Miyakogusa Predicted Gene
- Lj5g3v1261900.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1261900.1 tr|I1LBX6|I1LBX6_SOYBN Ubiquitin
carboxyl-terminal hydrolase OS=Glycine max PE=3 SV=1,92.36,0,SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; UCH_2_3,Peptidase C19,
ubiquitin carboxyl-terminal ,CUFF.55098.1
(144 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G10570.1 | Symbols: UBP9 | ubiquitin-specific protease 9 | ch... 253 3e-68
AT4G10590.1 | Symbols: UBP10 | ubiquitin-specific protease 10 | ... 250 2e-67
AT4G10590.2 | Symbols: UBP10 | ubiquitin-specific protease 10 | ... 250 2e-67
AT1G32850.1 | Symbols: UBP11 | ubiquitin-specific protease 11 | ... 242 6e-65
AT2G40930.1 | Symbols: UBP5, ATUBP5, PDE323 | ubiquitin-specific... 218 7e-58
AT5G22030.1 | Symbols: UBP8 | ubiquitin-specific protease 8 | ch... 213 3e-56
AT5G22030.2 | Symbols: UBP8 | ubiquitin-specific protease 8 | ch... 213 3e-56
AT4G31670.1 | Symbols: UBP18 | ubiquitin-specific protease 18 | ... 87 3e-18
AT4G24560.1 | Symbols: UBP16 | ubiquitin-specific protease 16 | ... 87 4e-18
AT5G46740.1 | Symbols: UBP21 | ubiquitin-specific protease 21 | ... 86 1e-17
AT4G17895.1 | Symbols: UBP20 | ubiquitin-specific protease 20 | ... 85 2e-17
AT5G10790.1 | Symbols: UBP22 | ubiquitin-specific protease 22 | ... 83 7e-17
AT1G17110.2 | Symbols: UBP15 | ubiquitin-specific protease 15 | ... 81 2e-16
AT1G17110.1 | Symbols: UBP15 | ubiquitin-specific protease 15 | ... 81 2e-16
AT2G24640.2 | Symbols: UBP19 | ubiquitin-specific protease 19 | ... 81 2e-16
AT2G24640.1 | Symbols: UBP19 | ubiquitin-specific protease 19 | ... 80 4e-16
AT5G57990.1 | Symbols: UBP23 | ubiquitin-specific protease 23 | ... 80 5e-16
AT5G65450.1 | Symbols: UBP17 | ubiquitin-specific protease 17 | ... 75 2e-14
AT2G32780.1 | Symbols: UBP1, ATUBP1 | ubiquitin-specific proteas... 74 4e-14
AT4G30890.3 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 73 6e-14
AT4G30890.2 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 73 6e-14
AT4G30890.1 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 73 6e-14
AT4G39910.1 | Symbols: ATUBP3, UBP3 | ubiquitin-specific proteas... 70 5e-13
AT2G22310.2 | Symbols: UBP4 | ubiquitin-specific protease 4 | ch... 69 1e-12
AT2G22310.1 | Symbols: ATUBP4, UBP4 | ubiquitin-specific proteas... 69 1e-12
AT1G04860.1 | Symbols: UBP2, ATUBP2 | ubiquitin-specific proteas... 69 1e-12
AT3G49600.1 | Symbols: UBP26, SUP32, ATUBP26 | ubiquitin-specifi... 65 2e-11
AT3G14400.1 | Symbols: UBP25 | ubiquitin-specific protease 25 | ... 64 3e-11
AT4G22285.1 | Symbols: | Ubiquitin C-terminal hydrolases superf... 63 5e-11
AT4G22350.2 | Symbols: | Ubiquitin C-terminal hydrolases superf... 63 6e-11
AT4G22350.1 | Symbols: | Ubiquitin C-terminal hydrolases superf... 63 6e-11
AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 55 2e-08
AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 55 2e-08
AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 55 2e-08
AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 | ... 54 3e-08
AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 | ... 54 3e-08
AT4G39370.1 | Symbols: UBP27 | ubiquitin-specific protease 27 | ... 52 2e-07
>AT4G10570.1 | Symbols: UBP9 | ubiquitin-specific protease 9 |
chr4:6523657-6528058 REVERSE LENGTH=923
Length = 923
