Miyakogusa Predicted Gene
- Lj5g3v1303370.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1303370.1 Non Chatacterized Hit- tr|I1NIL0|I1NIL0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.53816 PE,86.11,0,SAP
domain,NULL; SAP,DNA-binding SAP; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; seg,NULL; PPR,CUFF.55135.1
(893 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G04260.1 | Symbols: PTAC3 | plastid transcriptionally active ... 927 0.0
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 7e-11
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 9e-11
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 1e-10
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 1e-10
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 1e-10
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 1e-10
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 63 1e-09
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 62 1e-09
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 62 1e-09
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 2e-09
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 5e-09
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 8e-09
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-08
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 60 1e-08
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 58 3e-08
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 57 4e-08
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 6e-08
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 6e-08
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 6e-08
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 6e-08
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 8e-08
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 8e-08
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 8e-08
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 56 1e-07
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-07
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 55 2e-07
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 3e-07
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 3e-07
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 3e-07
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 6e-07
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 6e-07
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 7e-07
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 7e-07
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 7e-07
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 53 8e-07
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 53 1e-06
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 1e-06
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 2e-06
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 52 2e-06
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 3e-06
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 51 4e-06
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 4e-06
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 4e-06
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 51 4e-06
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 5e-06
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 7e-06
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 8e-06
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 9e-06
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 9e-06
>AT3G04260.1 | Symbols: PTAC3 | plastid transcriptionally active 3 |
chr3:1123231-1127515 REVERSE LENGTH=910
Length = 910
Score = 927 bits (2396), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/558 (79%), Positives = 491/558 (87%), Gaps = 1/558 (0%)
Query: 59 TALENGLRFSFMEELMNRARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQ 118
+ALE LR +FM+ELM RARNRD++ VSE+IYDMIAAGL+PGPRSFHGLVV++ALNGDEQ
Sbjct: 66 SALERSLRLTFMDELMERARNRDTSGVSEVIYDMIAAGLSPGPRSFHGLVVAHALNGDEQ 125
Query: 119 AAMDSLRRELGAGLRPVHETFVALVRLFGSKGSATRGLEILAAMEKLNYDIRQAWLILIE 178
AM SLR+ELGAG RP+ ET +ALVRL GSKG+ATRGLEILAAMEKL YDIRQAWLIL+E
Sbjct: 126 GAMHSLRKELGAGQRPLPETMIALVRLSGSKGNATRGLEILAAMEKLKYDIRQAWLILVE 185
Query: 179 ELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMA 238
EL+R +LEDANKVF+KG++GG+RAT+++YDL+IEEDCK GDHSNALDISYEMEAAGRMA
Sbjct: 186 ELMRINHLEDANKVFLKGARGGMRATDQLYDLMIEEDCKAGDHSNALDISYEMEAAGRMA 245
Query: 239 TTFHFNCLLSVQATCGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQD 298
TTFHFNCLLSVQATCGIPEVA+ATFENMEYGE FMKPDTETYNWVIQAYTRAESYDRVQD
Sbjct: 246 TTFHFNCLLSVQATCGIPEVAYATFENMEYGEVFMKPDTETYNWVIQAYTRAESYDRVQD 305
Query: 299 VAELLGMMVEDYKRIQPNVKTHALLVECFTKYCVVREAIRHFRALINFEGGIKALHNGGN 358
VAELLGMMVED+KR+QPNVKT+ALLVECFTKYCVV+EAIRHFRAL NFEGG LHN GN
Sbjct: 306 VAELLGMMVEDHKRVQPNVKTYALLVECFTKYCVVKEAIRHFRALKNFEGGTVILHNAGN 365
Query: 359 YGDPLSLYLRALCREGRIVELLEALEAMAKDNHPIPPRAMILSRKYRTLVSSWIEPLQEE 418
+ DPLSLYLRALCREGRIVEL++AL+AM KDN PIPPRAMI+SRKYRTLVSSWIEPLQEE
Sbjct: 366 FEDPLSLYLRALCREGRIVELIDALDAMRKDNQPIPPRAMIMSRKYRTLVSSWIEPLQEE 425
Query: 419 AELGYEIDYIARYVEEGGLTGERKRWVPRSGKTPLDPDCDGFIYSNPMETSFKQRCXXXX 478
AELGYEIDY+ARY+EEGGLTGERKRWVPR GKTPLDPD GFIYSNP+ETSFKQRC
Sbjct: 426 AELGYEIDYLARYIEEGGLTGERKRWVPRRGKTPLDPDASGFIYSNPIETSFKQRCLEDW 485
Query: 479 XXXXXXXXXXXQFEGLAALGDGVSESDYIRVLERLKKLIKGPEQNVLKPKAASKMVVSEL 538
Q EGL LGD SESDY+RV+ERL+ +IKGP N+LKPKAASKMVVSEL
Sbjct: 486 KVHHRKLLRTLQSEGLPVLGDA-SESDYMRVVERLRNIIKGPALNLLKPKAASKMVVSEL 544
Query: 539 KEELEAQGLPIDGTRNVLYQRVQKARRINQSRGRPLWXXXXXXXXXXXXXXLDALISRVK 598
KEELEAQGLPIDGTRNVLYQRVQKARRIN+SRGRPLW +D LI R+K
Sbjct: 545 KEELEAQGLPIDGTRNVLYQRVQKARRINKSRGRPLWVPPIEEEEEEVDEEVDDLICRIK 604
Query: 599 LEEGNTEFWKRRFLGEGL 616
L EG+TEFWKRRFLGEGL
Sbjct: 605 LHEGDTEFWKRRFLGEGL 622
Score = 291 bits (746), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 137/208 (65%), Positives = 166/208 (79%)
Query: 678 VKDKEVEAKKPLQMIGVQLLKDSNQPTATSKKYKRRSRVQAENXXXXXWFPLDIFEAFEE 737
VK+K +AKK LQMIGVQLLK+S++ T K+ KR SR+ E+ WFP + FEAF+E
Sbjct: 692 VKNKAADAKKHLQMIGVQLLKESDEANRTKKRGKRASRMTLEDDADEDWFPEEPFEAFKE 751
Query: 738 MRKRKVFDVSDMYTLADAWGWTWERELKNKPPRRWSQEREVELAIKVMQKVIELGGAPTI 797
MR+RKVFDV+DMYT+AD WGWTWE++ KNK PR+WSQE EVELAI +M KVIELGG PTI
Sbjct: 752 MRERKVFDVADMYTIADVWGWTWEKDFKNKTPRKWSQEWEVELAIVLMTKVIELGGIPTI 811
Query: 798 GDCAVILRAAIRAPLPSAFLTILQTTHGLGYKFGRPLYDEVISLCVDIGELDXXXXXXXE 857
GDCAVILRAA+RAP+PSAFL ILQTTH LGY FG PLYDE+I+LC+D+GELD +
Sbjct: 812 GDCAVILRAALRAPMPSAFLKILQTTHSLGYSFGSPLYDEIITLCLDLGELDAAIAIVAD 871
Query: 858 LETTGISVSDQILDRVISAKQKIDDPSS 885
+ETTGI+V DQ LD+VISA+Q + P S
Sbjct: 872 METTGITVPDQTLDKVISARQSNESPRS 899
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 113/261 (43%), Gaps = 14/261 (5%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLF 146
EL+ M+ G P + + LV LNG A+ + R + G +P T+ ++++
Sbjct: 163 ELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVM 222
Query: 147 GSKGSATRGLEILAAME--KLNYDIRQAWLILIEELVRNKYLEDANKVFMKGSKGGLRAT 204
G +E+L ME K+ D + + I+I+ L ++ L++A +F + G +A
Sbjct: 223 CKSGQTALAMELLRKMEERKIKLDAVK-YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 281
Query: 205 NEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFE 264
IY LI C G + + +M F+ L+ C + E E
Sbjct: 282 IIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALID----CFVKEGKLREAE 337
Query: 265 NM--EYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHAL 322
+ E + + PDT TY +I + + D+ +L +MV K PN++T +
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN---HMLDLMVS--KGCGPNIRTFNI 392
Query: 323 LVECFTKYCVVREAIRHFRAL 343
L+ + K ++ + + FR +
Sbjct: 393 LINGYCKANLIDDGLELFRKM 413
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 113/260 (43%), Gaps = 10/260 (3%)
Query: 86 SELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRL 145
++L+ DMI + P +F L+ + G + A + + + G+ P T+ +L+
Sbjct: 302 AKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDG 361
Query: 146 FGSKGSATRGLEILAAM--EKLNYDIRQAWLILIEELVRNKYLEDANKVFMKGSKGGLRA 203
F + + +L M + +IR + ILI + ++D ++F K S G+ A
Sbjct: 362 FCKENQLDKANHMLDLMVSKGCGPNIR-TFNILINGYCKANLIDDGLELFRKMSLRGVVA 420
Query: 204 TNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATF 263
Y+ LI+ C++G A ++ EM + + LL G PE A F
Sbjct: 421 DTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIF 480
Query: 264 ENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALL 323
E +E + M+ D YN +I A D D+ L + K ++P+VKT+ ++
Sbjct: 481 EKIEKSK--MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL-----KGVKPDVKTYNIM 533
Query: 324 VECFTKYCVVREAIRHFRAL 343
+ K + EA FR +
Sbjct: 534 IGGLCKKGSLSEADLLFRKM 553
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 100/223 (44%), Gaps = 5/223 (2%)
Query: 69 FMEELMNRARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRREL 128
F + +RN + + E M++ GL P ++ LV + NGD AA + + +
Sbjct: 348 FTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMI 407
Query: 129 GAGLRPVHETFVALVRLFGSKGSATRGLEILAAMEKLNYDI-RQAWLILIEELVRNKYLE 187
GLRP T+ L+ F G LEI M++ ++ R + L+ + + +
Sbjct: 408 RRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVI 467
Query: 188 DANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLL 247
DA + + + G++ + Y ++++ CK GD + EM++ G + + +N LL
Sbjct: 468 DAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLL 527
Query: 248 SVQATCGIPEVAFATFENM-EYGEDFMKPDTETYNWVIQAYTR 289
+ G + A + M G + PD TYN +++ + R
Sbjct: 528 NGLCKLGQMKNADMLLDAMLNIG---VVPDDITYNTLLEGHHR 567
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 139/323 (43%), Gaps = 24/323 (7%)
Query: 75 NRARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRP 134
N R + A+++L+ +M+ G P +++ L+ SY AM+ + AG +P
Sbjct: 373 NLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKP 432
Query: 135 VHETFVALVRLFGSKGSATRGLEILAAMEK--LNYDIRQAWLILIEELVRNKYLEDANKV 192
T+ L+ + G +++ M+ L+ D + ++I L + +L A+K+
Sbjct: 433 DRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTF-TYSVIINCLGKAGHLPAAHKL 491
Query: 193 FMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQAT 252
F + G Y+++++ K ++ NAL + +M+ AG ++ ++ V
Sbjct: 492 FCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGH 551
Query: 253 CGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKR 312
CG E A A F M+ + PD Y ++ + +A + ++ + + +
Sbjct: 552 CGYLEEAEAVFTEMQ--QKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM-----LHAG 604
Query: 313 IQPNVKTHALLVECFTKYCVVREAIRHFRALINFEGGIKALHNGGNYGDPLSLY--LRAL 370
++PNV T L+ F + + EA + ++ G++ L Y L +
Sbjct: 605 LRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLAL--GLRP---------SLQTYTLLLSC 653
Query: 371 CREGRI-VELLEALEAMAKDNHP 392
C +GR +++ + MA HP
Sbjct: 654 CTDGRSKLDMGFCGQLMASTGHP 676
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 139/323 (43%), Gaps = 24/323 (7%)
Query: 75 NRARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRP 134
N R + A+++L+ +M+ G P +++ L+ SY AM+ + AG +P
Sbjct: 373 NLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKP 432
Query: 135 VHETFVALVRLFGSKGSATRGLEILAAMEK--LNYDIRQAWLILIEELVRNKYLEDANKV 192
T+ L+ + G +++ M+ L+ D + ++I L + +L A+K+
Sbjct: 433 DRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTF-TYSVIINCLGKAGHLPAAHKL 491
Query: 193 FMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQAT 252
F + G Y+++++ K ++ NAL + +M+ AG ++ ++ V
Sbjct: 492 FCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGH 551
Query: 253 CGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKR 312
CG E A A F M+ + PD Y ++ + +A + ++ + + +
Sbjct: 552 CGYLEEAEAVFTEMQ--QKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM-----LHAG 604
