Miyakogusa Predicted Gene

Lj5g3v1355040.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1355040.1 Non Chatacterized Hit- tr|I1LG02|I1LG02_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,82.93,0,SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; RRM,RNA recognition motif domain;
no description,Nu,CUFF.55179.1
         (231 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G04500.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) famil...   293   6e-80
AT3G14100.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) famil...    76   2e-14
AT1G54080.1 | Symbols: UBP1A | oligouridylate-binding protein 1A...    75   3e-14
AT1G17370.1 | Symbols: UBP1B | oligouridylate binding protein 1B...    75   4e-14
AT1G17370.2 | Symbols: UBP1B | oligouridylate binding protein 1B...    75   5e-14
AT3G19130.1 | Symbols: ATRBP47B, RBP47B | RNA-binding protein 47...    72   4e-13
AT5G54900.1 | Symbols: ATRBP45A, RBP45A | RNA-binding protein 45...    71   6e-13
AT1G54080.2 | Symbols: UBP1A | oligouridylate-binding protein 1A...    71   7e-13
AT1G11650.1 | Symbols: ATRBP45B, RBP45B | RNA-binding (RRM/RBD/R...    70   8e-13
AT4G27000.1 | Symbols: ATRBP45C | RNA-binding (RRM/RBD/RNP motif...    70   1e-12
AT1G11650.2 | Symbols: ATRBP45B, RBP45B | RNA-binding (RRM/RBD/R...    70   1e-12
AT5G19350.2 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) famil...    68   5e-12
AT5G19350.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) famil...    68   6e-12
AT1G47490.2 | Symbols: ATRBP47C, RBP47C | RNA-binding protein 47...    67   8e-12
AT1G49600.1 | Symbols: ATRBP47A, RBP47A | RNA-binding protein 47...    67   1e-11
AT1G47490.1 | Symbols: ATRBP47C, RBP47C | RNA-binding protein 47...    67   1e-11
AT1G47500.1 | Symbols: ATRBP47C', RBP47C' | RNA-binding protein ...    65   5e-11
AT4G39260.2 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold, circa...    63   2e-10
AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold, circa...    63   2e-10
AT3G23830.2 | Symbols: GR-RBP4, GRP4 | glycine-rich RNA-binding ...    62   3e-10
AT3G23830.1 | Symbols: GR-RBP4, GRP4 | glycine-rich RNA-binding ...    62   3e-10
AT4G39260.3 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold, circa...    62   4e-10
AT1G58470.1 | Symbols: ATRBP1, RBP1 | RNA-binding protein 1 | ch...    61   5e-10
AT1G71770.2 | Symbols: PAB5 | poly(A)-binding protein 5 | chr1:2...    61   7e-10
AT1G71770.1 | Symbols: PAB5 | poly(A)-binding protein 5 | chr1:2...    61   7e-10
AT1G60000.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) famil...    60   1e-09
AT5G04280.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) famil...    59   2e-09
AT1G22760.1 | Symbols: PAB3 | poly(A) binding protein 3 | chr1:8...    59   4e-09
AT2G23350.1 | Symbols: PAB4, PABP4 | poly(A) binding protein 4 |...    58   5e-09
AT4G34110.1 | Symbols: PAB2, PABP2, ATPAB2 | poly(A) binding pro...    57   1e-08
AT3G52380.1 | Symbols: CP33, PDE322 | chloroplast RNA-binding pr...    56   3e-08
AT2G21660.2 | Symbols: ATGRP7, CCR2 | cold, circadian rhythm, an...    55   3e-08
AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP7 | cold, circa...    55   3e-08
AT3G08000.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) famil...    55   4e-08
AT4G39260.4 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold, circa...    55   5e-08
AT1G49760.2 | Symbols: PAB8 | poly(A) binding protein 8 | chr1:1...    55   5e-08
AT1G49760.1 | Symbols: PAB8, PABP8 | poly(A) binding protein 8 |...    55   5e-08
AT5G51300.3 | Symbols:  | splicing factor-related | chr5:2084988...    54   7e-08
AT5G51300.2 | Symbols:  | splicing factor-related | chr5:2084988...    54   7e-08
AT5G51300.1 | Symbols:  | splicing factor-related | chr5:2084988...    54   7e-08
AT4G13850.3 | Symbols: ATGRP2 | glycine-rich RNA-binding protein...    54   8e-08
AT4G13850.2 | Symbols: ATGRP2 | glycine-rich RNA-binding protein...    54   8e-08
AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | glycine-rich RNA-...    54   8e-08
AT4G13850.4 | Symbols: ATGRP2 | glycine-rich RNA-binding protein...    54   9e-08
AT5G50250.1 | Symbols: CP31B | chloroplast RNA-binding protein 3...    54   1e-07
AT4G13860.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) famil...    53   2e-07
AT2G37220.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) famil...    52   3e-07
AT1G34140.1 | Symbols: PAB1 | poly(A) binding protein 1 | chr1:1...    52   4e-07
AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRBP33 | 31-kDa RN...    52   5e-07
AT5G61030.1 | Symbols: GR-RBP3 | glycine-rich RNA-binding protei...    52   5e-07
AT2G18510.1 | Symbols: emb2444 | RNA-binding (RRM/RBD/RNP motifs...    51   6e-07
AT5G06210.1 | Symbols:  | RNA binding (RRM/RBD/RNP motifs) famil...    51   6e-07
AT3G46020.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) famil...    51   6e-07
AT2G37510.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) famil...    51   7e-07
AT5G47320.1 | Symbols: RPS19 | ribosomal protein S19 | chr5:1920...    50   1e-06
AT4G03110.1 | Symbols: AtRBP-DR1, RBP-DR1 | RNA-binding protein-...    50   1e-06
AT3G16380.1 | Symbols: PAB6 | poly(A) binding protein 6 | chr3:5...    50   2e-06
AT3G26420.1 | Symbols: ATRZ-1A | RNA-binding (RRM/RBD/RNP motifs...    49   2e-06
AT4G14300.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) famil...    49   2e-06
AT1G60650.2 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) famil...    49   2e-06
AT1G60650.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) famil...    49   2e-06
AT2G33410.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) famil...    49   3e-06
AT3G52150.2 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) famil...    49   3e-06
AT3G52150.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) famil...    49   3e-06
AT3G53460.3 | Symbols: CP29 | chloroplast RNA-binding protein 29...    48   6e-06
AT3G53460.2 | Symbols: CP29 | chloroplast RNA-binding protein 29...    48   6e-06
AT3G53460.1 | Symbols: CP29 | chloroplast RNA-binding protein 29...    48   6e-06
AT3G13224.2 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) famil...    48   6e-06
AT2G46780.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) famil...    48   7e-06
AT3G53460.4 | Symbols: CP29 | chloroplast RNA-binding protein 29...    48   7e-06
AT3G13224.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) famil...    47   7e-06

>AT3G04500.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) family
           protein | chr3:1212065-1213795 REVERSE LENGTH=245
          Length = 245

 Score =  293 bits (751), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 135/169 (79%), Positives = 155/169 (91%)

Query: 63  HQLFERDAQIITPEALESVKAAIARSDVEHKADTKKKAVPRKAAGQTWEDPVLAEWPEDD 122
           HQLF+RDAQ ITPEALE+VKAA+A S+ EHKA+TKK+A+PRKAAGQ+WEDP L+EWPE+D
Sbjct: 77  HQLFQRDAQTITPEALENVKAALASSETEHKAETKKRAIPRKAAGQSWEDPTLSEWPEND 136

