RCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSE 269
Query: 280 VLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLS 339
VL M +P + Y ++ E Y + NL +G P+ V Y T+I
Sbjct: 270 VLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFC 329
Query: 340 SHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIV 399
G+ + M + P YN+M++G K G + + Y+ M+ ++
Sbjct: 330 EKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTML 389
Query: 400 TYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEM 459
+ NT++ G C G DE ++ ++ T +P +TYN I G + +E +LY E+
Sbjct: 390 SCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKEL 449
Query: 460 IGKGIVPDEITHSSL 474
G+ P + +++L
Sbjct: 450 KALGLKPSGMAYAAL 464
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 159/380 (41%), Gaps = 11/380 (2%)
Query: 185 VPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVS 244
P ++ N++ G L +K+A ++ +G P+ ++ + ++G EA+
Sbjct: 110 TPGPVSLNILFGALLDGKAVKAAKSFLDT---TGFKPEPTLLEQYVKCLSEEGLVEEAIE 166
Query: 245 FWKDQLRKGCPPYLIT-YTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIIT--YNSLVS 301
+ G ++T +VL+ C R L+ ++ E + + L+
Sbjct: 167 VYNVLKDMGISSSVVTCNSVLLG-----CLKARKLDRFWELHKEMVESEFDSERIRCLIR 221
Query: 302 FTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPP 361
G E Y ++ L +G+ P Y LI G + + +VL M + P
Sbjct: 222 ALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFP 281
Query: 362 TRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLL 421
+ Y ++ GLC + A ++ + + PD V Y T++ G C++G++ +L
Sbjct: 282 SMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLW 341
Query: 422 YLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGV 481
+ + P YN+ I G + G + + Y+EM+ G ++ +++ GFC
Sbjct: 342 FEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSH 401
Query: 482 DQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIY 541
+ +EA E+ K M + Y +I G CK+ KV+ ++ + KP Y
Sbjct: 402 GKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAY 461
Query: 542 DALIKAVADSGMVKEANDLH 561
AL++ + S V + +L
Sbjct: 462 AALVRNLKMSDSVATSLNLE 481
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 108/252 (42%), Gaps = 4/252 (1%)
Query: 159 LIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSG 218
LIR L G + +G +++ + G P +I G C+ G +++ M
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWN 278
Query: 219 CSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCR--YCGAIR 276
P Y II+G+ EA +K+ KG P + YT +I C + G+ R
Sbjct: 279 HFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSAR 338
Query: 277 ALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIH 336
L +M +G P+ YN ++ K+G + +L G ++ NT+I
Sbjct: 339 KLWF--EMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIK 396
Query: 337 SLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFP 396
SHG D ++ + M+ET P +TYN ++ G CK +++ + LY + + P
Sbjct: 397 GFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKP 456
Query: 397 DIVTYNTLLSGL 408
+ Y L+ L
Sbjct: 457 SGMAYAALVRNL 468
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 117/266 (43%), Gaps = 8/266 (3%)
Query: 124 ILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSG 183
+++ LC G + L++ ++ P LI G +IG ++++ M+
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWN 278
Query: 184 GVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAV 243
P + +I GLC A + +++ G +PD + Y T+IRG +KG A
Sbjct: 279 HFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSAR 338
Query: 244 SFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVL-EDMAMEGCYPDIITYNSLVSF 302
W + ++KG P Y V+I + G I +E +M G +++ N+++
Sbjct: 339 KLWFEMIKKGMRPNEFAYNVMIHGHFKR-GEISLVEAFYNEMLRNGYGGTMLSCNTMIKG 397
Query: 303 TAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS--- 359
G +E + + N+ G+ PNA+TYN LI + V+ L++ E +
Sbjct: 398 FCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKE---NKVEKGLKLYKELKALGL 454
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAISL 385
P+ + Y ++ L S + +++L
Sbjct: 455 KPSGMAYAALVRNLKMSDSVATSLNL 480
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 134/345 (38%), Gaps = 5/345 (1%)
Query: 220 SPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALE 279
+P ++ N + + D A SF K P L Y + AI
Sbjct: 110 TPGPVSLNILFGALLDGKAVKAAKSFLDTTGFKPEPTLLEQYVKCLSEEGLVEEAIEVYN 169
Query: 280 VLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLS 339
VL+DM G ++T NS++ K + + + ++ + LI +L
Sbjct: 170 VLKDM---GISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERI--RCLIRALC 224
Query: 340 SHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIV 399
G ++L+ + P + Y +++G C+ G + TM++ + FP +
Sbjct: 225 DGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMY 284
Query: 400 TYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEM 459
Y ++ GLC E + L +P V Y I G G + SA++L+ EM
Sbjct: 285 IYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEM 344
Query: 460 IGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKV 519
I KG+ P+E ++ + G ++ EM + + +I G C K
Sbjct: 345 IKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKS 404
Query: 520 DIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
D A + M + P+ Y+ALIK V++ L++ L
Sbjct: 405 DEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKEL 449
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 82/182 (45%)
Query: 119 FTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINI 178
+ KI++ LC + + A + + + K P T +IRG + G + K+
Sbjct: 284 YIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFE 343
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN 238
M+ G P+ N++I G KRG + +M +G ++ NT+I+G G
Sbjct: 344 MIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGK 403
Query: 239 FNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNS 298
+EA +K+ G P ITY LI+ C+ + L++ +++ G P + Y +
Sbjct: 404 SDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAA 463
Query: 299 LV 300
LV
Sbjct: 464 LV 465
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 52/120 (43%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
+R + F N ++ RG + M R SC +I+G G+ D+
Sbjct: 349 MRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAF 408
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
+I M +G P+ IT N +I G CK ++ + L +++ G P + Y ++R +
Sbjct: 409 EIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNL 468
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 122/268 (45%)
Query: 276 RALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLI 335
+A E+ + + G P+ +YN L+ Y + +L R + P+ +Y LI
Sbjct: 173 KAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILI 232
Query: 336 HSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCF 395
G +G ++L+ M P R++Y +LN LC+ L A L M + C
Sbjct: 233 QGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCN 292
Query: 396 PDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKEL 455
PD+V YNT++ G C+E + ++L + CSP V+Y I GL G + K+
Sbjct: 293 PDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKY 352
Query: 456 YSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCK 515
EMI KG P + L GFC ++EEA ++++ + K E + + VI +C
Sbjct: 353 LEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICN 412
Query: 516 QRKVDIAIQALDLMVRSRCKPDEKIYDA 543
+ + + L+ V+ D +I D
Sbjct: 413 EDESEKIKLFLEDAVKEEITGDTRIVDV 440
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 123/254 (48%), Gaps = 1/254 (0%)
Query: 122 NKILQNLCT-RGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMV 180
N+IL L + RG L A L + +P+ S L++ + ++ M+
Sbjct: 158 NRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKML 217
Query: 181 MSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFN 240
VPDV + ++I G C++G + A++L++DM G PD ++Y T++ + K
Sbjct: 218 ERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLR 277
Query: 241 EAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLV 300
EA KGC P L+ Y +I CR A+ A +VL+DM GC P+ ++Y +L+
Sbjct: 278 EAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLI 337
Query: 301 SFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSP 360
QG+++E + ++S+G P+ N L+ S G + DV+E++ +
Sbjct: 338 GGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGET 397
Query: 361 PTRVTYNIMLNGLC 374
T+ +++ +C
Sbjct: 398 LHSDTWEMVIPLIC 411
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 123/275 (44%), Gaps = 6/275 (2%)
Query: 290 YP---DIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSH-GYWD 345
YP +I TY L+ A+ + E+ +L P N ++ L SH GY
Sbjct: 115 YPLTGEIFTY--LIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQ 172
Query: 346 GVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLL 405
++ + P +YN+++ C + L A L+ M+ PD+ +Y L+
Sbjct: 173 KAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILI 232
Query: 406 SGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIV 465
G C++G V+ ++LL + P ++Y ++ L R + A +L M KG
Sbjct: 233 QGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCN 292
Query: 466 PDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQA 525
PD + ++++ GFC D+ +A ++L +M +YR +I GLC Q D +
Sbjct: 293 PDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKY 352
Query: 526 LDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDL 560
L+ M+ P + + L+K G V+EA D+
Sbjct: 353 LEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDV 387
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%)
Query: 167 GQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITY 226
G + K ++ + G +P+ + N+++ C L A L M PD +Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 227 NTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAM 286
+I+G KG N A+ D L KG P ++YT L+ +CR A ++L M +
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKL 288
Query: 287 EGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDG 346
+GC PD++ YN+++ ++ + V+ ++LS G PN+V+Y TLI L G +D
Sbjct: 289 KGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDE 348
Query: 347 VDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRA 382
LE M P N ++ G C G ++ A
Sbjct: 349 GKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEA 384
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 107/252 (42%), Gaps = 1/252 (0%)
Query: 315 VISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLC 374
V++ S G + LI + + V M E + P N +L+ L
Sbjct: 106 VLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLV 165
Query: 375 KS-GLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGL 433
G L +A L+ + P+ +YN L+ C + QL + + P +
Sbjct: 166 SHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDV 225
Query: 434 VTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKE 493
+Y I I G R G + A EL +M+ KG VPD +++++L C QL EA +LL
Sbjct: 226 DSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCR 285
Query: 494 MHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGM 553
M K Y +ILG C++ + A + LD M+ + C P+ Y LI + D GM
Sbjct: 286 MKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGM 345
Query: 554 VKEANDLHQRLI 565
E + +I
Sbjct: 346 FDEGKKYLEEMI 357
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 79/177 (44%), Gaps = 5/177 (2%)
Query: 116 NDGFTNNKI-----LQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQID 170
N GF +++ L +LC + +L A +L+ M K P +I G + +
Sbjct: 253 NKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAM 312
Query: 171 KGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTII 230
K+++ M+ +G P+ ++ +IGGLC +G +E+M G SP N ++
Sbjct: 313 DARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLV 372
Query: 231 RGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAME 287
+G G EA + ++ G + T+ ++I L+C + + LED E
Sbjct: 373 KGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKE 429
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 144/337 (42%), Gaps = 20/337 (5%)
Query: 141 IEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCK 200
I+I AR P S + +R L +IG K I+ S G PD
Sbjct: 98 IDIAARLHLHPTVWSLIHRMRSL-RIGPSPKTFAIVAERYASAGKPD------------- 143
Query: 201 RGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLIT 260
AV L +M GC D ++NTI+ + +A ++ LR +T
Sbjct: 144 -----KAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFR-ALRGRFSVDTVT 197
Query: 261 YTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLL 320
Y V++ C +ALEVL++M G P++ TYN+++ + G + +
Sbjct: 198 YNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMK 257
Query: 321 SRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLD 380
R + + VTY T++H G +V + M P+ TYN M+ LCK ++
Sbjct: 258 KRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVE 317
Query: 381 RAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAI 440
A+ ++ MV P++ TYN L+ GL G G +L+ + C P TYN+ I
Sbjct: 318 NAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMI 377
Query: 441 DGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWG 477
+ +E A L+ +M +P+ T++ L G
Sbjct: 378 RYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISG 414
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 127/279 (45%), Gaps = 5/279 (1%)
Query: 167 GQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSG-CSPDAIT 225
G+ DK K+ M G D+ + N ++ LCK ++ A +L +L G S D +T
Sbjct: 140 GKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFR--ALRGRFSVDTVT 197
Query: 226 YNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIR-ALEVLEDM 284
YN I+ G +A+ K+ + +G P L TY +++ R G IR A E +M
Sbjct: 198 YNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFR-AGQIRHAWEFFLEM 256
Query: 285 AMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYW 344
C D++TY ++V G + V ++ G+ P+ TYN +I L
Sbjct: 257 KKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNV 316
Query: 345 DGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTL 404
+ + E M P TYN+++ GL +G R L M +E C P+ TYN +
Sbjct: 317 ENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMM 376
Query: 405 LSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGL 443
+ + V++ + L + +C P L TYNI I G+
Sbjct: 377 IRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 415
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 138/315 (43%), Gaps = 38/315 (12%)
Query: 250 LRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVY 309
LR G P T+ ++ E +A+++ +M GC+ D+ ++N+++ K
Sbjct: 120 LRIGPSPK--TFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRV 177
Query: 310 EETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIM 369
E+ Y + L R VD V TYN++
Sbjct: 178 EKAYELFRALRGRF----------------------SVDTV--------------TYNVI 201
Query: 370 LNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNC 429
LNG C +A+ + MV P++ TYNT+L G + G + + + +C
Sbjct: 202 LNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDC 261
Query: 430 SPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAME 489
+VTY + G G ++ A+ ++ EMI +G++P T++++ C D +E A+
Sbjct: 262 EIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVV 321
Query: 490 LLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVA 549
+ +EM ++ + T Y +I GL + + + M C+P+ + Y+ +I+ +
Sbjct: 322 MFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYS 381
Query: 550 DSGMVKEANDLHQRL 564
+ V++A L +++
Sbjct: 382 ECSEVEKALGLFEKM 396
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 152/342 (44%), Gaps = 6/342 (1%)
Query: 185 VPDVITCNMVIGGLCKRGYLKSAV-DLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAV 243
V D + ++ I + R +L V L+ M P T+ + G ++AV
Sbjct: 88 VHDASSFDLAID-IAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAV 146
Query: 244 SFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYP-DIITYNSLVSF 302
+ + GC L ++ +++++C+ +A E+ A+ G + D +TYN +++
Sbjct: 147 KLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFR--ALRGRFSVDTVTYNVILNG 204
Query: 303 TAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPT 362
+ V+ ++ RG+ PN TYNT++ G + M +
Sbjct: 205 WCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEID 264
Query: 363 RVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLY 422
VTY +++G +G + RA +++ M+ E P + TYN ++ LCK+ V+ + +
Sbjct: 265 VVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFE 324
Query: 423 LLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVD 482
+ P + TYN+ I GL G +EL M +G P+ T++ + +
Sbjct: 325 EMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECS 384
Query: 483 QLEEAMELLKEMHKKDEKIKHTAYRCVILGL-CKQRKVDIAI 523
++E+A+ L ++M D Y +I G+ ++R D+ +
Sbjct: 385 EVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVV 426
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 135/291 (46%), Gaps = 2/291 (0%)
Query: 274 AIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNT 333
A++ L++ E + D +++ + A+ ++ + +I + S + P+ T+
Sbjct: 73 ALQFFHFLDNHHREYVH-DASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAI 131
Query: 334 LIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSES 393
+ +S G D + M+E ++N +L+ LCKS +++A L+ +
Sbjct: 132 VAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRF 191
Query: 394 CFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAK 453
D VTYN +L+G C + +++L + +P L TYN + G R G + A
Sbjct: 192 SV-DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAW 250
Query: 454 ELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGL 513
E + EM + D +T++++ GF +++ A + EM ++ Y +I L
Sbjct: 251 EFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVL 310
Query: 514 CKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
CK+ V+ A+ + MVR +P+ Y+ LI+ + +G +L QR+
Sbjct: 311 CKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRM 361
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 115/252 (45%), Gaps = 1/252 (0%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N IL LC R+ A L + + + + ++ G I + K +++ MV
Sbjct: 165 NTILDVLCKSKRVEKAYELFRALRGRFSVDTV-TYNVILNGWCLIKRTPKALEVLKEMVE 223
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
G P++ T N ++ G + G ++ A + +M C D +TY T++ G G
Sbjct: 224 RGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKR 283
Query: 242 AVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVS 301
A + + + +R+G P + TY +I+++C+ A+ + E+M G P++ TYN L+
Sbjct: 284 ARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIR 343
Query: 302 FTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPP 361
G + ++ + + G +PN TYN +I S + + E M P
Sbjct: 344 GLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLP 403
Query: 362 TRVTYNIMLNGL 373
TYNI+++G+
Sbjct: 404 NLDTYNILISGM 415
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 1/205 (0%)
Query: 361 PTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQL 420
P+ T+ I+ +G D+A+ L+ M CF D+ ++NT+L LCK V++ +L
Sbjct: 124 PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL 183
Query: 421 LYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCG 480
L G S VTYN+ ++G + A E+ EM+ +GI P+ T++++ GF
Sbjct: 184 FRALRG-RFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFR 242
Query: 481 VDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKI 540
Q+ A E EM K+D +I Y V+ G ++ A D M+R P
Sbjct: 243 AGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVAT 302
Query: 541 YDALIKAVADSGMVKEANDLHQRLI 565
Y+A+I+ + V+ A + + ++
Sbjct: 303 YNAMIQVLCKKDNVENAVVMFEEMV 327
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 87/182 (47%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T N +L+ G++ A M ++ + T ++ G G+I + + + M
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEM 291
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
+ G +P V T N +I LCK+ +++AV + E+M G P+ TYN +IRG+F G F
Sbjct: 292 IREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEF 351
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
+ + +GC P TY ++I +AL + E M C P++ TYN L
Sbjct: 352 SRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNIL 411
Query: 300 VS 301
+S
Sbjct: 412 IS 413
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 5/137 (3%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T N ++Q LC + + A + E M R+ P+ + LIRGL G+ +G +++ M
Sbjct: 302 TYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRM 361
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
G P+ T NM+I + ++ A+ L E M C P+ TYN +I GMF +
Sbjct: 362 ENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRS 421
Query: 240 NEAV-----SFWKDQLR 251
+ V +F K+ LR
Sbjct: 422 EDMVVAGNQAFAKEILR 438
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 115/253 (45%), Gaps = 15/253 (5%)
Query: 326 PNAVTYNTLIHSLSSHG-----YWDGVDDV-LEIMNETSSPPTRVTYNIMLNGLCKSGLL 379
PN V N+++ L +HG ++ +D+ E +++ SS +++ ++ + L
Sbjct: 56 PNLV--NSVLKRLWNHGPKALQFFHFLDNHHREYVHDASS------FDLAIDIAARLHLH 107
Query: 380 DRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIA 439
SL M S P T+ + G D+ ++L + C L ++N
Sbjct: 108 PTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTI 167
Query: 440 IDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDE 499
+D L + +E A EL+ + G+ V D +T++ + G+C + + +A+E+LKEM ++
Sbjct: 168 LDVLCKSKRVEKAYELFRALRGRFSV-DTVTYNVILNGWCLIKRTPKALEVLKEMVERGI 226
Query: 500 KIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEAND 559
T Y ++ G + ++ A + M + C+ D Y ++ +G +K A +
Sbjct: 227 NPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARN 286
Query: 560 LHQRLIEWKILKT 572
+ +I +L +
Sbjct: 287 VFDEMIREGVLPS 299
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T ++ G + A + + M R+ +P + +I+ L K ++ +
Sbjct: 264 DVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMF 323
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
MV G P+V T N++I GL G +L++ M GC P+ TYN +IR +
Sbjct: 324 EEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSEC 383
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLI 265
+A+ ++ C P L TY +LI
Sbjct: 384 SEVEKALGLFEKMGSGDCLPNLDTYNILI 412
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 156/359 (43%), Gaps = 7/359 (1%)
Query: 125 LQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIG---QIDKGCKIINIMVM 181
L T R +A ++ E++ + Q+ + P+ ++ ++ +G Q +K ++ M+
Sbjct: 121 LHERITALRWESAIQVFELL--REQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMIN 178
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLS-GCSPDAITYNTIIRGMFDKGNFN 240
G V + ++ + G +A L+E M S C PD TY+ +I+ F+
Sbjct: 179 EGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFD 238
Query: 241 EAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEG-CYPDIITYNSL 299
+ D R+G P ITY LI+ + + L M E C PD T NS
Sbjct: 239 KVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNST 298
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS 359
+ G E S G++PN T+N L+ S G + + V+E M +
Sbjct: 299 LRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHY 358
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQ 419
T VTYN++++ ++G L + L+ M SE FP VT +L+ + D+
Sbjct: 359 SWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGG 418
Query: 420 LLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGF 478
+L + ++ LV +N +D RM K + M KG PD+IT+ ++ +
Sbjct: 419 VLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAY 477
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 147/323 (45%), Gaps = 2/323 (0%)
Query: 241 EAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDM-AMEGCYPDIITYNSL 299
+A +++ + +GC YT L+ R A +LE M + C PD+ TY+ L
Sbjct: 168 KAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSIL 227
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVL-EIMNETS 358
+ + +++ ++S++ +G++PN +TYNTLI + + ++ L +++ E
Sbjct: 228 IKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDD 287
Query: 359 SPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGI 418
P T N L +G ++ + Y S P+I T+N LL K G +
Sbjct: 288 CKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMS 347
Query: 419 QLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGF 478
++ + + S +VTYN+ ID R G ++ + L+ M + I P +T SL +
Sbjct: 348 AVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAY 407
Query: 479 CGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDE 538
+ ++ +L+ + D ++ + C++ + K L+LM + KPD+
Sbjct: 408 GRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDK 467
Query: 539 KIYDALIKAVADSGMVKEANDLH 561
Y ++KA SGM +LH
Sbjct: 468 ITYRTMVKAYRISGMTTHVKELH 490
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 146/338 (43%), Gaps = 5/338 (1%)
Query: 193 MVIGGLCKRGYLKSAVDLVEDMS---LSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQ 249
+++ LCK G+++ A +E + S P +N ++ G F +A W++
Sbjct: 217 VLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEM 276
Query: 250 LRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVY 309
P ++TY LIE CR A+EVLE+M M + + +N ++ + G
Sbjct: 277 KAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRL 336
Query: 310 EETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIM 369
E ++ P VTYN+L+ + G G +L++M PT TYN
Sbjct: 337 SEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHF 396
Query: 370 LNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNC 429
K + ++LY ++ PD +TY+ +L LC++G + +Q+ +
Sbjct: 397 FKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGI 456
Query: 430 SPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGF--CGVDQLEEA 487
P L+T + I L R+ +E A E + + +GI+P IT + G G+ + +
Sbjct: 457 DPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKR 516
Query: 488 MELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQA 525
+ L +K+ +T V K R+ I +A
Sbjct: 517 LSSLMSSLPHSKKLPNTYREAVDAPPDKDRRKSILHRA 554
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 104/236 (44%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T +++ C R+ A ++E M +F +I GL + G++ + ++
Sbjct: 287 TYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERF 346
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
+ P ++T N ++ CK G L A +++ M G P TYN +
Sbjct: 347 FVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKT 406
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
E ++ + + G P +TY ++++++C A++V ++M G PD++T L
Sbjct: 407 EEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTML 466
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMN 355
+ + + EE + N + RG+ P +T+ + + L S G D + +M+
Sbjct: 467 IHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLMS 522
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/342 (19%), Positives = 136/342 (39%), Gaps = 10/342 (2%)
Query: 226 YNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYC------GAIRALE 279
+++++ + F A S D++R L++ I L+ RY AIRA E
Sbjct: 138 FDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFE 197
Query: 280 VLEDM-AMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNL---LSRGMQPNAVTYNTLI 335
+ ++ L+ K+G E + + + + P+ +N L+
Sbjct: 198 FARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILL 257
Query: 336 HSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCF 395
+ + + E M + PT VTY ++ G C+ + A+ + M
Sbjct: 258 NGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEME 317
Query: 396 PDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKEL 455
+ + +N ++ GL + G + E + ++ P +VTYN + + G + A ++
Sbjct: 318 INFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKI 377
Query: 456 YSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCK 515
M+ +G+ P T++ F ++ EE M L ++ + Y ++ LC+
Sbjct: 378 LKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCE 437
Query: 516 QRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
K+ +A+Q M PD LI + M++EA
Sbjct: 438 DGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEA 479
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 5/226 (2%)
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
M+ P R+ +NI+LNG +S L +A L+ M + + P +VTY TL+ G C+
Sbjct: 242 MDSNWVPSVRI-FNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRR 300
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSS 473
V +++L + + +N IDGL G + A + P +T++S
Sbjct: 301 VQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNS 360
Query: 474 LAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSR 533
L FC L A ++LK M + T Y K K + + ++ +
Sbjct: 361 LVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAG 420
Query: 534 CKPDEKIYDALIKAVADSGMVKEA----NDLHQRLIEWKILKTEII 575
PD Y ++K + + G + A ++ R I+ +L T ++
Sbjct: 421 HSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTML 466
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 139/328 (42%), Gaps = 1/328 (0%)
Query: 159 LIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSG 218
+ R + + C+ N MV G P V + ++ LC + ++ A + G
Sbjct: 144 VFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFG 203
Query: 219 CSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRAL 278
P A TY+ ++RG + + A + + L + C L+ Y L++ +C+
Sbjct: 204 IVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGY 263
Query: 279 EVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSL 338
++ ++M G PD ++ + G Y V+ + + PN T+N +I +L
Sbjct: 264 KMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTL 323
Query: 339 SSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDI 398
+ D +L+ M + + P TYN ++ C ++RA L S M C PD
Sbjct: 324 CKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDR 383
Query: 399 VTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLAR-MGSMESAKELYS 457
TYN +L L + G D ++ ++ P + TY + I GL R G +E A +
Sbjct: 384 HTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFE 443
Query: 458 EMIGKGIVPDEITHSSLAWGFCGVDQLE 485
MI +GI P T L G Q++
Sbjct: 444 MMIDEGIPPYSTTVEMLRNRLVGWGQMD 471
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 126/278 (45%), Gaps = 1/278 (0%)
Query: 218 GCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRA 277
G P + ++ + DK + N A F+ G P TY++L+ R A A
Sbjct: 168 GIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGA 227
Query: 278 LEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHS 337
+V ++M C D++ YN+L+ K G + Y + + + G++P+A ++ IH+
Sbjct: 228 RKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHA 287
Query: 338 LSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPD 397
G VL+ M P T+N ++ LCK+ +D A L M+ + PD
Sbjct: 288 YCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPD 347
Query: 398 IVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYS 457
TYN++++ C V+ +LL + T C P TYN+ + L R+G + A E++
Sbjct: 348 TWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWE 407
Query: 458 EMIGKGIVPDEITHSSLAWGFCGVD-QLEEAMELLKEM 494
M + P T++ + G +LEEA + M
Sbjct: 408 GMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMM 445
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 130/295 (44%), Gaps = 1/295 (0%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
+++L +LC + + A +P + + L+RG +I K+ + M+
Sbjct: 177 DQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLE 236
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
V D++ N ++ LCK G + + ++M G PDA ++ I D G+ +
Sbjct: 237 RNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHS 296
Query: 242 AVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVS 301
A R P + T+ +I+ +C+ A +L++M +G PD TYNS+++
Sbjct: 297 AYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMA 356
Query: 302 FTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPP 361
+ ++S + P+ TYN ++ L G +D ++ E M+E P
Sbjct: 357 YHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYP 416
Query: 362 TRVTYNIMLNGLC-KSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVD 415
T TY +M++GL K G L+ A + M+ E P T L + L G +D
Sbjct: 417 TVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMD 471
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 141/320 (44%), Gaps = 9/320 (2%)
Query: 258 LITYTVLIELVCRYCGAIRALEVLEDM---AMEGCYPDIITYNSLVSFTA--KQGVYEET 312
L +Y +L+E++ G+ + +L D A E Y +I + + F A + + E
Sbjct: 102 LESYHILVEIL----GSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEA 157
Query: 313 YLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNG 372
+ ++ G++P + L+HSL + + + P+ TY+I++ G
Sbjct: 158 CRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRG 217
Query: 373 LCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPG 432
+ A ++ M+ +C D++ YN LL LCK G VD G ++ + P
Sbjct: 218 WARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPD 277
Query: 433 LVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLK 492
++ I I G + SA ++ M +VP+ T + + C +++++A LL
Sbjct: 278 AYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLD 337
Query: 493 EMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSG 552
EM +K Y ++ C +V+ A + L M R++C PD Y+ ++K + G
Sbjct: 338 EMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIG 397
Query: 553 MVKEANDLHQRLIEWKILKT 572
A ++ + + E K T
Sbjct: 398 RFDRATEIWEGMSERKFYPT 417
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 1/179 (0%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
++ D ++ + C G + +A ++++ M R +P+ + ++I+ L K ++D
Sbjct: 274 LKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAY 333
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
+++ M+ G PD T N ++ C + A L+ M + C PD TYN +++ +
Sbjct: 334 LLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLL 393
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAI-RALEVLEDMAMEGCYP 291
G F+ A W+ + P + TYTV+I + R G + A E M EG P
Sbjct: 394 IRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPP 452
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 106/245 (43%), Gaps = 1/245 (0%)
Query: 323 GMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRA 382
G+ P+A TY+ L+ + G V + M E + + YN +L+ LCKSG +D
Sbjct: 203 GIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGG 262
Query: 383 ISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDG 442
++ M + PD ++ + C G V ++L + + P + T+N I
Sbjct: 263 YKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKT 322
Query: 443 LARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIK 502
L + ++ A L EMI KG PD T++S+ C ++ A +LL M +
Sbjct: 323 LCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPD 382
Query: 503 HTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKA-VADSGMVKEANDLH 561
Y V+ L + + D A + + M + P Y +I V G ++EA
Sbjct: 383 RHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYF 442
Query: 562 QRLIE 566
+ +I+
Sbjct: 443 EMMID 447
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 146/319 (45%), Gaps = 9/319 (2%)
Query: 185 VPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMF---DKGNFNE 241
+PD + +I + K+G + A+ L +M SGC PDA YN +I DK E
Sbjct: 130 IPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALE 189
Query: 242 AVSFWKDQLR--KGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
V + D+++ + C P ++TY +L+ + + + +D+ M PD+ T+N +
Sbjct: 190 KVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGV 249
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS 359
+ K G+ +E V++ + S +P+ +T+N LI S ++ ++ + + +
Sbjct: 250 MDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKE 309
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYN--TLLSGLCKEGFVDEG 417
PT T+N M+ K+ ++D+A ++ M + P +TY ++ G C G V
Sbjct: 310 KPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRA 367
Query: 418 IQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWG 477
++ + ++ T N ++ R G A +L+ + PD T+ L
Sbjct: 368 REIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKA 427
Query: 478 FCGVDQLEEAMELLKEMHK 496
+ D E+ L+K+M K
Sbjct: 428 YTKADMKEQVQILMKKMEK 446
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 145/315 (46%), Gaps = 17/315 (5%)
Query: 261 YTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSF------TAKQGVYEETYL 314
Y+ LI ++ + A+ + +M GC PD YN+L++ AK YL
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYL 195
Query: 315 VISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLC 374
+ R QPN VTYN L+ + + G D V+ + + ++ + P T+N +++
Sbjct: 196 DKMKGIER-CQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYG 254
Query: 375 KSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLV 434
K+G++ ++ + M S C PDI+T+N L+ K+ ++ Q L + P L
Sbjct: 255 KNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLP 314
Query: 435 TYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSS--LAWGFCGVDQLEEAMELLK 492
T+N I + ++ A+ ++ +M +P IT+ + +G+CG + A E+ +
Sbjct: 315 TFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCG--SVSRAREIFE 372
Query: 493 EMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRS---RCKPDEKIYDALIKAVA 549
E+ + D +K + ++ C+ + I+A L + R PD Y L KA
Sbjct: 373 EVGESDRVLKASTLNAMLEVYCRN---GLYIEADKLFHNASAFRVHPDASTYKFLYKAYT 429
Query: 550 DSGMVKEANDLHQRL 564
+ M ++ L +++
Sbjct: 430 KADMKEQVQILMKKM 444
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 138/327 (42%), Gaps = 11/327 (3%)
Query: 150 IPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLC----KRGYLK 205
IP + LI + K GQ + + M SG PD N +I K L+
Sbjct: 130 IPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALE 189
Query: 206 SAVDLVEDMS-LSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVL 264
++ M + C P+ +TYN ++R G ++ + +KD P + T+ +
Sbjct: 190 KVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGV 249
Query: 265 IELVCRYCGAIRALE-VLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRG 323
++ + G I+ +E VL M C PDIIT+N L+ K+ +E+ +L+
Sbjct: 250 MDAYGK-NGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSK 308
Query: 324 MQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYN--IMLNGLCKSGLLDR 381
+P T+N++I + D + V + MN+ + P+ +TY IM+ G C G + R
Sbjct: 309 EKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSR 366
Query: 382 AISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAID 441
A ++ + T N +L C+ G E +L + + P TY
Sbjct: 367 AREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYK 426
Query: 442 GLARMGSMESAKELYSEMIGKGIVPDE 468
+ E + L +M GIVP++
Sbjct: 427 AYTKADMKEQVQILMKKMEKDGIVPNK 453
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 122/305 (40%), Gaps = 31/305 (10%)
Query: 263 VLIELVCRYCGAIRALEVLEDMAMEGCY-PDIITYNSLVSFTAKQGVYEETYLVISNLLS 321
+L E + + ++ LEV M + Y PD Y+ L+S K+G + S + +
Sbjct: 102 LLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKN 161
Query: 322 RGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDR 381
G +P+A YN LI ++H + LE + G LD+
Sbjct: 162 SGCRPDASVYNALI---TAHLHTRDKAKALEKVR---------------------GYLDK 197
Query: 382 AISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAID 441
+ E C P++VTYN LL + G VD+ L L + SP + T+N +D
Sbjct: 198 MKGI------ERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMD 251
Query: 442 GLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKI 501
+ G ++ + + + M PD IT + L + + E+ + K + + EK
Sbjct: 252 AYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKP 311
Query: 502 KHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLH 561
+ +I+ K R +D A M P Y+ +I G V A ++
Sbjct: 312 TLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIF 371
Query: 562 QRLIE 566
+ + E
Sbjct: 372 EEVGE 376
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 101/245 (41%), Gaps = 2/245 (0%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T N +L+ G++ L + + P + ++ K G I + ++ M
Sbjct: 210 TYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM 269
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
+ PD+IT N++I K+ + + + S P T+N++I
Sbjct: 270 RSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMI 329
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAI-RALEVLEDMAMEGCYPDIITYNS 298
++A +K P ITY +I ++ YCG++ RA E+ E++ T N+
Sbjct: 330 DKAEWVFKKMNDMNYIPSFITYECMI-MMYGYCGSVSRAREIFEEVGESDRVLKASTLNA 388
Query: 299 LVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETS 358
++ + G+Y E + N + + P+A TY L + + + V +++ M +
Sbjct: 389 MLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDG 448
Query: 359 SPPTR 363
P +
Sbjct: 449 IVPNK 453
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 177/416 (42%), Gaps = 49/416 (11%)
Query: 142 EIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVP-DVITCNMVIGGLCK 200
E ++ +IPH P+ N + L + + K N + P + I N+ + L
Sbjct: 139 EFLSLLDEIPHPPNRDNALLVLNSLREWQKTHTFFNWVKSKSLFPMETIFYNVTMKSL-- 196
Query: 201 RGYLKSAVDLVEDMSLS----GCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPP 256
L+E+M+L G D ITY+TII K C
Sbjct: 197 --RFGRQFQLIEEMALEMVKDGVELDNITYSTII------------------TCAKRCNL 236
Query: 257 YLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVI 316
Y +A+E E M G PD +TY++++ +K G EE +
Sbjct: 237 Y-----------------NKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLY 279
Query: 317 SNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKS 376
++ G +P+A+ ++ L G +DG+ VL+ M P V YN +L + ++
Sbjct: 280 ERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRA 339
Query: 377 GLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTY 436
G A SL++ M+ P+ T L+ K + + +QL + + Y
Sbjct: 340 GKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILY 399
Query: 437 NIAIDGLARMGSMESAKELYSEMIGKGIV---PDEITHSSLAWGFCGVDQLEEAMELLKE 493
N ++ A +G E A+ L+++M K V PD +++++ + + E+AMEL +E
Sbjct: 400 NTLLNMCADIGLEEEAERLFNDM--KESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEE 457
Query: 494 MHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVA 549
M K ++ C++ L K +++D + DL ++ KPD+++ L+ +A
Sbjct: 458 MLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMA 513
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 120/250 (48%), Gaps = 3/250 (1%)
Query: 319 LLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGL 378
++ G++ + +TY+T+I ++ + E M +T P VTY+ +L+ KSG
Sbjct: 212 MVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGK 271
Query: 379 LDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNI 438
++ +SLY V+ PD + ++ L + G D +L + + P +V YN
Sbjct: 272 VEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNT 331
Query: 439 AIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKD 498
++ + R G A+ L++EM+ G+ P+E T ++L + +A++L +EM K
Sbjct: 332 LLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKK 391
Query: 499 EKIKHTAYRCVILGLCKQRKVDIAIQAL--DLMVRSRCKPDEKIYDALIKAVADSGMVKE 556
+ Y +L +C ++ + L D+ +C+PD Y A++ G ++
Sbjct: 392 WPMDFILYN-TLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEK 450
Query: 557 ANDLHQRLIE 566
A +L + +++
Sbjct: 451 AMELFEEMLK 460
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 96/233 (41%), Gaps = 6/233 (2%)
Query: 332 NTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVS 391
N+L +H +++ V +++ P + YN+ + L + MV
Sbjct: 161 NSLREWQKTHTFFNWVK------SKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVK 214
Query: 392 ESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMES 451
+ D +TY+T+++ + ++ I+ + T P VTY+ +D ++ G +E
Sbjct: 215 DGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEE 274
Query: 452 AKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVIL 511
LY + G PD I S L F + +L+EM D K Y ++
Sbjct: 275 VLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLE 334
Query: 512 GLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
+ + K +A + M+ + P+EK AL+K + ++A L + +
Sbjct: 335 AMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEM 387
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 122/275 (44%)
Query: 218 GCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRA 277
G D YN + G+F A + +G PP + +LI + +R
Sbjct: 153 GYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRV 212
Query: 278 LEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHS 337
V E M G P + YN ++ K G ++ V + G+ + T+ L+
Sbjct: 213 YYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKG 272
Query: 338 LSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPD 397
L G + + ++L+ M E P Y M+ L G LD ++ ++ M + PD
Sbjct: 273 LCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPD 332
Query: 398 IVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYS 457
++ Y TL+ GLCK+G V+ G +L + G Y + I+G G + SA L+
Sbjct: 333 VMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWE 392
Query: 458 EMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLK 492
+++ G + D ++++ G C V+Q+++A +L +
Sbjct: 393 DLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQ 427
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/448 (21%), Positives = 183/448 (40%), Gaps = 37/448 (8%)
Query: 159 LIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSG 218
++ L+K G D + G V + T +++ GLCK G ++ +++++ M +
Sbjct: 234 IMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENL 293
Query: 219 CSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRAL 278
C PD Y +I+ + +GN + ++ W + R P ++ Y L+ +C+ R
Sbjct: 294 CKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGY 353
Query: 279 EVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSL 338
E+ +M + D Y L+ G + +L+ G + YN +I L
Sbjct: 354 ELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGL 413
Query: 339 SSHGYWD--------GVDDVLEIMNETSSPPTRVTYNIM------LNGLCKSGLLDRAIS 384
S D +++ LE ET S P V Y +M N L + G L +S
Sbjct: 414 CSVNQVDKAYKLFQVAIEEELEPDFETLS-PIMVAYVVMNRLSDFSNVLERIGELGYPVS 472
Query: 385 LYSTMVSESCFPD---------------------IVTYNTLLSGLCKEGFVDEGIQLLYL 423
Y T + D + YN L+ L K G + + + L Y
Sbjct: 473 DYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYE 532
Query: 424 LTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQ 483
+ P +Y+IAI G +++A + ++I VP + SL G C + +
Sbjct: 533 MRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGE 592
Query: 484 LEEAMELLKE-MHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYD 542
++ M L++E + + Y + +CK + ++ +D M + +E IY
Sbjct: 593 IDAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYC 652
Query: 543 ALIKAVADSGMVKEANDLHQRLIEWKIL 570
A+I ++ G +K A ++ L + K++
Sbjct: 653 AIISGMSKHGTIKVAREVFTELKKRKVM 680
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 123/280 (43%)
Query: 287 EGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDG 346
+G D YN+ + G + + + S+G P+ + LI + +
Sbjct: 152 KGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLR 211
Query: 347 VDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLS 406
V V E M + P YN +++ L K+G D A+++Y + + T+ L+
Sbjct: 212 VYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVK 271
Query: 407 GLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVP 466
GLCK G ++E +++L + C P + Y I L G+++++ ++ EM I P
Sbjct: 272 GLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKP 331
Query: 467 DEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQAL 526
D + + +L G C ++E EL EM K I YR +I G KV A
Sbjct: 332 DVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLW 391
Query: 527 DLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
+ +V S D IY+A+IK + V +A L Q IE
Sbjct: 392 EDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIE 431
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/414 (21%), Positives = 154/414 (37%), Gaps = 34/414 (8%)
Query: 187 DVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFW 246
D N L + G+ ++A L E M G P + +IR D +
Sbjct: 157 DFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVY 216
Query: 247 KDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQ 306
+ + G P + Y +++ + + AL V ED +G + T+ LV K
Sbjct: 217 EKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKA 276
Query: 307 GVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTY 366
G EE ++ + +P+ Y +I +L S G D V + M P + Y
Sbjct: 277 GRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAY 336
Query: 367 NIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTG 426
++ GLCK G ++R L+ M + D Y L+ G +G V L L
Sbjct: 337 GTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVD 396
Query: 427 TNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEE 486
+ + YN I GL + ++ A +L+ I + + PD T S + + +++L +
Sbjct: 397 SGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSD 456
Query: 487 AMELLKEMHK-----------------KDEKIKHTA-----------------YRCVILG 512
+L+ + + DE+ A Y ++
Sbjct: 457 FSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEA 516
Query: 513 LCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
L K + ++ M + +PD Y I + G VK A H+++IE
Sbjct: 517 LYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIE 570
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 98/250 (39%), Gaps = 35/250 (14%)
Query: 321 SRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLD 380
+G + + YN + L+ +G++ D + E+M+ PP+ + I++ +
Sbjct: 151 QKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGL 210
Query: 381 RAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAI 440
R +Y M K GF P + YN +
Sbjct: 211 RVYYVYEKMK-------------------KFGF----------------KPRVFLYNRIM 235
Query: 441 DGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEK 500
D L + G + A +Y + G+V + T L G C ++EE +E+L+ M + K
Sbjct: 236 DALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCK 295
Query: 501 IKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDL 560
AY +I L + +D +++ D M R KPD Y L+ + G V+ +L
Sbjct: 296 PDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYEL 355
Query: 561 HQRLIEWKIL 570
+ +IL
Sbjct: 356 FMEMKGKQIL 365
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 80/180 (44%), Gaps = 3/180 (1%)
Query: 159 LIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSG 218
L+ L K+G I K + M G PD + ++ I ++G +K+A E +
Sbjct: 513 LMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMS 572
Query: 219 CSPDAITYNTIIRGMFDKGNFNEAVSFWKDQL-RKGCPPYLITYTVLIELVCRYCGAIRA 277
C P Y ++ +G+ G + + ++ L P Y + + VC+ A +
Sbjct: 573 CVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKV 632
Query: 278 LEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNA--VTYNTLI 335
++V+++M EG + + + Y +++S +K G + V + L R + A V Y ++
Sbjct: 633 MKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTEADMVVYEEML 692
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 108/219 (49%)
Query: 276 RALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLI 335
RA+E+L M GC+P ++N +++ +++E + + + G++ +A N LI
Sbjct: 150 RAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILI 209
Query: 336 HSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCF 395
L G + +L+ + S P +T++ ++ G C G + A L M E
Sbjct: 210 KGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIE 269
Query: 396 PDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKEL 455
PD +T+N L+SGL K+G V+EGI LL + C P TY + GL AKE+
Sbjct: 270 PDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEM 329
Query: 456 YSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEM 494
S+MI G+ P +++ + G C + E +L++M
Sbjct: 330 MSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQM 368
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 111/232 (47%), Gaps = 10/232 (4%)
Query: 323 GMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVT-----YNIMLNGLCKSG 377
G P++ ++N +++ L S +D + + S+P V NI++ GLC+SG
Sbjct: 162 GCWPSSKSFNFILNLLVSAKLFDEIHKIF-----VSAPKLGVEIDACCLNILIKGLCESG 216
Query: 378 LLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYN 437
L+ A+ L + P+++T++ L+ G C +G +E +LL + P +T+N
Sbjct: 217 NLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFN 276
Query: 438 IAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKK 497
I I GL + G +E +L M KG P+ T+ + +G + EA E++ +M
Sbjct: 277 ILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISW 336
Query: 498 DEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVA 549
+ +Y+ ++LGLC+ + V L MV P ++ +++ V
Sbjct: 337 GMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCVV 388
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 88/180 (48%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N +++ LC G L AA +L++ ++ P+ + + LIRG G+ ++ K++ M
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
PD IT N++I GL K+G ++ +DL+E M + GC P+ TY ++ G+ DK E
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 242 AVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVS 301
A + G P ++Y ++ +C + VL M G P + + +V
Sbjct: 326 AKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQ 385
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 109/245 (44%), Gaps = 2/245 (0%)
Query: 325 QPNAVTYNTLIHSLSSHGYWDGVDDVLEI--MNETSSPPTRVTYNIMLNGLCKSGLLDRA 382
QP Y +I+ +D +++V+ + + YN+M +G ++RA
Sbjct: 92 QPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRA 151
Query: 383 ISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDG 442
I + M C+P ++N +L+ L DE ++ NI I G
Sbjct: 152 IEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKG 211
Query: 443 LARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIK 502
L G++E+A +L E + P+ +T S L GFC + EEA +LL+ M K+ +
Sbjct: 212 LCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPD 271
Query: 503 HTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQ 562
+ +I GL K+ +V+ I L+ M C+P+ Y ++ + D EA ++
Sbjct: 272 TITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMS 331
Query: 563 RLIEW 567
++I W
Sbjct: 332 QMISW 336
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 114/235 (48%), Gaps = 4/235 (1%)
Query: 139 RLIEIMARKSQIPHFPSCT--NLIRGLIKIGQIDKGCKIINIMVMSGGVP-DVITCNMVI 195
R IEI+ +PS N I L+ ++ I + GV D N++I
Sbjct: 150 RAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILI 209
Query: 196 GGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCP 255
GLC+ G L++A+ L+++ P+ +T++ +IRG +KG F EA + ++
Sbjct: 210 KGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIE 269
Query: 256 PYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLV 315
P IT+ +LI + + +++LE M ++GC P+ TY ++ + E +
Sbjct: 270 PDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEM 329
Query: 316 ISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVL-EIMNETSSPPTRVTYNIM 369
+S ++S GM+P+ ++Y ++ L +D VL +++N P T + + ++
Sbjct: 330 MSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVV 384
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 99/215 (46%)
Query: 202 GYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITY 261
G + A++++ M GC P + ++N I+ + F+E + + G
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205
Query: 262 TVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLS 321
+LI+ +C AL++L++ + P+++T++ L+ +G +EE + ++ +
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 322 RGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDR 381
++P+ +T+N LI L G + D+LE M P TY +L GL
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 382 AISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDE 416
A + S M+S P ++Y ++ GLC+ V E
Sbjct: 326 AKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVE 360
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 95/205 (46%)
Query: 361 PTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQL 420
P+ ++N +LN L + L D ++ + D N L+ GLC+ G ++ +QL
Sbjct: 165 PSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQL 224
Query: 421 LYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCG 480
L P ++T++ I G G E A +L M + I PD IT + L G
Sbjct: 225 LDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRK 284
Query: 481 VDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKI 540
++EE ++LL+ M K + Y+ V+ GL +++ A + + M+ +P
Sbjct: 285 KGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLS 344
Query: 541 YDALIKAVADSGMVKEANDLHQRLI 565
Y ++ + ++ V E + + ++++
Sbjct: 345 YKKMVLGLCETKSVVEMDWVLRQMV 369
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 73/159 (45%)
Query: 110 PPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQI 169
P R + T + +++ C +G+ A +L+E M ++ P + LI GL K G++
Sbjct: 229 PQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRV 288
Query: 170 DKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTI 229
++G ++ M + G P+ T V+ GL + A +++ M G P ++Y +
Sbjct: 289 EEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKM 348
Query: 230 IRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELV 268
+ G+ + + E + + G P + + +++ V
Sbjct: 349 VLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCV 387
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 146/319 (45%), Gaps = 9/319 (2%)
Query: 185 VPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMF---DKGNFNE 241
+PD + +I + K+G + A+ L +M SGC PDA YN +I DK E
Sbjct: 130 IPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALE 189
Query: 242 AVSFWKDQLR--KGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
V + D+++ + C P ++TY +L+ + + + +D+ M PD+ T+N +
Sbjct: 190 KVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGV 249
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS 359
+ K G+ +E V++ + S +P+ +T+N LI S ++ ++ + + +
Sbjct: 250 MDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKE 309
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYN--TLLSGLCKEGFVDEG 417
PT T+N M+ K+ ++D+A ++ M + P +TY ++ G C G V
Sbjct: 310 KPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRA 367
Query: 418 IQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWG 477
++ + ++ T N ++ R G A +L+ + PD T+ L
Sbjct: 368 REIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKA 427
Query: 478 FCGVDQLEEAMELLKEMHK 496
+ D E+ L+K+M K
Sbjct: 428 YTKADMKEQVQILMKKMEK 446
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 145/315 (46%), Gaps = 17/315 (5%)
Query: 261 YTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSF------TAKQGVYEETYL 314
Y+ LI ++ + A+ + +M GC PD YN+L++ AK YL
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYL 195
Query: 315 VISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLC 374
+ R QPN VTYN L+ + + G D V+ + + ++ + P T+N +++
Sbjct: 196 DKMKGIER-CQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYG 254
Query: 375 KSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLV 434
K+G++ ++ + M S C PDI+T+N L+ K+ ++ Q L + P L
Sbjct: 255 KNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLP 314
Query: 435 TYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSS--LAWGFCGVDQLEEAMELLK 492
T+N I + ++ A+ ++ +M +P IT+ + +G+CG + A E+ +
Sbjct: 315 TFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCG--SVSRAREIFE 372
Query: 493 EMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRS---RCKPDEKIYDALIKAVA 549
E+ + D +K + ++ C+ + I+A L + R PD Y L KA
Sbjct: 373 EVGESDRVLKASTLNAMLEVYCRN---GLYIEADKLFHNASAFRVHPDASTYKFLYKAYT 429
Query: 550 DSGMVKEANDLHQRL 564
+ M ++ L +++
Sbjct: 430 KADMKEQVQILMKKM 444
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 138/327 (42%), Gaps = 11/327 (3%)
Query: 150 IPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLC----KRGYLK 205
IP + LI + K GQ + + M SG PD N +I K L+
Sbjct: 130 IPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALE 189
Query: 206 SAVDLVEDMS-LSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVL 264
++ M + C P+ +TYN ++R G ++ + +KD P + T+ +
Sbjct: 190 KVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGV 249
Query: 265 IELVCRYCGAIRALE-VLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRG 323
++ + G I+ +E VL M C PDIIT+N L+ K+ +E+ +L+
Sbjct: 250 MDAYGK-NGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSK 308
Query: 324 MQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYN--IMLNGLCKSGLLDR 381
+P T+N++I + D + V + MN+ + P+ +TY IM+ G C G + R
Sbjct: 309 EKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSR 366
Query: 382 AISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAID 441
A ++ + T N +L C+ G E +L + + P TY
Sbjct: 367 AREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYK 426
Query: 442 GLARMGSMESAKELYSEMIGKGIVPDE 468
+ E + L +M GIVP++
Sbjct: 427 AYTKADMKEQVQILMKKMEKDGIVPNK 453
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 122/305 (40%), Gaps = 31/305 (10%)
Query: 263 VLIELVCRYCGAIRALEVLEDMAMEGCY-PDIITYNSLVSFTAKQGVYEETYLVISNLLS 321
+L E + + ++ LEV M + Y PD Y+ L+S K+G + S + +
Sbjct: 102 LLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKN 161
Query: 322 RGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDR 381
G +P+A YN LI ++H + LE + G LD+
Sbjct: 162 SGCRPDASVYNALI---TAHLHTRDKAKALEKVR---------------------GYLDK 197
Query: 382 AISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAID 441
+ E C P++VTYN LL + G VD+ L L + SP + T+N +D
Sbjct: 198 MKGI------ERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMD 251
Query: 442 GLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKI 501
+ G ++ + + + M PD IT + L + + E+ + K + + EK
Sbjct: 252 AYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKP 311
Query: 502 KHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLH 561
+ +I+ K R +D A M P Y+ +I G V A ++
Sbjct: 312 TLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIF 371
Query: 562 QRLIE 566
+ + E
Sbjct: 372 EEVGE 376
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 101/245 (41%), Gaps = 2/245 (0%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T N +L+ G++ L + + P + ++ K G I + ++ M
Sbjct: 210 TYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM 269
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
+ PD+IT N++I K+ + + + S P T+N++I
Sbjct: 270 RSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMI 329
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAI-RALEVLEDMAMEGCYPDIITYNS 298