Query: 313 IQPNVKTHALLVECFTKYCVVREAIRHFRALINFEGGIKALHNGGNYGDPLSLY--LRAL 370
++PNV T L+ F + + EA + ++ G++ L Y L +
Sbjct: 605 LRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLAL--GLRP---------SLQTYTLLLSC 653
Query: 371 CREGRI-VELLEALEAMAKDNHP 392
C +GR +++ + MA HP
Sbjct: 654 CTDGRSKLDMGFCGQLMASTGHP 676
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 139/323 (43%), Gaps = 24/323 (7%)
Query: 75 NRARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRP 134
N R + A+++L+ +M+ G P +++ L+ SY AM+ + AG +P
Sbjct: 373 NLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKP 432
Query: 135 VHETFVALVRLFGSKGSATRGLEILAAMEK--LNYDIRQAWLILIEELVRNKYLEDANKV 192
T+ L+ + G +++ M+ L+ D + ++I L + +L A+K+
Sbjct: 433 DRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTF-TYSVIINCLGKAGHLPAAHKL 491
Query: 193 FMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQAT 252
F + G Y+++++ K ++ NAL + +M+ AG ++ ++ V
Sbjct: 492 FCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGH 551
Query: 253 CGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKR 312
CG E A A F M+ + PD Y ++ + +A + ++ + + +
Sbjct: 552 CGYLEEAEAVFTEMQ--QKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM-----LHAG 604
Query: 313 IQPNVKTHALLVECFTKYCVVREAIRHFRALINFEGGIKALHNGGNYGDPLSLY--LRAL 370
++PNV T L+ F + + EA + ++ G++ L Y L +
Sbjct: 605 LRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLAL--GLRP---------SLQTYTLLLSC 653
Query: 371 CREGRI-VELLEALEAMAKDNHP 392
C +GR +++ + MA HP
Sbjct: 654 CTDGRSKLDMGFCGQLMASTGHP 676
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 121/317 (38%), Gaps = 22/317 (6%)
Query: 77 ARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVH 136
+NR EL M G P +++ LV G A LR + + P
Sbjct: 199 CKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNV 258
Query: 137 ETFVALVRLFGSKGSATRGLEILAAMEKLN-YDIRQAWLILIEELVRNKYLEDANKVFMK 195
TF AL+ F G E+ M +++ Y + LI L L++A ++F
Sbjct: 259 ITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYL 318
Query: 196 GSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGI 255
+ G IY LI CK + + I YEM G +A T + L+ G
Sbjct: 319 MERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGR 378
Query: 256 PEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKR--- 312
P+VA F M PD TYN ++ ++ +M+ +Y R
Sbjct: 379 PDVAQEVFNQMSSRRA--PPDIRTYNVLLDGLCCNGKVEK--------ALMIFEYMRKRE 428
Query: 313 IQPNVKTHALLVECFTKYCVVREAIRHFRALINFEGGIKALHNGGNYGDPLSLYLRALCR 372
+ N+ T+ ++++ K V +A F +L F G+K N Y +S CR
Sbjct: 429 MDINIVTYTIIIQGMCKLGKVEDAFDLFCSL--FSKGMKP--NVITYTTMIS----GFCR 480
Query: 373 EGRIVELLEALEAMAKD 389
G I E + M +D
Sbjct: 481 RGLIHEADSLFKKMKED 497
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 102/254 (40%), Gaps = 10/254 (3%)
Query: 78 RNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHE 137
++R E+ MI G P +++ L+V D + M L+ GL+P
Sbjct: 200 KSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVY 259
Query: 138 TFVALVRLFGSKGSATRGLEILAAM--EKLNYDIRQAWLILIEELVRNKYLEDANKVFMK 195
TF +R+ G G EIL M E D+ + +LI+ L + L+ A +VF K
Sbjct: 260 TFTICIRVLGRAGKINEAYEILKRMDDEGCGPDV-VTYTVLIDALCTARKLDCAKEVFEK 318
Query: 196 GSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGI 255
G + Y L++ D + EME G + F L+ G
Sbjct: 319 MKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGN 378
Query: 256 PEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQP 315
AF T + M + + P+ TYN +I R R+ D EL G M + ++P
Sbjct: 379 FGEAFDTLDVMR--DQGILPNLHTYNTLICGLLRVH---RLDDALELFGNM--ESLGVKP 431
Query: 316 NVKTHALLVECFTK 329
T+ + ++ + K
Sbjct: 432 TAYTYIVFIDYYGK 445
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 8/198 (4%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLF 146
+L M+ G P ++ L+ + G+ AA +R + G+RP +T+ LV
Sbjct: 912 QLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCL 971
Query: 147 GSKGSATRGLEILAAMEK--LNYDIRQAWLILIEELVRNKYLEDANKVF--MKGSKGGLR 202
G GL +++ LN D+ + ++I L ++ LE+A +F MK S+G +
Sbjct: 972 CMVGRVDEGLHYFKELKESGLNPDV-VCYNLIINGLGKSHRLEEALVLFNEMKTSRG-IT 1029
Query: 203 ATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFAT 262
Y+ LI G A I E++ AG F FN L+ + G PE A+A
Sbjct: 1030 PDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAV 1089
Query: 263 FENMEYGEDFMKPDTETY 280
++ M G P+T TY
Sbjct: 1090 YQTMVTGG--FSPNTGTY 1105
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 117/283 (41%), Gaps = 36/283 (12%)
Query: 77 ARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVH 136
+ D V++L+ +M G P +++ L+ L G A+ L R + + P
Sbjct: 268 CKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPND 327
Query: 137 ETFVALVRLFGSKGSATRGLEILAAMEKLNYDIRQ-AWLILIEELVRNKYLEDANKVFMK 195
T+ L+ + AT + +L++ME+ Y + Q + +LI L + E+A ++ K
Sbjct: 328 VTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRK 387
Query: 196 GSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLS------- 248
++ G + +Y +L++ C+ G + A +I M A+G + + ++ L+
Sbjct: 388 MAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGL 447
Query: 249 --------------------------VQATCGIPEVAFATFENMEYGEDFMKPDTETYNW 282
+ CG+ V A + +KPDT Y+
Sbjct: 448 CEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSS 507
Query: 283 VIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVE 325
+I+ S D + M+ ++ + QP+V T+ +L++
Sbjct: 508 IIKGLCGIGSMDAALKLYH--EMLCQEEPKSQPDVVTYNILLD 548
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 113/267 (42%), Gaps = 13/267 (4%)
Query: 80 RDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETF 139
R S AV+ L+ M G P +F+ L+ L+ AM + R + G +P T+
Sbjct: 166 RISEAVA-LVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTY 224
Query: 140 VALVRLFGSKGSATRGLEILAAMEKLNYDIRQAWLI---LIEELVRNKYLEDANKVFMKG 196
+V +G +L ME+ + LI +I+ L + K+++DA +F +
Sbjct: 225 GVVVNGLCKRGDTDLAFNLLNKMEQ--GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM 282
Query: 197 SKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIP 256
G+R Y LI C G S+A + +M F F+ L+ G
Sbjct: 283 ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKL 342
Query: 257 EVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPN 316
A ++ M + + P TY+ +I + +DR+ + ++ MV K P+
Sbjct: 343 VEAEKLYDEMV--KRSIDPSIVTYSSLINGFCM---HDRLDEAKQMFEFMVS--KHCFPD 395
Query: 317 VKTHALLVECFTKYCVVREAIRHFRAL 343
V T+ L++ F KY V E + FR +
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREM 422
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 130/308 (42%), Gaps = 19/308 (6%)
Query: 68 SFMEELMNRARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRE 127
S + L N R D+ S L+ DMI +NP +F L+ ++ G A
Sbjct: 296 SLISCLCNYGRWSDA---SRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 128 LGAGLRPVHETFVALVRLFGSKGSATRGLEILAAM-EKLNYDIRQAWLILIEELVRNKYL 186
+ + P T+ +L+ F ++ M K + + LI+ + K +
Sbjct: 353 VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 412
Query: 187 EDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCL 246
E+ +VF + S+ GL Y++LI+ + GD A +I EM + G +N L
Sbjct: 413 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 472
Query: 247 LSVQATCGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMM 306
L G E A FE ++ + M+P TYN +I+ +A +V+D +L +
Sbjct: 473 LDGLCKNGKLEKAMVVFEYLQRSK--MEPTIYTYNIMIEGMCKA---GKVEDGWDLFCNL 527
Query: 307 VEDYKRIQPNVKTHALLVECFTKYCVVREAIRHFRALINFEGGIKALHNGGNYGDPLSLY 366
K ++P+V + ++ F + EA F+ + E G L N G Y +
Sbjct: 528 --SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK--EDG--TLPNSGCY----NTL 577
Query: 367 LRALCREG 374
+RA R+G
Sbjct: 578 IRARLRDG 585
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 114/260 (43%), Gaps = 10/260 (3%)
Query: 86 SELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRL 145
++L+ DMI +NP +F L+ S+ G + A + + + G+ P T+ +L+
Sbjct: 318 AKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDG 377
Query: 146 FGSKGSATRGLEILAAMEKLNYD--IRQAWLILIEELVRNKYLEDANKVFMKGSKGGLRA 203
F + + +++ M D IR + ILI + ++D ++F K S G+ A
Sbjct: 378 FCKENHLDKANQMVDLMVSKGCDPNIR-TFNILINGYCKANRIDDGLELFRKMSLRGVVA 436
Query: 204 TNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATF 263
Y+ LI+ C++G + A ++ EM + + LL G E A F
Sbjct: 437 DTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF 496
Query: 264 ENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALL 323
E +E + M+ D YN +I A D D+ L + K ++P VKT+ ++
Sbjct: 497 EKIEKSK--MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL-----KGVKPGVKTYNIM 549
Query: 324 VECFTKYCVVREAIRHFRAL 343
+ K + EA FR +
Sbjct: 550 IGGLCKKGPLSEAELLFRKM 569
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 110/259 (42%), Gaps = 10/259 (3%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLF 146
EL+ M+ G P + + LV L+G E AM + + + G +P T+ ++ +
Sbjct: 179 ELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVM 238
Query: 147 GSKGSATRGLEILAAMEKLNYDIRQA-WLILIEELVRNKYLEDANKVFMKGSKGGLRATN 205
G +E+L ME+ N + + I+I+ L ++ L++A +F + G+
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNI 298
Query: 206 EIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCG-IPEVAFATFE 264
Y++LI C G + + +M F+ L+ G + E E
Sbjct: 299 ITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKE 358
Query: 265 NMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLV 324
+ G + PDT TY +I + + D+ + +L MV K PN++T +L+
Sbjct: 359 MIHRG---IAPDTITYTSLIDGFCKENHLDKANQMVDL---MVS--KGCDPNIRTFNILI 410
Query: 325 ECFTKYCVVREAIRHFRAL 343
+ K + + + FR +
Sbjct: 411 NGYCKANRIDDGLELFRKM 429
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 138/342 (40%), Gaps = 46/342 (13%)
Query: 80 RDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETF 139
R S AV+ L+ M+ G P +F L+ L+ A+ + R + G +P T+
Sbjct: 170 RISDAVA-LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 140 VALVRLFGSKGSATRGLEILAAME--KLNYDIRQAWLILIEELVRNKYLEDANKVFMKGS 197
+V +G L +L ME K+ D+ + +I+ L + ++++DA +F +
Sbjct: 229 GVVVNGLCKRGDTDLALNLLNKMEAAKIEADV-VIFNTIIDSLCKYRHVDDALNLFKEME 287
Query: 198 KGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPE 257
G+R Y LI C G S+A + +M FN L+ + E
Sbjct: 288 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF----VKE 343
Query: 258 VAFATFENMEYGEDFMK----PDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRI 313
F E + +D +K PD TYN ++ + +DR+ ++ MV K
Sbjct: 344 GKFVEAEKLY--DDMIKRSIDPDIFTYNSLVNGFCM---HDRLDKAKQMFEFMVS--KDC 396
Query: 314 QPNVKTHALLVECFTKYCVVREAIRHFRAL---------INFEGGIKALHNGGNY----- 359
P+V T+ L++ F K V + FR + + + I+ L + G+
Sbjct: 397 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 456
Query: 360 --------GDP-----LSLYLRALCREGRIVELLEALEAMAK 388
G P S+ L LC G++ + LE + M K
Sbjct: 457 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 498
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 115/265 (43%), Gaps = 11/265 (4%)
Query: 79 NRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHET 138
NR S AV+ L+ M+ G P +F LV + A+ + R + G +P T
Sbjct: 149 NRISEAVA-LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVT 207
Query: 139 FVALVRLFGSKGSATRGLEILAAMEK--LNYDIRQAWLILIEELVRNKYLEDANKVFMKG 196
+ A++ +G L +L MEK + D+ + +I+ L + ++++DA +F +
Sbjct: 208 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADV-VIYSTVIDSLCKYRHVDDALNLFTEM 266
Query: 197 SKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIP 256
G+R Y LI C G S+A + +M FN L+ A G
Sbjct: 267 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKL 326
Query: 257 EVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPN 316
A F+ M + + P+ TYN +I + +DR+ + ++ +MV K P+
Sbjct: 327 IEAEKLFDEMI--QRSIDPNIVTYNSLINGFCM---HDRLDEAQQIFTLMVS--KDCLPD 379
Query: 317 VKTHALLVECFTKYCVVREAIRHFR 341
V T+ L+ F K V + + FR
Sbjct: 380 VVTYNTLINGFCKAKKVVDGMELFR 404
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 22/220 (10%)
