Miyakogusa Predicted Gene

Lj5g3v1353010.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1353010.1 Non Chatacterized Hit- tr|F6H618|F6H618_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,76.14,0,DUF640,Domain of unknown function DUF640; seg,NULL; FAMILY
NOT NAMED,NULL,CUFF.55178.1
         (186 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G31160.1 | Symbols: LSH3 | Protein of unknown function (DUF64...   209   9e-55
AT3G04510.1 | Symbols: LSH2 | Protein of unknown function (DUF64...   209   1e-54
AT5G28490.1 | Symbols: LSH1 | Protein of unknown function (DUF64...   208   2e-54
AT3G23290.2 | Symbols: LSH4 | Protein of unknown function (DUF64...   198   2e-51
AT1G07090.1 | Symbols: LSH6 | Protein of unknown function (DUF64...   197   5e-51
AT5G58500.1 | Symbols: LSH5 | Protein of unknown function (DUF64...   181   3e-46
AT2G42610.2 | Symbols: LSH10 | Protein of unknown function (DUF6...   170   4e-43
AT2G42610.1 | Symbols: LSH10 | Protein of unknown function (DUF6...   170   4e-43
AT1G78815.1 | Symbols: LSH7 | Protein of unknown function (DUF64...   169   1e-42
AT1G16910.1 | Symbols: LSH8 | Protein of unknown function (DUF64...   148   2e-36
AT4G18610.1 | Symbols: LSH9 | Protein of unknown function (DUF64...   147   3e-36

>AT2G31160.1 | Symbols: LSH3 | Protein of unknown function (DUF640)
           | chr2:13277903-13278562 FORWARD LENGTH=219
          Length = 219

 Score =  209 bits (532), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 103/134 (76%), Positives = 109/134 (81%), Gaps = 1/134 (0%)

Query: 42  RYENQKRRDWNTFCQYLRNHRPPLSLSLCSGAHVLEFLHYLDQFGKTKVHNHXXXXXXXX 101
           RYENQKRRDWNTF QYLRNHRPPLSLS CSGAHVLEFL YLDQFGKTKVH +        
Sbjct: 54  RYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTNICHFYGHP 113

Query: 102 XXXXXXXXXXRQAWGSLDALIGRLRAAYEENGGRPETNPFGARAVRIYLRDVRDFQTKAR 161
                     RQAWGSLDALIGRLRAA+EENGG+PETNPFGARAVR+YLR+VRD Q+KAR
Sbjct: 114 NPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPETNPFGARAVRLYLREVRDMQSKAR 173

Query: 162 GVSYE-KKRKRPKP 174
           GVSYE KKRKRP P
Sbjct: 174 GVSYEKKKRKRPLP 187


>AT3G04510.1 | Symbols: LSH2 | Protein of unknown function (DUF640)
           | chr3:1215812-1216417 REVERSE LENGTH=201
          Length = 201

 Score =  209 bits (531), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 100/137 (72%), Positives = 109/137 (79%)

Query: 42  RYENQKRRDWNTFCQYLRNHRPPLSLSLCSGAHVLEFLHYLDQFGKTKVHNHXXXXXXXX 101
           RYENQKRRDWNTFCQYLRNH PPLSL+ CSGAHVL+FL YLDQFGKTKVH+         
Sbjct: 33  RYENQKRRDWNTFCQYLRNHHPPLSLASCSGAHVLDFLRYLDQFGKTKVHHQNCAFFGLP 92

Query: 102 XXXXXXXXXXRQAWGSLDALIGRLRAAYEENGGRPETNPFGARAVRIYLRDVRDFQTKAR 161
                     RQAWGSLDALIGRLRAAYEENGG PET+PFG+R+VRI+LR+VRDFQ K+R
Sbjct: 93  NPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGAPETSPFGSRSVRIFLREVRDFQAKSR 152

