Miyakogusa Predicted Gene
- Lj5g3v1262950.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1262950.2 tr|B2CP01|B2CP01_LOTJA Granule bound starch
synthase Ia OS=Lotus japonicus PE=2 SV=1,99.73,0,STARCH SYNTHASE,NULL;
GLYCOSYLTRANSFERASE,NULL; UDP-Glycosyltransferase/glycogen
phosphorylase,NULL;,CUFF.55103.2
(367 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G32900.1 | Symbols: | UDP-Glycosyltransferase superfamily pr... 619 e-177
AT3G01180.1 | Symbols: AtSS2, SS2 | starch synthase 2 | chr3:624... 278 4e-75
AT5G24300.2 | Symbols: SSI1 | Glycogen/starch synthases, ADP-glu... 276 1e-74
AT5G24300.1 | Symbols: SSI1, SSI, ATSS1 | Glycogen/starch syntha... 276 1e-74
AT4G18240.1 | Symbols: ATSS4, SSIV, SS4 | starch synthase 4 | ch... 164 1e-40
AT1G11720.1 | Symbols: ATSS3, SS3 | starch synthase 3 | chr1:395... 155 5e-38
AT1G11720.2 | Symbols: SS3 | starch synthase 3 | chr1:3951597-39... 155 5e-38
>AT1G32900.1 | Symbols: | UDP-Glycosyltransferase superfamily
protein | chr1:11920582-11923506 REVERSE LENGTH=610
Length = 610
Score = 619 bits (1596), Expect = e-177, Method: Compositional matrix adjust.
Identities = 286/366 (78%), Positives = 325/366 (88%)
Query: 1 MFLEKVWGKTGSKLYGPTAGVDYEDNQLRFSLLCQAALEAPRVLNLNSSKYFSGPYGEDV 60
+FL KV GKTGSK+YGP GVDY DNQLRFSLLCQAALEAP+VLNLNSSKYFSGPYGEDV
Sbjct: 170 IFLAKVVGKTGSKIYGPITGVDYNDNQLRFSLLCQAALEAPQVLNLNSSKYFSGPYGEDV 229
Query: 61 VFIANDWHTALLPCYLKSMYKSRGIYQNAKVAFCIHNIAYQGRNAFSDFSQLNLPNQFKS 120
VF+ANDWHTALLPCYLKSMY+SRG+Y NAKV FCIHNIAYQGR AF D+S LNLP FKS
Sbjct: 230 VFVANDWHTALLPCYLKSMYQSRGVYMNAKVVFCIHNIAYQGRFAFDDYSLLNLPISFKS 289
Query: 121 SFDFTDGYDKPVKGRKINWMKAAILESNRVFTVSPYYAQELVSGEDRGVELDNIIRKTGI 180
SFDF DGY+KPVKGRKINWMKAAILE++RV TVSPYYAQEL+SG DRGVEL +R +
Sbjct: 290 SFDFMDGYEKPVKGRKINWMKAAILEAHRVLTVSPYYAQELISGVDRGVELHKYLRMKTV 349
Query: 181 TGIVNGMDIREWSPETDKFIDVHYDATTVTEAKSLLKEALQAEVGLPVDRNIPLIGFIGR 240
+GI+NGMD++EW+P TDK+ID+ YD TTVT+AK L+KEALQA VGLPVDR++P+IGFIGR
Sbjct: 350 SGIINGMDVQEWNPSTDKYIDIKYDITTVTDAKPLIKEALQAAVGLPVDRDVPVIGFIGR 409
Query: 241 LEEQKGSDILVEAIPEFIDQNVQIIVLGTGKKIMEKQIEQLEETYPDKAIGVAKFNAPLA 300
LEEQKGSDILVEAI +F+ NVQ+++LGTGKK ME QI +LEE +P KA+GVAKFN PLA
