Miyakogusa Predicted Gene

Lj5g3v1314630.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1314630.1 Non Chatacterized Hit- tr|I3T8S7|I3T8S7_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2 SV,85.15,0,NATURAL
RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN (NRAMP) (MANGANESE
TRANSPORTER),NULL; MANGANESE TRA,gene.g61577.t1.1
         (280 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G23150.1 | Symbols: NRAMP3, ATNRAMP3 | natural resistance-ass...   335   2e-92
AT1G47240.1 | Symbols: NRAMP2, ATNRAMP2 | NRAMP metal ion transp...   330   8e-91
AT5G67330.1 | Symbols: ATNRAMP4, NRAMP4 | natural resistance ass...   324   5e-89
AT4G18790.1 | Symbols: NRAMP5, ATNRAMP5 | NRAMP metal ion transp...   300   9e-82
AT1G80830.1 | Symbols: NRAMP1, PMIT1, ATNRAMP1 | natural resista...   144   8e-35
AT1G15960.1 | Symbols: NRAMP6, ATNRAMP6 | NRAMP metal ion transp...   144   1e-34

>AT2G23150.1 | Symbols: NRAMP3, ATNRAMP3 | natural
           resistance-associated macrophage protein 3 |
           chr2:9856422-9858565 REVERSE LENGTH=509
          Length = 509

 Score =  335 bits (859), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 158/201 (78%), Positives = 185/201 (92%)

Query: 28  IFVPKLSSRTIQQAVGVVGCLIMPYNLFLHSALVQSRKIDHTNKGRVQEALNYYSIQSTL 87
           I VPKLSSRTIQ+AVGVVGC+IMP+N+FLHSALVQSR++D   K RVQEALNYY+I+ST+
Sbjct: 226 ILVPKLSSRTIQKAVGVVGCIIMPHNVFLHSALVQSREVDKRQKYRVQEALNYYTIESTI 285

Query: 88  ALLVSFVINIFVTSVFAKGFYGSKIANNIGLANAGQYLQEVYGSGVFPILFIWGIGLLAA 147
           AL +SF+IN+FVT+VFAKGFY + +AN+IGL NAGQYLQE YG GVFPIL+IW IGLLAA
Sbjct: 286 ALFISFLINLFVTTVFAKGFYNTDLANSIGLVNAGQYLQEKYGGGVFPILYIWAIGLLAA 345

Query: 148 GQSSTITGTYAGQFIMGGFLNLRIKKWMRALITRSCAIIPTMAVALIFDSSKQSLDVLSG 207
           GQSSTITGTYAGQFIMGGFLN ++KKW+RALITRSCAIIPT+ VAL+FDSS+ +LDVL+ 
Sbjct: 346 GQSSTITGTYAGQFIMGGFLNFKMKKWLRALITRSCAIIPTIIVALVFDSSEATLDVLNE 405

Query: 208 WLNVIQSVQIPFALIPLLCLV 228
           WLNV+QS+QIPFALIPLLCLV
Sbjct: 406 WLNVLQSIQIPFALIPLLCLV 426


>AT1G47240.1 | Symbols: NRAMP2, ATNRAMP2 | NRAMP metal ion
           transporter 2 | chr1:17309043-17311308 REVERSE
           LENGTH=530
          Length = 530

 Score =  330 bits (845), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 155/201 (77%), Positives = 185/201 (92%)

Query: 28  IFVPKLSSRTIQQAVGVVGCLIMPYNLFLHSALVQSRKIDHTNKGRVQEALNYYSIQSTL 87
           I +P+LSS+TI+QAVGVVGC+IMP+N+FLHSALVQSRKID   K RVQEALNYY I+S++
Sbjct: 238 ILLPRLSSKTIRQAVGVVGCVIMPHNVFLHSALVQSRKIDPKRKSRVQEALNYYLIESSV 297

Query: 88  ALLVSFVINIFVTSVFAKGFYGSKIANNIGLANAGQYLQEVYGSGVFPILFIWGIGLLAA 147
           AL +SF+IN+FVT+VFAKGFYG++ ANNIGL NAGQYLQE +G G+ PIL+IWGIGLLAA
Sbjct: 298 ALFISFMINLFVTTVFAKGFYGTEKANNIGLVNAGQYLQEKFGGGLLPILYIWGIGLLAA 357