Query: 123 YRLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALK 182
           YRLFCGDLGNEVNDDVLSKAF+RFP+FN+A+V+RDKRTGKTKGYGFVSF NPADLAAALK
Sbjct: 137 YRLFCGDLGNEVNDDVLSKAFARFPTFNMAKVIRDKRTGKTKGYGFVSFLNPADLAAALK 196

Query: 183 EMNGKYVGNRPIKLRKSKWKERTDYEALEKQKNQLHKKPKLPRKGVLHK 231
           EMNGKYVGNRPIKLRKS WKERTD EA E+QK+  +KK K  +K +LHK
Sbjct: 197 EMNGKYVGNRPIKLRKSSWKERTDQEAAERQKHHSNKKQKTVKKSILHK 245


>AT3G14100.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) family
           protein | chr3:4673027-4675950 FORWARD LENGTH=427
          Length = 427

 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 51/74 (68%)

Query: 123 YRLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALK 182
           + +F GDL  EV D  L ++FS F S + ARV+ D++TG+++G+GFVSF N  D   A+ 
Sbjct: 144 FNIFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIN 203

Query: 183 EMNGKYVGNRPIKL 196
           EMNGK++ +R I+ 
Sbjct: 204 EMNGKWLSSRQIRC 217


>AT1G54080.1 | Symbols: UBP1A | oligouridylate-binding protein 1A |
           chr1:20183923-20186824 REVERSE LENGTH=426
          Length = 426

 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 35/74 (47%), Positives = 50/74 (67%)

Query: 123 YRLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALK 182
           + +F GDL  EV D  L  +FS F S + ARV+ D++TG+++G+GFVSF N  D   A+ 
Sbjct: 148 FNIFVGDLSPEVTDAALFDSFSAFNSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIN 207

Query: 183 EMNGKYVGNRPIKL 196
           EMNGK+V +R I+ 
Sbjct: 208 EMNGKWVSSRQIRC 221


>AT1G17370.1 | Symbols: UBP1B | oligouridylate binding protein 1B |
           chr1:5951842-5954825 REVERSE LENGTH=419
          Length = 419

 Score = 74.7 bits (182), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 57/93 (61%), Gaps = 3/93 (3%)

Query: 123 YRLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALK 182
           + +F GDL  EV D +L   FS +P+ + ARV+ D++TG+++G+GFVSF N  D   A+ 
Sbjct: 139 FNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAID 198

Query: 183 EMNGKYVGNRPIKLRKSKWKERTDYEALEKQKN 215
           E+ GK++G+R I+     W  +      +KQ +
Sbjct: 199 EITGKWLGSRQIRC---NWATKGATSGEDKQSS 228


>AT1G17370.2 | Symbols: UBP1B | oligouridylate binding protein 1B |
           chr1:5951842-5954825 REVERSE LENGTH=416
          Length = 416

 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 57/93 (61%), Gaps = 3/93 (3%)

Query: 123 YRLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALK 182
           + +F GDL  EV D +L   FS +P+ + ARV+ D++TG+++G+GFVSF N  D   A+ 
Sbjct: 139 FNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAID 198

Query: 183 EMNGKYVGNRPIKLRKSKWKERTDYEALEKQKN 215
           E+ GK++G+R I+     W  +      +KQ +
Sbjct: 199 EITGKWLGSRQIRC---NWATKGATSGEDKQSS 228


>AT3G19130.1 | Symbols: ATRBP47B, RBP47B | RNA-binding protein 47B |
           chr3:6611398-6613823 REVERSE LENGTH=435
          Length = 435

 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 1/76 (1%)

Query: 122 DYRLFCGDLGNEVNDDVLSKAFS-RFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAA 180
           D  +F GDL  +V D +L + FS R+PS   A+VV D  TG++KGYGFV F +  + + A
Sbjct: 201 DLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRA 260

Query: 181 LKEMNGKYVGNRPIKL 196
           L EMNG Y  NR +++
Sbjct: 261 LTEMNGAYCSNRQMRV 276


>AT5G54900.1 | Symbols: ATRBP45A, RBP45A | RNA-binding protein 45A |
           chr5:22295412-22298126 FORWARD LENGTH=387
          Length = 387

 Score = 70.9 bits (172), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 1/76 (1%)

Query: 122 DYRLFCGDLGNEVNDDVLSKAFSR-FPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAA 180
           D+ +F GDL  EV D +LS  F   + S   A+VV D+ TG++KGYGFV FA+  +   A
Sbjct: 153 DHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRA 212

Query: 181 LKEMNGKYVGNRPIKL 196
           + EMNG+Y   RP+++
Sbjct: 213 MTEMNGQYCSTRPMRI 228


>AT1G54080.2 | Symbols: UBP1A | oligouridylate-binding protein 1A |
           chr1:20183923-20186824 REVERSE LENGTH=430
          Length = 430

 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 4/78 (5%)

Query: 123 YRLFCGDLGNEVNDDVLSKAFSRFPS----FNIARVVRDKRTGKTKGYGFVSFANPADLA 178
           + +F GDL  EV D  L  +FS F S    +  ARV+ D++TG+++G+GFVSF N  D  
Sbjct: 148 FNIFVGDLSPEVTDAALFDSFSAFNSCSSYYRDARVMWDQKTGRSRGFGFVSFRNQQDAQ 207

Query: 179 AALKEMNGKYVGNRPIKL 196
            A+ EMNGK+V +R I+ 
Sbjct: 208 TAINEMNGKWVSSRQIRC 225


>AT1G11650.1 | Symbols: ATRBP45B, RBP45B | RNA-binding (RRM/RBD/RNP
           motifs) family protein | chr1:3914895-3917301 FORWARD
           LENGTH=306
          Length = 306

 Score = 70.5 bits (171), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 57/94 (60%), Gaps = 6/94 (6%)

Query: 122 DYRLFCGDLGNEVNDDVLSKAF-SRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAA 180
           DY +F GDL  +V D +L + F + +PS   A+VV D+ TG+TKGYGFV F++ ++   A
Sbjct: 154 DYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRA 213

Query: 181 LKEMNGKYVGNRPIKL-----RKSKWKERTDYEA 209
           + EMNG     RP+++     +K    +R  Y++
Sbjct: 214 MTEMNGVPCSTRPMRIGPAASKKGVTGQRDSYQS 247



 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 1/82 (1%)

Query: 121 DDYR-LFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAA 179
           D+ R L+ GDL   ++++ L   F+       A+V+R+K+TG+ +GYGF+ FA+ A    
Sbjct: 59  DEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAER 118

Query: 180 ALKEMNGKYVGNRPIKLRKSKW 201
            L+  N   + + P +L +  W
Sbjct: 119 VLQTFNNAPIPSFPDQLFRLNW 140


>AT4G27000.1 | Symbols: ATRBP45C | RNA-binding (RRM/RBD/RNP motifs)
           family protein | chr4:13554983-13557763 REVERSE
           LENGTH=415
          Length = 415

 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 55/81 (67%), Gaps = 3/81 (3%)