Query: 171 QAWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYE 230
QA +L+ LV+ + + K+F K K G+ A +Y++L+ K GD A + E
Sbjct: 169 QACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSE 228
Query: 231 MEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRA 290
ME G F +N L+SV + A + + ME + P+ TYN I ++R
Sbjct: 229 MEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRME--RSGVAPNIVTYNSFIHGFSRE 286
Query: 291 ESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVECFTKYCVVREAIRHFRALI---NFE 347
R+++ L + +D + N T+ L++ + + + EA+R R ++ F
Sbjct: 287 ---GRMREATRLFREIKDD---VTANHVTYTTLIDGYCRMNDIDEALR-LREVMESRGFS 339
Query: 348 GGIKALHNGGNYGDPLSLYLRALCREGRIVELLEALEAMA 387
G+ ++ LR LC +GRI E L M+
Sbjct: 340 PGVVTYNS----------ILRKLCEDGRIREANRLLTEMS 369
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/328 (19%), Positives = 131/328 (39%), Gaps = 28/328 (8%)
Query: 88 LIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFG 147
L+ +M G++ +H ++ Y + DE+ + +R G P T+ L+ L+
Sbjct: 436 LVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYT 495
Query: 148 SKGSATRGLEILAAM--EKLNYDIRQAWLILIEELVRNKYLEDANKVFMKGSKGGLRATN 205
G ++ LE+ M E + ++++ + ++I V+ K +A VF K G++
Sbjct: 496 KVGKISKALEVSRVMKEEGVKHNLK-TYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDV 554
Query: 206 EIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFEN 265
+Y+ +I C +G+ A+ EM+ TT F ++ A G + F+
Sbjct: 555 ILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDM 614
Query: 266 MEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVE 325
M P T+N +I ++ ++ + + + + N T+ +++
Sbjct: 615 MRRCGCV--PTVHTFNGLINGLVEKRQMEKAVEILDEMTL-----AGVSANEHTYTKIMQ 667
Query: 326 CFTKYCVVREAIRHFRALINFEGGIKALHNGGNYGDPLSL--YLRALCREGRIVELLEAL 383
+ +A +F L N G D + L+A C+ GR+ L
Sbjct: 668 GYASVGDTGKAFEYF----------TRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVT 717
Query: 384 EAMAKDNHPIPPRAMILSRKYRTLVSSW 411
+ M+ N IP + + Y L+ W
Sbjct: 718 KEMSARN--IPRNSFV----YNILIDGW 739
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/299 (18%), Positives = 116/299 (38%), Gaps = 41/299 (13%)
Query: 80 RDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETF 139
+D A + DM+ G+ P ++ ++ ++ G+ A+ +++ RP TF
Sbjct: 533 KDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF 592
Query: 140 VALVRLFGSKGSATRGLEILAAMEKLN-YDIRQAWLILIEELVRNKYLEDANKVFMKGSK 198
+ ++ + G R LE+ M + + LI LV + +E A ++ + +
Sbjct: 593 MPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTL 652
Query: 199 GGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEV 258
G+ A Y +++ VGD A + ++ G F + LL G +
Sbjct: 653 AGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQS 712
Query: 259 AFATFENM---------------------------------EYGEDFMKPDTETYNWVIQ 285
A A + M + ++ +KPD TY I
Sbjct: 713 ALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFIS 772
Query: 286 AYTRAESYDR-VQDVAELLGMMVEDYKRIQPNVKTHALLVECFTKYCVVREAIRHFRAL 343
A ++A +R Q + E+ + V +PN+KT+ L++ + + + +A+ + +
Sbjct: 773 ACSKAGDMNRATQTIEEMEALGV------KPNIKTYTTLIKGWARASLPEKALSCYEEM 825
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 5/202 (2%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLF 146
E++ +M AG++ ++ ++ YA GD A + R GL T+ AL++
Sbjct: 645 EILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKAC 704
Query: 147 GSKGSATRGLEILAAMEKLNYDIRQAWL--ILIEELVRNKYLEDANKVFMKGSKGGLRAT 204
G L + M N R +++ ILI+ R + +A + + K G++
Sbjct: 705 CKSGRMQSALAVTKEMSARNIP-RNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPD 763
Query: 205 NEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFE 264
Y I K GD + A EMEA G + L+ A +PE A + +E
Sbjct: 764 IHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYE 823
Query: 265 NMEYGEDFMKPDTETYNWVIQA 286
M+ +KPD Y+ ++ +
Sbjct: 824 EMKAMG--IKPDKAVYHCLLTS 843
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 113/273 (41%), Gaps = 11/273 (4%)
Query: 68 SFMEELMNRARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRE 127
+FM + A++ D E+ M G P +F+GL+ + A++ L
Sbjct: 591 TFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEM 650
Query: 128 LGAGLRPVHETFVALVRLFGSKGSATRGLEILAAM--EKLNYDIRQAWLILIEELVRNKY 185
AG+ T+ +++ + S G + E + E L+ DI + L++ ++
Sbjct: 651 TLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIF-TYEALLKACCKSGR 709
Query: 186 LEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNC 245
++ A V + S + + +Y++LI+ + GD A D+ +M+ G +
Sbjct: 710 MQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTS 769
Query: 246 LLSVQATCGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGM 305
+S + G A T E ME +KP+ +TY +I+ + RA ++ E +
Sbjct: 770 FISACSKAGDMNRATQTIEEME--ALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKA 827
Query: 306 MVEDYKRIQPNVKT-HALLVECFTKYCVVREAI 337
M I+P+ H LL ++ + I
Sbjct: 828 M-----GIKPDKAVYHCLLTSLLSRASIAEAYI 855
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 137/342 (40%), Gaps = 46/342 (13%)
Query: 80 RDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETF 139
R S AV+ L+ M+ G P +F L+ L+ A+ + R + G +P T+
Sbjct: 95 RISDAVA-LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 153
Query: 140 VALVRLFGSKGSATRGLEILAAME--KLNYDIRQAWLILIEELVRNKYLEDANKVFMKGS 197
+V +G +L ME K+ D+ + +I+ L + ++++DA +F +
Sbjct: 154 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV-VIFNTIIDSLCKYRHVDDALNLFKEME 212
Query: 198 KGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPE 257
G+R Y LI C G S+A + +M FN L+ + E
Sbjct: 213 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF----VKE 268
Query: 258 VAFATFENMEYGEDFMK----PDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRI 313
F E + +D +K PD TYN +I + +DR+ ++ MV K
Sbjct: 269 GKFVEAEKLH--DDMIKRSIDPDIFTYNSLINGFCM---HDRLDKAKQMFEFMVS--KDC 321
Query: 314 QPNVKTHALLVECFTKYCVVREAIRHFRAL---------INFEGGIKALHNGGNY----- 359
P++ T+ L++ F K V + FR + + + I+ L + G+
Sbjct: 322 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 381
Query: 360 --------GDP-----LSLYLRALCREGRIVELLEALEAMAK 388
G P S+ L LC G++ + LE + M K
Sbjct: 382 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 423
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 110/249 (44%), Gaps = 12/249 (4%)
Query: 92 MIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFGSKGS 151
M+ GL P +++ L+ Y G Q A + + G P T+ +L+ +G
Sbjct: 312 MVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGE 371
Query: 152 ATRGLEILAAMEKLNYDIRQAWLI---LIEELVRNKYLEDANKVFMKGSKGGLRATNEIY 208
R L + E L I+ ++ LI+ L + +A ++ + S+ GL + +
Sbjct: 372 TNRALALFN--EALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTF 429
Query: 209 DLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEY 268
++L+ CK+G S+A + M + G F FN L+ +T E A + M
Sbjct: 430 NILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVML- 488
Query: 269 GEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVECFT 328
++ + PD TYN ++ + + +DV E MVE K PN+ T +L+E
Sbjct: 489 -DNGVDPDVYTYNSLLNGLCKTSKF---EDVMETYKTMVE--KGCAPNLFTFNILLESLC 542
Query: 329 KYCVVREAI 337
+Y + EA+
Sbjct: 543 RYRKLDEAL 551
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 142/361 (39%), Gaps = 21/361 (5%)
Query: 68 SFMEELMNRARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRE 127
S+ L+ AR R+ A+ +++ +M AG P + +V+ + D ++
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 128 LGAGLRPVHETFVALVRLFGSKGSATRGLEILAAMEKLNYD-IRQAWLILIEELVRNKYL 186
RP + L+ F + + L + M++L Y+ + LI + +
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 187 EDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCL 246
+ A + + L A +Y++ I+ KVG A +E+EA G + +
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 247 LSVQATCGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMM 306
+ V + A FE++E ++ P T YN +I Y A +D + E
Sbjct: 280 IGVLCKANRLDEAVEMFEHLE--KNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER---- 333
Query: 307 VEDYKRIQPNVKTHALLVECFTKYCVVREAIRHFRALINFEGGIKALHNGGNYGDPLSLY 366
+ K P+V + ++ C K V EA++ F E A N Y ++
Sbjct: 334 -QRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFE-----EMKKDAAPNLSTY----NIL 383
Query: 367 LRALCREGRIVELLEALEAMAKDNHPIPPRAMILSRKYRTLVSSWIEPLQEEAELGYEID 426
+ LCR G++ E ++M K + P ++ L S + L E + E+D
Sbjct: 384 IDMLCRAGKLDTAFELRDSMQKAG--LFPNVRTVNIMVDRLCKS--QKLDEACAMFEEMD 439
Query: 427 Y 427
Y
Sbjct: 440 Y 440
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 114/259 (44%), Gaps = 10/259 (3%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLF 146
EL+ M+ G P + + LV LNG A+ + R + G +P T+ ++ +
Sbjct: 179 ELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVM 238
Query: 147 GSKGSATRGLEILAAMEKLNYDIRQA-WLILIEELVRNKYLEDANKVFMKGSKGGLRATN 205
G +E+L ME+ N + + I+I+ L ++ L++A +F + G +A
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 298
Query: 206 EIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCG-IPEVAFATFE 264
Y+ LI C G + + +M F+ L+ G + E E
Sbjct: 299 ITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKE 358
Query: 265 NMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLV 324
M+ G + P+T TYN +I + + +R+++ +++ +M+ K P++ T +L+
Sbjct: 359 MMQRG---IAPNTITYNSLIDGFCKE---NRLEEAIQMVDLMIS--KGCDPDIMTFNILI 410
Query: 325 ECFTKYCVVREAIRHFRAL 343
+ K + + + FR +
Sbjct: 411 NGYCKANRIDDGLELFREM 429
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 148/365 (40%), Gaps = 27/365 (7%)
Query: 85 VSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVR 144
VS L DM+ G+ P +F+ L+ + + AA + G +P TF LVR
Sbjct: 131 VSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVR 190
Query: 145 LFGSKGSATRGLEILAAMEKLNYDIRQA-WLILIEELVRNKYLEDANKVFMKGSKGGLRA 203
+ G +GLE+L AME + + ++ R +D+ K+ K + GL
Sbjct: 191 GYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVP 250
Query: 204 TNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMA----TTFHFNCLLSVQATCGIPEVA 259
++ I CK G +A I +ME + + +N +L G+ E A
Sbjct: 251 DIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDA 310
Query: 260 FATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKT 319
FE++ +D ++YN +Q R + + V L M + K I P++ +
Sbjct: 311 KTLFESIRENDDL--ASLQSYNIWLQGLVRHGKFIEAETV---LKQMTD--KGIGPSIYS 363
Query: 320 HALLVECFTKYCVVREAIRHFRALINFEGGIKALHNGGNYGDPLSLYLRALCREGRIVEL 379
+ +L++ K ++ +A + L+ G + YG L C G++
Sbjct: 364 YNILMDGLCKLGMLSDA-KTIVGLMKRNG---VCPDAVTYG----CLLHGYCSVGKVDAA 415
Query: 380 LEALEAMAKDNHPIPPRAMILSRKYRTL-----VSSWIEPLQEEAELGYEIDYIARYVEE 434
L+ M ++N P A + +L +S E L++ E GY +D + +
Sbjct: 416 KSLLQEMMRNN--CLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIV 473
Query: 435 GGLTG 439
GL G
Sbjct: 474 DGLCG 478
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 90/214 (42%), Gaps = 22/214 (10%)
Query: 176 LIEELVRNKYLEDANKVF--MKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEA 233
L+ L + +A +F M G K L+ + Y++ I CK G S+A + +ME
Sbjct: 530 LLNGLCKAGRFAEAKNLFAEMMGEK--LQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEK 587
Query: 234 AGRMATTFHFNCLLSVQATCGIPEVAFATFENM-EYGEDFMKPDTETYNWVIQAYTRAES 292
G + +N L+ GI F M E E + P+ TYN IQ E
Sbjct: 588 KGCHKSLETYNSLI---LGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGE- 643
Query: 293 YDRVQDVAELLGMMVEDYKRIQPNVKTHALLVECFTKYCVVREAIRHFRALINFEGGIKA 352
+V+D LL M++ K I PNV + L+E F K A F ++ G +
Sbjct: 644 --KVEDATNLLDEMMQ--KNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEG 699
Query: 353 LHNGGNYGDPLSLYLRALCREGRIVELLEALEAM 386
L+ SL L G++++ E LEA+
Sbjct: 700 LY---------SLMFNELLAAGQLLKATELLEAV 724
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 11/174 (6%)
Query: 157 EILAAMEKLN-YDIRQAWLILIEELVR-NKYLEDANKVFMKGSKGGLRATNEIYDLLIEE 214
E+ AM+K+N Y ILI L + + ++ ++F K S+ G++ + +++ L++
Sbjct: 294 EVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKS 353