Query: 162 GVSYEKKRKRPKPKMIT 178
           GVSYEKKRKR   K IT
Sbjct: 153 GVSYEKKRKRVNNKQIT 169


>AT5G28490.1 | Symbols: LSH1 | Protein of unknown function (DUF640)
           | chr5:10454541-10455113 REVERSE LENGTH=190
          Length = 190

 Score =  208 bits (530), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 100/130 (76%), Positives = 105/130 (80%)

Query: 42  RYENQKRRDWNTFCQYLRNHRPPLSLSLCSGAHVLEFLHYLDQFGKTKVHNHXXXXXXXX 101
           RYENQKRRDWNTFCQYLRNHRPPLSL  CSGAHVLEFL YLDQFGKTKVH+         
Sbjct: 25  RYENQKRRDWNTFCQYLRNHRPPLSLPSCSGAHVLEFLRYLDQFGKTKVHHQNCAFFGLP 84

Query: 102 XXXXXXXXXXRQAWGSLDALIGRLRAAYEENGGRPETNPFGARAVRIYLRDVRDFQTKAR 161
                     RQAWGSLDALIGRLRAAYEENGG PE NPFG+RAVR++LR+VRDFQ KAR
Sbjct: 85  NPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGPPEANPFGSRAVRLFLREVRDFQAKAR 144

Query: 162 GVSYEKKRKR 171
           GVSYEKKRKR
Sbjct: 145 GVSYEKKRKR 154


>AT3G23290.2 | Symbols: LSH4 | Protein of unknown function (DUF640)
           | chr3:8326958-8328010 FORWARD LENGTH=195
          Length = 195

 Score =  198 bits (503), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 96/125 (76%), Positives = 100/125 (80%)

Query: 42  RYENQKRRDWNTFCQYLRNHRPPLSLSLCSGAHVLEFLHYLDQFGKTKVHNHXXXXXXXX 101
           RYENQKRRDWNTF QYLRNHRPPLSLS CSGAHVLEFL YLDQFGKTKVH H        
Sbjct: 48  RYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTHLCPFFGHP 107

Query: 102 XXXXXXXXXXRQAWGSLDALIGRLRAAYEENGGRPETNPFGARAVRIYLRDVRDFQTKAR 161
                     RQAWGSLDALIGRLRAA+EENGG PETNPFGARAVR+YLR+VRD Q KAR
Sbjct: 108 NPPAPCACPLRQAWGSLDALIGRLRAAFEENGGSPETNPFGARAVRLYLREVRDSQAKAR 167

Query: 162 GVSYE 166
           G+SYE
Sbjct: 168 GISYE 172


>AT1G07090.1 | Symbols: LSH6 | Protein of unknown function (DUF640)
           | chr1:2174202-2174792 REVERSE LENGTH=196
          Length = 196

 Score =  197 bits (500), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 93/145 (64%), Positives = 109/145 (75%)

Query: 42  RYENQKRRDWNTFCQYLRNHRPPLSLSLCSGAHVLEFLHYLDQFGKTKVHNHXXXXXXXX 101
           RYE+QKRRDWNTF QYL+NH+PPL+LS CSGAHV+EFL YLDQFGKTKVH          
Sbjct: 31  RYESQKRRDWNTFLQYLKNHKPPLALSRCSGAHVIEFLKYLDQFGKTKVHVAACPYFGHQ 90

Query: 102 XXXXXXXXXXRQAWGSLDALIGRLRAAYEENGGRPETNPFGARAVRIYLRDVRDFQTKAR 161
                     +QAWGSLDALIGRLRAAYEENGGRP++NPF ARAVRIYLR+VR+ Q KAR
Sbjct: 91  QPPSPCSCPLKQAWGSLDALIGRLRAAYEENGGRPDSNPFAARAVRIYLREVRESQAKAR 150

Query: 162 GVSYEKKRKRPKPKMITTTAATAST 186
           G+ YEKK+++  P + T     AS+
Sbjct: 151 GIPYEKKKRKRPPTVTTVRVDVASS 175


>AT5G58500.1 | Symbols: LSH5 | Protein of unknown function (DUF640)
           | chr5:23645535-23646083 REVERSE LENGTH=182
          Length = 182