Query: 116 AEWPEDDYRLFCGDLGNEVNDDVLSKAF-SRFPSFNIARVVRDKRTGKTKGYGFVSFANP 174
           AE PE  + +F GDL  +V D +L++ F + + S   A+VV D+ TG++KGYGFV FA+ 
Sbjct: 168 AEGPE--HTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFVRFADE 225

Query: 175 ADLAAALKEMNGKYVGNRPIK 195
           ++   A+ EMNG+Y  +RP++
Sbjct: 226 SEQIRAMTEMNGQYCSSRPMR 246


>AT1G11650.2 | Symbols: ATRBP45B, RBP45B | RNA-binding (RRM/RBD/RNP
           motifs) family protein | chr1:3914895-3917941 FORWARD
           LENGTH=405
          Length = 405

 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 57/94 (60%), Gaps = 6/94 (6%)

Query: 122 DYRLFCGDLGNEVNDDVLSKAF-SRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAA 180
           DY +F GDL  +V D +L + F + +PS   A+VV D+ TG+TKGYGFV F++ ++   A
Sbjct: 154 DYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRA 213

Query: 181 LKEMNGKYVGNRPIKL-----RKSKWKERTDYEA 209
           + EMNG     RP+++     +K    +R  Y++
Sbjct: 214 MTEMNGVPCSTRPMRIGPAASKKGVTGQRDSYQS 247



 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 43/77 (55%)

Query: 125 LFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKEM 184
           L+ GDL   ++++ L   F+       A+V+R+K+TG+ +GYGF+ FA+ A     L+  
Sbjct: 64  LWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAERVLQTF 123

Query: 185 NGKYVGNRPIKLRKSKW 201
           N   + + P +L +  W
Sbjct: 124 NNAPIPSFPDQLFRLNW 140


>AT5G19350.2 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) family
           protein | chr5:6518978-6521295 FORWARD LENGTH=421
          Length = 421

 Score = 67.8 bits (164), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 122 DYRLFCGDLGNEVNDDVLSKAF-SRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAA 180
           D+ +F GDL  +V D +L + F   + S   A+VV D  TG++KGYGFV FA  ++   A
Sbjct: 115 DHSIFVGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRA 174

Query: 181 LKEMNGKYVGNRPIKL 196
           + EMNG Y   RP+++
Sbjct: 175 MAEMNGLYCSTRPMRI 190


>AT5G19350.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) family
           protein | chr5:6518978-6521295 FORWARD LENGTH=425
          Length = 425

 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 122 DYRLFCGDLGNEVNDDVLSKAF-SRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAA 180
           D+ +F GDL  +V D +L + F   + S   A+VV D  TG++KGYGFV FA  ++   A
Sbjct: 115 DHSIFVGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRA 174

Query: 181 LKEMNGKYVGNRPIKL 196
           + EMNG Y   RP+++
Sbjct: 175 MAEMNGLYCSTRPMRI 190


>AT1G47490.2 | Symbols: ATRBP47C, RBP47C | RNA-binding protein 47C |
           chr1:17424801-17426114 FORWARD LENGTH=310
          Length = 310

 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 54/88 (61%), Gaps = 1/88 (1%)

Query: 122 DYRLFCGDLGNEVNDDVLSKAFS-RFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAA 180
           D  +F GDL  +V+D++L + FS ++PS   A+VV D  TG++KGYGFV F +  +   A
Sbjct: 196 DLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKA 255

Query: 181 LKEMNGKYVGNRPIKLRKSKWKERTDYE 208
           + EMNG    +R +++  +  ++   Y+
Sbjct: 256 MTEMNGVKCSSRAMRIGPATPRKTNGYQ 283


>AT1G49600.1 | Symbols: ATRBP47A, RBP47A | RNA-binding protein 47A |
           chr1:18357236-18360150 REVERSE LENGTH=445
          Length = 445

 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 58/96 (60%), Gaps = 7/96 (7%)

Query: 122 DYRLFCGDLGNEVNDDVLSKAFS-RFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAA 180
           D  +F GDL  +V+D VL + F+ R+PS   A+VV D  TG++KGYGFV F +  + + A
Sbjct: 212 DLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRA 271

Query: 181 LKEMNGKYVGNRPIKL------RKSKWKERTDYEAL 210
           + EMNG +  +R +++      R + + ++   +AL
Sbjct: 272 MTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQAL 307


>AT1G47490.1 | Symbols: ATRBP47C, RBP47C | RNA-binding protein 47C |
           chr1:17424801-17427182 FORWARD LENGTH=432
          Length = 432

 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 54/88 (61%), Gaps = 1/88 (1%)

Query: 122 DYRLFCGDLGNEVNDDVLSKAFS-RFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAA 180
           D  +F GDL  +V+D++L + FS ++PS   A+VV D  TG++KGYGFV F +  +   A
Sbjct: 196 DLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKA 255

Query: 181 LKEMNGKYVGNRPIKLRKSKWKERTDYE 208
           + EMNG    +R +++  +  ++   Y+
Sbjct: 256 MTEMNGVKCSSRAMRIGPATPRKTNGYQ 283


>AT1G47500.1 | Symbols: ATRBP47C', RBP47C' | RNA-binding protein
           47C' | chr1:17432682-17434805 FORWARD LENGTH=434
          Length = 434

 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 53/88 (60%), Gaps = 1/88 (1%)

Query: 122 DYRLFCGDLGNEVNDDVLSKAFS-RFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAA 180
           D  +F GDL  +V+D +L + FS ++PS   A+VV D  TG++KGYGFV F +  +   A
Sbjct: 198 DLSIFVGDLAPDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKA 257

Query: 181 LKEMNGKYVGNRPIKLRKSKWKERTDYE 208
           + EMNG    +R +++  +  ++   Y+
Sbjct: 258 MTEMNGVKCSSRAMRIGPATPRKTNGYQ 285


>AT4G39260.2 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold,
           circadian rhythm, and RNA binding 1 |
           chr4:18274166-18274958 REVERSE LENGTH=126
          Length = 126

 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 51/82 (62%)

Query: 119 PEDDYRLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLA 178
            E +YR F G L    ND+ L + FS+F     ++++ D+ +G+++G+GFV+F +   + 
Sbjct: 2   SEVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMR 61

Query: 179 AALKEMNGKYVGNRPIKLRKSK 200
            A++EMNGK +  R I + +++
Sbjct: 62  DAIEEMNGKELDGRVITVNEAQ 83


>AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold,
           circadian rhythm, and RNA binding 1 |
           chr4:18274166-18274958 REVERSE LENGTH=169
          Length = 169

 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 51/82 (62%)

Query: 119 PEDDYRLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLA 178
            E +YR F G L    ND+ L + FS+F     ++++ D+ +G+++G+GFV+F +   + 
Sbjct: 2   SEVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMR 61

Query: 179 AALKEMNGKYVGNRPIKLRKSK 200
            A++EMNGK +  R I + +++
Sbjct: 62  DAIEEMNGKELDGRVITVNEAQ 83


>AT3G23830.2 | Symbols: GR-RBP4, GRP4 | glycine-rich RNA-binding
           protein 4 | chr3:8606762-8607677 REVERSE LENGTH=136
          Length = 136

 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 3/103 (2%)

Query: 97  KKKAVPRKAAGQTWEDPVLAEWPEDDY---RLFCGDLGNEVNDDVLSKAFSRFPSFNIAR 153
           K   + R+   Q+   PV +      Y   +LF G L    +D  L +AF+ F     A 
Sbjct: 6   KLSGILRQGVSQSSNGPVTSMLGSLRYMSSKLFVGGLSWGTDDSSLKQAFTSFGEVTEAT 65