Query: 148 GQSSTITGTYAGQFIMGGFLNLRIKKWMRALITRSCAIIPTMAVALIFDSSKQSLDVLSG 207
           GQSSTITGTYAGQFIMGGFLNLR+KKWMRA+ITRSCAI+PTM VA++F++S+ SLDVL+ 
Sbjct: 358 GQSSTITGTYAGQFIMGGFLNLRLKKWMRAVITRSCAIVPTMIVAIVFNTSEASLDVLNE 417

Query: 208 WLNVIQSVQIPFALIPLLCLV 228
           WLNV+QSVQIPFAL+PLL LV
Sbjct: 418 WLNVLQSVQIPFALLPLLTLV 438


>AT5G67330.1 | Symbols: ATNRAMP4, NRAMP4 | natural resistance
           associated macrophage protein 4 | chr5:26861822-26863580
           FORWARD LENGTH=512
          Length = 512

 Score =  324 bits (830), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 154/200 (77%), Positives = 180/200 (90%)

Query: 29  FVPKLSSRTIQQAVGVVGCLIMPYNLFLHSALVQSRKIDHTNKGRVQEALNYYSIQSTLA 88
            VPKLSSRTI+QAVG+VGC+IMP+N+FLHSALVQSR++D   + RV+EAL YYSI+ST A
Sbjct: 223 LVPKLSSRTIKQAVGIVGCIIMPHNVFLHSALVQSREVDPKKRFRVKEALKYYSIESTGA 282

Query: 89  LLVSFVINIFVTSVFAKGFYGSKIANNIGLANAGQYLQEVYGSGVFPILFIWGIGLLAAG 148
           L VSF+IN+FVT+VFAK FYG++IA+ IGLANAGQYLQ+ YG G FPIL+IW IG+LAAG
Sbjct: 283 LAVSFIINVFVTTVFAKSFYGTEIADTIGLANAGQYLQDKYGGGFFPILYIWAIGVLAAG 342

Query: 149 QSSTITGTYAGQFIMGGFLNLRIKKWMRALITRSCAIIPTMAVALIFDSSKQSLDVLSGW 208
           QSSTITGTYAGQFIMGGFLNL++KKW+RALITRSCAIIPTM VAL+FDSS   LD L+ W
Sbjct: 343 QSSTITGTYAGQFIMGGFLNLKMKKWVRALITRSCAIIPTMIVALVFDSSDSMLDELNEW 402

Query: 209 LNVIQSVQIPFALIPLLCLV 228
           LNV+QSVQIPFA+IPLLCLV
Sbjct: 403 LNVLQSVQIPFAVIPLLCLV 422


>AT4G18790.1 | Symbols: NRAMP5, ATNRAMP5 | NRAMP metal ion
           transporter family protein | chr4:10317785-10319660
           REVERSE LENGTH=530
          Length = 530

 Score =  300 bits (767), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 142/201 (70%), Positives = 177/201 (88%)

Query: 28  IFVPKLSSRTIQQAVGVVGCLIMPYNLFLHSALVQSRKIDHTNKGRVQEALNYYSIQSTL 87
           I +PKL S+TI++AVGVVGC+I P+N+FLHSALVQSRK D     RVQEALNYY+I+S+ 
Sbjct: 240 IIIPKLGSKTIREAVGVVGCVITPHNVFLHSALVQSRKTDPKEINRVQEALNYYTIESSA 299

Query: 88  ALLVSFVINIFVTSVFAKGFYGSKIANNIGLANAGQYLQEVYGSGVFPILFIWGIGLLAA 147
           AL VSF+IN+FVT+VFAKGFYG+K A++IGL NAG YLQE YG GVFPIL+IWGIGLLAA
Sbjct: 300 ALFVSFMINLFVTAVFAKGFYGTKQADSIGLVNAGYYLQEKYGGGVFPILYIWGIGLLAA 359