Query: 215 DCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYGEDFMK 274
C G AL I EME G + T +N L+ E F M + +K
Sbjct: 354 FCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMR--DKGLK 411
Query: 275 PDTETYNWVIQAYTRAESYDRVQ-DVAELLGMMVEDYKRIQPNVKTHALLVECF 327
P TYN ++ AY R R+Q D+ E L +ED ++PNVK++ L+ +
Sbjct: 412 PSAATYNILMDAYAR-----RMQPDIVETLLREMEDLG-LEPNVKSYTCLISAY 459
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 84/208 (40%), Gaps = 44/208 (21%)
Query: 92 MIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFGSKGS 151
M GL P S+ L+ +Y+++G + A S G++P ET+ +++ F G
Sbjct: 476 MKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGD 535
Query: 152 ATRGLEILAAMEKLNYDIRQAWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLL 211
+ +EI W +++ E ++ G R T Y+ L
Sbjct: 536 TGKLMEI--------------WKLMLREKIK-----------------GTRIT---YNTL 561
Query: 212 IEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCG----IPEVAFATFENME 267
++ K G + A D+ E G + +N L++ A G +P++ E
Sbjct: 562 LDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLL------KE 615
Query: 268 YGEDFMKPDTETYNWVIQAYTRAESYDR 295
+KPD+ TY+ +I A+ R + R
Sbjct: 616 MAALNLKPDSITYSTMIYAFVRVRDFKR 643
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 105/253 (41%), Gaps = 11/253 (4%)
Query: 81 DSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFV 140
D A S+ Y+M + + P ++ ++ + GD A GL P TF
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 141 ALVRLFGSKGSATRGLEILAAMEKLNYDIRQA-WLILIEELVRNKYLEDANKVFMKGSKG 199
L+ + G + M + + LI+ L + L+ AN++ + K
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 200 GLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVA 259
GL+ Y+ ++ CK G+ A+ + E EAAG A T + L+ G + A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 260 FATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKT 319
+ M G+ ++P T+N ++ + + ++D +LL M+ K I PN T
Sbjct: 546 QEILKEM-LGKG-LQPTIVTFNVLMNGFCL---HGMLEDGEKLLNWMLA--KGIAPNATT 598
Query: 320 HALLVECFTKYCV 332
LV+ +YC+
Sbjct: 599 FNSLVK---QYCI 608
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 101/249 (40%), Gaps = 12/249 (4%)
Query: 83 AAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVAL 142
A E +MI G+ P + L+ + GD +AA + P T+ A+
Sbjct: 333 AEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 392
Query: 143 VRLFGSKGSATRGLEILAAM--EKLNYDIRQAWLILIEELVRNKYLEDANKVFMKGSKGG 200
+ F G ++ M + L D + LI + +++DA +V + G
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPD-SVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 201 LRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAF 260
Y LI+ CK GD +A ++ +EM G F +N + V C +
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI--VNGLCKSGNIEE 509
Query: 261 ATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDV-AELLGMMVEDYKRIQPNVKT 319
A E+ + DT TY ++ AY ++ D+ Q++ E+LG K +QP + T
Sbjct: 510 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG------KGLQPTIVT 563
Query: 320 HALLVECFT 328
+L+ F
Sbjct: 564 FNVLMNGFC 572
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 105/253 (41%), Gaps = 11/253 (4%)
Query: 81 DSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFV 140
D A S+ Y+M + + P ++ ++ + GD A GL P TF
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 141 ALVRLFGSKGSATRGLEILAAMEKLNYDIRQA-WLILIEELVRNKYLEDANKVFMKGSKG 199
L+ + G + M + + LI+ L + L+ AN++ + K
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 200 GLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVA 259
GL+ Y+ ++ CK G+ A+ + E EAAG A T + L+ G + A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 260 FATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKT 319
+ M G+ ++P T+N ++ + + ++D +LL M+ K I PN T
Sbjct: 546 QEILKEM-LGKG-LQPTIVTFNVLMNGFCL---HGMLEDGEKLLNWMLA--KGIAPNATT 598
Query: 320 HALLVECFTKYCV 332
LV+ +YC+
Sbjct: 599 FNSLVK---QYCI 608
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 101/249 (40%), Gaps = 12/249 (4%)
Query: 83 AAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVAL 142
A E +MI G+ P + L+ + GD +AA + P T+ A+
Sbjct: 333 AEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 392
Query: 143 VRLFGSKGSATRGLEILAAM--EKLNYDIRQAWLILIEELVRNKYLEDANKVFMKGSKGG 200
+ F G ++ M + L D + LI + +++DA +V + G
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPD-SVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 201 LRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAF 260
Y LI+ CK GD +A ++ +EM G F +N + V C +
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI--VNGLCKSGNIEE 509
Query: 261 ATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDV-AELLGMMVEDYKRIQPNVKT 319
A E+ + DT TY ++ AY ++ D+ Q++ E+LG K +QP + T
Sbjct: 510 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG------KGLQPTIVT 563
Query: 320 HALLVECFT 328
+L+ F
Sbjct: 564 FNVLMNGFC 572
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 129/308 (41%), Gaps = 19/308 (6%)
Query: 68 SFMEELMNRARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRE 127
S + L N R D+ S L+ DMI +NP +F L+ ++ G A
Sbjct: 295 SLIRCLCNYGRWSDA---SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351
Query: 128 LGAGLRPVHETFVALVRLFGSKGSATRGLEILAAM-EKLNYDIRQAWLILIEELVRNKYL 186
+ + P T+ +L+ F + M K + + LI+ + K +
Sbjct: 352 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 411
Query: 187 EDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCL 246
E+ ++F + S+ GL Y+ LI+ + GD A I +M + G ++ L
Sbjct: 412 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471
Query: 247 LSVQATCGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMM 306
L G E A FE ++ + M+PD TYN +I+ +A +V+D +L +
Sbjct: 472 LDGLCKYGKLEKALVVFEYLQKSK--MEPDIYTYNIMIEGMCKA---GKVEDGWDLFCSL 526
Query: 307 VEDYKRIQPNVKTHALLVECFTKYCVVREAIRHFRALINFEGGIKALHNGGNYGDPLSLY 366
K ++PNV + ++ F + + EA FR + E G L N G Y +
Sbjct: 527 --SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK--EDG--TLPNSGTY----NTL 576
Query: 367 LRALCREG 374
+RA R+G
Sbjct: 577 IRARLRDG 584
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 134/323 (41%), Gaps = 32/323 (9%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLF 146
EL+ M G +PG +++ ++ +G + A + L +GL P T+ +L+
Sbjct: 291 ELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 350
Query: 147 GSKGSATRGLEILAAMEKLNYDIRQAWLI--------LIEELVRNKYLEDANKVFMKGSK 198
KG + EK+ D+R ++ ++ R+ L+ A F +
Sbjct: 351 CKKGD-------VVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403
Query: 199 GGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEV 258
GL N IY +LI+ C+ G S A+++ EM G +N +L C +
Sbjct: 404 AGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTIL--HGLCKRKML 461
Query: 259 AFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVK 318
A E E + PD+ T +I + + +Q+ EL M E KRI+ +V
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHCK---LGNLQNAMELFQKMKE--KRIRLDVV 516
Query: 319 THALLVECFTKYCVVREAIRHFRALINFEGGIKALHNGGNYGDPLSLYLRALCREGRIVE 378
T+ L++ F K + A + +++ E L +Y S+ + ALC +G + E
Sbjct: 517 TYNTLLDGFGKVGDIDTAKEIWADMVSKE----ILPTPISY----SILVNALCSKGHLAE 568
Query: 379 LLEALEAMAKDNHPIPPRAMILS 401
+ M N I P MI +
Sbjct: 569 AFRVWDEMISKN--IKPTVMICN 589
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/274 (19%), Positives = 121/274 (44%), Gaps = 15/274 (5%)
Query: 78 RNRDSAAVSELIYDMIAAGLNPGPRSFHGL--VVSYALNGDE-QAAMDSLRRELGAGLRP 134
+ RD + L +M+ + G SF+ V+ Y ++ + A ++ +G +
Sbjct: 217 QGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKI 276
Query: 135 VHETFVALVRLFGSKGSATRGLEILAAMEKLNYDIR-QAWLILIEELVRNKYLEDANKVF 193
+T+ L+ LF +KG + EI +MEK + + + ++I L ++ L+ A K+F
Sbjct: 277 DTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLF 336
Query: 194 MKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATC 253
+ + LR + ++ L++ K G ++ + EM+ G + F L+ A
Sbjct: 337 QQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKA 396
Query: 254 GIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKR- 312
G + A ++ M+ + +P+ Y +I+++ ++ + V +D ++
Sbjct: 397 GKLDTALRLWDEMK--KSGFRPNFGLYTMIIESHAKSGKLEVAMTV-------FKDMEKA 447
Query: 313 -IQPNVKTHALLVECFTKYCVVREAIRHFRALIN 345
P T++ L+E V A++ + ++ N
Sbjct: 448 GFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTN 481
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 10/258 (3%)
Query: 85 VSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVR 144
V +L+ +M + G P S++ L+ +YA +G + AM + AG P T+ L+
Sbjct: 301 VCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLN 360
Query: 145 LFGSKGSATRGLEILAAMEKLNYDIRQA-WLILIEELVRNKYLEDANKVFMKGSKGGLRA 203
LFG G ++ M+ N D A + ILIE Y ++ +F + +
Sbjct: 361 LFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEP 420
Query: 204 TNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATF 263
E Y+ +I K G H +A I M A + ++ + ++ + E A F
Sbjct: 421 DMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAF 480
Query: 264 ENM-EYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHAL 322
M E G + P ET++ ++ ++ R V++ +L +V+ I N T
Sbjct: 481 NTMHEVGSN---PSIETFHSLLYSFARG---GLVKESEAILSRLVD--SGIPRNRDTFNA 532
Query: 323 LVECFTKYCVVREAIRHF 340
+E + + EA++ +
Sbjct: 533 QIEAYKQGGKFEEAVKTY 550
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 116/287 (40%), Gaps = 20/287 (6%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLF 146
E+ +M + G++ S+ L+ +Y NG + +++ L R + P T+ ++
Sbjct: 162 EVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINAC 221
Query: 147 GSKGSATRGLEILAA---MEKLNYDIRQAWLILIEELVRNKYLEDANKVFMKGSKGGLRA 203
G GL L A E + DI +L +R ++A VF + GG+
Sbjct: 222 ARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRG-LGDEAEMVFRTMNDGGIVP 280
Query: 204 TNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATF 263
Y L+E K+ D+ EM + G + +N LL A G + A F
Sbjct: 281 DLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVF 340
Query: 264 ENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALL 323
M+ P+ TY+ ++ + ++ YD DV +L M P+ T+ +L
Sbjct: 341 HQMQAAG--CTPNANTYSVLLNLFGQSGRYD---DVRQLFLEMKS--SNTDPDAATYNIL 393
Query: 324 VECFTKYCVVREAIRHFRALI---------NFEGGIKALHNGGNYGD 361
+E F + +E + F ++ +EG I A GG + D
Sbjct: 394 IEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHED 440
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 121/282 (42%), Gaps = 11/282 (3%)
Query: 51 KKQPKDDDTALENGLRFSFMEELMNR-ARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVV 109
+K KD+ L+ L L+N AR + ++ +M+ + P +++ +V
Sbjct: 167 RKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVN 226
Query: 110 SYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFGSKGSATRGLEILAAME-KLNYD 168
Y G+ + A + + + AGL P T+ +L+ + + ++ M K
Sbjct: 227 GYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRR 286
Query: 169 IRQAWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDIS 228
A+ LI L + +++A +F+K T Y +LI+ C S AL++
Sbjct: 287 NEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLV 346
Query: 229 YEMEAAGRMATTFHFNCLL-SVQATCGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAY 287
EME G + L+ S+ + C + + +E G + P+ TYN +I Y
Sbjct: 347 KEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG---LMPNVITYNALINGY 403
Query: 288 TRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVECFTK 329
+ + DV EL+ + +++ PN +T+ L++ + K
Sbjct: 404 CKRGMIEDAVDVVELM-----ESRKLSPNTRTYNELIKGYCK 440
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 103/241 (42%), Gaps = 9/241 (3%)
Query: 86 SELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRL 145
++ + ++ AGL+P ++ L++ Y D +A G R + L+
Sbjct: 238 NQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHG 297
Query: 146 FGSKGSATRGLEILAAM-EKLNYDIRQAWLILIEELVRNKYLEDANKVFMKGSKGGLRAT 204
+++ M + + + + +LI+ L ++ +A + + + G++