Query: 154 VVRDKRTGKTKGYGFVSFANPADLAAALKEMNGKYVGNRPIKL 196
           V+ D+ TG+++G+GFVSF+       A+KEM+GK +  R I++
Sbjct: 66  VIADRETGRSRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRV 108


>AT3G23830.1 | Symbols: GR-RBP4, GRP4 | glycine-rich RNA-binding
           protein 4 | chr3:8606762-8607677 REVERSE LENGTH=136
          Length = 136

 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 3/103 (2%)

Query: 97  KKKAVPRKAAGQTWEDPVLAEWPEDDY---RLFCGDLGNEVNDDVLSKAFSRFPSFNIAR 153
           K   + R+   Q+   PV +      Y   +LF G L    +D  L +AF+ F     A 
Sbjct: 6   KLSGILRQGVSQSSNGPVTSMLGSLRYMSSKLFVGGLSWGTDDSSLKQAFTSFGEVTEAT 65

Query: 154 VVRDKRTGKTKGYGFVSFANPADLAAALKEMNGKYVGNRPIKL 196
           V+ D+ TG+++G+GFVSF+       A+KEM+GK +  R I++
Sbjct: 66  VIADRETGRSRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRV 108


>AT4G39260.3 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold,
           circadian rhythm, and RNA binding 1 |
           chr4:18274166-18274958 REVERSE LENGTH=92
          Length = 92

 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 51/82 (62%)

Query: 119 PEDDYRLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLA 178
            E +YR F G L    ND+ L + FS+F     ++++ D+ +G+++G+GFV+F +   + 
Sbjct: 2   SEVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMR 61

Query: 179 AALKEMNGKYVGNRPIKLRKSK 200
            A++EMNGK +  R I + +++
Sbjct: 62  DAIEEMNGKELDGRVITVNEAQ 83


>AT1G58470.1 | Symbols: ATRBP1, RBP1 | RNA-binding protein 1 |
           chr1:21727374-21728539 FORWARD LENGTH=360
          Length = 360

 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 62/103 (60%), Gaps = 7/103 (6%)

Query: 121 DDYRLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAA 180
           D Y+LF G +  E +++ L + FSR+ +   A V ++K TGK +G+GFV FAN  D+  A
Sbjct: 4   DRYKLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFANDCDVVKA 63

Query: 181 LKEMNGKYVGNRPIKLRKS-----KWKERTDYEALEKQKNQLH 218
           L++ +  ++  +P+ +RK+      +++    + LE++  Q++
Sbjct: 64  LRDTH--FILGKPVDVRKAIRKHELYQQPFSMQFLERKVQQMN 104


>AT1G71770.2 | Symbols: PAB5 | poly(A)-binding protein 5 |
           chr1:26990777-26993489 REVERSE LENGTH=682
          Length = 682

 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 52/79 (65%), Gaps = 1/79 (1%)

Query: 125 LFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKEM 184
           L+  +L + VND+ L + FS + +    +V+ + + G ++G+GFV+++NP +   A+KEM
Sbjct: 344 LYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQ-GLSRGFGFVAYSNPEEALLAMKEM 402

Query: 185 NGKYVGNRPIKLRKSKWKE 203
           NGK +G +P+ +  ++ KE
Sbjct: 403 NGKMIGRKPLYVALAQRKE 421



 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 1/81 (1%)

Query: 125 LFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKEM 184
           L+ GDL   VN+  L   F++    +  RV RD  T ++ GY +V+FANP D + A++ +
Sbjct: 61  LYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRD-LTHRSLGYAYVNFANPEDASRAMESL 119

Query: 185 NGKYVGNRPIKLRKSKWKERT 205
           N   + +RPI++  S     T
Sbjct: 120 NYAPIRDRPIRIMLSNRDPST 140



 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 50/84 (59%), Gaps = 1/84 (1%)

Query: 125 LFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKEM 184
           ++  +L  E+ DD L K F ++   + A V++D+ +G ++ +GFV+F +P   A A+++M
Sbjct: 241 VYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQ-SGNSRSFGFVNFVSPEAAAVAVEKM 299

Query: 185 NGKYVGNRPIKLRKSKWKERTDYE 208
           NG  +G   + + +++ K   + E
Sbjct: 300 NGISLGEDVLYVGRAQKKSDREEE 323


>AT1G71770.1 | Symbols: PAB5 | poly(A)-binding protein 5 |
           chr1:26990777-26993489 REVERSE LENGTH=682
          Length = 682

 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 52/79 (65%), Gaps = 1/79 (1%)

Query: 125 LFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKEM 184
           L+  +L + VND+ L + FS + +    +V+ + + G ++G+GFV+++NP +   A+KEM
Sbjct: 344 LYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQ-GLSRGFGFVAYSNPEEALLAMKEM 402

Query: 185 NGKYVGNRPIKLRKSKWKE 203
           NGK +G +P+ +  ++ KE
Sbjct: 403 NGKMIGRKPLYVALAQRKE 421



 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 1/81 (1%)

Query: 125 LFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKEM 184
           L+ GDL   VN+  L   F++    +  RV RD  T ++ GY +V+FANP D + A++ +
Sbjct: 61  LYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRD-LTHRSLGYAYVNFANPEDASRAMESL 119

Query: 185 NGKYVGNRPIKLRKSKWKERT 205
           N   + +RPI++  S     T
Sbjct: 120 NYAPIRDRPIRIMLSNRDPST 140



 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 50/84 (59%), Gaps = 1/84 (1%)

Query: 125 LFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKEM 184
           ++  +L  E+ DD L K F ++   + A V++D+ +G ++ +GFV+F +P   A A+++M
Sbjct: 241 VYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQ-SGNSRSFGFVNFVSPEAAAVAVEKM 299

Query: 185 NGKYVGNRPIKLRKSKWKERTDYE 208
           NG  +G   + + +++ K   + E
Sbjct: 300 NGISLGEDVLYVGRAQKKSDREEE 323


>AT1G60000.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) family
           protein | chr1:22093678-22094540 REVERSE LENGTH=258
          Length = 258

 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 52/85 (61%)

Query: 118 WPEDDYRLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADL 177
           +PE +++LF G+L   V  + L+ AF        ARVV D  TG+++GYGFV +++ A++
Sbjct: 172 YPETEHKLFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVCYSSKAEM 231

Query: 178 AAALKEMNGKYVGNRPIKLRKSKWK 202
             AL+ ++G  +  R I++  ++ K
Sbjct: 232 ETALESLDGFELEGRAIRVNLAQGK 256


>AT5G04280.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) family
           protein with retrovirus zinc finger-like domain |
           chr5:1192461-1195413 FORWARD LENGTH=310
          Length = 310

 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 52/79 (65%)

Query: 124 RLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKE 183
           R+F G L  EV D  L +AFSRF      +++ ++ TG+++G+GF++FA+   +  +++E
Sbjct: 8   RIFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRAMDESIRE 67

Query: 184 MNGKYVGNRPIKLRKSKWK 202
           M+G+  G+R I + +++ K
Sbjct: 68  MHGRDFGDRVISVNRAEPK 86


>AT1G22760.1 | Symbols: PAB3 | poly(A) binding protein 3 |
           chr1:8055599-8058799 FORWARD LENGTH=660
          Length = 660