Sbjct: 410 LEEQKGSDILVEAISKFMGLNVQMVILGTGKKKMEAQILELEEKFPGKAVGVAKFNVPLA 469
Query: 301 HKIIAGADFIVIPSRFEPCGLVQLHAMPYGTVPIVSSTGGLVDTVKEGYTGFHTGAFNVE 360
H I AGADFI++PSRFEPCGL+QLHAM YGTVPIV+STGGLVDTVK+GYTGFH G FNV+
Sbjct: 470 HMITAGADFIIVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKDGYTGFHIGRFNVK 529
Query: 361 CETVDP 366
CE VDP
Sbjct: 530 CEVVDP 535
>AT3G01180.1 | Symbols: AtSS2, SS2 | starch synthase 2 |
chr3:62456-65678 REVERSE LENGTH=792
Length = 792
Score = 278 bits (711), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 146/325 (44%), Positives = 202/325 (62%), Gaps = 15/325 (4%)
Query: 29 RFSLLCQAALEAPRVLNLNSSKYFSGPYGEDVVFIANDWHTALLPCYLKSMYKSRGIYQN 88
R L C+AA+E P + Y G ++ FIANDWHTALLP YLK+ Y+ GI +
Sbjct: 406 RMVLFCKAAVEVPWYVPCGGVCYGDG----NLAFIANDWHTALLPVYLKAYYRDHGIMKY 461
Query: 89 AKVAFCIHNIAYQGRNAFSDFSQLNLPNQFKSSFDFTDGYDKPVKGRKINWMKAAILESN 148
+ IHNIA+QGR DFS ++LP+ + SF D PV G N A + ++
Sbjct: 462 TRSVLVIHNIAHQGRGPVDDFSYVDLPSHYLDSFKLYD----PVGGEHFNIFAAGLKAAD 517
Query: 149 RVFTVSPYYAQELVSGEDRGVELDNIIRKTG--ITGIVNGMDIREWSPETDKFID----V 202
RV TVS Y+ E+ + E G L NII + GIVNG+D +EW+PE D ++
Sbjct: 518 RVLTVSHGYSWEVKTLEG-GWGLHNIINENDWKFRGIVNGIDTQEWNPEFDTYLHSDDYT 576
Query: 203 HYDATTVTEAKSLLKEALQAEVGLPVDRNIPLIGFIGRLEEQKGSDILVEAIPEFIDQNV 262
+Y + K K ALQ E+GLPV ++PLIGFIGRL+ QKG D++ EA+P + Q+V
Sbjct: 577 NYSLENLHIGKPQCKAALQKELGLPVRPDVPLIGFIGRLDHQKGVDLIAEAVPWMMSQDV 636
Query: 263 QIIVLGTGKKIMEKQIEQLEETYPDKAIGVAKFNAPLAHKIIAGADFIVIPSRFEPCGLV 322
Q+++LGTG+ +E+ + Q+E Y DKA G F+ AH+I AGAD +++PSRFEPCGL
Sbjct: 637 QLVMLGTGRPDLEEVLRQMEHQYRDKARGWVGFSVKTAHRITAGADILLMPSRFEPCGLN 696
Query: 323 QLHAMPYGTVPIVSSTGGLVDTVKE 347
QL+AM YGT+P+V + GGL DTV++
Sbjct: 697 QLYAMNYGTIPVVHAVGGLRDTVQQ 721
>AT5G24300.2 | Symbols: SSI1 | Glycogen/starch synthases,
ADP-glucose type | chr5:8266934-8270860 FORWARD
LENGTH=652
Length = 652
Score = 276 bits (707), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 147/341 (43%), Positives = 211/341 (61%), Gaps = 20/341 (5%)
Query: 15 YGPTAGVDYEDNQLRFSLLCQAALEAPRVLNLNSSKYFSGPYGEDVVFIANDWHTALLPC 74
YG + G + DNQ RF+LLC AA EAP VL L Y GE +F+ NDWH L+P