Sbjct: 298 LCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPN 357
Query: 205 NEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFE 264
Y +LI+ C A ++ +M G M +N L++ G+ E A E
Sbjct: 358 IHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVE 417
Query: 265 NMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLV 324
ME + + P+T TYN +I+ Y ++ V +L M+E +++ P+V T+ L+
Sbjct: 418 LMESRK--LSPNTRTYNELIKGYCKS----NVHKAMGVLNKMLE--RKVLPDVVTYNSLI 469
Query: 325 E 325
+
Sbjct: 470 D 470
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 109/257 (42%), Gaps = 14/257 (5%)
Query: 77 ARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVH 136
R D I M G+ P +++ L+ + G+ + A + + G+ P
Sbjct: 400 CRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSV 459
Query: 137 ETFVALVRLFGSKGSATRGLEILAAMEKLNYDIRQ--AWLILIEELVRNKYLEDANKVFM 194
ET+ L+ +G K + +IL ME N + ++ LI L + L +A V
Sbjct: 460 ETYNILIGGYGRKYEFDKCFDILKEMED-NGTMPNVVSYGTLINCLCKGSKLLEAQIVKR 518
Query: 195 KGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCG 254
G+ IY++LI+ C G +A S EM G +N L+ + G
Sbjct: 519 DMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTG 578
Query: 255 IPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKR-- 312
+++ A +E +KPD TYN +I Y A + R +A + E+ KR
Sbjct: 579 --KLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRC--IA-----LYEEMKRSG 629
Query: 313 IQPNVKTHALLVECFTK 329
I+P +KT+ LL+ TK
Sbjct: 630 IKPTLKTYHLLISLCTK 646
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 101/249 (40%), Gaps = 14/249 (5%)
Query: 92 MIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFGSKGS 151
M A + P +F+ L+ G + A + L+ G P TF L + S
Sbjct: 275 MKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEK 334
Query: 152 ATRGLEI----LAAMEKLNYDIRQAWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEI 207
A L + + + K+N IL+ L + +E A ++ + GL I
Sbjct: 335 AEAALGVYETAVDSGVKMN---AYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVI 391
Query: 208 YDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENME 267
Y+ +I+ C+ GD A ME G +NCL ++ C + E+ A E +
Sbjct: 392 YNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCL--IRRFCELGEMENAEKEVNK 449
Query: 268 YGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVECF 327
+ P ETYN +I Y R +D+ D+ + + ED PNV ++ L+ C
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEM----ED-NGTMPNVVSYGTLINCL 504
Query: 328 TKYCVVREA 336
K + EA
Sbjct: 505 CKGSKLLEA 513
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 115/266 (43%), Gaps = 11/266 (4%)
Query: 80 RDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETF 139
R S AV+ L+ M+ G P +F L+ L+ A+ + + + G +P T+
Sbjct: 168 RISDAVA-LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 140 VALVRLFGSKGSATRGLEILAAMEK--LNYDIRQAWLILIEELVRNKYLEDANKVFMKGS 197
+V +G L +L MEK + D+ + +I+ L + K+++DA +F +
Sbjct: 227 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADV-VIYNTIIDGLCKYKHMDDALNLFTEMD 285
Query: 198 KGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPE 257
G+R Y LI C G S+A + +M F+ L+ G
Sbjct: 286 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 345
Query: 258 VAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNV 317
A ++ M + + PD TY+ +I + +DR+ + + +M+ K PNV
Sbjct: 346 EAEKLYDEMI--KRSIDPDIFTYSSLINGFCM---HDRLDEAKHMFELMIS--KDCFPNV 398
Query: 318 KTHALLVECFTKYCVVREAIRHFRAL 343
T++ L++ F K V E + FR +
Sbjct: 399 VTYSTLIKGFCKAKRVEEGMELFREM 424
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 105/263 (39%), Gaps = 11/263 (4%)
Query: 68 SFMEELMNRARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRE 127
S + L N R D+ S L+ DMI +NP +F L+ ++ G A
Sbjct: 298 SLISCLCNYGRWSDA---SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 354
Query: 128 LGAGLRPVHETFVALVRLFGSKGSATRGLEILAAM-EKLNYDIRQAWLILIEELVRNKYL 186
+ + P T+ +L+ F + M K + + LI+ + K +
Sbjct: 355 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRV 414
Query: 187 EDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCL 246
E+ ++F + S+ GL Y LI + D NA + +M + G +N L
Sbjct: 415 EEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 474
Query: 247 LSVQATCGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMM 306
L G A FE ++ M+PD TYN +I+ +A +V+D EL +
Sbjct: 475 LDGLCKNGKLAKAMVVFEYLQRST--MEPDIYTYNIMIEGMCKA---GKVEDGWELFCNL 529
Query: 307 VEDYKRIQPNVKTHALLVECFTK 329
K + PNV + ++ F +
Sbjct: 530 --SLKGVSPNVIAYNTMISGFCR 550
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 111/262 (42%), Gaps = 14/262 (5%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLF 146
+L ++M GL R++ L+ NG ++ + + G+ P T+ ++
Sbjct: 219 DLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQL 278
Query: 147 GSKGSATRGLEILAAMEKLNYDIR-QAWLILIEELVRNKYLEDANKVFMKGSKGGLRATN 205
G ++ M + + LI L R L +ANKV + G+
Sbjct: 279 CKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNL 338
Query: 206 EIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFEN 265
Y+ LI+ C VG AL + ++++ G + +N L+S G A +
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKE 398
Query: 266 MEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDV---AELLGMMVEDYKRIQPNVKTHAL 322
ME E +KP TY +I + R+++ ++ + E LG++ P+V T+++
Sbjct: 399 ME--ERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLV--------PDVHTYSV 448
Query: 323 LVECFTKYCVVREAIRHFRALI 344
L+ F + EA R F++++
Sbjct: 449 LIHGFCIKGQMNEASRLFKSMV 470
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 94/213 (44%), Gaps = 8/213 (3%)
Query: 132 LRPVHETFVALVRLFGSKGSATRGLEILAAMEKLNYD-IRQAWLILIEELVRNKYLEDAN 190
+ P T+ L+ + + L +L M++ + A+ LI L + K E AN
Sbjct: 405 VSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAAN 464
Query: 191 KVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQ 250
++F + + ++ +Y ++I+ K G S A+D+ EM+ G + +N L+S
Sbjct: 465 ELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGM 524
Query: 251 ATCGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDY 310
G+ A + ME E+ + D ++N ++ + R R ++ E + +
Sbjct: 525 VKAGMINEANSLLRKME--ENGCRADINSHNIILNGFARTGVPRRAIEMFETI-----KH 577
Query: 311 KRIQPNVKTHALLVECFTKYCVVREAIRHFRAL 343
I+P+ T+ L+ CF + EA R R +
Sbjct: 578 SGIKPDGVTYNTLLGCFAHAGMFEEAARMMREM 610
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 111/268 (41%), Gaps = 15/268 (5%)
Query: 80 RDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETF 139
R S AV+ L+ M+ G P +F L+ L+ A+ + + + G +P T+
Sbjct: 168 RISDAVA-LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 140 VALVRLFGSKGSATRGLEILAAME----KLNYDIRQAWLILIEELVRNKYLEDANKVFMK 195
+V +G L +L ME K N I +I+ L + +++E A +F +
Sbjct: 227 GTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNT---IIDSLCKYRHVEVAVDLFTE 283
Query: 196 GSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGI 255
G+R Y+ LI C G S+A + M FN L+ G
Sbjct: 284 METKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGK 343
Query: 256 PEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQP 315
A E M + + PDT TYN +I + ++R+ + ++ MV K P
Sbjct: 344 LVEAEKLHEEMI--QRSIDPDTITYNLLINGFCM---HNRLDEAKQMFKFMVS--KDCLP 396
Query: 316 NVKTHALLVECFTKYCVVREAIRHFRAL 343
N++T+ L+ F K V + + FR +
Sbjct: 397 NIQTYNTLINGFCKCKRVEDGVELFREM 424
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 131/305 (42%), Gaps = 18/305 (5%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLF 146
+L+ +M++ GL P +++ ++ G A + +R G P ++ L+R
Sbjct: 249 KLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRAL 308
Query: 147 GSKGSATRGLEILAAM--EKLNYDIRQAWLILIEELVRNKYLEDANKVFMKGSKGGLRAT 204
++G G +++ M EK + ++ + ILI L R+ +E+A + + GL
Sbjct: 309 LNQGKWEEGEKLMTKMFSEKCDPNV-VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPD 367
Query: 205 NEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFE 264
YD LI C+ G A++ M + G + ++N +L+ G + A F
Sbjct: 368 AYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFG 427
Query: 265 NMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLV 324
+ GE P++ +YN + A S D+++ + +L MM I P+ T+ ++
Sbjct: 428 KL--GEVGCSPNSSSYNTMFSAL--WSSGDKIRALHMILEMMSNG---IDPDEITYNSMI 480
Query: 325 ECFTKYCVVREAIRHFRALINFEGGIKALHNGGNYGDPLSLYLRALCREGRIVELLEALE 384
C + +V EA + + E + ++ L C+ RI + + LE
Sbjct: 481 SCLCREGMVDEAFELLVDMRSCEFHPSVV--------TYNIVLLGFCKAHRIEDAINVLE 532
Query: 385 AMAKD 389
+M +
Sbjct: 533 SMVGN 537
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 93/218 (42%), Gaps = 15/218 (6%)
Query: 172 AWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEM 231
+ I+I L L+ A KV + + T Y +LIE G AL + EM
Sbjct: 195 TYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEM 254
Query: 232 EAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAE 291
+ G F +N ++ G+ + AF N+E +PD +YN +++A
Sbjct: 255 LSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKG--CEPDVISYNILLRALLNQG 312
Query: 292 SYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVECFTKYCVVREAIRHFRALINFEGGIK 351
++ + +L+ M + + PNV T+++L+ + + EA+ + + K
Sbjct: 313 KWEEGE---KLMTKMFSE--KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKE-----K 362
Query: 352 ALHNGGNYGDPLSLYLRALCREGRIVELLEALEAMAKD 389
L DPL + A CREGR+ +E LE M D
Sbjct: 363 GLTPDAYSYDPL---IAAFCREGRLDVAIEFLETMISD 397
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 126/302 (41%), Gaps = 15/302 (4%)
Query: 68 SFMEELMNRARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRE 127
S + L N R D+ S L+ DMI +NP +F L+ ++ G A
Sbjct: 296 SLIRCLCNYGRWSDA---SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 128 LGAGLRPVHETFVALVRLFGSKGSATRGLEILAAM-EKLNYDIRQAWLILIEELVRNKYL 186
+ + P T+ +L+ F + M K + + LI+ + K +
Sbjct: 353 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 412
Query: 187 EDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCL 246
++ ++F + S+ GL Y LI + + NA + +M + G + ++ L
Sbjct: 413 DEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSIL 472
Query: 247 LSVQATCGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMM 306
L G E A FE ++ + M+PD TYN +I+ +A +V+D +L +
Sbjct: 473 LDGLCNNGKVETALVVFEYLQRSK--MEPDIYTYNIMIEGMCKA---GKVEDGWDLFCSL 527
Query: 307 VEDYKRIQPNVKTHALLVECFTKYCVVREAIRHFRALINFEGGIKALHNGGNYGDPLSLY 366
K ++PNV T+ ++ F + + EA FR + EG L + G Y + +
Sbjct: 528 --SLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKE-EG---PLPDSGTYNTLIRAH 581
Query: 367 LR 368
LR
Sbjct: 582 LR 583
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 125/315 (39%), Gaps = 27/315 (8%)
Query: 91 DMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFGSKG 150
+M+ GL P ++ L+ S G+ AM+ L + GL P T+ LV F KG
Sbjct: 335 EMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKG 394
Query: 151 SATRGLEILAAMEKLNYDIRQA-WLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYD 209
+L M + + LI +EDA V + GL Y
Sbjct: 395 YMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYS 454
Query: 210 LLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYG 269
++ C+ D AL + EM G T ++ L +Q C T E +
Sbjct: 455 TVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL--IQGFCEQRR----TKEACDLY 508
Query: 270 EDFMK----PDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVE 325
E+ ++ PD TY +I AY ++ +L MVE K + P+V T+++L+
Sbjct: 509 EEMLRVGLPPDEFTYTALINAYCMEGDLEK---ALQLHNEMVE--KGVLPDVVTYSVLIN 563
Query: 326 CFTKYCVVREAIRHFRALINFEGGIKA-------LHNGGN--YGDPLSLYLRALCREGRI 376
K REA R L +E + + + N N + +SL ++ C +G +
Sbjct: 564 GLNKQSRTREAKRLLLKLF-YEESVPSDVTYHTLIENCSNIEFKSVVSL-IKGFCMKGMM 621
Query: 377 VELLEALEAMAKDNH 391
E + E+M NH
Sbjct: 622 TEADQVFESMLGKNH 636
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 117/294 (39%), Gaps = 45/294 (15%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNG--DE--------------------------- 117
+++ +M+ G +P +++ L+ +YA +G DE