 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 57/91 (62%), Gaps = 3/91 (3%)

Query: 125 LFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKEM 184
           L+  +L + V+D+ L + FS + +   ++V+ + + G ++G+GFV+++NP +   AL EM
Sbjct: 334 LYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQ-GMSRGFGFVAYSNPEEALRALSEM 392

Query: 185 NGKYVGNRPIKLRKSKWKE--RTDYEALEKQ 213
           NGK +G +P+ +  ++ KE  R   +AL  Q
Sbjct: 393 NGKMIGRKPLYIALAQRKEDRRAHLQALFSQ 423


>AT2G23350.1 | Symbols: PAB4, PABP4 | poly(A) binding protein 4 |
           chr2:9943209-9946041 FORWARD LENGTH=662
          Length = 662

 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 50/83 (60%), Gaps = 1/83 (1%)

Query: 121 DDYRLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAA 180
           D   L+  +L + V D+ L + F+ F +    +V+RD  +G +KG GFV+F+  ++ +  
Sbjct: 326 DGLNLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDP-SGTSKGSGFVAFSAASEASRV 384

Query: 181 LKEMNGKYVGNRPIKLRKSKWKE 203
           L EMNGK VG +P+ +  ++ KE
Sbjct: 385 LNEMNGKMVGGKPLYVALAQRKE 407



 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 1/84 (1%)

Query: 125 LFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKEM 184
           ++  +L     DD L   F ++ S + A V+RD   GK++ +GFV+F NP D A A++ +
Sbjct: 227 VYVKNLSEATTDDELKTTFGQYGSISSAVVMRDG-DGKSRCFGFVNFENPEDAARAVEAL 285

Query: 185 NGKYVGNRPIKLRKSKWKERTDYE 208
           NGK   ++   + K++ K   + E
Sbjct: 286 NGKKFDDKEWYVGKAQKKSERELE 309


>AT4G34110.1 | Symbols: PAB2, PABP2, ATPAB2 | poly(A) binding
           protein 2 | chr4:16336732-16339892 FORWARD LENGTH=629
          Length = 629

 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 43/75 (57%)

Query: 125 LFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKEM 184
           L+ GDL   V D  L  AF +  +    RV RD  T ++ GYG+V+F NP D A A++E+
Sbjct: 38  LYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQEL 97

Query: 185 NGKYVGNRPIKLRKS 199
           N   +  +PI++  S
Sbjct: 98  NYIPLYGKPIRVMYS 112



 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 49/79 (62%), Gaps = 1/79 (1%)

Query: 125 LFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKEM 184
           L+  +L   ++D+ L + FS F +   ++V+RD   G +KG GFV+FA P +   A+ ++
Sbjct: 320 LYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDP-NGTSKGSGFVAFATPEEATEAMSQL 378

Query: 185 NGKYVGNRPIKLRKSKWKE 203
           +GK + ++P+ +  ++ KE
Sbjct: 379 SGKMIESKPLYVAIAQRKE 397


>AT3G52380.1 | Symbols: CP33, PDE322 | chloroplast RNA-binding
           protein 33 | chr3:19421619-19422855 FORWARD LENGTH=329
          Length = 329

 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 51/87 (58%)

Query: 118 WPEDDYRLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADL 177
           + +  ++++ G+LG  +    L  AF   P    A+V+ ++ TG+++G+GF+SF +  ++
Sbjct: 214 YVDSPHKVYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENV 273

Query: 178 AAALKEMNGKYVGNRPIKLRKSKWKER 204
            +AL  MNG  V  R ++L  +  +E+
Sbjct: 274 QSALATMNGVEVEGRALRLNLASEREK 300


>AT2G21660.2 | Symbols: ATGRP7, CCR2 | cold, circadian rhythm, and
           rna binding 2 | chr2:9265477-9266316 REVERSE LENGTH=159
          Length = 159

 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 48/79 (60%)

Query: 122 DYRLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAAL 181
           +YR F G L    +D  L  AF+++     ++++ D+ TG+++G+GFV+F +   +  A+
Sbjct: 7   EYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAI 66

Query: 182 KEMNGKYVGNRPIKLRKSK 200
           + MNG+ +  R I + +++
Sbjct: 67  EGMNGQDLDGRSITVNEAQ 85


>AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP7 | cold,
           circadian rhythm, and rna binding 2 |
           chr2:9265477-9266316 REVERSE LENGTH=176
          Length = 176

 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 48/79 (60%)

Query: 122 DYRLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAAL 181
           +YR F G L    +D  L  AF+++     ++++ D+ TG+++G+GFV+F +   +  A+
Sbjct: 7   EYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAI 66

Query: 182 KEMNGKYVGNRPIKLRKSK 200
           + MNG+ +  R I + +++
Sbjct: 67  EGMNGQDLDGRSITVNEAQ 85


>AT3G08000.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) family
           protein | chr3:2555034-2555829 REVERSE LENGTH=143
          Length = 143

 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 42/73 (57%)

Query: 124 RLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKE 183
           +LF G L   V++  L  AFS F      R+  DK +G+++G+GFV FA   D  +A   
Sbjct: 42  KLFIGGLSWSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDALSAKDA 101

Query: 184 MNGKYVGNRPIKL 196
           M+GK +  RP+++
Sbjct: 102 MDGKGLLGRPLRI 114


>AT4G39260.4 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold,
           circadian rhythm, and RNA binding 1 |
           chr4:18274166-18274958 REVERSE LENGTH=105
          Length = 105

 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 42/67 (62%)

Query: 119 PEDDYRLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLA 178
            E +YR F G L    ND+ L + FS+F     ++++ D+ +G+++G+GFV+F +   + 
Sbjct: 2   SEVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMR 61

Query: 179 AALKEMN 185
            A++EMN
Sbjct: 62  DAIEEMN 68


>AT1G49760.2 | Symbols: PAB8 | poly(A) binding protein 8 |
           chr1:18416740-18419753 FORWARD LENGTH=671
          Length = 671

 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 125 LFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKEM 184
           L+  +L   V DD L + F+ F +    +V+RD  +G ++G GFV+F+ P +   A+ EM
Sbjct: 329 LYVKNLDESVTDDKLREHFAPFGTITSCKVMRDP-SGVSRGSGFVAFSTPEEATRAITEM 387

Query: 185 NGKYVGNRPIKLRKSKWKE 203
           NGK +  +P+ +  ++ KE
Sbjct: 388 NGKMIVTKPLYVALAQRKE 406



 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 42/75 (56%)

Query: 125 LFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKEM 184
           L+ GDL   V D  L +AF++       RV RD  T ++ GYG+V++A P D + AL E+
Sbjct: 47  LYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALNEL 106

Query: 185 NGKYVGNRPIKLRKS 199
           N   +  R I++  S
Sbjct: 107 NFMALNGRAIRVMYS 121


>AT1G49760.1 | Symbols: PAB8, PABP8 | poly(A) binding protein 8 |
           chr1:18416740-18419753 FORWARD LENGTH=671
          Length = 671

 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 125 LFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKEM 184
           L+  +L   V DD L + F+ F +    +V+RD  +G ++G GFV+F+ P +   A+ EM
Sbjct: 329 LYVKNLDESVTDDKLREHFAPFGTITSCKVMRDP-SGVSRGSGFVAFSTPEEATRAITEM 387