Query: 148 GQSSTITGTYAGQFIMGGFLNLRIKKWMRALITRSCAIIPTMAVALIFDSSKQSLDVLSG 207
           GQSSTITGTYAGQFIM GFL+L++++W+ A ITRS AI+PTM VA++F++S+ SLDVL+ 
Sbjct: 360 GQSSTITGTYAGQFIMEGFLDLQMEQWLSAFITRSFAIVPTMFVAIMFNTSEGSLDVLNE 419

Query: 208 WLNVIQSVQIPFALIPLLCLV 228
           WLN++QS+QIPFA+IPLL +V
Sbjct: 420 WLNILQSMQIPFAVIPLLTMV 440


>AT1G80830.1 | Symbols: NRAMP1, PMIT1, ATNRAMP1 | natural
           resistance-associated macrophage protein 1 |
           chr1:30373066-30375644 REVERSE LENGTH=532
          Length = 532

 Score =  144 bits (362), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 91/206 (44%), Positives = 131/206 (63%), Gaps = 14/206 (6%)

Query: 28  IFVPKLSSR-TIQQAVGVVGCLIMPYNLFLHSALVQSRKIDHTNKGRVQEALNYYSIQST 86
           +FVP+L        A+ ++G ++MP+NLFLHSALV SRKI  +  G ++EA  +Y I+S 
Sbjct: 214 LFVPQLKGNGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSASG-IKEACRFYLIESG 272

Query: 87  LALLVSFVINIFVTSVF-----AKGFYGSKIAN--NIGLANAGQYLQEVYGSGVFPILFI 139
           LAL+V+F+IN+ V SV      A        AN  ++ L  A   L+ V G     +   
Sbjct: 273 LALMVAFLINVSVISVSGAVCNAPNLSPEDRANCEDLDLNKASFLLRNVVGKWSSKL--- 329

Query: 140 WGIGLLAAGQSSTITGTYAGQFIMGGFLNLRIKKWMRALITRSCAIIPTMAVALIFDSSK 199
           + I LLA+GQSSTITGTYAGQ++M GFL+LR++ W+R L+TR  AIIP++ VALI  S+ 
Sbjct: 330 FAIALLASGQSSTITGTYAGQYVMQGFLDLRLEPWLRNLLTRCLAIIPSLIVALIGGSAG 389

Query: 200 QSLDVLSGWLNVIQSVQIPFALIPLL 225
               ++    ++I S ++PFAL+PLL
Sbjct: 390 AGKLIIIA--SMILSFELPFALVPLL 413


>AT1G15960.1 | Symbols: NRAMP6, ATNRAMP6 | NRAMP metal ion
           transporter 6 | chr1:5482202-5485066 REVERSE LENGTH=527
          Length = 527

 Score =  144 bits (362), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/206 (43%), Positives = 130/206 (63%), Gaps = 14/206 (6%)

Query: 28  IFVPKLSSR-TIQQAVGVVGCLIMPYNLFLHSALVQSRKIDHTNKGRVQEALNYYSIQST 86
           +FVP+L        A+ ++G ++MP+NLFLHSALV SRKI  +  G ++EA  YY I+S 
Sbjct: 206 LFVPQLKGNGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSVTG-IKEACRYYLIESG 264

Query: 87  LALLVSFVINIFVTSVFAKGFYGSKIA-------NNIGLANAGQYLQEVYGSGVFPILFI 139
           LAL+V+F+IN+ V SV       S ++        ++ L  A   L+ V G     +   
Sbjct: 265 LALMVAFLINVSVISVSGAVCNASDLSPEDRASCQDLDLNKASFLLRNVVGKWSSKL--- 321

Query: 140 WGIGLLAAGQSSTITGTYAGQFIMGGFLNLRIKKWMRALITRSCAIIPTMAVALIFDSSK 199
           + I LLA+GQSSTITGTYAGQ++M GFL+LR++ W+R  +TR  AIIP++ VALI  S+ 
Sbjct: 322 FAIALLASGQSSTITGTYAGQYVMQGFLDLRLEPWLRNFLTRCLAIIPSLIVALIGGSAG 381

Query: 200 QSLDVLSGWLNVIQSVQIPFALIPLL 225
               ++    ++I S ++PFAL+PLL
Sbjct: 382 AGKLIIIA--SMILSFELPFALVPLL 405