Sbjct: 335 KVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGF 394
Query: 118 ------QAAMDSLRRELGAGLRPVHETFVALVRLFGSKGSATRGLEILAAME--KLNYDI 169
++AM AG +P TF A ++++G++G T ++I + L+ DI
Sbjct: 395 ERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDI 454
Query: 170 RQAWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISY 229
W L+ +N + + VF + + G E ++ LI + G A+ +
Sbjct: 455 -VTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYR 513
Query: 230 EMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTR 289
M AG +N +L+ A G+ E + ME G KP+ TY ++ AY
Sbjct: 514 RMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGR--CKPNELTYCSLLHAYAN 571
Query: 290 AESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVECFTKYCVVREAIRHFRAL 343
+ + +AE + V I+P LV +K ++ EA R F L
Sbjct: 572 GKEIGLMHSLAEEVYSGV-----IEPRAVLLKTLVLVCSKCDLLPEAERAFSEL 620
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 111/264 (42%), Gaps = 11/264 (4%)
Query: 57 DDTALENGLRFSFMEELMNRARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGD 116
DD ++ ++ M +L + R D A LI M + + +F L+ Y G
Sbjct: 144 DDYDHKSPHPYNEMIDLSGKVRQFDLAW--HLIDLMKSRNVEISIETFTILIRRYVRAGL 201
Query: 117 EQAAMDSLRRELGAGLRPVHETFVALVRLFGSKGSATRGLEILAAM-EKLNYDIRQAWLI 175
A+ R G P F ++ K A+ ++ ++ D+ +
Sbjct: 202 ASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDV-IVYTN 260
Query: 176 LIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAG 235
L+ R + +A KVF + G+ Y ++I+ C+ G S A D+ +M +G
Sbjct: 261 LVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSG 320
Query: 236 RMATTFHFNCLLSVQATCGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDR 295
FN L+ V G E + M+ + +PDT TYN++I+A+ R E+
Sbjct: 321 CAPNAITFNNLMRVHVKAGRTEKVLQVYNQMK--KLGCEPDTITYNFLIEAHCRDEN--- 375
Query: 296 VQDVAELLGMMVEDYKRIQPNVKT 319
+++ ++L M++ K+ + N T
Sbjct: 376 LENAVKVLNTMIK--KKCEVNAST 397
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 101/241 (41%), Gaps = 10/241 (4%)
Query: 91 DMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFGSKG 150
+++ A L P F LV + + A + G+ P + L+ G
Sbjct: 294 EILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSG 353
Query: 151 SATRGLEILAAMEKLNY--DIRQAWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIY 208
+ + +L+ ME LN D+ + ILI L + +AN++F K + ++ Y
Sbjct: 354 NMLEAVGLLSEMESLNLSPDVF-TYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATY 412
Query: 209 DLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEY 268
+ LI CK + ALD+ EM A+G F+ L + C + ++ A E
Sbjct: 413 NSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTL--IDGYCNVRDIKAAMGLYFEM 470
Query: 269 GEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVECFT 328
+ PD TY +I A+ + + +++ L M+E I PN T A LV+ F
Sbjct: 471 TIKGIVPDVVTYTALIDAHFKEAN---MKEALRLYSDMLE--AGIHPNDHTFACLVDGFW 525
Query: 329 K 329
K
Sbjct: 526 K 526
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 100/230 (43%), Gaps = 11/230 (4%)
Query: 99 PGPRSFHGLVVSYALNG---DEQAAMDSLRRELGAGLRPVHETFVALVRLFGSKGSATRG 155
P R + L+ Y NG D ++++RR+ P T+ +V F + G R
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 156 LEILAAMEKLNYDI-RQAWLILIEELVRNKYLEDANKVFMKGSK-GGLRATNEIYDLLIE 213
++LA M ++ R + +L++ + ++ A + + ++ G+ Y+++I+
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531
Query: 214 EDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYGEDFM 273
+ D + AL EM G T + L+ A G P++A F+ M + +
Sbjct: 532 GCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEM-MNDPRV 590
Query: 274 KPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALL 323
K D +N +++ Y R ++D ++ M E+ PNV T+ L
Sbjct: 591 KVDLIAWNMLVEGYCR---LGLIEDAQRVVSRMKEN--GFYPNVATYGSL 635
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 115/293 (39%), Gaps = 23/293 (7%)
Query: 99 PGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFGSKGSATRGLEI 158
P R F L+ + G A + L + AGL P F L+ + G ++
Sbjct: 234 PNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDL 293
Query: 159 LAAMEKLNYDIR-QAWLILIEELVRN-KYLEDANKVFMKGSKGGLRATNEIYDLLIEEDC 216
+ M K ++ + +LI+ L R K +++A +VF++ + G A Y LI C
Sbjct: 294 MNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFC 353
Query: 217 KVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYGEDFMKPD 276
K G + +M G M + + ++ E E M+ PD
Sbjct: 354 KWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMK--RRGCHPD 411
Query: 277 TETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVECFTKYCVVREA 336
YN VI+ A V++ L M + + P V T +++ FT + EA
Sbjct: 412 LLIYNVVIRL---ACKLGEVKEAVRLWNEM--EANGLSPGVDTFVIMINGFTSQGFLIEA 466
Query: 337 IRHFRALINFEGGIKALHNGGNYGDPLSLYLRALCREGRIVELLEALEAMAKD 389
HF+ +++ + + + YG SL L L R+ ++ MAKD
Sbjct: 467 CNHFKEMVS-----RGIFSAPQYGTLKSL-LNNLVRDDKL--------EMAKD 505
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 82/194 (42%), Gaps = 16/194 (8%)
Query: 102 RSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFGSKGSATRGLEILAA 161
+ FHG +YAL +RR + GL+P T+ LV + S G E L
Sbjct: 196 KMFHG---AYAL----------IRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDE 242
Query: 162 MEKLNYDI-RQAWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGD 220
M + ++ + +LIE L+ YLE A ++ K +KGG + +++LIE K G+
Sbjct: 243 MSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGE 302
Query: 221 HSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYGEDFMKPDTETY 280
+++ Y G + L+ + G + AF N ED KP Y
Sbjct: 303 VEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCV--EDGHKPFPSLY 360
Query: 281 NWVIQAYTRAESYD 294
+I+ R +D
Sbjct: 361 APIIKGMCRNGMFD 374
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 115/270 (42%), Gaps = 14/270 (5%)
Query: 65 LRFSFMEELMNRARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSL 124
+ +S + + + R+ DS + L ++ L + + +++ +A +GD A+ L
Sbjct: 233 VNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLL 292
Query: 125 RRELGAGLRPVHETFVALVRLFGSKGSATRGLEILAAMEKLNYD-IR---QAWLILIEEL 180
GL T V+++ G R LE A E+L I+ +A+ L++
Sbjct: 293 GMAQATGLSAKTATLVSIISALADSG---RTLEAEALFEELRQSGIKPRTRAYNALLKGY 349
Query: 181 VRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATT 240
V+ L+DA + + K G+ Y LLI+ G +A + EMEA +
Sbjct: 350 VKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNS 409
Query: 241 FHFNCLLSVQATCGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVA 300
F F+ LL+ G + F + M+ +KPD + YN VI + + D
Sbjct: 410 FVFSRLLAGFRDRGEWQKTFQVLKEMK--SIGVKPDRQFYNVVIDTFGKFNCLDHAMTTF 467
Query: 301 ELLGMMVEDYKRIQPNVKTHALLVECFTKY 330
+ M+ E I+P+ T L++C K+
Sbjct: 468 D--RMLSEG---IEPDRVTWNTLIDCHCKH 492
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 43/251 (17%)
Query: 88 LIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFG 147
++ +M G++P ++ L+ +Y G ++A L+ ++P F L+ F
Sbjct: 361 MVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFR 420
Query: 148 SKGSATRGLEILAAMEKLNYDI-RQAWLILIEELVRNKYLEDANKVFMKGSKGGLRATNE 206
+G + ++L M+ + RQ + ++I+ + L+ A F + G+
Sbjct: 421 DRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRV 480
Query: 207 IYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENM 266
++ LI+ CK G H A ++ ME G CL
Sbjct: 481 TWNTLIDCHCKHGRHIVAEEMFEAMERRG---------CL-------------------- 511
Query: 267 EYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVEC 326
P TYN +I +Y E +D D+ LLG M + I PNV TH LV+
Sbjct: 512 --------PCATTYNIMINSYGDQERWD---DMKRLLGKMKS--QGILPNVVTHTTLVDV 558
Query: 327 FTKYCVVREAI 337
+ K +AI
Sbjct: 559 YGKSGRFNDAI 569
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 114/266 (42%), Gaps = 11/266 (4%)
Query: 80 RDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETF 139
R S AV+ L+ M+ P + L+ L G A+ + R + G +P T+
Sbjct: 155 RVSEAVA-LVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY 213
Query: 140 VALVRLFGSKGSATRGLEILAAMEKLNYDIRQA-WLILIEELVRNKYLEDANKVFMKGSK 198
++ G++ L++ ME+ N + I+I+ L ++ +DA +F +
Sbjct: 214 GPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEM 273
Query: 199 GGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCG-IPE 257
G++A Y LI C G + + EM + F+ L+ V G + E
Sbjct: 274 KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE 333
Query: 258 VAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNV 317
E + G + PDT TYN +I + + + + ++ +MV K +P++
Sbjct: 334 AKELYNEMITRG---IAPDTITYNSLIDGFCKENC---LHEANQMFDLMVS--KGCEPDI 385
Query: 318 KTHALLVECFTKYCVVREAIRHFRAL 343
T+++L+ + K V + +R FR +
Sbjct: 386 VTYSILINSYCKAKRVDDGMRLFREI 411
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 116/270 (42%), Gaps = 23/270 (8%)
Query: 59 TALENGLRFSFMEELMNRARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQ 118
TAL NGL N +R D+A L+ DMI + P ++ L+ ++ NG
Sbjct: 229 TALVNGL--------CNSSRWSDAA---RLLSDMIKKKITPNVITYSALLDAFVKNGKVL 277
Query: 119 AAMDSLRRELGAGLRPVHETFVALVR---LFGSKGSATRGLEILAAMEKLNYDIRQAWLI 175
A + + + P T+ +L+ L A + +++ + L + ++
Sbjct: 278 EAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVV--SYNT 335
Query: 176 LIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAG 235
LI + K +ED K+F + S+ GL + Y+ LI+ + GD A + +M+ G
Sbjct: 336 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 395
Query: 236 RMATTFHFNCLLSVQATCGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDR 295
+ +N LL G E A FE+M+ E M D TY VI+ + +
Sbjct: 396 ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE--MDLDIVTYTTVIRGMCKT---GK 450
Query: 296 VQDVAELLGMMVEDYKRIQPNVKTHALLVE 325
V++ L + K ++P++ T+ ++
Sbjct: 451 VEEAWSLFCSL--SLKGLKPDIVTYTTMMS 478
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 92/217 (42%), Gaps = 9/217 (4%)
Query: 77 ARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGA-GLRPV 135
A N S I M G +P + L+ SY+ GD + A D L E+ + GL P
Sbjct: 248 ASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKA-DELMTEMKSIGLVPN 306
Query: 136 HETFVALVRLFGSKGSATRGLEILAAMEKLNY-DIRQAWLILIEELVRNKYLEDANKVF- 193
L++++ G R E+L+ +E Y + + +L++ L + LE+A +F
Sbjct: 307 KVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFD 366
Query: 194 -MKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQAT 252
MKG G+R+ ++I C+ A ++S + E N +L
Sbjct: 367 DMKGK--GVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCR 424
Query: 253 CGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTR 289
G E + M+ E + PD T++ +I+ + +
Sbjct: 425 AGEMESVMRMMKKMD--EQAVSPDYNTFHILIKYFIK 459
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 112/266 (42%), Gaps = 9/266 (3%)
Query: 79 NRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHET 138
NR S AV+ L+ M+ G P +F L+ L+ A+ + R + G +P T
Sbjct: 162 NRISDAVA-LVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVT 220
Query: 139 FVALVRLFGSKGSATRGLEILAAMEKLNYDIRQA-WLILIEELVRNKYLEDANKVFMKGS 197
+ A+V +G L +L ME + + +I+ L + ++ +DA +F +
Sbjct: 221 YGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 280
Query: 198 KGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPE 257
G+R Y LI C G S+A + +M F+ L+ G
Sbjct: 281 NKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLV 340
Query: 258 VAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNV 317
A +E M + + P+ TY+ +I + DR+ + ++L +M+ K PNV
Sbjct: 341 KAEKLYEEMI--KRSIDPNIFTYSSLINGFCM---LDRLGEAKQMLELMIR--KDCLPNV 393
Query: 318 KTHALLVECFTKYCVVREAIRHFRAL 343
T+ L+ F K V + + FR +
Sbjct: 394 VTYNTLINGFCKAKRVDKGMELFREM 419
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 94/227 (41%), Gaps = 10/227 (4%)
Query: 68 SFMEELMNRARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRE 127
+ + L N R D+A L+ DM+ ++P F L+ ++ G+ A + +
Sbjct: 224 TLISGLSNSGRWTDAA---RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEM 280
Query: 128 LGAGLRPVHETFVALVRLF---GSKGSATRGLEILAAMEKLNYDIRQAWLILIEELVRNK 184
+ + P T+ +L+ F G G A +++ + K + + LI ++K