Query: 185 NGKYVGNRPIKLRKSKWKE 203
           NGK +  +P+ +  ++ KE
Sbjct: 388 NGKMIVTKPLYVALAQRKE 406



 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 42/75 (56%)

Query: 125 LFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKEM 184
           L+ GDL   V D  L +AF++       RV RD  T ++ GYG+V++A P D + AL E+
Sbjct: 47  LYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALNEL 106

Query: 185 NGKYVGNRPIKLRKS 199
           N   +  R I++  S
Sbjct: 107 NFMALNGRAIRVMYS 121


>AT5G51300.3 | Symbols:  | splicing factor-related |
           chr5:20849881-20852295 REVERSE LENGTH=804
          Length = 804

 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 2/91 (2%)

Query: 107 GQTWEDPVLAEWPEDDYRLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGY 166
           G T   P   E+  D+  L+ G L   + DD L   FS F    +A+V++D+ TG +KGY
Sbjct: 466 GSTPTKPPSKEY--DETNLYIGFLPPMLEDDGLINLFSSFGEIVMAKVIKDRVTGLSKGY 523

Query: 167 GFVSFANPADLAAALKEMNGKYVGNRPIKLR 197
           GFV +A+      A++ MNG     R + +R
Sbjct: 524 GFVKYADVQMANTAVQAMNGYRFEGRTLAVR 554


>AT5G51300.2 | Symbols:  | splicing factor-related |
           chr5:20849881-20852295 REVERSE LENGTH=804
          Length = 804

 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 2/91 (2%)

Query: 107 GQTWEDPVLAEWPEDDYRLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGY 166
           G T   P   E+  D+  L+ G L   + DD L   FS F    +A+V++D+ TG +KGY
Sbjct: 466 GSTPTKPPSKEY--DETNLYIGFLPPMLEDDGLINLFSSFGEIVMAKVIKDRVTGLSKGY 523

Query: 167 GFVSFANPADLAAALKEMNGKYVGNRPIKLR 197
           GFV +A+      A++ MNG     R + +R
Sbjct: 524 GFVKYADVQMANTAVQAMNGYRFEGRTLAVR 554


>AT5G51300.1 | Symbols:  | splicing factor-related |
           chr5:20849881-20852295 REVERSE LENGTH=804
          Length = 804

 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 2/91 (2%)

Query: 107 GQTWEDPVLAEWPEDDYRLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGY 166
           G T   P   E+  D+  L+ G L   + DD L   FS F    +A+V++D+ TG +KGY
Sbjct: 466 GSTPTKPPSKEY--DETNLYIGFLPPMLEDDGLINLFSSFGEIVMAKVIKDRVTGLSKGY 523

Query: 167 GFVSFANPADLAAALKEMNGKYVGNRPIKLR 197
           GFV +A+      A++ MNG     R + +R
Sbjct: 524 GFVKYADVQMANTAVQAMNGYRFEGRTLAVR 554


>AT4G13850.3 | Symbols: ATGRP2 | glycine-rich RNA-binding protein 2
           | chr4:8021314-8022065 FORWARD LENGTH=144
          Length = 144

 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 44/73 (60%)

Query: 124 RLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKE 183
           +LF G L    +D  L  AF+ F     A+V+ D+ TG+++G+GFV+F +     AA+ E
Sbjct: 36  KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95

Query: 184 MNGKYVGNRPIKL 196
           M+GK +  R I++
Sbjct: 96  MDGKELNGRHIRV 108


>AT4G13850.2 | Symbols: ATGRP2 | glycine-rich RNA-binding protein 2
           | chr4:8021314-8022065 FORWARD LENGTH=153
          Length = 153

 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 44/73 (60%)

Query: 124 RLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKE 183
           +LF G L    +D  L  AF+ F     A+V+ D+ TG+++G+GFV+F +     AA+ E
Sbjct: 36  KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95

Query: 184 MNGKYVGNRPIKL 196
           M+GK +  R I++
Sbjct: 96  MDGKELNGRHIRV 108


>AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | glycine-rich
           RNA-binding protein 2 | chr4:8021314-8022065 FORWARD
           LENGTH=158
          Length = 158

 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 44/73 (60%)

Query: 124 RLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKE 183
           +LF G L    +D  L  AF+ F     A+V+ D+ TG+++G+GFV+F +     AA+ E
Sbjct: 36  KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95

Query: 184 MNGKYVGNRPIKL 196
           M+GK +  R I++
Sbjct: 96  MDGKELNGRHIRV 108


>AT4G13850.4 | Symbols: ATGRP2 | glycine-rich RNA-binding protein 2
           | chr4:8021314-8022065 FORWARD LENGTH=129
          Length = 129

 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 44/73 (60%)

Query: 124 RLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKE 183
           +LF G L    +D  L  AF+ F     A+V+ D+ TG+++G+GFV+F +     AA+ E
Sbjct: 36  KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95

Query: 184 MNGKYVGNRPIKL 196
           M+GK +  R I++
Sbjct: 96  MDGKELNGRHIRV 108


>AT5G50250.1 | Symbols: CP31B | chloroplast RNA-binding protein 31B
           | chr5:20452677-20453965 REVERSE LENGTH=289
          Length = 289

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 49/82 (59%)

Query: 123 YRLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALK 182
           +R++ G+L  +V+   L + FS       ARVV D+ TG+++G+GFV  +N  ++  A+ 
Sbjct: 207 FRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNVAIA 266

Query: 183 EMNGKYVGNRPIKLRKSKWKER 204
            ++G+ +  R IK+  ++ + R
Sbjct: 267 ALDGQNLEGRAIKVNVAEERTR 288


>AT4G13860.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) family
           protein | chr4:8022601-8023162 FORWARD LENGTH=87
          Length = 87

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 49/74 (66%)

Query: 124 RLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKE 183
           R++ G+L     DD+L +AFS + +   A V+RD+ T +++G+GFV++++ ++  AA+  
Sbjct: 4   RVYVGNLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAAVSG 63

Query: 184 MNGKYVGNRPIKLR 197
           M+GK +  R + ++
Sbjct: 64  MDGKELNGRRVSVK 77


>AT2G37220.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) family
           protein | chr2:15634980-15636331 REVERSE LENGTH=289
          Length = 289

 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 47/75 (62%)

Query: 122 DYRLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAAL 181
           D +LF G+L   V+   L++ F    +  +  V+ DK TG+++G+GFV+ ++ +++ AA 
Sbjct: 90  DLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAA 149

Query: 182 KEMNGKYVGNRPIKL 196
           ++ NG  +  RP+++
Sbjct: 150 QQFNGYELDGRPLRV 164



 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 47/77 (61%)

Query: 124 RLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKE 183
           R++ G+L   V+D  L   FS       ARV+ D+ +G++KG+GFV++ +  ++  A+K 
Sbjct: 205 RVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKS 264

Query: 184 MNGKYVGNRPIKLRKSK 200
           ++G  +  R I++ +++
Sbjct: 265 LDGADLDGRQIRVSEAE 281


>AT1G34140.1 | Symbols: PAB1 | poly(A) binding protein 1 |
           chr1:12433356-12434735 REVERSE LENGTH=407
          Length = 407

 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 1/80 (1%)

