Miyakogusa Predicted Gene

Lj5g3v1261920.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1261920.1 Non Chatacterized Hit- tr|K4B068|K4B068_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,72.58,0.000000000000003,PPAN (PETER PAN-LIKE PROTEIN),NULL;
PETER PAN-RELATED,NULL,gene.g61524.t1.1
         (114 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G61770.1 | Symbols: PPAN | PETER PAN-like protein | chr5:2481...    75   6e-15
AT5G61770.3 | Symbols: PPAN | PETER PAN-like protein | chr5:2481...    75   6e-15
AT5G61770.2 | Symbols: PPAN | PETER PAN-like protein | chr5:2481...    75   6e-15

>AT5G61770.1 | Symbols: PPAN | PETER PAN-like protein |
          chr5:24815888-24817495 FORWARD LENGTH=345
          Length = 345

 Score = 75.5 bits (184), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 40/61 (65%), Positives = 45/61 (73%), Gaps = 6/61 (9%)

Query: 18 RPVVIKNRKQLQQQPTVDPITGKKIPKSFVFSRGKLPAPLKQLQMDLRKLMLPYTALNLK 77
          +P+  KN      Q  V  +TG KIPKSFVFSR KL  P+KQLQMDLRKLMLPYTAL+LK
Sbjct: 15 KPIAKKN------QEDVSHVTGDKIPKSFVFSRMKLAGPVKQLQMDLRKLMLPYTALSLK 68

Query: 78 E 78
          E
Sbjct: 69 E 69


>AT5G61770.3 | Symbols: PPAN | PETER PAN-like protein |
          chr5:24815888-24817495 FORWARD LENGTH=346
          Length = 346

 Score = 75.5 bits (184), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 40/61 (65%), Positives = 45/61 (73%), Gaps = 6/61 (9%)

Query: 18 RPVVIKNRKQLQQQPTVDPITGKKIPKSFVFSRGKLPAPLKQLQMDLRKLMLPYTALNLK 77
          +P+  KN      Q  V  +TG KIPKSFVFSR KL  P+KQLQMDLRKLMLPYTAL+LK
Sbjct: 15 KPIAKKN------QEDVSHVTGDKIPKSFVFSRMKLAGPVKQLQMDLRKLMLPYTALSLK 68

Query: 78 E 78
          E
Sbjct: 69 E 69


>AT5G61770.2 | Symbols: PPAN | PETER PAN-like protein |
          chr5:24815888-24817495 FORWARD LENGTH=346
          Length = 346

 Score = 75.5 bits (184), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 40/61 (65%), Positives = 45/61 (73%), Gaps = 6/61 (9%)

Query: 18 RPVVIKNRKQLQQQPTVDPITGKKIPKSFVFSRGKLPAPLKQLQMDLRKLMLPYTALNLK 77
          +P+  KN      Q  V  +TG KIPKSFVFSR KL  P+KQLQMDLRKLMLPYTAL+LK
Sbjct: 15 KPIAKKN------QEDVSHVTGDKIPKSFVFSRMKLAGPVKQLQMDLRKLMLPYTALSLK 68

Query: 78 E 78
          E
Sbjct: 69 E 69