++A +K P ITY +I ++ YCG++ RA E+ E++ T N+
Sbjct: 330 DKAEWVFKKMNDMNYIPSFITYECMI-MMYGYCGSVSRAREIFEEVGESDRVLKASTLNA 388
Query: 299 LVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETS 358
++ + G+Y E + N + + P+A TY L + + + V +++ M +
Sbjct: 389 MLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDG 448
Query: 359 SPPTR 363
P +
Sbjct: 449 IVPNK 453
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 160/368 (43%), Gaps = 40/368 (10%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTN-LIRGLIKIGQIDKGCKIINI 178
T +K+++ L G+ A M + + N L+ L+K I+ ++ +
Sbjct: 205 TMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVF-L 263
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN 238
+ PD T N++I G CK A +++ M ++ +PD +TY + + +G+
Sbjct: 264 KLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGD 323
Query: 239 FNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNS 298
F ++ GC P ++TYT+++ + + AL V E M +GC PD Y+S
Sbjct: 324 FRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSS 383
Query: 299 LVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETS 358
L+ +K G +++ + ++ ++G++ + + YNT+I + H + +L+ M +
Sbjct: 384 LIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEE 443
Query: 359 SPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGI 418
ESC P++ TY LL C + +
Sbjct: 444 --------------------------------GESCSPNVETYAPLLKMCCHKKKMKLLG 471
Query: 419 QLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGF 478
LL+ + + S + TY + I GL G +E A + E + KG+VP + T L
Sbjct: 472 ILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKML---- 527
Query: 479 CGVDQLEE 486
VD+LE+
Sbjct: 528 --VDELEK 533
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 177/415 (42%), Gaps = 31/415 (7%)
Query: 166 IGQIDKGCKIINI-------MVMSGGVPDVITCNMVIGGLCKR---GYLKSAVDLVEDMS 215
+ IDK C +N +V DV+ ++ + +R G+ ++ + S
Sbjct: 99 VEDIDKVCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANS 158
Query: 216 LSGCSPDAITYNTIIRGMFDKGNFNEAVSFWK--DQLRKGCPPYLITYTVLIELVCR--- 270
+G TYN ++ + NF+ W+ +++ K L+T + +++ R
Sbjct: 159 QTGYVHSGHTYNAMVDVLGKCRNFD---LMWELVNEMNKNEESKLVTLDTMSKVMRRLAK 215
Query: 271 ---YCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPN 327
Y A+ A LE G D I NSL+ K+ E + V L ++P+
Sbjct: 216 SGKYNKAVDAF--LEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFD-TIKPD 272
Query: 328 AVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYS 387
A T+N LIH +D ++++M T P VTY + CK G R +
Sbjct: 273 ARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLE 332
Query: 388 TMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMG 447
M C P++VTY ++ L K V E + + + C P Y+ I L++ G
Sbjct: 333 EMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTG 392
Query: 448 SMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKH---- 503
+ A E++ +M +G+ D + ++++ + E A+ LLK M +DE+ +
Sbjct: 393 RFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRM--EDEEGESCSPN 450
Query: 504 -TAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
Y ++ C ++K+ + L MV++ D Y LI+ + SG V+EA
Sbjct: 451 VETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEA 505
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 107/238 (44%), Gaps = 4/238 (1%)
Query: 330 TYNTLIHSLSSHGYWDGVDDVLEIMN--ETSSPPTRVTYNIMLNGLCKSGLLDRAISLYS 387
TYN ++ L +D + +++ MN E S T T + ++ L KSG ++A+ +
Sbjct: 168 TYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFL 227
Query: 388 TM-VSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARM 446
M S D + N+L+ L KE ++ ++ L T P T+NI I G +
Sbjct: 228 EMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDT-IKPDARTFNILIHGFCKA 286
Query: 447 GSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAY 506
+ A+ + M PD +T++S +C E+L+EM + Y
Sbjct: 287 RKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTY 346
Query: 507 RCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
V+ L K ++V A+ + M C PD K Y +LI ++ +G K+A ++ + +
Sbjct: 347 TIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDM 404
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 104/232 (44%), Gaps = 3/232 (1%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
++ D T N ++ C + A ++++M P + T+ + K G +
Sbjct: 269 IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVN 328
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
+++ M +G P+V+T +V+ L K + A+ + E M GC PDA Y+++I +
Sbjct: 329 EMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHIL 388
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCG---AIRALEVLEDMAMEGCY 290
G F +A ++D +G ++ Y +I + A+R L+ +ED E C
Sbjct: 389 SKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCS 448
Query: 291 PDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHG 342
P++ TY L+ + + +++ +++ + + TY LI L G
Sbjct: 449 PNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSG 500
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 87/205 (42%), Gaps = 4/205 (1%)
Query: 365 TYNIMLNGLCKSGLLDRAISLYSTMV--SESCFPDIVTYNTLLSGLCKEGFVDEGIQ-LL 421
TYN M++ L K D L + M ES + T + ++ L K G ++ + L
Sbjct: 168 TYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFL 227
Query: 422 YLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGV 481
+ + N +D L + S+E A E++ ++ I PD T + L GFC
Sbjct: 228 EMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFD-TIKPDARTFNILIHGFCKA 286
Query: 482 DQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIY 541
+ ++A ++ M + Y + CK+ + L+ M + C P+ Y
Sbjct: 287 RKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTY 346
Query: 542 DALIKAVADSGMVKEANDLHQRLIE 566
++ ++ S V EA +++++ E
Sbjct: 347 TIVMHSLGKSKQVAEALGVYEKMKE 371
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 138/289 (47%), Gaps = 5/289 (1%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTN--LIRGLIKIGQIDKGCKIINIM 179
N +L+ LC R + AA + A+K IP F SC+ +I G K+G++++ K++ M
Sbjct: 225 NALLRCLCERSHVSAAKSVFN--AKKGNIP-FDSCSYNIMISGWSKLGEVEEMEKVLKEM 281
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
V SG PD ++ + +I GL + G + +V++ +++ G PDA YN +I +F
Sbjct: 282 VESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDF 341
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
+E++ +++ L + C P L TY+ L+ + + ALE+ E+M G P S
Sbjct: 342 DESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSF 401
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS 359
+ G ++ G + + Y L+ LS G + +V + M E+
Sbjct: 402 LKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGY 461
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGL 408
P Y +++GLC G L+ A+ + + + P+ Y+ L S L
Sbjct: 462 PSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKL 510
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 155/341 (45%), Gaps = 3/341 (0%)
Query: 218 GCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRA 277
G + D +Y+ I+R + + F+ + K + +G P L T+ ++ R RA
Sbjct: 146 GVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRA 205
Query: 278 LEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQP-NAVTYNTLIH 336
+E+ E+ G ++N+L+ ++ V + +G P ++ +YN +I
Sbjct: 206 IELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFN--AKKGNIPFDSCSYNIMIS 263
Query: 337 SLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFP 396
S G + ++ VL+ M E+ P ++Y+ ++ GL ++G ++ ++ ++ + + P
Sbjct: 264 GWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVP 323
Query: 397 DIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELY 456
D YN ++ DE ++ + C P L TY+ + GL + + A E++
Sbjct: 324 DANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIF 383
Query: 457 SEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQ 516
EM+ +G++P +S C AM + ++ K +I +AY+ ++ L +
Sbjct: 384 EEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRF 443
Query: 517 RKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
K + + D M S D ++Y+ ++ + G ++ A
Sbjct: 444 GKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENA 484
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/369 (20%), Positives = 156/369 (42%), Gaps = 5/369 (1%)
Query: 175 IINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMF 234
++ MV G PD+ + + + Y++ A++L E+ G ++N ++R +
Sbjct: 173 VLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLC 232
Query: 235 DKGNFNEAVSFWKDQLRKGCPPY-LITYTVLIELVCRYCGAIRALE-VLEDMAMEGCYPD 292
++ + + A S + +KG P+ +Y ++I + G + +E VL++M G PD
Sbjct: 233 ERSHVSAAKSVF--NAKKGNIPFDSCSYNIMISGWSK-LGEVEEMEKVLKEMVESGFGPD 289
Query: 293 IITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLE 352
++Y+ L+ + G ++ + N+ +G P+A YN +I + S +D
Sbjct: 290 CLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYR 349
Query: 353 IMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEG 412
M + P TY+ +++GL K + A+ ++ M+S P + L LC G
Sbjct: 350 RMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYG 409
Query: 413 FVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHS 472
+ + C Y + + L+R G ++ EM G D +
Sbjct: 410 PPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYE 469
Query: 473 SLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRS 532
+ G C + LE A+ +++E +K Y + L K ++A + + ++
Sbjct: 470 YIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKKA 529
Query: 533 RCKPDEKIY 541
R + + +
Sbjct: 530 RATENARSF 538
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 155/388 (39%), Gaps = 7/388 (1%)
Query: 112 PFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDK 171
P V D + + IL+ L R +++ M + P T + +++ + +
Sbjct: 145 PGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRR 204
Query: 172 GCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIR 231
++ G + N ++ LC+R ++ SA V + D+ +YN +I
Sbjct: 205 AIELFEESESFGVKCSTESFNALLRCLCERSHV-SAAKSVFNAKKGNIPFDSCSYNIMIS 263
Query: 232 GMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYP 291
G G E K+ + G P ++Y+ LIE + R ++E+ +++ +G P
Sbjct: 264 GWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVP 323
Query: 292 DIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVL 351
D YN+++ ++E+ +L +PN TY+ L+ L V D L
Sbjct: 324 DANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKG---RKVSDAL 380
Query: 352 EIMNETSSP---PTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGL 408
EI E S PT L LC G A+ +Y C Y LL L
Sbjct: 381 EIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRL 440
Query: 409 CKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDE 468
+ G + + + + + Y +DGL +G +E+A + E + KG P+
Sbjct: 441 SRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNR 500
Query: 469 ITHSSLAWGFCGVDQLEEAMELLKEMHK 496
+S L+ ++ E A +L ++ K
Sbjct: 501 FVYSRLSSKLMASNKTELAYKLFLKIKK 528
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 127/279 (45%), Gaps = 7/279 (2%)
Query: 288 GCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGV 347
G D+ +Y+ ++ ++ ++ V+ ++ G+ P+ + S Y V
Sbjct: 146 GVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHY---V 202
Query: 348 DDVLEIMNETSSPPTRVT---YNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTL 404
+E+ E+ S + + +N +L LC+ + A S+++ F D +YN +
Sbjct: 203 RRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPF-DSCSYNIM 261
Query: 405 LSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGI 464
+SG K G V+E ++L + + P ++Y+ I+GL R G + + E++ + KG
Sbjct: 262 ISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGN 321
Query: 465 VPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQ 524
VPD ++++ F +E+M + M ++ + Y ++ GL K RKV A++
Sbjct: 322 VPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALE 381
Query: 525 ALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQR 563
+ M+ P + + +K + G A ++Q+
Sbjct: 382 IFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQK 420
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 107/250 (42%), Gaps = 1/250 (0%)
Query: 323 GMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRA 382
G+ + +Y+ ++ +L + + DVL+ M P I ++ + + RA
Sbjct: 146 GVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRA 205
Query: 383 ISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDG 442
I L+ S ++N LL LC+ V + G N +YNI I G
Sbjct: 206 IELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKG-NIPFDSCSYNIMISG 264
Query: 443 LARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIK 502
+++G +E +++ EM+ G PD +++S L G ++ +++E+ + K
Sbjct: 265 WSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPD 324
Query: 503 HTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQ 562
Y +I R D +++ M+ C+P+ + Y L+ + V +A ++ +
Sbjct: 325 ANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFE 384
Query: 563 RLIEWKILKT 572
++ +L T
Sbjct: 385 EMLSRGVLPT 394
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 160/371 (43%), Gaps = 11/371 (2%)
Query: 189 ITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKD 248
I +++ LCK A ++E++ C PD + Y I GN E K
Sbjct: 224 IIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKK 283
Query: 249 QLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYP-DIITYNSLV-SFTAKQ 306
+ + G P Y I + A EV E + + G +P D ++L+ S +A
Sbjct: 284 KRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAE-VIVSGKFPMDNDILDALIGSVSAVD 342
Query: 307 GVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTY 366
+LV ++S G P T + L +L H D + E+++ +Y
Sbjct: 343 PDSAVEFLVY--MVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSY 400
Query: 367 NIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTG 426
++M++ LCK+G + + + M E PD+ YN L+ CK + +L +
Sbjct: 401 SLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFV 460
Query: 427 TNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEE 486
C L TYN+ I L+ G E + L+ +M+ +GI PDE + SL G C ++E
Sbjct: 461 EGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEA 520
Query: 487 AMELLKEMHKKDEK-IKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEK-IYDAL 544
AME+ ++ ++D K + +L LC A Q ++R R + + L
Sbjct: 521 AMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEASQ----LLREREHLEHTGAHVVL 576
Query: 545 IKAVADSGMVK 555
+K VAD+ V+
Sbjct: 577 LKCVADAKEVE 587
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 161/383 (42%), Gaps = 6/383 (1%)
Query: 186 PDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSF 245
PDV CN ++ GL G A L M G S + + + I G F + + +
Sbjct: 152 PDV--CNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYI-GWFCRSSETNQLLR 208
Query: 246 WKDQLRKGCPPY--LITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFT 303
D+++K I +++ +C+ + A +LE++ C PD + Y +
Sbjct: 209 LVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAF 268
Query: 304 AKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTR 363
G E +V+ G+ P + Y I L S +V E++ P
Sbjct: 269 VVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDN 328
Query: 364 VTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYL 423
+ ++ G + D A+ MVS P I T + L LC+ D I+ L
Sbjct: 329 DILDALI-GSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYEL 387
Query: 424 LTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQ 483
L+ L +Y++ I L + G + + EM +G+ PD +++L C +
Sbjct: 388 LSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEM 447
Query: 484 LEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDA 543
+ A +L EM + K+ T Y +I L ++ + + +++ D M+ +PDE IY +
Sbjct: 448 IRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMS 507
Query: 544 LIKAVADSGMVKEANDLHQRLIE 566
LI+ + ++ A ++ ++ +E
Sbjct: 508 LIEGLCKETKIEAAMEVFRKCME 530
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 115/257 (44%), Gaps = 12/257 (4%)
Query: 127 NLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQI-----DKGCKIINIMVM 181
+L + RL A + E++ FP +++ LI G + D + + MV
Sbjct: 302 DLISAKRLTEAKEVAEVIVSGK----FPMDNDILDALI--GSVSAVDPDSAVEFLVYMVS 355
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
+G +P + T + + LC+ + E +S G + +Y+ +I + G E
Sbjct: 356 TGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRE 415
Query: 242 AVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVS 301
+ + ++ ++G P + Y LIE C+ A ++ ++M +EGC ++ TYN L+
Sbjct: 416 SYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIR 475
Query: 302 FTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVL-EIMNETSSP 360
+++G EE+ + +L RG++P+ Y +LI L + +V + M
Sbjct: 476 KLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKT 535
Query: 361 PTRVTYNIMLNGLCKSG 377
TR + + LC +G
Sbjct: 536 VTRRVLSEFVLNLCSNG 552
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 5/185 (2%)
Query: 102 VDPGKPVKPPPFVRNDG-----FTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSC 156
VDP V+ ++ + G T +K+ +NLC + + E+++ K S
Sbjct: 341 VDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSY 400
Query: 157 TNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSL 216
+ +I L K G++ + + M G PDV N +I CK ++ A L ++M +
Sbjct: 401 SLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFV 460
Query: 217 SGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIR 276
GC + TYN +IR + ++G E++ + L +G P Y LIE +C+
Sbjct: 461 EGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEA 520
Query: 277 ALEVL 281
A+EV
Sbjct: 521 AMEVF 525
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 143/340 (42%), Gaps = 8/340 (2%)
Query: 137 AARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM-VMSGGVPDVITCNMVI 195
A+ L E+M + P T+LI K +DK + M +S PDV T ++I
Sbjct: 163 ASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLI 222
Query: 196 GGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCP 255
CK G +V +MS G +TYNTII G G F E S D + G
Sbjct: 223 SCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDG-- 280
Query: 256 PYLITYTVLIELVCRYCGAIRALEVLED----MAMEGCYPDIITYNSLVSFTAKQGVYEE 311
L L ++ Y G R + +E + G PDI T+N L+ K G+Y++
Sbjct: 281 DSLPDVCTLNSIIGSY-GNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKK 339
Query: 312 TYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLN 371
V+ + R VTYN +I + G + +DDV M P +TY ++N
Sbjct: 340 MCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVN 399
Query: 372 GLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSP 431
K+GL+ + S+ +V+ D +N +++ + G + +L + C P
Sbjct: 400 AYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKP 459
Query: 432 GLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITH 471
+T+ I G ++ +EL +MI I +T
Sbjct: 460 DKITFATMIKTYTAHGIFDAVQELEKQMISSDIGKKRLTE 499
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 158/356 (44%), Gaps = 2/356 (0%)
Query: 221 PDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEV 280
P TY + + + + ++A ++ L +G P + YT LI + + +A
Sbjct: 142 PRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFST 201
Query: 281 LEDM-AMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLS 339
LE M ++ C PD+ T+ L+S K G ++ ++ + G+ + VTYNT+I
Sbjct: 202 LEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYG 261
Query: 340 SHGYWDGVDDVL-EIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDI 398
G ++ ++ VL +++ + S P T N ++ + + S YS PDI
Sbjct: 262 KAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDI 321
Query: 399 VTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSE 458
T+N L+ K G + ++ + S VTYNI I+ + G +E +++ +
Sbjct: 322 TTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRK 381
Query: 459 MIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRK 518
M +G+ P+ IT+ SL + + + +L+++ D + + C+I +
Sbjct: 382 MKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGD 441
Query: 519 VDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKILKTEI 574
+ + M +CKPD+ + +IK G+ +L +++I I K +
Sbjct: 442 LATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMISSDIGKKRL 497
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 110/260 (42%), Gaps = 8/260 (3%)
Query: 311 ETYLVISNLLSRG--MQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNI 368
++ L I NLL + +P TY L L + D + E+M PT Y
Sbjct: 125 QSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTS 184
Query: 369 MLNGLCKSGLLDRAISLYSTMVSES-CFPDIVTYNTLLSGLCKEGFVD--EGIQLLYLLT 425
+++ KS LLD+A S M S S C PD+ T+ L+S CK G D + I L
Sbjct: 185 LISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYL 244
Query: 426 GTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKG-IVPDEITHSSLAWGFCGVDQL 484
G CS VTYN IDG + G E + + ++MI G +PD T +S+ + +
Sbjct: 245 GVGCST--VTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNM 302
Query: 485 EEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDAL 544
+ + T + +IL K +D M + Y+ +
Sbjct: 303 RKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIV 362
Query: 545 IKAVADSGMVKEANDLHQRL 564
I+ +G +++ +D+ +++
Sbjct: 363 IETFGKAGRIEKMDDVFRKM 382
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 138/321 (42%), Gaps = 13/321 (4%)
Query: 186 PDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSF 245
P++ NM++ LCK G +K L+ M PDA T+N + G + +A+
Sbjct: 232 PEINAFNMLLDALCKCGLVKEGEALLRRMR-HRVKPDANTFNVLFFGWCRVRDPKKAMKL 290
Query: 246 WKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEG---CYPDIITYNSLVSF 302
++ + G P TY I+ C+ A ++ + M +G P T+ ++
Sbjct: 291 LEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVA 350
Query: 303 TAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPT 362
AK EE + +I ++S G P+ TY +I + D L+ M+ PP
Sbjct: 351 LAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPD 410
Query: 363 RVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLY 422
VTYN L LC++ D A+ LY MV C P + TYN L+S + D
Sbjct: 411 IVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWT 470
Query: 423 LLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGI-VPDEITHSSLAWGFCGV 481
+ +C + TY I+GL + A L E++ KG+ +P + S L
Sbjct: 471 EMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLM------ 524
Query: 482 DQLEEAMELLKEMHKKDEKIK 502
+L E LK +HK E +K
Sbjct: 525 -RLSEVGN-LKAIHKVSEHMK 543
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 140/324 (43%), Gaps = 4/324 (1%)
Query: 247 KDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQ 306
+ ++R P + + +L++ +C+ CG ++ E L PD T+N L +
Sbjct: 223 RKRIRVKTQPEINAFNMLLDALCK-CGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRV 281
Query: 307 GVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIM---NETSSPPTR 363
++ ++ ++ G +P TY I + G D D+ + M S PT
Sbjct: 282 RDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTA 341
Query: 364 VTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYL 423
T+ +M+ L K+ + L M+S C PD+ TY ++ G+C VDE + L
Sbjct: 342 KTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDE 401
Query: 424 LTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQ 483
++ P +VTYN + L + A +LY M+ P T++ L F +D
Sbjct: 402 MSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDD 461
Query: 484 LEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDA 543
+ A EM K+D Y +I GL + A L+ +V K +++D+
Sbjct: 462 PDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDS 521
Query: 544 LIKAVADSGMVKEANDLHQRLIEW 567
+ +++ G +K + + + + ++
Sbjct: 522 FLMRLSEVGNLKAIHKVSEHMKKF 545
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 106/256 (41%), Gaps = 6/256 (2%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIP-HFPSCTNLIRGLIKIGQIDKG 172
V+ D T N + C A +L+E M P +F C I + G +D+
Sbjct: 264 VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCA-AIDTFCQAGMVDEA 322
Query: 173 CKIINIMVMSGGV---PDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTI 229
+ + M+ G P T ++I L K + +L+ M +GC PD TY +
Sbjct: 323 ADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDV 382
Query: 230 IRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGC 289
I GM +EA F + KG PP ++TY + ++C AL++ M C
Sbjct: 383 IEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRC 442
Query: 290 YPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSL-SSHGYWDGVD 348
P + TYN L+S + + + + + R + TY +I+ L H +
Sbjct: 443 APSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACF 502
Query: 349 DVLEIMNETSSPPTRV 364
+ E++N+ P RV
Sbjct: 503 LLEEVVNKGLKLPYRV 518
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 104/255 (40%), Gaps = 4/255 (1%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N +L LC G + L+ M + + P + L G ++ K K++ M+
Sbjct: 238 NMLLDALCKCGLVKEGEALLRRMRHRVK-PDANTFNVLFFGWCRVRDPKKAMKLLEEMIE 296
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCS---PDAITYNTIIRGMFDKGN 238
+G P+ T I C+ G + A DL + M G + P A T+ +I +
Sbjct: 297 AGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDK 356
Query: 239 FNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNS 298
E + GC P + TY +IE +C A + L++M+ +G PDI+TYN
Sbjct: 357 AEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNC 416
Query: 299 LVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETS 358
+ + +E + ++ P+ TYN LI DG + M++
Sbjct: 417 FLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRD 476
Query: 359 SPPTRVTYNIMLNGL 373
TY M+NGL
Sbjct: 477 CVQDVETYCAMINGL 491
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/421 (21%), Positives = 170/421 (40%), Gaps = 81/421 (19%)
Query: 158 NLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLS 217
N I LI+ +++ V S P + T N V+ ++ + + L ++ +
Sbjct: 100 NHILKLIRENDLEEAALYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQA 159
Query: 218 GCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKG-CPPYLITYTVLIELVCRYCGAIR 276
G +P+ ITYN I + D A+ +K + P + T+ +L++ + +
Sbjct: 160 GIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEK 219
Query: 277 ALEVLEDMAMEGCYPDIITYNSL----VSFTAKQGV---YEETYLVISNLLSRGM----- 324
A+E+ EDMA++G D + Y+ L V + GV Y+E + + G+
Sbjct: 220 AMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQL 279
Query: 325 ---------------------------QPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNET 357
+ +A+ YN ++ +LS +G +D + + + +
Sbjct: 280 MKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKE 339
Query: 358 SSPPTRV-----TYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLC--- 409
+PP + T+N+M+NG C G + A+ ++ M C PD +++N L++ LC
Sbjct: 340 HNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNE 399
Query: 410 --------------------------------KEGFVDEGIQLLYLLTGTNCSPGLVTYN 437
KEG +DEG + +N P L YN
Sbjct: 400 LLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYN 459
Query: 438 IAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKK 497
D L + G ++ AK + M+ K + DE + + +L+E ++++ EM
Sbjct: 460 RLQDQLIKAGKLDDAKSFFDMMVSKLKMDDE-AYKFIMRALSEAGRLDEMLKIVDEMLDD 518
Query: 498 D 498
D
Sbjct: 519 D 519
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 128/300 (42%), Gaps = 20/300 (6%)
Query: 289 CYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHS-LSSHGYWDGV 347
C P I T N++++ +Q Y + + G+ PN +TYN + + L +
Sbjct: 126 CRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIAL 185
Query: 348 DDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSG 407
+ ++ P+ T+ I++ GL + L++A+ + M + D V Y+ L+ G
Sbjct: 186 EHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMG 245
Query: 408 LCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLAR---MGSME-SAKELYSEMIGKG 463
K D G+ LY G V + L + M ME A E Y E +G+
Sbjct: 246 CVKNSDAD-GVLKLYQELKEKLG-GFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGEN 303
Query: 464 IVPDEITHSSLAWGFC-----GVDQLEEAMELLKEMHKKDEKIKHTA-----YRCVILGL 513
++ S++A+ + + +EA++L + K+ +H A + ++ G
Sbjct: 304 ---SKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGY 360
Query: 514 CKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKILKTE 573
C K + A++ M +C PD ++ L+ + D+ ++ EA L+ + E + E
Sbjct: 361 CAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDE 420
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/356 (20%), Positives = 141/356 (39%), Gaps = 21/356 (5%)
Query: 226 YNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYC--GAIRALEVLED 283
+N I++ + + + EA + + + C P + T ++ R GA+ L +
Sbjct: 99 HNHILK-LIRENDLEEAALYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHGFIN 157
Query: 284 MAMEGCYPDIITYN----SLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLS 339
A G P+IITYN + + + E L I N + P+ T+ L+ L
Sbjct: 158 QA--GIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNA---PLNPSIATFRILVKGLV 212
Query: 340 SHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSE--SCFPD 397
S+ + ++ E M V Y+ ++ G K+ D + LY + + D
Sbjct: 213 SNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDD 272
Query: 398 IVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGL--VTYNIAIDGLARMGSMESAKEL 455
V Y L+ G + E ++ G N + + YN ++ L+ G + A +L
Sbjct: 273 GVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKL 332
Query: 456 YSEMIGKGIVPDEI-----THSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVI 510
+ + + P + T + + G+C + EEAME+ ++M ++ ++
Sbjct: 333 FDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLM 392
Query: 511 LGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
LC + A + M KPDE Y L+ G + E ++ ++E
Sbjct: 393 NQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVE 448
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/212 (19%), Positives = 85/212 (40%), Gaps = 6/212 (2%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIP-----HFPSCTNLIRGLIKIGQ 168
VR N +L+ L G+ A +L + + ++ P + + ++ G G+
Sbjct: 306 VRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGK 365
Query: 169 IDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNT 228
++ ++ M PD ++ N ++ LC L A L +M PD TY
Sbjct: 366 FEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGL 425
Query: 229 IIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEG 288
++ F +G +E +++K + P L Y L + + + G + + DM +
Sbjct: 426 LMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIK-AGKLDDAKSFFDMMVSK 484
Query: 289 CYPDIITYNSLVSFTAKQGVYEETYLVISNLL 320
D Y ++ ++ G +E ++ +L
Sbjct: 485 LKMDDEAYKFIMRALSEAGRLDEMLKIVDEML 516
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 82/139 (58%)
Query: 361 PTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQL 420
PT +TYN M++G CK +D A + +M S+ C PD+VT++TL++G CK VD G+++
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 421 LYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCG 480
+ VTY I G ++G +++A++L +EMI G+ PD IT + G C
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 481 VDQLEEAMELLKEMHKKDE 499
+L +A +L+++ K ++
Sbjct: 128 KKELRKAFAILEDLQKSED 146
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 84/145 (57%)
Query: 389 MVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGS 448
M+ S FP +TYN+++ G CK+ VD+ ++L + CSP +VT++ I+G +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 449 MESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRC 508
+++ E++ EM +GIV + +T+++L GFC V L+ A +LL EM + + C
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 509 VILGLCKQRKVDIAIQALDLMVRSR 533
++ GLC ++++ A L+ + +S
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQKSE 145
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 67/136 (49%)
Query: 250 LRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVY 309
LR P ITY +I+ C+ A +L+ MA +GC PD++T+++L++ K
Sbjct: 2 LRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRV 61
Query: 310 EETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIM 369
+ + + RG+ N VTY TLIH G D D+L M P +T++ M
Sbjct: 62 DNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCM 121
Query: 370 LNGLCKSGLLDRAISL 385
L GLC L +A ++
Sbjct: 122 LAGLCSKKELRKAFAI 137
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 75/137 (54%), Gaps = 10/137 (7%)
Query: 290 YPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDG--V 347
+P ITYNS++ KQ ++ ++ ++ S+G P+ VT++TLI +GY V
Sbjct: 7 FPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLI-----NGYCKAKRV 61
Query: 348 DDVLEI---MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTL 404
D+ +EI M+ VTY +++G C+ G LD A L + M+S PD +T++ +
Sbjct: 62 DNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCM 121
Query: 405 LSGLCKEGFVDEGIQLL 421
L+GLC + + + +L
Sbjct: 122 LAGLCSKKELRKAFAIL 138
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T N ++ C + R+ A R+++ MA K P + + LI G K ++D G +I M
Sbjct: 12 TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 71
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
G V + +T +I G C+ G L +A DL+ +M G +PD IT++ ++ G+ K
Sbjct: 72 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKEL 131
Query: 240 NEAVSFWKD 248
+A + +D
Sbjct: 132 RKAFAILED 140
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%)
Query: 431 PGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMEL 490
P +TYN IDG + ++ AK + M KG PD +T S+L G+C +++ ME+
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 491 LKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVAD 550
EMH++ Y +I G C+ +D A L+ M+ PD + ++ +
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 551 SGMVKEA 557
+++A
Sbjct: 128 KKELRKA 134
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 68/134 (50%)
Query: 186 PDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSF 245
P IT N +I G CK+ + A +++ M+ GCSPD +T++T+I G + +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 246 WKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAK 305
+ + R+G +TYT LI C+ A ++L +M G PD IT++ +++
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 306 QGVYEETYLVISNL 319
+ + + ++ +L
Sbjct: 128 KKELRKAFAILEDL 141
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 64/141 (45%)
Query: 319 LLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGL 378
+L + P +TYN++I D +L+ M P VT++ ++NG CK+
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 379 LDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNI 438
+D + ++ M + VTY TL+ G C+ G +D LL + +P +T++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 439 AIDGLARMGSMESAKELYSEM 459
+ GL + A + ++
Sbjct: 121 MLAGLCSKKELRKAFAILEDL 141
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 68/141 (48%)
Query: 144 MARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGY 203
M R S P + ++I G K ++D ++++ M G PDV+T + +I G CK
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 204 LKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTV 263
+ + +++ +M G + +TY T+I G G+ + A + + G P IT+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 264 LIELVCRYCGAIRALEVLEDM 284
++ +C +A +LED+
Sbjct: 121 MLAGLCSKKELRKAFAILEDL 141
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 60/120 (50%)
Query: 221 PDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEV 280
P ITYN++I G + ++A KGC P ++T++ LI C+ +E+
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 281 LEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSS 340
+M G + +TY +L+ + G + +++ ++S G+ P+ +T++ ++ L S
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 50/101 (49%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T + ++ C R+ + M R+ + + + T LI G ++G +D ++
Sbjct: 44 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 103
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLS 217
N M+ G PD IT + ++ GLC + L+ A ++ED+ S
Sbjct: 104 NEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKS 144
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 136/312 (43%), Gaps = 1/312 (0%)
Query: 260 TYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNL 319
T+ +I+++ A +L DM +G D + L+ K G+ +E+ + +
Sbjct: 152 THMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKM 211
Query: 320 LSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLL 379
G++ +YN+L + G + M PTR TYN+ML G S L
Sbjct: 212 KDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRL 271
Query: 380 DRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIA 439
+ A+ + M + PD T+NT+++G C+ +DE +L + G P +V+Y
Sbjct: 272 ETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTM 331
Query: 440 IDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDE 499
I G + ++ ++ EM GI P+ T+S+L G C ++ EA +LK M K
Sbjct: 332 IKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHI 391
Query: 500 KIK-HTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEAN 558
K ++ + +++ K + A + L M + Y LI+ + A
Sbjct: 392 APKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAI 451
Query: 559 DLHQRLIEWKIL 570
L LIE +I+
Sbjct: 452 KLLDTLIEKEII 463
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 101/457 (22%), Positives = 189/457 (41%), Gaps = 14/457 (3%)
Query: 113 FVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKG 172
+R+D T+ K+++ L +L A ++ M K LI K G + +
Sbjct: 145 LIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQES 204
Query: 173 CKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRG 232
KI M G + + N + + +RG A M G P TYN ++ G
Sbjct: 205 VKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWG 264
Query: 233 MFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPD 292
F A+ F++D +G P T+ +I CR+ A ++ +M P
Sbjct: 265 FFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPS 324
Query: 293 IITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLE 352
+++Y +++ ++ + + S G++PNA TY+TL+ L G ++L+
Sbjct: 325 VVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILK 384
Query: 353 -IMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKE 411
+M + +P + +L K+G + A + M + + + Y L+ CK
Sbjct: 385 NMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKA 444
Query: 412 GFVDEGIQLLYLLTGTNC----------SPGLVTYNIAIDGLARMGSMESAKELYSEMIG 461
+ I+LL L P YN I+ L G A+ L+ +++
Sbjct: 445 SAYNRAIKLLDTLIEKEIILRHQDTLEMEPS--AYNPIIEYLCNNGQTAKAEVLFRQLMK 502
Query: 462 KGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDI 521
+G V D+ ++L G + + E+LK M ++ + AY +I + +
Sbjct: 503 RG-VQDQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGD 561
Query: 522 AIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEAN 558
A ALD MV PD ++ ++I+++ + G V+ A+
Sbjct: 562 AKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTAS 598
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 101/463 (21%), Positives = 195/463 (42%), Gaps = 20/463 (4%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T N ++ C ++ A +L M P S T +I+G + + ++D G +I
Sbjct: 289 DDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIF 348
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSP-DAITYNTIIRGMFD 235
M SG P+ T + ++ GLC G + A +++++M +P D + ++
Sbjct: 349 EEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSK 408
Query: 236 KGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCR---YCGAIRALEVLEDMAMEGCYPD 292
G+ A K P Y VLIE C+ Y AI+ L+ L + + + D
Sbjct: 409 AGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQD 468
Query: 293 II-----TYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGV 347
+ YN ++ + G + ++ L+ RG+Q + N LI + G D
Sbjct: 469 TLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSS 527
Query: 348 DDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSG 407
++L+IM+ P Y +++ G A + +MV + PD + +++
Sbjct: 528 YEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIES 587
Query: 408 LCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPD 467
L ++G V +++ ++ N V +D +A++ + E +G+ + +
Sbjct: 588 LFEDGRVQTASRVMMIMIDKN-----VGIEDNMDLIAKILEALLMRGHVEEALGRIDLLN 642
Query: 468 EITHS----SLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAI 523
+ H+ SL + A++LL ++D ++ ++Y V+ L K A
Sbjct: 643 QNGHTADLDSLLSVLSEKGKTIAALKLLDFGLERDLSLEFSSYDKVLDALLGAGKTLNAY 702
Query: 524 QALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
L ++ D K D LIK++ G K+A D+ R+I+
Sbjct: 703 SVLCKIMEKGSSTDWKSSDELIKSLNQEGNTKQA-DVLSRMIK 744
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/439 (21%), Positives = 185/439 (42%), Gaps = 31/439 (7%)
Query: 158 NLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDM-SL 216
N ++ LI+ +D K+ V S P V TCN +I + + ++ L +
Sbjct: 150 NRVQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQ 209
Query: 217 SGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGC-PPYLITYTVLIELVCRYCGAI 275
S P+ ++YN II D+GN +EA+ ++ L P +TY L + + +
Sbjct: 210 SNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIG 269
Query: 276 RALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLI 335
A +L +M +G D YN+L+ G +++ L S+ Y+ ++
Sbjct: 270 DAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSK-----CTVYDGIV 324
Query: 336 HSLSSHGYWDGVDDVLEIMNETSS---------PPTRVTYNIMLNGLCKSGLLDRAISLY 386
++ YW + E M S PPT N++L K G D A +L+
Sbjct: 325 NATFME-YWFEKGNDKEAMESYRSLLDKKFRMHPPTG---NVLLEVFLKFGKKDEAWALF 380
Query: 387 STMVSESCFPDIVTYNTLLSGLC-----KEGFVDEGIQLLYLL-TGTNCSPGLVTY---- 436
+ M+ P+I++ N+ G+ K G E I + + P ++ Y
Sbjct: 381 NEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYC 440
Query: 437 NIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHK 496
NI + G + A+ ++E + + + D +H ++ + +++++A+++L M
Sbjct: 441 NI-VTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVD 499
Query: 497 KDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKE 556
+ ++ V L K K+ + + L M KPD IYD +++ + D + +
Sbjct: 500 VNLRVVADFGARVFGELIKNGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDGDALDQ 559
Query: 557 ANDLHQRLIEWKILKTEII 575
A D+ +I + T ++
Sbjct: 560 AKDIVGEMIRHNVGVTTVL 578
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 95/451 (21%), Positives = 188/451 (41%), Gaps = 50/451 (11%)
Query: 119 FTNNKILQNLCTRGRLMAAARLIEIMARKSQI-PHFPSCTNLIRGLIKIGQIDKGCKII- 176
FT N I+ + R + L + ++S I P+ S +I G +D+ ++
Sbjct: 181 FTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYR 240
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
+I+ + P +T + GL + G + A L+ +M G + D+ YN +IRG D
Sbjct: 241 HILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDL 300
Query: 237 GNFNEAVSFWKDQLRKGCPPYL-ITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIIT 295
G+F++AV F+ D+L+ C Y I +E A+E + + T
Sbjct: 301 GDFDKAVEFF-DELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPT 359
Query: 296 YNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNT-----LIHSLSSHG-YWDGVDD 349
N L+ K G +E + + + +L PN ++ N+ +++ G + + ++
Sbjct: 360 GNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINT 419
Query: 350 VLEIMNETSSPPTRVTY----NIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLL 405
++ ++ +S P + Y NI+ C+ G+L A ++ VS S D ++ ++
Sbjct: 420 FKKVGSKVTSKPFVMDYLGYCNIVTR-FCEQGMLTEAERFFAEGVSRSLPADAPSHRAMI 478
Query: 406 SGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIV 465
K +D+ +++L + N + D AR ++ E+I G
Sbjct: 479 DAYLKAERIDDAVKMLDRMVDVNL-------RVVADFGAR---------VFGELIKNG-- 520
Query: 466 PDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQA 525
+L E+ E+L +M +++ K + Y V+ GLC +D A
Sbjct: 521 -----------------KLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDGDALDQAKDI 563
Query: 526 LDLMVRSRCKPDEKIYDALIKAVADSGMVKE 556
+ M+R + + +I+ +G +E
Sbjct: 564 VGEMIRHNVGVTTVLREFIIEVFEKAGRREE 594
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 90/439 (20%), Positives = 174/439 (39%), Gaps = 54/439 (12%)
Query: 122 NKILQNLCTRGRLMAAARLI-EIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMV 180
N+I+ C G + A + I+A P + +L +GL++ G+I ++ M+
Sbjct: 220 NQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREML 279
Query: 181 MSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFN 240
G D N +I G G AV+ +++ D I T + F+KGN
Sbjct: 280 SKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDK 339
Query: 241 EAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNS-- 298
EA+ ++ L K + T VL+E+ ++ A + +M P+I++ NS
Sbjct: 340 EAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDT 399
Query: 299 ---LVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMN 355
+V+ K G + E + S+ VT + D L N
Sbjct: 400 VGIMVNECFKMGEFSEAINTFKKVGSK------VTSKPFVM------------DYLGYCN 441
Query: 356 ETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVD 415
++ C+ G+L A ++ VS S D ++ ++ K +D
Sbjct: 442 -------------IVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERID 488
Query: 416 EGIQLLYLLTGTNCSPGLVTYNIAIDG-LARMGSMESAKELYSEMIGKGIVPDEITHSSL 474
+ +++L + N + + + G L + G + + E+ ++M + PD + +
Sbjct: 489 DAVKMLDRMVDVNLR-VVADFGARVFGELIKNGKLTESAEVLTKMGEREPKPDPSIYDVV 547
Query: 475 AWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRC 534
G C D L++A +++ EM I+H +L R+ I + R
Sbjct: 548 VRGLCDGDALDQAKDIVGEM------IRHNVGVTTVL-----REFIIEV----FEKAGRR 592
Query: 535 KPDEKIYDALIKAVADSGM 553
+ EKI +++ + V ++G
Sbjct: 593 EEIEKILNSVARPVRNAGQ 611
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 154/382 (40%), Gaps = 37/382 (9%)
Query: 116 NDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKI 175
+D T N ++ L + ++E M K + + T ++ + K I
Sbjct: 193 HDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGI 251
Query: 176 INIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFD 235
+M V T N ++ L R L ++ D +P+ +TY ++ G
Sbjct: 252 FELMKKYKFKIGVETINCLLDSL-GRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCR 310
Query: 236 KGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIIT 295
N EA W D + +G P ++ + V++E + R A+++ M +G P++ +
Sbjct: 311 VRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRS 370
Query: 296 YNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMN 355
Y ++ KQ E +++ G+QP+A Y LI + D V ++L+ M
Sbjct: 371 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQ 430
Query: 356 ETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVD 415
E PP TYN ++ + + + A +Y+ M+ P I T+N ++
Sbjct: 431 EKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMK--------- 481
Query: 416 EGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLA 475
+Y +A + E + ++ EMI KGI PD+ +++ L
Sbjct: 482 -------------------SYFMA-------RNYEMGRAVWEEMIKKGICPDDNSYTVLI 515
Query: 476 WGFCGVDQLEEAMELLKEMHKK 497
G G + EA L+EM K
Sbjct: 516 RGLIGEGKSREACRYLEEMLDK 537
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 147/313 (46%), Gaps = 4/313 (1%)
Query: 259 ITYTVLIELVCRYCGAIRALEVLEDMAME--GCYPDIITYNSLVSFTAKQGVYEETYLVI 316
+++ +++E++ R+ A + A E G D TYNS++S AK +E V+
Sbjct: 159 LSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVL 218
Query: 317 SNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKS 376
+ ++G+ T+ + + ++ + E+M + T N +L+ L ++
Sbjct: 219 EEMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRA 277
Query: 377 GLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTY 436
L A L+ + E P+++TY LL+G C+ + E ++ + P +V +
Sbjct: 278 KLGKEAQVLFDKL-KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAH 336
Query: 437 NIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHK 496
N+ ++GL R A +L+ M KG P+ +++ + FC +E A+E +M
Sbjct: 337 NVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVD 396
Query: 497 KDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKE 556
+ Y C+I G Q+K+D + L M PD K Y+ALIK +A+ M +
Sbjct: 397 SGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEH 456
Query: 557 ANDLHQRLIEWKI 569
A ++ ++I+ +I
Sbjct: 457 ATRIYNKMIQNEI 469
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 118/271 (43%)
Query: 185 VPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVS 244
P+++T +++ G C+ L A + DM G PD + +N ++ G+ ++A+
Sbjct: 295 TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIK 354
Query: 245 FWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTA 304
+ KG P + +YT++I C+ A+E +DM G PD Y L++
Sbjct: 355 LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFG 414
Query: 305 KQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRV 364
Q + Y ++ + +G P+ TYN LI +++ + + M + P+
Sbjct: 415 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIH 474
Query: 365 TYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLL 424
T+N+++ + + +++ M+ + PD +Y L+ GL EG E + L +
Sbjct: 475 TFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEM 534
Query: 425 TGTNCSPGLVTYNIAIDGLARMGSMESAKEL 455
L+ YN R G E +EL
Sbjct: 535 LDKGMKTPLIDYNKFAADFHRGGQPEIFEEL 565
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 154/364 (42%), Gaps = 15/364 (4%)
Query: 218 GCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRA 277
G + D+ TYN+++ + F VS ++ KG + T+T+ ++ +A
Sbjct: 190 GFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKA 248
Query: 278 LEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHS 337
+ + E M + T N L+ + + +E ++ L R PN +TY L++
Sbjct: 249 VGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNG 307
Query: 338 LSSHGYWDGVDDVLEI------MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVS 391
W V +++E M + P V +N+ML GL +S AI L+ M S
Sbjct: 308 ------WCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKS 361
Query: 392 ESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMES 451
+ P++ +Y ++ CK+ ++ I+ + + P Y I G +++
Sbjct: 362 KGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDT 421
Query: 452 AKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVIL 511
EL EM KG PD T+++L E A + +M + + + + ++
Sbjct: 422 VYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMK 481
Query: 512 GLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKILK 571
R ++ + M++ PD+ Y LI+ + G +EA + +++ K +K
Sbjct: 482 SYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLD-KGMK 540
Query: 572 TEII 575
T +I
Sbjct: 541 TPLI 544
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 142/348 (40%), Gaps = 2/348 (0%)
Query: 183 GGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEA 242
G D T N ++ L K ++ V ++E+M G T+ ++ +A
Sbjct: 190 GFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKA 248
Query: 243 VSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSF 302
V ++ + + T L++ + R A +VL D E P+++TY L++
Sbjct: 249 VGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEA-QVLFDKLKERFTPNMMTYTVLLNG 307
Query: 303 TAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPT 362
+ E + ++++ +G++P+ V +N ++ L + +M P
Sbjct: 308 WCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPN 367
Query: 363 RVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLY 422
+Y IM+ CK ++ AI + MV PD Y L++G + +D +LL
Sbjct: 368 VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLK 427
Query: 423 LLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVD 482
+ P TYN I +A E A +Y++MI I P T + + +
Sbjct: 428 EMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMAR 487
Query: 483 QLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMV 530
E + +EM KK +Y +I GL + K A + L+ M+
Sbjct: 488 NYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEML 535
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 106/245 (43%), Gaps = 12/245 (4%)
Query: 100 ELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNL 159
+++D G +KP D +N +L+ L + A +L +M K P+ S T +
Sbjct: 323 DMIDQG--LKP------DIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIM 374
Query: 160 IRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGC 219
IR K ++ + + MV SG PD +I G + L + +L+++M G
Sbjct: 375 IRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH 434
Query: 220 SPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIE--LVCRYCGAIRA 277
PD TYN +I+ M ++ A + ++ P + T+ ++++ + R RA
Sbjct: 435 PPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRA 494
Query: 278 LEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHS 337
V E+M +G PD +Y L+ +G E + +L +GM+ + YN
Sbjct: 495 --VWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAAD 552
Query: 338 LSSHG 342
G
Sbjct: 553 FHRGG 557
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 141/342 (41%), Gaps = 12/342 (3%)
Query: 140 LIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLC 199
L+E M ++ + + R K ++K K+ + M+ G PD T +I
Sbjct: 165 LLETMKPSREVILYNVTMKVFR---KSKDLEKSEKLFDEMLERGIKPDNATFTTIISCAR 221
Query: 200 KRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLI 259
+ G K AV+ E MS GC PD +T +I GN + A+S + + +
Sbjct: 222 QNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAV 281
Query: 260 TYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNL 319
T++ LI + L + E+M G P+++ YN L+ + + ++ +L
Sbjct: 282 TFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDL 341
Query: 320 LSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLL 379
++ G PN TY L+ + Y D + M E T + YN +L+ + +
Sbjct: 342 ITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYV 401
Query: 380 DRAISLYSTMVS-ESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNI 438
D A ++ M + E+C PD T+++L++ G V E L + P L
Sbjct: 402 DEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTS 461
Query: 439 AIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCG 480
I + ++ + +++ GI PD+ FCG
Sbjct: 462 VIQCYGKAKQVDDVVRTFDQVLELGITPDD--------RFCG 495
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 120/267 (44%), Gaps = 1/267 (0%)
Query: 292 DIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVL 351
++I YN + K E++ + +L RG++P+ T+ T+I +G +
Sbjct: 174 EVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWF 233
Query: 352 EIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKE 411
E M+ P VT M++ ++G +D A+SLY +E D VT++TL+
Sbjct: 234 EKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVS 293
Query: 412 GFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITH 471
G D + + + P LV YN ID + R AK +Y ++I G P+ T+
Sbjct: 294 GNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTY 353
Query: 472 SSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQAL-DLMV 530
++L + ++A+ + +EM +K + Y ++ R VD A + D+
Sbjct: 354 AALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKN 413
Query: 531 RSRCKPDEKIYDALIKAVADSGMVKEA 557
C PD + +LI A SG V EA
Sbjct: 414 CETCDPDSWTFSSLITVYACSGRVSEA 440
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/436 (20%), Positives = 175/436 (40%), Gaps = 37/436 (8%)
Query: 142 EIMARKSQI---PHFPSCTNLIR--------GLIKIGQIDKGCKIINIMVMSGGVPDVIT 190
E A KS + P P + L R LIK+ + CK P+
Sbjct: 80 EPTASKSYVWVNPKSPRASQLRRKSYDSRYSSLIKLAESLDACK-----------PNEAD 128
Query: 191 CNMVIGGLCKRGYLKSAVDLVEDMSLSGCSP--------------DAITYNTIIRGMFDK 236
VI G + + + AV + +M+ +P + I YN ++
Sbjct: 129 VCDVITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNVTMKVFRKS 188
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
+ ++ + + L +G P T+T +I + RA+E E M+ GC PD +T
Sbjct: 189 KDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTM 248
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
+++ + G + + + + +AVT++TLI G +DG ++ E M
Sbjct: 249 AAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKA 308
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDE 416
P V YN +++ + ++ +A +Y +++ P+ TY L+ + + D+
Sbjct: 309 LGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDD 368
Query: 417 GIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIG-KGIVPDEITHSSLA 475
+ + + S ++ YN + A ++ A E++ +M + PD T SSL
Sbjct: 369 ALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLI 428
Query: 476 WGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCK 535
+ ++ EA L +M + + VI K ++VD ++ D ++
Sbjct: 429 TVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGIT 488
Query: 536 PDEKIYDALIKAVADS 551
PD++ L+ + +
Sbjct: 489 PDDRFCGCLLNVMTQT 504
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/437 (19%), Positives = 192/437 (43%), Gaps = 16/437 (3%)
Query: 123 KILQNLCTRGRLMAAARLIE-IMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
K+LQ +C+ A R I + R + C +LI + G+++ K+ N M
Sbjct: 94 KLLQ-VCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSM-- 150
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
++ + N ++ K GY+ A+ L+++M + G PD +T+N+++ G KG +
Sbjct: 151 --KDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKD 208
Query: 242 AVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEG-CYPDIITYNSLV 300
A++ K G P + + L++ V G ++ + + + + D+ +L+
Sbjct: 209 AIAVLKRMQIAGLKPSTSSISSLLQAVAE-PGHLKLGKAIHGYILRNQLWYDVYVETTLI 267
Query: 301 SFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSP 360
K G +V + ++ N V +N+L+ LS + ++ M +
Sbjct: 268 DMYIKTGYLPYARMVFDMMDAK----NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIK 323
Query: 361 PTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQL 420
P +T+N + +G G ++A+ + M + P++V++ + SG K G +++
Sbjct: 324 PDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKV 383
Query: 421 LYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCG 480
+ P T + + L + + S KE++ + K ++ D ++L +
Sbjct: 384 FIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGK 443
Query: 481 VDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKI 540
L+ A+E+ + K ++ C+++G + + I A +M+ + +PD
Sbjct: 444 SGDLQSAIEIFWGIKNKS----LASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAIT 499
Query: 541 YDALIKAVADSGMVKEA 557
+ +++ +SG+V+E
Sbjct: 500 FTSVLSVCKNSGLVQEG 516
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 95/445 (21%), Positives = 179/445 (40%), Gaps = 88/445 (19%)
Query: 152 HFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLV 211
+ S +++ K+G +D +++ M + G PD++T N ++ G +G K A+ ++
Sbjct: 154 NLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVL 213
Query: 212 EDMSLSGCSPDAITYNTIIRGMFDKGNFN--EAV-------SFWKD----------QLRK 252
+ M ++G P + +++++ + + G+ +A+ W D ++
Sbjct: 214 KRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKT 273
Query: 253 GCPPY------------LITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLV 300
G PY ++ + L+ + C A ++ M EG PD IT+NSL
Sbjct: 274 GYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLA 333
Query: 301 SFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSP 360
S A G E+ VI + +G+ PN V++ + S +G + V M E
Sbjct: 334 SGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVG 393
Query: 361 PTRVTYNIML---------------NGLC--------------------KSGLLDRAISL 385
P T + +L +G C KSG L AI +
Sbjct: 394 PNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEI 453
Query: 386 YSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLAR 445
+ + ++S + ++N +L G G +EGI ++ P +T+ +
Sbjct: 454 FWGIKNKS----LASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKN 509
Query: 446 MGSMESAKELYSEMIGK-GIVPDEITHSSLAWGFCGVD------QLEEAMELLKEMHKKD 498
G ++ + + M + GI+P I H S C VD L+EA + ++ M K
Sbjct: 510 SGLVQEGWKYFDLMRSRYGIIP-TIEHCS-----CMVDLLGRSGYLDEAWDFIQTMSLKP 563
Query: 499 EKIKHTAYRCVILGLCK-QRKVDIA 522
+ A+ L CK R +++A
Sbjct: 564 DATIWGAF----LSSCKIHRDLELA 584
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/375 (20%), Positives = 160/375 (42%), Gaps = 8/375 (2%)
Query: 187 DVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFW 246
D + N ++ + G + AV+L +M SG T +++ +K F E
Sbjct: 53 DDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIH 112
Query: 247 KDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQ 306
LR G + LI + R + +V M ++ ++NS++S K
Sbjct: 113 GYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDR----NLSSWNSILSSYTKL 168
Query: 307 GVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTY 366
G ++ ++ + G++P+ VT+N+L+ +S G VL+ M P+ +
Sbjct: 169 GYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSI 228
Query: 367 NIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTG 426
+ +L + + G L +++ ++ + D+ TL+ K G++ + ++
Sbjct: 229 SSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDA 288
Query: 427 TNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEE 486
N +V +N + GL+ ++ A+ L M +GI PD IT +SLA G+ + + E+
Sbjct: 289 KN----IVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEK 344
Query: 487 AMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIK 546
A++++ +M +K ++ + G K A++ M P+ L+K
Sbjct: 345 ALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLK 404
Query: 547 AVADSGMVKEANDLH 561
+ ++ ++H
Sbjct: 405 ILGCLSLLHSGKEVH 419
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 123/292 (42%), Gaps = 13/292 (4%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N ++ L L A L+ M ++ P + +L G +G+ +K +I M
Sbjct: 295 NSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKE 354
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
G P+V++ + G K G ++A+ + M G P+A T +T+++ + +
Sbjct: 355 KGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHS 414
Query: 242 AVSFWKDQLRKG--CPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
LRK C Y+ T L+++ + A+E+ + + + ++N +
Sbjct: 415 GKEVHGFCLRKNLICDAYVA--TALVDMYGKSGDLQSAIEIFWGIKNK----SLASWNCM 468
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS 359
+ A G EE S +L GM+P+A+T+ +++ + G ++M
Sbjct: 469 LMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYG 528
Query: 360 -PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCK 410
PT + M++ L +SG LD A TM S PD + LS CK
Sbjct: 529 IIPTIEHCSCMVDLLGRSGYLDEAWDFIQTM---SLKPDATIWGAFLSS-CK 576
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 126/271 (46%), Gaps = 3/271 (1%)
Query: 278 LEVLEDMAMEGCYPDIITYNSLVS--FTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLI 335
+++ + M +G PD++TYN+L++ K G Y + +I L G+Q ++V Y T++
Sbjct: 186 IKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNG-YPKAIELIGELPHNGIQMDSVMYGTVL 244
Query: 336 HSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCF 395
+S+G + ++ ++ M P Y+ +LN G +A L + M S
Sbjct: 245 AICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLV 304