Query: 125 LFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKEM 184
           L+  +L + V++  L + FS F +    +V+     G +KG GFV F+   + + A+ +M
Sbjct: 225 LYVKNLDDSVDNTKLEELFSEFGTITSCKVMVHS-NGISKGVGFVEFSTSEEASKAMLKM 283

Query: 185 NGKYVGNRPIKLRKSKWKER 204
           NGK VGN+PI +  ++ KE+
Sbjct: 284 NGKMVGNKPIYVSLAQCKEQ 303


>AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRBP33 | 31-kDa RNA
           binding protein | chr4:12766223-12767952 REVERSE
           LENGTH=329
          Length = 329

 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 47/74 (63%)

Query: 123 YRLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALK 182
           +R++ G+L  +V++  L + FS       ARVV D+ TG+++G+GFV+ ++  +L  A+ 
Sbjct: 244 FRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAIS 303

Query: 183 EMNGKYVGNRPIKL 196
            ++G+ +  R I++
Sbjct: 304 ALDGQNLEGRAIRV 317



 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 51/86 (59%), Gaps = 2/86 (2%)

Query: 116 AEWPE--DDYRLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFAN 173
           AE+PE  ++ +LF G+L  +VN   L+  F +  +  IA V+ ++ T +++G+GFV+ ++
Sbjct: 141 AEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSS 200

Query: 174 PADLAAALKEMNGKYVGNRPIKLRKS 199
             +   A+++ N   +  R + + K+
Sbjct: 201 VDEAETAVEKFNRYDLNGRLLTVNKA 226


>AT5G61030.1 | Symbols: GR-RBP3 | glycine-rich RNA-binding protein 3
           | chr5:24560870-24562152 FORWARD LENGTH=309
          Length = 309

 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 48/73 (65%)

Query: 124 RLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKE 183
           +LF G +   +++D L +AF+++      RV+ D+ TG+++G+GFV+F +    ++A++ 
Sbjct: 41  KLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQA 100

Query: 184 MNGKYVGNRPIKL 196
           ++G+ +  R +K+
Sbjct: 101 LDGRDLHGRVVKV 113


>AT2G18510.1 | Symbols: emb2444 | RNA-binding (RRM/RBD/RNP motifs)
           family protein | chr2:8031554-8033517 REVERSE LENGTH=363
          Length = 363

 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 45/73 (61%), Gaps = 1/73 (1%)

Query: 125 LFCGDLGNEVNDDVLSKAFSRFPSF-NIARVVRDKRTGKTKGYGFVSFANPADLAAALKE 183
           LF G+L  +V++ +L   FS F    +  +++RD  TG ++G+GF+S+ +     AA++ 
Sbjct: 114 LFIGNLDPDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAAIES 173

Query: 184 MNGKYVGNRPIKL 196
           M G+Y+ NR I +
Sbjct: 174 MTGQYLSNRQITV 186


>AT5G06210.1 | Symbols:  | RNA binding (RRM/RBD/RNP motifs) family
           protein | chr5:1878497-1879515 FORWARD LENGTH=146
          Length = 146

 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 47/80 (58%)

Query: 124 RLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKE 183
           +LF G L     +  LS+AFS+      A++V D+ + ++KG+GFV+FA+  +   AL E
Sbjct: 35  KLFIGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASADEAQKALME 94

Query: 184 MNGKYVGNRPIKLRKSKWKE 203
            NG+ +  R I +  +K K+
Sbjct: 95  FNGQQLNGRTIFVDYAKAKQ 114


>AT3G46020.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) family
           protein | chr3:16912511-16913250 REVERSE LENGTH=102
          Length = 102

 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 42/80 (52%)

Query: 124 RLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKE 183
           +LF   L     D  L + FS F     AR++RD  T + KG+GF++F +  D   ALK 
Sbjct: 8   QLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFDSEDDARKALKS 67

Query: 184 MNGKYVGNRPIKLRKSKWKE 203
           ++GK V  R I +  +K  E
Sbjct: 68  LDGKIVDGRLIFVEVAKNAE 87


>AT2G37510.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) family
           protein | chr2:15743112-15744504 REVERSE LENGTH=142
          Length = 142

 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 38/66 (57%)

Query: 124 RLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKE 183
           RLF   L     ++ L  AF+ F     ARV+ D+ +G++KG+GFV++A   D   A  E
Sbjct: 35  RLFVSGLSRLTTNEKLQDAFASFGQLVDARVITDRDSGRSKGFGFVTYATIEDAEKAKAE 94

Query: 184 MNGKYV 189
           MN K++
Sbjct: 95  MNAKFL 100


>AT5G47320.1 | Symbols: RPS19 | ribosomal protein S19 |
           chr5:19203801-19204951 FORWARD LENGTH=212
          Length = 212

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 43/77 (55%)

Query: 124 RLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKE 183
           +L+ G L    ++  L  AFS F     ARV+ +K TG+++GYGFV+F +     +A+  
Sbjct: 32  KLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISA 91

Query: 184 MNGKYVGNRPIKLRKSK 200
           MNG+ +    I +  +K
Sbjct: 92  MNGQELNGFNISVNVAK 108


>AT4G03110.1 | Symbols: AtRBP-DR1, RBP-DR1 | RNA-binding
           protein-defense related 1 | chr4:1376612-1379275 REVERSE
           LENGTH=441
          Length = 441

 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 1/84 (1%)

Query: 114 VLAEWPEDDYRLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFAN 173
           V  E PE    LF  ++  E  D  L+ AF  F     A+V  DK TG +K +GFVS+ +
Sbjct: 341 VQTEGPEGA-NLFIYNIPREFGDQELAAAFQSFGIVLSAKVFVDKATGVSKCFGFVSYDS 399

Query: 174 PADLAAALKEMNGKYVGNRPIKLR 197
            A    A+  MNG+++G + +K++
Sbjct: 400 QAAAQNAIDMMNGRHLGGKKLKVQ 423


>AT3G16380.1 | Symbols: PAB6 | poly(A) binding protein 6 |
           chr3:5558676-5560993 REVERSE LENGTH=537
          Length = 537

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 55/104 (52%), Gaps = 1/104 (0%)

Query: 120 EDDYRLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAA 179
           +D   ++  +L   V DD L   FS++ + +   V+RD   G+++G+GFV+F NP +   
Sbjct: 199 QDSTNVYVKNLIETVTDDCLHTLFSQYGTVSSVVVMRDG-MGRSRGFGFVNFCNPENAKK 257

Query: 180 ALKEMNGKYVGNRPIKLRKSKWKERTDYEALEKQKNQLHKKPKL 223
           A++ + G  +G++ + + K+  K+       +K  +    KP +
Sbjct: 258 AMESLCGLQLGSKKLFVGKALKKDERREMLKQKFSDNFIAKPNM 301


>AT3G26420.1 | Symbols: ATRZ-1A | RNA-binding (RRM/RBD/RNP motifs)
           family protein with retrovirus zinc finger-like domain |
           chr3:9671953-9673055 FORWARD LENGTH=245
          Length = 245

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 2/86 (2%)

Query: 115 LAEWPEDDYRLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANP 174
           ++E PE  YR F G L    +D  L  AF ++     A+VV DK +G+++G+GF++F   
Sbjct: 1   MSEDPE--YRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEK 58