 Score =  181 bits (459), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 92/143 (64%), Positives = 103/143 (72%), Gaps = 2/143 (1%)

Query: 42  RYENQKRRDWNTFCQYLRNHRPPLSLSLCSGAHVLEFLHYLDQFGKTKVHNHXXXXXXXX 101
           RYE+QKRRDWNTF QYLRNH+PPL+LS CSGAHVLEFL YLDQFGKTKVH          
Sbjct: 19  RYESQKRRDWNTFLQYLRNHKPPLNLSRCSGAHVLEFLKYLDQFGKTKVHATACPFFGQP 78

Query: 102 XXXXXXXXXXRQAWGSLDALIGRLRAAYEE-NGGRPETNPFGARAVRIYLRDVRDFQTKA 160
                     +QAWGSLDALIGRLRAA+EE  GG PE+NPF A+AVRIYL++VR  Q KA
Sbjct: 79  NPPSQCTCPLKQAWGSLDALIGRLRAAFEEIGGGLPESNPFAAKAVRIYLKEVRQTQAKA 138

Query: 161 RGVSYE-KKRKRPKPKMITTTAA 182
           RG+ Y+ KKRKRP     T  A 
Sbjct: 139 RGIPYDKKKRKRPHTDTATPIAG 161


>AT2G42610.2 | Symbols: LSH10 | Protein of unknown function (DUF640)
           | chr2:17748005-17748538 FORWARD LENGTH=177
          Length = 177

 Score =  170 bits (431), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 86/136 (63%), Positives = 101/136 (74%), Gaps = 1/136 (0%)

Query: 42  RYENQKRRDWNTFCQYLRNHRPPLSLSLCSGAHVLEFLHYLDQFGKTKVHNHXXXXXXXX 101
           RYE+QKRRDWNTF QYL+N RPP+ +S CS  HVL+FL YLDQFGKTKVH          
Sbjct: 25  RYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLDQFGKTKVHVPGCMFYGQP 84

Query: 102 XXXXXXXXXXRQAWGSLDALIGRLRAAYEENGGRPETNPFGARAVRIYLRDVRDFQTKAR 161
                     RQAWGSLDALIGRLRAAYEENGG PETNPF + A+R+YLR+VR+ Q KAR
Sbjct: 85  EPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPPETNPFASGAIRVYLREVRECQAKAR 144

Query: 162 GVSY-EKKRKRPKPKM 176
           G+ Y +KK+K+P P+M
Sbjct: 145 GIPYKKKKKKKPTPEM 160


>AT2G42610.1 | Symbols: LSH10 | Protein of unknown function (DUF640)
           | chr2:17748005-17748538 FORWARD LENGTH=177
          Length = 177

 Score =  170 bits (431), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 86/136 (63%), Positives = 101/136 (74%), Gaps = 1/136 (0%)

Query: 42  RYENQKRRDWNTFCQYLRNHRPPLSLSLCSGAHVLEFLHYLDQFGKTKVHNHXXXXXXXX 101
           RYE+QKRRDWNTF QYL+N RPP+ +S CS  HVL+FL YLDQFGKTKVH          
Sbjct: 25  RYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLDQFGKTKVHVPGCMFYGQP 84

Query: 102 XXXXXXXXXXRQAWGSLDALIGRLRAAYEENGGRPETNPFGARAVRIYLRDVRDFQTKAR 161
                     RQAWGSLDALIGRLRAAYEENGG PETNPF + A+R+YLR+VR+ Q KAR
Sbjct: 85  EPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPPETNPFASGAIRVYLREVRECQAKAR 144

Query: 162 GVSY-EKKRKRPKPKM 176
           G+ Y +KK+K+P P+M
Sbjct: 145 GIPYKKKKKKKPTPEM 160


>AT1G78815.1 | Symbols: LSH7 | Protein of unknown function (DUF640)
           | chr1:29632054-29632641 REVERSE LENGTH=195
          Length = 195