Query: 396 PDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKEL 455
P+ V TLL K G D +LL L + + Y + +DGL++ G +E A+ +
Sbjct: 305 PNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSI 364
Query: 456 YSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCK 515
+ +M GKG+ D +S + C + +EA EL ++ EK ++ C+
Sbjct: 365 FDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCR 424
Query: 516 QRKVDIAIQALDLMVRSRCKPDEKIYDALIK 546
+++ ++ + M PD + LIK
Sbjct: 425 AGEMESVMRMMKKMDEQAVSPDYNTFHILIK 455
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 139/320 (43%), Gaps = 1/320 (0%)
Query: 227 NTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITY-TVLIELVCRYCGAIRALEVLEDMA 285
N+I+ + G + + + R G P ++TY T+L + G +A+E++ ++
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELP 229
Query: 286 MEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWD 345
G D + Y ++++ A G EE I + G PN Y++L++S S G +
Sbjct: 230 HNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYK 289
Query: 346 GVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLL 405
D+++ M P +V +L K GL DR+ L S + S + + Y L+
Sbjct: 290 KADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLM 349
Query: 406 SGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIV 465
GL K G ++E + + G +I I L R + AKEL +
Sbjct: 350 DGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEK 409
Query: 466 PDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQA 525
D + +++ +C ++E M ++K+M ++ + + +I K++ +A Q
Sbjct: 410 CDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQT 469
Query: 526 LDLMVRSRCKPDEKIYDALI 545
M + +E++ +LI
Sbjct: 470 TLDMHSKGHRLEEELCSSLI 489
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 157/395 (39%), Gaps = 52/395 (13%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N IL L G+L + +L + M R P + L+ G IK+
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKV--------------- 214
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
K GY K A++L+ ++ +G D++ Y T++ G E
Sbjct: 215 ------------------KNGYPK-AIELIGELPHNGIQMDSVMYGTVLAICASNGRSEE 255
Query: 242 AVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVS 301
A +F + +G P + Y+ L+ +A E++ +M G P+ + +L+
Sbjct: 256 AENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLK 315
Query: 302 FTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPP 361
K G+++ + ++S L S G N + Y L+ LS G + + + M
Sbjct: 316 VYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRS 375
Query: 362 TRVTYNIMLNGLCKSGLLDRA--ISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQ 419
+IM++ LC+S A +S S E C D+V NT+L C+ G ++ ++
Sbjct: 376 DGYANSIMISALCRSKRFKEAKELSRDSETTYEKC--DLVMLNTMLCAYCRAGEMESVMR 433
Query: 420 LLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFC 479
++ + SP T++I I + A + +M KG +E SSL +
Sbjct: 434 MMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLIYHLG 493
Query: 480 GVDQLEEAMELL-----------KEMHKKDEKIKH 503
+ EA + KE+H EKI H
Sbjct: 494 KIRAQAEAFSVYNMLRYSKRTICKELH---EKILH 525
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 119/299 (39%), Gaps = 21/299 (7%)
Query: 280 VLEDMAMEGCYPDII---------------TYNSLVSFTAKQGVYE--ETYLVISNLLSR 322
+L D + G + D+I TY+S + F + V + E Y I +
Sbjct: 104 ILRDFGISGRWQDLIQLFEWMQQHGKISVSTYSSCIKFVGAKNVSKALEIYQSIPD---E 160
Query: 323 GMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCK-SGLLDR 381
+ N N+++ L +G D + + M P VTYN +L G K +
Sbjct: 161 STKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPK 220
Query: 382 AISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAID 441
AI L + D V Y T+L+ G +E + + SP + Y+ ++
Sbjct: 221 AIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLN 280
Query: 442 GLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKI 501
+ G + A EL +EM G+VP+++ ++L + + + ELL E+
Sbjct: 281 SYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAE 340
Query: 502 KHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDL 560
Y ++ GL K K++ A D M + D +I A+ S KEA +L
Sbjct: 341 NEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKEL 399
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 94/220 (42%)
Query: 119 FTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINI 178
+ + +L + +G A L+ M +P+ T L++ IK G D+ ++++
Sbjct: 273 YHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSE 332
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN 238
+ +G + + M++ GL K G L+ A + +DM G D + +I +
Sbjct: 333 LESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKR 392
Query: 239 FNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNS 298
F EA +D L+ ++ CR + +++ M + PD T++
Sbjct: 393 FKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHI 452
Query: 299 LVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSL 338
L+ + K+ ++ Y ++ S+G + ++LI+ L
Sbjct: 453 LIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLIYHL 492
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 130/294 (44%), Gaps = 9/294 (3%)
Query: 204 LKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTV 263
+K A+ M G ++ +N ++ + N +A + +K P + +YT+
Sbjct: 178 VKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTI 237
Query: 264 LIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRG 323
L+E + +R EV +M EG PD++ Y +++ K YEE + + R
Sbjct: 238 LLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRN 297
Query: 324 MQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS---PPTRVTYNIMLNGLCKSGLLD 380
+P+ + +LI+ L S ++D LE + S P TYN ++ C S ++
Sbjct: 298 CKPSPHIFCSLINGLGSE---KKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRME 354
Query: 381 RAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAI 440
A M + P+ TY+ +L L + E ++ ++ C P + TY I +
Sbjct: 355 DAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMS---CEPTVSTYEIMV 411
Query: 441 DGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEM 494
++ A +++ EM GKG++P SSL C ++L+EA E EM
Sbjct: 412 RMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEM 465
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 125/316 (39%), Gaps = 50/316 (15%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRG------LIKIGQIDKGCKI 175
N++L L + A ++ + M +K P S T L+ G L+++ ++++ K
Sbjct: 201 NRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKD 260
Query: 176 INIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFD 235
G PDV+ ++I CK + A+ +M C P + ++I G+
Sbjct: 261 ------EGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGS 314
Query: 236 KGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIIT 295
+ N+A+ F++ G P TY LV YC + R +ED
Sbjct: 315 EKKLNDALEFFERSKSSGFPLEAPTYNA---LVGAYCWSQR----MED------------ 355
Query: 296 YNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMN 355
Y + + +G+ PNA TY+ ++H L + E+
Sbjct: 356 ----------------AYKTVDEMRLKGVGPNARTYDIILHHLIRM---QRSKEAYEVYQ 396
Query: 356 ETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVD 415
S PT TY IM+ C LD AI ++ M + P + +++L++ LC E +D
Sbjct: 397 TMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLD 456
Query: 416 EGIQLLYLLTGTNCSP 431
E + + P
Sbjct: 457 EACEYFNEMLDVGIRP 472
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 104/260 (40%), Gaps = 20/260 (7%)
Query: 304 AKQGVYEETYLVISNLLSR-----------------GMQPNAVTYNTLIHSLSSHGYWDG 346
AK+ + +ET+ +IS +R G + + +N ++ +LS
Sbjct: 156 AKKLLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGD 215
Query: 347 VDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLS 406
V + M + P +Y I+L G + L R + M E PD+V Y +++
Sbjct: 216 AQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIIN 275
Query: 407 GLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVP 466
CK +E I+ + NC P + I+GL + A E + G
Sbjct: 276 AHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPL 335
Query: 467 DEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQAL 526
+ T+++L +C ++E+A + + EM K Y ++ L + ++ A +
Sbjct: 336 EAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVY 395
Query: 527 DLMVRSRCKPDEKIYDALIK 546
M C+P Y+ +++
Sbjct: 396 QTM---SCEPTVSTYEIMVR 412
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 101/240 (42%), Gaps = 9/240 (3%)
Query: 322 RGMQPNAVTYNTLIHSLSS----HGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSG 377
+G + YN LI SL W VDD+ + ++ T+ ++ ++
Sbjct: 122 KGFKHTTSNYNALIESLGKIKQFKLIWSLVDDM-----KAKKLLSKETFALISRRYARAR 176
Query: 378 LLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYN 437
+ AI + M + +N +L L K V + ++ + P + +Y
Sbjct: 177 KVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYT 236
Query: 438 IAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKK 497
I ++G + ++ E+ EM +G PD + + + C + EEA+ EM ++
Sbjct: 237 ILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQR 296
Query: 498 DEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
+ K + +I GL ++K++ A++ + S + Y+AL+ A S +++A
Sbjct: 297 NCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDA 356
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 94/204 (46%)
Query: 317 SNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKS 376
S++ P+ TYN+LIH L G V + + + P TY I++ G CKS
Sbjct: 278 SSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKS 337
Query: 377 GLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTY 436
+D A+ +Y M PD + YN LL G K V E QL + TY
Sbjct: 338 YRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTY 397
Query: 437 NIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHK 496
NI IDGL R G E+ L+ ++ KG D IT S + C +LE A++L++EM
Sbjct: 398 NILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMET 457
Query: 497 KDEKIKHTAYRCVILGLCKQRKVD 520
+ + +++G KQ + D
Sbjct: 458 RGFSVDLVTISSLLIGFHKQGRWD 481
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 171/419 (40%), Gaps = 51/419 (12%)
Query: 117 DGFTNNKILQNLCTRGRLMA-----AARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDK 171
+GF + I+ N G L A A +L E M ++ + LI GL + G+ +
Sbjct: 353 NGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEA 412
Query: 172 GCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIR 231
G + + G D IT ++V LC+ G L+ AV LVE+M G S D +T ++++
Sbjct: 413 GFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLI 472
Query: 232 GMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRAL------------- 278
G +G ++ WK++L K I L+ V R+ + A
Sbjct: 473 GFHKQGRWD-----WKEKLMKH-----IREGNLVPNVLRWNAGVEASLKRPQSKDKDYTP 522
Query: 279 ------EVLEDMAMEGCYPDIITYNSLV---------SFTAKQGVYEETYLVISNLLSRG 323
L+ M+M G D + + S Q ++ L+RG
Sbjct: 523 MFPSKGSFLDIMSMVGSEDDGASAEEVSPMEDDPWSSSPYMDQLAHQRNQPKPLFGLARG 582
Query: 324 M----QPNAV---TYNTLIHSLSSHGYWDGVDDVLEIMNETS-SPPTRVTYNIMLNGLCK 375
+P++ NT + S G + EI N + T TYN M++ K
Sbjct: 583 QRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVK 642
Query: 376 SGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVT 435
G A + M C DI TYN ++ GL K G D +L LT +V
Sbjct: 643 KGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVM 702
Query: 436 YNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEM 494
YN I+ L + ++ A +L+ M GI PD ++++++ +L+EA + LK M
Sbjct: 703 YNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAM 761
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 129/280 (46%), Gaps = 8/280 (2%)
Query: 187 DVITCNMVIGGLCKRGYLKSAVDLVEDM----SLSGCS--PDAITYNTIIRGMFDKGNFN 240
D + N+ I G G L +A+ L ++M S+ G S PD TYN++I + G
Sbjct: 247 DTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAK 306
Query: 241 EAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLV 300
+A+ W + G P TY +LI+ C+ A+ + +M G PD I YN L+
Sbjct: 307 DALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLL 366
Query: 301 SFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSP 360
T K E + ++ G++ + TYN LI L +G + + + +
Sbjct: 367 DGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQF 426
Query: 361 PTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQL 420
+T++I+ LC+ G L+ A+ L M + D+VT ++LL G K+G D +L
Sbjct: 427 VDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKL 486
Query: 421 LYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMI 460
+ + N P ++ +N ++ A + +S + Y+ M
Sbjct: 487 MKHIREGNLVPNVLRWNAGVE--ASLKRPQSKDKDYTPMF 524
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 151/363 (41%), Gaps = 15/363 (4%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T + + LC G+L A +L+E M + + ++L+ G K G+ D K++
Sbjct: 428 DAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLM 487
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIR--GMF 234
+ VP+V+ N + KR K D + P ++ I+ G
Sbjct: 488 KHIREGNLVPNVLRWNAGVEASLKRPQSK-------DKDYTPMFPSKGSFLDIMSMVGSE 540
Query: 235 DKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDII 294
D G E VS +D PY+ G R V A + D+
Sbjct: 541 DDGASAEEVSPMEDD-PWSSSPYMDQLAHQRNQPKPLFGLARGQRV---EAKPDSF-DVD 595
Query: 295 TYNSLVSFTAKQGVYEETYLVISNLLSRGMQP-NAVTYNTLIHSLSSHGYWDGVDDVLEI 353
N+ +S +G + G+ + TYN+++ S GY+ VL+
Sbjct: 596 MMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQ 655
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
M E TYN+++ GL K G D A ++ + + + DIV YNTL++ L K
Sbjct: 656 MFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATR 715
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSS 473
+DE QL + +P +V+YN I+ ++ G ++ A + M+ G +P+ +T +
Sbjct: 716 LDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVTDTI 775
Query: 474 LAW 476
L +
Sbjct: 776 LDY 778
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 114/257 (44%), Gaps = 6/257 (2%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQI------PHFPSCTNLIRGLIKIGQID 170
D ++ N + G L AA L + M +S + P + +LI L G+
Sbjct: 247 DTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAK 306
Query: 171 KGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTII 230
+ + + +SG PD T ++I G CK + A+ + +M +G PD I YN ++
Sbjct: 307 DALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLL 366
Query: 231 RGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCY 290
G EA ++ +++G TY +LI+ + R A + D+ +G +
Sbjct: 367 DGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQF 426
Query: 291 PDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDV 350
D IT++ + ++G E ++ + +RG + VT ++L+ G WD + +
Sbjct: 427 VDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKL 486
Query: 351 LEIMNETSSPPTRVTYN 367
++ + E + P + +N
Sbjct: 487 MKHIREGNLVPNVLRWN 503
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 131/292 (44%), Gaps = 11/292 (3%)
Query: 185 VPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSP---DAITYNTIIRGMFDKGNFNE 241
+P + N ++ GL +R ++S V + L G D +YN I G G+ +
Sbjct: 209 LPGTVAVNELLVGL-RRADMRSEFKRVFE-KLKGMKRFKFDTWSYNICIHGFGCWGDLDA 266
Query: 242 AVSFWKDQLRKGC------PPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIIT 295
A+S +K+ + P + TY LI ++C + A AL V +++ + G PD T
Sbjct: 267 ALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNST 326
Query: 296 YNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMN 355
Y L+ K ++ + + G P+ + YN L+ + E M
Sbjct: 327 YRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMV 386
Query: 356 ETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVD 415
+ + TYNI+++GL ++G + +L+ + + F D +T++ + LC+EG ++
Sbjct: 387 QEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLE 446
Query: 416 EGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPD 467
++L+ + S LVT + + G + G + ++L + +VP+
Sbjct: 447 GAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPN 498
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 148/357 (41%), Gaps = 28/357 (7%)
Query: 198 LCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSF--WKDQLRKGCP 255
+C+ G L DL+ M G + D ++ + G F A+ + ++L
Sbjct: 102 VCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLN 161
Query: 256 PYLITYTVLIELVCRY------CGAIRALEVLEDMAMEGC--------YPDIITYNSLVS 301
P + +VLI LV ++ + LE ++ + + P + N L+
Sbjct: 162 PSVYD-SVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLV 220
Query: 302 FTAKQGVYEETYLVISNLLSRGMQP---NAVTYNTLIHSLSSHGYWDGVDDVLEIMNETS 358
+ + E V L +GM+ + +YN IH G D + + M E S
Sbjct: 221 GLRRADMRSEFKRVFEKL--KGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERS 278
Query: 359 S------PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEG 412
S P TYN +++ LC G A+ ++ + PD TY L+ G CK
Sbjct: 279 SVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSY 338
Query: 413 FVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHS 472
+D+ +++ + P + YN +DG + + A +L+ +M+ +G+ T++
Sbjct: 339 RMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYN 398
Query: 473 SLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLM 529
L G + E L ++ KK + + + V L LC++ K++ A++ ++ M
Sbjct: 399 ILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEM 455
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 90/443 (20%), Positives = 174/443 (39%), Gaps = 13/443 (2%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T ++Q C R+ A R+ M +P L+ G +K ++ + C++
Sbjct: 323 DNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLF 382
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
MV G T N++I GL + G ++ L D+ G DAIT++ + + +
Sbjct: 383 EKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCRE 442
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEG-CYPDIIT 295
G AV ++ +G L+T + L+ + G E L EG P+++
Sbjct: 443 GKLEGAVKLVEEMETRGFSVDLVTISSLL-IGFHKQGRWDWKEKLMKHIREGNLVPNVLR 501
Query: 296 YNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMN 355
+N+ V + K+ ++ + P + + + +S G D E+
Sbjct: 502 WNAGVEASLKRPQSKD----------KDYTPMFPSKGSFLDIMSMVGSEDDGASAEEVSP 551
Query: 356 ETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVD 415
P + Y L ++ + ++ D+ NT LS +G +
Sbjct: 552 MEDDPWSSSPYMDQLAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLS 611
Query: 416 EGIQLLYLLTGTNCSP-GLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSL 474
+L + G + TYN + + G ++A+ + +M D T++ +
Sbjct: 612 LACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVI 671
Query: 475 AWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRC 534
G + + + A +L + K+ + Y +I L K ++D A Q D M +
Sbjct: 672 IQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGI 731
Query: 535 KPDEKIYDALIKAVADSGMVKEA 557
PD Y+ +I+ + +G +KEA
Sbjct: 732 NPDVVSYNTMIEVNSKAGKLKEA 754
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 120/294 (40%), Gaps = 22/294 (7%)
Query: 295 TYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIM 354
Y+ + + G+ E ++ ++ G+ + L+ SL G ++ VL+ M
Sbjct: 94 AYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYM 153
Query: 355 NETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSES---------------CFPDIV 399
E Y+ +L L K L A+S+ ++ S P V
Sbjct: 154 EELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTV 213
Query: 400 TYNTLLSGLCKEGFVDEGIQLLYLLTGTN-CSPGLVTYNIAIDGLARMGSMESAKELYSE 458
N LL GL + E ++ L G +YNI I G G +++A L+ E
Sbjct: 214 AVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKE 273
Query: 459 M------IGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILG 512
M G PD T++SL C + ++A+ + E+ + ++ YR +I G
Sbjct: 274 MKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQG 333
Query: 513 LCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
CK ++D A++ M + PD +Y+ L+ + V EA L +++++
Sbjct: 334 CCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQ 387
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 125/329 (37%), Gaps = 22/329 (6%)
Query: 246 WKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAK 305
W LR G Y+ + VCR ++L M +G D L+ +
Sbjct: 80 WCYSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIR 139
Query: 306 QGVYEETYLVISNLLSRGMQPNAVTYNT-LIHSLSSHGYWDGVDDVLEIMNET------- 357
G +E V+ + G N Y++ LI + H + + +++ +
Sbjct: 140 SGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDD 199
Query: 358 -------SSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFP-DIVTYNTLLSGLC 409
S P V N +L GL ++ + ++ + F D +YN + G
Sbjct: 200 TGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFG 259
Query: 410 KEGFVDEGIQLLYLLT------GTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKG 463
G +D + L + G++ P + TYN I L G + A ++ E+ G
Sbjct: 260 CWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSG 319
Query: 464 IVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAI 523
PD T+ L G C ++++AM + EM Y C++ G K RKV A
Sbjct: 320 HEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEAC 379
Query: 524 QALDLMVRSRCKPDEKIYDALIKAVADSG 552
Q + MV+ + Y+ LI + +G
Sbjct: 380 QLFEKMVQEGVRASCWTYNILIDGLFRNG 408
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 84/187 (44%), Gaps = 4/187 (2%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCT--NLIRGLIKIGQIDKGCKIINIM 179
N L ++G L A +L EI + S T +++ +K G +++ M
Sbjct: 598 NTFLSIYLSKGDLSLACKLFEIF-NGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQM 656
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
+ D+ T N++I GL K G A +++ ++ G D + YNT+I +
Sbjct: 657 FENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRL 716
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
+EA + G P +++Y +IE+ + A + L+ M GC P+ +T +++
Sbjct: 717 DEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT-DTI 775
Query: 300 VSFTAKQ 306
+ + K+
Sbjct: 776 LDYLGKE 782
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 63/139 (45%)
Query: 400 TYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEM 459
TYN+++S K+G+ +L + C+ + TYN+ I GL +MG + A + +
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 460 IGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKV 519
+G D + +++L +L+EA +L M +Y +I K K+
Sbjct: 692 TKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKL 751
Query: 520 DIAIQALDLMVRSRCKPDE 538
A + L M+ + C P+
Sbjct: 752 KEAYKYLKAMLDAGCLPNH 770
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 144/363 (39%), Gaps = 2/363 (0%)
Query: 116 NDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKI 175
+D T N ++ L + ++E M K + + T ++ + K I
Sbjct: 192 HDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGI 250
Query: 176 INIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFD 235
+M V T N ++ L R L ++ D +P+ +TY ++ G
Sbjct: 251 FELMKKYKFKIGVETINCLLDSL-GRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCR 309
Query: 236 KGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIIT 295
N EA W D + G P ++ + V++E + R A+++ M +G P++ +
Sbjct: 310 VRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRS 369
Query: 296 YNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMN 355
Y ++ KQ E +++ G+QP+A Y LI + D V ++L+ M
Sbjct: 370 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQ 429
Query: 356 ETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVD 415
E PP TYN ++ + + + +Y+ M+ P I T+N ++ +
Sbjct: 430 EKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYE 489
Query: 416 EGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLA 475
G + + P +Y + I GL G A EM+ KG+ I ++ A
Sbjct: 490 MGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFA 549
Query: 476 WGF 478
F
Sbjct: 550 ADF 552
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 146/313 (46%), Gaps = 4/313 (1%)
Query: 259 ITYTVLIELVCRYCGAIRALEVLEDMAME--GCYPDIITYNSLVSFTAKQGVYEETYLVI 316
+++ +++E++ R+ A + A E G D TYNS++S AK +E V+
Sbjct: 158 LSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVL 217
Query: 317 SNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKS 376
+ ++G+ T+ + + ++ + E+M + T N +L+ L ++
Sbjct: 218 EEMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRA 276
Query: 377 GLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTY 436
L A L+ + E P+++TY LL+G C+ + E ++ + P +V +
Sbjct: 277 KLGKEAQVLFDKL-KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAH 335
Query: 437 NIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHK 496
N+ ++GL R A +L+ M KG P+ +++ + FC +E A+E +M
Sbjct: 336 NVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVD 395
Query: 497 KDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKE 556
+ Y C+I G Q+K+D + L M PD K Y+ALIK +A+ M +
Sbjct: 396 SGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEH 455
Query: 557 ANDLHQRLIEWKI 569
++ ++I+ +I
Sbjct: 456 GTRIYNKMIQNEI 468
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 118/271 (43%)
Query: 185 VPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVS 244
P+++T +++ G C+ L A + DM G PD + +N ++ G+ ++A+
Sbjct: 294 TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIK 353
Query: 245 FWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTA 304
+ KG P + +YT++I C+ A+E +DM G PD Y L++
Sbjct: 354 LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFG 413
Query: 305 KQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRV 364
Q + Y ++ + +G P+ TYN LI +++ + + M + P+
Sbjct: 414 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIH 473
Query: 365 TYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLL 424
T+N+++ + + +++ M+ + PD +Y L+ GL EG E + L +
Sbjct: 474 TFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEM 533
Query: 425 TGTNCSPGLVTYNIAIDGLARMGSMESAKEL 455
L+ YN R G E +EL
Sbjct: 534 LDKGMKTPLIDYNKFAADFHRGGQPEIFEEL 564
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 107/250 (42%)
Query: 248 DQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQG 307
D+L++ P ++TYTVL+ CR I A + DM G PDI+ +N ++ +
Sbjct: 287 DKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSM 346
Query: 308 VYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYN 367
+ + + S+G PN +Y +I + + + M ++ P Y
Sbjct: 347 KKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYT 406
Query: 368 IMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGT 427
++ G LD L M + PD TYN L+ + + + G ++ +
Sbjct: 407 CLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQN 466
Query: 428 NCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEA 487
P + T+N+ + + E + ++ EMI KGI PD+ +++ L G + EA
Sbjct: 467 EIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREA 526
Query: 488 MELLKEMHKK 497
L+EM K
Sbjct: 527 CRYLEEMLDK 536
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 153/364 (42%), Gaps = 15/364 (4%)
Query: 218 GCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRA 277
G + D+ TYN+++ + F VS ++ KG + T+T+ ++ +A
Sbjct: 189 GFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKA 247
Query: 278 LEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHS 337
+ + E M + T N L+ + + +E ++ L R PN +TY L++
Sbjct: 248 VGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNG 306
Query: 338 LSSHGYWDGVDDVLEI------MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVS 391
W V +++E M + P V +N+ML GL +S AI L+ M S
Sbjct: 307 ------WCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKS 360
Query: 392 ESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMES 451
+ P++ +Y ++ CK+ ++ I+ + + P Y I G +++
Sbjct: 361 KGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDT 420
Query: 452 AKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVIL 511
EL EM KG PD T+++L E + +M + + + + ++
Sbjct: 421 VYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMK 480
Query: 512 GLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKILK 571
R ++ D M++ PD+ Y LI+ + G +EA + +++ K +K
Sbjct: 481 SYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLD-KGMK 539
Query: 572 TEII 575
T +I
Sbjct: 540 TPLI 543
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 139/348 (39%), Gaps = 2/348 (0%)
Query: 183 GGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEA 242
G D T N ++ L K ++ V ++E+M G T+ ++ +A
Sbjct: 189 GFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKA 247
Query: 243 VSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSF 302
V ++ + + T L++ + R A +VL D E P+++TY L++
Sbjct: 248 VGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEA-QVLFDKLKERFTPNMMTYTVLLNG 306
Query: 303 TAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPT 362
+ E + ++++ G++P+ V +N ++ L + +M P
Sbjct: 307 WCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPN 366
Query: 363 RVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLY 422
+Y IM+ CK ++ AI + MV PD Y L++G + +D +LL
Sbjct: 367 VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLK 426
Query: 423 LLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVD 482
+ P TYN I +A E +Y++MI I P T + + +
Sbjct: 427 EMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVAR 486
Query: 483 QLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMV 530
E + EM KK +Y +I GL + K A + L+ M+
Sbjct: 487 NYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEML 534
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 99/231 (42%), Gaps = 4/231 (1%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
++ D +N +L+ L + A +L +M K P+ S T +IR K ++
Sbjct: 328 LKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAI 387
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
+ + MV SG PD +I G + L + +L+++M G PD TYN +I+ M
Sbjct: 388 EYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLM 447
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIE--LVCRYCGAIRALEVLEDMAMEGCYP 291
++ + ++ P + T+ ++++ V R RA V ++M +G P
Sbjct: 448 ANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRA--VWDEMIKKGICP 505
Query: 292 DIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHG 342
D +Y L+ +G E + +L +GM+ + YN G
Sbjct: 506 DDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGG 556
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 144/322 (44%), Gaps = 6/322 (1%)
Query: 245 FWKDQLRKGCPPYLITYTVLI-ELVCRYCGAIRALEVLEDMAME-GCYPDIITYN---SL 299
F ++ +K C + + E R A + E +E++ E YP++ +
Sbjct: 53 FITEKFKKACQAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARI 112
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVL-EIMNETS 358
++ + G++E V + R + A+++N L+++ + +D V+ + E+ + S
Sbjct: 113 INLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLS 172
Query: 359 SPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGI 418
P +YN ++ GLC G A++L + ++ PD +T+N LL +G +EG
Sbjct: 173 IEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGE 232
Query: 419 QLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGF 478
Q+ + N + +YN + GLA E L+ ++ G + PD T +++ GF
Sbjct: 233 QIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGF 292
Query: 479 CGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDE 538
+L+EA+ KE+ K + + ++ +CK ++ A + + R DE
Sbjct: 293 VSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDE 352
Query: 539 KIYDALIKAVADSGMVKEANDL 560
+ ++ A+ EA ++
Sbjct: 353 AVLQEVVDALVKGSKQDEAEEI 374
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 116/259 (44%), Gaps = 13/259 (5%)
Query: 277 ALEVLEDMAMEGCYPDIITYNSLVS-------FTAKQGVYEETYLVISNLLSRGMQPNAV 329
A +V ++M C +++N+L++ F +G+++E +S ++P+
Sbjct: 125 AQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLS------IEPDVA 178
Query: 330 TYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTM 389
+YNTLI L G + +++ + P +T+NI+L+ G + +++ M
Sbjct: 179 SYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARM 238
Query: 390 VSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSM 449
V ++ DI +YN L GL E +E + L L G P + T+ I G G +
Sbjct: 239 VEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKL 298
Query: 450 ESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCV 509
+ A Y E+ G P + +SL C LE A EL KE+ K + + V
Sbjct: 299 DEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEV 358
Query: 510 ILGLCKQRKVDIAIQALDL 528
+ L K K D A + ++L
Sbjct: 359 VDALVKGSKQDEAEEIVEL 377
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 116/264 (43%), Gaps = 12/264 (4%)
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAME-----GCYP 291
G F A + + + C +++ L+ C + +++E + E P
Sbjct: 120 GMFENAQKVFDEMPERNCKRTALSFNALLNA----CVNSKKFDLVEGIFKELPGKLSIEP 175
Query: 292 DIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVL 351
D+ +YN+L+ +G + E +I + ++G++P+ +T+N L+H + G ++ + +
Sbjct: 176 DVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIW 235
Query: 352 EIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKE 411
M E + +YN L GL + +SL+ + PD+ T+ ++ G E
Sbjct: 236 ARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSE 295
Query: 412 GFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITH 471
G +DE I + C P +N + + + G +ESA EL E+ K ++ DE
Sbjct: 296 GKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVL 355
Query: 472 SSLAWGFC---GVDQLEEAMELLK 492
+ D+ EE +EL K
Sbjct: 356 QEVVDALVKGSKQDEAEEIVELAK 379
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 115/235 (48%), Gaps = 1/235 (0%)
Query: 342 GYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSE-SCFPDIVT 400
G ++ V + M E + T +++N +LN S D ++ + + S PD+ +
Sbjct: 120 GMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVAS 179
Query: 401 YNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMI 460
YNTL+ GLC +G E + L+ + P +T+NI + G E +++++ M+
Sbjct: 180 YNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMV 239
Query: 461 GKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVD 520
K + D ++++ G ++ EE + L ++ + K + +I G + K+D
Sbjct: 240 EKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLD 299
Query: 521 IAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKILKTEII 575
AI + ++ C+P + ++++L+ A+ +G ++ A +L + + ++L E +
Sbjct: 300 EAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAV 354
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 83/192 (43%), Gaps = 14/192 (7%)
Query: 104 PGKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGL 163
PGK P D + N +++ LC +G A LI+ + K P + L+
Sbjct: 168 PGKLSIEP-----DVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHES 222
Query: 164 IKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDA 223
G+ ++G +I MV D+ + N + GL + V L + + + PD
Sbjct: 223 YTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDV 282
Query: 224 ITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCR---------YCGA 274
T+ +I+G +G +EA++++K+ + GC P + L+ +C+ C
Sbjct: 283 FTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKE 342
Query: 275 IRALEVLEDMAM 286
I A +L D A+
Sbjct: 343 IFAKRLLVDEAV 354
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 89/213 (41%), Gaps = 2/213 (0%)
Query: 142 EIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKR 201
E+ + S P S LI+GL G + +I+ + G PD IT N+++ +
Sbjct: 166 ELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTK 225
Query: 202 GYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLR-KGCPPYLIT 260
G + + M D +YN + G+ + E VS + D+L+ P + T
Sbjct: 226 GKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLF-DKLKGNELKPDVFT 284
Query: 261 YTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLL 320
+T +I+ A+ +++ GC P +NSL+ K G E Y + +
Sbjct: 285 FTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIF 344
Query: 321 SRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
++ + + ++ +L D ++++E+
Sbjct: 345 AKRLLVDEAVLQEVVDALVKGSKQDEAEEIVEL 377
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 105/238 (44%), Gaps = 3/238 (1%)
Query: 159 LIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSG 218
++RG K+G K + M G D+ + ++ + +CK G AV L ++M
Sbjct: 195 ILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRR 254
Query: 219 CSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRAL 278
D + YNT+IR + + +++ +GC P + T+ +I+L+C A
Sbjct: 255 MKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAY 314
Query: 279 EVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSL 338
+L++M GC PD ITY L S K E + ++ G++P TY L+
Sbjct: 315 RMLDEMPKRGCQPDSITYMCLFSRLEKPS---EILSLFGRMIRSGVRPKMDTYVMLMRKF 371
Query: 339 SSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFP 396
G+ V V + M E+ P YN +++ L + G+LD A M+ P
Sbjct: 372 ERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 131/277 (47%), Gaps = 8/277 (2%)
Query: 194 VIGGLCKRGYLKSAVDLVEDMSLSG---CSPDAITYNTIIRGMFDKGNFNEAVSFWKDQL 250
++ LC+ ++ A +L ++ G + +N I+RG G + + +WK
Sbjct: 157 LVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMD 216
Query: 251 RKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLV-SFTAKQGVY 309
+G L +Y++ ++++C+ +A+++ ++M D++ YN+++ + A QGV
Sbjct: 217 TEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGV- 275
Query: 310 EETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIM 369
E V + RG +PN T+NT+I L G +L+ M + P +TY +
Sbjct: 276 EFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCL 335
Query: 370 LNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNC 429
+ L K + +SL+ M+ P + TY L+ + GF+ + + + +
Sbjct: 336 FSRLEKPSEI---LSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGD 392
Query: 430 SPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVP 466
+P YN ID L + G ++ A+E EMI +G+ P
Sbjct: 393 TPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 127/295 (43%), Gaps = 8/295 (2%)
Query: 274 AIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVI-SNLLSRGMQ-PNAVTY 331
AI A + L+D + + YN + + + V E L N++ G N +
Sbjct: 136 AIDAYDKLDDFNLRD---ETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIH 192
Query: 332 NTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVS 391
N ++ S G+W + + M+ +Y+I ++ +CKSG +A+ LY M S
Sbjct: 193 NLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKS 252
Query: 392 ESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMES 451
D+V YNT++ + V+ GI++ + C P + T+N I L G M
Sbjct: 253 RRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRD 312
Query: 452 AKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVIL 511
A + EM +G PD IT+ L F +++ E + L M + + K Y ++
Sbjct: 313 AYRMLDEMPKRGCQPDSITYMCL---FSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMR 369
Query: 512 GLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
+ + + M S PD Y+A+I A+ GM+ A + + +IE
Sbjct: 370 KFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIE 424
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 97/213 (45%), Gaps = 3/213 (1%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
V D F+ + + +C G+ A +L + M + + +IR + ++ G
Sbjct: 220 VTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGI 279
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
++ M G P+V T N +I LC+ G ++ A ++++M GC PD+ITY + +
Sbjct: 280 RVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRL 339
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
+E +S + +R G P + TY +L+ R+ L V + M G PD
Sbjct: 340 ---EKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDS 396
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQP 326
YN+++ ++G+ + ++ RG+ P
Sbjct: 397 AAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 109/240 (45%), Gaps = 7/240 (2%)
Query: 323 GMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIM-NETSSPPTRVTYNIMLNGLCKSGLLDR 381
G + T+N +I L + ++ ++ M T S P VT+ I+ + L+
Sbjct: 76 GFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRYVTAHLVQE 135
Query: 382 AISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLY----LLTGTNCSPGLVTYN 437
AI Y + + D ++ L+ LC+ V E +L + + G + S + +N
Sbjct: 136 AIDAYDKL-DDFNLRDETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKI-HN 193
Query: 438 IAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKK 497
+ + G +++G KE + +M +G+ D ++S C + +A++L KEM +
Sbjct: 194 LILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSR 253
Query: 498 DEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
K+ AY VI + + V+ I+ M C+P+ ++ +IK + + G +++A
Sbjct: 254 RMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDA 313
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 118/271 (43%)
Query: 185 VPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVS 244
P+++T +++ G C+ L A + DM G PD + +N ++ G+ ++A+
Sbjct: 295 TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIK 354
Query: 245 FWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTA 304
+ KG P + +YT++I C+ A+E +DM G PD Y L++
Sbjct: 355 LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFG 414
Query: 305 KQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRV 364
Q + Y ++ + +G P+ TYN LI +++ + + M + P+
Sbjct: 415 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIH 474
Query: 365 TYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLL 424
T+N+++ + + +++ M+ + PD +Y L+ GL EG E + L +
Sbjct: 475 TFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEM 534
Query: 425 TGTNCSPGLVTYNIAIDGLARMGSMESAKEL 455
L+ YN R G E +EL
Sbjct: 535 LDKGMKTPLIDYNKFAADFHRGGQPEIFEEL 565
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/390 (21%), Positives = 152/390 (38%), Gaps = 13/390 (3%)
Query: 100 ELVDPGKPVKPPPF------VRNDGF-----TNNKILQNLCTRGRLMAAARLIEIMARKS 148
E+++ + + P F GF T N ++ L + ++E M K
Sbjct: 166 EVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKG 225
Query: 149 QIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAV 208
+ + T ++ + K I +M V T N ++ L R L
Sbjct: 226 LLT-METFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSL-GRAKLGKEA 283
Query: 209 DLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELV 268
++ D +P+ +TY ++ G N EA W D + G P ++ + V++E +
Sbjct: 284 QVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGL 343
Query: 269 CRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNA 328
R A+++ M +G P++ +Y ++ KQ E +++ G+QP+A
Sbjct: 344 LRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA 403
Query: 329 VTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYST 388
Y LI + D V ++L+ M E PP TYN ++ + + + +Y+
Sbjct: 404 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNK 463
Query: 389 MVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGS 448
M+ P I T+N ++ + G + + P +Y + I GL G
Sbjct: 464 MIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGK 523
Query: 449 MESAKELYSEMIGKGIVPDEITHSSLAWGF 478
A EM+ KG+ I ++ A F
Sbjct: 524 SREACRYLEEMLDKGMKTPLIDYNKFAADF 553
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 129/275 (46%), Gaps = 2/275 (0%)
Query: 295 TYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIM 354
TYNS++S AK +E V+ + ++G+ T+ + + ++ + E+M
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIFELM 255
Query: 355 NETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFV 414
+ T N +L+ L ++ L A L+ + E P+++TY LL+G C+ +
Sbjct: 256 KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLLNGWCRVRNL 314
Query: 415 DEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSL 474
E ++ + P +V +N+ ++GL R A +L+ M KG P+ +++ +
Sbjct: 315 IEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIM 374
Query: 475 AWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRC 534
FC +E A+E +M + Y C+I G Q+K+D + L M
Sbjct: 375 IRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH 434
Query: 535 KPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKI 569
PD K Y+ALIK +A+ M + ++ ++I+ +I
Sbjct: 435 PPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEI 469
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 138/303 (45%), Gaps = 14/303 (4%)
Query: 251 RKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQ---- 306
R+G TY ++ ++ + + VLE+M +G ++ +F A +
Sbjct: 188 RQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKK 247
Query: 307 --GVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRV 364
G++E L+ G++ T N L+ SL + + + E +P +
Sbjct: 248 AVGIFE---LMKKYKFKIGVE----TINCLLDSLGRAKLGKEAQVLFDKLKERFTP-NMM 299
Query: 365 TYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLL 424
TY ++LNG C+ L A +++ M+ PDIV +N +L GL + + I+L +++
Sbjct: 300 TYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVM 359
Query: 425 TGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQL 484
P + +Y I I + SME+A E + +M+ G+ PD ++ L GF +L
Sbjct: 360 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 419
Query: 485 EEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDAL 544
+ ELLKEM +K Y +I + Q+ + + + M+++ +P ++ +
Sbjct: 420 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMI 479
Query: 545 IKA 547
+K+
Sbjct: 480 MKS 482
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 107/250 (42%)
Query: 248 DQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQG 307
D+L++ P ++TYTVL+ CR I A + DM G PDI+ +N ++ +
Sbjct: 288 DKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSM 347
Query: 308 VYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYN 367
+ + + S+G PN +Y +I + + + M ++ P Y
Sbjct: 348 KKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYT 407
Query: 368 IMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGT 427
++ G LD L M + PD TYN L+ + + + G ++ +
Sbjct: 408 CLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQN 467
Query: 428 NCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEA 487
P + T+N+ + + E + ++ EMI KGI PD+ +++ L G + EA
Sbjct: 468 EIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREA 527
Query: 488 MELLKEMHKK 497
L+EM K
Sbjct: 528 CRYLEEMLDK 537
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 152/364 (41%), Gaps = 15/364 (4%)
Query: 218 GCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRA 277
G + + TYN+++ + F VS ++ KG + T+T+ ++ +A
Sbjct: 190 GFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKA 248
Query: 278 LEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHS 337
+ + E M + T N L+ + + +E ++ L R PN +TY L++
Sbjct: 249 VGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNG 307
Query: 338 LSSHGYWDGVDDVLEI------MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVS 391
W V +++E M + P V +N+ML GL +S AI L+ M S
Sbjct: 308 ------WCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKS 361
Query: 392 ESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMES 451
+ P++ +Y ++ CK+ ++ I+ + + P Y I G +++
Sbjct: 362 KGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDT 421
Query: 452 AKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVIL 511
EL EM KG PD T+++L E + +M + + + + ++
Sbjct: 422 VYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMK 481
Query: 512 GLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKILK 571
R ++ D M++ PD+ Y LI+ + G +EA + +++ K +K
Sbjct: 482 SYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLD-KGMK 540
Query: 572 TEII 575
T +I
Sbjct: 541 TPLI 544
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 93/236 (39%), Gaps = 38/236 (16%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
++ D +N +L+ L + A +L +M K P+ S T +IR K ++
Sbjct: 329 LKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAI 388
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
+ + MV SG PD +I G + L + +L+++M G PD TYN +I+ M
Sbjct: 389 EYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLM 448
Query: 234 -----------------------------------FDKGNFNEAVSFWKDQLRKGCPPYL 258
F N+ + W + ++KG P
Sbjct: 449 ANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDD 508
Query: 259 ITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQG---VYEE 311
+YTVLI + + A LE+M +G +I YN + + G ++EE
Sbjct: 509 NSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEE 564
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 119/252 (47%), Gaps = 11/252 (4%)
Query: 277 ALEVLEDMAMEGCYPDIITYNSLVS---FTAKQGVYEETYLVISNLLSRGMQPNAVTYNT 333
A +V E+M C ++++N+L+S + K V EE + + LS ++P+ V+YNT
Sbjct: 128 AQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLS--IKPDIVSYNT 185
Query: 334 LIHSLSSHGYWDGVDDVLEIMNETSS---PPTRVTYNIMLNGLCKSGLLDRAISLYSTMV 390
LI +L D + + + +++E + P VT+N +L G + +++ MV
Sbjct: 186 LIKALCEK---DSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMV 242
Query: 391 SESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSME 450
++ DI TYN L GL E E + L L + P + ++N I G G M+
Sbjct: 243 EKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMD 302
Query: 451 SAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVI 510
A+ Y E++ G PD+ T + L C E A+EL KE K + T + ++
Sbjct: 303 EAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLV 362
Query: 511 LGLCKQRKVDIA 522
L K K + A
Sbjct: 363 DELVKGSKREEA 374
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 118/261 (45%), Gaps = 9/261 (3%)
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAME-----GCYP 291
G F A +++ + C ++++ L+ R + +V+E++ E P
Sbjct: 123 GMFENAQKVFEEMPNRDCKRSVLSFNALLS-AYRLS---KKFDVVEELFNELPGKLSIKP 178
Query: 292 DIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVL 351
DI++YN+L+ ++ E ++ + ++G++P+ VT+NTL+ S G ++ +++
Sbjct: 179 DIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIW 238
Query: 352 EIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKE 411
M E + TYN L GL ++L+ + + PD+ ++N ++ G E
Sbjct: 239 AKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINE 298
Query: 412 GFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITH 471
G +DE + P T+ + + + + G ESA EL+ E K + + T
Sbjct: 299 GKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTL 358
Query: 472 SSLAWGFCGVDQLEEAMELLK 492
L + EEA E++K
Sbjct: 359 QQLVDELVKGSKREEAEEIVK 379
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 116/263 (44%), Gaps = 1/263 (0%)
Query: 194 VIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRK- 252
+I K G ++A + E+M C +++N ++ F+ + + K
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKL 174
Query: 253 GCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEET 312
P +++Y LI+ +C A+ +L+++ +G PDI+T+N+L+ + +G +E
Sbjct: 175 SIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELG 234
Query: 313 YLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNG 372
+ + ++ + + + TYN + L++ + ++ + + P ++N M+ G
Sbjct: 235 EEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRG 294
Query: 373 LCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPG 432
G +D A + Y +V PD T+ LL +CK G + I+L G
Sbjct: 295 SINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVG 354
Query: 433 LVTYNIAIDGLARMGSMESAKEL 455
T +D L + E A+E+
Sbjct: 355 QTTLQQLVDELVKGSKREEAEEI 377
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 125/296 (42%), Gaps = 13/296 (4%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
++ ++ L RL ++E + + +I K G + K+ M
Sbjct: 78 DRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPN 137
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDM--SLSG---CSPDAITYNTIIRGMFDK 236
V++ N ++ L D+VE++ L G PD ++YNT+I+ + +K
Sbjct: 138 RDCKRSVLSFNALLSAY----RLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEK 193
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRAL--EVLEDMAMEGCYPDII 294
+ EAV+ + KG P ++T+ L L+ Y L E+ M + DI
Sbjct: 194 DSLPEAVALLDEIENKGLKPDIVTFNTL--LLSSYLKGQFELGEEIWAKMVEKNVAIDIR 251
Query: 295 TYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIM 354
TYN+ + A + +E + L + G++P+ ++N +I + G D + + +
Sbjct: 252 TYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEI 311
Query: 355 NETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCK 410
+ P + T+ ++L +CK+G + AI L+ S+ T L+ L K
Sbjct: 312 VKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVK 367
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 7/181 (3%)
Query: 104 PGK-PVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRG 162
PGK +KP D + N +++ LC + L A L++ + K P + L+
Sbjct: 171 PGKLSIKP------DIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLS 224
Query: 163 LIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPD 222
GQ + G +I MV D+ T N + GL K V+L ++ SG PD
Sbjct: 225 SYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPD 284
Query: 223 AITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLE 282
++N +IRG ++G +EA +++K+ ++ G P T+ +L+ +C+ A+E+ +
Sbjct: 285 VFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFK 344
Query: 283 D 283
+
Sbjct: 345 E 345
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 137/334 (41%), Gaps = 51/334 (15%)
Query: 248 DQLRKGCPP--YLITYTVLIELVCRYCGAIR---ALEVLE------DMAMEGCYPDIITY 296
++ +K C + V V R A R E+LE DM+ EG II
Sbjct: 59 EKFKKACESERFRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARII-- 116
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
S K G++E V + +R + + +++N L LS++ D V E+ NE
Sbjct: 117 ----SLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNAL---LSAYRLSKKFDVVEELFNE 169
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDE 416
P ++ S PDIV+YNTL+ LC++ + E
Sbjct: 170 L---PGKL----------------------------SIKPDIVSYNTLIKALCEKDSLPE 198
Query: 417 GIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAW 476
+ LL + P +VT+N + G E +E++++M+ K + D T+++
Sbjct: 199 AVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLL 258
Query: 477 GFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKP 536
G + +E + L E+ K ++ +I G + K+D A +V+ +P
Sbjct: 259 GLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRP 318
Query: 537 DEKIYDALIKAVADSGMVKEANDLHQRLIEWKIL 570
D+ + L+ A+ +G + A +L + + L
Sbjct: 319 DKATFALLLPAMCKAGDFESAIELFKETFSKRYL 352
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 104/206 (50%), Gaps = 3/206 (1%)
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
+++N+MV +G PD +T ++ + LC+ G + A DL+++++ PD TYN +++ +
Sbjct: 145 RVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHL 204
Query: 234 FDKGNFNEAVSFWKDQLRK--GCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYP 291
+ + F D++R P L+++T+LI+ VC A+ ++ + G P
Sbjct: 205 CKCKDLHVVYEFV-DEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKP 263
Query: 292 DIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVL 351
D YN+++ E V + G++P+ +TYNTLI LS G + L
Sbjct: 264 DCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYL 323
Query: 352 EIMNETSSPPTRVTYNIMLNGLCKSG 377
+ M + P TY ++NG+C+ G
Sbjct: 324 KTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 98/205 (47%), Gaps = 1/205 (0%)
Query: 313 YLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNG 372
+ V++ +++ G++P+ VT + + SL G D D+++ + E SPP TYN +L
Sbjct: 144 HRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKH 203
Query: 373 LCKSGLLDRAISLYSTMVSE-SCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSP 431
LCK L M + PD+V++ L+ +C + E + L+ L P
Sbjct: 204 LCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKP 263
Query: 432 GLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELL 491
YN + G + A +Y +M +G+ PD+IT+++L +G ++EEA L
Sbjct: 264 DCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYL 323
Query: 492 KEMHKKDEKIKHTAYRCVILGLCKQ 516
K M + Y ++ G+C++
Sbjct: 324 KTMVDAGYEPDTATYTSLMNGMCRK 348
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 121/274 (44%), Gaps = 21/274 (7%)
Query: 292 DIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHG------YWD 345
D+ +NS++ V +T + ++L QPN + L SH
Sbjct: 84 DLKFHNSVLQSYGSIAVVNDTVKLFQHILKS--QPNFRPGRSTFLILLSHACRAPDSSIS 141
Query: 346 GVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLL 405
V VL +M P +VT +I + LC++G +D A L + + PD TYN LL
Sbjct: 142 NVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLL 201
Query: 406 SGLCK-------EGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSE 458
LCK FVDE + + P LV++ I ID + ++ A L S+
Sbjct: 202 KHLCKCKDLHVVYEFVDE------MRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSK 255
Query: 459 MIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRK 518
+ G PD ++++ GFC + + EA+ + K+M ++ + Y +I GL K +
Sbjct: 256 LGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGR 315
Query: 519 VDIAIQALDLMVRSRCKPDEKIYDALIKAVADSG 552
V+ A L MV + +PD Y +L+ + G
Sbjct: 316 VEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 98/198 (49%), Gaps = 3/198 (1%)
Query: 217 SGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIR 276
+G PD +T + +R + + G +EA K+ K PP TY L++ +C+ C +
Sbjct: 153 NGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCK-CKDLH 211
Query: 277 AL-EVLEDMAME-GCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTL 334
+ E +++M + PD++++ L+ E ++S L + G +P+ YNT+
Sbjct: 212 VVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTI 271
Query: 335 IHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESC 394
+ + V + M E P ++TYN ++ GL K+G ++ A TMV
Sbjct: 272 MKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGY 331
Query: 395 FPDIVTYNTLLSGLCKEG 412
PD TY +L++G+C++G
Sbjct: 332 EPDTATYTSLMNGMCRKG 349
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 116/266 (43%), Gaps = 11/266 (4%)
Query: 222 DAITYNTIIRGMFDKGNFNEAVSFWKDQLRK--GCPPYLITYTVLIELVCRYCGAI--RA 277
D +N++++ N+ V ++ L+ P T+ +L+ CR +
Sbjct: 84 DLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNV 143
Query: 278 LEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHS 337
VL M G PD +T + V + G +E ++ L + P+ TYN L+
Sbjct: 144 HRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKH 203
Query: 338 LSS----HGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSES 393
L H ++ VD E+ ++ P V++ I+++ +C S L A+ L S + +
Sbjct: 204 LCKCKDLHVVYEFVD---EMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAG 260
Query: 394 CFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAK 453
PD YNT++ G C E + + + P +TYN I GL++ G +E A+
Sbjct: 261 FKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEAR 320
Query: 454 ELYSEMIGKGIVPDEITHSSLAWGFC 479
M+ G PD T++SL G C
Sbjct: 321 MYLKTMVDAGYEPDTATYTSLMNGMC 346
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 1/205 (0%)
Query: 139 RLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGL 198
R++ +M P + +R L + G++D+ ++ + PD T N ++ L
Sbjct: 145 RVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHL 204
Query: 199 CKRGYLKSAVDLVEDMSLS-GCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPY 257
CK L + V++M PD +++ +I + + N EA+ G P
Sbjct: 205 CKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPD 264
Query: 258 LITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVIS 317
Y +++ C A+ V + M EG PD ITYN+L+ +K G EE + +
Sbjct: 265 CFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLK 324
Query: 318 NLLSRGMQPNAVTYNTLIHSLSSHG 342
++ G +P+ TY +L++ + G
Sbjct: 325 TMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 12/230 (5%)
Query: 338 LSSHGYWDGVDDVLEIMNE--TSSP---PTRVTYNIMLNGLCKSGLLDRAIS----LYST 388
L S+G V+D +++ S P P R T+ I+L+ C++ D +IS + +
Sbjct: 92 LQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAP--DSSISNVHRVLNL 149
Query: 389 MVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGS 448
MV+ PD VT + + LC+ G VDE L+ LT + P TYN + L +
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 449 MESAKELYSEMIGK-GIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYR 507
+ E EM + PD ++ + L C L EAM L+ ++ K Y
Sbjct: 210 LHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYN 269
Query: 508 CVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
++ G C K A+ M +PD+ Y+ LI ++ +G V+EA
Sbjct: 270 TIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEA 319
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 1/192 (0%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T + +++LC GR+ A L++ + K P + L++ L K + + +
Sbjct: 158 DQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFV 217
Query: 177 NIMVMSGGV-PDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFD 235
+ M V PD+++ ++I +C L+ A+ LV + +G PD YNTI++G
Sbjct: 218 DEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCT 277
Query: 236 KGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIIT 295
+EAV +K +G P ITY LI + + A L+ M G PD T
Sbjct: 278 LSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTAT 337
Query: 296 YNSLVSFTAKQG 307
Y SL++ ++G
Sbjct: 338 YTSLMNGMCRKG 349
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 168/407 (41%), Gaps = 28/407 (6%)
Query: 165 KIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAI 224
K GQI + + M+ G VP +T N +I G L L++ M L C+PD
Sbjct: 310 KSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH-CAPDTR 368
Query: 225 TYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIR-----ALE 279
TYN +I + A +++K+ G P ++Y L+ Y +IR A
Sbjct: 369 TYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLL-----YAFSIRHMVEEAEG 423
Query: 280 VLEDMAMEGCYPDIITYNSLVSFTAKQGVYEET------YLVISNLLSRGMQPNAVTYNT 333
++ +M + D T ++L + + E++ + V N+ S G N
Sbjct: 424 LIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSAN------ 477
Query: 334 LIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSES 393
I + GY + V I + + T + YN+M+ S ++A L+ +M+S
Sbjct: 478 -IDAYGERGYLSEAERVF-ICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYG 535
Query: 394 CFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAK 453
PD TYNTL+ L +G L + T + Y I ++G + A+
Sbjct: 536 VTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAE 595
Query: 454 ELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGL 513
E+Y EM+ I PD + + L F +++AM ++ M + Y +I
Sbjct: 596 EVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLY 655
Query: 514 CKQRKVDIAIQALDLMVRSRCK---PDEKIYDALIKAVADSGMVKEA 557
K +D A +++S K PD + +I ++ MV++A
Sbjct: 656 TKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKA 702