Query: 175 ADLAAALKEMNGKYVGNRPIKLRKSK 200
             +  A+  MNG  +  R I + K++
Sbjct: 59  KAMDEAIAAMNGMDLDGRTITVDKAQ 84


>AT4G14300.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) family
           protein | chr4:8231179-8232785 FORWARD LENGTH=411
          Length = 411

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 40/63 (63%)

Query: 121 DDYRLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAA 180
           D  +LF G +  E ++D L + F+ +   + A V+RDK TG+ +G+GFV F++P+ L   
Sbjct: 4   DQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRV 63

Query: 181 LKE 183
           L+E
Sbjct: 64  LQE 66


>AT1G60650.2 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) family
           protein with retrovirus zinc finger-like domain |
           chr1:22340089-22342148 FORWARD LENGTH=292
          Length = 292

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 44/77 (57%)

Query: 124 RLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKE 183
           R+F G L  +V +  L   F R+      +++  + TG+ +G+GF++F +      A+K 
Sbjct: 13  RIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGADDAIKH 72

Query: 184 MNGKYVGNRPIKLRKSK 200
           M+G+ +GN+ I + K++
Sbjct: 73  MHGRELGNKVISVNKAE 89


>AT1G60650.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) family
           protein with retrovirus zinc finger-like domain |
           chr1:22340089-22342148 FORWARD LENGTH=292
          Length = 292

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 44/77 (57%)

Query: 124 RLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKE 183
           R+F G L  +V +  L   F R+      +++  + TG+ +G+GF++F +      A+K 
Sbjct: 13  RIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGADDAIKH 72

Query: 184 MNGKYVGNRPIKLRKSK 200
           M+G+ +GN+ I + K++
Sbjct: 73  MHGRELGNKVISVNKAE 89


>AT2G33410.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) family
           protein | chr2:14156085-14157435 FORWARD LENGTH=404
          Length = 404

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 52/83 (62%), Gaps = 2/83 (2%)

Query: 121 DDYRLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAA 180
           D  +LF G +  + ++++L + FS F       V+R+K TG+ +G+GFV+F++PA +   
Sbjct: 4   DQGKLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVIDRV 63

Query: 181 LKEMNGKYVGNRPIKLRKSKWKE 203
           L++ +  ++ NR + ++++  +E
Sbjct: 64  LQDKH--HIDNRDVDVKRAMSRE 84


>AT3G52150.2 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) family
           protein | chr3:19342074-19343090 FORWARD LENGTH=253
          Length = 253

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 3/89 (3%)

Query: 111 EDPVLAEWPEDDYRLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVS 170
           ED    + P   Y+++ G+L   V  ++L   FS       A+V R   T K+ G+GFV+
Sbjct: 168 EDSAFVDSP---YKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVT 224

Query: 171 FANPADLAAALKEMNGKYVGNRPIKLRKS 199
           F++  D+ AA+  +N   +  + I++ K+
Sbjct: 225 FSSEEDVEAAIVALNNSLLEGQKIRVNKA 253


>AT3G52150.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) family
           protein | chr3:19342074-19343090 FORWARD LENGTH=253
          Length = 253

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 3/89 (3%)

Query: 111 EDPVLAEWPEDDYRLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVS 170
           ED    + P   Y+++ G+L   V  ++L   FS       A+V R   T K+ G+GFV+
Sbjct: 168 EDSAFVDSP---YKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVT 224

Query: 171 FANPADLAAALKEMNGKYVGNRPIKLRKS 199
           F++  D+ AA+  +N   +  + I++ K+
Sbjct: 225 FSSEEDVEAAIVALNNSLLEGQKIRVNKA 253


>AT3G53460.3 | Symbols: CP29 | chloroplast RNA-binding protein 29 |
           chr3:19819738-19821423 REVERSE LENGTH=342
          Length = 342

 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 47/79 (59%)

Query: 124 RLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKE 183
           RL+ G+L   V+D  L   F+       ARV+ D+ +G++KG+GFV+ ++  ++  A+  
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317

Query: 184 MNGKYVGNRPIKLRKSKWK 202
           +NG  +  R I++ +++ +
Sbjct: 318 LNGADLDGRQIRVSEAEAR 336


>AT3G53460.2 | Symbols: CP29 | chloroplast RNA-binding protein 29 |
           chr3:19819738-19821423 REVERSE LENGTH=342
          Length = 342

 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 47/79 (59%)

Query: 124 RLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKE 183
           RL+ G+L   V+D  L   F+       ARV+ D+ +G++KG+GFV+ ++  ++  A+  
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317

Query: 184 MNGKYVGNRPIKLRKSKWK 202
           +NG  +  R I++ +++ +
Sbjct: 318 LNGADLDGRQIRVSEAEAR 336


>AT3G53460.1 | Symbols: CP29 | chloroplast RNA-binding protein 29 |
           chr3:19819738-19821423 REVERSE LENGTH=342
          Length = 342

 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 47/79 (59%)

Query: 124 RLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKE 183
           RL+ G+L   V+D  L   F+       ARV+ D+ +G++KG+GFV+ ++  ++  A+  
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317

Query: 184 MNGKYVGNRPIKLRKSKWK 202
           +NG  +  R I++ +++ +
Sbjct: 318 LNGADLDGRQIRVSEAEAR 336


>AT3G13224.2 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) family
           protein | chr3:4254848-4256621 FORWARD LENGTH=358
          Length = 358

 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 43/69 (62%), Gaps = 3/69 (4%)

Query: 124 RLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKE 183
           ++F G L  +  + V +K F ++     + ++RD+ TG+ +G+GF++FA+P+ +   +++
Sbjct: 20  KIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVDKVIED 79

Query: 184 ---MNGKYV 189
              +NGK V
Sbjct: 80  THVINGKQV 88


>AT2G46780.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) family
           protein | chr2:19229516-19231043 FORWARD LENGTH=336
          Length = 336

 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 33/62 (53%)

Query: 124 RLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKE 183
           ++F G L  E   D + + F +F     A V+ DK TG++KGYGFV+F        A + 
Sbjct: 23  KIFVGGLAWETQRDTMRRYFEQFGEIVEAVVITDKNTGRSKGYGFVTFKEAEAAMRACQN 82

Query: 184 MN 185
           MN
Sbjct: 83  MN 84


>AT3G53460.4 | Symbols: CP29 | chloroplast RNA-binding protein 29 |
           chr3:19819738-19821423 REVERSE LENGTH=363
          Length = 363

 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 47/79 (59%)

Query: 124 RLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKE 183
           RL+ G+L   V+D  L   F+       ARV+ D+ +G++KG+GFV+ ++  ++  A+  
Sbjct: 279 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 338

Query: 184 MNGKYVGNRPIKLRKSKWK 202
           +NG  +  R I++ +++ +
Sbjct: 339 LNGADLDGRQIRVSEAEAR 357


>AT3G13224.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) family
           protein | chr3:4254848-4256014 FORWARD LENGTH=231
          Length = 231

 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 43/69 (62%), Gaps = 3/69 (4%)

Query: 124 RLFCGDLGNEVNDDVLSKAFSRFPSFNIARVVRDKRTGKTKGYGFVSFANPADLAAALKE 183
           ++F G L  +  + V +K F ++     + ++RD+ TG+ +G+GF++FA+P+ +   +++
Sbjct: 20  KIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVDKVIED 79

Query: 184 ---MNGKYV 189
              +NGK V
Sbjct: 80  THVINGKQV 88