Sbjct: 281 IRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS--KGCFPDVVTYNTLITGFCKSK 338
Query: 185 YLEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFN 244
+ED K+F + + GL Y+ LI C+ G + A + M G +N
Sbjct: 339 RVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYN 398
Query: 245 CLLSVQATCGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAE 291
LL G E A E+++ E M D TYN +IQ R +
Sbjct: 399 ILLDCLCNNGKIEKALVMVEDLQKSE--MDVDIITYNIIIQGLCRTD 443
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 5/221 (2%)
Query: 68 SFMEELMNRARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRE 127
S + L N R RD+ L+ M + P +F+ L+ ++ G A +
Sbjct: 217 SLVNGLCNSGRWRDA---DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM 273
Query: 128 LGAGLRPVHETFVALVRLFGSKGSATRGLEILAAME-KLNYDIRQAWLILIEELVRNKYL 186
+ + P T+ +L+ F +G ++ ME K + A+ LI + K +
Sbjct: 274 IRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKV 333
Query: 187 EDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCL 246
+DA K+F + S+ GL Y LI+ +VG + A ++ M + G +N L
Sbjct: 334 DDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVL 393
Query: 247 LSVQATCGIPEVAFATFENMEYGE-DFMKPDTETYNWVIQA 286
L G + A FE+M+ E D + P+ TYN ++
Sbjct: 394 LHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHG 434
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 107/255 (41%), Gaps = 16/255 (6%)
Query: 92 MIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFGSKGS 151
M+ GL P +F+ L+ L G A + + +G GL T+ +V G
Sbjct: 217 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 276
Query: 152 ATRGLEILAAMEKLNYDIRQAWLI---LIEELVRNKYLEDANKVFMKGSKGGLRATNEIY 208
L +L+ ME+ + I+ +I +I+ L ++ + DA +F + + G+ Y
Sbjct: 277 TKSALNLLSKMEETH--IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTY 334
Query: 209 DLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEY 268
+ +I+ C G S+A + +M FN L+S G A + M +
Sbjct: 335 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 394
Query: 269 GEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVECFT 328
F PDT TYN +I + + +D + + +L+ P+V T +++ +
Sbjct: 395 RCIF--PDTVTYNSMIYGFCKHNRFDDAKHMFDLMA---------SPDVVTFNTIIDVYC 443
Query: 329 KYCVVREAIRHFRAL 343
+ V E ++ R +
Sbjct: 444 RAKRVDEGMQLLREI 458
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 106/259 (40%), Gaps = 20/259 (7%)
Query: 92 MIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALV-RLFGSKG 150
M+ G P P+ F+ LV +Y +GD A L++ + G P + + L+ + G K
Sbjct: 363 MMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKD 422
Query: 151 SATRGLEILAAMEKLNYDIRQAWLIL----IEELVR-----NKYLEDANKVFMKGSKGGL 201
S L LA EK ++ A ++L + R KY E A V + G
Sbjct: 423 SLNCDLLDLA--EKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY-EKAFSVIREMIGQGF 479
Query: 202 RATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFA 261
Y ++ C A + EM+ G +A + + ++ G+ E A
Sbjct: 480 IPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK 539
Query: 262 TFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHA 321
F M E P+ TY +I AY +A+ +V EL M+ + PN+ T++
Sbjct: 540 WFNEMR--EVGCTPNVVTYTALIHAYLKAK---KVSYANELFETMLSE--GCLPNIVTYS 592
Query: 322 LLVECFTKYCVVREAIRHF 340
L++ K V +A + F
Sbjct: 593 ALIDGHCKAGQVEKACQIF 611
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 105/256 (41%), Gaps = 11/256 (4%)
Query: 92 MIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFGSKGS 151
M + G P + ++ +Y G+ A+ R R TF L+R++G G+
Sbjct: 236 MSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGN 295
Query: 152 ATRGLEILAAMEKLNYDIRQAWLI---LIEELVRNKYLEDANKVFMKGSKGGLRATNEIY 208
L I M+ L ++ +I LI+ + R K A ++ G Y
Sbjct: 296 YDGCLNIYEEMKALG--VKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTY 353
Query: 209 DLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEY 268
L+ + +AL I EM+ G T +N LLS+ A + AF F++M+
Sbjct: 354 AALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKN 413
Query: 269 GEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVECFT 328
E PD+ T++ +I Y + RV + L M E +P + +++C+
Sbjct: 414 CET-CDPDSWTFSSLITVYACS---GRVSEAEAALLQMRE--AGFEPTLFVLTSVIQCYG 467
Query: 329 KYCVVREAIRHFRALI 344
K V + +R F ++
Sbjct: 468 KAKQVDDVVRTFDQVL 483
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 131/305 (42%), Gaps = 35/305 (11%)
Query: 96 GLNPGPRSFHGLVVSYALNGDE--QAA--MDSLRRELGAGLRPVHETFVALVRLFGSKG- 150
GL P +++ ++ + G E Q A D ++R G++P TF +L+ + G
Sbjct: 298 GLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN---GVQPDRITFNSLLAVCSRGGL 354
Query: 151 -SATRGLEILAAMEKLNYDIRQAWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYD 209
A R L ++ D+ ++ L++ + + ++ A ++ + + Y
Sbjct: 355 WEAARNLFDEMTNRRIEQDVF-SYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 210 LLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYG 269
+I+ K G AL++ EM G +N LLS+ G E A M
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREM--A 471
Query: 270 EDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKR--IQPNVKTHALLVECF 327
+K D TYN ++ Y + YD V+ V + KR + PN+ T++ L++ +
Sbjct: 472 SVGIKKDVVTYNALLGGYGKQGKYDEVKKV-------FTEMKREHVLPNLLTYSTLIDGY 524
Query: 328 TKYCVVREAIRHFRALINFEGGIKALHNGGNYGDPLSLY---LRALCREGRIVELLEALE 384
+K + +EA+ FR + G++A + LY + ALC+ G + + ++
Sbjct: 525 SKGGLYKEAMEIFREFKS--AGLRA---------DVVLYSALIDALCKNGLVGSAVSLID 573
Query: 385 AMAKD 389
M K+
Sbjct: 574 EMTKE 578
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 110/260 (42%), Gaps = 8/260 (3%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLF 146
+L+ DM+ G +P +F+ L+ G A+D L + G +P ++ L+ F
Sbjct: 330 KLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGF 389
Query: 147 GSKGSATRGLEILAAM-EKLNYDIRQAWLILIEELVRNKYLEDANKVFMKGSKGGLRATN 205
+ R +E L M + Y + ++ L ++ +EDA ++ + S G
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVL 449
Query: 206 EIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFEN 265
Y+ +I+ K G A+ + EM A T ++ L+ + G + A F
Sbjct: 450 ITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFH- 508
Query: 266 MEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVE 325
E+ ++P+ T+N ++ ++ DR D L M+ + +PN ++ +L+E
Sbjct: 509 -EFERMGIRPNAVTFNSIMLGLCKSRQTDRAID---FLVFMIN--RGCKPNETSYTILIE 562
Query: 326 CFTKYCVVREAIRHFRALIN 345
+ +EA+ L N
Sbjct: 563 GLAYEGMAKEALELLNELCN 582
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 103/265 (38%), Gaps = 41/265 (15%)
Query: 79 NRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHET 138
NR S AV+ L+ M+ G P +F LV + A+ + R + G +P T
Sbjct: 159 NRISEAVA-LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVT 217
Query: 139 FVALVRLFGSKGSATRGLEILAAMEKLNYDIRQAWLILIEELVRNKYLEDANKVFMKGSK 198
+ A++ +G L +L MEK
Sbjct: 218 YGAVINGLCKRGEPDLALNLLNKMEK---------------------------------- 243
Query: 199 GGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEV 258
G + A IY+ +I+ CK +A D+ +ME G F +N L+S G
Sbjct: 244 GKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSD 303
Query: 259 AFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVK 318
A +M E + PD +N +I A+ + ++ + +L MV+ K P+V
Sbjct: 304 ASRLLSDML--EKNINPDLVFFNALIDAFVKE---GKLVEAEKLYDEMVKS-KHCFPDVV 357
Query: 319 THALLVECFTKYCVVREAIRHFRAL 343
+ L++ F KY V E + FR +
Sbjct: 358 AYNTLIKGFCKYKRVEEGMEVFREM 382
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 100/229 (43%), Gaps = 7/229 (3%)
Query: 67 FSFMEELMNRARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRR 126
+S + + + + RN D+A L+++M++ G+N P + + + G + A
Sbjct: 315 YSLLIDGLLKGRNADAA--KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDG 372
Query: 127 ELGAGLRPVHETFVALVRLFGSKGSATRGLEILAAMEKLNYDIR-QAWLILIEELVRNKY 185
+ +GL P + + +L+ + + + +G E+L M+K N I + +++ + +
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGD 432
Query: 186 LEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNC 245
L+ A + + G R IY LI+ + +A+ + EM+ G F +N
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS 492
Query: 246 L-LSVQATCGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESY 293
L + + + E E +E G +KP+ TY I Y A +
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENG---LKPNAFTYGAFISGYIEASEF 538
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 108/259 (41%), Gaps = 24/259 (9%)
Query: 92 MIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFGSKGS 151
M+ GL P +F+ L+ L G A + + +G GL T+ +V G
Sbjct: 217 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 276
Query: 152 ATRGLEILAAMEKLNYDIRQAWLI---LIEELVRNKYLEDANKVFMKGSKGGLRATNEIY 208
L +L+ ME+ + I+ +I +I+ L ++ + DA +F + + G+ Y
Sbjct: 277 TKSALNLLSKMEETH--IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTY 334
Query: 209 DLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEY 268
+ +I+ C G S+A + +M FN L+S G FE +
Sbjct: 335 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG------KLFEAEKL 388
Query: 269 GEDFMK----PDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLV 324
++ + PDT TYN +I + + +D + + +L+ P+V T ++
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA---------SPDVVTFNTII 439
Query: 325 ECFTKYCVVREAIRHFRAL 343
+ + + V E ++ R +
Sbjct: 440 DVYCRAKRVDEGMQLLREI 458
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 81/195 (41%), Gaps = 37/195 (18%)
Query: 208 YDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCG---IPEVAFATFE 264
Y +L++ CK+G A ++ EM A G T FNCL+S A C IPE A F
Sbjct: 427 YTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLIS--AFCKEHRIPE-AVEIFR 483
Query: 265 NMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLV 324
M KPD T+N +I D ++ LL M+ + + N T+ L+
Sbjct: 484 EMP--RKGCKPDVYTFNSLISGLCEV---DEIKHALWLLRDMISE--GVVANTVTYNTLI 536
Query: 325 ECFTKYCVVREAIRHFRALIN---FEGGIKALHNGGNYGDPL-----SLYLRALCREGRI 376
F + R I+ R L+N F+ G PL + ++ LCR G +
Sbjct: 537 NAFLR----RGEIKEARKLVNEMVFQ------------GSPLDEITYNSLIKGLCRAGEV 580
Query: 377 VELLEALEAMAKDNH 391
+ E M +D H
Sbjct: 581 DKARSLFEKMLRDGH 595
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 102/244 (41%), Gaps = 10/244 (4%)
Query: 84 AVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALV 143
A+ E+ + M +G+ +F L+ A G A + ++P F AL+
Sbjct: 520 AMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALI 579
Query: 144 RLFGSKGSATRGLEILAAMEKLNYDIRQAWL---ILIEELVRNKYLEDANKVFMKGSKGG 200
G G+ R ++LA M+ + I + L++ +E A +V+ K G
Sbjct: 580 SACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYG 639
Query: 201 LRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAF 260
+R T E+Y + + K GD A I +M+ F+ L+ V + + AF
Sbjct: 640 IRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAF 699
Query: 261 ATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTH 320
++ + ++ T +Y+ ++ A A+ + + ++ E + + +++P + T
Sbjct: 700 GILQDAK--SQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSI-----KLRPTISTM 752
Query: 321 ALLV 324
L+
Sbjct: 753 NALI 756
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 113/277 (40%), Gaps = 11/277 (3%)
Query: 68 SFMEELMNRARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRE 127
S + L N R D+ S L+ DMI +NP +F+ L+ ++ G A
Sbjct: 300 SLISCLCNYERWSDA---SRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356
Query: 128 LGAGLRPVHETFVALVRLFGSKGSATRGLEILAAM-EKLNYDIRQAWLILIEELVRNKYL 186
+ + P T+ +L+ F + M K + + LI + K +
Sbjct: 357 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRI 416
Query: 187 EDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCL 246
++ ++F + S+ GL Y LI + D NA + +M + G +N L
Sbjct: 417 DEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTL 476
Query: 247 LSVQATCGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMM 306
L G E A FE ++ + M+P TYN +I+ +A +V+D +L +
Sbjct: 477 LDGLCKNGKLEKAMVVFEYLQRSK--MEPTIYTYNIMIEGMCKA---GKVEDGWDLFCSL 531
Query: 307 VEDYKRIQPNVKTHALLVECFTKYCVVREAIRHFRAL 343