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 126/300 (42%), Gaps = 8/300 (2%)
Query: 203 YLKSAVDLVEDMSLSGCSP-DAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITY 261
+ + AV++ E GC + I YN ++R + + S W + +RKG P TY
Sbjct: 166 HWERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTY 225
Query: 262 TVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVY---EETYLVIS- 317
LI++ + + AL L M+ G PD +T ++ K + EE + S
Sbjct: 226 GTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSC 285
Query: 318 --NLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCK 375
N + ++ TYNT+I + G + + M E PT VT+N M++
Sbjct: 286 DENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGN 345
Query: 376 SGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVT 435
+G L SL TM C PD TYN L+S K ++ + P V+
Sbjct: 346 NGQLGEVTSLMKTM-KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVS 404
Query: 436 YNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMH 495
Y + + +E A+ L +EM + DE T S+L + + LE++ K H
Sbjct: 405 YRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFH 464
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 139/317 (43%), Gaps = 6/317 (1%)
Query: 188 VITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWK 247
VI N++I + A +L E M G +PD TYNT+++ + ++ + +
Sbjct: 505 VIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLE 564
Query: 248 DQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQG 307
G I Y +I + A EV ++M PD++ Y L++ A G
Sbjct: 565 KMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTG 624
Query: 308 VYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDV----LEIMNETSSPPTR 363
++ + + G+ N+V YN+LI + GY D + + L+ N+T P
Sbjct: 625 NVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDV- 683
Query: 364 VTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYL 423
T N M+N + ++ +A +++ +M + + T+ +L K G +E Q+
Sbjct: 684 YTSNCMINLYSERSMVRKAEAIFDSM-KQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQ 742
Query: 424 LTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQ 483
+ ++YN + A G + A E + EM+ GI PD+ T SL +
Sbjct: 743 MREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGM 802
Query: 484 LEEAMELLKEMHKKDEK 500
++A+ ++E+ KK+ K
Sbjct: 803 SKKAVRKIEEIRKKEIK 819
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 129/315 (40%), Gaps = 6/315 (1%)
Query: 137 AARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIG 196
A L E M P + L++ L KG + M +G V D I VI
Sbjct: 524 ACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVIS 583
Query: 197 GLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPP 256
K G L A ++ ++M PD + Y +I D GN +A+S+ + G P
Sbjct: 584 SFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPG 643
Query: 257 YLITYTVLIELVCRYCGAIRALEVLEDMAMEGC----YPDIITYNSLVSFTAKQGVYEET 312
+ Y LI+L + G + E + ++ C YPD+ T N +++ +++ + +
Sbjct: 644 NSVIYNSLIKLYTK-VGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKA 702
Query: 313 YLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNG 372
+ ++ RG + N T+ ++ +G ++ + + M E ++YN +L
Sbjct: 703 EAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGL 761
Query: 373 LCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPG 432
G A+ + MVS PD T+ +L + L K G + ++ + + G
Sbjct: 762 FALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRG 821
Query: 433 LVTYNIAIDGLARMG 447
L + + L +G
Sbjct: 822 LELWISTLSSLVGIG 836
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 132/304 (43%), Gaps = 6/304 (1%)
Query: 258 LITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVIS 317
+I Y V+I+ +A E+ E M G PD TYN+LV A + + +
Sbjct: 505 VIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLE 564
Query: 318 NLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSG 377
+ G + + Y +I S G + ++V + M E + P V Y +++N +G
Sbjct: 565 KMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTG 624
Query: 378 LLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCS----PGL 433
+ +A+S M + V YN+L+ K G++DE + +Y +C+ P +
Sbjct: 625 NVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEA-EAIYRKLLQSCNKTQYPDV 683
Query: 434 VTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKE 493
T N I+ + + A+ ++ M +G +E T + + + + EEA ++ K+
Sbjct: 684 YTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQ 742
Query: 494 MHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGM 553
M + +Y V+ + A++ MV S +PD+ + +L + GM
Sbjct: 743 MREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGM 802
Query: 554 VKEA 557
K+A
Sbjct: 803 SKKA 806
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 109/478 (22%), Positives = 179/478 (37%), Gaps = 112/478 (23%)
Query: 158 NLIRGLIKIGQIDKGCK------IINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLV 211
N+I I + + K CK + + M+ G P T +I K G A+ +
Sbjct: 186 NVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWL 245
Query: 212 EDMSLSGCSPDAITYNTIIRGMFDKG-NFNEAVSFWKDQLRKGCPPYLITYTVLIELVCR 270
MS G PD +T +++ M+ K F +A F+K + C
Sbjct: 246 GKMSKIGMQPDEVTTGIVLQ-MYKKAREFQKAEEFFK---KWSCD--------------- 286
Query: 271 YCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVT 330
E+ A TYN+++ K G +E +L G+ P VT
Sbjct: 287 -----------ENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVT 335
Query: 331 YNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMV 390
+NT+IH ++G V +++ M +P TR TYNI+++ K+ ++RA + + M
Sbjct: 336 FNTMIHIYGNNGQLGEVTSLMKTMKLHCAPDTR-TYNILISLHTKNNDIERAGAYFKEMK 394
Query: 391 SESCFPDIVTYNTLLSGLCKEGFVDEGIQLL----------------------------- 421
+ PD V+Y TLL V+E L+
Sbjct: 395 DDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLE 454
Query: 422 --------YLLTGTNCSPGLVTYNIAIDGLARMGSMESAKEL--------------YSEM 459
+ + G S G Y+ ID G + A+ + Y+ M
Sbjct: 455 KSWSWFKRFHVAGNMSSEG---YSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVM 511
Query: 460 I-GKGIVPD-----EITHSSLAWGF----CGVDQLEEAMELLKEMHKKD---EKIKHTAY 506
I GI E+ S +++G C + L + + HK EK++ T Y
Sbjct: 512 IKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGY 571
Query: 507 R-------CVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
VI K ++++A + MV +PD +Y LI A AD+G V++A
Sbjct: 572 VSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQA 629
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 119/258 (46%), Gaps = 7/258 (2%)
Query: 307 GVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSP----PT 362
G+ E + + + + ++N L LS++ +D+ ++ E P
Sbjct: 136 GMAEHAHKLFDEMPELNCERTVKSFNAL---LSAYVNSKKLDEAMKTFKELPEKLGITPD 192
Query: 363 RVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLY 422
VTYN M+ LC+ G +D +S++ + PD++++NTLL + EG ++
Sbjct: 193 LVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWD 252
Query: 423 LLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVD 482
L+ N SP + +YN + GL R A L M +GI PD T+++L + +
Sbjct: 253 LMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDN 312
Query: 483 QLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYD 542
LEE M+ EM +K Y +I LCK+ +D A++ + ++ + +Y
Sbjct: 313 NLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYK 372
Query: 543 ALIKAVADSGMVKEANDL 560
+++ + +G + EA L
Sbjct: 373 PVVERLMGAGKIDEATQL 390
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 114/250 (45%), Gaps = 8/250 (3%)
Query: 155 SCTNLIRGLIKIGQIDKGCKIINIMVMSGGV-PDVITCNMVIGGLCKRGYLKSAVDLVED 213
S L+ + ++D+ K + G+ PD++T N +I LC++G + + + E+
Sbjct: 159 SFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEE 218
Query: 214 MSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCG 273
+ +G PD I++NT++ + + F E W K P + +Y + + R
Sbjct: 219 LEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKK 278
Query: 274 AIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNT 333
AL +++ M EG PD+ TYN+L++ EE + + +G+ P+ VTY
Sbjct: 279 FTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCM 338
Query: 334 LIHSLSSHGYWDGVDDVLE--IMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVS 391
LI L G D +V E I ++ S P Y ++ L +G +D A L
Sbjct: 339 LIPLLCKKGDLDRAVEVSEEAIKHKLLSRPN--MYKPVVERLMGAGKIDEATQLVKNGKL 396
Query: 392 ESCF---PDI 398
+S F PD+
Sbjct: 397 QSYFRYLPDL 406
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%)
Query: 218 GCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRA 277
G +PD +TYNT+I+ + KG+ ++ +S +++ + G P LI++ L+E R +
Sbjct: 188 GITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEG 247
Query: 278 LEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHS 337
+ + M + P+I +YNS V + + + +I + + G+ P+ TYN LI +
Sbjct: 248 DRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITA 307
Query: 338 LSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPD 397
+ V M E P VTY +++ LCK G LDRA+ + +
Sbjct: 308 YRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSR 367
Query: 398 IVTYNTLLSGLCKEGFVDEGIQLL 421
Y ++ L G +DE QL+
Sbjct: 368 PNMYKPVVERLMGAGKIDEATQLV 391
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/356 (19%), Positives = 144/356 (40%), Gaps = 38/356 (10%)
Query: 141 IEIMARKSQIPHFPSCTNLIRGLIK-IGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLC 199
+E R + F L I+ + + K I ++ D+ + + VI +
Sbjct: 71 VEKFKRSCESESFRQVHGLYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIML 130
Query: 200 KRGY---LKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPP 256
GY + A L ++M C ++N ++ + +EA+ +K+ P
Sbjct: 131 LYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKE-----LPE 185
Query: 257 YLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVI 316
L G PD++TYN+++ ++G ++ +
Sbjct: 186 KL-----------------------------GITPDLVTYNTMIKALCRKGSMDDILSIF 216
Query: 317 SNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKS 376
L G +P+ +++NTL+ + D + ++M + P +YN + GL ++
Sbjct: 217 EELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRN 276
Query: 377 GLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTY 436
A++L M +E PD+ TYN L++ + ++E ++ + +P VTY
Sbjct: 277 KKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTY 336
Query: 437 NIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLK 492
+ I L + G ++ A E+ E I ++ + + G +++EA +L+K
Sbjct: 337 CMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVK 392
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 96/220 (43%), Gaps = 5/220 (2%)
Query: 331 YNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTR--VTYNIMLNGLCKSGLLDRAISLYST 388
Y+ I L + +D+VL+ + + V ++L G SG+ + A L+
Sbjct: 90 YSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGY--SGMAEHAHKLFDE 147
Query: 389 MVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGT-NCSPGLVTYNIAIDGLARMG 447
M +C + ++N LLS +DE ++ L +P LVTYN I L R G
Sbjct: 148 MPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKG 207
Query: 448 SMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYR 507
SM+ ++ E+ G PD I+ ++L F + E + M K+ +Y
Sbjct: 208 SMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYN 267
Query: 508 CVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKA 547
+ GL + +K A+ +D+M PD Y+ALI A
Sbjct: 268 SRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITA 307
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 77/167 (46%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T N +++ LC +G + + E + + P S L+ + +G +I
Sbjct: 192 DLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIW 251
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
++M P++ + N + GL + A++L++ M G SPD TYN +I
Sbjct: 252 DLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVD 311
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLED 283
N E + + + KG P +TY +LI L+C+ RA+EV E+
Sbjct: 312 NNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEE 358
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 138/319 (43%), Gaps = 46/319 (14%)
Query: 274 AIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNT 333
A AL VL D + YN ++ A +G ++I + G+ P+ +TY +
Sbjct: 146 ADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTS 205
Query: 334 LIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSES 393
+I+ + G D + + M++ VTY+ +L G+CKSG ++RA+ L + M E
Sbjct: 206 MINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKED 265
Query: 394 ----CFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDG------- 442
P+ VTY ++ C++ V+E + +L + C P VT + I G
Sbjct: 266 GGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDED 325
Query: 443 -----------------------------LARMGSMESAKELYSEMIGKGIVPDEITHSS 473
L RM E A++++ M+ +G+ PD + S
Sbjct: 326 VKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSH 385
Query: 474 LAWGFCGVDQLEEAMELLKEMHKKDEK--IKHTAYRCVILGLCKQ----RKVDIAIQALD 527
+ C +++ + L +E+ KKD K I + ++LGLC+Q +A LD
Sbjct: 386 VFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAKLAKSMLD 445
Query: 528 LMVRSRCKPDEKIYDALIK 546
+R + EKI +AL K
Sbjct: 446 KKMRLKVSHVEKIIEALKK 464
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 118/263 (44%), Gaps = 5/263 (1%)
Query: 280 VLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLS 339
V+E E C+ ++ T +++ + + +E V+ + + V YN +I +
Sbjct: 117 VIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFA 176
Query: 340 SHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIV 399
G + D +++ M+ P +TY M+NG C +G +D A L M C + V
Sbjct: 177 DKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSV 236
Query: 400 TYNTLLSGLCKEGFVDEGIQLLYLLT----GTNCSPGLVTYNIAIDGLARMGSMESAKEL 455
TY+ +L G+CK G ++ ++LL + G SP VTY + I +E A +
Sbjct: 237 TYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLV 296
Query: 456 YSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAM-ELLKEMHKKDEKIKHTAYRCVILGLC 514
M +G +P+ +T L G D+ +A+ +L+ ++ K + + L
Sbjct: 297 LDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLI 356
Query: 515 KQRKVDIAIQALDLMVRSRCKPD 537
+ ++ + A + LM+ +PD
Sbjct: 357 RMKRWEEAEKIFRLMLVRGVRPD 379
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 143/334 (42%), Gaps = 41/334 (12%)
Query: 113 FVRNDGFTNNK---ILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTN------LIRGL 163
+ + + F N K I+ LC + L A + + P F C + +IR
Sbjct: 121 YRKEECFVNVKTMRIVLTLCNQANLADEALWV-----LRKFPEFNVCADTVAYNLVIRLF 175
Query: 164 IKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDA 223
G ++ +I M G PDVIT +I G C G + A L ++MS C ++
Sbjct: 176 ADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNS 235
Query: 224 ITYNTIIRGMFDKGNFNEAVSFWKDQLRKG----CPPYLITYTVLIELVCRYCGAIRALE 279
+TY+ I+ G+ G+ A+ + ++ P +TYT++I+ C AL
Sbjct: 236 VTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALL 295
Query: 280 VLEDMAMEGCYPDIITYNSLVSFTAKQGVYE--ETYLVISNLLSRGMQPNAVT----YNT 333
VL+ M GC P+ +T L+ QGV E E +S L+ + ++ V+ +++
Sbjct: 296 VLDRMGNRGCMPNRVTACVLI-----QGVLENDEDVKALSKLIDKLVKLGGVSLSECFSS 350
Query: 334 LIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAIS---LYSTM- 389
SL W+ + + +M P + + + LC LL+R + LY +
Sbjct: 351 ATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELC---LLERYLDCFLLYQEIE 407
Query: 390 ---VSESCFPDIVTYNTLLSGLCKEGFVDEGIQL 420
V + DI + LL GLC++G E +L
Sbjct: 408 KKDVKSTIDSDI--HAVLLLGLCQQGNSWEAAKL 439
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 80/170 (47%), Gaps = 4/170 (2%)
Query: 392 ESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMES 451
E CF ++ T +L+ + DE + +L N V YN+ I A G +
Sbjct: 124 EECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNI 183
Query: 452 AKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVIL 511
A L EM G+ PD IT++S+ G+C ++++A L KEM K D + Y ++
Sbjct: 184 ADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILE 243
Query: 512 GLCKQRKVDIAIQALDLMVRSR----CKPDEKIYDALIKAVADSGMVKEA 557
G+CK ++ A++ L M + P+ Y +I+A + V+EA
Sbjct: 244 GVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEA 293
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 134/312 (42%), Gaps = 8/312 (2%)
Query: 109 KPPPF-VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIG 167
K P F V D N +++ +G L A LI+ M P + T++I G G
Sbjct: 155 KFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAG 214
Query: 168 QIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSG----CSPDA 223
+ID ++ M V + +T + ++ G+CK G ++ A++L+ +M SP+A
Sbjct: 215 KIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNA 274
Query: 224 ITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLED 283
+TY +I+ +K EA+ +GC P +T VLI+ V ++AL L D
Sbjct: 275 VTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLID 334
Query: 284 MAME-GCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLS-SH 341
++ G ++S + +EE + +L RG++P+ + + + L
Sbjct: 335 KLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLE 394
Query: 342 GYWDGVDDVLEI-MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVT 400
Y D EI + S + ++L GLC+ G A L +M+ + +
Sbjct: 395 RYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAKLAKSMLDKKMRLKVSH 454
Query: 401 YNTLLSGLCKEG 412
++ L K G
Sbjct: 455 VEKIIEALKKTG 466
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 149/365 (40%), Gaps = 11/365 (3%)
Query: 115 RNDGFTNN--KILQNLCTRGRLMAAARLIEIMARKSQI-PHFPSCTNLIRGLIKIGQIDK 171
+ +G+ N + L +L + + + A + +++ ++ P + L+ L K GQ ++
Sbjct: 83 KANGWVNTVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNR 142
Query: 172 GCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDM-SLSGCSPDAITYNTII 230
K+ + M+ G P V ++ + + A +++ M S C PD TY+T++
Sbjct: 143 AQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLL 202
Query: 231 RGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAME-GC 289
+ D F+ S +K+ + P +T +++ R + +VL DM + C
Sbjct: 203 KACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTAC 262
Query: 290 YPDIITYNSLVSFTAKQG---VYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDG 346
PD+ T N ++S G + E Y N G++P T+N LI S +D
Sbjct: 263 KPDVWTMNIILSVFGNMGKIDMMESWYEKFRNF---GIEPETRTFNILIGSYGKKRMYDK 319
Query: 347 VDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLS 406
+ V+E M + P T TYN ++ G + M SE D T+ L++
Sbjct: 320 MSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLIN 379
Query: 407 GLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVP 466
G G + I + L YN I A+ + + +Y M + V
Sbjct: 380 GYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVC 439
Query: 467 DEITH 471
D T
Sbjct: 440 DSRTF 444
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 130/309 (42%), Gaps = 2/309 (0%)
Query: 260 TYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNL 319
TY L+ L+ + RA ++ ++M EG P + Y +L++ + + ++ + ++ +
Sbjct: 126 TYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKM 185
Query: 320 LSRGM-QPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGL 378
S QP+ TY+TL+ + +D VD + + M+E P VT NI+L+G + G
Sbjct: 186 KSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGR 245
Query: 379 LDRAISLYSTM-VSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYN 437
D+ + S M VS +C PD+ T N +LS G +D P T+N
Sbjct: 246 FDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFN 305
Query: 438 IAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKK 497
I I + + + M T++++ F V + +M +
Sbjct: 306 ILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSE 365
Query: 498 DEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
K + C+I G I ++ L + + Y+A+I A A + + E
Sbjct: 366 GMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEM 425
Query: 558 NDLHQRLIE 566
++ R+ E
Sbjct: 426 ERVYIRMKE 434
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 117/286 (40%), Gaps = 11/286 (3%)
Query: 275 IRALEVLEDMAMEGCY--PDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYN 332
++ALEV DM E + P TY L+ K G + +L G++P Y
Sbjct: 105 LQALEVF-DMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYT 163
Query: 333 TLIHSLSSHGYWDGVDDVLEIMNETSS----PPTRVTYNIMLNGLCKSGLLDRAISLYST 388
L L+++ + +DD I+++ S P TY+ +L + D SLY
Sbjct: 164 AL---LAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKE 220
Query: 389 MVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLY-LLTGTNCSPGLVTYNIAIDGLARMG 447
M P+ VT N +LSG + G D+ ++L +L T C P + T NI + MG
Sbjct: 221 MDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMG 280
Query: 448 SMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYR 507
++ + Y + GI P+ T + L + ++ +++ M K + + Y
Sbjct: 281 KIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYN 340
Query: 508 CVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGM 553
+I D M K D K + LI A++G+
Sbjct: 341 NIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGL 386
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 112/277 (40%), Gaps = 10/277 (3%)
Query: 149 QIPHFPSC-------TNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKR 201
++ FP C + L++ + Q D + M P+ +T N+V+ G +
Sbjct: 184 KMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRV 243
Query: 202 GYLKSAVDLVEDMSLS-GCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRK-GCPPYLI 259
G ++ DM +S C PD T N I+ + G + S W ++ R G P
Sbjct: 244 GRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMES-WYEKFRNFGIEPETR 302
Query: 260 TYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNL 319
T+ +LI + + V+E M TYN+++ A G + L +
Sbjct: 303 TFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQM 362
Query: 320 LSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLL 379
S GM+ + T+ LI+ ++ G + V +++ + P YN +++ K+ L
Sbjct: 363 RSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKADDL 422
Query: 380 DRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDE 416
+Y M C D T+ ++ KEG D+
Sbjct: 423 IEMERVYIRMKERQCVCDSRTFEIMVEAYEKEGMNDK 459
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 77/168 (45%), Gaps = 5/168 (2%)
Query: 332 NTLIHSLS---SHGYWDGVDDVLEIMNE-TSSPPTRVTYNIMLNGLCKSGLLDRAISLYS 387
NT+ +LS + W +V +++ E T P TY +L L KSG +RA L+
Sbjct: 89 NTVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFD 148
Query: 388 TMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLL-YLLTGTNCSPGLVTYNIAIDGLARM 446
M+ E P + Y LL+ + +D+ +L + + C P + TY+ +
Sbjct: 149 EMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDA 208
Query: 447 GSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEM 494
+ LY EM + I P+ +T + + G+ V + ++ ++L +M
Sbjct: 209 SQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDM 256
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 145/340 (42%), Gaps = 3/340 (0%)
Query: 194 VIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAV-SFWKDQLRK 252
VI G ++ A+++ + C P A T N ++ + K E V R
Sbjct: 114 VIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRM 173
Query: 253 GCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYE-- 310
G T+ +LI+ +CR A E++ M+ + D Y+ L+S K
Sbjct: 174 GVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCF 233
Query: 311 ETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIML 370
+ + +L P Y ++ L G V VL M P V Y I+L
Sbjct: 234 DVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVL 293
Query: 371 NGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCS 430
G+ +A L+ ++ PD+ TYN ++GLCK+ ++ ++++ +
Sbjct: 294 QGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSE 353
Query: 431 PGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMEL 490
P +VTYNI I L + G + AK L+ EM G+ + T + + VD++ A L
Sbjct: 354 PNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGL 413
Query: 491 LKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMV 530
L+E + +K + VI LC++ +D A++ L +V
Sbjct: 414 LEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELLAHLV 453
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 113/252 (44%), Gaps = 13/252 (5%)
Query: 326 PNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRV---TYNIMLNGLCKSGLLDRA 382
P+A T N L+ L ++ V EI+ + R+ T+ I+++ LC+ G +D A
Sbjct: 141 PSAYTLNALLLVLVRKR--QSLELVPEILVKACRMGVRLEESTFGILIDALCRIGEVDCA 198
Query: 383 ISLYSTMVSESCFPDIVTYNTLLSGLCK--EGFVDEGIQLLYLLTGTNCSPGLVTYNIAI 440
L M +S D Y+ LLS +CK + + I L L T SPGL Y + +
Sbjct: 199 TELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVM 258
Query: 441 DGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEK 500
L G + + ++M + PD + ++ + G + +A +L E+
Sbjct: 259 RFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLA 318
Query: 501 IKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDL 560
Y I GLCKQ ++ A++ + M + +P+ Y+ LIKA+ +G + A L
Sbjct: 319 PDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTL 378
Query: 561 HQRLIEWKILKT 572
WK ++T
Sbjct: 379 ------WKEMET 384
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 141/332 (42%), Gaps = 43/332 (12%)
Query: 95 RRESGELVDPGKPVKPPPF-VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHF 153
+R+S ELV P VK VR + T ++ LC G + A L+ M++ S I
Sbjct: 156 KRQSLELV-PEILVKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDP 214
Query: 154 PSCTNLIRGLIKIGQIDKGC----KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVD 209
+ L+ + K D C + + + P + +V+ L + G K V
Sbjct: 215 RLYSRLLSSVCK--HKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVS 272
Query: 210 LVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVC 269
++ M PD + Y +++G+ ++ +A + + L G P + TY V I +C
Sbjct: 273 VLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLC 332
Query: 270 RYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAV 329
+ AL+++ M G P+++TYN L+ K G + + + G+ N+
Sbjct: 333 KQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSH 392
Query: 330 TYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTM 389
T++ +I + + VD+V +C GLL+ A ++ +
Sbjct: 393 TFDIMISA------YIEVDEV----------------------VCAHGLLEEAFNM-NVF 423
Query: 390 VSESCFPDIVTYNTLLSGLCKEGFVDEGIQLL 421
V S +++ S LC++G +D+ ++LL
Sbjct: 424 VKSSRIEEVI------SRLCEKGLMDQAVELL 449
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 101/246 (41%), Gaps = 24/246 (9%)
Query: 317 SNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKS 376
SNLL+ NA TL+ S H + PT Y ++ L KS
Sbjct: 44 SNLLTDS--ENASVMRTLLSSFQLH----------------NCEPTPQAYRFVIKTLAKS 85
Query: 377 GLLDRAIS-LYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVT 435
L+ S LY VSE + +++ G ++E I++ + + C P T
Sbjct: 86 SQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYT 145
Query: 436 YNIAIDGLAR-MGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEM 494
N + L R S+E E+ + G+ +E T L C + +++ A EL++ M
Sbjct: 146 LNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYM 205
Query: 495 HKKDEKIKHTAYRCVILGLCKQRK---VDIAIQALDLMVRSRCKPDEKIYDALIKAVADS 551
+ + Y ++ +CK + D+ I L+ + ++R P + Y +++ + +
Sbjct: 206 SQDSVIVDPRLYSRLLSSVCKHKDSSCFDV-IGYLEDLRKTRFSPGLRDYTVVMRFLVEG 264
Query: 552 GMVKEA 557
G KE
Sbjct: 265 GRGKEV 270
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/465 (21%), Positives = 191/465 (41%), Gaps = 41/465 (8%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N +++ LCT + AA +++ M K IP SC LI L + +K N +
Sbjct: 743 NHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRA---NKAGTAFN---L 796
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
+ + +I GL G + A + + M +G S YN + +G N+ +
Sbjct: 797 AEQIDSSYVHYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWMK 856
Query: 242 AVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPD-IITYNSLV 300
+RK + +Y + +C ++ A+ + E + + P +I YN L+
Sbjct: 857 VEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVIIYNMLI 916
Query: 301 SFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSP 360
+ + + E V+ + RG+ P+ T+N L+H SS + L M
Sbjct: 917 FYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMK 976
Query: 361 PTRVTYNIMLNGLCKSGLLDRAISLYS--------------------TMVSESCFP---D 397
P + + + LC +G + +A+ L+ T++S+ P D
Sbjct: 977 PNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAED 1036
Query: 398 IVT-----------YNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARM 446
+T Y+ ++ L G +D + LL + PG +Y+ I+GL R
Sbjct: 1037 FLTRVTRNGMMAPNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRY 1096
Query: 447 GSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAY 506
++ A + ++EM+ G+ P T S L FC Q+ E+ L+K M E +
Sbjct: 1097 NQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMF 1156
Query: 507 RCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADS 551
+ VI ++ A + +++M + + D + + +LI ++ S
Sbjct: 1157 KTVIDRFRVEKNTVKASEMMEMMQKCGYEVDFETHWSLISNMSSS 1201
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/435 (20%), Positives = 187/435 (42%), Gaps = 14/435 (3%)
Query: 137 AARLIEIMARKSQIPHFPSCTN-LIRGLIKIGQIDKGCKIINIMVMSGGV---PDVITCN 192
A L + M RK +P SC LI L+++ + + +I V + ++ +
Sbjct: 202 AVMLFDWMRRKGLVP-LTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSIG 260
Query: 193 MVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRK 252
VI LC ++ A L + GC ++ Y+ I G +K +F + +SF + K
Sbjct: 261 KVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIGEV--K 318
Query: 253 GCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEET 312
P + +L L CR G+ RA +E++ G D +T+ L+ + +G +
Sbjct: 319 YEPDVFVGNRILHSL-CRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRA 377
Query: 313 YLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNG 372
L +S ++S+G +P+ +YN ++ L G W +L+ M E + T+ IM+ G
Sbjct: 378 VLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTG 437
Query: 373 LCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPG 432
CK+ + A + + M + L GF ++L T
Sbjct: 438 YCKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRDNDSTFSKAE 497
Query: 433 LVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLK 492
++ +GL +++ ++ + ++ + ++P+ +SL L+ A+ LL
Sbjct: 498 F--FDDLGNGLYLHTDLDAYEQRVNMVLDRSVLPE---FNSLIVRASEDGDLQTALRLLD 552
Query: 493 EMHKKDEKIKHTAYRCVILGLCKQR-KVDIAIQALDLMVRSRCKPDEKIYDALIKAVADS 551
EM + +K+ ++ ++ LC R + ++I L+ + + D + + L++
Sbjct: 553 EMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQEYCKK 612
Query: 552 GMVKEANDLHQRLIE 566
G + + + ++++
Sbjct: 613 GFSRHSKLIFHKMVQ 627
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 99/485 (20%), Positives = 192/485 (39%), Gaps = 41/485 (8%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T +++ C + L + + +P C +L L++ G +++ ++
Sbjct: 633 DNVTYTSLIRCFCKKETLNDLLNVWGAAQNDNWLPDLNDCGDLWNCLVRKGLVEEVVQLF 692
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
+ +S + C + + L G+ A +V+ + GC + YN +I+G+ +
Sbjct: 693 ERVFISYPLSQSEACRIFVEKLTVLGFSCIAHSVVKRLEGEGCIVEQEVYNHLIKGLCTE 752
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
+ A + + L K P L + +LI +CR A A + E + + +I
Sbjct: 753 KKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGTAFNLAEQIDSSYVHYALIKG 812
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
SL A + + E L I +LS G+ YN + W V++VL +M
Sbjct: 813 LSL----AGKMLDAENQLRI--MLSNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGLMVR 866
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISLYS-TMVSESCFPDIVTYNTLLSGLCKEGFVD 415
+ + +Y + +C AISL ++ ES ++ YN L+ + +
Sbjct: 867 KNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVIIYNMLIFYMFRAKNHL 926
Query: 416 EGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLA 475
E ++L + G P T+N + G + S+ S MI KG+ P+ + ++
Sbjct: 927 EVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVT 986
Query: 476 WGFCGVDQLEEAMELLKEMHKK---------DEKIKHTA--------------------- 505
C +++A++L + M K KI T
Sbjct: 987 SSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGM 1046
Query: 506 ----YRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLH 561
Y +I L + +DIA+ L+ M++++ P YD++I + + +A D H
Sbjct: 1047 MAPNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFH 1106
Query: 562 QRLIE 566
++E
Sbjct: 1107 TEMVE 1111
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 93/469 (19%), Positives = 176/469 (37%), Gaps = 51/469 (10%)
Query: 129 CTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDV 188
C G + A + + K P S ++ GL + G I++ M +G + +
Sbjct: 369 CYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSL 428
Query: 189 ITCNMVIGGLCKRGYLKSAVDLVEDM-------------------SLSGCSPDAITYNTI 229
T +++ G CK + A +V M SL G P A+
Sbjct: 429 STFKIMVTGYCKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRD 488
Query: 230 IRGMFDKGNFNEAVSFWKDQLRKGCPPY------------LITYTVLIE---LVCRYC-- 272
F K F D L G + ++ +VL E L+ R
Sbjct: 489 NDSTFSKAEFF-------DDLGNGLYLHTDLDAYEQRVNMVLDRSVLPEFNSLIVRASED 541
Query: 273 GAIR-ALEVLEDMAMEGCYPDIITYNSLV-SFTAKQGVYEETYLVISNLLSRGMQPNAVT 330
G ++ AL +L++MA G ++ L+ S A + + ++ Q + T
Sbjct: 542 GDLQTALRLLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGET 601
Query: 331 YNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMV 390
N L+ G+ + M + P VTY ++ CK L+ ++++
Sbjct: 602 LNFLVQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQ 661
Query: 391 SESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSME 450
+++ PD+ L + L ++G V+E +QL + + I ++ L +G
Sbjct: 662 NDNWLPDLNDCGDLWNCLVRKGLVEEVVQLFERVFISYPLSQSEACRIFVEKLTVLGFSC 721
Query: 451 SAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVI 510
A + + G+G + ++ ++ L G C + A +L EM K + +I
Sbjct: 722 IAHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLI 781
Query: 511 LGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEAND 559
LC+ K A + + S ++ ALIK ++ +G + +A +
Sbjct: 782 PRLCRANKAGTAFNLAEQIDSSY------VHYALIKGLSLAGKMLDAEN 824
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 162/386 (41%), Gaps = 65/386 (16%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
V +DG ++ + G + +A L+ ++ SC +I +K G +++
Sbjct: 335 VDHDGRLAKSLVHMYASSGLIASAQSLL------NESFDLQSCNIIINRYLKNGDLERAE 388
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
+ + + D ++ +I G + G + A L + + D +T+ +I G+
Sbjct: 389 TLFERV---KSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLH----DKDGVTWTVMISGL 441
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDM-----AMEG 288
F EA S D +R G P TY+VL+ GA L+ + +
Sbjct: 442 VQNELFAEAASLLSDMVRCGLKPLNSTYSVLLS----SAGATSNLDQGKHIHCVIAKTTA 497
Query: 289 CY-PDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGV 347
CY PD+I NSLVS AK G E+ Y + + ++ Q + V++N++I LS HG D
Sbjct: 498 CYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMV----QKDTVSWNSMIMGLSHHGLADKA 553
Query: 348 DDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSG 407
++ + M ++ P VT+ +L+ SGL+ R + L+ M
Sbjct: 554 LNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAM------------------ 595
Query: 408 LCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPD 467
KE + + PG+ Y ID L R G ++ A+E S + PD
Sbjct: 596 --KETY--------------SIQPGIDHYISMIDLLGRAGKLKEAEEFISAL---PFTPD 636
Query: 468 EITHSSLAWGFCGVDQLEEAMELLKE 493
+ +L G CG++ ++ E + E
Sbjct: 637 HTVYGALL-GLCGLNWRDKDAEGIAE 661
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 100/480 (20%), Positives = 195/480 (40%), Gaps = 63/480 (13%)
Query: 124 ILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSG 183
+L LC GR A L + M ++ + S L+ GLI+ G ++K ++ + M
Sbjct: 144 MLTALCDDGRSEDAVELFDEMPERNVV----SWNTLVTGLIRNGDMEKAKQVFDAMPSR- 198
Query: 184 GVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAV 243
DV++ N +I G + ++ A L DMS + +T+ +++ G G+ EA
Sbjct: 199 ---DVVSWNAMIKGYIENDGMEEAKLLFGDMS----EKNVVTWTSMVYGYCRYGDVREAY 251
Query: 244 SFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMA--MEGCYPDIITYNSLVS 301
+ + + ++++T +I AL + +M ++ P+ T SL
Sbjct: 252 RLFCEMPERN----IVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAY 307
Query: 302 FTAKQGVY-----EETYL-VISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLE--- 352
GV E+ + VISN + + +L+H +S G +L
Sbjct: 308 ACGGLGVEFRRLGEQLHAQVISNGWET-VDHDGRLAKSLVHMYASSGLIASAQSLLNESF 366
Query: 353 -----------------------IMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTM 389
+ S +V++ M++G ++G + RA L+ +
Sbjct: 367 DLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKL 426
Query: 390 VSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSM 449
+ D VT+ ++SGL + E LL + P TY++ + ++
Sbjct: 427 HDK----DGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNL 482
Query: 450 ESAKELYSEMIGKGIV---PDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAY 506
+ K ++ +I K PD I +SL + +E+A E+ +M +KD ++
Sbjct: 483 DQGKHIHC-VIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDT----VSW 537
Query: 507 RCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
+I+GL D A+ M+ S KP+ + ++ A + SG++ +L + + E
Sbjct: 538 NSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKE 597
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 100/487 (20%), Positives = 200/487 (41%), Gaps = 81/487 (16%)
Query: 118 GFTNNK--ILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKI 175
GF+N + IL+ L + G L+ A L++ + ++ I T+L+ K G +D+ +
Sbjct: 41 GFSNEEALILRRL-SEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVL 99
Query: 176 INIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFD 235
+M +++TCN ++ G K + A L +M + +++ ++ + D
Sbjct: 100 FEVMPER----NIVTCNAMLTGYVKCRRMNEAWTLFREM-----PKNVVSWTVMLTALCD 150
Query: 236 KGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIIT 295
G +AV + + + ++++ L+ + R +A +V + M D+++
Sbjct: 151 DGRSEDAVELFDEMPERN----VVSWNTLVTGLIRNGDMEKAKQVFDAMPSR----DVVS 202
Query: 296 YNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMN 355
+N+++ + EE L+ ++ + N VT+ ++++ +G DV E
Sbjct: 203 WNAMIKGYIENDGMEEAKLLFGDM----SEKNVVTWTSMVYGYCRYG------DVREAYR 252
Query: 356 ETSSPPTR--VTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYN--TLLS----- 406
P R V++ M++G + L A+ L+ M + D V+ N TL+S
Sbjct: 253 LFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKD---VDAVSPNGETLISLAYAC 309
Query: 407 -GLCKE---------------GF--VDEGIQLLYLLTGTNCSPGLVTY------------ 436
GL E G+ VD +L L S GL+
Sbjct: 310 GGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQ 369
Query: 437 --NIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEM 494
NI I+ + G +E A+ L+ + + D+++ +S+ G+ + A L +++
Sbjct: 370 SCNIIINRYLKNGDLERAETLFERVKS---LHDKVSWTSMIDGYLEAGDVSRAFGLFQKL 426
Query: 495 HKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMV 554
H KD + +I GL + A L MVR KP Y L+ + + +
Sbjct: 427 HDKD----GVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNL 482
Query: 555 KEANDLH 561
+ +H
Sbjct: 483 DQGKHIH 489
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 116/244 (47%), Gaps = 6/244 (2%)
Query: 102 VDP-GKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFP---SCT 157
VDP G+P P D +++ GR+ AR++E M R+ P + T
Sbjct: 397 VDPSGEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYT 456
Query: 158 NLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSL- 216
++ + G +D+ +++ M G + IT N+++ G CK+ + A DL+ +M+
Sbjct: 457 TVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTED 516
Query: 217 SGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIR 276
+G PD ++YN II G + A++F+ + +G P I+YT L++
Sbjct: 517 AGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKL 576
Query: 277 ALEVLEDMAMEG-CYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLI 335
A V ++M + D+I +N LV + G+ E+ V+S + G PN TY +L
Sbjct: 577 ANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLA 636
Query: 336 HSLS 339
+ +S
Sbjct: 637 NGVS 640
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 107/231 (46%), Gaps = 5/231 (2%)
Query: 185 VPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLS---GCSPDAITYNTIIRGMFDKGNFNE 241
PD ++ G K G + ++E M PD +TY T++ + G +
Sbjct: 411 APDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDR 470
Query: 242 AVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAME-GCYPDIITYNSLV 300
A + R G P ITY VL++ C+ RA ++L +M + G PD+++YN ++
Sbjct: 471 ARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIII 530
Query: 301 SFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVL-EIMNETSS 359
+ + +RG+ P ++Y TL+ + + G + V E+MN+
Sbjct: 531 DGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRV 590
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCK 410
+ +N+++ G C+ GL++ A + S M +P++ TY +L +G+ +
Sbjct: 591 KVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQ 641
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 106/444 (23%), Positives = 185/444 (41%), Gaps = 44/444 (9%)
Query: 151 PHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKR-GYLKSAVD 209
P + ++ +G DK K+ M PDV+T N++I LC R G + V
Sbjct: 234 PDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMI-KLCARVGRKELIVF 292
Query: 210 LVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEA---VSFWKDQLRKGCPPYLITYTVLIE 266
++E + G T ++++ G+ A V +++ R C
Sbjct: 293 VLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCK----------- 341
Query: 267 LVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISN-------- 318
V R C A E E+ A + +S ++A+ V EE + +
Sbjct: 342 -VLRECNAEDLKEKEEEEAEDDEDAFEDDEDS--GYSARDEVSEEGVVDVFKKLLPNSVD 398
Query: 319 ------LLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIM---NETSSPPTRVTYNIM 369
LL + P++ Y TL+ +G +LE M ++ +S P VTY +
Sbjct: 399 PSGEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTV 458
Query: 370 LNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLT-GTN 428
++ +GL+DRA + + M + +TYN LL G CK+ +D LL +T
Sbjct: 459 VSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAG 518
Query: 429 CSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAM 488
P +V+YNI IDG + A ++EM +GI P +I++++L F Q + A
Sbjct: 519 IEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLAN 578
Query: 489 ELLKEMHKKDE-KIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKA 547
+ EM K+ A+ ++ G C+ ++ A + + M + P+ Y +L
Sbjct: 579 RVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANG 638
Query: 548 VADSGMVKEANDLHQRLIEWKILK 571
V+ + +A L+ WK +K
Sbjct: 639 VSQARKPGDA------LLLWKEIK 656
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 124/290 (42%), Gaps = 18/290 (6%)
Query: 270 RYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAV 329
R R LE + +PD +TY ++VS G+ + V++ + G+ N +
Sbjct: 429 RVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRI 488
Query: 330 TYNTLIHSLSSHGYWDGVDDVLEIMNETSS-PPTRVTYNIMLNGLCKSGLLDRAISLYST 388
TYN L+ D +D+L M E + P V+YNI+++G A++ ++
Sbjct: 489 TYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNE 548
Query: 389 MVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLL-YLLTGTNCSPGLVTYNIAIDGLARMG 447
M + P ++Y TL+ G ++ ++ L+ +N+ ++G R+G
Sbjct: 549 MRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLG 608
Query: 448 SMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYR 507
+E A+ + S M G P+ T+ SLA G + +A+ L KE+ + R
Sbjct: 609 LIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKE----------R 658
Query: 508 CVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
C + K+ D + M+ KPDE + D L + K+A
Sbjct: 659 CAVKK--KEAPSDSSSDPAPPML----KPDEGLLDTLADICVRAAFFKKA 702
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 109/260 (41%), Gaps = 29/260 (11%)
Query: 189 ITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKD 248
ITC M G + G++K A+ M C PD YNTII + GNF +A F D
Sbjct: 168 ITCLMKCLG--EEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKA-RFLLD 224
Query: 249 QLRKG---CPPYLITYTVLIELVCRY-----C-GAIR-----ALEVLEDMAMEGCYPDII 294
Q++ PP TYT+LI CRY C AIR A + +M G PD++
Sbjct: 225 QMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVV 284
Query: 295 TYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIM 354
TYN L+ K + ++ ++G PN VTYN+ I S +G +++ M
Sbjct: 285 TYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTM 344
Query: 355 NET-SSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
+ P TY +++ L ++ A L MV P TY + L EG
Sbjct: 345 KKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGL 404
Query: 414 VD-----------EGIQLLY 422
EGIQ Y
Sbjct: 405 ASTLDEELHKRMREGIQQRY 424
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 92/207 (44%), Gaps = 14/207 (6%)
Query: 186 PDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCS--PDAITYNTIIRGMFDKG------ 237
PDV N +I LC+ G K A L++ M L G PD TY +I G
Sbjct: 198 PDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCR 257
Query: 238 -----NFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPD 292
EA +++ L +G P ++TY LI+ C+ RALE+ EDM +GC P+
Sbjct: 258 KAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPN 317
Query: 293 IITYNSLVSFTAKQGVYEETYLVISNLLSRGMQ-PNAVTYNTLIHSLSSHGYWDGVDDVL 351
+TYNS + + + E ++ + G P + TY LIH+L D++
Sbjct: 318 QVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLV 377
Query: 352 EIMNETSSPPTRVTYNIMLNGLCKSGL 378
M E P TY ++ + L GL
Sbjct: 378 VEMVEAGLVPREYTYKLVCDALSSEGL 404
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 126/294 (42%), Gaps = 24/294 (8%)
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNT---LIHSLSSHGYWDGVDDV 350
IT + AK ++ + + + R N VT + L+ L G+
Sbjct: 128 ITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALAT 187
Query: 351 LEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCF--PDIVTYNTLLSGL 408
M E P YN ++N LC+ G +A L M PD TY L+S
Sbjct: 188 FYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSY 247
Query: 409 CKEGF-----------VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYS 457
C+ G + E ++ + P +VTYN IDG + + A EL+
Sbjct: 248 CRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFE 307
Query: 458 EMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIK-HTAYRCVILGLCKQ 516
+M KG VP+++T++S + +++E A+E+++ M K + + Y +I L +
Sbjct: 308 DMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVET 367
Query: 517 RKVDIAIQALDL---MVRSRCKPDEKIYDALIKAVADSGMVKEAN-DLHQRLIE 566
R+ A +A DL MV + P E Y + A++ G+ + +LH+R+ E
Sbjct: 368 RR---AAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLASTLDEELHKRMRE 418
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 24/211 (11%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFP------SCTNLIRGLIKIGQID 170
D + N I+ LC G A L++ M Q+P F + T LI + G +
Sbjct: 199 DVYAYNTIINALCRVGNFKKARFLLDQM----QLPGFRYPPDTYTYTILISSYCRYG-MQ 253
Query: 171 KGCK------------IINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSG 218
GC+ + M+ G VPDV+T N +I G CK + A++L EDM G
Sbjct: 254 TGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKG 313
Query: 219 CSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGC-PPYLITYTVLIELVCRYCGAIRA 277
C P+ +TYN+ IR A+ + + G P TYT LI + A A
Sbjct: 314 CVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEA 373
Query: 278 LEVLEDMAMEGCYPDIITYNSLVSFTAKQGV 308
+++ +M G P TY + + +G+
Sbjct: 374 RDLVVEMVEAGLVPREYTYKLVCDALSSEGL 404
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 113/293 (38%), Gaps = 17/293 (5%)
Query: 189 ITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTI---IRGMFDKGNFNEAVSF 245
ITC + L K K D + +S + +T +I ++ + ++G EA++
Sbjct: 128 ITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALAT 187
Query: 246 WKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCY--PDIITYNSLVSFT 303
+ C P + Y +I +CR +A +L+ M + G PD TY L+S
Sbjct: 188 FYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSY 247
Query: 304 AKQGVYE-----------ETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLE 352
+ G+ E + +L RG P+ VTYN LI ++ E
Sbjct: 248 CRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFE 307
Query: 353 IMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVS-ESCFPDIVTYNTLLSGLCKE 411
M P +VTYN + + ++ AI + TM P TY L+ L +
Sbjct: 308 DMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVET 367
Query: 412 GFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGI 464
E L+ + P TY + D L+ G + E + + +GI
Sbjct: 368 RRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLASTLDEELHKRMREGI 420
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%)
Query: 286 MEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWD 345
M G PD+ TYN ++ + G +Y +++ + +G++PN+ ++ +I + D
Sbjct: 180 MYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSD 239
Query: 346 GVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLL 405
V VL +M + TYNI + LCK A +L M+S P+ VTY+ L+
Sbjct: 240 EVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLI 299
Query: 406 SGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIV 465
G C E +E +L ++ C P Y I L + G E+A L E + K V
Sbjct: 300 HGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWV 359
Query: 466 PDEITHSSLAWGFCGVDQLEEAMELLKEMHKK 497
P SL G ++EEA EL+ ++ +K
Sbjct: 360 PSFSIMKSLVNGLAKDSKVEEAKELIGQVKEK 391
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 139/347 (40%), Gaps = 31/347 (8%)
Query: 135 MAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMV 194
+A + +E +A K HF + +NL+ G I+ PD+ +
Sbjct: 81 IAFSAAVENLAEKK---HFSAVSNLLDGFIE------------------NRPDLKSERFA 119
Query: 195 IGGL---CKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLR 251
+ + L ++ + D+ S + N ++ ++ EA + + +
Sbjct: 120 AHAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPK 179
Query: 252 K-GCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYE 310
G P L TY +I++ C A + ++ +M +G P+ ++ ++S + +
Sbjct: 180 MYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSD 239
Query: 311 ETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIML 370
E V++ + RG+ TYN I SL +L+ M P VTY+ ++
Sbjct: 240 EVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLI 299
Query: 371 NGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCS 430
+G C + A L+ MV+ C PD Y TL+ LCK G + + L N
Sbjct: 300 HGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWV 359
Query: 431 PGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWG 477
P ++GLA+ +E AKEL G V ++ T + W
Sbjct: 360 PSFSIMKSLVNGLAKDSKVEEAKELI------GQVKEKFTRNVELWN 400
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 93/200 (46%)
Query: 361 PTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQL 420
P TYN M+ C+SG + S+ + M + P+ ++ ++SG E DE ++
Sbjct: 185 PDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKV 244
Query: 421 LYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCG 480
L ++ + G+ TYNI I L + + AK L M+ G+ P+ +T+S L GFC
Sbjct: 245 LAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCN 304
Query: 481 VDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKI 540
D EEA +L K M + K Y +I LCK + A+ + P I
Sbjct: 305 EDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSI 364
Query: 541 YDALIKAVADSGMVKEANDL 560
+L+ +A V+EA +L
Sbjct: 365 MKSLVNGLAKDSKVEEAKEL 384
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T N++++ C G ++ ++ M RK P+ S +I G + D+ K++ +M
Sbjct: 189 TYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMM 248
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
G V T N+ I LCKR K A L++ M +G P+ +TY+ +I G ++ +F
Sbjct: 249 KDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDF 308
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSL 299
EA +K + +GC P Y LI +C+ AL + ++ + P SL
Sbjct: 309 EEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSL 368
Query: 300 VSFTAKQGVYEETYLVI 316
V+ AK EE +I
Sbjct: 369 VNGLAKDSKVEEAKELI 385
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 104/241 (43%), Gaps = 6/241 (2%)
Query: 329 VTYNTLIHSLSSHGYWDGVDDVLE--IMNETSSPPTR-VTYNIMLNGLCKSGLLDRAISL 385
+ ++ + +L+ ++ V ++L+ I N R + I+L ++ +LD ++ +
Sbjct: 81 IAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVL--YAQANMLDHSLRV 138
Query: 386 YSTMVSESCFPDIVTYNTLLSG-LCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLA 444
+ + + + N LL L + + + + + P L TYN I
Sbjct: 139 FRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFC 198
Query: 445 RMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHT 504
GS S+ + +EM KGI P+ + + GF D+ +E ++L M + I +
Sbjct: 199 ESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVS 258
Query: 505 AYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
Y I LCK++K A LD M+ + KP+ Y LI + +EA L + +
Sbjct: 259 TYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIM 318
Query: 565 I 565
+
Sbjct: 319 V 319
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 99/476 (20%), Positives = 210/476 (44%), Gaps = 58/476 (12%)
Query: 128 LCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPD 187
L RGR++ A + +AR ++I L+ ++ G++ K+ + M D
Sbjct: 31 LFCRGRVLHAHLVTSGIARLTRI-----AAKLVTFYVECGKVLDARKVFDEMPKR----D 81
Query: 188 VITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTII---RGMFDKGNFNEAVS 244
+ C ++IG + GY + ++D +M G DA +++ R + D+ F + +
Sbjct: 82 ISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDR-EFGKMIH 140
Query: 245 FWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTA 304
+ +++ + LI++ ++ A +V D+ + D++ +N+++S A
Sbjct: 141 CLVLKFSYESDAFIV--SSLIDMYSKFGEVGNARKVFSDLGEQ----DLVVFNAMISGYA 194
Query: 305 KQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRV 364
+E ++ ++ G++P+ +T+N LI S + V ++LE+M P V
Sbjct: 195 NNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVV 254
Query: 365 TYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLL------------------- 405
++ +++GL + ++A + M++ +P+ T TLL
Sbjct: 255 SWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYS 314
Query: 406 --SGLCKEGFVDEGIQLLY----------LLTGTNCSPGLVTYNIAIDGLARMGSMESAK 453
+GL GFV + +Y +L VT+N I A G + A
Sbjct: 315 VVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAV 374
Query: 454 ELYSEMIGKGIVPDEITHSSL--AWGFCGVDQLEEAMELL-KEMHKKDEKIKHTAYRCVI 510
EL+ +M G D +T +++ A G+ L + + LL + ++ +++H Y C++
Sbjct: 375 ELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEH--YACMV 432
Query: 511 LGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
L + K+ ++A +++ R +PD ++ AL+ A + G ++ A + L E
Sbjct: 433 DLLGRAGKL---VEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAE 485
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 130/326 (39%), Gaps = 15/326 (4%)
Query: 159 LIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSG 218
+I G Q D+ ++ M + G PDVIT N +I G + +++E M L G
Sbjct: 189 MISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDG 248
Query: 219 CSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRAL 278
PD +++ +II G+ +A +K L G P T L+
Sbjct: 249 YKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGK 308
Query: 279 EVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSL 338
E+ + G ++L+ K G E + L + + VT+N++I
Sbjct: 309 EIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMI----LFRKTPKKTTVTFNSMIFCY 364
Query: 339 SSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSE-SCFPD 397
++HG D ++ + M T +T+ +L +GL D +L+ M ++ P
Sbjct: 365 ANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPR 424
Query: 398 IVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAK---- 453
+ Y ++ L + G + E + ++ P L + + G+ME A+
Sbjct: 425 LEHYACMVDLLGRAGKLVEAYE---MIKAMRMEPDLFVWGALLAACRNHGNMELARIAAK 481
Query: 454 ---ELYSEMIGKGIVPDEITHSSLAW 476
EL E G G++ + ++ +W
Sbjct: 482 HLAELEPENSGNGLLLTSLYANAGSW 507
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 123/274 (44%), Gaps = 14/274 (5%)
Query: 200 KRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRK-GCPPYL 258
K G K A+D +M L GC ++N ++ + + + F D K G
Sbjct: 118 KAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDA 177
Query: 259 ITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISN 318
+++ + I+ C A + +M G PD++TY +L+S +Y+ VI N
Sbjct: 178 VSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLIS-----ALYKHERCVIGN 232
Query: 319 -----LLSRGMQPNAVTYNTLIHSL-SSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNG 372
++ +G +PN T+N I L + WD +D+L +M + P +TYN+++ G
Sbjct: 233 GLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDA-NDLLLLMPKLQVEPDSITYNMVIKG 291
Query: 373 LCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPG 432
+ D A +Y+ M + P++ Y T++ LCK G D + P
Sbjct: 292 FFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPN 351
Query: 433 LVTYNIAIDGLARMGSMESAKELYSEMIGKGIVP 466
L T + + GL + G ++ AK + E++ + + P
Sbjct: 352 LDTVEMLLKGLVKKGQLDQAKSI-MELVHRRVPP 384
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 92/201 (45%), Gaps = 4/201 (1%)
Query: 187 DVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFW 246
D ++ N+ I C+ G L A + +M SG +PD +TY T+I ++ W
Sbjct: 176 DAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLW 235
Query: 247 KDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVS--FTA 304
+ KGC P L T+ V I+ + A A ++L M PD ITYN ++ F A
Sbjct: 236 NLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLA 295
Query: 305 KQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRV 364
+ E V + + +G +PN Y T+IH L G +D + + P
Sbjct: 296 RFPDMAER--VYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLD 353
Query: 365 TYNIMLNGLCKSGLLDRAISL 385
T ++L GL K G LD+A S+
Sbjct: 354 TVEMLLKGLVKKGQLDQAKSI 374
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 116/278 (41%), Gaps = 11/278 (3%)
Query: 299 LVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSS----HGYWDGVDDVLEIM 354
++ K G+ ++ N+ G + + ++N + LS H W+ + D
Sbjct: 112 IIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDA---P 168
Query: 355 NETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFV 414
++ V++NI + C+ G+LD A M PD+VTY TL+S L K
Sbjct: 169 SKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERC 228
Query: 415 DEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSL 474
G L L+ C P L T+N+ I L A +L M + PD IT++ +
Sbjct: 229 VIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMV 288
Query: 475 AWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRC 534
GF + A + MH K K Y+ +I LCK D+A +R +
Sbjct: 289 IKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKW 348
Query: 535 KPDEKIYDALIKAVADSGMVKEANDL----HQRLIEWK 568
P+ + L+K + G + +A + H+R+ ++
Sbjct: 349 YPNLDTVEMLLKGLVKKGQLDQAKSIMELVHRRVPPFR 386
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 117/264 (44%), Gaps = 6/264 (2%)
Query: 276 RALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSR-GMQPNAVTYNTL 334
+AL+ +M + GC + ++N+ + + + + + S+ G+ +AV++N
Sbjct: 124 QALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIA 183
Query: 335 IHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESC 394
I S G DG + M ++ P VTY +++ L K L++ MV + C
Sbjct: 184 IKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGC 243
Query: 395 FPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDG--LARMGSMESA 452
P++ T+N + L + LL L+ P +TYN+ I G LAR M A
Sbjct: 244 KPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDM--A 301
Query: 453 KELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILG 512
+ +Y+ M GKG P+ + ++ C + A + K+ +K ++ G
Sbjct: 302 ERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKG 361
Query: 513 LCKQRKVDIAIQALDLMVRSRCKP 536
L K+ ++D A ++L V R P
Sbjct: 362 LVKKGQLDQAKSIMEL-VHRRVPP 384
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 1/210 (0%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D + N +++ C G L A + M + P + T LI L K + G +
Sbjct: 176 DAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLW 235
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
N+MV+ G P++ T N+ I L R A DL+ M PD+ITYN +I+G F
Sbjct: 236 NLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLA 295
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
+ A + KG P L Y +I +C+ A + +D + YP++ T
Sbjct: 296 RFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTV 355
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQP 326
L+ K+G ++ ++ L+ R + P
Sbjct: 356 EMLLKGLVKKGQLDQAKSIME-LVHRRVPP 384
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 125/288 (43%), Gaps = 2/288 (0%)
Query: 159 LIRGLIKIGQIDKGCKIINIMVMSGG-VPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLS 217
++R +K G +++ C ++ IM VPDV ++ K L + S
Sbjct: 599 VVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKS 658
Query: 218 GCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRA 277
G + YN +I +E +++ +R G P +T+ VL+++ + +
Sbjct: 659 GIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGK-AKLFKK 717
Query: 278 LEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHS 337
+ L +A D+I+YN++++ K Y I N+ G + YNTL+ +
Sbjct: 718 VNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDA 777
Query: 338 LSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPD 397
+ +L+ M +++S P TYNIM+N + G +D + + PD
Sbjct: 778 YGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPD 837
Query: 398 IVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLAR 445
+ +YNTL+ G V+E + L+ + G N P VTY + L R
Sbjct: 838 LCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRR 885
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 147/329 (44%), Gaps = 10/329 (3%)
Query: 166 IGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDM-SLSGCSPDAI 224
+G+ + K+ + SG V D I ++V+ K G L+ A ++E M PD
Sbjct: 571 MGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVY 630
Query: 225 TYNTIIRGMFDKGNFNEAVSFWKDQLRK-GCPPYLITYTVLIELVCRYCGAIRALEVLED 283
+ ++R ++ K + + + ++RK G Y +I R E+
Sbjct: 631 LFRDMLR-IYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEE 689
Query: 284 MAMEGCYPDIITYNSLVSFTAKQGVYE---ETYLVISNLLSRGMQPNAVTYNTLIHSLSS 340
M G P+ +T+N L+ K +++ E +L L R + ++YNT+I +
Sbjct: 690 MIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFL----LAKRHGVVDVISYNTIIAAYGK 745
Query: 341 HGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVT 400