Sbjct: 243 YGDSKGA-FGDNQFRFTLLCHAACEAPLVLPLGGFTY-----GEKSLFLVNDWHAGLVPI 296
Query: 75 YLKSMYKSRGIYQNAKVAFCIHNIAYQGRNAFSDFSQLNLPNQFKSSFDF-------TDG 127
L + Y+ G+Y++A+ IHN+A+QG + ++ L LP+++ + + T
Sbjct: 297 LLAAKYRPYGVYKDARSILIIHNLAHQGVEPAATYTNLGLPSEWYGAVGWVFPTWARTHA 356
Query: 128 YDKPVKGRKINWMKAAILESNRVFTVSPYYAQELVSGEDRGVELDNII--RKTGITGIVN 185
D G +N +K AI+ S+R+ TVS YA E+ + E G L +++ RK+ I GI N
Sbjct: 357 LDT---GEAVNVLKGAIVTSDRIITVSQGYAWEITTVEG-GYGLQDLLSSRKSVINGITN 412
Query: 186 GMDIREWSPETDKFIDVHYDATTVTEAKSLLKEALQAEVGLPVDRNIPLIGFIGRLEEQK 245
G+++ EW+P TD+ I HY A V+E K K ALQ E+GLP+ P+IGFIGRL+ QK
Sbjct: 413 GINVDEWNPSTDEHIPFHYSADDVSE-KIKCKMALQKELGLPIRPECPMIGFIGRLDYQK 471
Query: 246 GSDILVEAIPEFIDQNVQIIVLGTGKKIMEKQIEQLEETYPDKAIGVAKFNAPLAHKIIA 305
G D++ A P+ + ++Q ++LG+G E + +EETY DK G FN P++H+I A
Sbjct: 472 GIDLIQTAGPDLMVDDIQFVMLGSGDPKYESWMRSMEETYRDKFRGWVGFNVPISHRITA 531
Query: 306 GADFIVIPSRFEPCGLVQLHAMPYGTVPIVSSTGGLVDTVK 346
G D +++PSRFEPCGL QL+AM YGT+P+V TGGL DTV+
Sbjct: 532 GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHGTGGLRDTVE 572
>AT5G24300.1 | Symbols: SSI1, SSI, ATSS1 | Glycogen/starch
synthases, ADP-glucose type | chr5:8266934-8270860
FORWARD LENGTH=652
Length = 652
Score = 276 bits (707), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 147/341 (43%), Positives = 211/341 (61%), Gaps = 20/341 (5%)
Query: 15 YGPTAGVDYEDNQLRFSLLCQAALEAPRVLNLNSSKYFSGPYGEDVVFIANDWHTALLPC 74
YG + G + DNQ RF+LLC AA EAP VL L Y GE +F+ NDWH L+P
Sbjct: 243 YGDSKGA-FGDNQFRFTLLCHAACEAPLVLPLGGFTY-----GEKSLFLVNDWHAGLVPI 296
Query: 75 YLKSMYKSRGIYQNAKVAFCIHNIAYQGRNAFSDFSQLNLPNQFKSSFDF-------TDG 127
L + Y+ G+Y++A+ IHN+A+QG + ++ L LP+++ + + T
Sbjct: 297 LLAAKYRPYGVYKDARSILIIHNLAHQGVEPAATYTNLGLPSEWYGAVGWVFPTWARTHA 356
Query: 128 YDKPVKGRKINWMKAAILESNRVFTVSPYYAQELVSGEDRGVELDNII--RKTGITGIVN 185
D G +N +K AI+ S+R+ TVS YA E+ + E G L +++ RK+ I GI N
Sbjct: 357 LDT---GEAVNVLKGAIVTSDRIITVSQGYAWEITTVEG-GYGLQDLLSSRKSVINGITN 412
Query: 186 GMDIREWSPETDKFIDVHYDATTVTEAKSLLKEALQAEVGLPVDRNIPLIGFIGRLEEQK 245
G+++ EW+P TD+ I HY A V+E K K ALQ E+GLP+ P+IGFIGRL+ QK
Sbjct: 413 GINVDEWNPSTDEHIPFHYSADDVSE-KIKCKMALQKELGLPIRPECPMIGFIGRLDYQK 471
