Miyakogusa Predicted Gene

Lj5g3v1326710.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1326710.1 Non Chatacterized Hit- tr|I3S7X8|I3S7X8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.78,0,DUF106,Protein of unknown function DUF106, transmembrane;
UNCHARACTERIZED,Uncharacterised conserved ,CUFF.55523.1
         (246 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G12590.1 | Symbols:  | Protein of unknown function DUF106, tr...   454   e-128

>AT4G12590.1 | Symbols:  | Protein of unknown function DUF106,
           transmembrane | chr4:7451291-7452976 REVERSE LENGTH=246
          Length = 246

 Score =  454 bits (1167), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 216/245 (88%), Positives = 231/245 (94%)

Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSQTPDAKIVKEGQVILRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIG+LRYFVSKLMRS+ TPDAK+VKEGQV++RARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSTPTPDAKMVKEGQVVIRARNL 60

Query: 61  RTGANFIPSKAFRARKVYYCNEEKGLLFVPKGQAQNPQAQMFSDPNMAMDMMKKNLSMII 120
           + GANFIP K+FRAR+ Y+ NEE GLL VPKG+AQNPQA MFSDPNMAMDMMKKNLSMII
Sbjct: 61  KVGANFIPPKSFRARRFYFSNEENGLLHVPKGEAQNPQAAMFSDPNMAMDMMKKNLSMII 120

Query: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 181 RGLFSLILGEENAVDDTQRMMQMGGFGFDPSKGLSAEKDNLDITQHEWALPNFEQRAEAV 240
           RGLFSLILG+ENA+DDTQRMMQMGGFGFD SK L AEKD LDI QHEWALP FEQRAE+V
Sbjct: 181 RGLFSLILGDENAIDDTQRMMQMGGFGFDASKSLGAEKDGLDIIQHEWALPRFEQRAESV 240

Query: 241 LKKLI 245
           L+KL+
Sbjct: 241 LRKLV 245