+ + + ++ M + YN +L+ K +++ S+ M + PD T
Sbjct: 746 NKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYT 805
Query: 401 YNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMI 460
YN +++ ++G++DE +L L + P L +YN I G +E A L EM
Sbjct: 806 YNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMR 865
Query: 461 GKGIVPDEITHSSLAWGFCGVDQLEEAME 489
G+ I+PD++T+++L D+ EA++
Sbjct: 866 GRNIIPDKVTYTNLVTALRRNDEFLEAIK 894
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/441 (21%), Positives = 182/441 (41%), Gaps = 15/441 (3%)
Query: 128 LCTRGRLM-AAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVP 186
+ TR RL A +I++M + + ++ + G+++ I+ M +G P
Sbjct: 288 IYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSP 347
Query: 187 DVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFW 246
++I N +I G K +++A L + G PD +Y ++I G N+ EA ++
Sbjct: 348 NIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYY 407
Query: 247 KDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGC-YPDIITYNSLVSFTAK 305
++ R G P LI L +Y A++ +EDM GC Y I+ ++ K
Sbjct: 408 QELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSIL--GIILQAYEK 465
Query: 306 QGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETS---SPPT 362
G + V+ ++ N ++++L+ + HG VDD L ++ E S
Sbjct: 466 VGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGM---VDDCLGLLREKKWRDSAFE 522
Query: 363 RVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLY 422
Y++++ +SG L A+ +Y+ + ++ +T++ G E +L
Sbjct: 523 SHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYL 582
Query: 423 LLTGTNCSPGLVTYNIAIDGLARMGSMESA---KELYSEMIGKGIVPDEITHSSLAWGFC 479
L + + ++I + + GS+E A E+ E K IVPD + +
Sbjct: 583 NLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQ--KDIVPDVYLFRDMLRIYQ 640
Query: 480 GVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEK 539
D ++ L + K Y CVI + +D + M+R P+
Sbjct: 641 KCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTV 700
Query: 540 IYDALIKAVADSGMVKEANDL 560
++ L+ + + K+ N+L
Sbjct: 701 TFNVLLDVYGKAKLFKKVNEL 721
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 148/346 (42%), Gaps = 13/346 (3%)
Query: 167 GQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITY 226
GQ+ KI N + S ++ + +I G A L ++ SG D I +
Sbjct: 537 GQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGF 596
Query: 227 NTIIRGMFDKGNFNEAVSFWK--DQLRKGCPP-YLITYTVLIELVCRYCGAIRALEVLED 283
+ ++R G+ EA S + D+ + P YL + I C ++ L
Sbjct: 597 SIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHL--YYR 654
Query: 284 MAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGY 343
+ G + + YN +++ A+ +E ++ G PN VT+N L+
Sbjct: 655 IRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKL 714
Query: 344 WDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNT 403
+ V+++ ++ + ++YN ++ K+ S M + + YNT
Sbjct: 715 FKKVNELF-LLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNT 773
Query: 404 LLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKG 463
LL K+ +++ +L + + P TYNI I+ G ++ ++ E+ G
Sbjct: 774 LLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESG 833
Query: 464 IVPDEITHSSL--AWGFCGVDQLEEAMELLKEMHKKD---EKIKHT 504
+ PD ++++L A+G G+ +EEA+ L+KEM ++ +K+ +T
Sbjct: 834 LGPDLCSYNTLIKAYGIGGM--VEEAVGLVKEMRGRNIIPDKVTYT 877
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 143/344 (41%), Gaps = 23/344 (6%)
Query: 224 ITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELV--CRYCGAIRALEVL 281
+ Y+ I+R + + ++ A K+ G + +Y V ++ C G ++
Sbjct: 175 VAYSLILRVLGRREEWDRAEDLIKELC--GFHEFQKSYQVFNTVIYACTKKGNVKLASKW 232
Query: 282 EDMAME-GCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSS 340
M +E G P++ T L+ K EE S++ G+ + Y+++I +
Sbjct: 233 FHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCES-AYSSMITIYTR 291
Query: 341 HGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVT 400
+D ++V+++M + + +MLN + G ++ A S+ +M + P+I+
Sbjct: 292 LRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIA 351
Query: 401 YNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMI 460
YNTL++G K ++ L + L P +Y I+G R + E AK Y E+
Sbjct: 352 YNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELK 411
Query: 461 GKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRC---VILGLCKQR 517
G P+ +L + A++ +++M T C ILG+ Q
Sbjct: 412 RCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDM---------TGIGCQYSSILGIILQA 462
Query: 518 -----KVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKE 556
K+D+ L + + ++ + +L+ A GMV +
Sbjct: 463 YEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDD 506
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 79/433 (18%), Positives = 166/433 (38%), Gaps = 20/433 (4%)
Query: 132 GRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITC 191
G +A + ++ ++ R+ + + +LI+ L + K ++ N
Sbjct: 172 GNFVAYSLILRVLGRREE---WDRAEDLIKELCGFHEFQKSYQVFNT------------- 215
Query: 192 NMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLR 251
VI K+G +K A M G P+ T ++ G++ K E F +R
Sbjct: 216 --VIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLM-GLYQKNWNVEEAEFAFSHMR 272
Query: 252 KGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEE 311
K Y+ +I + R +A EV++ M + + + +++ ++QG E
Sbjct: 273 KFGIVCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMEL 332
Query: 312 TYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLN 371
++ ++ + G PN + YNTLI + + + P +Y M+
Sbjct: 333 AESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIE 392
Query: 372 GLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSP 431
G ++ + A Y + P+ TL++ K G D I+ + +TG C
Sbjct: 393 GWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQY 452
Query: 432 GLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELL 491
+ I + ++G ++ + I ++ + SSL + +++ + LL
Sbjct: 453 SSIL-GIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLL 511
Query: 492 KEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADS 551
+E +D + Y +I + ++ A++ + + S + + I +I
Sbjct: 512 REKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVM 571
Query: 552 GMVKEANDLHQRL 564
G EA L+ L
Sbjct: 572 GEFSEAEKLYLNL 584
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/405 (19%), Positives = 156/405 (38%), Gaps = 12/405 (2%)
Query: 159 LIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNM-----VIGGLCKRGYLKSAVDLVED 213
+++ K+G+ID + V+ G + I N ++ K G + + L+ +
Sbjct: 459 ILQAYEKVGKID-----VVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLRE 513
Query: 214 MSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCG 273
+ ++ Y+ +I + G +AV + ++ L + +I++
Sbjct: 514 KKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGE 573
Query: 274 AIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNL-LSRGMQPNAVTYN 332
A ++ ++ G D I ++ +V K G EE V+ + + + P+ +
Sbjct: 574 FSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFR 633
Query: 333 TLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSE 392
++ D + + + ++ + YN ++N ++ LD + M+
Sbjct: 634 DMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRY 693
Query: 393 SCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESA 452
P+ VT+N LL K + + L+LL + +++YN I + +
Sbjct: 694 GFTPNTVTFNVLLDVYGKAKLFKK-VNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNM 752
Query: 453 KELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILG 512
M G +++L + Q+E+ +LK M K H Y +I
Sbjct: 753 SSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINI 812
Query: 513 LCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
+Q +D L + S PD Y+ LIKA GMV+EA
Sbjct: 813 YGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEA 857
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 107/271 (39%), Gaps = 2/271 (0%)
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
++++ G + E + NL S G+ + + ++ ++ G + VLEIM+E
Sbjct: 562 STMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDE 621
Query: 357 TSS-PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVD 415
P + ML K L D+ LY + + YN +++ + +D
Sbjct: 622 QKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLD 681
Query: 416 EGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLA 475
E + +P VT+N+ +D + + EL+ G+V D I+++++
Sbjct: 682 ELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVV-DVISYNTII 740
Query: 476 WGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCK 535
+ +K M + AY ++ K ++++ L M +S
Sbjct: 741 AAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSG 800
Query: 536 PDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
PD Y+ +I + G + E D+ + L E
Sbjct: 801 PDHYTYNIMINIYGEQGWIDEVADVLKELKE 831
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 179/443 (40%), Gaps = 58/443 (13%)
Query: 118 GFTNNKILQ-NLCTRGRLMAAARLIEIMARKSQIPH-FPSCTNLIRGLIKIGQIDKGCKI 175
GFT ++ + LC R + R R S H SC+ LI L + +I
Sbjct: 68 GFTPSQFSEITLCLRNNPHLSLRFFLFTRRYSLCSHDTHSCSTLIHILSRSRLKSHASEI 127
Query: 176 INIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFD 235
I + + + + LK L++ + G +P ++ +I+ D
Sbjct: 128 IRLALRLAATDED-----------EDRVLKVFRSLIKSYNRCGSAP--FVFDLLIKSCLD 174
Query: 236 KGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIIT 295
+ AV + +G + T LI V R GA ++ Y ++
Sbjct: 175 SKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKM---------YREVFG 225
Query: 296 YNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVL-EIM 354
+ + AK+ + + ++PNA T+N+++ S G + V+ + E+
Sbjct: 226 LDDVSVDEAKKMIGK-------------IKPNATTFNSMMVSFYREGETEMVERIWREME 272
Query: 355 NETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLC----- 409
E P +YN+++ C GL+ A ++ M DIV YNT++ GLC
Sbjct: 273 EEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEV 332
Query: 410 ---KEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVP 466
KE F D G L G C+ +TY ++G + G ++S +Y EM KG
Sbjct: 333 VKAKELFRDMG------LKGIECT--CLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEA 384
Query: 467 DEITHSSLAWGFCGV---DQLEEAMELLKEMHKKDEKI-KHTAYRCVILGLCKQRKVDIA 522
D +T +L G C ++ EA +++K+ ++ Y ++ LC+ K+D A
Sbjct: 385 DGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRA 444
Query: 523 IQALDLMVRSRCKPDEKIYDALI 545
+ MV KP ++ Y A I
Sbjct: 445 LNIQAEMVGKGFKPSQETYRAFI 467
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 103/227 (45%), Gaps = 5/227 (2%)
Query: 186 PDVITCNMVIGGLCKRGYLKSAVDLVEDMSLS-GCSPDAITYNTIIRGMFDKGNFNEAVS 244
P+ T N ++ + G + + +M GCSP+ +YN ++ +G +EA
Sbjct: 243 PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEK 302
Query: 245 FWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTA 304
W++ +G ++ Y +I +C ++A E+ DM ++G +TY LV+
Sbjct: 303 VWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYC 362
Query: 305 KQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSL----SSHGYWDGVDDVLEIMNETSSP 360
K G + +V + +G + + +T L+ L + D V + + E
Sbjct: 363 KAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFY 422
Query: 361 PTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSG 407
P+R Y +++ LC+ G +DRA+++ + MV + P TY + G
Sbjct: 423 PSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDG 469
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 134/319 (42%), Gaps = 18/319 (5%)
Query: 159 LIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKR-----GY-LKSAVDLVE 212
LI+ + +ID ++ + G + TCN +I + +R GY + V ++
Sbjct: 168 LIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVFGLD 227
Query: 213 DMSLSGCS-------PDAITYNTIIRGMFDKGNFNEAVSFWKDQLRK-GCPPYLITYTVL 264
D+S+ P+A T+N+++ + +G W++ + GC P + +Y VL
Sbjct: 228 DVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVL 287
Query: 265 IELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGM 324
+E C A +V E+M + G DI+ YN+++ + + ++ +G+
Sbjct: 288 MEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGI 347
Query: 325 QPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDR--- 381
+ +TY L++ G D V M +T ++ GLC R
Sbjct: 348 ECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVE 407
Query: 382 AISLYSTMVSESCF-PDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAI 440
A + V E+ F P Y L+ LC++G +D + + + G P TY I
Sbjct: 408 AADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFI 467
Query: 441 DGLARMGSMESAKELYSEM 459
DG +G E++ L EM
Sbjct: 468 DGYGIVGDEETSALLAIEM 486
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 120/272 (44%), Gaps = 22/272 (8%)
Query: 314 LVISNLLSRGMQPNAVTYNTLIHSLS-----SHGY-----WDGVDDVLEIMNETSS---- 359
+V+ L SRG+ T N LI +S S+GY G+DDV ++E
Sbjct: 183 MVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVFGLDDV--SVDEAKKMIGK 240
Query: 360 -PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSE-SCFPDIVTYNTLLSGLCKEGFVDEG 417
P T+N M+ + G + ++ M E C P++ +YN L+ C G + E
Sbjct: 241 IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEA 300
Query: 418 IQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWG 477
++ + +V YN I GL + AKEL+ +M KGI +T+ L G
Sbjct: 301 EKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNG 360
Query: 478 FCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLM---VR-SR 533
+C ++ + + +EM +K + ++ GLC R ++A D++ VR +
Sbjct: 361 YCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAM 420
Query: 534 CKPDEKIYDALIKAVADSGMVKEANDLHQRLI 565
P Y+ L+K + + G + A ++ ++
Sbjct: 421 FYPSRNCYELLVKRLCEDGKMDRALNIQAEMV 452
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 106/256 (41%), Gaps = 14/256 (5%)
Query: 85 HEDWGLESFERRESGELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIM 144
E +GL+ E+ +++ KP + T N ++ + G R+ M
Sbjct: 221 REVFGLDDVSVDEAKKMIGKIKP---------NATTFNSMMVSFYREGETEMVERIWREM 271
Query: 145 ARKSQI-PHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGY 203
+ P+ S L+ G + + K+ M + G V D++ N +IGGLC
Sbjct: 272 EEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFE 331
Query: 204 LKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTV 263
+ A +L DM L G +TY ++ G G+ + + +++ RKG +T
Sbjct: 332 VVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEA 391
Query: 264 LIELVCRYCGAIRALE---VLEDMAMEGC-YPDIITYNSLVSFTAKQGVYEETYLVISNL 319
L+E +C R +E +++D E YP Y LV + G + + + +
Sbjct: 392 LVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEM 451
Query: 320 LSRGMQPNAVTYNTLI 335
+ +G +P+ TY I
Sbjct: 452 VGKGFKPSQETYRAFI 467
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 13/200 (6%)
Query: 292 DIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVL 351
D YN ++ K G ++E + +NLL G+QP+ TYN +I SS G + +
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FSSLGRAEKL--YA 69
Query: 352 EIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKE 411
E++ P T +TYN M++GLCK L +A VS+SC T+NTL++G CK
Sbjct: 70 EMIRRGLVPDT-ITYNSMIHGLCKQNKLAQA-----RKVSKSC----STFNTLINGYCKA 119
Query: 412 GFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITH 471
V +G+ L + ++TY I G ++G +A +++ EM+ G+ IT
Sbjct: 120 TRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITF 179
Query: 472 SSLAWGFCGVDQLEEAMELL 491
+ C +L +A+ +L
Sbjct: 180 RDILPQLCSRKELRKAVAML 199
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 13/203 (6%)
Query: 324 MQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAI 383
M + YN +IH L G +D ++ + + P TYN+M+ + L RA
Sbjct: 10 MDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAE 65
Query: 384 SLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGL 443
LY+ M+ PD +TYN+++ GLCK+ + + ++ +CS T+N I+G
Sbjct: 66 KLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV-----SKSCS----TFNTLINGY 116
Query: 444 ARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKH 503
+ ++ L+ EM +GIV + IT+++L GF V A+++ +EM
Sbjct: 117 CKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSS 176
Query: 504 TAYRCVILGLCKQRKVDIAIQAL 526
+R ++ LC ++++ A+ L
Sbjct: 177 ITFRDILPQLCSRKELRKAVAML 199
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 187 DVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFW 246
D N++I GLCK G A ++ ++ +SG PD TYN +IR + A +
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRF----SSLGRAEKLY 68
Query: 247 KDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQ 306
+ +R+G P ITY +I +C+ +A +V + + T+N+L++ K
Sbjct: 69 AEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCS---------TFNTLINGYCKA 119
Query: 307 GVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTY 366
++ + + RG+ N +TY TLIH G ++ D+ + M + +T+
Sbjct: 120 TRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITF 179
Query: 367 NIMLNGLCKSGLLDRAISLY---STMVSES 393
+L LC L +A+++ S+MVS +
Sbjct: 180 RDILPQLCSRKELRKAVAMLLQKSSMVSNN 209
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 13/190 (6%)
Query: 385 LYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLA 444
++ M + D YN ++ GLCK G DE + L + P + TYN+ I
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 445 RMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHT 504
R S+ A++LY+EMI +G+VPD IT++S+ G C ++L +A ++ K +
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSC---------S 107
Query: 505 AYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
+ +I G CK +V + M R + Y LI G A D+ Q +
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 565 IEWKILKTEI 574
+ + + I
Sbjct: 168 VSNGVYSSSI 177
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 214 MSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCG 273
M S D YN II G+ G F+EA + + + L G P + TY ++I R+
Sbjct: 5 MRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSS 60
Query: 274 AIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNT 333
RA ++ +M G PD ITYNS++ KQ + +R + + T+NT
Sbjct: 61 LGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQ---------ARKVSKSCSTFNT 111
Query: 334 LIHSL-SSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSE 392
LI+ + DG++ E M +TY +++G + G + A+ ++ MVS
Sbjct: 112 LINGYCKATRVKDGMNLFCE-MYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSN 170
Query: 393 SCFPDIVTYNTLLSGLCKEGFVDEGIQLL 421
+ +T+ +L LC + + + +L
Sbjct: 171 GVYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 71/174 (40%), Gaps = 30/174 (17%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N I+ LC G+ A + + P + +IR + + K+ M+
Sbjct: 18 NIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR----FSSLGRAEKLYAEMIR 73
Query: 182 SGGVPDVITCNMVIGGLCKR---------------------GY-----LKSAVDLVEDMS 215
G VPD IT N +I GLCK+ GY +K ++L +M
Sbjct: 74 RGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCSTFNTLINGYCKATRVKDGMNLFCEMY 133
Query: 216 LSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVC 269
G + ITY T+I G G+FN A+ +++ + G IT+ ++ +C
Sbjct: 134 RRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLC 187
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 115/240 (47%), Gaps = 5/240 (2%)
Query: 260 TYTVLIELVCRYCGAIRALE-VLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISN 318
++ +++ C G+ R E V +M G D+++Y+S++S +K G + +
Sbjct: 268 SFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDR 327
Query: 319 LLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS-PPTRVTYNIMLNGLCKSG 377
+ ++P+ YN ++H+L+ + ++++ M E P VTYN ++ LCK+
Sbjct: 328 MKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKAR 387
Query: 378 LLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYN 437
+ A ++ M+ + FP I TY+ + L + G +E +LL + C P + TY
Sbjct: 388 KTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL-RTG--EEVFELLAKMRKMGCEPTVETYI 444
Query: 438 IAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKK 497
+ I L R ++ L+ EM K + PD ++ + G ++EEA KEM K
Sbjct: 445 MLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDK 504
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 117/267 (43%), Gaps = 5/267 (1%)
Query: 222 DAITYNTIIRGMFDK-GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEV 280
DA ++N ++ G + G+ EA W + G +++Y+ +I + + L++
Sbjct: 265 DAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKL 324
Query: 281 LEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLS-RGMQPNAVTYNTLIHSLS 339
+ M E PD YN++V AK E ++ + +G++PN VTYN+LI L
Sbjct: 325 FDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLC 384
Query: 340 SHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIV 399
+ V + M E PT TY+ + L ++G + L + M C P +
Sbjct: 385 KARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL-RTG--EEVFELLAKMRKMGCEPTVE 441
Query: 400 TYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEM 459
TY L+ LC+ D + L + P L +Y + I GL G +E A Y EM
Sbjct: 442 TYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEM 501
Query: 460 IGKGIVPDEITHSSLAWGFCGVDQLEE 486
KG+ P+E + F G E+
Sbjct: 502 KDKGMRPNENVEDMIQSWFSGKQYAEQ 528
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 145/328 (44%), Gaps = 22/328 (6%)
Query: 248 DQLRKGCPPYLITYTVLIELVCRYCG------AIRALEVLEDMAMEGCYPDIITYNSLVS 301
D++RK P + + T+LI ++ +YC AI + +E D + SL+S
Sbjct: 185 DEMRKFSPSLVNSQTLLI-MIRKYCAVHDVGKAINTFHAYKRFKLEMGIDD---FQSLLS 240
Query: 302 FTAK-QGVYEETYLVISNLLSRGMQP-NAVTYNTLIHSLSSH-GYWDGVDDVLEIMNETS 358
+ + V + +L+ N + P +A ++N +++ + G + V M
Sbjct: 241 ALCRYKNVSDAGHLIFCN---KDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVG 297
Query: 359 SPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGI 418
V+Y+ M++ K G L++ + L+ M E PD YN ++ L K FV E
Sbjct: 298 VKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEAR 357
Query: 419 QLLYLLTGTN-CSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWG 477
L+ + P +VTYN I L + E AK+++ EM+ KG+ P T+ +
Sbjct: 358 NLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHA---- 413
Query: 478 FCGVDQL-EEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKP 536
F + + EE ELL +M K + Y +I LC+ R D + D M P
Sbjct: 414 FMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGP 473
Query: 537 DEKIYDALIKAVADSGMVKEANDLHQRL 564
D Y +I + +G ++EA ++ +
Sbjct: 474 DLSSYIVMIHGLFLNGKIEEAYGYYKEM 501
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 130/298 (43%), Gaps = 8/298 (2%)
Query: 124 ILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLI-RGLIK-IGQIDKGCKIINIMVM 181
+L LC + A LI K + P N++ G IG + ++ M
Sbjct: 238 LLSALCRYKNVSDAGHLI--FCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGN 295
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
G DV++ + +I K G L + L + M PD YN ++ + +E
Sbjct: 296 VGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSE 355
Query: 242 AVSFWKD-QLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLV 300
A + K + KG P ++TY LI+ +C+ A +V ++M +G +P I TY++ +
Sbjct: 356 ARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFM 415
Query: 301 SFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSP 360
+ G EE + +++ + G +P TY LI L +D V + + M E +
Sbjct: 416 RIL-RTG--EEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVG 472
Query: 361 PTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGI 418
P +Y +M++GL +G ++ A Y M + P+ + + S + + ++ I
Sbjct: 473 PDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWFSGKQYAEQRI 530
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 114/228 (50%), Gaps = 1/228 (0%)
Query: 262 TVLIELVCRYCGAIRALEVLEDMAM-EGCYPDIITYNSLVSFTAKQGVYEETYLVISNLL 320
TV++ ++C RA E++E+M + +G +I+T+ S++ K+ +EE LV+ +
Sbjct: 214 TVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWDFEELDLVLKLME 273
Query: 321 SRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLD 380
+ + +Y LI +S+G + + ++ +M++ YN+++NG + GL++
Sbjct: 274 KESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVE 333
Query: 381 RAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAI 440
+ I LYS M S P+ TY L++GLCK G V E + L L Y+
Sbjct: 334 KVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLS 393
Query: 441 DGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAM 488
+ R+G ++ + E+ +EMI G +P LA V++ E M
Sbjct: 394 EECYRVGMIDKSLEVVAEMIRDGFIPGATICERLADSLFEVNRKEAQM 441
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 86/188 (45%), Gaps = 4/188 (2%)
Query: 364 VTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYL 423
VT+ M+ K + + M ES D+ +Y L+ G G V+E +L+ +
Sbjct: 247 VTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLM 306
Query: 424 LTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQ 483
+ YN+ ++G +R G +E ELYSEM +G+ P++ T+ L G C +
Sbjct: 307 MHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGK 366
Query: 484 LEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPD----EK 539
+ EAM L E+ + +I Y + + +D +++ + M+R P E+
Sbjct: 367 VCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICER 426
Query: 540 IYDALIKA 547
+ D+L +
Sbjct: 427 LADSLFEV 434
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 156/360 (43%), Gaps = 21/360 (5%)
Query: 210 LVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVC 269
++E+ SL PD T+ ++ + + F S+ K+ L+ V I+ +
Sbjct: 71 ILENPSLFSFQPDLRTHLSLTFRVLSERRF----SYAKELLK----------PVAIDDIL 116
Query: 270 RYCGAIRALEVLEDMAMEGCYPDII--TYNSLVSFTAKQGVYEETYLVISNLLSRGMQPN 327
RY + V+++ GC ++ +NS++ + G + E V + + ++ +
Sbjct: 117 RYPFNVIVSSVIDEC---GCEKKVVGRFFNSMIMVYSDNGKFSEVVEVFEYMKNNEVKID 173
Query: 328 AVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRV-TYNIMLNGLCKSGLLDRAISLY 386
T + +L + D +M E+ V + +++ LC +G + RA L
Sbjct: 174 EKTCTLHLLNLKRCDQMELARDFFSLMVESGIDVVTVYSLTVVVTVLCCNGEITRARELV 233
Query: 387 STM-VSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLAR 445
M + + +IVT+ +++ K +E +L L+ + L +Y + IDG
Sbjct: 234 EEMGLVKGVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTS 293
Query: 446 MGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTA 505
G +E A+ L M K + + ++ + G+ +E+ +EL EM +
Sbjct: 294 YGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDT 353
Query: 506 YRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLI 565
Y ++ GLCK KV A+ L+ + + + DE++Y L + GM+ ++ ++ +I
Sbjct: 354 YWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMI 413
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/380 (21%), Positives = 163/380 (42%), Gaps = 53/380 (13%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
+GFT+N +++ A + M P S T +++ ++G +I
Sbjct: 104 NGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIH 163
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
+ + SG V DV N ++ + GY + A +++ M + DA+++N+++ +K
Sbjct: 164 GLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVR----DAVSWNSLLSAYLEK 219
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGA---IRALEVLEDMAMEGCYPDI 293
G +EA + + + + + ++ Y A A EV + M + D+
Sbjct: 220 GLVDEARALFDEMEERNVESWNF-------MISGYAAAGLVKEAKEVFDSMPVR----DV 268
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQ-PNAVTYNTLIHSLSS----------HG 342
+++N++V+ A G Y E V + +L + P+ T +++ + +S H
Sbjct: 269 VSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHV 328
Query: 343 YWD----------------------GVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLD 380
Y D +D LE+ TS T+N +++ L GL
Sbjct: 329 YIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVS-TWNSIISDLSVHGLGK 387
Query: 381 RAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGT-NCSPGLVTYNIA 439
A+ ++S MV E P+ +T+ +LS G +D+ +L +++ P + Y
Sbjct: 388 DALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCM 447
Query: 440 IDGLARMGSMESAKELYSEM 459
+D L RMG +E A+EL +E+
Sbjct: 448 VDLLGRMGKIEEAEELVNEI 467
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/346 (19%), Positives = 153/346 (44%), Gaps = 17/346 (4%)
Query: 220 SPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALE 279
SP+ T+N++IR + A++ +++ L P ++T +++ +CG +
Sbjct: 102 SPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQ 161
Query: 280 VLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLS 339
+ G D+ N+LV+ + G +E + +L R +AV++N+L+ +
Sbjct: 162 IHGLFIKSGLVTDVFVENTLVNVYGRSGYFE----IARKVLDRMPVRDAVSWNSLLSAYL 217
Query: 340 SHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIV 399
G D + + M E + ++N M++G +GL+ A ++ +M D+V
Sbjct: 218 EKGLVDEARALFDEMEERNVE----SWNFMISGYAAAGLVKEAKEVFDSMPVR----DVV 269
Query: 400 TYNTLLSGLCKEGFVDEGIQLL-YLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSE 458
++N +++ G +E +++ +L + P T + A +GS+ + ++
Sbjct: 270 SWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVY 329
Query: 459 MIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRK 518
+ GI + ++L + ++++A+E+ + K+D + + +I L
Sbjct: 330 IDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDV----STWNSIISDLSVHGL 385
Query: 519 VDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
A++ MV KP+ + ++ A GM+ +A L + +
Sbjct: 386 GKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMM 431
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 87/420 (20%), Positives = 174/420 (41%), Gaps = 56/420 (13%)
Query: 184 GVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAV 243
G P+ T N VI + A+ + +M L PD ++ +++ F E
Sbjct: 101 GSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGR 160
Query: 244 SFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFT 303
++ G + L+ + R A +VL+ M + D +++NSL+S
Sbjct: 161 QIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVR----DAVSWNSLLSAY 216
Query: 304 AKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTR 363
++G+ +E + + R N ++N +I ++ G +V + M P R
Sbjct: 217 LEKGLVDEARALFDEMEER----NVESWNFMISGYAAAGLVKEAKEVFDSM------PVR 266
Query: 364 --VTYNIMLNGLCKSGLLDRAISLYSTMVSESC-FPDIVTYNTLLS-------------- 406
V++N M+ G + + +++ M+ +S PD T ++LS
Sbjct: 267 DVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWV 326
Query: 407 -------GLCKEGFVDEGIQLLYLLTG----------TNCSPGLVTYNIAIDGLARMGSM 449
G+ EGF+ + +Y G + T+N I L+ G
Sbjct: 327 HVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLG 386
Query: 450 ESAKELYSEMIGKGIVPDEITHSSL--AWGFCG-VDQLEEAMELLKEMHKKDEKIKHTAY 506
+ A E++SEM+ +G P+ IT + A G +DQ + E++ +++ + I+H Y
Sbjct: 387 KDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEH--Y 444
Query: 507 RCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
C++ L + K++ +A +L+ + ++L+ A G +++A + RL+E
Sbjct: 445 GCMVDLLGRMGKIE---EAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLE 501
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 133/312 (42%), Gaps = 1/312 (0%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
DG T I+ +L GRL AA +L + M + P F ++L+ + K G++D K+
Sbjct: 312 DGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVY 371
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
M G P +I K G L +A+ L ++M SG P+ Y II
Sbjct: 372 MEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKS 431
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
G A++ +KD + G P TY+ L+E+ A+++ M G P + +Y
Sbjct: 432 GKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSY 491
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
SL++ A + + + ++ + + G + + L+ + D L M
Sbjct: 492 ISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMIYIKDASV-DLALKWLRFMGS 550
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDE 416
+ + K+GL D A L T+V + D+V Y ++L+ L + D+
Sbjct: 551 SGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILAHLVRCQDEDK 610
Query: 417 GIQLLYLLTGTN 428
QL+ +L+ T
Sbjct: 611 ERQLMSILSATK 622
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 120/276 (43%), Gaps = 3/276 (1%)
Query: 295 TYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIM 354
YN ++ + AK E + G + + TYN L+ + G ++ E M
Sbjct: 245 AYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESM 304
Query: 355 NETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFV 414
+T S TY +++ L KSG LD A L+ M P +++L+ + K G +
Sbjct: 305 EKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRL 364
Query: 415 DEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSL 474
D +++ + G P + ID A+ G +++A L+ EM G P+ ++ +
Sbjct: 365 DTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMI 424
Query: 475 AWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRC 534
+LE AM + K+M K + Y C++ +VD A++ + M +
Sbjct: 425 IESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGL 484
Query: 535 KPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKIL 570
+P Y +L+ +A+ +V A + L+E K +
Sbjct: 485 RPGLSSYISLLTLLANKRLVDVAGKI---LLEMKAM 517
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 114/259 (44%), Gaps = 4/259 (1%)
Query: 268 VCRYCGAIRALEV----LEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRG 323
V +Y LEV + GC D TYN+L+ +G+ + + + ++
Sbjct: 249 VIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTD 308
Query: 324 MQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAI 383
+ TY +I SL+ G D + + M E P+ ++ +++ + K+G LD ++
Sbjct: 309 SLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSM 368
Query: 384 SLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGL 443
+Y M P + +L+ K G +D ++L + + P Y + I+
Sbjct: 369 KVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESH 428
Query: 444 ARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKH 503
A+ G +E A ++ +M G +P T+S L G Q++ AM++ M +
Sbjct: 429 AKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGL 488
Query: 504 TAYRCVILGLCKQRKVDIA 522
++Y ++ L +R VD+A
Sbjct: 489 SSYISLLTLLANKRLVDVA 507
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 104/517 (20%), Positives = 201/517 (38%), Gaps = 24/517 (4%)
Query: 67 QCRSFQGSAVIDRVNEVDHEDWGLESFERRESGELVDPGKPVKPPPFVRNDGFTNNKILQ 126
QCRS +++ + W E ESG ++ GK ++ G ++ ++
Sbjct: 76 QCRSIVRRFCSEKIGSSESSGWTEEVEYLDESGSVLHSGKGIRS----VEPGLDDHVMVG 131
Query: 127 NLCTRGRLMAA---ARLIEIMARKSQIPHF----------PSCTNLIRGLIKIGQIDKGC 173
L + M A A+++E++ R P P+ ++ + L + ++D
Sbjct: 132 GL--KKPYMNASSVAKIVEVVQRWKWGPELETQLDKLQFVPNMVHITQSLKIVKEVDAAL 189
Query: 174 KIINIMVMSGGVPDVITCNMVI-GGLCKRGYLKSAVDLVEDMSLSGCSPDAIT---YNTI 229
+ C +V+ GL + L E+M S ++ YN +
Sbjct: 190 SLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQV 249
Query: 230 IRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGC 289
I+ + A +K GC TY L+ L +A E+ E M
Sbjct: 250 IQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDS 309
Query: 290 YPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDD 349
D TY ++ AK G + + + + R ++P+ +++L+ S+ G D
Sbjct: 310 LLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMK 369
Query: 350 VLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLC 409
V M P+ + +++ K+G LD A+ L+ M P+ Y ++
Sbjct: 370 VYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHA 429
Query: 410 KEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEI 469
K G ++ + + + P TY+ ++ A G ++SA ++Y+ M G+ P
Sbjct: 430 KSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLS 489
Query: 470 THSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLM 529
++ SL ++ A ++L EM + A V++ K VD+A++ L M
Sbjct: 490 SYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCA-SDVLMIYIKDASVDLALKWLRFM 548
Query: 530 VRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
S K + I L ++ +G+ A L + L+
Sbjct: 549 GSSGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVH 585
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 148/359 (41%), Gaps = 11/359 (3%)
Query: 192 NMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWK---- 247
N VI L K L+ A + SGC D TYN ++ +KG +A ++
Sbjct: 247 NQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEK 306
Query: 248 -DQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQ 306
D L G TY ++I + + A ++ + M P ++SLV K
Sbjct: 307 TDSLLDGS-----TYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKA 361
Query: 307 GVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTY 366
G + + V + G +P+A + +LI S + G D + + M ++ P Y
Sbjct: 362 GRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLY 421
Query: 367 NIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTG 426
+++ KSG L+ A++++ M P TY+ LL G VD +++ +T
Sbjct: 422 TMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTN 481
Query: 427 TNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEE 486
PGL +Y + LA ++ A ++ EM G D + S + + ++
Sbjct: 482 AGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVD-VCASDVLMIYIKDASVDL 540
Query: 487 AMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALI 545
A++ L+ M K + R + K D A L+ +V S K D +Y +++
Sbjct: 541 ALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSIL 599
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 141/365 (38%), Gaps = 11/365 (3%)
Query: 158 NLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLS 217
NL+ + G K +I M + + D T ++I L K G L +A L + M
Sbjct: 283 NLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKER 342
Query: 218 GCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRA 277
P +++++ M G + ++ + + G P + LI+ + A
Sbjct: 343 KLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTA 402
Query: 278 LEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHS 337
L + ++M G P+ Y ++ AK G E V ++ G P TY+ L+
Sbjct: 403 LRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEM 462
Query: 338 LSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPD 397
+ G D + M P +Y +L L L+D A + M + D
Sbjct: 463 HAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVD 522
Query: 398 IVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGL----ARMGSMESAK 453
+ + L+ + K+ VD ++ L + S G+ T N I L + G +SA+
Sbjct: 523 VCASDVLMIYI-KDASVDLALKWLRFMG----SSGIKTNNFIIRQLFESCMKNGLYDSAR 577
Query: 454 ELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGL 513
L ++ D + ++S+ ++ +L+ + K K A+ C +
Sbjct: 578 PLLETLVHSAGKVDLVLYTSILAHLVRCQDEDKERQLMSILSAT--KHKAHAFMCGLFTG 635
Query: 514 CKQRK 518
+QRK
Sbjct: 636 PEQRK 640
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/475 (21%), Positives = 188/475 (39%), Gaps = 77/475 (16%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N +L C G+ A L++ M ++ P + LI G ++G+ D ++ M
Sbjct: 251 NSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMET 310
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
G DV T +I GL G A+D+ M L+G P+A+T + + N+
Sbjct: 311 FGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQ 370
Query: 242 AVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIR-ALEVLEDMAMEGCYPDIITYNSLV 300
++ G ++ L+++ + CG + A +V + + + D+ T+NS++
Sbjct: 371 GSEVHSIAVKMGFIDDVLVGNSLVDMYSK-CGKLEDARKVFDSVKNK----DVYTWNSMI 425
Query: 301 SFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS- 359
+ + G + Y + + + ++PN +T+NT+I +G D+ + M +
Sbjct: 426 TGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKV 485
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLL-------------- 405
T+N+++ G ++G D A+ L+ M P+ VT +LL
Sbjct: 486 QRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVRE 545
Query: 406 -SGLCKEGFVDEGIQLLYLLTGTNCSPG----------------LVTYNIAIDGLARMGS 448
G +D + LT T G ++T+N I G GS
Sbjct: 546 IHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGS 605
Query: 449 MESAKELYSEMIGKGIVPDEITHSS--LAWGFCG-------------------------- 480
A L+++M +GI P+ T SS LA G G
Sbjct: 606 YGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCS 665
Query: 481 --------VDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALD 527
++LEEA++ ++EM+ + E + + G +D+AI A +
Sbjct: 666 AMVYLYGRANRLEEALQFIQEMNIQSET---PIWESFLTGCRIHGDIDMAIHAAE 717
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 107/543 (19%), Positives = 210/543 (38%), Gaps = 78/543 (14%)
Query: 91 ESFERRESGELVDPGKPVKPPPFVRNDGFTNNK--------ILQNLCTRGRLMAAARLIE 142
++F ++ V+ + P +N FT K LC G L+ A + ++
Sbjct: 11 KTFLNYQTPAKVENSPELHPKSRKKNLSFTKKKEPNIIPDEQFDYLCRNGSLLEAEKALD 70
Query: 143 IMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRG 202
+ ++ + L+ I G I G +I++ PDV ++ K G
Sbjct: 71 SLFQQGSKVKRSTYLKLLESCIDSGSIHLG-RILHARFGLFTEPDVFVETKLLSMYAKCG 129
Query: 203 YLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYT 262
+ A + + M + T++ +I + + E ++ ++ G P +
Sbjct: 130 CIADARKVFDSMR----ERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFP 185
Query: 263 VLIELVCRYCGAIRALEVLED----MAMEGCYP--------------------------- 291
+++ C CG + A +V+ + M C
Sbjct: 186 KILQ-GCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRE 244
Query: 292 -DIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDV 350
D+I +NS++ + G +EE ++ + G+ P VT+N LI + G D D+
Sbjct: 245 RDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDL 304
Query: 351 LEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSG--- 407
++ M T+ M++GL +G+ +A+ ++ M P+ VT + +S
Sbjct: 305 MQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSC 364
Query: 408 -------------LCKEGFVDE---GIQLLYLLT------------GTNCSPGLVTYNIA 439
K GF+D+ G L+ + + + + + T+N
Sbjct: 365 LKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSM 424
Query: 440 IDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDE 499
I G + G A EL++ M + P+ IT +++ G+ EAM+L + M K +
Sbjct: 425 ITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGK 484
Query: 500 KIKHTA-YRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEAN 558
++TA + +I G + K D A++ M SR P+ +L+ A A+ K
Sbjct: 485 VQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVR 544
Query: 559 DLH 561
++H
Sbjct: 545 EIH 547
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 121/253 (47%), Gaps = 13/253 (5%)
Query: 308 VYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS---PPTRV 364
+Y+E +++ +LS N YN++I + G ++ M + + PT
Sbjct: 187 MYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIR 246
Query: 365 TYNIMLNGLCKSG--------LLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDE 416
TY+I+ L G ++ SL+ MV PD+ N L+ G V++
Sbjct: 247 TYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVND 306
Query: 417 GIQLLYLLTGT-NCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLA 475
+++ + ++ +C P TY+ I GL G +A+EL SEM GKG VP+ +++SL
Sbjct: 307 ALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLV 366
Query: 476 WGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCK 535
F ++++A++ L EM + + +YR ++ C++ K D A + L+ M+R +
Sbjct: 367 NAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLE-MLREKQL 425
Query: 536 PDEKIYDALIKAV 548
D YD L+ +
Sbjct: 426 VDRDSYDKLVNVL 438
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 104/230 (45%), Gaps = 13/230 (5%)
Query: 158 NLIRGLIKIGQIDKGCKIINIMVMSGGV---PDVITCNMVIGGLCKRG--------YLKS 206
++I K G++ + I MV S + P + T +++ L RG Y+++
Sbjct: 212 SIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMET 271
Query: 207 AVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVS-FWKDQLRKGCPPYLITYTVLI 265
L M SG PD N +++G + N+A+ F + + C P TY LI
Sbjct: 272 VRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLI 331
Query: 266 ELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQ 325
+C I A E+L +M +G P+ +YNSLV+ A G ++ + ++ G
Sbjct: 332 HGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRV 391
Query: 326 PNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCK 375
+ ++Y TL+ G +D +LE++ E R +Y+ ++N L K
Sbjct: 392 VDFISYRTLVDESCRKGKYDEATRLLEMLRE-KQLVDRDSYDKLVNVLHK 440
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 99/232 (42%), Gaps = 13/232 (5%)
Query: 192 NMVIGGLCKRGYLKSAVDLVEDMSLSG---CSPDAITYNTIIRGMFDKGN-------FNE 241
N +I K G L AV++ M S C P TY+ + + + +GN + E
Sbjct: 211 NSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYME 270
Query: 242 AV-SFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAM-EGCYPDIITYNSL 299
V S ++ + G P + L++ AL + M++ C P+ TY+ L
Sbjct: 271 TVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYL 330
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS 359
+ QG ++S + +G PN +YN+L+++ + G D L M E
Sbjct: 331 IHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGR 390
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKE 411
++Y +++ C+ G D A L M+ E D +Y+ L++ L K+
Sbjct: 391 VVDFISYRTLVDESCRKGKYDEATRLLE-MLREKQLVDRDSYDKLVNVLHKD 441
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 100/253 (39%), Gaps = 12/253 (4%)
Query: 330 TYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTM 389
+Y+ I L + + +DD++ + YN ++ K+G L RA++++ M
Sbjct: 174 SYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHM 233
Query: 390 VSES---CFPDIVTYNTLLSGLCKEG--------FVDEGIQLLYLLTGTNCSPGLVTYNI 438
V+ C P I TY+ L L G +++ L + + P + N
Sbjct: 234 VTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNC 293
Query: 439 AIDGLARMGSMESAKELYSEM-IGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKK 497
+ G + A ++ +M + P+ T+ L G C + A ELL EM K
Sbjct: 294 LVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGK 353
Query: 498 DEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
+Y ++ ++D A++ L M+ + D Y L+ G EA
Sbjct: 354 GFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEA 413
Query: 558 NDLHQRLIEWKIL 570
L + L E +++
Sbjct: 414 TRLLEMLREKQLV 426
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
+ FT + ++ LC +GR + A L+ M K +P+ S +L+ G+ID K +
Sbjct: 323 NSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCL 382
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVE 212
M+ +G V D I+ ++ C++G A L+E
Sbjct: 383 WEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLE 418
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 169/397 (42%), Gaps = 36/397 (9%)
Query: 186 PDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRG-----MFDKGNFN 240
P + N +I G + + + A+ + +M L+ SPD+ T+ +++ G F
Sbjct: 82 PQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFV 141
Query: 241 EAVSFWKDQLRKGCPPYLITYTVLIELV--CRYCGAIRALEVLEDMAMEGCYPD--IITY 296
A F R G + LI L CR G+ R V E + + P+ I+++
Sbjct: 142 HAQVF-----RLGFDADVFVQNGLIALYAKCRRLGSART--VFEGLPL----PERTIVSW 190
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHS---LSSHGYWDGVDDVLEI 353
++VS A+ G E + S + ++P+ V +++++ L + +
Sbjct: 191 TAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVK 250
Query: 354 MNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
M P ++ N M K G + A L+ M S P+++ +N ++SG K G+
Sbjct: 251 MGLEIEPDLLISLNTMY---AKCGQVATAKILFDKMKS----PNLILWNAMISGYAKNGY 303
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEI-THS 472
E I + + + + P ++ AI A++GS+E A+ +Y E +G+ D++ S
Sbjct: 304 AREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMY-EYVGRSDYRDDVFISS 362
Query: 473 SLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRS 532
+L F +E A + +D + + +I+G + AI M R
Sbjct: 363 ALIDMFAKCGSVEGARLVFDRTLDRDVVV----WSAMIVGYGLHGRAREAISLYRAMERG 418
Query: 533 RCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKI 569
P++ + L+ A SGMV+E R+ + KI
Sbjct: 419 GVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKI 455
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 122/336 (36%), Gaps = 51/336 (15%)
Query: 124 ILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSG 183
I+ G M A + M + P + + +++ + + +G + I+ V+
Sbjct: 193 IVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQG-RSIHASVVKM 251
Query: 184 GV---PDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFN 240
G+ PD++ + C G + +A L + M SP+ I +N +I G G
Sbjct: 252 GLEIEPDLLISLNTMYAKC--GQVATAKILFDKMK----SPNLILWNAMISGYAKNGYAR 305
Query: 241 EAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAI-RALEVLEDMAMEGCYPDIITYNSL 299
EA+ + + + K P I+ T I C G++ +A + E + D+ ++L
Sbjct: 306 EAIDMFHEMINKDVRPDTISITSAIS-ACAQVGSLEQARSMYEYVGRSDYRDDVFISSAL 364
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS 359
+ AK G E LV L R +
Sbjct: 365 IDMFAKCGSVEGARLVFDRTLDRDV----------------------------------- 389
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQ 419
V ++ M+ G G AISLY M P+ VT+ LL G V EG
Sbjct: 390 ----VVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWW 445
Query: 420 LLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKEL 455
+ +P Y ID L R G ++ A E+
Sbjct: 446 FFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEV 481
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 86/182 (47%), Gaps = 18/182 (9%)
Query: 315 VISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLC 374
+ + RG+ N VTY TLI L G D ++ + M PP +TYNI+L+GLC
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 375 KSGLLDRAI---------SLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLT 425
K+G L++A+ L+ ++ + P++VTY T++SG CK+GF +E L +
Sbjct: 63 KNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMK 122
Query: 426 GTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIG---------KGIVPDEITHSSLAW 476
P TYN I R G ++ EL EM G+V D + L
Sbjct: 123 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRLDK 182
Query: 477 GF 478
GF
Sbjct: 183 GF 184
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 96/185 (51%), Gaps = 10/185 (5%)
Query: 208 VDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIEL 267
++L +MS G + +TY T+I+G+F G+ + A +K+ + G PP ++TY +L++
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 268 VCRYCGAIRALEV--LED-------MAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISN 318
+C+ +AL +ED ++++G P+++TY +++S K+G EE Y +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 319 LLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGL 378
+ G P++ TYNTLI + G ++++ M TY ++ + + G
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD-MLHDGR 179
Query: 379 LDRAI 383
LD+
Sbjct: 180 LDKGF 184
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 70/141 (49%), Gaps = 9/141 (6%)
Query: 364 VTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF---------V 414
VTY ++ GL ++G D A ++ MVS+ PDI+TYN LL GLCK G V
Sbjct: 17 VTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKV 76
Query: 415 DEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSL 474
++G L L+ P +VTY I G + G E A L+ +M G +PD T+++L
Sbjct: 77 EDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTL 136
Query: 475 AWGFCGVDQLEEAMELLKEMH 495
+ EL+KEM
Sbjct: 137 IRAHLRDGDKAASAELIKEMR 157
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 27/177 (15%)
Query: 139 RLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGL 198
L M+++ + + + T LI+GL + G D +I MV G PD++T N+++ GL
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 199 CKRGYLKSAV---------DLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQ 249
CK G L+ A+ DL +SL G P+ +TY T+I G KG EA + ++
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 250 LRKGCPPYLITYTVLI-------------ELV-----CRYCGAIRALEVLEDMAMEG 288
G P TY LI EL+ CR+ G ++ DM +G
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDG 178
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 9/175 (5%)
Query: 278 LEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHS 337
+E+ +M+ G + +TY +L+ + G + + ++S G+ P+ +TYN L+
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 338 LSSHGYWDG------VDDVLEIMNETS---SPPTRVTYNIMLNGLCKSGLLDRAISLYST 388
L +G + V+D ++ S P VTY M++G CK G + A +L+
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 389 MVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGL 443
M + PD TYNTL+ ++G +L+ + + TY + D L
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 175
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Query: 383 ISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDG 442
+ L+ M + VTY TL+ GL + G D ++ + P ++TYNI +DG
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 443 LARMGSMESAK---------ELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKE 493
L + G +E A +L+ + KG+ P+ +T++++ GFC EEA L ++
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 494 MHK 496
M +
Sbjct: 121 MKE 123
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 9/123 (7%)
Query: 434 VTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAM----- 488
VTY I GL + G + A+E++ EM+ G+ PD +T++ L G C +LE+A+
Sbjct: 17 VTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKV 76
Query: 489 ----ELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDAL 544
+L + K K Y +I G CK+ + A M PD Y+ L
Sbjct: 77 EDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTL 136
Query: 545 IKA 547
I+A
Sbjct: 137 IRA 139
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 120/247 (48%), Gaps = 11/247 (4%)
Query: 159 LIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSG 218
++ G +G + + + ++ S PDV++ +I L K+G L A++L M +
Sbjct: 253 ILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTR 312
Query: 219 CSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRAL 278
+PD N +I + K EA+ +++ KG P ++TY L++ +C+ +
Sbjct: 313 RNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVW 372
Query: 279 EVLEDMAMEG--CYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIH 336
E++E+M ++G C P+ +T++ L+ ++ + ++ +V+ + + + YN +
Sbjct: 373 ELVEEMELKGGSCSPNDVTFSYLLKYSQRS---KDVDIVLERMAKNKCEMTSDLYNLM-- 427
Query: 337 SLSSHGYWDGVDDVLEIMNETSSP---PTRVTYNIMLNGLCKSGLLDRAISLYSTMVSES 393
+ WD + V EI +E P + TY I ++GL G + A+S + M+S+
Sbjct: 428 -FRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKG 486
Query: 394 CFPDIVT 400
P+ T
Sbjct: 487 MVPEPRT 493
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 148/354 (41%), Gaps = 12/354 (3%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N+IL L R ++ + M+++ + + L+ ++D+ +
Sbjct: 147 NEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKE 206
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLV-EDMSLSGCSPDAITYNTIIRGMFDKGNFN 240
G D++ + ++ LC+ +++ A L GC A+ N I+ G GN +
Sbjct: 207 FGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAM--NMILNGWCVLGNVH 264
Query: 241 EAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLV 300
EA FWKD + C P +++Y +I + + +A+E+ M PD+ N+++
Sbjct: 265 EAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVI 324
Query: 301 SFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSL----SSHGYWDGVDDVLEIMNE 356
+ E V + +G PN VTYN+L+ L + W+ V+++ +
Sbjct: 325 DALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEME--LKG 382
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDE 416
S P VT++ +L +S +D + M C YN + + ++
Sbjct: 383 GSCSPNDVTFSYLLKYSQRSKDVDIVL---ERMAKNKCEMTSDLYNLMFRLYVQWDKEEK 439
Query: 417 GIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEIT 470
++ + + P TY I I GL G + A + EM+ KG+VP+ T
Sbjct: 440 VREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRT 493
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 132/292 (45%), Gaps = 6/292 (2%)
Query: 259 ITYTVLIELVCRYCGAIRALE----VLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYL 314
++ ++L + G +R E V ++M+ + + TY L++ A +E
Sbjct: 140 LSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVG 199
Query: 315 VISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLC 374
V G+ + V ++ L+ L + + + + + + N++LNG C
Sbjct: 200 VFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAM-NMILNGWC 258
Query: 375 KSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLV 434
G + A + +++ C PD+V+Y T+++ L K+G + + ++L + T +P +
Sbjct: 259 VLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVK 318
Query: 435 TYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEM 494
N ID L + A E++ E+ KG P+ +T++SL C + + E+ EL++EM
Sbjct: 319 ICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEM 378
Query: 495 HKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIK 546
K L QR D+ I L+ M +++C+ +Y+ + +
Sbjct: 379 ELKGGSCSPNDVTFSYLLKYSQRSKDVDI-VLERMAKNKCEMTSDLYNLMFR 429
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 139/341 (40%), Gaps = 37/341 (10%)
Query: 192 NMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLR 251
N ++ L K + + ++MS + TY ++ +EAV ++ +
Sbjct: 147 NEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKE 206
Query: 252 KGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAME-GCYPDIITYNSLVSFTAKQGVYE 310
G L+ + L+ +CRY A + E GC DI N +++ G
Sbjct: 207 FGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGC--DIKAMNMILNGWCVLGNVH 264
Query: 311 ETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIML 370
E ++++ +P+ V+Y T+I++L+ G ++ M +T P N ++
Sbjct: 265 EAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVI 324
Query: 371 NGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLL--YLLTGTN 428
+ LC + A+ ++ + + P++VTYN+LL LCK ++ +L+ L G +
Sbjct: 325 DALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGS 384
Query: 429 CSPGLVT--------------------------------YNIAIDGLARMGSMESAKELY 456
CSP VT YN+ + E +E++
Sbjct: 385 CSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIW 444
Query: 457 SEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKK 497
SEM G+ PD+ T++ G ++ EA+ +EM K
Sbjct: 445 SEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSK 485
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 94/219 (42%), Gaps = 7/219 (3%)
Query: 115 RNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCK 174
R D + ++ L +G+L A L M + P C N+I L +I + +
Sbjct: 279 RPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALE 338
Query: 175 IINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSG--CSPDAITYNTIIRG 232
+ + G P+V+T N ++ LCK + +LVE+M L G CSP+ +T++ +++
Sbjct: 339 VFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLK- 397
Query: 233 MFDKGNFNEAVSFWKDQLRKG-CPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYP 291
++ V +++ K C Y ++ L ++ + E+ +M G P
Sbjct: 398 ---YSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGP 454
Query: 292 DIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVT 330
D TY + +G E ++S+GM P T
Sbjct: 455 DQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRT 493
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 121/287 (42%), Gaps = 36/287 (12%)
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
N L++ K G + + V S G PNA TY + +L + D V E M +
Sbjct: 235 NELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLK 294
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISLY---------------STMVSESCFPD---- 397
+ ++ CK G + A S+Y +T+++ C D
Sbjct: 295 SGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTIT 354
Query: 398 -----------------IVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAI 440
I ++ ++ LC+ V + LL + +PG +N+ +
Sbjct: 355 FAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVV 414
Query: 441 DGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEK 500
++ G ++ AKE+ M +G+ PD T++ + G+ ++EA E+L E KK +K
Sbjct: 415 HACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKK 474
Query: 501 IKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKA 547
+ Y +I G CK + D A++ L+ M R +P+ Y+ LI++
Sbjct: 475 LSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQS 521
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 125/268 (46%), Gaps = 11/268 (4%)
Query: 253 GCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEET 312
G P TY + +E +C+ A V E M G + +++++ K+G EE
Sbjct: 261 GFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEA 320
Query: 313 YLV--ISNLLSRGMQPNAVTYNTLIHSLSSHGYWDG-VDDVLEIMNETSSPPTR---VTY 366
Y V ++ + + P V TLI +L + DG + E++ + S R +
Sbjct: 321 YSVYELAKTKEKSLPPRFVA--TLITALCKN---DGTITFAQEMLGDLSGEARRRGIKPF 375
Query: 367 NIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTG 426
+ +++ LC+ + A +L M+S+ P +N ++ K G +DE ++L L+
Sbjct: 376 SDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMES 435
Query: 427 TNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEE 486
P + TY + I G A+ G M+ A+E+ +E K +T+ +L G+C +++ +E
Sbjct: 436 RGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDE 495
Query: 487 AMELLKEMHKKDEKIKHTAYRCVILGLC 514
A++LL EM + + Y +I C
Sbjct: 496 ALKLLNEMDRFGVQPNADEYNKLIQSFC 523
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 114/300 (38%), Gaps = 36/300 (12%)
Query: 159 LIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSG 218
LI K+G+ + + G P+ T + + LCKR ++ A + E M SG
Sbjct: 237 LIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSG 296
Query: 219 CSPDAITYNTIIRGMFDKGNFNEAVSFWK--DQLRKGCPPYLIT---------------- 260
+ II +G EA S ++ K PP +
Sbjct: 297 VLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITFA 356
Query: 261 ------------------YTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSF 302
++ +I +CR A +L DM +G P +N +V
Sbjct: 357 QEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHA 416
Query: 303 TAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPT 362
+K G +E V+ + SRG++P+ TY +I + G D ++L + +
Sbjct: 417 CSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLS 476
Query: 363 RVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLY 422
VTY+ ++ G CK D A+ L + M P+ YN L+ C + E ++L+
Sbjct: 477 PVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLF 536
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 97/489 (19%), Positives = 190/489 (38%), Gaps = 74/489 (15%)
Query: 143 IMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM----SGGV--PDVITCNMVIG 196
++ K ++P C +I+G K ++ +++ + SGGV P++ N ++G
Sbjct: 137 VLKDKGELPLQVFCA-MIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNSLLG 195
Query: 197 GLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPP 256
+ RG+ A +++DM G P+ +TYNT++ ++G F +A+ KG P
Sbjct: 196 AM--RGF-GEAEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEP 252
Query: 257 YLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI---------------------IT 295
ITY+ + + R + ALE ++ + +I I
Sbjct: 253 NPITYSTALLVYRRMEDGMGALEFFVELREKYAKREIGNDVGYDWEFEFVKLENFIGRIC 312