K ++P+V + ++ F + + EA FR +
Sbjct: 532 --SLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 107/265 (40%), Gaps = 9/265 (3%)
Query: 80 RDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETF 139
R S AV+ L+ M+ G P +F L+ L+ A+ + R + G +P T+
Sbjct: 170 RISDAVA-LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 140 VALVRLFGSKGSATRGLEILAAMEKLNYDIRQA-WLILIEELVRNKYLEDANKVFMKGSK 198
+V +G +L ME + + +I+ L + ++ +DA +F +
Sbjct: 229 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 288
Query: 199 GGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEV 258
G+R Y LI C S+A + +M FN L+ G
Sbjct: 289 KGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVE 348
Query: 259 AFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVK 318
A ++ M + + PD TY+ +I + +DR+ + + +M+ K PNV
Sbjct: 349 AEKLYDEMI--KRSIDPDIFTYSSLINGFCM---HDRLDEAKHMFELMIS--KDCFPNVV 401
Query: 319 THALLVECFTKYCVVREAIRHFRAL 343
T+ L+ F K + E + FR +
Sbjct: 402 TYNTLINGFCKAKRIDEGVELFREM 426
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 17/161 (10%)
Query: 186 LEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVG---DHSNALDISYEMEAAGRMATTFH 242
L+ A K+F K + G + T ++ LI+ K+G + S LD+ E M
Sbjct: 405 LDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDE----MLQPND 460
Query: 243 FNCLLSVQATCG---IPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDV 299
C + VQA C I E ++ YG +KPD T+N + +AY R S +D+
Sbjct: 461 RTCNILVQAWCNQRKIEEAWNIVYKMQSYG---VKPDVVTFNTLAKAYARIGSTCTAEDM 517
Query: 300 AELLGMMVEDYKRIQPNVKTHALLVECFTKYCVVREAIRHF 340
++ M+ + +++PNV+T +V + + + EA+R F
Sbjct: 518 --IIPRML--HNKVKPNVRTCGTIVNGYCEEGKMEEALRFF 554
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 129/296 (43%), Gaps = 22/296 (7%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLF 146
E+ M+ +G+ S +V G+ + + ++ G++P T+ ++ +
Sbjct: 210 EIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAY 269
Query: 147 GSKGSATRGLE-ILAAMEK--LNYDIRQAWLILIEELVRNKYLEDANKVFMKGSKGGLRA 203
K G+E +L M+K + Y+ + + +L+E V+N + DA K+F + + G+ +
Sbjct: 270 -VKQRDFSGVEGVLKVMKKDGVVYN-KVTYTLLMELSVKNGKMSDAEKLFDEMRERGIES 327
Query: 204 TNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATF 263
+Y LI +C+ G+ A + E+ G +++ + L + C + E+ A
Sbjct: 328 DVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGAL--IDGVCKVGEMGAAEI 385
Query: 264 ENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALL 323
E + +N +I Y R D + +++ + K Q +V T +
Sbjct: 386 LMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVM-----EQKGFQADVFTCNTI 440
Query: 324 VECFTKYCVVREAIR-HFRALINFEGGIKALHNGGNYGDPLSLYLRALCREGRIVE 378
CF + EA + FR + EGG+K + +Y + + +Y C+EG + E
Sbjct: 441 ASCFNRLKRYDEAKQWLFRMM---EGGVKL--STVSYTNLIDVY----CKEGNVEE 487
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 80/182 (43%), Gaps = 3/182 (1%)
Query: 63 NGLRFSFMEELMNRARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMD 122
N + +S + ++ R D+A + +M+ GL ++ L+ + GD AA
Sbjct: 401 NDVTYSILIDMFCRRGKLDTAL--SFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEG 458
Query: 123 SLRRELGAGLRPVHETFVALVRLFGSKGSATRGLEILAAME-KLNYDIRQAWLILIEELV 181
+ + L P T+ +L+ + SKG + L + M K + L+ L
Sbjct: 459 FMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLF 518
Query: 182 RNKYLEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTF 241
R + DA K+F + ++ ++ Y+++IE C+ GD S A + EM G + T+
Sbjct: 519 RAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTY 578
Query: 242 HF 243
+
Sbjct: 579 SY 580
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 8/202 (3%)
Query: 137 ETFVALVRLFGSKGSATRGLEILAAM-EKLNYDIRQAWLILIEELVRNKYLEDANKVFMK 195
+++++++ G +E+L+ + EK + + L + K + + +F K
Sbjct: 408 DSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEK 467
Query: 196 GSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGI 255
K G Y++LI +VG+ A++I E+E + +N L++ G
Sbjct: 468 MKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGD 527
Query: 256 PEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQP 315
+ A F+ M+ E + PD TY+ +++ + + E RV+ L M+ K QP
Sbjct: 528 VDEAHVRFKEMQ--EKGLNPDVVTYSTLMECFGKTE---RVEMAYSLFEEML--VKGCQP 580
Query: 316 NVKTHALLVECFTKYCVVREAI 337
N+ T+ +L++C K EA+
Sbjct: 581 NIVTYNILLDCLEKNGRTAEAV 602
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 6/215 (2%)
Query: 88 LIYDMIAAGLN-PGPRSFHGLVVSYALNGDEQAAMDS-LRRELGAGLRPVHETFVALVRL 145
++ DMI G + P + + ++ SY NG M+S R G++P TF L+
Sbjct: 272 VLADMIEDGDSLPDVCTLNSIIGSYG-NGRNMRKMESWYSRFQLMGVQPDITTFNILILS 330
Query: 146 FGSKGSATRGLEILAAMEKLNYDIRQA-WLILIEELVRNKYLEDANKVFMKGSKGGLRAT 204
FG G + ++ MEK + + + I+IE + +E + VF K G++
Sbjct: 331 FGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPN 390
Query: 205 NEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFE 264
+ Y L+ K G + ++ + + T FNC+++ G +
Sbjct: 391 SITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYI 450
Query: 265 NMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDV 299
ME E KPD T+ +I+ YT +D VQ++
Sbjct: 451 QME--ERKCKPDKITFATMIKTYTAHGIFDAVQEL 483
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 111/270 (41%), Gaps = 37/270 (13%)
Query: 95 AGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFGSKGSATR 154
+ P F+ L+ +Y + A + L + P +T+ L++ + G R
Sbjct: 149 SSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIER 208
Query: 155 GLEILAAMEKLNYDIRQAWLIL----IEELVRNK-YLEDANKVFMKGSKGGLRATNEIYD 209
+L M+ + + + + IE L++ K E+A VF + + + T E Y+
Sbjct: 209 AEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYN 268
Query: 210 LLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYG 269
L+I K + + EM + + L++ A G+ E A FE ++
Sbjct: 269 LMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQ-- 326
Query: 270 EDFMKPDTETYNWVIQAYTRA----------------------ESYDRVQDVAELLGM-- 305
ED ++PD YN ++++Y+RA SY+ + D G+
Sbjct: 327 EDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHS 386
Query: 306 ----MVEDYKR--IQPNVKTHALLVECFTK 329
+ E+ KR I P +K+H LL+ ++K
Sbjct: 387 DAEAVFEEMKRLGIAPTMKSHMLLLSAYSK 416
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 111/270 (41%), Gaps = 37/270 (13%)
Query: 95 AGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFGSKGSATR 154
+ P F+ L+ +Y + A + L + P +T+ L++ + G R
Sbjct: 171 SSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIER 230
Query: 155 GLEILAAMEKLNYDIRQAWLIL----IEELVRNK-YLEDANKVFMKGSKGGLRATNEIYD 209
+L M+ + + + + IE L++ K E+A VF + + + T E Y+
Sbjct: 231 AEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYN 290
Query: 210 LLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYG 269
L+I K + + EM + + L++ A G+ E A FE ++
Sbjct: 291 LMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQ-- 348
Query: 270 EDFMKPDTETYNWVIQAYTRA----------------------ESYDRVQDVAELLGM-- 305
ED ++PD YN ++++Y+RA SY+ + D G+
Sbjct: 349 EDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHS 408
Query: 306 ----MVEDYKR--IQPNVKTHALLVECFTK 329
+ E+ KR I P +K+H LL+ ++K
Sbjct: 409 DAEAVFEEMKRLGIAPTMKSHMLLLSAYSK 438
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 112/245 (45%), Gaps = 18/245 (7%)
Query: 86 SELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVR- 144
+ ++ DM+ +NP +F L+ + G+ A + + + + + P + T+ +++
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290
Query: 145 --LFGSKGSATRGLEILAAMEKLNYDIRQAWLILIEELVRNKYLEDANKVFMKGSKGGLR 202
+ G A + +++A+ K + + LI + + +++ K+F + S G
Sbjct: 291 LCMHGRLYDAKKTFDLMAS--KGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
Query: 203 ATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATC--GIPEVAF 260
A Y+ LI C+VG ALDI M + R+ +C+L + C G E A
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWM-VSRRVTPDIITHCIL-LHGLCVNGEIESAL 406
Query: 261 ATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMM-VEDYKRIQPNVKT 319
F++M E ++ YN +I +A D+V+ EL + VE ++P+ +T
Sbjct: 407 VKFDDMRESEKYI--GIVAYNIMIHGLCKA---DKVEKAWELFCRLPVEG---VKPDART 458
Query: 320 HALLV 324
+ +++
Sbjct: 459 YTIMI 463
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 85/198 (42%), Gaps = 10/198 (5%)
Query: 102 RSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFGSKGSATRGLEILAA 161
R++ ++ +Y+ G + A+D R G P T+ ++ +FG G + R +IL
Sbjct: 211 RAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWR--KILGV 268
Query: 162 MEK-----LNYDIRQAWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEEDC 216
+++ L +D +L R L +A + F + G Y+ L++
Sbjct: 269 LDEMRSKGLKFDEFTCSTVL-SACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFG 327
Query: 217 KVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYGEDFMKPD 276
K G ++ AL + EME A + +N L++ G + A E M + + P+
Sbjct: 328 KAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMT--KKGVMPN 385
Query: 277 TETYNWVIQAYTRAESYD 294
TY VI AY +A D
Sbjct: 386 AITYTTVIDAYGKAGKED 403
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 184 KYLEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHF 243
K LE AN+ MKGS G + + +LI+ CK G A+ EM+ G A +
Sbjct: 195 KALELANE--MKGS--GCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVY 250
Query: 244 NCLLSVQATCGIPEVAFATF-ENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAEL 302
L+ CG + A F E +E G+ P TYN +I+ + + ++++ +E+
Sbjct: 251 TSLIRGFCDCGELDRGKALFDEVLERGD---SPCAITYNTLIRGFCK---LGQLKEASEI 304
Query: 303 LGMMVEDYKRIQPNVKTHALLVECFTKYCVVREAIRHFRALINFEGGIKALHNGGNYGDP 362
M+E + ++PNV T+ L++ +EA++ +I + A+
Sbjct: 305 FEFMIE--RGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAV--------T 354
Query: 363 LSLYLRALCREGRIVELLEALEAMAK 388
++ + LC++G + + +E +E M K
Sbjct: 355 YNIIINKLCKDGLVADAVEIVELMKK 380
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 127/309 (41%), Gaps = 32/309 (10%)
Query: 74 MNRARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYAL---NGDEQAAMDSLRRELGA 130
MN+AR +++ DM G +P S++ L+ Y NG A L+ +
Sbjct: 239 MNKAR--------DVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVEN 290
Query: 131 GLRPVHETFVALVRLFGSKGSATRGLEILAAMEKLNYDIRQ---AWLILIEELVRNKYLE 187
+ P TF L+ F + +++ M L+ D++ ++ LI L +
Sbjct: 291 DVSPNLTTFNILIDGFWKDDNLPGSMKVFKEM--LDQDVKPNVISYNSLINGLCNGGKIS 348
Query: 188 DANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLL 247
+A + K G++ Y+ LI CK ALD+ ++ G + TT +N L+
Sbjct: 349 EAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLI 408
Query: 248 SVQATCGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMV 307
G + FA E ME + + PD TYN +I R + + + + + L
Sbjct: 409 DAYCKLGKIDDGFALKEEME--REGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT--- 463
Query: 308 EDYKRIQPNVKTHALLVECFTKYCVVREAIRHFRALINFEGGIKALHNGGNYGDPLSLYL 367
+ P++ T +L+E + + R+A + + G+K H N + +
Sbjct: 464 ---SKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKM--GLKPRHLTYN------IVM 512
Query: 368 RALCREGRI 376
+ C+EG +
Sbjct: 513 KGYCKEGNL 521
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/237 (19%), Positives = 97/237 (40%), Gaps = 9/237 (3%)
Query: 89 IYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFGS 148
+++ + P +++ L+ + + A + R + AG P T+ +V +
Sbjct: 225 VFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCK 284
Query: 149 KGSATRGLEILAAME-KLNYDIRQAWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEI 207
G L I+ +M+ + + +L+ LE+A F++ + G++A +
Sbjct: 285 AGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAV 344
Query: 208 YDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENME 267
++ LI CK N + EM++ G + N +L G + AF F M
Sbjct: 345 FNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM- 403
Query: 268 YGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLV 324
+PD +TY VI+ + + + V + + K + P++ T ++L+
Sbjct: 404 --IKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRK-----KGVFPSMHTFSVLI 453