 Score =  169 bits (427), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 77/124 (62%), Positives = 89/124 (71%)

Query: 42  RYENQKRRDWNTFCQYLRNHRPPLSLSLCSGAHVLEFLHYLDQFGKTKVHNHXXXXXXXX 101
           RYE+QKRRDWNTFCQYLRN +PP+ +S C   H+L+FL YLDQFGKTKVH H        
Sbjct: 40  RYESQKRRDWNTFCQYLRNQQPPVHISQCGSNHILDFLQYLDQFGKTKVHIHGCVFFGQV 99

Query: 102 XXXXXXXXXXRQAWGSLDALIGRLRAAYEENGGRPETNPFGARAVRIYLRDVRDFQTKAR 161
                     +QAWGSLDALIGRLRAA+EENGG PE NPF    +R++LR+VRD Q KAR
Sbjct: 100 EPAGQCNCPLKQAWGSLDALIGRLRAAFEENGGLPERNPFAGGGIRVFLREVRDSQAKAR 159

Query: 162 GVSY 165
           GV Y
Sbjct: 160 GVPY 163


>AT1G16910.1 | Symbols: LSH8 | Protein of unknown function (DUF640)
           | chr1:5785373-5785867 FORWARD LENGTH=164
          Length = 164

 Score =  148 bits (374), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/145 (51%), Positives = 90/145 (62%), Gaps = 5/145 (3%)

Query: 42  RYENQKRRDWNTFCQYLRNHRPPLSLSLCSGAHVLEFLHYLDQFGKTKVHNHXXXXXXXX 101
           RYE+QK RDWNTFCQYL    PP+ +  C   H+L+FL   DQFGKTKVH          
Sbjct: 23  RYESQKSRDWNTFCQYLMTKMPPVHVWECESNHILDFLQSRDQFGKTKVHIQGCVFFGQK 82

Query: 102 XXXXXXXXXXRQAWGSLDALIGRLRAAYEENGGRPETNPFGARAVRIYLRDVRDFQTKAR 161
                     +QAWGSLDALIGRLRAAYEENGG  E NPF    +RI+LR+VR  Q KAR
Sbjct: 83  EPPGECNCPLKQAWGSLDALIGRLRAAYEENGGLTEKNPFARGGIRIFLREVRGSQAKAR 142

Query: 162 GVSYEKKRKRPKPKMITTTAATAST 186
           GV Y+KK+     +++     T++T
Sbjct: 143 GVLYKKKK-----RLVVVGTGTSTT 162


>AT4G18610.1 | Symbols: LSH9 | Protein of unknown function (DUF640)
           | chr4:10250794-10251369 FORWARD LENGTH=191
          Length = 191

 Score =  147 bits (372), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 72/125 (57%), Positives = 87/125 (69%), Gaps = 1/125 (0%)

Query: 42  RYENQKRRDWNTFCQYLRNHRPPLSLSLCSGAHVLEFLHYLDQFGKTKVHNHXXXXXXXX 101
           RYE+QKRRDWNTF QYL++  PPL +S     HVL FL YLDQFGKTKVH+         
Sbjct: 37  RYESQKRRDWNTFVQYLKSQNPPLMMSQFDYTHVLSFLRYLDQFGKTKVHHQACVFFGQP 96

Query: 102 XXXXXXXXXXRQAWGSLDALIGRLRAAYEEN-GGRPETNPFGARAVRIYLRDVRDFQTKA 160
                     +QAWGSLDALIGRLRAAYEE+ GG P+TNPF   ++R++LR+VR+ Q KA
Sbjct: 97  DPPGPCTCPLKQAWGSLDALIGRLRAAYEEHGGGSPDTNPFANGSIRVHLREVRESQAKA 156

Query: 161 RGVSY 165
           RG+ Y
Sbjct: 157 RGIPY 161