Query: 296 YNSLVSFTAKQGVYEETYLVISNLL-SRGMQPNAVTYNTLIHSLSSHGY----------- 343
Y + + K + L + N + S G++P+ + LI + + +
Sbjct: 313 YQVMRRWLVKDDNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRI 372
Query: 344 ------------------------WDGVDDVLEIMNETSSPPTRVTY-------NIMLNG 372
W ++ E + + P ++Y NI+L+
Sbjct: 373 RERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSA 432
Query: 373 LCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPG 432
K G+ + L + M + P +N +L K IQ+ + P
Sbjct: 433 ASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPT 492
Query: 433 LVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLK 492
+++Y + L + + A +++ MI GI P+ ++++A G + LLK
Sbjct: 493 VISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLK 552
Query: 493 EMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSG 552
EM K + + VI G + +A + M +P+E Y+ LI+A+A+
Sbjct: 553 EMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDA 612
Query: 553 MVKEANDLH 561
+ A +LH
Sbjct: 613 KPRLAYELH 621
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 114/254 (44%), Gaps = 7/254 (2%)
Query: 264 LIELVCRYCGAIRALEVLEDMAMEGCYPDIITY-------NSLVSFTAKQGVYEETYLVI 316
LI L+ + ALE+ ED+ EG P+ ++Y N L+S +K+G++ ++
Sbjct: 387 LIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLL 446
Query: 317 SNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKS 376
+ + +G++P +N ++ + S + + M + PT ++Y +L+ L K
Sbjct: 447 NKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKG 506
Query: 377 GLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTY 436
L D A +++ M+ P++ Y T+ S L + + LL + P +VT+
Sbjct: 507 KLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTF 566
Query: 437 NIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHK 496
N I G AR G A E + M + + P+EIT+ L + A EL +
Sbjct: 567 NAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQN 626
Query: 497 KDEKIKHTAYRCVI 510
+ K+ Y V+
Sbjct: 627 EGLKLSSKPYDAVV 640
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 84/221 (38%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N +L RG RL+ M K P ++ K + +I MV
Sbjct: 427 NILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVD 486
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
+G P VI+ ++ L K A + M G P+ Y T+ + + FN
Sbjct: 487 NGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNL 546
Query: 242 AVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVS 301
+ K+ KG P ++T+ +I R + A E M E P+ ITY L+
Sbjct: 547 LDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIE 606
Query: 302 FTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHG 342
A Y + + G++ ++ Y+ ++ S ++G
Sbjct: 607 ALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVVKSAETYG 647
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 145/367 (39%), Gaps = 6/367 (1%)
Query: 155 SCTNLIRGLIKIGQIDKGCK-IINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVED 213
S N++ + Q +G + ++ ++ SG D +I K G + + ++
Sbjct: 468 STFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQ 527
Query: 214 MSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCG 273
MS SG + T+ +I G G +A + K P + + LI C G
Sbjct: 528 MSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALIS-ACGQSG 586
Query: 274 AI-RALEVLEDMAMEG--CYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVT 330
A+ RA +VL +M E PD I+ +L+ G E V + G++
Sbjct: 587 AVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEV 646
Query: 331 YNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMV 390
Y ++S S G WD + + M E P V ++ +++ + +LD A +
Sbjct: 647 YTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAK 706
Query: 391 SESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSME 450
S+ ++Y++L+ C + ++L + P + T N I L +
Sbjct: 707 SQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLP 766
Query: 451 SAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVI 510
A E E+ G+ P+ IT+S L D E + +LL + RC I
Sbjct: 767 KAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRC-I 825
Query: 511 LGLCKQR 517
LCK+R
Sbjct: 826 TSLCKRR 832
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 156/389 (40%), Gaps = 44/389 (11%)
Query: 198 LCKRGYLKSAVDLVEDMSLSGC-SPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPP 256
L + G +K + L+ED+ D I + + + + EA F K L P
Sbjct: 410 LLRDGRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQRAVKEAFRFTKLILN----P 465
Query: 257 YLITYTVLIELVCRYCGAIR-ALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLV 315
+ T+ +L+ VC I A VL + G D Y +L+S AK G + + V
Sbjct: 466 TMSTFNMLMS-VCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEV 524
Query: 316 ISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCK 375
+ + G++ N T+ LI + G I+ + P RV +N +++ +
Sbjct: 525 FHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQ 584
Query: 376 SGLLDRAISLYSTMVSES--CFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGL 433
SG +DRA + + M +E+ PD ++ L+ C G V+ ++ ++
Sbjct: 585 SGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTP 644
Query: 434 VTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDE------------------------- 468
Y IA++ ++ G + A +Y +M K + PDE
Sbjct: 645 EVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQD 704
Query: 469 ----------ITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRK 518
I++SSL C ++A+EL +++ + + +I LC+ +
Sbjct: 705 AKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQ 764
Query: 519 VDIAIQALDLMVRSRCKPDEKIYDALIKA 547
+ A++ LD + KP+ Y L+ A
Sbjct: 765 LPKAMEYLDEIKTLGLKPNTITYSMLMLA 793
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 140/340 (41%), Gaps = 4/340 (1%)
Query: 186 PDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSF 245
P + T NM++ ++ A ++ + SG + D Y T+I G +
Sbjct: 465 PTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEV 524
Query: 246 WKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAK 305
+ G L T+ LI+ R +A + + PD + +N+L+S +
Sbjct: 525 FHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQ 584
Query: 306 QGVYEETYLVISNLLSRG--MQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTR 363
G + + V++ + + + P+ ++ L+ + + G + +V +++++ T
Sbjct: 585 SGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTP 644
Query: 364 VTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYL 423
Y I +N KSG D A S+Y M + PD V ++ L+ +DE +L
Sbjct: 645 EVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQD 704
Query: 424 LTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQ 483
G ++Y+ + + A ELY ++ + P T ++L C +Q
Sbjct: 705 AKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQ 764
Query: 484 LEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAI 523
L +AME L E+ K +K +L L +RK D +
Sbjct: 765 LPKAMEYLDEI--KTLGLKPNTITYSMLMLASERKDDFEV 802
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 115/283 (40%), Gaps = 7/283 (2%)
Query: 278 LEVLEDMAMEGCYP-DIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIH 336
+ +LED+ D I + S KQ +E + +L+ P T+N L+
Sbjct: 420 ISLLEDLDQRDLLDMDKIYHASFFKACKKQRAVKEAFRFTKLILN----PTMSTFNMLMS 475
Query: 337 SLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFP 396
+S +G VL ++ E+ Y +++ KSG +D ++ M +
Sbjct: 476 VCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEA 535
Query: 397 DIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELY 456
++ T+ L+ G + G V + +L N P V +N I + G+++ A ++
Sbjct: 536 NLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVL 595
Query: 457 SEMIGKG--IVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLC 514
+EM + I PD I+ +L C Q+E A E+ + +HK + Y +
Sbjct: 596 AEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCS 655
Query: 515 KQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
K D A M PDE + ALI + M+ EA
Sbjct: 656 KSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEA 698
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 181/432 (41%), Gaps = 91/432 (21%)
Query: 153 FPSCTNLIRGLIKIGQIDKGCKIINI---MVMSGGVPDVITCNMVIGGLCKRGYLKSAVD 209
FPS N D+ ++ N+ + S P V +IG LCK G + A
Sbjct: 19 FPSSDN-----------DRSVQLFNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARK 67
Query: 210 LVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVC 269
L + + D +T+ +I G G+ EA EL
Sbjct: 68 LFDGLP----ERDVVTWTHVITGYIKLGDMREAR----------------------ELFD 101
Query: 270 RYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGM-QPNA 328
R +++T+ ++VS G L I+ +L + M + N
Sbjct: 102 RV----------------DSRKNVVTWTAMVS-----GYLRSKQLSIAEMLFQEMPERNV 140
Query: 329 VTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTR--VTYNIMLNGLCKSGLLDRAISLY 386
V++NT+I + G +D LE+ +E P R V++N M+ L + G +D A++L+
Sbjct: 141 VSWNTMIDGYAQSGR---IDKALELFDEM---PERNIVSWNSMVKALVQRGRIDEAMNLF 194
Query: 387 STMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSP--GLVTYNIAIDGLA 444
M D+V++ ++ GL K G VDE +L +C P ++++N I G A
Sbjct: 195 ERMPRR----DVVSWTAMVDGLAKNGKVDEARRLF------DCMPERNIISWNAMITGYA 244
Query: 445 RMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHT 504
+ ++ A +L+ M + D + +++ GF ++ +A L M +K+
Sbjct: 245 QNNRIDEADQLFQVMPER----DFASWNTMITGFIRNREMNKACGLFDRMPEKNV----I 296
Query: 505 AYRCVILGLCKQRKVDIAIQALDLMVRS-RCKPDEKIYDALIKAVADSGMVKEANDLHQR 563
++ +I G + ++ + A+ M+R KP+ Y +++ A +D + E +HQ
Sbjct: 297 SWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQL 356
Query: 564 LIEWKILKTEII 575
+ + K EI+
Sbjct: 357 ISKSVHQKNEIV 368
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 89/453 (19%), Positives = 196/453 (43%), Gaps = 40/453 (8%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N ++ GR+ A L + M ++ + S ++++ L++ G+ID+ + M
Sbjct: 144 NTMIDGYAQSGRIDKALELFDEMPERNIV----SWNSMVKALVQRGRIDEAMNLFERMPR 199
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDA--ITYNTIIRGMFDKGNF 239
DV++ ++ GL K G + A L + C P+ I++N +I G
Sbjct: 200 R----DVVSWTAMVDGLAKNGKVDEARRLFD------CMPERNIISWNAMITGYAQNNRI 249
Query: 240 NEAVSFWKDQLRKGCPPY-LITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPD--IITY 296
+EA DQL + P ++ +I G IR E+ + + P+ +I++
Sbjct: 250 DEA-----DQLFQVMPERDFASWNTMI------TGFIRNREMNKACGLFDRMPEKNVISW 298
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRG-MQPNAVTYNTLIHSLSS-HGYWDGVDDVLEIM 354
++++ + EE V S +L G ++PN TY +++ + S G +G + +++
Sbjct: 299 TTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEG-QQIHQLI 357
Query: 355 NETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFV 414
+++ + + +LN KSG L A ++ + C D++++N++++ G
Sbjct: 358 SKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLV--CQRDLISWNSMIAVYAHHGHG 415
Query: 415 DEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSL 474
E I++ + P VTY + + G +E E + +++ +P H +
Sbjct: 416 KEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTC 475
Query: 475 AWGFCG-VDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSR 533
CG +L++ + + D ++ + Y ++ +V IA + + ++ +
Sbjct: 476 LVDLCGRAGRLKDVTNFI---NCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLET- 531
Query: 534 CKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
D Y + A +G +EA ++ ++ E
Sbjct: 532 GSDDAGTYVLMSNIYAANGKREEAAEMRMKMKE 564
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 84/406 (20%), Positives = 154/406 (37%), Gaps = 76/406 (18%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM-- 179
N +++ L RGR+ A L E M R+ + S T ++ GL K G++D+ ++ + M
Sbjct: 175 NSMVKALVQRGRIDEAMNLFERMPRRDVV----SWTAMVDGLAKNGKVDEARRLFDCMPE 230
Query: 180 -------VMSGGVP------------------DVITCNMVIGGLCKRGYLKSAVDLVEDM 214
M G D + N +I G + + A L + M
Sbjct: 231 RNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRM 290
Query: 215 SLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKG-CPPYLITYTVLIELVCRYCG 273
+ I++ T+I G + EA++ + LR G P + TY ++ G
Sbjct: 291 P----EKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAG 346
Query: 274 AIRALEVLE-------------------------------DMAMEG--CYPDIITYNSLV 300
+ ++ + M G C D+I++NS++
Sbjct: 347 LVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMI 406
Query: 301 SFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSP 360
+ A G +E + + + G +P+AVTY L+ + S G + + + + S
Sbjct: 407 AVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESL 466
Query: 361 PTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSG--LCKEGFVDEGI 418
P R + L LC G R + + + + Y +LS + E + + +
Sbjct: 467 PLREEHYTCLVDLC--GRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEV 524
Query: 419 QLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGI 464
L TG++ + TY + + A G E A E+ +M KG+
Sbjct: 525 VKKVLETGSDDAG---TYVLMSNIYAANGKREEAAEMRMKMKEKGL 567
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 180/434 (41%), Gaps = 48/434 (11%)
Query: 165 KIGQIDKGCKIINIMVMSGGVPD--VITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPD 222
K G +D K+ + +PD + N ++ G + G + A+ L DM G P
Sbjct: 220 KCGVLDDASKVFD------EIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPT 273
Query: 223 AITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLE 282
+T +T + + G E + G I T L+ C+ G I E++
Sbjct: 274 RVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCK-VGLIEYAEMVF 332
Query: 283 DMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHG 342
D E D++T+N ++S +QG+ E+ + + ++ + VT TL+ + +
Sbjct: 333 DRMFE---KDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTE 389
Query: 343 YWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYN 402
+V S V + +++ K G + A ++ + V + D++ +N
Sbjct: 390 NLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEK----DLILWN 445
Query: 403 TLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGK 462
TLL+ + G E ++L Y + P ++T+N+ I L R G ++ AK+++ +M
Sbjct: 446 TLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSS 505
Query: 463 GIVPDEITHSSLAWGFCGVDQLEEAMELLKEM--------------------HKKDEKIK 502
GI+P+ I+ +++ G EEA+ L++M H I
Sbjct: 506 GIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIG 565
Query: 503 HTAYRCVILGLCKQRKVDIAIQALDLMVR------------SRCKPDEKIYDALIKAVAD 550
T + +I L V I +D+ + S+ + + +A+I A A
Sbjct: 566 RTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYAL 625
Query: 551 SGMVKEANDLHQRL 564
G +KEA L++ L
Sbjct: 626 YGNLKEAIALYRSL 639
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 113/282 (40%), Gaps = 39/282 (13%)
Query: 179 MVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN 238
M + G P+VIT N++I L + G + A D+ M SG P+ I++ T++ GM G
Sbjct: 467 MQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGC 526
Query: 239 FNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNS 298
EA+ F + G P + TV + C + +L + + G + ++S
Sbjct: 527 SEEAILFLRKMQESGLRPNAFSITVALSA----CAHLASLHI--GRTIHGYIIRNLQHSS 580
Query: 299 LVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETS 358
LVS ET LV M N S Y S
Sbjct: 581 LVSI--------ETSLV-------DMYAKCGDINKAEKVFGSKLY--------------S 611
Query: 359 SPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGI 418
P N M++ G L AI+LY ++ PD +T +LS G +++ I
Sbjct: 612 ELPLS---NAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAI 668
Query: 419 QLLY-LLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEM 459
++ +++ + P L Y + +D LA G E A L EM
Sbjct: 669 EIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEM 710
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 150/375 (40%), Gaps = 38/375 (10%)
Query: 195 IGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGC 254
+ LCK G +K A+ LV +M Y I++G + + + L+ G
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNG- 100
Query: 255 PPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYL 314
Y + +LV Y ALE+ E + + ++ ++ +++ + G+ E +
Sbjct: 101 DFYARNEYIETKLVIFY-AKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALM 159
Query: 315 VISNLLSRGMQPNAVTYNTLIHSLSS----------HGYW--DGVDDVLEIMNETSSPPT 362
+L + P+ + + + HGY G++D + + + +
Sbjct: 160 GFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLAD--- 216
Query: 363 RVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPD--IVTYNTLLSGLCKEGFVDEGIQL 420
+ G C G+LD A ++ + PD V +N L+ G + G +E I+L
Sbjct: 217 -------MYGKC--GVLDDASKVFDEI------PDRNAVAWNALMVGYVQNGKNEEAIRL 261
Query: 421 LYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCG 480
+ P VT + + A MG +E K+ ++ I G+ D I +SL +C
Sbjct: 262 FSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCK 321
Query: 481 VDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKI 540
V +E A + M +KD + +I G +Q V+ AI LM + K D
Sbjct: 322 VGLIEYAEMVFDRMFEKDV----VTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVT 377
Query: 541 YDALIKAVADSGMVK 555
L+ A A + +K
Sbjct: 378 LATLMSAAARTENLK 392
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 157 TNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSL 216
T+L+ K G I+K K+ + S ++ N +I G LK A+ L +
Sbjct: 586 TSLVDMYAKCGDINKAEKVFGSKLYS----ELPLSNAMISAYALYGNLKEAIALYRSLEG 641
Query: 217 SGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQL-RKGCPPYLITYTVLIELVCRYCGAI 275
G PD IT ++ G+ N+A+ + D + ++ P L Y ++++L+
Sbjct: 642 VGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETE 701
Query: 276 RALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGM---QP-NAVTY 331
+AL ++E+M + PD SLV+ KQ +T LV + LSR + +P N+ Y
Sbjct: 702 KALRLIEEMPFK---PDARMIQSLVASCNKQ---RKTELV--DYLSRKLLESEPENSGNY 753
Query: 332 NTLIHSLSSHGYWDGVDDVLEIM 354
T+ ++ + G WD V + E+M
Sbjct: 754 VTISNAYAVEGSWDEVVKMREMM 776
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 128/293 (43%), Gaps = 8/293 (2%)
Query: 99 GELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTN 158
G +VD K V D N +L G A RL M + P+ +
Sbjct: 424 GSIVDAKKVFDST--VEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNL 481
Query: 159 LIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSG 218
+I L++ GQ+D+ + M SG +P++I+ ++ G+ + G + A+ + M SG
Sbjct: 482 IILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESG 541
Query: 219 CSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITY-TVLIELVCRYCGAIRA 277
P+A + + + + + +R L++ T L+++ + CG I
Sbjct: 542 LRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAK-CGDINK 600
Query: 278 LEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHS 337
E + + Y ++ N+++S A G +E + +L G++P+ +T ++ +
Sbjct: 601 AEKVFGSKL---YSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSA 657
Query: 338 LSSHGYWDGVDDVL-EIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTM 389
+ G + ++ +I+++ S P Y +M++ L +G ++A+ L M
Sbjct: 658 CNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEM 710
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 133/325 (40%), Gaps = 3/325 (0%)
Query: 204 LKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTV 263
K L +M GC T+ +I G N A+ +K+ G P T+
Sbjct: 694 FKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKC 753
Query: 264 LIELVCRYCG--AIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLS 321
LI ++C G A +M G PD + + G ++ + +L
Sbjct: 754 LITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGK 813
Query: 322 RGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDR 381
G P V Y+ I +L G + L S + TY +++GL + G L +
Sbjct: 814 IGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQK 872
Query: 382 AISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAID 441
A+ ++M P + Y +L+ KE +++ ++ + G +C P +VTY I
Sbjct: 873 ALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMIC 932
Query: 442 GLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKI 501
G +G +E A + M +G PD T+S C + E+A++LL EM K
Sbjct: 933 GYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAP 992
Query: 502 KHTAYRCVILGLCKQRKVDIAIQAL 526
+R V GL ++ K D+A AL
Sbjct: 993 STINFRTVFYGLNREGKHDLARIAL 1017
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/391 (20%), Positives = 166/391 (42%), Gaps = 45/391 (11%)
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
++++ M +G D+ T ++I K + + + E M SG DA YN +IR +
Sbjct: 210 ELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSL 269
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDI 293
G + A+ F+K+ + KG L TY +L++ + + ++V++ +A D+
Sbjct: 270 CIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKS----EKVDVVQSIA-----DDM 320
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI 353
+ + A + L+ S G + + LE+
Sbjct: 321 VRICEISEHDA--------------------------FGYLLKSFCVSG---KIKEALEL 351
Query: 354 MNETSSPPTRVT---YNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCK 410
+ E + + + I++ GLC++ + A+ + M D Y ++SG +
Sbjct: 352 IRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRK-LDDSNVYGIIISGYLR 410
Query: 411 EGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEIT 470
+ V + ++ ++ + P + TY + L ++ E L++EMI GI PD +
Sbjct: 411 QNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVA 470
Query: 471 HSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMV 530
+++ G G +++ EA ++ M +K K +Y + LC+ + D I+ + M
Sbjct: 471 ITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMH 530
Query: 531 RSRCKPDEKIYDALIKAVADSGMVKEANDLH 561
S+ + I+ +I ++ +G E +H
Sbjct: 531 ASKIVIRDDIFSWVISSMEKNG---EKEKIH 558
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 104/244 (42%), Gaps = 1/244 (0%)
Query: 169 IDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNT 228
+++ + M+ SG VPD +G LC+ G K A ++ + G P + Y+
Sbjct: 766 VEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSI 824
Query: 229 IIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEG 288
IR + G EA+S + TY ++ + + +AL+ + M G
Sbjct: 825 YIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIG 884
Query: 289 CYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVD 348
P + Y SL+ + K+ E+ + +P+ VTY +I S G +
Sbjct: 885 TKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAW 944
Query: 349 DVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGL 408
+ M E + P TY+ +N LC++ + A+ L S M+ + P + + T+ GL
Sbjct: 945 NAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGL 1004
Query: 409 CKEG 412
+EG
Sbjct: 1005 NREG 1008
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 84/199 (42%)
Query: 184 GVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAV 243
G P + ++ I LC+ G L+ A+ + D TY +I+ G+ +G+ +A+
Sbjct: 815 GFPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKAL 874
Query: 244 SFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFT 303
G P + YT LI + + LE + M E C P ++TY +++
Sbjct: 875 DKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGY 934
Query: 304 AKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTR 363
G EE + N+ RG P+ TY+ I+ L + +L M + P+
Sbjct: 935 MSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPST 994
Query: 364 VTYNIMLNGLCKSGLLDRA 382
+ + + GL + G D A
Sbjct: 995 INFRTVFYGLNREGKHDLA 1013
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 117/249 (46%), Gaps = 7/249 (2%)
Query: 323 GMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRA 382
G YNT++ D VD+++ M + T+ I+++ K+ + +
Sbjct: 184 GFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKG 243
Query: 383 ISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDG 442
+ ++ M D YN ++ LC G D ++ + + GL TY + +D
Sbjct: 244 LLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDC 303
Query: 443 LARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIK 502
+A+ ++ + + +M+ + + L FC +++EA+EL++E+ K+ +
Sbjct: 304 IAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLD 363
Query: 503 HTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQ 562
+ ++ GLC+ ++ A++ +D+M R + D +Y +I SG +++ ND+ +
Sbjct: 364 AKYFEILVKGLCRANRMVDALEIVDIMKRRKL-DDSNVYGIII-----SGYLRQ-NDVSK 416
Query: 563 RLIEWKILK 571
L +++++K
Sbjct: 417 ALEQFEVIK 425
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/452 (18%), Positives = 181/452 (40%), Gaps = 33/452 (7%)
Query: 124 ILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSG 183
+++ LC R++ A +++IM R+ ++ +I G ++ + K + ++ SG
Sbjct: 370 LVKGLCRANRMVDALEIVDIMKRR-KLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSG 428
Query: 184 GVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAV 243
P V T ++ L K + +L +M +G PD++ ++ G + EA
Sbjct: 429 RPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAW 488
Query: 244 SFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFT 303
+ KG P +Y++ ++ +CR +++ M ++ ++S
Sbjct: 489 KVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSM 548
Query: 304 AKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGY---WDGVDDV--LEIMNETS 358
K G E+ +L+ + +Q + +Y ++ + + VDD +++ +++
Sbjct: 549 EKNGEKEKIHLI------KEIQKRSNSYCDELNGSGKAEFSQEEELVDDYNCPQLVQQSA 602
Query: 359 SPPTRVTYNIM-LNGLCKSGLLDRAISLYSTMVSESCF---PDIVTYNTLLSGLCKEGFV 414
PP + M + +C+ R + +S P++V + +
Sbjct: 603 LPPALSAVDKMDVQEICRVLSSSRDWERTQEALEKSTVQFTPELVVEVLRHAKI------ 656
Query: 415 DEGIQLLYLLTGTNCSPGLV----TYNIAIDGLARMGSMESAKELYSEMIGKG--IVPDE 468
+G +L + G YN++I + + L+ EM +G I D
Sbjct: 657 -QGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDT 715
Query: 469 ITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLC--KQRKVDIAIQAL 526
+ +G G+ + A+ KEM + ++C+I LC K R V+ A +
Sbjct: 716 WAIMIMQYGRTGLTNI--AIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTF 773
Query: 527 DLMVRSRCKPDEKIYDALIKAVADSGMVKEAN 558
M+RS PD ++ + + + G K+A
Sbjct: 774 REMIRSGFVPDRELVQDYLGCLCEVGNTKDAK 805
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/343 (19%), Positives = 136/343 (39%), Gaps = 6/343 (1%)
Query: 157 TNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSL 216
T LI K +I KG + M SG D N++I LC G A++ ++M
Sbjct: 228 TILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMME 287
Query: 217 SGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIR 276
G + TY ++ + + S D +R + L++ C
Sbjct: 288 KGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKE 347
Query: 277 ALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIH 336
ALE++ ++ + D + LV + + L I +++ R ++ Y +I
Sbjct: 348 ALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDA-LEIVDIMKRRKLDDSNVYGIIIS 406
Query: 337 SLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFP 396
+ E++ ++ PP TY ++ L K ++ +L++ M+ P
Sbjct: 407 GYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEP 466
Query: 397 DIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELY 456
D V +++G + V E ++ + P +Y+I + L R + +++
Sbjct: 467 DSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIF 526
Query: 457 SEMIGKGIVPDEITHSSLAWGFCGVDQ--LEEAMELLKEMHKK 497
++M IV I +W +++ +E + L+KE+ K+
Sbjct: 527 NQMHASKIV---IRDDIFSWVISSMEKNGEKEKIHLIKEIQKR 566
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 122/329 (37%), Gaps = 34/329 (10%)
Query: 217 SGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIR 276
+G ++ YN I+ +F + S + + R+GC T+ ++I R
Sbjct: 672 NGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNI 731
Query: 277 ALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIH 336
A+ ++M G P T+ L++ V+ R ++ T+ +I
Sbjct: 732 AIRTFKEMKDMGLIPSSSTFKCLIT-------------VLCEKKGRNVEEATRTFREMIR 778
Query: 337 SLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFP 396
S G+ P R L LC+ G A S ++ + FP
Sbjct: 779 S----GF----------------VPDRELVQDYLGCLCEVGNTKDAKSCLDSL-GKIGFP 817
Query: 397 DIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELY 456
V Y+ + LC+ G ++E + L G TY + GL + G ++ A +
Sbjct: 818 VTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKV 877
Query: 457 SEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQ 516
+ M G P ++SL F QLE+ +E ++M + + Y +I G
Sbjct: 878 NSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSL 937
Query: 517 RKVDIAIQALDLMVRSRCKPDEKIYDALI 545
KV+ A A M PD K Y I
Sbjct: 938 GKVEEAWNAFRNMEERGTSPDFKTYSKFI 966
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 120/286 (41%), Gaps = 12/286 (4%)
Query: 288 GCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGV 347
GC + YNSL+ ++ Y +I ++ +G++P+ TY L++ S G
Sbjct: 177 GCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEA 236
Query: 348 DDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSG 407
+ L+ M+ P ++++ GL +G L+ A + S M PDI T+N L+
Sbjct: 237 QEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEA 296
Query: 408 LCKEGFVDEGIQLLYLLTGTNCSPGLV----TYNIAIDGLARMGSMESAKELYSEMIGKG 463
+ K G V+ I++ Y T C GL TY I ++++G ++ A L + + G
Sbjct: 297 ISKSGEVEFCIEMYY----TACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDG 352
Query: 464 IVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAI 523
P ++ + G C ++A +M K Y +I + K A
Sbjct: 353 HKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAA 412
Query: 524 QALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKI 569
L M P + +D + + + G +DL R+ + ++
Sbjct: 413 NYLVEMTEMGLVPISRCFDMVTDGLKNGG----KHDLAMRIEQLEV 454
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 128/307 (41%), Gaps = 3/307 (0%)
Query: 229 IIRGMFDKGNFNEAVSFWKDQLRK-GCPPYLITYTVLIELVCRYCGAIRALEVLEDMAME 287
II G+ ++AV + + GC + Y L+ +C A ++ M +
Sbjct: 152 IIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRK 211
Query: 288 GCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGV 347
G PD TY LV+ G +E + + RG P A + LI L + GY +
Sbjct: 212 GLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESA 271
Query: 348 DDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSG 407
+++ M + P T+NI++ + KSG ++ I +Y T DI TY TL+
Sbjct: 272 KEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPA 331
Query: 408 LCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPD 467
+ K G +DE +LL P Y I G+ R G + A +S+M K P+
Sbjct: 332 VSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPN 391
Query: 468 EITHSSLAWGFCGV-DQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQAL 526
++ L CG + +A L EM + + V GL K D+A++
Sbjct: 392 RPVYTMLI-TMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRIE 450
Query: 527 DLMVRSR 533
L V+ R
Sbjct: 451 QLEVQLR 457
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 110/263 (41%)
Query: 158 NLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLS 217
+L+ L + +I M+ G PD T +++ G C G +K A + +++MS
Sbjct: 187 SLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRR 246
Query: 218 GCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRA 277
G +P A + +I G+ + G A + G P + T+ +LIE + +
Sbjct: 247 GFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFC 306
Query: 278 LEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHS 337
+E+ G DI TY +L+ +K G +E + +++N + G +P Y +I
Sbjct: 307 IEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKG 366
Query: 338 LSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPD 397
+ +G +D M + PP R Y +++ + G A + M P
Sbjct: 367 MCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPI 426
Query: 398 IVTYNTLLSGLCKEGFVDEGIQL 420
++ + GL G D +++
Sbjct: 427 SRCFDMVTDGLKNGGKHDLAMRI 449
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 111/278 (39%), Gaps = 1/278 (0%)
Query: 190 TCNMVIGGLCKRGYLKSAVDLVEDMSLS-GCSPDAITYNTIIRGMFDKGNFNEAVSFWKD 248
T +I K G++ AV+L + + GC YN+++ + D F+ A + +
Sbjct: 148 TLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRR 207
Query: 249 QLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGV 308
+RKG P TY +L+ C A E L++M+ G P + L+ G
Sbjct: 208 MIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGY 267
Query: 309 YEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNI 368
E ++S + G P+ T+N LI ++S G + ++ + TY
Sbjct: 268 LESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKT 327
Query: 369 MLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTN 428
++ + K G +D A L + V + P Y ++ G+C+ G D+ +
Sbjct: 328 LIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKA 387
Query: 429 CSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVP 466
P Y + I R G A EM G+VP
Sbjct: 388 HPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVP 425
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 109/264 (41%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N +L LC A LI M RK P + L+ G G++ + + ++ M
Sbjct: 186 NSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSR 245
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
G P +++I GL GYL+SA ++V M+ G PD T+N +I + G
Sbjct: 246 RGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEF 305
Query: 242 AVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVS 301
+ + + G + TY LI V + A +L + +G P Y ++
Sbjct: 306 CIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIK 365
Query: 302 FTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPP 361
+ G++++ + S++ + PN Y LI G + + L M E P
Sbjct: 366 GMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVP 425
Query: 362 TRVTYNIMLNGLCKSGLLDRAISL 385
++++ +GL G D A+ +
Sbjct: 426 ISRCFDMVTDGLKNGGKHDLAMRI 449
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 110/268 (41%), Gaps = 36/268 (13%)
Query: 326 PNAVTYNTLIHSLSSHGYWDG--------------------------------VDDVLEI 353
P ++ Y L SL+SH ++ VD +E+
Sbjct: 109 PTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVEL 168
Query: 354 MNETSSP----PTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLC 409
N T YN +L+ LC + A +L M+ + PD TY L++G C
Sbjct: 169 FNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWC 228
Query: 410 KEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEI 469
G + E + L ++ +P ++ I+GL G +ESAKE+ S+M G VPD
Sbjct: 229 SAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQ 288
Query: 470 THSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLM 529
T + L ++E +E+ K + Y+ +I + K K+D A + L+
Sbjct: 289 TFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNC 348
Query: 530 VRSRCKPDEKIYDALIKAVADSGMVKEA 557
V KP +Y +IK + +GM +A
Sbjct: 349 VEDGHKPFPSLYAPIIKGMCRNGMFDDA 376
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 112/261 (42%), Gaps = 10/261 (3%)
Query: 290 YP---DIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSH-GYWD 345
YP +I TY L+ A+ + E+ +L P N ++ L SH GY
Sbjct: 115 YPLTGEIFTY--LIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQ 172
Query: 346 GVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLL 405
++ + P +YN+++ C + L A L+ M+ PD+ +Y L+
Sbjct: 173 KAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILI 232
Query: 406 SGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIV 465
G C++G V+ ++LL + G V I GL G + K+ EMI KG
Sbjct: 233 QGFCRKGQVNGAMELL----DDMLNKGFVPDRTLIGGLCDQGMFDEGKKYLEEMISKGFS 288
Query: 466 PDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQA 525
P + L GFC ++EEA ++++ + K E + + VI +C + + +
Sbjct: 289 PHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLF 348
Query: 526 LDLMVRSRCKPDEKIYDALIK 546
L+ V+ D +I D I+
Sbjct: 349 LEDAVKEEITGDTRIVDVGIE 369
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 105/247 (42%), Gaps = 21/247 (8%)
Query: 325 QPNAVTYNTLIHSLSSH----------GYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLC 374
QPN HS SSH Y++ +DDVL + P T + ++
Sbjct: 77 QPN------FRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYA 130
Query: 375 KSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKE-GFVDEGIQLLYLLTGTNCSPGL 433
++ L ++ +S + M+ + P N +L L G++ + +L P
Sbjct: 131 EAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNT 190
Query: 434 VTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKE 493
+YN+ + + A +L+ +M+ + +VPD ++ L GFC Q+ AMELL +
Sbjct: 191 RSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDD 250
Query: 494 MHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGM 553
M K R +I GLC Q D + L+ M+ P + + L+K G
Sbjct: 251 MLNKG----FVPDRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGK 306
Query: 554 VKEANDL 560
V+EA D+
Sbjct: 307 VEEACDV 313
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 84/174 (48%), Gaps = 4/174 (2%)
Query: 201 RGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLIT 260
RGYL+ A +L + L G P+ +YN +++ + + A + L + P + +
Sbjct: 168 RGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDS 227
Query: 261 YTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLL 320
Y +LI+ CR A+E+L+DM +G PD +L+ QG+++E + ++
Sbjct: 228 YKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMI 283
Query: 321 SRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLC 374
S+G P+ N L+ S G + DV+E++ + T+ +++ +C
Sbjct: 284 SKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLIC 337
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 4/166 (2%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N ++Q C L A +L M + +P S LI+G + GQ++ ++++ M+
Sbjct: 194 NLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLN 253
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
G VPD +IGGLC +G +E+M G SP N +++G G E
Sbjct: 254 KGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEE 309
Query: 242 AVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAME 287
A + ++ G + T+ ++I L+C + + LED E
Sbjct: 310 ACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKE 355
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 5/162 (3%)
Query: 122 NKILQNLCT-RGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMV 180
N+IL L + RG L A L + +P+ S L++ + ++ M+
Sbjct: 158 NRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKML 217
Query: 181 MSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFN 240
VPDV + ++I G C++G + A++L++DM G PD T+I G+ D+G F+
Sbjct: 218 ERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFD 273
Query: 241 EAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLE 282
E + ++ + KG P+ L++ C + A +V+E
Sbjct: 274 EGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVE 315
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 126/297 (42%), Gaps = 8/297 (2%)
Query: 171 KGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSP-DAITYNTI 229
+ + +IM P ++ LC+ G+++ A + + ++ P D +N I
Sbjct: 207 QAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFM--LASKKLFPVDVEGFNVI 264
Query: 230 IRGMFD-KGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEG 288
+ G + + EA W++ P +Y+ +I + +L + ++M G
Sbjct: 265 LNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRG 324
Query: 289 CYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVD 348
P I YNSLV ++ ++E ++ L G++P++VTYN++I L G D
Sbjct: 325 LAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVAR 384
Query: 349 DVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGL 408
+VL M + PT T++ L + ++ + + M P T+ +L L
Sbjct: 385 NVLATMISENLSPTVDTFHAFLEAVN----FEKTLEVLGQMKISDLGPTEETFLLILGKL 440
Query: 409 CKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIV 465
K + +++ + Y I GL G +E A+E+YSEM KG V
Sbjct: 441 FKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKGFV 497
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 120/248 (48%), Gaps = 5/248 (2%)
Query: 251 RKGCPPYLITYTVLIELVCR-YCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVY 309
+K P + + V++ C + A + +M P+ +Y+ ++S +K G
Sbjct: 251 KKLFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNL 310
Query: 310 EETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIM 369
++ + + RG+ P YN+L++ L+ +D +++ +NE P VTYN M
Sbjct: 311 FDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSM 370
Query: 370 LNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNC 429
+ LC++G LD A ++ +TM+SE+ P + T++ L + E + +++L + ++
Sbjct: 371 IRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVNFE----KTLEVLGQMKISDL 426
Query: 430 SPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAME 489
P T+ + + L + E+A ++++EM IV + + + G LE+A E
Sbjct: 427 GPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKARE 486
Query: 490 LLKEMHKK 497
+ EM K
Sbjct: 487 IYSEMKSK 494
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 98/201 (48%), Gaps = 4/201 (1%)
Query: 350 VLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFP-DIVTYNTLLSGL 408
+IM++ P + +L LC+ G +++A + S+ FP D+ +N +L+G
Sbjct: 211 TFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEF--MLASKKLFPVDVEGFNVILNGW 268
Query: 409 CKEGFVDEGIQLLYLLTGTNC-SPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPD 467
C + ++ G C +P +Y+ I +++G++ + LY EM +G+ P
Sbjct: 269 CNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPG 328
Query: 468 EITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALD 527
++SL + D +EAM+L+K+++++ K Y +I LC+ K+D+A L
Sbjct: 329 IEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLA 388
Query: 528 LMVRSRCKPDEKIYDALIKAV 548
M+ P + A ++AV
Sbjct: 389 TMISENLSPTVDTFHAFLEAV 409
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 112/277 (40%), Gaps = 42/277 (15%)
Query: 117 DGFTNNKILQNLCT-RGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKI 175
+GF N IL C + A R+ M P+ S +++I K+G + ++
Sbjct: 259 EGF--NVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRL 316
Query: 176 INIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFD 235
+ M G P + N ++ L + A+ L++ ++ G PD++TYN++IR + +
Sbjct: 317 YDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCE 376
Query: 236 KGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIIT 295
G + A + + + P + T+ +E V + LEVL M + P
Sbjct: 377 AGKLDVARNVLATMISENLSPTVDTFHAFLEAV----NFEKTLEVLGQMKISDLGPT--- 429
Query: 296 YNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMN 355
EET+L+I L +G QP N L W +D
Sbjct: 430 --------------EETFLLILGKLFKGKQPE----NAL-------KIWAEMDRF----- 459
Query: 356 ETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSE 392
E + P Y + GL G L++A +YS M S+
Sbjct: 460 EIVANP--ALYLATIQGLLSCGWLEKAREIYSEMKSK 494
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 142/346 (41%), Gaps = 17/346 (4%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D T N +++ C G + A +L E M + +P N++ + G + I
Sbjct: 176 DVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIY 235
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
++ + D ++ G + A + MS+ + ++ G
Sbjct: 236 EFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVR----NLFVSTAMVSGYSKC 291
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
G ++A + +K L+ +T +I AL V E+M G PD+++
Sbjct: 292 GRLDDAQVIFDQTEKKD----LVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSM 347
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
S++S A G+ ++ V S + G++ N LI+ + G D DV E M
Sbjct: 348 FSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKM-- 405
Query: 357 TSSPPTR--VTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFV 414
P R V+++ M+N L G A+SL++ M E+ P+ VT+ +L G G V
Sbjct: 406 ----PRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLV 461
Query: 415 DEGIQLLYLLTGT-NCSPGLVTYNIAIDGLARMGSMESAKELYSEM 459
+EG ++ +T N +P L Y +D R + A E+ M
Sbjct: 462 EEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESM 507
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 140/332 (42%), Gaps = 27/332 (8%)
Query: 187 DVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGN--FNEAVS 244
DV+T N +I C+ G + A L E+M S PD + I+ GN +N A+
Sbjct: 176 DVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIY 235
Query: 245 FWKDQLRKGCPPYLITYTVLIELVCRYCGA---IRALEVLEDMAMEGCYPDIITYNSLVS 301
+ + +L+T LV Y GA A E M++ ++ ++VS
Sbjct: 236 EFLIENDVRMDTHLLT-----ALVTMYAGAGCMDMAREFFRKMSVR----NLFVSTAMVS 286
Query: 302 FTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPP 361
+K G ++ ++ + + + V + T+I + Y V E M + P
Sbjct: 287 GYSKCGRLDDAQVI----FDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKP 342
Query: 362 TRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLL 421
V+ +++ G+LD+A ++S + ++ N L++ K G +D +
Sbjct: 343 DVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVF 402
Query: 422 YLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGV 481
+ N +V+++ I+ L+ G A L++ M + + P+E+T + +G
Sbjct: 403 EKMPRRN----VVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHS 458
Query: 482 DQLEEAMELLKEM---HKKDEKIKHTAYRCVI 510
+EE ++ M + K++H Y C++
Sbjct: 459 GLVEEGKKIFASMTDEYNITPKLEH--YGCMV 488
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/410 (20%), Positives = 161/410 (39%), Gaps = 42/410 (10%)
Query: 160 IRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGC 219
+R L ++ ++ ++ + M G P+ CN + L + G ++ A + E M
Sbjct: 114 LRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKE- 172
Query: 220 SPDAITYNTIIRGMFDKGNFNEAVSFWKD----QLRKGCPPYLITYTVLIELVCRYCGAI 275
+ TY+ +++ + + A+ +++ R+ C ++ Y I L R
Sbjct: 173 NVTGHTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFD-VVLYNTAISLCGRINNVY 231
Query: 276 RALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLI 335
+ M +G ITY+ LVS + G E V +++ + +I
Sbjct: 232 ETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMI 291
Query: 336 HSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCF 395
+ + WD + + M + P V N ++N L K+G + +YS + S
Sbjct: 292 SACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHK 351
Query: 396 PDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTN-CSPGLVTYNIAIDGLARMGSMESAKE 454
PD T+N LL+ L K ++ +QL ++ N C YN A+ ++G E A +
Sbjct: 352 PDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVK 411
Query: 455 LYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLC 514
L EM G G+ + ++Y VI
Sbjct: 412 LLYEMEGSGLT-----------------------------------VSTSSYNLVISACE 436
Query: 515 KQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
K RK +A+ + M + CKP+ Y +L+++ + E D+ +++
Sbjct: 437 KSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDILKKV 486
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 132/309 (42%), Gaps = 6/309 (1%)
Query: 165 KIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAI 224
+I + + +I +M G + IT ++++ + G + A+D+ ++M + S
Sbjct: 226 RINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLRED 285
Query: 225 TYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDM 284
+I + ++ A+ ++ L+KG P L+ LI + + +V +
Sbjct: 286 AMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVL 345
Query: 285 AMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQ-PNAVTYNTLIHSLSSHGY 343
G PD T+N+L++ K YE+ + + S + N YNT + S GY
Sbjct: 346 KSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGY 405
Query: 344 WDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNT 403
W+ +L M + + +YN++++ KS A+ +Y M C P+ TY +
Sbjct: 406 WEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLS 465
Query: 404 LLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKG 463
L+ DE +L P + YN AI G+ + AKELY +M G
Sbjct: 466 LVRSCIWGSLWDEVEDIL-----KKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMG 520
Query: 464 IVPDEITHS 472
+ PD T +
Sbjct: 521 LEPDGKTRA 529
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 106/254 (41%), Gaps = 8/254 (3%)
Query: 159 LIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSG 218
+I K + D KI M+ G P+++ CN +I L K G + + + G
Sbjct: 290 MISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLG 349
Query: 219 CSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELV-CRYCGAI-R 276
PD T+N ++ ++ + + + + D +R L Y +V C+ G +
Sbjct: 350 HKPDEYTWNALLTALYKANRYEDVLQLF-DMIRSENLCCLNEYLYNTAMVSCQKLGYWEK 408
Query: 277 ALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIH 336
A+++L +M G +YN ++S K + LV ++ R +PN TY +L+
Sbjct: 409 AVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVR 468
Query: 337 SLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFP 396
S WD V+D+L+ P YN ++G+C A LY M P
Sbjct: 469 SCIWGSLWDEVEDILK-----KVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEP 523
Query: 397 DIVTYNTLLSGLCK 410
D T +L L K
Sbjct: 524 DGKTRAMMLQNLKK 537
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 162/401 (40%), Gaps = 46/401 (11%)
Query: 195 IGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGC 254
+ GLC G L+ A+ L+ M + D + ++R + WK +G
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVR-----------LCEWKRAQEEGS 114
Query: 255 PPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCY-------PDIITYNSLVSFTAKQG 307
Y I + + L A A+ V ++ Y ++ ++N LV AKQG
Sbjct: 115 KVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQG 174
Query: 308 VYEETYLVISNLL-SRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTY 366
++E + +L G++P+ T+ ++ + G+ D L E R Y
Sbjct: 175 YFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCG------GIPD-LARGKEVHVHVVRYGY 227
Query: 367 -------NIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQ 419
N ++ K G + A L+ M DI+++N ++SG + G EG++
Sbjct: 228 ELDIDVVNALITMYVKCGDVKSARLLFDRMPRR----DIISWNAMISGYFENGMCHEGLE 283
Query: 420 LLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFC 479
L + + G + P L+T I +G +++++ +I G D +SL +
Sbjct: 284 LFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYL 343
Query: 480 GVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEK 539
EA +L M +KD ++ +I G D AI +M + KPDE
Sbjct: 344 NAGSWREAEKLFSRMERKDI----VSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEI 399
Query: 540 IYDALIKAVADSGMVKEANDLHQ-----RLIEWKILKTEII 575
A++ A A G + +LH+ RLI + I+ +I
Sbjct: 400 TVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLI 440
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/450 (21%), Positives = 185/450 (41%), Gaps = 48/450 (10%)
Query: 139 RLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGL 198
R++ + K + FP ++R I + +G ++ +V G D+ N +I
Sbjct: 185 RMLWVGGVKPDVYTFPC---VLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMY 241
Query: 199 CKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYL 258
K G +KSA L + M D I++N +I G F+ G +E + + P L
Sbjct: 242 VKCGDVKSARLLFDRMP----RRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDL 297
Query: 259 ITYTVLIELVCRYCGAIR-ALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVIS 317
+T T +I C G R ++ + G DI NSL G + E
Sbjct: 298 MTLTSVIS-ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREA----E 352
Query: 318 NLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSG 377
L SR + + V++ T+I + D D +M++ S P +T +L+ G
Sbjct: 353 KLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLG 412
Query: 378 LLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLY------LLTGTNCSP 431
LD + L+ + ++ N L++ K +D+ + + + +++ T+
Sbjct: 413 DLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIA 472
Query: 432 GLVTYNIAIDGL------------------------ARMGSMESAKELYSEMIGKGIVPD 467
GL N + L AR+G++ KE+++ ++ G+ D
Sbjct: 473 GLRLNNRCFEALIFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLD 532
Query: 468 EITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALD 527
+ ++L + ++ A KKD T++ ++ G ++ + + ++ D
Sbjct: 533 DFLPNALLDMYVRCGRMNTAWSQFNS-QKKDV----TSWNILLTGYSERGQGSMVVELFD 587
Query: 528 LMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
MV+SR +PDE + +L+ + S MV++
Sbjct: 588 RMVKSRVRPDEITFISLLCGCSKSQMVRQG 617
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/315 (19%), Positives = 133/315 (42%), Gaps = 13/315 (4%)
Query: 187 DVITCNMVIGGLCKRGYLKSAVDLVEDM-SLSGCSPDAITYNTIIRGMFDKGNFNEAVSF 245
++ + N+++GG K+GY A+ L M + G PD T+ ++R +
Sbjct: 159 NLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEV 218
Query: 246 WKDQLRKGCPPYLITYTVLIELVCRY--CGAIRALEVLEDMAMEGCYPDIITYNSLVSFT 303
+R G Y + V+ L+ Y CG +++ +L D DII++N+++S
Sbjct: 219 HVHVVRYG---YELDIDVVNALITMYVKCGDVKSARLLFDRMPR---RDIISWNAMISGY 272
Query: 304 AKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTR 363
+ G+ E + + + P+ +T ++I + G D+ + T
Sbjct: 273 FENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDI 332
Query: 364 VTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYL 423
N + +G A L+S M + DIV++ T++SG D+ I +
Sbjct: 333 SVCNSLTQMYLNAGSWREAEKLFSRMERK----DIVSWTTMISGYEYNFLPDKAIDTYRM 388
Query: 424 LTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQ 483
+ + P +T + A +G +++ EL+ I ++ I ++L +
Sbjct: 389 MDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKC 448
Query: 484 LEEAMELLKEMHKKD 498
+++A+++ + +K+
Sbjct: 449 IDKALDIFHNIPRKN 463
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 136/351 (38%), Gaps = 46/351 (13%)
Query: 156 CTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMS 215
C +L + + G + K+ + M D+++ +I G A+D M
Sbjct: 335 CNSLTQMYLNAGSWREAEKLFSRMERK----DIVSWTTMISGYEYNFLPDKAIDTYRMMD 390
Query: 216 LSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAI 275
PD IT ++ G+ + V K ++ Y+I LI + + C I
Sbjct: 391 QDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSK-CKCI 449
Query: 276 -RALEVLEDMAMEGCYPDIITYNSLVS-FTAKQGVYEETYLVISNLLSRGMQPNAVTYNT 333
+AL++ ++ + ++I++ S+++ +E L+ + +QPNA+T
Sbjct: 450 DKALDIFHNIPRK----NVISWTSIIAGLRLNNRCFEA--LIFLRQMKMTLQPNAITLTA 503
Query: 334 LI------------HSLSSHGYWDGV--DDVL---------------EIMNETSSPPTRV 364
+ + +H GV DD L ++ +S V
Sbjct: 504 ALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQKKDV 563
Query: 365 T-YNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYL 423
T +NI+L G + G + L+ MV PD +T+ +LL G K V +G+
Sbjct: 564 TSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSK 623
Query: 424 LTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSL 474
+ +P L Y +D L R G ++ A + +M + PD +L
Sbjct: 624 MEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKM---PVTPDPAVWGAL 671
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 147/368 (39%), Gaps = 52/368 (14%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D + + ++ GRL A ++ + + + S T LI+G G I+ K+
Sbjct: 168 DLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVV----SYTALIKGYASRGYIENAQKLF 223
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
+ + V DV++ N +I G + G K A++L +DM + PD T T++
Sbjct: 224 DEI----PVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQS 279
Query: 237 GN--FNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIR-ALEVLEDMAMEGCYPDI 293
G+ V W D G L LI+L + CG + A + E + Y D+
Sbjct: 280 GSIELGRQVHLWIDD--HGFGSNLKIVNALIDLYSK-CGELETACGLFERLP----YKDV 332
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWD-------G 346
I++N+L+ +Y+E L+ +L G PN VT +++ + + G D
Sbjct: 333 ISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVY 392
Query: 347 VDDVLEIMNETSSPPTRV--------------------------TYNIMLNGLCKSGLLD 380
+D L+ + SS T + ++N M+ G G D
Sbjct: 393 IDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRAD 452
Query: 381 RAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLT-GTNCSPGLVTYNIA 439
+ L+S M PD +T+ LLS G +D G + +T +P L Y
Sbjct: 453 ASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCM 512
Query: 440 IDGLARMG 447
ID L G
Sbjct: 513 IDLLGHSG 520
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/398 (18%), Positives = 159/398 (39%), Gaps = 37/398 (9%)
Query: 186 PDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSF 245
P+++ N + G SA+ L M G P++ T+ +++ F E
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 246 WKDQLRKGCPPYLITYTVLIEL---------------------VCRYCGAIRA------L 278
L+ GC L +T LI + V Y I+ +
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 216
Query: 279 EVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSL 338
E + + E D++++N+++S A+ G Y+E + +++ ++P+ T T++ +
Sbjct: 217 ENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 276
Query: 339 SSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDI 398
+ G + V +++ N +++ K G L+ A L+ + + D+
Sbjct: 277 AQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLP----YKDV 332
Query: 399 VTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAK--ELY 456
+++NTL+ G E + L + + +P VT + A +G+++ + +Y
Sbjct: 333 ISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVY 392
Query: 457 SEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQ 516
+ KG+ +SL + +E A ++ + K +++ +I G
Sbjct: 393 IDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSL----SSWNAMIFGFAMH 448
Query: 517 RKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMV 554
+ D + M + +PD+ + L+ A + SGM+
Sbjct: 449 GRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGML 486
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 94/219 (42%), Gaps = 9/219 (4%)
Query: 343 YWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYN 402
+++G+ + + +T P + +N M G S A+ LY M+S P+ T+
Sbjct: 80 HFEGLPYAISVF-KTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFP 138
Query: 403 TLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGK 462
+L K EG Q+ + C L + I + G +E A +++ + +
Sbjct: 139 FVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHR 198
Query: 463 GIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIA 522
D +++++L G+ +E A +L E+ KD ++ +I G + A
Sbjct: 199 ----DVVSYTALIKGYASRGYIENAQKLFDEIPVKDV----VSWNAMISGYAETGNYKEA 250
Query: 523 IQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLH 561
++ M+++ +PDE ++ A A SG ++ +H
Sbjct: 251 LELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 289
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%)
Query: 281 LEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSS 340
LE M G PD+ TYN ++ + G +Y +++ + + ++P A ++ +I
Sbjct: 170 LEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYK 229
Query: 341 HGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVT 400
+D V V+ +M+E TYNIM+ LCK A +L ++S P+ VT
Sbjct: 230 EEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVT 289
Query: 401 YNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMI 460
Y+ L+ G C E +DE + L ++ P Y I L + G E+A L E +
Sbjct: 290 YSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESM 349
Query: 461 GKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKK 497
K VP L G +++EA EL+ + +K
Sbjct: 350 EKNWVPSFSVMKWLVNGLASRSKVDEAKELIAVVKEK 386
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 104/229 (45%)
Query: 193 MVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRK 252
++ L + Y ++ +E + G PD TYN +IR + + G+ + + S + RK
Sbjct: 152 LLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERK 211
Query: 253 GCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEET 312
P ++ ++I+ + +V+ M G + + TYN ++ K+ E
Sbjct: 212 WIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEA 271
Query: 313 YLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNG 372
+I ++S M+PN+VTY+ LIH S D ++ E+M P Y +++
Sbjct: 272 KALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHC 331
Query: 373 LCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLL 421
LCK G + A+ L + ++ P L++GL VDE +L+
Sbjct: 332 LCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELI 380
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 109/256 (42%), Gaps = 12/256 (4%)
Query: 317 SNLLSRGMQ----------PNAV-TYNTLIHS-LSSHGYWDGVDDVLEIMNETSSPPTRV 364
+N+L R +Q P V + N L+ + L + Y + LE+ P
Sbjct: 124 ANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLE 183
Query: 365 TYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLL 424
TYN M+ LC+SG + S+ + M + P ++ ++ G KE DE +++ ++
Sbjct: 184 TYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMM 243
Query: 425 TGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQL 484
G+ TYNI I L + AK L ++ + P+ +T+S L GFC + L
Sbjct: 244 DEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENL 303
Query: 485 EEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDAL 544
+EAM L + M K Y +I LCK + A+ + P + L
Sbjct: 304 DEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWL 363
Query: 545 IKAVADSGMVKEANDL 560
+ +A V EA +L
Sbjct: 364 VNGLASRSKVDEAKEL 379
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 74/151 (49%)
Query: 120 TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIM 179
T N++++ LC G ++ ++ M RK P S +I G K + D+ K++ +M
Sbjct: 184 TYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMM 243
Query: 180 VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNF 239
G V T N++I LCKR A L++ + P+++TY+ +I G + N
Sbjct: 244 DEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENL 303
Query: 240 NEAVSFWKDQLRKGCPPYLITYTVLIELVCR 270
+EA++ ++ + G P Y LI +C+
Sbjct: 304 DEAMNLFEVMVCNGYKPDSECYFTLIHCLCK 334
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 108/253 (42%), Gaps = 6/253 (2%)
Query: 317 SNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYN---IMLNGL 373
S LS + + ++ + +L+ ++ V +L+ + P ++ I+L G
Sbjct: 64 STSLSPDYHVDRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQPDPKSESFAVRAIILYG- 122
Query: 374 CKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSG-LCKEGFVDEGIQLLYLLTGTNCSPG 432
++ +LDR+I + + + + N LL L + + + L + P
Sbjct: 123 -RANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPD 181
Query: 433 LVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLK 492
L TYN I L GS S+ + +EM K I P + + GF ++ +E ++++
Sbjct: 182 LETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMR 241
Query: 493 EMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSG 552
M + + Y +I LCK++K A +D ++ R +P+ Y LI
Sbjct: 242 MMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEE 301
Query: 553 MVKEANDLHQRLI 565
+ EA +L + ++
Sbjct: 302 NLDEAMNLFEVMV 314
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 139/329 (42%), Gaps = 17/329 (5%)
Query: 190 TCNMVIGGLCKRGYLKSAVD-------LVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEA 242
T +V+G + K ++ V+ LV D + C +N ++R + + + +A
Sbjct: 146 TMQVVLGRVAKLCSVRQTVESFWKFKRLVPDFFDTAC------FNALLRTLCQEKSMTDA 199
Query: 243 VSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSF 302