Query: 246 GSDILVEAIPEFIDQNVQIIVLGTGKKIMEKQIEQLEETYPDKAIGVAKFNAPLAHKIIA 305
G D++ A P+ + ++Q ++LG+G E + +EETY DK G FN P++H+I A
Sbjct: 472 GIDLIQTAGPDLMVDDIQFVMLGSGDPKYESWMRSMEETYRDKFRGWVGFNVPISHRITA 531
Query: 306 GADFIVIPSRFEPCGLVQLHAMPYGTVPIVSSTGGLVDTVK 346
G D +++PSRFEPCGL QL+AM YGT+P+V TGGL DTV+
Sbjct: 532 GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHGTGGLRDTVE 572
>AT4G18240.1 | Symbols: ATSS4, SSIV, SS4 | starch synthase 4 |
chr4:10082221-10087044 FORWARD LENGTH=1040
Length = 1040
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/334 (33%), Positives = 175/334 (52%), Gaps = 35/334 (10%)
Query: 24 EDNQLRFSLLCQAALEAPRVLNLNSSKYFSGPYGEDVVFIANDWHTALLPCYLKSMYKSR 83
+D+ RFS +AALE L L S K D++ +DW TA + +Y +
Sbjct: 647 QDDFRRFSYFSRAALE----LLLQSGK------KPDIIH-CHDWQTAFVAPLYWDLYAPK 695
Query: 84 GIYQNAKVAFCIHNIAYQGRNAFS-------DFSQLNLPNQFKSSFDFTDGYDKPVKGRK 136
G+ +A++ F HN YQG + S D +QLN P++ + G +
Sbjct: 696 GL-DSARICFTCHNFEYQGTASASELGSCGLDVNQLNRPDRMQDH----------SSGDR 744
Query: 137 INWMKAAILESNRVFTVSPYYAQELVSGED-RGVELDNIIRKTGITGIVNGMDIREWSPE 195
+N +K AI+ SN V TVSP YAQE+ + E +G+ GI+NG+D W+P
Sbjct: 745 VNPVKGAIIFSNIVTTVSPTYAQEVRTAEGGKGLHSTLNFHSKKFIGILNGIDTDSWNPA 804
Query: 196 TDKFIDVHYDATTVTEAKSLLKEALQAEVGLP-VDRNIPLIGFIGRLEEQKGSDILVEAI 254
TD F+ ++A + + K K AL+ ++GL + PL+G I RL QKG ++ AI
Sbjct: 805 TDPFLKAQFNAKDL-QGKEENKHALRKQLGLSSAESRRPLVGCITRLVPQKGVHLIRHAI 863
Query: 255 PEFIDQNVQIIVLGTGK-KIMEKQIEQLEETYP--DKAIGVAKFNAPLAHKIIAGADFIV 311
++ Q ++LG+ ++++ E +E+ + D + K++ L+H I A +D +
Sbjct: 864 YRTLELGGQFVLLGSSPVPHIQREFEGIEQQFKSHDHVRLLLKYDEALSHTIYAASDLFI 923
Query: 312 IPSRFEPCGLVQLHAMPYGTVPIVSSTGGLVDTV 345
IPS FEPCGL Q+ AM YG++PI TGGL D+V
Sbjct: 924 IPSIFEPCGLTQMIAMRYGSIPIARKTGGLNDSV 957
>AT1G11720.1 | Symbols: ATSS3, SS3 | starch synthase 3 |
chr1:3952460-3956840 FORWARD LENGTH=1042
Length = 1042
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 153/326 (46%), Gaps = 59/326 (18%)
Query: 25 DNQLRFSLLCQAALEAPRVLNLNSSKYFSGPYGEDVVFIANDWHTALLPCYLKSMYKSRG 84
D+ RF C AALE G + D++ +DW +A + K Y G
Sbjct: 693 DDAGRFGFFCHAALEF----------LLQGGFHPDILH-CHDWSSAPVSWLFKDHYTQYG 741