+ + L+ P L T+ +L+ + + A E+M +G PD++TYNSL+
Sbjct: 200 RNVYH-SLKHQFQPDLQTFNILL---SGWKSSEEAEAFFEEMKGKGLKPDVVTYNSLIDV 255
Query: 303 TAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPT 362
K E+ Y +I + P+ +TY T+I L G D +VL+ M E P
Sbjct: 256 YCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPD 315
Query: 363 RVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLY 422
YN + C + L A L MV + P+ TYN L + +L
Sbjct: 316 VAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYV 375
Query: 423 LLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVD 482
+ G C P + I R ++ A L+ +M+ KG + L C +
Sbjct: 376 RMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLA 435
Query: 483 QLEEAMELLKEMHKKDEKIKHTAYRCVIL 511
++EEA + L EM +K + + +++ + L
Sbjct: 436 KVEEAEKCLLEMVEKGHRPSNVSFKRIKL 464
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 109/250 (43%), Gaps = 6/250 (2%)
Query: 105 GKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLI 164
GK +KP D T N ++ C + A +LI+ M + + P + T +I GL
Sbjct: 239 GKGLKP------DVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLG 292
Query: 165 KIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAI 224
IGQ DK +++ M G PDV N I C L A LV++M G SP+A
Sbjct: 293 LIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNAT 352
Query: 225 TYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDM 284
TYN R + + + + L C P + LI++ R+ A+ + EDM
Sbjct: 353 TYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDM 412
Query: 285 AMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYW 344
++G + + L+ EE + ++ +G +P+ V++ + +
Sbjct: 413 VVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKH 472
Query: 345 DGVDDVLEIM 354
D V+++++ M
Sbjct: 473 DEVNNLIQKM 482
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 96/200 (48%), Gaps = 4/200 (2%)
Query: 366 YNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLT 425
+N +L LC+ + A ++Y ++ PD+ T+N LLSG +E +
Sbjct: 183 FNALLRTLCQEKSMTDARNVYHSL-KHQFQPDLQTFNILLSGW---KSSEEAEAFFEEMK 238
Query: 426 GTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLE 485
G P +VTYN ID + +E A +L +M + PD IT++++ G + Q +
Sbjct: 239 GKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPD 298
Query: 486 EAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALI 545
+A E+LKEM + AY I C R++ A + +D MV+ P+ Y+
Sbjct: 299 KAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFF 358
Query: 546 KAVADSGMVKEANDLHQRLI 565
+ ++ + + + +L+ R++
Sbjct: 359 RVLSLANDLGRSWELYVRML 378
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 116/249 (46%), Gaps = 10/249 (4%)
Query: 322 RGMQPNAVTYNTLIHSLSSHGYWDGVDDVL-EIMNETSSPPTRVTYNIMLN---GLCKSG 377
RG ++ + +T+++ L + +D + ++L E + S + T ++L LC
Sbjct: 102 RGFYHSSFSLDTMLYILGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVR 161
Query: 378 LLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYN 437
+ + +V + F D +N LL LC+E + + + + L P L T+N
Sbjct: 162 QTVESFWKFKRLVPD--FFDTACFNALLRTLCQEKSMTDARNVYHSLKH-QFQPDLQTFN 218
Query: 438 IAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKK 497
I + G E+ EM GKG+ PD +T++SL +C ++E+A +L+ +M ++
Sbjct: 219 ILLSGWKSSEEAEAFF---EEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREE 275
Query: 498 DEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
+E Y VI GL + D A + L M C PD Y+A I+ + + +A
Sbjct: 276 EETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDA 335
Query: 558 NDLHQRLIE 566
+ L +++
Sbjct: 336 DKLVDEMVK 344
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 64/149 (42%)
Query: 144 MARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGY 203
M K P + +LI K +I+K K+I+ M PDVIT VIGGL G
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 204 LKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTV 263
A +++++M GC PD YN IR +A + ++KG P TY +
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356
Query: 264 LIELVCRYCGAIRALEVLEDMAMEGCYPD 292
++ R+ E+ M C P+
Sbjct: 357 FFRVLSLANDLGRSWELYVRMLGNECLPN 385
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 116/244 (47%), Gaps = 11/244 (4%)
Query: 321 SRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLD 380
S G + Y+ + SL+S G +D +++ + M P +TY+ ++ GLCK+ L+
Sbjct: 363 STGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLE 422
Query: 381 RAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLL--YLLTGTNCSPGLVTYNI 438
A + M ++ CFPDI T+ L+ G CK +D+ + L G + L+ ++
Sbjct: 423 EARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLL--DV 480
Query: 439 AIDGLARMGSMESAKELYSEMIGKG-IVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKK 497
IDG E A EM+ + P + T+ L + + EEA++LL+ M K+
Sbjct: 481 LIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQ 540
Query: 498 DEKIKHTAYRCVILG-LCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKE 556
+ + AY G L K ++ A + LD++ S+ P Y +I+A G + +
Sbjct: 541 N----YPAYAEAFDGYLAKFGTLEDAKKFLDVL-SSKDSPSFAAYFHVIEAFYREGRLTD 595
Query: 557 ANDL 560
A +L
Sbjct: 596 AKNL 599
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 112/264 (42%), Gaps = 40/264 (15%)
Query: 161 RGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCS 220
R L +G+ D+ +I M +G PD IT + ++ GLCK L+ A +++ M GC
Sbjct: 378 RSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCF 437
Query: 221 PDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEV 280
PD T+ +I+G ++A++ + + L KG + I +L
Sbjct: 438 PDIKTWTILIQGHCKNNELDKALACFANMLEKG---FDIDSNLL---------------- 478
Query: 281 LEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSS 340
D+ ++G + +N +G + ++ + + ++P TY LI L
Sbjct: 479 --DVLIDG----FVIHNKF------EGA---SIFLMEMVKNANVKPWQSTYKLLIDKLLK 523
Query: 341 HGYWDGVDDVLEIMNETSSPPTRVTYNIMLNG-LCKSGLLDRAISLYSTMVSESCFPDIV 399
+ D+L++M + + P Y +G L K G L+ A + S+ P
Sbjct: 524 IKKSEEALDLLQMMKKQNYP----AYAEAFDGYLAKFGTLEDAKKFLDVLSSKDS-PSFA 578
Query: 400 TYNTLLSGLCKEGFVDEGIQLLYL 423
Y ++ +EG + + LL++
Sbjct: 579 AYFHVIEAFYREGRLTDAKNLLFI 602
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 96/220 (43%), Gaps = 5/220 (2%)
Query: 124 ILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSG 183
I ++L + GR A + + M P + + L+ GL K ++++ +++ M G
Sbjct: 376 IHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQG 435
Query: 184 GVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAV 243
PD+ T ++I G CK L A+ +M G D+ + +I G F A
Sbjct: 436 CFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGAS 495
Query: 244 SFWKDQLRKG-CPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSF 302
F + ++ P+ TY +LI+ + + + AL++L+ M + YP + +
Sbjct: 496 IFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQN-YPAYA--EAFDGY 552
Query: 303 TAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHG 342
AK G E+ + ++LS P+ Y +I + G
Sbjct: 553 LAKFGTLEDAKKFL-DVLSSKDSPSFAAYFHVIEAFYREG 591
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 115/274 (41%), Gaps = 3/274 (1%)
Query: 226 YNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMA 285
Y+T+IR FN A+ ++ + G P +++ L+ + ++ +++
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 286 ME--GCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGY 343
PD I+Y L+ G E+ ++ + +GM+ + + T++ SL G
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 344 WDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNT 403
+ D++ M + YN+ + K +R L M S PD ++YN
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESP-ERVKELIEEMSSMGLKPDTISYNY 283
Query: 404 LLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKG 463
L++ C+ G +DE ++ L G NC+P T+ I L E ++ + +
Sbjct: 284 LMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMH 343
Query: 464 IVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKK 497
+PD T L G + ++A L++ + KK
Sbjct: 344 KIPDFNTLKHLVVGLVENKKRDDAKGLIRTVKKK 377
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 1/154 (0%)
Query: 185 VPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVS 244
+PD I+ ++I C G + A++++ M G I + TI+ ++ KG A +
Sbjct: 171 IPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADN 230
Query: 245 FWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTA 304
W + ++KGC Y V I + + R E++E+M+ G PD I+YN L++
Sbjct: 231 LWNEMVKKGCELDNAAYNVRI-MSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYC 289
Query: 305 KQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSL 338
++G+ +E V L PNA T+ TLI L
Sbjct: 290 ERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHL 323
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 101/224 (45%), Gaps = 3/224 (1%)
Query: 296 YNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMN 355
Y++L+ + ++ + G +AV++N L+++ +D V + + +
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 356 ETSSP--PTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
+ + P +++Y I++ C SG ++AI + M + + + T+LS L K+G
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSS 473
++ L + C YN+ I A+ S E KEL EM G+ PD I+++
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYNVRIMS-AQKESPERVKELIEEMSSMGLKPDTISYNY 283
Query: 474 LAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQR 517
L +C L+EA ++ + + + +R +I LC R
Sbjct: 284 LMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSR 327
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 79/168 (47%), Gaps = 7/168 (4%)
Query: 401 YNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMI 460
Y+TL+ + + ++ + V++N ++ + + +L+ E+
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 461 GK--GIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRK 518
+ I+PD+I++ L +C E+A+E++++M K ++ A+ ++ L K+ +
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 519 VDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
+++A + MV+ C+ D Y+ I + KE+ + + LIE
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYNVRIMSAQ-----KESPERVKELIE 267
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 133/306 (43%), Gaps = 22/306 (7%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
+ +D F N +L T G L+ A R+ M + + ++I G K G ID+
Sbjct: 157 LEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVV----AWNSMIMGFAKCGLIDQAQ 212
Query: 174 KIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM 233
+ + M GV + N +I G + G K A+D+ +M PD T +++
Sbjct: 213 NLFDEMPQRNGV----SWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNAC 268
Query: 234 FDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAI-RALEVLEDMAMEGCYP- 291
G + + +R I T LI++ C+ CG I L V E C P
Sbjct: 269 AYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCK-CGCIEEGLNVFE------CAPK 321
Query: 292 -DIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDV 350
+ +NS++ A G E + S L G++P++V++ ++ + + G D+
Sbjct: 322 KQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEF 381
Query: 351 LEIMNETSS-PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLC 409
+M E P+ Y +M+N L +GLL+ A +L M E D V +++LLS
Sbjct: 382 FRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEE---DTVIWSSLLSACR 438
Query: 410 KEGFVD 415
K G V+
Sbjct: 439 KIGNVE 444
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 154/373 (41%), Gaps = 26/373 (6%)
Query: 192 NMVIGGLCKRGYLKSAVDLVEDMSLSGCS--PDAITYNTIIRGMFDKGNFNEAVSFWKDQ 249
N +I G + + + A+ + DM S S P +TY ++ + G +
Sbjct: 93 NTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMV 152
Query: 250 LRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVY 309
+++G ++ + I A + + M G D++ +NS++ AK G+
Sbjct: 153 IKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIF--LGMIGF--DVVAWNSMIMGFAKCGLI 208
Query: 310 EETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIM 369
++ NL Q N V++N++I +G + D+ M E P T +
Sbjct: 209 DQA----QNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSL 264
Query: 370 LNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNC 429
LN G ++ ++ +V + + L+ CK G ++EG+ + C
Sbjct: 265 LNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVF------EC 318
Query: 430 SPG--LVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSL--AWGFCG-VDQL 484
+P L +N I GLA G E A +L+SE+ G+ PD ++ + A G V +
Sbjct: 319 APKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRA 378
Query: 485 EEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDAL 544
+E L+KE + + IKH +LG + +A L+ + D I+ +L
Sbjct: 379 DEFFRLMKEKYMIEPSIKHYTLMVNVLG-----GAGLLEEAEALIKNMPVEEDTVIWSSL 433
Query: 545 IKAVADSGMVKEA 557
+ A G V+ A
Sbjct: 434 LSACRKIGNVEMA 446
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 82/436 (18%), Positives = 176/436 (40%), Gaps = 64/436 (14%)
Query: 150 IPHFPSCTNLIRGLIKIGQIDKGC-------KIINIMVMSGGVPDVITCNMVIGGLCKRG 202
+P PS +L G + ID C +I ++ +G + D +T + V+ C
Sbjct: 13 VPAMPSSGSL-SGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCAS- 70
Query: 203 YLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYT 262
S ++ + + +NTIIRG F + +F E + +
Sbjct: 71 --PSDMNYAYLVFTRINHKNPFVWNTIIRG-FSRSSFPE-----------------MAIS 110
Query: 263 VLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSR 322
+ I+++C + P +TY S+ + G + + ++
Sbjct: 111 IFIDMLC---------------SSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKE 155
Query: 323 GMQPNAVTYNTLIHSLSSHG----YWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGL 378
G++ ++ NT++H + G W ++ V +N M+ G K GL
Sbjct: 156 GLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGF--------DVVAWNSMIMGFAKCGL 207
Query: 379 LDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNI 438
+D+A +L+ M + V++N+++SG + G + + + + + P T
Sbjct: 208 IDQAQNLFDEMPQRNG----VSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVS 263
Query: 439 AIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKD 498
++ A +G+ E + ++ ++ + I ++L +C +EE + + + KK
Sbjct: 264 LLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKK- 322
Query: 499 EKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEAN 558
+ + + +ILGL + A+ + RS +PD + ++ A A SG V A+
Sbjct: 323 ---QLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRAD 379
Query: 559 DLHQRLIEWKILKTEI 574
+ + + E +++ I
Sbjct: 380 EFFRLMKEKYMIEPSI 395
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 133/281 (47%), Gaps = 12/281 (4%)
Query: 276 RALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLI 335
R+L + + M + T+ SL+ + +EET + + + G + + N+LI
Sbjct: 98 RSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLI 157
Query: 336 HSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCF 395
+S + G + + ++ + P V++N ++ G K+G +D A++L+ M ++
Sbjct: 158 NSYAVTGNFK----LAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNA- 212
Query: 396 PDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKEL 455
+++ T++SG + E +QL + + ++ P V+ A+ A++G++E K +
Sbjct: 213 ---ISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWI 269
Query: 456 YSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCK 515
+S + I D + L + ++EEA+E+ K + KK + A+ +I G
Sbjct: 270 HSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQ----AWTALISGYAY 325
Query: 516 QRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKE 556
AI M + KP+ + A++ A + +G+V+E
Sbjct: 326 HGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEE 366
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 149/360 (41%), Gaps = 25/360 (6%)
Query: 110 PPPFVRNDGFTN-NKILQNLCTRGRLMA--AARLIEIMARK--SQIPH----FPSCTNLI 160
P + DGF + L NL RG + R + + R S PH FPS L+
Sbjct: 66 PYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPS---LL 122
Query: 161 RGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCS 220
+ + ++ +I + G DV N +I G K A L + +
Sbjct: 123 KACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIP----E 178
Query: 221 PDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEV 280
PD +++N++I+G G + A++ ++ K I++T +I + AL++
Sbjct: 179 PDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNA----ISWTTMISGYVQADMNKEALQL 234
Query: 281 LEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSS 340
+M PD ++ + +S A+ G E+ + S L ++ ++V LI +
Sbjct: 235 FHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAK 294
Query: 341 HGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVT 400
G +++ LE+ + + +++G G AIS + M P+++T
Sbjct: 295 CG---EMEEALEVFKNIKKKSVQA-WTALISGYAYHGHGREAISKFMEMQKMGIKPNVIT 350
Query: 401 YNTLLSGLCKEGFVDEGIQLLYLLT-GTNCSPGLVTYNIAIDGLARMGSMESAKELYSEM 459
+ +L+ G V+EG + Y + N P + Y +D L R G ++ AK EM
Sbjct: 351 FTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEM 410
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 90/209 (43%), Gaps = 8/209 (3%)
Query: 361 PTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQL 420
P +N+M+ G S +R++ LY M+ S + T+ +LL +E Q+
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI 137
Query: 421 LYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCG 480
+T + N I+ A G+ + A L+ + PD+++ +S+ G+
Sbjct: 138 HAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPE----PDDVSWNSVIKGYVK 193
Query: 481 VDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKI 540
+++ A+ L ++M +K+ ++ +I G + A+Q M S +PD
Sbjct: 194 AGKMDIALTLFRKMAEKNA----ISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVS 249
Query: 541 YDALIKAVADSGMVKEANDLHQRLIEWKI 569
+ A A G +++ +H L + +I
Sbjct: 250 LANALSACAQLGALEQGKWIHSYLNKTRI 278
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/487 (19%), Positives = 203/487 (41%), Gaps = 72/487 (14%)
Query: 118 GFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIIN 177
GF +N+I N R + +A + + + + + GL ++ +
Sbjct: 151 GFDDNQIALNFVVR--MKSAGVVFDAFTYSTALSFCVGSEGFLLGL----------QLQS 198
Query: 178 IMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKG 237
+V +G D++ N I + G + A + ++MS D I++N+++ G+ +G
Sbjct: 199 TVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSF----KDMISWNSLLSGLSQEG 254
Query: 238 NFN-EAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
F EAV ++D +R+G +++T +I C ++ + + ++ Y ++
Sbjct: 255 TFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETD-LKLARQIHGLCIKRGYESLLEV 313
Query: 297 -NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEI-- 353
N L+S +K GV E V + R N V++ T+I S DD + I
Sbjct: 314 GNILMSRYSKCGVLEAVKSVFHQMSER----NVVSWTTMISS--------NKDDAVSIFL 361
Query: 354 -MNETSSPPTRVTYNIMLN---------------GLC-KSGLL------DRAISLYSTM- 389
M P VT+ ++N GLC K+G + + I+LY+
Sbjct: 362 NMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFE 421
Query: 390 --------VSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAID 441
+ F +I+++N ++SG + GF E ++ ++L P T+ ++
Sbjct: 422 ALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALK-MFLSAAAETMPNEYTFGSVLN 480
Query: 442 GLARMG--SMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDE 499
+A S++ + ++ ++ G+ + S+L + ++E+ ++ EM +K++
Sbjct: 481 AIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQ 540
Query: 500 KIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEAND 559
+ + +I + + M++ PD + +++ A GMV + +
Sbjct: 541 FV----WTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYE 596
Query: 560 LHQRLIE 566
+ +IE
Sbjct: 597 IFNMMIE 603
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 127/295 (43%), Gaps = 43/295 (14%)
Query: 168 QIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYN 227
QI +G KI + + +G V + N I K L+ A ED++ + I++N
Sbjct: 387 QIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFR----EIISWN 442
Query: 228 TIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAME 287
+I G G +EA+ + + P YT + + A+ ED+++
Sbjct: 443 AMISGFAQNGFSHEALKMFLSAAAETMPN---EYT--------FGSVLNAIAFAEDISV- 490
Query: 288 GCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGV 347
KQG ++LL G+ V + L+ + G +
Sbjct: 491 -----------------KQG-----QRCHAHLLKLGLNSCPVVSSALLDMYAKRG---NI 525
Query: 348 DDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSG 407
D+ ++ NE S + + +++ G + ++L+ M+ E+ PD+VT+ ++L+
Sbjct: 526 DESEKVFNEMS-QKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTA 584
Query: 408 LCKEGFVDEGIQLLYLLTGT-NCSPGLVTYNIAIDGLARMGSMESAKELYSEMIG 461
++G VD+G ++ ++ N P Y+ +D L R G ++ A+EL SE+ G
Sbjct: 585 CNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPG 639
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 135/339 (39%), Gaps = 51/339 (15%)
Query: 133 RLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKI----GQIDKGCKIINIMVMSGGVPDV 188
R + AR + I Q+ +F + + + + G + +GC+I SG V
Sbjct: 52 RRNSPARALSIFKENLQLGYFGRHMDEVTLCLALKACRGDLKRGCQIHGFSTTSGFTSFV 111
Query: 189 ITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKD 248
N V+G K G +A+ + E++ PD +++NTI+ G D +
Sbjct: 112 CVSNAVMGMYRKAGRFDNALCIFENL----VDPDVVSWNTILSGFDD------------N 155
Query: 249 QLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGV 308
Q+ AL + M G D TY++ +SF
Sbjct: 156 QI--------------------------ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEG 189
Query: 309 YEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNI 368
+ + S ++ G++ + V N+ I S G + G V + M S +++N
Sbjct: 190 FLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEM----SFKDMISWNS 245
Query: 369 MLNGLCKSGLLD-RAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGT 427
+L+GL + G A+ ++ M+ E D V++ ++++ C E + Q+ L
Sbjct: 246 LLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKR 305
Query: 428 NCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVP 466
L NI + ++ G +E+ K ++ +M + +V
Sbjct: 306 GYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVS 344
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/449 (19%), Positives = 181/449 (40%), Gaps = 51/449 (11%)
Query: 150 IPHFPSCTNLIRGLIKIGQIDKGCKIINIMV---MSGGVPDVITCNMVIGGLCKRGYLKS 206
+P +C+NLIR I+ D+ +I + ++ S V + + G K S
Sbjct: 136 LPDGQTCSNLIRSCIR----DRKFRITHCLLSVFRSDKSLAVSASDAAMKGFNKLQMYSS 191
Query: 207 AVDLVEDMSLS-GCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLIT----- 260
+ + + + S G P Y I+ G ++ V ++ + + +L
Sbjct: 192 TIQVFDRLKQSVGVEPSPGCYCRIMEAHEKIGENHKVVELFQ-EFKSQRLSFLAKESGSI 250
Query: 261 YTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTA---------------- 304
YT++ + + A ALEVLE+M +G Y+ L+ A
Sbjct: 251 YTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAG 310
Query: 305 -------------------KQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSH-GYW 344
++G E T V++ + ++ +++ S G+
Sbjct: 311 GKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFA 370
Query: 345 DGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTL 404
+ V V E + +VTY I +N C+ ++A L+ MV + +V Y+ +
Sbjct: 371 EAVK-VYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNI 429
Query: 405 LSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGI 464
+ K + + ++L+ + C P + YN ID R + A++++ EM +
Sbjct: 430 MDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKV 489
Query: 465 VPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQ 524
+PD+++++S+ + +LE +EL +E KI ++ K ++D ++
Sbjct: 490 LPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMR 549
Query: 525 ALDLMVRSRCKPDEKIYDALIKAVADSGM 553
L M + D ++Y + + A+ D+G+
Sbjct: 550 LLQDMKVEGTRLDARLYSSALNALRDAGL 578
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 6/216 (2%)
Query: 185 VPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVS 244
PD I+ M+I C G + A++++ DM + G I + TI+ ++ G +EA S
Sbjct: 171 TPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAES 230
Query: 245 FWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTA 304
W + + KGC Y V + + R E++E+M+ G PD ++YN L++
Sbjct: 231 LWIEMVNKGCDLDNTVYNVRLMNAAKESPE-RVKELMEEMSSVGLKPDTVSYNYLMTAYC 289
Query: 305 KQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRV 364
+G+ E V L QPNA T+ TLI L +G +D V + P
Sbjct: 290 VKGMMSEAKKVYEGL----EQPNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFK 345
Query: 365 TYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVT 400
T + GL K+ ++ A + + +V + P +VT
Sbjct: 346 TCKHLTEGLVKNNRMEDARGV-ARIVKKKFPPRLVT 380
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 118/295 (40%), Gaps = 7/295 (2%)
Query: 125 LQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGG 184
+Q L R LIE +I + LIR + D K+ M G
Sbjct: 74 VQRLAKSQRFSDIEALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGT 133
Query: 185 VPDVITCNMVIGGLCKRGYLKSAVDLVEDM--SLSGCSPDAITYNTIIRGMFDKGNFNEA 242
V++ N ++ + L ++ + +PD I+Y +I+ D G +A
Sbjct: 134 PRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKA 193
Query: 243 VSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSF 302
+ +D KG +I +T ++ + + A + +M +GC D YN +
Sbjct: 194 MEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRLMN 253
Query: 303 TAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPT 362
AK+ E ++ + S G++P+ V+YN L+ + G V E + + P
Sbjct: 254 AAKESP-ERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLEQ----PN 308
Query: 363 RVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEG 417
T+ ++ LC +GL D+ ++++ PD T L GL K +++
Sbjct: 309 AATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNNRMEDA 363
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 132/331 (39%), Gaps = 50/331 (15%)
Query: 256 PYLITYTVLIELVCRYCGAI---RALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEET 312
P + T T L L+ Y A A+++ E+M G ++++N+L++ ++E
Sbjct: 97 PKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERV 156
Query: 313 YLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNG 372
+ R YN + P +++Y +++
Sbjct: 157 PQLFDEFPQR--------YNNIT-------------------------PDKISYGMLIKS 183
Query: 373 LCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPG 432
C SG ++A+ + M + I+ + T+L L K G VDE L + C
Sbjct: 184 YCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLD 243
Query: 433 LVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLK 492
YN+ + A+ S E KEL EM G+ PD ++++ L +C + EA K
Sbjct: 244 NTVYNVRLMNAAK-ESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEA----K 298
Query: 493 EMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSG 552
++++ E+ +R +I LC D + PD K L + + +
Sbjct: 299 KVYEGLEQPNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNN 358
Query: 553 MVKEANDLHQ--------RLI-EWKILKTEI 574
+++A + + RL+ EWK L+ ++
Sbjct: 359 RMEDARGVARIVKKKFPPRLVTEWKKLEEKL 389
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/419 (21%), Positives = 170/419 (40%), Gaps = 60/419 (14%)
Query: 186 PDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGM-FDKGNFNEAVS 244
PDV+ N +I G K V L +M G +PD+ T+ ++ G+ D G
Sbjct: 97 PDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKK 156
Query: 245 FWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAM----EGCYPDIITYNSLV 300
++ G L L+++ CG L DMA C D+ ++N ++
Sbjct: 157 LHCHVVKFGLGSNLYVQNALVKMYS-LCG-------LMDMARGVFDRRCKEDVFSWNLMI 208
Query: 301 SFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSP 360
S + YEE+ ++ + + P +VT ++ + S D V E ++E +
Sbjct: 209 SGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTE 268
Query: 361 PTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQL 420
P+ N ++N G +D A+ ++ +M + D++++ +++ G + G ++L
Sbjct: 269 PSLRLENALVNAYAACGEMDIAVRIFRSMKAR----DVISWTSIVKGYVERG----NLKL 320
Query: 421 LYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSL------ 474
+++ I IDG R G + E++ EM G++PDE T S+
Sbjct: 321 ARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAH 380
Query: 475 -------AWGFCGVDQ----------------------LEEAMELLKEMHKKDEKIKHTA 505
W +D+ E+A ++ +M ++D K TA
Sbjct: 381 LGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRD-KFTWTA 439
Query: 506 YRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
+++GL + AI+ M +PD+ Y ++ A SGMV +A ++
Sbjct: 440 ---MVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKM 495
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/450 (18%), Positives = 179/450 (39%), Gaps = 51/450 (11%)
Query: 151 PHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRG-------- 202
P N+I+G K+ +G ++ M+ G PD T ++ GL + G
Sbjct: 97 PDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKK 156
Query: 203 --------------YLKSAVDLVEDMSLSG------------CSPDAITYNTIIRGMFDK 236
Y+++A LV+ SL G C D ++N +I G
Sbjct: 157 LHCHVVKFGLGSNLYVQNA--LVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRM 214
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
+ E++ + R P +T +++ + V E ++ P +
Sbjct: 215 KEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLE 274
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
N+LV+ A G + + ++ +R + +++ +++ G + M
Sbjct: 275 NALVNAYAACGEMDIAVRIFRSMKAR----DVISWTSIVKGYVERGNLKLARTYFDQM-- 328
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDE 416
R+++ IM++G ++G + ++ ++ M S PD T ++L+ G ++
Sbjct: 329 --PVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEI 386
Query: 417 GIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAW 476
G + + +V N ID + G E A++++ +M + D+ T +++
Sbjct: 387 GEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR----DKFTWTAMVV 442
Query: 477 GFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRS--RC 534
G Q +EA+++ +M + Y V+ VD A + M RS R
Sbjct: 443 GLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKM-RSDHRI 501
Query: 535 KPDEKIYDALIKAVADSGMVKEANDLHQRL 564
+P Y ++ + +G+VKEA ++ +++
Sbjct: 502 EPSLVHYGCMVDMLGRAGLVKEAYEILRKM 531
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 137/294 (46%), Gaps = 14/294 (4%)
Query: 221 PDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEV 280
P +NT+IRG + +F EA+ F+ + +++G P TY L++ C +IR +
Sbjct: 95 PCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLK-ACTRLKSIREGKQ 153
Query: 281 LEDMAME-GCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLS 339
+ + G D+ NSL++ + G E + V L S+ A ++++++ + +
Sbjct: 154 IHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESK----TAASWSSMVSARA 209
Query: 340 SHGYWDGVDDVLEIM-NETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDI 398
G W + M +ET+ L +G L+ +S++ ++ +I
Sbjct: 210 GMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNI 269
Query: 399 VTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSE 458
+ +L+ K G +D+ + + + N +TY+ I GLA G ESA ++S+
Sbjct: 270 IVQTSLVDMYVKCGCLDKALHIFQKMEKRNN----LTYSAMISGLALHGEGESALRMFSK 325
Query: 459 MIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTA--YRCVI 510
MI +G+ PD + + S+ ++E + EM K+ K++ TA Y C++
Sbjct: 326 MIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEM-LKEGKVEPTAEHYGCLV 378
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 84/174 (48%), Gaps = 10/174 (5%)
Query: 235 DKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAI-RALEVLEDMAMEGCYPDI 293
+ G N +S LR +I T L+++ + CG + +AL + + M +
Sbjct: 246 NTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVK-CGCLDKALHIFQKMEKR----NN 300
Query: 294 ITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYW-DGVDDVLE 352
+TY++++S A G E + S ++ G++P+ V Y +++++ S G +G E
Sbjct: 301 LTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAE 360
Query: 353 IMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLS 406
++ E PT Y +++ L ++GLL+ A+ ++ E + V + T LS
Sbjct: 361 MLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEK---NDVIWRTFLS 411
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 148/358 (41%), Gaps = 36/358 (10%)
Query: 159 LIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSG 218
L++ K G++D+ + ++ + +++ LC + + A L++++ L G
Sbjct: 257 LVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVG 316
Query: 219 CSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRAL 278
YN IR + G N F L+K P
Sbjct: 317 TVNMDRAYNIWIRALIKAGFLNNPADF----LQKISP----------------------- 349
Query: 279 EVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSL 338
+EGC ++ YNS+V K+ + Y +++ ++ RG+ PN T N +
Sbjct: 350 -------LEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFF 402
Query: 339 SSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDI 398
G+ D ++ +E PT ++YN +++ LC + +++A + + F
Sbjct: 403 CKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGG 462
Query: 399 VTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSE 458
T++TL + LC +G D +L+ + P + I L +G +E A + +E
Sbjct: 463 KTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDAL-MINE 521
Query: 459 MIGK-GIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCK 515
+ K G+ +SL +G + + + A +L+ M +K + YR VI +C+
Sbjct: 522 LFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCE 579
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 97/432 (22%), Positives = 177/432 (40%), Gaps = 30/432 (6%)
Query: 130 TRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMV----MSGGV 185
TR ++ + + AR+ H + + I +I +G K++ +M+ S G
Sbjct: 122 TRYDILCCLKFFDWAARQPGFHHTRATFH------AIFKILRGAKLVTLMIDFLDRSVGF 175
Query: 186 PD----VITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
+ C+ ++ G G A+ +M G D+ Y+ ++ + ++ F+
Sbjct: 176 ESCRHSLRLCDALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDS 235
Query: 242 AVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAME---GCYPDI-ITYN 297
+ DQ+ +T+++L++ C+ A + L + GC + I +
Sbjct: 236 FDVIF-DQISVRGFVCAVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVD 294
Query: 298 SLVS---FTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIM 354
+L S F + +E LV + + R YN I +L G+ + D L+ +
Sbjct: 295 ALCSKRKFQEATKLLDEIKLVGTVNMDRA-------YNIWIRALIKAGFLNNPADFLQKI 347
Query: 355 NETSSPPTRV-TYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGF 413
+ V YN M+ L K LD + + M+ P+ T N L CK GF
Sbjct: 348 SPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGF 407
Query: 414 VDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSS 473
VDE ++L + +P ++YN I L S+E A ++ I +G T S+
Sbjct: 408 VDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFST 467
Query: 474 LAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSR 533
L C + + A EL+ ++D K A +I LC KV+ A+ +L +S
Sbjct: 468 LTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSG 527
Query: 534 CKPDEKIYDALI 545
K++ +LI
Sbjct: 528 VDTSFKMFTSLI 539
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/404 (21%), Positives = 168/404 (41%), Gaps = 41/404 (10%)
Query: 157 TNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSL 216
+++ L+K +D I+ M++ G P+ T N + CK G++ A++L S
Sbjct: 361 NSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSE 420
Query: 217 SGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIR 276
G +P A++YN +I + + +A K + +G T++ L +C
Sbjct: 421 IGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDM 480
Query: 277 ALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSR-GMQPNAVTYNTLI 335
A E++ A P I ++S G E+ L+I+ L ++ G+ + + +LI
Sbjct: 481 ARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDA-LMINELFNKSGVDTSFKMFTSLI 539
Query: 336 HSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLC--KSGLLDRAISLYSTMVSES 393
+ + D ++ M E PTR Y ++ +C +SG E
Sbjct: 540 YGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESG--------------EK 585
Query: 394 CFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAK 453
F + TLL + + +Q YN+ I+G G + A+
Sbjct: 586 NF-----FTTLLK--FQLSLWEHKVQ---------------AYNLFIEGAGFAGKPKLAR 623
Query: 454 ELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGL 513
+Y M GI P ++ + + +++ +A+ ++ ++ K K Y+ +I+GL
Sbjct: 624 LVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQG-KTKKRLYQVMIVGL 682
Query: 514 CKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEA 557
CK K+D A+ L+ M +P + Y+ I+ + + EA
Sbjct: 683 CKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEA 726
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 125/322 (38%), Gaps = 45/322 (13%)
Query: 123 KILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMS 182
KI+ LC G++ A + E+ + F T+LI G I + + D K+I M
Sbjct: 502 KIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEK 561
Query: 183 GGVP------DVITC------------------------------NMVIGGLCKRGYLKS 206
G P +VI C N+ I G G K
Sbjct: 562 GYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKL 621
Query: 207 AVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIE 266
A + + M G +P + +++ +A+ F+ D LR+ Y V+I
Sbjct: 622 ARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHD-LREQGKTKKRLYQVMIV 680
Query: 267 LVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQP 326
+C+ A+ LE+M EG P I Y + + Y+E +++ G +
Sbjct: 681 GLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRRI 740
Query: 327 NAVTYNTLIH-SLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISL 385
A N L+H ++ S G ++ + I E P + ++ GL SG +D + L
Sbjct: 741 TAFIGNVLLHNAMKSKGVYEAWTRMRNI--EDKIPEMKSLGELI--GLF-SGRIDMEVEL 795
Query: 386 YS-TMVSESCFP-DIVTYNTLL 405
V E C+P D+ TYN LL
Sbjct: 796 KRLDEVIEKCYPLDMYTYNMLL 817
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 109/573 (19%), Positives = 229/573 (39%), Gaps = 94/573 (16%)
Query: 14 IHPT--NGL-RGCNRQGSTSGAGSNHSLRKKSSTLPQISSNDCFSTNKSCLAQRRLQCRS 70
+H T NGL R CN + GA + HSL++ + T Q S L+C
Sbjct: 16 LHYTSLNGLKRRCN---NAHGAANFHSLKRATQTQIQKSQTKPL-----------LKC-- 59
Query: 71 FQGSAVIDRVNEVDHEDWGLESFERRESGELVDPGKPVKPPPFVRNDGFTNNKILQNLCT 130
+ D ++W + +G + + K P R + N ++
Sbjct: 60 ----------GDSDIKEWNVAISSYMRTGRCNEALRVFKRMP--RWSSVSYNGMISGYLR 107
Query: 131 RGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVIT 190
G A +L + M + + S +I+G ++ + K ++ IM DV +
Sbjct: 108 NGEFELARKLFDEMPERDLV----SWNVMIKGYVRNRNLGKARELFEIMPER----DVCS 159
Query: 191 CNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQL 250
N ++ G + G + A + + M + +++N ++ EA +K +
Sbjct: 160 WNTMLSGYAQNGCVDDARSVFDRMP----EKNDVSWNALLSAYVQNSKMEEACMLFKSRE 215
Query: 251 RKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQG--- 307
L+++ L+ + + A + + M + D++++N++++ A+ G
Sbjct: 216 NWA----LVSWNCLLGGFVKKKKIVEARQFFDSMNVR----DVVSWNTIITGYAQSGKID 267
Query: 308 -------------VYEETYLV---ISN--------LLSRGMQPNAVTYNTLIHSLSSHGY 343
V+ T +V I N L + + N V++N ++
Sbjct: 268 EARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGER 327
Query: 344 WDGVDDVLEIMNETSSPPTR--VTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTY 401
+ ++ ++M P R T+N M+ G + G + A +L+ M D V++
Sbjct: 328 MEMAKELFDVM------PCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSW 377
Query: 402 NTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIG 461
+++G + G E ++L + +++ A+ A + ++E K+L+ ++
Sbjct: 378 AAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVK 437
Query: 462 KGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDI 521
G ++L +C +EEA +L KEM KD ++ +I G + ++
Sbjct: 438 GGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKD----IVSWNTMIAGYSRHGFGEV 493
Query: 522 AIQALDLMVRSRCKPDEKIYDALIKAVADSGMV 554
A++ + M R KPD+ A++ A + +G+V
Sbjct: 494 ALRFFESMKREGLKPDDATMVAVLSACSHTGLV 526
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 106/231 (45%), Gaps = 26/231 (11%)
Query: 331 YNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMV 390
+N I S G + V + M SS V+YN M++G ++G + A L+ M
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRMPRWSS----VSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 391 SESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSME 450
D+V++N ++ G + + + +L ++ + + ++N + G A+ G ++
Sbjct: 123 ER----DLVSWNVMIKGYVRNRNLGKARELFEIMPERD----VCSWNTMLSGYAQNGCVD 174
Query: 451 SAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVI 510
A+ ++ M K ++++ ++L + ++EEA L K E ++ C++
Sbjct: 175 DARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEACMLFKSR----ENWALVSWNCLL 226
Query: 511 LGLCKQRKVDIAIQALDLM-VRSRCKPDEKIYDALIKAVADSGMVKEANDL 560
G K++K+ A Q D M VR D ++ +I A SG + EA L
Sbjct: 227 GGFVKKKKIVEARQFFDSMNVR-----DVVSWNTIITGYAQSGKIDEARQL 272
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/355 (19%), Positives = 142/355 (40%), Gaps = 27/355 (7%)
Query: 72 QGSAVIDRVNEVDHEDWGLESFERRESGELVDPGKPVKPPPFVRNDGFTNNKILQNLCTR 131
+ D +N D W +SG++ + + P D FT ++
Sbjct: 237 EARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPV--QDVFTWTAMVSGYIQN 294
Query: 132 GRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITC 191
+ A L + M ++++ S ++ G ++ +++ ++ ++M +V T
Sbjct: 295 RMVEEARELFDKMPERNEV----SWNAMLAGYVQGERMEMAKELFDVMP----CRNVSTW 346
Query: 192 NMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLR 251
N +I G + G + A +L + M D +++ +I G G+ EA+ + R
Sbjct: 347 NTMITGYAQCGKISEAKNLFDKMP----KRDPVSWAAMIAGYSQSGHSFEALRLFVQMER 402
Query: 252 KGCPPYLITYTVLIELVCRYCGAIRALEV---LEDMAMEGCYPD-IITYNSLVSFTAKQG 307
+G +++ + C + ALE+ L ++G Y N+L+ K G
Sbjct: 403 EGGRLNRSSFSSALST----CADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCG 458
Query: 308 VYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYN 367
EE ++L + V++NT+I S HG+ + E M P T
Sbjct: 459 SIEEA----NDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMV 514
Query: 368 IMLNGLCKSGLLDRAISLYSTMVSE-SCFPDIVTYNTLLSGLCKEGFVDEGIQLL 421
+L+ +GL+D+ + TM + P+ Y ++ L + G +++ L+
Sbjct: 515 AVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLM 569
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/352 (19%), Positives = 134/352 (38%), Gaps = 37/352 (10%)
Query: 131 RGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVIT 190
R + A+ + + A +S+ P ++I ++ G ++ + G P +T
Sbjct: 682 RQHKLKEAKRLYLAAGESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVT 741
Query: 191 CNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQL 250
++++ L RG + A + D + YNT+I+ M + G A ++
Sbjct: 742 ISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMH 801
Query: 251 RKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYE 310
G P + TY +I + R +A+E+ + G Y D Y +++ K G
Sbjct: 802 TSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMS 861
Query: 311 ETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIML 370
E + S + +G++P +YN ++ ++ VD++L+ M
Sbjct: 862 EALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMER-------------- 907
Query: 371 NGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCS 430
NG C D+ TY TL+ + E + + L+
Sbjct: 908 NGRC---------------------TDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIP 946
Query: 431 PGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGF--CG 480
++ + L + G ME A+ Y +M GI PD ++ G+ CG
Sbjct: 947 LSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCG 998
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/426 (18%), Positives = 179/426 (42%), Gaps = 16/426 (3%)
Query: 147 KSQIPHFPSC---TNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGY 203
K Q+ + PS T ++R ++G+I + M+ G PD + C ++ + G
Sbjct: 179 KLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGR 238
Query: 204 LKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTV 263
+ + + + YN ++ + K + + W + + +G PP TYT+
Sbjct: 239 HSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTL 298
Query: 264 LIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRG 323
++ + AL+ +M G P+ +TY+S++S + K G +E+ + ++ S+G
Sbjct: 299 VVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQG 358
Query: 324 MQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAI 383
+ P+ T T++ + + M P V +++ K GL A
Sbjct: 359 IVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQ 418
Query: 384 SLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGL 443
S++ + D TY + G V + + ++ ++ + Y + +
Sbjct: 419 SMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCY 478
Query: 444 ARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKH 503
A++ +++ A+E + + G+ PD + + + + ++ E+A +K++
Sbjct: 479 AKIQNVDCAEEAFRALSKTGL-PDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDI 537
Query: 504 TAYRCVILGLCKQRKVDIAIQALDLMVR----SRCKPDEKIYDALIKAVADSGMVKEAND 559
Y+ + CK+ + +A DL+V+ +R K + ++ +A+S + +D
Sbjct: 538 ELYKTAMRVYCKE---GMVAEAQDLIVKMGREARVKDNR-----FVQTLAESMHIVNKHD 589
Query: 560 LHQRLI 565
H+ ++
Sbjct: 590 KHEAVL 595
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 132/325 (40%), Gaps = 5/325 (1%)
Query: 164 IKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDA 223
+K G +++ I+N+M + + N VI + G + A + + + G +
Sbjct: 613 LKEGNLNETKAILNLMFKTDLGSSAV--NRVISSFVREGDVSKAEMIADIIIRLGLRMEE 670
Query: 224 ITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIR-ALEVLE 282
T T+I + EA + P + + +I+ R CG + A +
Sbjct: 671 ETIATLIAVYGRQHKLKEAKRLYLAAGESKTPGKSVIRS-MIDAYVR-CGWLEDAYGLFM 728
Query: 283 DMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHG 342
+ A +GC P +T + LV+ +G + E + L + ++ + V YNTLI ++ G
Sbjct: 729 ESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAG 788
Query: 343 YWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYN 402
++ E M+ + P + TYN M++ + LD+AI ++S + D Y
Sbjct: 789 KLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYT 848
Query: 403 TLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGK 462
++ K G + E + L + PG +YN+ + A EL M
Sbjct: 849 NMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERN 908
Query: 463 GIVPDEITHSSLAWGFCGVDQLEEA 487
G D T+ +L + Q EA
Sbjct: 909 GRCTDLSTYLTLIQVYAESSQFAEA 933
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 102/257 (39%), Gaps = 6/257 (2%)
Query: 320 LSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLL 379
L +P+ V Y ++ G ++ M E P V ML + G
Sbjct: 180 LQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRH 239
Query: 380 DRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIA 439
++ Y + YN +LS L K+ F + I L + P TY +
Sbjct: 240 SAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLV 299
Query: 440 IDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDE 499
+ A+ G E A + + EM G VP+E+T+SS+ E+A+ L ++M + +
Sbjct: 300 VSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDM--RSQ 357
Query: 500 KIKHTAYRCVILGLCKQRKVDIAIQALDL---MVRSRCKPDEKIYDALIKAVADSGMVKE 556
I + Y C + L K + +AL L M R++ DE I +I+ G+ +
Sbjct: 358 GIVPSNYTCATM-LSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHD 416
Query: 557 ANDLHQRLIEWKILKTE 573
A + + +L E
Sbjct: 417 AQSMFEETERLNLLADE 433
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 86/405 (21%), Positives = 151/405 (37%), Gaps = 20/405 (4%)
Query: 155 SCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDM 214
+ +I ++ G + K I +I++ G + T +I ++ LK A L
Sbjct: 637 AVNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRL---- 692
Query: 215 SLSGCSPDAITYNTIIRGMFDK----GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCR 270
++IR M D G +A + + KGC P +T ++L+ +
Sbjct: 693 -YLAAGESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTN 751
Query: 271 YCGAIRALEVLEDMAMEGCYP-DIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAV 329
G R E + +E D + YN+L+ + G + + + + G+ +
Sbjct: 752 R-GKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQ 810
Query: 330 TYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRV---TYNIMLNGLCKSGLLDRAISLY 386
TYNT+I S +G +D +EI + + Y M+ K G + A+SL+
Sbjct: 811 TYNTMI---SVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLF 867
Query: 387 STMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARM 446
S M + P +YN ++ E +LL + L TY I A
Sbjct: 868 SEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAES 927
Query: 447 GSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAY 506
A++ + + KGI SSL +EEA +M +
Sbjct: 928 SQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACK 987
Query: 507 RCVILGLCKQRKVDIAIQALDLMVRSRCKPDE---KIYDALIKAV 548
R ++ G + I + M+RS + D + + L KAV
Sbjct: 988 RTILKGYMTCGDAEKGILFYEKMIRSSVEDDRFVSSVVEDLYKAV 1032
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/420 (21%), Positives = 180/420 (42%), Gaps = 28/420 (6%)
Query: 155 SCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDM 214
+ +L+ + G ++G I + + G ++ N +I + G L+ + + M
Sbjct: 249 TVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRM 308
Query: 215 SLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGA 274
+ D I++N+II+ A+S +++ P +T L ++ + G
Sbjct: 309 YVR----DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQ-LGD 363
Query: 275 IRALEVLEDMAMEGCY--PDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNA--VT 330
IRA ++ + + DI N++V AK G+ + V + L PN ++
Sbjct: 364 IRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWL------PNTDVIS 417
Query: 331 YNTLIHSLSSHGYWDGVDDVLEIMNETSS-PPTRVTYNIMLNGLCKSGLLDRAISLYSTM 389
+NT+I + +G+ ++ IM E + T+ +L ++G L + + L+ +
Sbjct: 418 WNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRL 477
Query: 390 VSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSM 449
+ + D+ +L K G +++ + L Y + N P +N I G
Sbjct: 478 LKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVP----WNTLIACHGFHGHG 533
Query: 450 ESAKELYSEMIGKGIVPDEITHSSL--AWGFCG-VDQLEEAMELLKEMHKKDEKIKHTAY 506
E A L+ EM+ +G+ PD IT +L A G VD+ + E+++ + +KH Y
Sbjct: 534 EKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKH--Y 591
Query: 507 RCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
C++ + +++ A++ + M +PD I+ AL+ A G V + L E
Sbjct: 592 GCMVDMYGRAGQLETALKFIKSM---SLQPDASIWGALLSACRVHGNVDLGKIASEHLFE 648
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 147/372 (39%), Gaps = 60/372 (16%)
Query: 97 ESGELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSC 156
E G L D K V +VR D + N I++ + + A L + M R S+I P C
Sbjct: 294 EFGRLRDCQK-VFDRMYVR-DLISWNSIIKAYELNEQPLRAISLFQEM-RLSRIQ--PDC 348
Query: 157 TNLIRG---LIKIGQIDKGCKIINIMVMSGG--VPDVITCNMVIGGLCKRGYLKSAVDLV 211
LI L ++G I + C+ + + G + D+ N V+ K G + SA +
Sbjct: 349 LTLISLASILSQLGDI-RACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVF 407
Query: 212 EDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRY 271
+ + D I++NTII G G +EA+ + +G V + C
Sbjct: 408 NWLP----NTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQ 463
Query: 272 CGAIR-ALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVT 330
GA+R +++ + G Y D+ SL K G E+ +L + + N+V
Sbjct: 464 AGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDAL----SLFYQIPRVNSVP 519
Query: 331 YNTLI--HSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYST 388
+NTLI H HG ++A+ L+
Sbjct: 520 WNTLIACHGFHGHG-------------------------------------EKAVMLFKE 542
Query: 389 MVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLL-TGTNCSPGLVTYNIAIDGLARMG 447
M+ E PD +T+ TLLS G VDEG ++ T +P L Y +D R G
Sbjct: 543 MLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAG 602
Query: 448 SMESAKELYSEM 459
+E+A + M
Sbjct: 603 QLETALKFIKSM 614
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 171/421 (40%), Gaps = 74/421 (17%)
Query: 156 CTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMS 215
CT LI K+G + ++ + M DV N +I G +RG +K+A++L + M
Sbjct: 120 CTTLITAYAKLGALCCARRVFDEMSKR----DVPVWNAMITGYQRRGDMKAAMELFDSMP 175
Query: 216 LSGCSPDAITYNTIIRGMFDKGNFNEAVSFW----KDQLRKGCPPYLITYTVLIELVCRY 271
+ ++ T+I G GN++EA+ + KD+ K P ++ +VL C
Sbjct: 176 ----RKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVK--PNHITVVSVLP--ACAN 227
Query: 272 CGAIRALEVLEDMAME-GCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVT 330
G + LE A E G + +I N+ + +K G+ + + L G Q N +
Sbjct: 228 LGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEEL---GNQRNLCS 284
Query: 331 YNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMV 390
+N++I SL++H G D A++L++ M+
Sbjct: 285 WNSMIGSLATH-----------------------------------GKHDEALTLFAQML 309
Query: 391 SESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTN-CSPGLVTYNIAIDGLARMGSM 449
E PD VT+ LL G V +G +L + + SP L Y ID L R+G +
Sbjct: 310 REGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKL 369
Query: 450 ESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCV 509
+ A +L M K PD + +L G C E E+ E K E CV
Sbjct: 370 QEAYDLIKTMPMK---PDAVVWGTLL-GACSFHGNVEIAEIASEALFKLEPT--NPGNCV 423
Query: 510 ILG--LCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEW 567
I+ K D ++ LM + + + KA S V+ D+H+ +E
Sbjct: 424 IMSNIYAANEKWDGVLRMRKLMKK----------ETMTKAAGYSYFVEVGVDVHKFTVED 473
Query: 568 K 568
K
Sbjct: 474 K 474
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 106/226 (46%), Gaps = 2/226 (0%)
Query: 186 PDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSF 245
PDV T N+++ G + G + + +M G P+++TY I G K NF EA+
Sbjct: 208 PDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRL 267
Query: 246 WKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAK 305
++D R + T LI I+A ++ ++++ G PD YN+L+S K
Sbjct: 268 FEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMK 327
Query: 306 QGVYEETYLVISNLLSRGMQPNAVTYNTLIHSL--SSHGYWDGVDDVLEIMNETSSPPTR 363
G V+ + +G++P++VT++++ + S ++GV + + M E S P
Sbjct: 328 CGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKT 387
Query: 364 VTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLC 409
T +++ C +G ++ + L+ M+ + P L + LC
Sbjct: 388 PTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALC 433
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 102/247 (41%), Gaps = 10/247 (4%)
Query: 192 NMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLR 251
N+++ C +K A + E + S +PD T N ++ G + G+ F+ + ++
Sbjct: 180 NILLRAFCTEREMKEARSIFEKLH-SRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVK 238
Query: 252 KGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYE- 310
+G P +TY + I+ C+ AL + EDM IT L + GV
Sbjct: 239 RGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDF---DITVQILTTLIHGSGVARN 295
Query: 311 --ETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNI 368
+ + + RG+ P+ YN L+ SL G G V++ M E P VT++
Sbjct: 296 KIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHS 355
Query: 369 MLNGLCKSGL--LDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLL-YLLT 425
M G+ KS + Y M S P T L+ C G V+ G+ L Y+L
Sbjct: 356 MFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLE 415
Query: 426 GTNCSPG 432
C G
Sbjct: 416 KGYCPHG 422
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 104/243 (42%), Gaps = 8/243 (3%)
Query: 331 YNTLIHSLSSHGYWDGVDDVL-EIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTM 389
+ +H L+ Y+D ++ E+ + + + + +I+L + K G + + + M
Sbjct: 106 FEKTLHILARMRYFDQAWALMAEVRKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKM 165
Query: 390 VSESCFPD--IVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMG 447
E + +N LL C E + E + L + +P + T NI + G G
Sbjct: 166 EKEIFRKKFGVDEFNILLRAFCTEREMKEARSIFEKLH-SRFNPDVKTMNILLLGFKEAG 224
Query: 448 SMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYR 507
+ + + Y EM+ +G P+ +T+ GFC EA+ L ++M + D I
Sbjct: 225 DVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILT 284
Query: 508 CVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVAD----SGMVKEANDLHQR 563
+I G R A Q D + + PD Y+AL+ ++ SG +K ++ ++
Sbjct: 285 TLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEK 344
Query: 564 LIE 566
IE
Sbjct: 345 GIE 347
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 116/284 (40%), Gaps = 8/284 (2%)
Query: 290 YPDIITYNS---LVSFTAKQGVYEETYLVISNLLSRGMQPN--AVTYNTLIHSLSSHGYW 344
YP+++++ S L+ AK G YEET + + +N L+ + +
Sbjct: 133 YPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTEREM 192
Query: 345 DGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTL 404
+ E ++ +P + T NI+L G ++G + Y MV P+ VTY
Sbjct: 193 KEARSIFEKLHSRFNPDVK-TMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIR 251
Query: 405 LSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGI 464
+ G CK+ E ++L + + + I G + A++L+ E+ +G+
Sbjct: 252 IDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGL 311
Query: 465 VPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDI--A 522
PD +++L + A++++KEM +K + + + +G+ K ++
Sbjct: 312 TPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGV 371
Query: 523 IQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
+ M P L+K +G V DL + ++E
Sbjct: 372 CEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLE 415
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 104/257 (40%), Gaps = 4/257 (1%)
Query: 291 PDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDV 350
PD+ T N L+ + G T L ++ RG +PN+VTY I + +
Sbjct: 208 PDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRL 267
Query: 351 LEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCK 410
E M+ T +++G + +A L+ + PD YN L+S L K
Sbjct: 268 FEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMK 327
Query: 411 EGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGL--ARMGSMESAKELYSEMIGKGIVPDE 468
G V I+++ + P VT++ G+ ++ E Y +M + +VP
Sbjct: 328 CGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKT 387
Query: 469 ITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQ-ALD 527
T L FC ++ ++L K M +K A + LC +R+ + A + +
Sbjct: 388 PTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFECSWQ 447
Query: 528 LMVRSRCKPDEKIYDAL 544
+ R RC E +Y L
Sbjct: 448 TVERGRC-VSEPVYRML 463
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 186/424 (43%), Gaps = 30/424 (7%)
Query: 151 PHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDL 210
P + ++++R + + I N M+ +G V + N++I K G + +A D+
Sbjct: 305 PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDV 364
Query: 211 VEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCR 270
M D +++N+II G G+ EA+ +K + ITY +LI + R
Sbjct: 365 FNSME----CKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTR 420
Query: 271 YCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVT 330
+ + G D+ N+L+ AK G ++ + S++ + + VT
Sbjct: 421 LADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGT----GDTVT 476
Query: 331 YNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDR-AISLYSTM 389
+NT+I + G + V M ++ P T+ + L +C S R ++ +
Sbjct: 477 WNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLP-MCASLAAKRLGKEIHCCL 535
Query: 390 VSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSM 449
+ ++ N L+ K G ++ ++ ++ + +VT+ I G
Sbjct: 536 LRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRD----VVTWTGMIYAYGMYGEG 591
Query: 450 ESAKELYSEMIGKGIVPDEITHSSLAWGFCG----VDQLEEAMELLKEMHKKDEKIKHTA 505
E A E +++M GIVPD + ++ + C VD+ E +K +K D I+H
Sbjct: 592 EKALETFADMEKSGIVPDSVVFIAIIYA-CSHSGLVDEGLACFEKMKTHYKIDPMIEH-- 648
Query: 506 YRCVILGLCKQRKVDIA---IQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQ 562
Y CV+ L + +K+ A IQA+ + KPD I+ ++++A SG ++ A + +
Sbjct: 649 YACVVDLLSRSQKISKAEEFIQAMPI------KPDASIWASVLRACRTSGDMETAERVSR 702
Query: 563 RLIE 566
R+IE
Sbjct: 703 RIIE 706
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 157/363 (43%), Gaps = 56/363 (15%)
Query: 187 DVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIR---GMFDKGNFNEAV 243
+V N +I K G A++ + S SPD T+ ++I+ G+FD + V
Sbjct: 70 NVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFD-AEMGDLV 128
Query: 244 SFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFT 303
++ L G L L+++ R RA +V ++M + D++++NSL+S
Sbjct: 129 --YEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR----DLVSWNSLISGY 182
Query: 304 AKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSS----------HGY---------- 343
+ G YEE + L + + P++ T ++++ + + HG+
Sbjct: 183 SSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVV 242
Query: 344 ------------WDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVS 391
+ D + +E + V+YN M+ G K +++ ++ ++ +
Sbjct: 243 VVNNGLVAMYLKFRRPTDARRVFDEMDVRDS-VSYNTMICGYLKLEMVEESVRMFLENLD 301
Query: 392 ESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLV----TYNIAIDGLARMG 447
+ PD++T +++L G + + + L + G V NI ID A+ G
Sbjct: 302 QFK-PDLLTVSSVLRAC---GHLRD-LSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCG 356
Query: 448 SMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYR 507
M +A+++++ M K D ++ +S+ G+ L EAM+L K M +E+ H Y
Sbjct: 357 DMITARDVFNSMECK----DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYL 412
Query: 508 CVI 510
+I
Sbjct: 413 MLI 415
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/378 (17%), Positives = 156/378 (41%), Gaps = 15/378 (3%)
Query: 185 VPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVS 244
V D+++ N +I G GY + A+++ ++ S PD+ T ++++ + +
Sbjct: 169 VRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQG 228
Query: 245 FWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLV-SFT 303
L+ G ++ L+ + ++ A V ++M + D ++YN+++ +
Sbjct: 229 LHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVR----DSVSYNTMICGYL 284
Query: 304 AKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTR 363
+ V E + + NL +P+ +T ++++ + + M +
Sbjct: 285 KLEMVEESVRMFLENL--DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLES 342
Query: 364 VTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYL 423
NI+++ K G + A ++++M C D V++N+++SG + G + E ++L +
Sbjct: 343 TVRNILIDVYAKCGDMITARDVFNSM---EC-KDTVSWNSIISGYIQSGDLMEAMKLFKM 398
Query: 424 LTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQ 483
+ +TY + I R+ ++ K L+S I GI D ++L + +
Sbjct: 399 MMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGE 458
Query: 484 LEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDA 543
+ +++++ M D + VI + +Q M +S PD +
Sbjct: 459 VGDSLKIFSSMGTGDT----VTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLV 514
Query: 544 LIKAVADSGMVKEANDLH 561
+ A + ++H
Sbjct: 515 TLPMCASLAAKRLGKEIH 532
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 109/481 (22%), Positives = 201/481 (41%), Gaps = 89/481 (18%)
Query: 157 TNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSL 216
T + +K +D K+ M D T N ++ G C+ G+ A L +M L
Sbjct: 91 TATVDMFVKCNSVDYAAKVFERMPER----DATTWNAMLSGFCQSGHTDKAFSLFREMRL 146
Query: 217 SGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRY--CGA 274
+ +PD++T T+I+ + + + +R G + TV + Y CG
Sbjct: 147 NEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVD---VQVTVANTWISTYGKCGD 203
Query: 275 IRALEVLEDMAMEGCYPDIITYNSLV--------SFTAKQGVY-----EETYLVIS---N 318
+ + +++ + A++ ++++NS+ +F A G+Y EE +S N
Sbjct: 204 LDSAKLVFE-AIDRGDRTVVSWNSMFKAYSVFGEAFDA-FGLYCLMLREEFKPDLSTFIN 261
Query: 319 LLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMN-------------------ETSS 359
L + P +T LIHS + H G D +E +N + +
Sbjct: 262 LAASCQNPETLTQGRLIHSHAIHL---GTDQDIEAINTFISMYSKSEDTCSARLLFDIMT 318
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQ 419
T V++ +M++G + G +D A++L+ M+ PD+VT +L+SG K G ++ G
Sbjct: 319 SRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKW 378
Query: 420 L----------------------LYLLTGT--------NCSP--GLVTYNIAIDGLARMG 447
+ +Y G+ + +P +VT+ I G A G
Sbjct: 379 IDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNG 438
Query: 448 SMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAME---LLKEMHKKDEKIKHT 504
A +L+S+MI P+ IT ++ LE+ E ++K+++ + H
Sbjct: 439 IFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDH- 497
Query: 505 AYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
Y C++ L ++ K++ +AL+L+ KPD I+ AL+ A VK A + L
Sbjct: 498 -YSCMVDLLGRKGKLE---EALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESL 553
Query: 565 I 565
Sbjct: 554 F 554
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 132/324 (40%), Gaps = 56/324 (17%)
Query: 136 AAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVI 195
+A L +IM ++ + S T +I G + G +D+ + + M+ SG PD++T +I
Sbjct: 309 SARLLFDIMTSRTCV----SWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLI 364
Query: 196 GGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCP 255
G K G L++ + + GC D + + M+ K
Sbjct: 365 SGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSK------------------- 405
Query: 256 PYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLV 315
CG+I + D E ++T+ ++++ A G++ E +
Sbjct: 406 ----------------CGSIHEARDIFDNTPE---KTVVTWTTMIAGYALNGIFLEALKL 446
Query: 316 ISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS-PPTRVTYNIMLNGLC 374
S ++ +PN +T+ ++ + + G + + IM + + P Y+ M++ L
Sbjct: 447 FSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLG 506
Query: 375 KSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCK----EGFVDEGIQLLYLLTGTNCS 430
+ G L+ A+ L M ++ PD + LL+ CK ++ + L+ L +
Sbjct: 507 RKGKLEEALELIRNMSAK---PDAGIWGALLNA-CKIHRNVKIAEQAAESLFNLEPQMAA 562
Query: 431 PGLVTYNIAI-----DGLARMGSM 449
P + NI DG AR+ S+
Sbjct: 563 PYVEMANIYAAAGMWDGFARIRSI 586
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 103/215 (47%), Gaps = 2/215 (0%)
Query: 291 PDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDV 350
PD++ YN++++ ++ +E + V+ L RG +P+ VTY ++ + + ++ V +
Sbjct: 591 PDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEF 650
Query: 351 LEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCK 410
M + SS P + Y +++N L K G D A+ M S Y L LC
Sbjct: 651 FRKM-QKSSIPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCS 709
Query: 411 EGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEIT 470
G +EG+ +L + P +VTY I G++++A ++ +M K P+ +T
Sbjct: 710 AGRCNEGLNMLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQM-KKVCSPNLVT 768
Query: 471 HSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTA 505
+ + + EEA EL ++M + IK+++
Sbjct: 769 CNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSS 803
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 93/232 (40%), Gaps = 14/232 (6%)
Query: 186 PDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSF 245
PDV+ N V+ +R + A +++ + G P +TY I+ M +N F
Sbjct: 591 PDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEF 650
Query: 246 WKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAK 305
++ +++K P + Y VL+ + + + A+ +EDM G Y L
Sbjct: 651 FR-KMQKSSIPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCS 709
Query: 306 QGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVT 365
G E ++ + +P VTY LI + G + + M + SP VT
Sbjct: 710 AGRCNEGLNMLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKKVCSPNL-VT 768
Query: 366 YNIMLNGLCKSGLLDRAISLYSTMVSE------------SCFPDIVTYNTLL 405
NIML + GL + A L+ M + PD T+NT+L
Sbjct: 769 CNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTML 820
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 109/266 (40%), Gaps = 32/266 (12%)
Query: 104 PGKPVKPP------PFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCT 157
P K KP P + D N +L R + A +++ + ++ Q P +
Sbjct: 573 PKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKP-----S 627
Query: 158 NLIRGLIKIGQIDKGCKIINIM------VMSGGVPDVITCNMVIGGLCKRGYLKSAVDLV 211
+ GLI ++ C+ N++ + +P+ + +++ L K G AV V
Sbjct: 628 PVTYGLIM--EVMLACEKYNLVHEFFRKMQKSSIPNALAYRVLVNTLWKEGKSDEAVHTV 685
Query: 212 EDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRY 271
EDM G A Y + R + G NE ++ K R P ++TYT LI+ C
Sbjct: 686 EDMESRGIVGSAALYYDLARCLCSAGRCNEGLNMLKKICRVANKPLVVTYTGLIQ-ACVD 744
Query: 272 CGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQ------ 325
G I+ + D + C P+++T N ++ + G++EE + + G
Sbjct: 745 SGNIKNAAYIFDQMKKVCSPNLVTCNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSSD 804
Query: 326 ------PNAVTYNTLIHSLSSHGYWD 345
P+ T+NT++ + + WD
Sbjct: 805 FESRVLPDTYTFNTMLDTCAEQEKWD 830
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/349 (18%), Positives = 130/349 (37%), Gaps = 56/349 (16%)
Query: 237 GNFN---EAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAME-GCYPD 292
GN+ + + + + Q R I YT + ++ + + AL V M ++ YPD
Sbjct: 483 GNWRRVLQVIEWLQRQDRYKSNKIRIIYTTALNVLGKSRRPVEALNVFHAMLLQISSYPD 542
Query: 293 IITYNSLVSFTAKQGVYEETYLVISNLLSR---------------GMQPNAVTYNTLIHS 337
++ Y S+ + G +E + VI + S ++P+ V YN ++++
Sbjct: 543 MVAYRSIAVTLGQAGHIKELFYVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNA 602
Query: 338 LSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPD 397
W+G VL+ + + P+ VTY +++ + + + M S
Sbjct: 603 CVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKMQKSSI--- 659
Query: 398 IVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYS 457
P + Y + ++ L + G + A
Sbjct: 660 ---------------------------------PNALAYRVLVNTLWKEGKSDEAVHTVE 686
Query: 458 EMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQR 517
+M +GIV + LA C + E + +LK++ + K Y +I
Sbjct: 687 DMESRGIVGSAALYYDLARCLCSAGRCNEGLNMLKKICRVANKPLVVTYTGLIQACVDSG 746
Query: 518 KVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
+ A D M + C P+ + ++KA G+ +EA +L Q++ E
Sbjct: 747 NIKNAAYIFDQMKKV-CSPNLVTCNIMLKAYLQGGLFEEARELFQKMSE 794
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 99/230 (43%), Gaps = 14/230 (6%)
Query: 146 RKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLK 205
+KS IP+ + L+ L K G+ D+ + M G V + LC G
Sbjct: 655 QKSSIPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCN 714
Query: 206 SAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLI 265
+++++ + P +TY +I+ D GN A + DQ++K C P L+T +++
Sbjct: 715 EGLNMLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIF-DQMKKVCSPNLVTCNIML 773
Query: 266 ELVCRYCGAIRALEVLEDMAMEGCY------------PDIITYNSLVSFTAKQGVYEETY 313
+ + A E+ + M+ +G + PD T+N+++ A+Q +++
Sbjct: 774 KAYLQGGLFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQEKWDDFG 833
Query: 314 LVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS-PPT 362
+L G NA + ++ S G + ++ E M ++ PP+
Sbjct: 834 YAYREMLRHGYHFNAKRHLRMVLEASRAGKEEVMEATWEHMRRSNRIPPS 883
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 137/331 (41%), Gaps = 41/331 (12%)
Query: 276 RALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLI 335
+AL M G PD+ T+ LV ++ + + S GM N ++LI
Sbjct: 121 QALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLI 180
Query: 336 HSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCF 395
+ +G D + + + + V +N+MLNG K G LD I +S M +
Sbjct: 181 KAYLEYGKIDVPSKLFDRVLQKDC----VIWNVMLNGYAKCGALDSVIKGFSVMRMDQIS 236
Query: 396 PDIVTYNTLLSGLCKEGFVDEGIQL--LYLLTGTNCSPGL-------------------- 433
P+ VT++ +LS + +D G+QL L +++G + +
Sbjct: 237 PNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKL 296
Query: 434 ---------VTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQL 484
VT+N I G + G ME + + EMI G++PD IT SSL + L
Sbjct: 297 FRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENL 356
Query: 485 EEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKP-DEKIYDA 543
E ++ + + + +I K R V +A + S+C D ++ A
Sbjct: 357 EYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQN-----IFSQCNSVDVVVFTA 411
Query: 544 LIKAVADSGMVKEANDLHQRLIEWKILKTEI 574
+I +G+ ++ ++ + L++ KI EI
Sbjct: 412 MISGYLHNGLYIDSLEMFRWLVKVKISPNEI 442
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 154/351 (43%), Gaps = 30/351 (8%)
Query: 157 TNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSL 216
++LI+ ++ G+ID K+ + ++ D + N+++ G K G L S + M +
Sbjct: 177 SSLIKAYLEYGKIDVPSKLFDRVLQK----DCVIWNVMLNGYAKCGALDSVIKGFSVMRM 232
Query: 217 SGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIR 276
SP+A+T++ ++ K + V + G L+ + + CG
Sbjct: 233 DQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSK-CGRFD 291
Query: 277 ALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIH 336
L M D +T+N ++S + G+ EE+ ++S G+ P+A+T+++L+
Sbjct: 292 DASKLFRMMSRA---DTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLP 348
Query: 337 SLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLD-----RAISLYSTMVS 391
S+S + LE + R ++I L+ S L+D R +S+ + S
Sbjct: 349 SVSKF-------ENLEYCKQIHCYIMR--HSISLDIFLTSALIDAYFKCRGVSMAQNIFS 399
Query: 392 ESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMES 451
+ D+V + ++SG G + +++ L SP +T + + + +++
Sbjct: 400 QCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKL 459
Query: 452 AKELYSEMIGKGIVPDEITHSSLA----WGFCGVDQLEEAMELLKEMHKKD 498
+EL+ +I KG D + A + CG ++ A E+ + + K+D
Sbjct: 460 GRELHGFIIKKGF--DNRCNIGCAVIDMYAKCG--RMNLAYEIFERLSKRD 506
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/352 (19%), Positives = 154/352 (43%), Gaps = 24/352 (6%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLI-EIMARKSQIPHFPSCTNLIRGLIKIGQIDKG 172
+ D +T+ +IL G ++ + R+S I + S +I ++ G +++
Sbjct: 66 ISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNS---IISSFVRNGLLNQA 122
Query: 173 CKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRG 232
M+ G PDV T ++ K L + +S G + +++I+
Sbjct: 123 LAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKA 182
Query: 233 MFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRA-LEVLEDMAMEGCYP 291
+ G + + L+K C + + V++ + CGA+ + ++ M M+ P
Sbjct: 183 YLEYGKIDVPSKLFDRVLQKDC----VIWNVMLNGYAK-CGALDSVIKGFSVMRMDQISP 237
Query: 292 DIITYNSLVSFTAKQ-----GVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDG 346
+ +T++ ++S A + GV +V+S G+ N+L+ S G +D
Sbjct: 238 NAVTFDCVLSVCASKLLIDLGVQLHGLVVVS-----GVDFEGSIKNSLLSMYSKCGRFDD 292
Query: 347 VDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLS 406
+ +M+ + VT+N M++G +SGL++ +++ + M+S PD +T+++LL
Sbjct: 293 ASKLFRMMSRADT----VTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLP 348
Query: 407 GLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSE 458
+ K ++ Q+ + + S + + ID + + A+ ++S+
Sbjct: 349 SVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQ 400
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/266 (17%), Positives = 116/266 (43%), Gaps = 8/266 (3%)
Query: 296 YNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMN 355
+NS++S + G+ + +L G+ P+ T+ L+ + + + G+D + + ++
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVS 165
Query: 356 ETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVD 415
+ ++ + G +D L+ ++ + C V +N +L+G K G +D
Sbjct: 166 SLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDC----VIWNVMLNGYAKCGALD 221
Query: 416 EGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLA 475
I+ ++ SP VT++ + A ++ +L+ ++ G+ + +SL
Sbjct: 222 SVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLL 281
Query: 476 WGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCK 535
+ + ++A +L + M + D + C+I G + ++ ++ M+ S
Sbjct: 282 SMYSKCGRFDDASKLFRMMSRADT----VTWNCMISGYVQSGLMEESLTFFYEMISSGVL 337
Query: 536 PDEKIYDALIKAVADSGMVKEANDLH 561
PD + +L+ +V+ ++ +H
Sbjct: 338 PDAITFSSLLPSVSKFENLEYCKQIH 363
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 87/472 (18%), Positives = 186/472 (39%), Gaps = 58/472 (12%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGC 173
V +G N +L GR A++L +M+R + + +I G ++ G +++
Sbjct: 270 VDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTV----TWNCMISGYVQSGLMEESL 325
Query: 174 KIINIMVMSGGVPDVITCNMVIGGL--------CKR----------------------GY 203
M+ SG +PD IT + ++ + CK+ Y
Sbjct: 326 TFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAY 385
Query: 204 LK-SAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYT 262
K V + +++ S D + + +I G G + +++ ++ ++ P IT
Sbjct: 386 FKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLV 445
Query: 263 VLIELVCRYCGAIRALEV---LEDMAMEGCYPDIITYN-SLVSFTAKQGVYEETYLVISN 318
++ ++ G + AL++ L ++ + + +++ AK G Y +
Sbjct: 446 SILPVI----GILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFER 501
Query: 319 LLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGL 378
L R + V++N++I + D+ M + V+ + L+
Sbjct: 502 LSKR----DIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPS 557
Query: 379 LDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNI 438
+++ M+ S D+ + +TL+ K G + + + + N +V++N
Sbjct: 558 ESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKN----IVSWNS 613
Query: 439 AIDGLARMGSMESAKELYSEMIGK-GIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKK 497
I G ++ + L+ EM+ K GI PD+IT + C V ++E + + M +
Sbjct: 614 IIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSM-TE 672
Query: 498 DEKI--KHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKA 547
D I + Y CV+ + ++ A + + M PD ++ L+ A
Sbjct: 673 DYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSM---PFPPDAGVWGTLLGA 721
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 133/344 (38%), Gaps = 52/344 (15%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D F N ++ G + A + +M K + S +LI GL++ QI + ++
Sbjct: 309 DLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSV----SWNSLITGLVQRKQISEAYELF 364
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
M D+++ +I G +G + V+L M D IT+ +I
Sbjct: 365 EKM----PGKDMVSWTDMIKGFSGKGEISKCVELFGMMP----EKDNITWTAMISAFVSN 416
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITY 296
G + EA+ ++ L+K P T++ ++ I L++ + D+
Sbjct: 417 GYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQ 476
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNE 356
NSLVS K G + Y + S +
Sbjct: 477 NSLVSMYCKCGNTNDAYKIFSCI------------------------------------- 499
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDE 416
S P V+YN M++G +G +A+ L+S + S P+ VT+ LLS G+VD
Sbjct: 500 --SEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDL 557
Query: 417 GIQLLYLLTGT-NCSPGLVTYNIAIDGLARMGSMESAKELYSEM 459
G + + + N PG Y +D L R G ++ A L S M
Sbjct: 558 GWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTM 601
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/417 (18%), Positives = 168/417 (40%), Gaps = 38/417 (9%)
Query: 159 LIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSG 218
L+ G ++ G+ ++ ++ M V +V++C+ ++ G CK G + A L + M+
Sbjct: 183 LLSGYLRAGKWNEAVRVFQGM----AVKEVVSCSSMVHGYCKMGRIVDARSLFDRMT--- 235
Query: 219 CSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRAL 278
+ IT+ +I G F G F + + ++G ++ CR +R
Sbjct: 236 -ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACR--DFVRYR 292
Query: 279 EVLEDMAMEGCYP---DIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLI 335
E + + P D+ NSL+S +K G E V + ++ ++V++N+LI
Sbjct: 293 EGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNK----DSVSWNSLI 348
Query: 336 HSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCF 395
L + + E+ E V++ M+ G G + + + L+ M +
Sbjct: 349 TGLVQR---KQISEAYELF-EKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEK--- 401
Query: 396 PDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKEL 455
D +T+ ++S G+ +E + + + P T++ + A + + ++
Sbjct: 402 -DNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQI 460
Query: 456 YSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCK 515
+ ++ IV D +SL +C +A ++ + + + +Y +I G
Sbjct: 461 HGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPN----IVSYNTMISGYSY 516
Query: 516 QRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIEWKILKT 572
A++ ++ S +P+ + AL+ A G V + WK K+
Sbjct: 517 NGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVD---------LGWKYFKS 564
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 103/505 (20%), Positives = 198/505 (39%), Gaps = 61/505 (12%)
Query: 95 RRESGELVDPGKPVKPPPFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFP 154
R + E + PVK D +N +L G+ A R+ + MA K +
Sbjct: 159 RFDEAEFLYAETPVK-----FRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVV---- 209
Query: 155 SCTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDM 214
SC++++ G K+G+I + + M +VIT +I G K G+ + L M
Sbjct: 210 SCSSMVHGYCKMGRIVDARSLFDRMTER----NVITWTAMIDGYFKAGFFEDGFGLFLRM 265
Query: 215 SLSG-CSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCR--Y 271
G ++ T + + D + E R L L+ + + Y
Sbjct: 266 RQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGY 325
Query: 272 CGAIRA-LEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSR-------- 322
G +A V+++ D +++NSL++ ++ E Y + + +
Sbjct: 326 MGEAKAVFGVMKN-------KDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDM 378
Query: 323 -----------------GMQP--NAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTR 363
GM P + +T+ +I + S+GY++ M + P
Sbjct: 379 IKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNS 438
Query: 364 VTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYL 423
T++ +L+ L + ++ +V + D+ N+L+S CK G ++ ++
Sbjct: 439 YTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSC 498
Query: 424 LTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQ 483
++ P +V+YN I G + G + A +L+S + G P+ +T +L V
Sbjct: 499 IS----EPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGY 554
Query: 484 LEEAMELLKEMHKKDEKIK--HTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIY 541
++ + K M K I+ Y C++ L + +D A +L+ CKP ++
Sbjct: 555 VDLGWKYFKSM-KSSYNIEPGPDHYACMVDLLGRSGLLD---DASNLISTMPCKPHSGVW 610
Query: 542 DALIKAVADSGMVKEANDLHQRLIE 566
+L+ A V A ++LIE
Sbjct: 611 GSLLSASKTHLRVDLAELAAKKLIE 635
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/455 (20%), Positives = 187/455 (41%), Gaps = 38/455 (8%)
Query: 119 FTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINI 178
F N + G L A + M+ +S + S +I + G++ K ++ +
Sbjct: 51 FQCNSQISKHARNGNLQEAEAIFRQMSNRSIV----SWIAMISAYAENGKMSKAWQVFDE 106
Query: 179 MVMSGGVPDVITCNMVIGGLCK-RGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKG 237
M V + N +I + K + L A +L D+ +A++Y T+I G G
Sbjct: 107 M----PVRVTTSYNAMITAMIKNKCDLGKAYELFCDIP----EKNAVSYATMITGFVRAG 158
Query: 238 NFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYN 297
F+EA + + K + VL+ R A+ V + MA++ ++++ +
Sbjct: 159 RFDEAEFLYAETPVKFRDS--VASNVLLSGYLRAGKWNEAVRVFQGMAVK----EVVSCS 212
Query: 298 SLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYW-DGVDDVLEIMNE 356
S+V K G + +L R + N +T+ +I G++ DG L + E
Sbjct: 213 SMVHGYCKMGRIVDA----RSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQE 268
Query: 357 TSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFP-DIVTYNTLLSGLCKEGFVD 415
T +M C+ + R S +VS D+ N+L+S K G++
Sbjct: 269 GDVKVNSNTLAVMFKA-CRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMG 327
Query: 416 EGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLA 475
E + ++ + V++N I GL + + A EL+ +M GK D ++ + +
Sbjct: 328 EAKAVFGVMKNKDS----VSWNSLITGLVQRKQISEAYELFEKMPGK----DMVSWTDMI 379
Query: 476 WGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCK 535
GF G ++ + +EL M +KD + + +I + A+ M++
Sbjct: 380 KGFSGKGEISKCVELFGMMPEKD----NITWTAMISAFVSNGYYEEALCWFHKMLQKEVC 435
Query: 536 PDEKIYDALIKAVADSGMVKEANDLHQRLIEWKIL 570
P+ + +++ A A + E +H R+++ I+
Sbjct: 436 PNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIV 470
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 139/340 (40%), Gaps = 22/340 (6%)
Query: 122 NKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVM 181
N +L G L A R+ + + K + S +I K G + C + + M +
Sbjct: 174 NSLLHGYLESGELDEARRVFDKIPEKDAV----SWNLIISSYAKKGDMGNACSLFSAMPL 229
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
+ N++IGG +K A + M + +++ T+I G G+
Sbjct: 230 KSPA----SWNILIGGYVNCREMKLARTYFDAMP----QKNGVSWITMISGYTKLGDVQS 281
Query: 242 AVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCY--PDIITYNSL 299
A ++ +K + Y +I + AL++ M Y PD IT +S+
Sbjct: 282 AEELFRLMSKKD----KLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSV 337
Query: 300 VSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS 359
VS ++ G V S + G++ + + +LI G + + +N+ +
Sbjct: 338 VSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDT 397
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQ 419
V+Y+ M+ G +G+ A SL++ M+ + P++VT+ LLS G V EG +
Sbjct: 398 ----VSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYK 453
Query: 420 LLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEM 459
+ N P Y I +D L R G +E A EL M
Sbjct: 454 CFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSM 493
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 157/390 (40%), Gaps = 71/390 (18%)
Query: 222 DAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRAL--- 278
D+ ++ ++R + F E V + D G PP + + V R CG + +
Sbjct: 68 DSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPP----SSHAVTSVLRACGKMENMVDG 123
Query: 279 EVLEDMAME----GCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTL 334
+ + A++ GC + LV ++ G E ++ + N V++N+L
Sbjct: 124 KPIHAQALKNGLCGC---VYVQTGLVGLYSRLGYIELAKKAFDDIAEK----NTVSWNSL 176
Query: 335 IHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTM----- 389
+H G D V + + E + V++N++++ K G + A SL+S M
Sbjct: 177 LHGYLESGELDEARRVFDKIPEKDA----VSWNLIISSYAKKGDMGNACSLFSAMPLKSP 232
Query: 390 -----------------VSESCFPDI-----VTYNTLLSGLCKEGFVDEGIQLLYLLTGT 427
++ + F + V++ T++SG K G V +L L++
Sbjct: 233 ASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKK 292
Query: 428 NCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKG--IVPDEITHSSLAWGFCGVDQL- 484
+ + Y+ I + G + A +L+++M+ + I PDEIT SS+ QL
Sbjct: 293 D----KLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVV---SANSQLG 345
Query: 485 EEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDL-----MVRSRCKPDEK 539
+ E + + IK I L +D+ ++ D M + K D
Sbjct: 346 NTSFGTWVESYITEHGIK-------IDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTV 398
Query: 540 IYDALIKAVADSGMVKEANDLHQRLIEWKI 569
Y A+I +GM EAN L +IE KI
Sbjct: 399 SYSAMIMGCGINGMATEANSLFTAMIEKKI 428
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/372 (18%), Positives = 158/372 (42%), Gaps = 40/372 (10%)
Query: 132 GRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKIINIMVMSGGVP--DVI 189
G + A + + +A K+ + S +L+ G ++ G++D+ ++ + +P D +
Sbjct: 153 GYIELAKKAFDDIAEKNTV----SWNSLLHGYLESGELDEARRVFD------KIPEKDAV 202
Query: 190 TCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQ 249
+ N++I K+G + +A L M L SP ++N +I G + A +++
Sbjct: 203 SWNLIISSYAKKGDMGNACSLFSAMPLK--SP--ASWNILIGGYVNCREMKLARTYFDAM 258
Query: 250 LRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVY 309
+K +++ +I + A E+ M+ + D + Y+++++ + G
Sbjct: 259 PQKNG----VSWITMISGYTKLGDVQSAEELFRLMSKK----DKLVYDAMIACYTQNGKP 310
Query: 310 EETYLVISNLLSRG--MQPNAVTYNTLIHSLS-----SHGYWDGVDDVLEIMNETSSPPT 362
++ + + +L R +QP+ +T ++++ + S S G W V + E
Sbjct: 311 KDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTW-----VESYITEHGIKID 365
Query: 363 RVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLY 422
+ +++ K G +A ++S + + D V+Y+ ++ G G E L
Sbjct: 366 DLLSTSLIDLYMKGGDFAKAFKMFSNLNKK----DTVSYSAMIMGCGINGMATEANSLFT 421
Query: 423 LLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVD 482
+ P +VT+ + + G ++ + ++ M + P + +
Sbjct: 422 AMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAG 481
Query: 483 QLEEAMELLKEM 494
+LEEA EL+K M
Sbjct: 482 RLEEAYELIKSM 493
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 109/502 (21%), Positives = 196/502 (39%), Gaps = 73/502 (14%)
Query: 113 FVRNDGF-----TNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIG 167
F+ GF N ++ R+ +A ++ + M + I S ++I G + G
Sbjct: 220 FILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVI----SWNSIINGYVSNG 275
Query: 168 QIDKGCKIINIMVMSGGVPDVIT-----------------------------------CN 192
+KG + M++SG D+ T CN
Sbjct: 276 LAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCN 335
Query: 193 MVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRK 252
++ K G L SA + +MS ++Y ++I G +G EAV +++ +
Sbjct: 336 TLLDMYSKCGDLDSAKAVFREMS----DRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 391
Query: 253 GCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEET 312
G P + T T ++ RY V E + DI N+L+ AK G +E
Sbjct: 392 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA 451
Query: 313 YLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMN----ETSSPPTRVTYNI 368
LV S + + + +++NT+I S + Y ++ L + N E P T
Sbjct: 452 ELVFSEMRVK----DIISWNTIIGGYSKNCY---ANEALSLFNLLLEEKRFSPDERTVAC 504
Query: 369 MLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTN 428
+L D+ ++ ++ F D N+L+ K G + L ++L
Sbjct: 505 VLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCG----ALLLAHMLFDDI 560
Query: 429 CSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCG----VDQL 484
S LV++ + I G G + A L+++M GI DEI+ SL + C VD+
Sbjct: 561 ASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYA-CSHSGLVDEG 619
Query: 485 EEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDAL 544
+++ K + ++H Y C++ L + + I+A + PD I+ AL
Sbjct: 620 WRFFNIMRHECKIEPTVEH--YACIVDMLARTGDL---IKAYRFIENMPIPPDATIWGAL 674
Query: 545 IKAVADSGMVKEANDLHQRLIE 566
+ VK A + +++ E
Sbjct: 675 LCGCRIHHDVKLAEKVAEKVFE 696
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/427 (19%), Positives = 162/427 (37%), Gaps = 53/427 (12%)
Query: 185 VPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVS 244
+ + N+++ L K G ++ L + M SG D+ T++ + + + +
Sbjct: 157 IEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQ 216
Query: 245 FWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTA 304
L+ G L+ + A +V ++M D+I++NS+++
Sbjct: 217 LHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTER----DVISWNSIINGYV 272
Query: 305 KQGVYEETYLVISNLLSRGMQPNAVTY--------------------------------- 331
G+ E+ V +L G++ + T
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 332 --NTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTM 389
NTL+ S G D V M++ S V+Y M+ G + GL A+ L+ M
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSV----VSYTSMIAGYAREGLAGEAVKLFEEM 388
Query: 390 VSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSM 449
E PD+ T +L+ + +DEG ++ + + + N +D A+ GSM
Sbjct: 389 EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSM 448
Query: 450 ESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLK-EMHKKDEKIKHTAYRC 508
+ A+ ++SEM V D I+ +++ G+ EA+ L + +K C
Sbjct: 449 QEAELVFSEM----RVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVAC 504
Query: 509 VILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLH-----QR 563
V+ D + ++R+ D + ++L+ A G + A+ L +
Sbjct: 505 VLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKD 564
Query: 564 LIEWKIL 570
L+ W ++
Sbjct: 565 LVSWTVM 571
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 124/306 (40%), Gaps = 28/306 (9%)
Query: 210 LVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVC 269
L+ D+ + D T++ + + G +A+ +K + CP T T +I +C
Sbjct: 125 LLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALC 184
Query: 270 RYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAV 329
RAL V+ ++ Y SL+ + Q +E VI ++ S G+ P+
Sbjct: 185 SRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLF 244
Query: 330 TYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTM 389
+N+L+ L N +P SGL+ A+++ M
Sbjct: 245 CFNSLLTCLCER-------------NVNRNP---------------SGLVPEALNIMLEM 276
Query: 390 VSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSM 449
S P ++YN LLS L + V E Q+L + + C P +Y + L G
Sbjct: 277 RSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRF 336
Query: 450 ESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCV 509
++ EMI +G P+ + L CGV+++ A++L ++M + Y +
Sbjct: 337 GKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLL 396
Query: 510 ILGLCK 515
I LCK
Sbjct: 397 IPKLCK 402
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 111/265 (41%), Gaps = 7/265 (2%)
Query: 163 LIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPD 222
L+K+G+ + I I+ D T +I LC RG++K A+ ++ +
Sbjct: 148 LVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNE 207
Query: 223 AITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRY------CGAI- 275
Y +++ G + N EA +D G P L + L+ +C G +
Sbjct: 208 LSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVP 267
Query: 276 RALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLI 335
AL ++ +M P ++YN L+S + E+ ++ + G P+ +Y ++
Sbjct: 268 EALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVV 327
Query: 336 HSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCF 395
L G + + +++ M E P R Y ++ LC ++ A+ L+ M S
Sbjct: 328 RVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVG 387
Query: 396 PDIVTYNTLLSGLCKEGFVDEGIQL 420
Y+ L+ LCK G ++G +L
Sbjct: 388 GYGQVYDLLIPKLCKGGNFEKGREL 412
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 107/243 (44%), Gaps = 7/243 (2%)
Query: 331 YNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMV 390
+N ++ L+ + +L + + + + T++I+ L K G + AI ++ +
Sbjct: 106 FNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILD 165
Query: 391 SESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSME 450
SC D T ++S LC G V + +++ L Y + G + +++
Sbjct: 166 KFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVK 225
Query: 451 SAKELYSEMIGKGIVPDEITHSSLAWGFC--GVDQ-----LEEAMELLKEMHKKDEKIKH 503
A+ + +M GI PD +SL C V++ + EA+ ++ EM +
Sbjct: 226 EARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTS 285
Query: 504 TAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQR 563
+Y ++ L + R+V + Q L+ M RS C PD Y +++ + +G + N +
Sbjct: 286 MSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDE 345
Query: 564 LIE 566
+IE
Sbjct: 346 MIE 348
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 126/321 (39%), Gaps = 19/321 (5%)
Query: 187 DVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFW 246
D T ++V L K G + A+ + + + C D T II + +G+ A+
Sbjct: 137 DKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVM 196
Query: 247 KDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQ 306
L Y L+ A V++DM G PD+ +NSL++ ++
Sbjct: 197 HHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCER 256
Query: 307 -------GVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSS 359
G+ E ++ + S +QP +++YN L+ L +LE M +
Sbjct: 257 NVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGC 316
Query: 360 PPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQ 419
P +Y ++ L +G + + M+ P+ Y L+ LC V+ +Q
Sbjct: 317 DPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQ 376
Query: 420 LLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFC 479
L + ++ Y++ I L + G+ E +EL+ E + + C
Sbjct: 377 LFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSIDVTLS-----------C 425
Query: 480 GVDQLEEAM-ELLKEMHKKDE 499
+ L+ ++ E+ K M K+E
Sbjct: 426 SISLLDPSVTEVFKPMKMKEE 446
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 111/279 (39%), Gaps = 34/279 (12%)
Query: 116 NDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQI---PHFPSCTNLIRGLIKIGQIDKG 172
DGFT I+ LC+RG + R + +M + +L+ G + +
Sbjct: 171 QDGFTVTAIISALCSRGHV---KRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEA 227
Query: 173 CKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRG 232
++I M +G PD+ N ++ LC+R ++ SG P+A+ +R
Sbjct: 228 RRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNP---------SGLVPEALNIMLEMRS 278
Query: 233 MFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPD 292
+K Q P ++Y +L+ + R + ++LE M GC PD
Sbjct: 279 -------------YKIQ------PTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPD 319
Query: 293 IITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLE 352
+Y +V G + + ++ ++ RG +P Y LI L + + E
Sbjct: 320 TGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFE 379
Query: 353 IMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVS 391
M +S Y++++ LCK G ++ L+ +S
Sbjct: 380 KMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALS 418
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 147/367 (40%), Gaps = 59/367 (16%)
Query: 187 DVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFW 246
DV++ N +I + G + LV +M G D IT ++ A +
Sbjct: 383 DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSA---------ASNLR 433
Query: 247 KDQLRKGCPPYLITYTVLIELVCRY-------CGAIRALEVLEDMAMEG---CYPDIITY 296
++ K +LI + E + Y G IR + L EG D T+
Sbjct: 434 NKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKL----FEGSGYAERDQATW 489
Query: 297 NSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLI---------------HSLSSH 341
NS++S + G E+T+LV +L + ++PNAVT +++ H S
Sbjct: 490 NSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIR 549
Query: 342 GYWD----------------GVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISL 385
Y D G E M + VTY M+ G + G+ +RAISL
Sbjct: 550 QYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISL 609
Query: 386 YSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGT-NCSPGLVTYNIAIDGLA 444
+ +M PD +T+ +LS G +DEG+++ + N P Y D L
Sbjct: 610 FLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLG 669
Query: 445 RMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVD-QLEEAMELLKEMHKKDEKIKH 503
R+G + A E + +G + E+ S L G C + +LE A + + + K D+
Sbjct: 670 RVGRVNEAYEFVKGLGEEGNIA-ELWGSLL--GSCKLHGELELAETVSERLAKFDKGKNF 726
Query: 504 TAYRCVI 510
+ Y ++
Sbjct: 727 SGYEVLL 733
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/285 (18%), Positives = 125/285 (43%), Gaps = 27/285 (9%)
Query: 292 DIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLS----------SH 341
D++++N+++S + G+ +E +++ + +G + + +T L+ + S +H
Sbjct: 383 DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTH 442
Query: 342 GYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTY 401
+ E MN + +++ KSGL+ + L+ S D T+
Sbjct: 443 AFLIRQGIQFEGMN-----------SYLIDMYSKSGLIRISQKLFEG--SGYAERDQATW 489
Query: 402 NTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIG 461
N+++SG + G ++ + + N P VT + +++GS++ K+L+ I
Sbjct: 490 NSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIR 549
Query: 462 KGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDI 521
+ + + S+L + ++ A ++ + +++ Y +ILG + +
Sbjct: 550 QYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNS----VTYTTMILGYGQHGMGER 605
Query: 522 AIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRLIE 566
AI M S KPD + A++ A + SG++ E + + + E
Sbjct: 606 AISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMRE 650
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/406 (18%), Positives = 166/406 (40%), Gaps = 67/406 (16%)
Query: 117 DGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCKII 176
D F + GR+ A ++ + M+ K + +C+ L+ + G +++ +I+
Sbjct: 150 DAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVV----TCSALLCAYARKGCLEEVVRIL 205
Query: 177 NIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDK 236
+ M SG ++++ N ++ G + GY K AV + + + G PD +T ++++ + D
Sbjct: 206 SEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDS 265
Query: 237 GNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCR--------------------YCGAI- 275
N +++G + +I++ + C A
Sbjct: 266 EMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYI 325
Query: 276 ----------RALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQ 325
+ALE+ E + +++++ S+++ A+ G E + + G++
Sbjct: 326 TGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVK 385
Query: 326 PNAVTYNTLI----------HSLSSHGY------WDGVD---------------DVLEIM 354
PN VT +++ H S+HG+ D V ++ +I+
Sbjct: 386 PNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIV 445
Query: 355 NETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFV 414
V +N ++NG G +S++ +++ PD +++ +LLS + G
Sbjct: 446 FNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLT 505
Query: 415 DEGIQLLYLLTGT-NCSPGLVTYNIAIDGLARMGSMESAKELYSEM 459
DEG + +++ P L Y+ ++ L R G ++ A +L EM
Sbjct: 506 DEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEM 551
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/395 (21%), Positives = 165/395 (41%), Gaps = 43/395 (10%)
Query: 187 DVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFW 246
DV+TC+ ++ ++G L+ V ++ +M SG + +++N I+ G G EAV +
Sbjct: 181 DVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMF 240
Query: 247 KDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQ 306
+ G P +T + ++ V + + +G D ++++ K
Sbjct: 241 QKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKS 300
Query: 307 GVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTY 366
G Y +IS L ++ A N I LS +G D ++ E+ E + V++
Sbjct: 301 G---HVYGIIS-LFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSW 356
Query: 367 NIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLL----------SGLCKEGF--- 413
++ G ++G A+ L+ M P+ VT ++L G GF
Sbjct: 357 TSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVR 416
Query: 414 --------VDEGIQLLYLLTGT--------NCSP--GLVTYNIAIDGLARMGSMESAKEL 455
V + +Y G N P LV +N ++G + G + +
Sbjct: 417 VHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSI 476
Query: 456 YSEMIGKGIVPDEITHSSL--AWGFCGV-DQLEEAMELLKEMHKKDEKIKHTAYRCVILG 512
+ ++ + PD I+ +SL A G G+ D+ + +++ E + +++H Y C++
Sbjct: 477 FESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEH--YSCMVNL 534
Query: 513 LCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKA 547
L + K+ +A DL+ +PD ++ AL+ +
Sbjct: 535 LGRAGKLQ---EAYDLIKEMPFEPDSCVWGALLNS 566
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 111/262 (42%), Gaps = 14/262 (5%)
Query: 317 SNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKS 376
+ +L G Q + LI S S++ ++ D VL+ + + PT +++ ++ L K+
Sbjct: 39 ARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPD----PTIYSFSSLIYALTKA 94
Query: 377 GLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKE--GF-VDEGIQLLYLLTGTNCSPGL 433
L ++I ++S M S PD L +C E F V + I + ++G +
Sbjct: 95 KLFTQSIGVFSRMFSHGLIPDSHVLPNLFK-VCAELSAFKVGKQIHCVSCVSGLDMDA-- 151
Query: 434 VTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELLKE 493
R G M A++++ M K D +T S+L + LEE + +L E
Sbjct: 152 FVQGSMFHMYMRCGRMGDARKVFDRMSDK----DVVTCSALLCAYARKGCLEEVVRILSE 207
Query: 494 MHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAVADSGM 553
M + ++ ++ G + A+ + PD+ +++ +V DS M
Sbjct: 208 MESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEM 267
Query: 554 VKEANDLHQRLIEWKILKTEII 575
+ +H +I+ +LK + +
Sbjct: 268 LNMGRLIHGYVIKQGLLKDKCV 289
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 145/368 (39%), Gaps = 67/368 (18%)
Query: 212 EDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYL----ITYTVLIEL 267
++M + + D +YN +++ G + A +K+ R L TY +I++
Sbjct: 324 KNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKV 383
Query: 268 VCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPN 327
AL+V +DM G P+ T++SL+S A G+ E+ + +L+ G +PN
Sbjct: 384 FADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPN 443
Query: 328 AVTYNTLIHS----------LSSHGYWDG--------VDDVLEIMNETSSPPTRVTYNIM 369
+ +N L+H+ W G DD++ TSSP NI+
Sbjct: 444 SQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVS-KGRTSSP------NIL 496
Query: 370 LNGLCKSGLLDRAISLYSTMVSESCF-PDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTN 428
N S + + S Y CF P TYN LL GT+
Sbjct: 497 KNNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKA-----------------CGTD 539
Query: 429 CSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAM 488
G KEL EM G+ P++IT S+L G +E A+
Sbjct: 540 YYRG--------------------KELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAV 579
Query: 489 ELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAV 548
+L+ MH + AY I + + + +A + M R + KP+ Y+ L+KA
Sbjct: 580 RILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKAR 639
Query: 549 ADSGMVKE 556
+ G + E
Sbjct: 640 SKYGSLLE 647
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 132/332 (39%), Gaps = 34/332 (10%)
Query: 114 VRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKS-----QIPHFPSCTNLIRGLIKIGQ 168
V D + N +L+ C GR+ A + + R ++ F CT +I+
Sbjct: 331 VTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCT-IIKVFADAKM 389
Query: 169 IDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNT 228
K+ + M G P+ T + +I G ++ A L E+M SGC P++ +N
Sbjct: 390 WKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNI 449
Query: 229 IIRGMFDKGNFNEAVSF---WK-----------DQLRKG--CPPYLITYTVLIELVCRYC 272
++ + ++ A WK D + KG P ++ LV R
Sbjct: 450 LLHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNS 509
Query: 273 GA--IRALEVLEDMAMEGCY-PDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAV 329
+ I+A + C+ P TYN L+ Y ++ + S G+ PN +
Sbjct: 510 NSPYIQA-------SKRFCFKPTTATYNILLKACGTD--YYRGKELMDEMKSLGLSPNQI 560
Query: 330 TYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTM 389
T++TLI G +G +L M+ + P V Y + ++ L A SL+ M
Sbjct: 561 TWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEM 620
Query: 390 VSESCFPDIVTYNTLLSGLCKEGFVDEGIQLL 421
P+ VTYNTLL K G + E Q L
Sbjct: 621 RRYQIKPNWVTYNTLLKARSKYGSLLEVRQCL 652
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 94/445 (21%), Positives = 188/445 (42%), Gaps = 55/445 (12%)
Query: 158 NLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSL- 216
+L+ + G++D K+ + M +V++ +I G +R + K AVDL M
Sbjct: 174 SLVHFYAECGELDSARKVFDEM----SERNVVSWTSMICGYARRDFAKDAVDLFFRMVRD 229
Query: 217 SGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIR 276
+P+++T +I + + G + + L+++ + C AI
Sbjct: 230 EEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMK-CNAID 288
Query: 277 ALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIH 336
+ L D E ++ N++ S +QG+ E V + ++ G++P+ ++ + I
Sbjct: 289 VAKRLFD---EYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAIS 345
Query: 337 SLSS----------HGY--------WDGV--------------DDVLEIMNETSSPPTRV 364
S S HGY WD + D I + S+ T V
Sbjct: 346 SCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK-TVV 404
Query: 365 TYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLL 424
T+N ++ G ++G +D A + TM + +IV++NT++SGL + +E I++ +
Sbjct: 405 TWNSIVAGYVENGEVDAAWETFETMPEK----NIVSWNTIISGLVQGSLFEEAIEVFCSM 460
Query: 425 T---GTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGV 481
G N + G+ +IA +G+++ AK +Y + GI D ++L F
Sbjct: 461 QSQEGVN-ADGVTMMSIA-SACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRC 518
Query: 482 DQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIY 541
E AM + + +D +A+ I + + AI+ D M+ KPD +
Sbjct: 519 GDPESAMSIFNSLTNRDV----SAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAF 574
Query: 542 DALIKAVADSGMVKEANDLHQRLIE 566
+ A + G+V++ ++ +++
Sbjct: 575 VGALTACSHGGLVQQGKEIFYSMLK 599
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 112/258 (43%), Gaps = 9/258 (3%)
Query: 310 EETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIM 369
+E + +L +G+ + T L+ G + + E+ + S T YN +
Sbjct: 46 DELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSL 105
Query: 370 LNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNC 429
+ G SGL + AI L+ M++ PD T+ LS K GIQ+ L+
Sbjct: 106 IRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGY 165
Query: 430 SPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAME 489
+ L N + A G ++SA++++ EM + +V + +S+ G+ D ++A++
Sbjct: 166 AKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVV----SWTSMICGYARRDFAKDAVD 221
Query: 490 LLKEMHKKDEKIKHTAYR-CVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAV 548
L M + +E ++ CVI K ++ + + S ++ D ++ A+
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI----EVNDLMVSAL 277
Query: 549 ADSGMVKEANDLHQRLIE 566
D M A D+ +RL +
Sbjct: 278 VDMYMKCNAIDVAKRLFD 295
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/428 (18%), Positives = 155/428 (36%), Gaps = 55/428 (12%)
Query: 171 KGCKIINIMVM-------SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDA 223
K CK I+ + M G DV T ++ C+ G +S E S
Sbjct: 40 KNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTC 99
Query: 224 ITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLED 283
YN++IRG G NEA+ + + G P T+ + + +++
Sbjct: 100 FMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGL 159
Query: 284 MAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGY 343
+ G D+ NSLV F A+ G + V + R N V++ ++I + +
Sbjct: 160 IVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSER----NVVSWTSMICGYARRDF 215
Query: 344 W-DGVDDVLEIMNETSSPPTRVTY--------------------------NIMLNGLCKS 376
D VD ++ + P VT I +N L S
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS 275
Query: 377 GLLD-----RAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSP 431
L+D AI + + E ++ N + S ++G E + + L+ + P
Sbjct: 276 ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRP 335
Query: 432 GLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELL 491
++ AI +++ ++ K + ++ G + ++L + + + A +
Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 395
Query: 492 KEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKI--YDALIKAVA 549
M K + ++ G + +VD A + + M P++ I ++ +I +
Sbjct: 396 DRMSNK----TVVTWNSIVAGYVENGEVDAAWETFETM------PEKNIVSWNTIISGLV 445
Query: 550 DSGMVKEA 557
+ +EA
Sbjct: 446 QGSLFEEA 453
>AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr5:26952352-26955480 FORWARD LENGTH=798
Length = 798
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 157/383 (40%), Gaps = 29/383 (7%)
Query: 119 FTNNKILQNLCTRGRLMA---AARLIEIMARKSQIPHFPS---CTNLIRGLIKIGQIDKG 172
FT +++L+ + GR + A+ ++ + + H S T L+ L + +
Sbjct: 215 FTEDQMLKIVDRLGRKQSWKQASAVVHWVYSDKKRKHLRSRFVYTKLLSVLGFARRPQEA 274
Query: 173 CKIINIMVMSGGV-PDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGC------------ 219
+I N M+ + PD+ + + L + G LK + ++E M
Sbjct: 275 LQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGLLKELLKVIERMRQKPTKLTKNLRQKNWD 334
Query: 220 ---SPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRK-GCPPYLITYTVLIELVCRYCGAI 275
PD + YN I+ + +AVS+ +LRK G P TY + +E++
Sbjct: 335 PVLEPDLVVYNAILNACVPTLQW-KAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFD 393
Query: 276 RALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLI 335
R + M G P ITY LV ++G EE + ++ +G+ Y L
Sbjct: 394 RVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELA 453
Query: 336 HSLSSHGYW-DGVDDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESC 394
L ++G W D + +V + + P +T+ ++ G +D ++++ M + C
Sbjct: 454 CCLCNNGRWCDAMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMAIFQYM-KDKC 512
Query: 395 FPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTG---TNCSPGLVTYNIAIDGLARMGSMES 451
P+I T N +L + E +L + T+ P TY+ ++ AR E
Sbjct: 513 DPNIGTANMMLKVYGRNDMFSEAKELFEEIVSRKETHLVPNEYTYSFMLEASARSLQWEY 572
Query: 452 AKELYSEMIGKGIVPDEITHSSL 474
+ +Y M+ G D+ H+S+
Sbjct: 573 FEHVYQTMVLSGYQMDQTKHASM 595
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 102/240 (42%), Gaps = 15/240 (6%)
Query: 182 SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNE 241
+G P+ T + + + + G D M SG +P AITY ++R ++ +G E
Sbjct: 370 NGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEE 429
Query: 242 AVSFWKDQLRKGCPPYLITYTVLIELVC------RYCGAIRALEVLEDMAMEGCYPDIIT 295
AV +D +KG + T +V EL C R+C A+ LEV +E C P IT
Sbjct: 430 AVEAVRDMEQKGV---IGTGSVYYELACCLCNNGRWCDAM--LEVGRMKRLENCRPLEIT 484
Query: 296 YNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIM- 354
+ L++ + G ++ + I + PN T N ++ + + ++ E +
Sbjct: 485 FTGLIAASLNGGHVDDC-MAIFQYMKDKCDPNIGTANMMLKVYGRNDMFSEAKELFEEIV 543
Query: 355 --NETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEG 412
ET P TY+ ML +S + +Y TMV D + ++L + G
Sbjct: 544 SRKETHLVPNEYTYSFMLEASARSLQWEYFEHVYQTMVLSGYQMDQTKHASMLIEASRAG 603
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 91/235 (38%), Gaps = 48/235 (20%)
Query: 291 PDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDV 350
PD++ YN++++ ++ V L G++PN TY + + G +D V D
Sbjct: 339 PDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHDF 398
Query: 351 LEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVS------------------- 391
M + P +TY +++ L + G ++ A+ M
Sbjct: 399 FRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLCN 458
Query: 392 -----------------ESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSPGLV 434
E+C P +T+ L++ G VD+ + + + C P +
Sbjct: 459 NGRWCDAMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMAIFQYMKD-KCDPNIG 517
Query: 435 TYNIAIDGLARMGSMESAKELYSEMIGKG---IVPDEITHS--------SLAWGF 478
T N+ + R AKEL+ E++ + +VP+E T+S SL W +
Sbjct: 518 TANMMLKVYGRNDMFSEAKELFEEIVSRKETHLVPNEYTYSFMLEASARSLQWEY 572
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/333 (18%), Positives = 131/333 (39%), Gaps = 48/333 (14%)
Query: 112 PFVRNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQI-PHFPSCTNLIRGLIKIGQID 170
P + D N IL N C A + + RK+ + P+ + + +++ G+ D
Sbjct: 335 PVLEPDLVVYNAIL-NACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFD 393
Query: 171 KGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSG------------ 218
+ M SG P IT +++ L + G ++ AV+ V DM G
Sbjct: 394 RVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELA 453
Query: 219 ------------------------CSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGC 254
C P IT+ +I + G+ ++ ++ ++ ++ C
Sbjct: 454 CCLCNNGRWCDAMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMAIFQ-YMKDKC 512
Query: 255 PPYLITYTVLIELVCRYCGAIRALEVLEDMAMEG---CYPDIITYNSLVSFTAKQGVYEE 311
P + T +++++ R A E+ E++ P+ TY+ ++ +A+ +E
Sbjct: 513 DPNIGTANMMLKVYGRNDMFSEAKELFEEIVSRKETHLVPNEYTYSFMLEASARSLQWEY 572
Query: 312 TYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIMLN 371
V ++ G Q + + +++ S G W ++ + + E P + + +L
Sbjct: 573 FEHVYQTMVLSGYQMDQTKHASMLIEASRAGKWSLLEHAFDAVLEDGEIPHPLFFTELLC 632
Query: 372 GLCKSGLLDRAISLYSTM------VSESCFPDI 398
G RAI+L +T+ +SE + D+
Sbjct: 633 HATAKGDFQRAITLINTVALASFQISEEEWTDL 665
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 94/445 (21%), Positives = 188/445 (42%), Gaps = 55/445 (12%)
Query: 158 NLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSL- 216
+L+ + G++D K+ + M +V++ +I G +R + K AVDL M
Sbjct: 174 SLVHFYAECGELDSARKVFDEM----SERNVVSWTSMICGYARRDFAKDAVDLFFRMVRD 229
Query: 217 SGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIR 276
+P+++T +I + + G + + L+++ + C AI
Sbjct: 230 EEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMK-CNAID 288
Query: 277 ALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIH 336
+ L D E ++ N++ S +QG+ E V + ++ G++P+ ++ + I
Sbjct: 289 VAKRLFD---EYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAIS 345
Query: 337 SLSS----------HGY--------WDGV--------------DDVLEIMNETSSPPTRV 364
S S HGY WD + D I + S+ T V
Sbjct: 346 SCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK-TVV 404
Query: 365 TYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLL 424
T+N ++ G ++G +D A + TM + +IV++NT++SGL + +E I++ +
Sbjct: 405 TWNSIVAGYVENGEVDAAWETFETMPEK----NIVSWNTIISGLVQGSLFEEAIEVFCSM 460
Query: 425 T---GTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGV 481
G N + G+ +IA +G+++ AK +Y + GI D ++L F
Sbjct: 461 QSQEGVN-ADGVTMMSIA-SACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRC 518
Query: 482 DQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIY 541
E AM + + +D +A+ I + + AI+ D M+ KPD +
Sbjct: 519 GDPESAMSIFNSLTNRDV----SAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAF 574
Query: 542 DALIKAVADSGMVKEANDLHQRLIE 566
+ A + G+V++ ++ +++
Sbjct: 575 VGALTACSHGGLVQQGKEIFYSMLK 599
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 112/258 (43%), Gaps = 9/258 (3%)
Query: 310 EETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTYNIM 369
+E + +L +G+ + T L+ G + + E+ + S T YN +
Sbjct: 46 DELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSL 105
Query: 370 LNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNC 429
+ G SGL + AI L+ M++ PD T+ LS K GIQ+ L+
Sbjct: 106 IRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGY 165
Query: 430 SPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAME 489
+ L N + A G ++SA++++ EM + +V + +S+ G+ D ++A++
Sbjct: 166 AKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVV----SWTSMICGYARRDFAKDAVD 221
Query: 490 LLKEMHKKDEKIKHTAYR-CVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYDALIKAV 548
L M + +E ++ CVI K ++ + + S ++ D ++ A+
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI----EVNDLMVSAL 277
Query: 549 ADSGMVKEANDLHQRLIE 566
D M A D+ +RL +
Sbjct: 278 VDMYMKCNAIDVAKRLFD 295
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 79/428 (18%), Positives = 155/428 (36%), Gaps = 55/428 (12%)
Query: 171 KGCKIINIMVM-------SGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDA 223
K CK I+ + M G DV T ++ C+ G +S E S
Sbjct: 40 KNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTC 99
Query: 224 ITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLED 283
YN++IRG G NEA+ + + G P T+ + + +++
Sbjct: 100 FMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGL 159
Query: 284 MAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGY 343
+ G D+ NSLV F A+ G + V + R N V++ ++I + +
Sbjct: 160 IVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSER----NVVSWTSMICGYARRDF 215
Query: 344 W-DGVDDVLEIMNETSSPPTRVTY--------------------------NIMLNGLCKS 376
D VD ++ + P VT I +N L S
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS 275
Query: 377 GLLD-----RAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTGTNCSP 431
L+D AI + + E ++ N + S ++G E + + L+ + P
Sbjct: 276 ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRP 335
Query: 432 GLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVDQLEEAMELL 491
++ AI +++ ++ K + ++ G + ++L + + + A +
Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 395
Query: 492 KEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKI--YDALIKAVA 549
M K + ++ G + +VD A + + M P++ I ++ +I +
Sbjct: 396 DRMSNK----TVVTWNSIVAGYVENGEVDAAWETFETM------PEKNIVSWNTIISGLV 445
Query: 550 DSGMVKEA 557
+ +EA
Sbjct: 446 QGSLFEEA 453
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 142/339 (41%), Gaps = 42/339 (12%)
Query: 156 CTNLIRGLIKIGQIDKGCKIINIMVMSGGVPDVITCNMVIGGLCKRGYLKSAVDLVEDMS 215
C +I G + ++ + + GG D+I+ N +I G K +SA +L M
Sbjct: 241 CNAMISSYADCGSVSDAKRVFDGL---GGSKDLISWNSMIAGFSKHELKESAFELFIQMQ 297
Query: 216 LSGCSPDAITYNTIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRY-CGA 274
D TY ++ + + S ++KG LI + ++ G
Sbjct: 298 RHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGT 357
Query: 275 IR-ALEVLEDMAMEGCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNT 333
+ AL + E + + D+I++NS+++ A++G+ E+ S L S ++ + ++
Sbjct: 358 MEDALSLFESLKSK----DLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSA 413
Query: 334 L---------------IHSLSSH-GYWDG----------------VDDVLEIMNETSSPP 361
L IH+L++ G+ ++ + + SS
Sbjct: 414 LLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKH 473
Query: 362 TRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLL 421
+ V +N M+ G + GL ++ L+S M +++ D VT+ +L+ G + EG++LL
Sbjct: 474 STVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELL 533
Query: 422 YLLTGT-NCSPGLVTYNIAIDGLARMGSMESAKELYSEM 459
L+ P + Y A+D L R G + AKEL M
Sbjct: 534 NLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESM 572
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 98/463 (21%), Positives = 174/463 (37%), Gaps = 69/463 (14%)
Query: 115 RNDGFTNNKILQNLCTRGRLMAAARLIEIMARKSQIPHFPSCTNLIRGLIKIGQIDKGCK 174
+ D + N ++ + G+L A L M R S + L++G+ + + D G +
Sbjct: 63 KRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLG-E 121
Query: 175 IINIMVMSGGVPDVITCNMVIG-------GLCKRGYLKSAVDLVEDMSLSGCSPDAITYN 227
++ +V+ GG CN+ +G C+R ++ A + +++S P+++++N
Sbjct: 122 QVHGLVIKGGYE----CNVYVGSSLVDMYAKCER--VEDAFEAFKEIS----EPNSVSWN 171
Query: 228 TIIRGMFDKGNFNEAVSFWKDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAME 287
+I G + A FW L+ + V G L L D
Sbjct: 172 ALIAGFVQVRDIKTA--FW-----------LLGLMEMKAAVTMDAGTFAPLLTLLD---- 214
Query: 288 GCYPDIITYNSLVSFTAKQGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGV 347
D + N L AK +L G+Q N +I S + G V
Sbjct: 215 ----DPMFCNLLKQVHAK-------------VLKLGLQHEITICNAMISSYADCG---SV 254
Query: 348 DDVLEIMNETSSPPTRVTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSG 407
D + + +++N M+ G K L + A L+ M DI TY LLS
Sbjct: 255 SDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSA 314
Query: 408 LCKEGFVDEGIQLLYLLTGTNCSPGLVTYNIAIDGLARM------GSMESAKELYSEMIG 461
E G L G GL A + L M G+ME A L+ +
Sbjct: 315 CSGEEHQIFGKS----LHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKS 370
Query: 462 KGIVPDEITHSSLAWGFCGVDQLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDI 521
K D I+ +S+ GF E+A++ + + K+ A+ ++ + +
Sbjct: 371 K----DLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQL 426
Query: 522 AIQALDLMVRSRCKPDEKIYDALIKAVADSGMVKEANDLHQRL 564
Q L +S +E + +LI + G+++ A Q++
Sbjct: 427 GQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQI 469
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/372 (19%), Positives = 166/372 (44%), Gaps = 36/372 (9%)
Query: 188 VITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMF-DKGNFNEAVSFW 246
+ N +I + G + A+ + M + + IT+N+++ G+ D EA
Sbjct: 61 IFPLNKIIARCVRSGDIDGALRVFHGMR----AKNTITWNSLLIGISKDPSRMMEA---- 112
Query: 247 KDQLRKGCP-PYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAK 305
QL P P +Y +++ R +A + M + D ++N++++ A+
Sbjct: 113 -HQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMP----FKDAASWNTMITGYAR 167
Query: 306 QGVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTR-- 363
+G E+ L M+ N V++N +I G + ++ P R
Sbjct: 168 RGEMEKA----RELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKV------APVRGV 217
Query: 364 VTYNIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYL 423
V + M+ G K+ ++ A +++ M ++VT+N ++SG + ++G++L
Sbjct: 218 VAWTAMITGYMKAKKVELAEAMFKDMTVNK---NLVTWNAMISGYVENSRPEDGLKLFRA 274
Query: 424 LTGTNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITH-SSLAWGFCGVD 482
+ P + A+ G + + +++ ++++ +++ K + +++T +SL +C
Sbjct: 275 MLEEGIRPNSSGLSSALLGCSELSALQLGRQIH-QIVSKSTLCNDVTALTSLISMYCKCG 333
Query: 483 QLEEAMELLKEMHKKDEKIKHTAYRCVILGLCKQRKVDIAIQALDLMVRSRCKPDEKIYD 542
+L +A +L + M KKD A+ +I G + D A+ M+ ++ +PD +
Sbjct: 334 ELGDAWKLFEVMKKKDV----VAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFV 389
Query: 543 ALIKAVADSGMV 554
A++ A +G+V
Sbjct: 390 AVLLACNHAGLV 401
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/352 (19%), Positives = 154/352 (43%), Gaps = 31/352 (8%)
Query: 187 DVITCNMVIGGLCKRGYLKSAVDLVEDMSLSGCSPDAITYNTIIRGMFDKGNFNEAVSFW 246
D + N +I G +RG ++ A +L M + +++N +I G + G+ +A F+
Sbjct: 154 DAASWNTMITGYARRGEMEKARELFYSM----MEKNEVSWNAMISGYIECGDLEKASHFF 209
Query: 247 KDQLRKGCPPYLITYTVLIELVCRYCGAIRALEVLEDMAMEGCYPDIITYNSLVSFTAKQ 306
K +G ++ +T +I + A + +DM + +++T+N+++S +
Sbjct: 210 KVAPVRG----VVAWTAMITGYMKAKKVELAEAMFKDMTVN---KNLVTWNAMISGYVEN 262
Query: 307 GVYEETYLVISNLLSRGMQPNAVTYNTLIHSLSSHGYWDGVDDVLEIMNETSSPPTRVTY 366
E+ + +L G++PN+ ++ + S + +I+++++
Sbjct: 263 SRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTAL 322
Query: 367 NIMLNGLCKSGLLDRAISLYSTMVSESCFPDIVTYNTLLSGLCKEGFVDEGIQLLYLLTG 426
+++ CK G L A L+ M + D+V +N ++SG + G D+ + L +
Sbjct: 323 TSLISMYCKCGELGDAWKLFEVMKKK----DVVAWNAMISGYAQHGNADKALCLFREMID 378
Query: 427 TNCSPGLVTYNIAIDGLARMGSMESAKELYSEMIGKGIVPDEITHSSLAWGFCGVD---- 482
P +T+ + G + + M+ V + H + C VD
Sbjct: 379 NKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYT-----CMVDLLGR 433
Query: 483 --QLEEAMELLKEMHKKDEKIKHTAYRCVILGLCK-QRKVDIAIQALDLMVR 531
+LEEA++L++ M + H A +LG C+ + V++A A + +++
Sbjct: 434 AGKLEEALKLIRSMPFR----PHAAVFGTLLGACRVHKNVELAEFAAEKLLQ 481