Query: 85 IYQNAKVAFCIHNIAYQGRNAFSDFSQLNLPNQFKSSFDFTDGYDKPVKGRKINWMKAAI 144
+ + ++ F IHN+ + G NA A+
Sbjct: 742 LIK-TRIVFTIHNLEF-GANAIG----------------------------------KAM 765
Query: 145 LESNRVFTVSPYYAQELVSGEDRGVELDNIIRKTGITGIVNGMDIREWSPETDKFIDVHY 204
+++ TVSP YA+E+ L GI+NG+D W P D FI V Y
Sbjct: 766 TFADKATTVSPTYAKEVAGNSVISAHL------YKFHGIINGIDPDIWDPYNDNFIPVPY 819
Query: 205 DATTVTEAKSLLKEALQAEVGLPVDRNIPLIGFIGRLEEQKGSDILVEAIPEFIDQNVQI 264
+ V E K KE LQ +GL + P++G I RL QKG ++ AI +++N Q+
Sbjct: 820 TSENVVEGKRAAKEELQNRLGLK-SADFPVVGIITRLTHQKGIHLIKHAIWRTLERNGQV 878
Query: 265 IVLGTGK--KIMEKQIE---QLEETYPDKAIGVAKFNAPLAHKIIAGADFIVIPSRFEPC 319
++LG+ +I + QL ++ D+A V ++ PL+H I AGADFI++PS FEPC
Sbjct: 879 VLLGSAPDPRIQNDFVNLANQLHSSHGDRARLVLTYDEPLSHLIYAGADFILVPSIFEPC 938
Query: 320 GLVQLHAMPYGTVPIVSSTGGLVDTV 345
GL QL AM YG VP+V TGGL DTV
Sbjct: 939 GLTQLIAMRYGAVPVVRKTGGLFDTV 964
>AT1G11720.2 | Symbols: SS3 | starch synthase 3 | chr1:3951597-3956840
FORWARD LENGTH=1094
Length = 1094
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 153/326 (46%), Gaps = 59/326 (18%)
Query: 25 DNQLRFSLLCQAALEAPRVLNLNSSKYFSGPYGEDVVFIANDWHTALLPCYLKSMYKSRG 84
D+ RF C AALE G + D++ +DW +A + K Y G
Sbjct: 745 DDAGRFGFFCHAALEF----------LLQGGFHPDILH-CHDWSSAPVSWLFKDHYTQYG 793
Query: 85 IYQNAKVAFCIHNIAYQGRNAFSDFSQLNLPNQFKSSFDFTDGYDKPVKGRKINWMKAAI 144
+ + ++ F IHN+ + G NA A+
Sbjct: 794 LIK-TRIVFTIHNLEF-GANAIG----------------------------------KAM 817
Query: 145 LESNRVFTVSPYYAQELVSGEDRGVELDNIIRKTGITGIVNGMDIREWSPETDKFIDVHY 204
+++ TVSP YA+E+ L GI+NG+D W P D FI V Y
Sbjct: 818 TFADKATTVSPTYAKEVAGNSVISAHL------YKFHGIINGIDPDIWDPYNDNFIPVPY 871
Query: 205 DATTVTEAKSLLKEALQAEVGLPVDRNIPLIGFIGRLEEQKGSDILVEAIPEFIDQNVQI 264
+ V E K KE LQ +GL + P++G I RL QKG ++ AI +++N Q+
Sbjct: 872 TSENVVEGKRAAKEELQNRLGLK-SADFPVVGIITRLTHQKGIHLIKHAIWRTLERNGQV 930
Query: 265 IVLGTGK--KIMEKQIE---QLEETYPDKAIGVAKFNAPLAHKIIAGADFIVIPSRFEPC 319
++LG+ +I + QL ++ D+A V ++ PL+H I AGADFI++PS FEPC
Sbjct: 931 VLLGSAPDPRIQNDFVNLANQLHSSHGDRARLVLTYDEPLSHLIYAGADFILVPSIFEPC 990
Query: 320 GLVQLHAMPYGTVPIVSSTGGLVDTV 345
GL QL AM YG VP+V TGGL DTV
Sbjct: 991 GLTQLIAMRYGAVPVVRKTGGLFDTV 1016