Score = 253 bits (646), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 120/144 (83%), Positives = 137/144 (95%)
Query: 1 MEAFLTEEPLGPDDMWYCPRCKEHRQATKKLDLWKLPEILVFHLKRFSYSRYLKNKLDTF 60
+EAFL EEPLGPDDMW+CP CKEHRQA KKLDLWKLP+ILVFHLKRF+YSRYLKNK+DTF
Sbjct: 754 LEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYLKNKIDTF 813
Query: 61 VNFPIHDLDLTKYVKSKDGQSYKYNLYAISNHYGGLGGGHYTAYAKLIDENKWYHFDDSH 120
VNFP+HDLDL+KYVK+K+GQSY Y LYA+SNHYGGLGGGHYTAYAKLID+NKWYHFDDSH
Sbjct: 814 VNFPVHDLDLSKYVKNKNGQSYLYELYAVSNHYGGLGGGHYTAYAKLIDDNKWYHFDDSH 873
Query: 121 VTPADEAEIKSSAAYVLFYQRVRS 144
V+ +E+EI++SAAYVLFY+RVRS
Sbjct: 874 VSSVNESEIRNSAAYVLFYRRVRS 897
>AT4G10590.1 | Symbols: UBP10 | ubiquitin-specific protease 10 |
chr4:6538919-6543272 REVERSE LENGTH=910
Length = 910
Score = 250 bits (638), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 119/144 (82%), Positives = 136/144 (94%)
Query: 1 MEAFLTEEPLGPDDMWYCPRCKEHRQATKKLDLWKLPEILVFHLKRFSYSRYLKNKLDTF 60
+EAFL EEPLGPDDMW+CP CKEHRQA KKLDLWKLP+ILVFHLKRF+YSRYLKNK+DTF
Sbjct: 753 LEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYLKNKIDTF 812
Query: 61 VNFPIHDLDLTKYVKSKDGQSYKYNLYAISNHYGGLGGGHYTAYAKLIDENKWYHFDDSH 120
VNFP+HDLDL+KYVK+K+ QSY Y LYA+SNHYGGLGGGHYTAYAKLID+N+WYHFDDSH
Sbjct: 813 VNFPVHDLDLSKYVKNKNDQSYLYELYAVSNHYGGLGGGHYTAYAKLIDDNEWYHFDDSH 872
Query: 121 VTPADEAEIKSSAAYVLFYQRVRS 144
V+ +E+EIK+SAAYVLFY+RVRS
Sbjct: 873 VSSVNESEIKNSAAYVLFYRRVRS 896
>AT4G10590.2 | Symbols: UBP10 | ubiquitin-specific protease 10 |
chr4:6538919-6543272 REVERSE LENGTH=910
Length = 910
Score = 250 bits (638), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 119/144 (82%), Positives = 136/144 (94%)
Query: 1 MEAFLTEEPLGPDDMWYCPRCKEHRQATKKLDLWKLPEILVFHLKRFSYSRYLKNKLDTF 60
+EAFL EEPLGPDDMW+CP CKEHRQA KKLDLWKLP+ILVFHLKRF+YSRYLKNK+DTF
Sbjct: 753 LEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYLKNKIDTF 812
Query: 61 VNFPIHDLDLTKYVKSKDGQSYKYNLYAISNHYGGLGGGHYTAYAKLIDENKWYHFDDSH 120
VNFP+HDLDL+KYVK+K+ QSY Y LYA+SNHYGGLGGGHYTAYAKLID+N+WYHFDDSH
Sbjct: 813 VNFPVHDLDLSKYVKNKNDQSYLYELYAVSNHYGGLGGGHYTAYAKLIDDNEWYHFDDSH 872
Query: 121 VTPADEAEIKSSAAYVLFYQRVRS 144
V+ +E+EIK+SAAYVLFY+RVRS
Sbjct: 873 VSSVNESEIKNSAAYVLFYRRVRS 896
>AT1G32850.1 | Symbols: UBP11 | ubiquitin-specific protease 11 |
chr1:11902629-11906900 FORWARD LENGTH=892
Length = 892
Score = 242 bits (618), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 118/144 (81%), Positives = 132/144 (91%)
Query: 1 MEAFLTEEPLGPDDMWYCPRCKEHRQATKKLDLWKLPEILVFHLKRFSYSRYLKNKLDTF 60
+EAFL EEPLGPDDMWYCP CKEHRQA KKLDLWKLP+ILVFHLKRF+YSRY KNK+DT
Sbjct: 739 LEAFLAEEPLGPDDMWYCPGCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYFKNKIDTL 798
Query: 61 VNFPIHDLDLTKYVKSKDGQSYKYNLYAISNHYGGLGGGHYTAYAKLIDENKWYHFDDSH 120
VNF IHDLDL+KYVK++DGQSY Y LYAISNHYGGLGGGHYTAYAKL+DE KWY+FDDS
Sbjct: 799 VNFHIHDLDLSKYVKNEDGQSYLYELYAISNHYGGLGGGHYTAYAKLMDETKWYNFDDSR 858
Query: 121 VTPADEAEIKSSAAYVLFYQRVRS 144
V+ +E+EIK+SAAYVLFYQRV+S
Sbjct: 859 VSAVNESEIKTSAAYVLFYQRVKS 882
>AT2G40930.1 | Symbols: UBP5, ATUBP5, PDE323 | ubiquitin-specific
protease 5 | chr2:17076714-17082192 REVERSE LENGTH=924
Length = 924
Score = 218 bits (556), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 96/142 (67%), Positives = 123/142 (86%), Gaps = 1/142 (0%)
Query: 1 MEAFLTEEPLGPDDMWYCPRCKEHRQATKKLDLWKLPEILVFHLKRFSYSRYLKNKLDTF 60
+EAFL EEPL PD+MW+CP+C E RQA+KKLDLW+LPE+LV HLKRFSYSR +K+KL+TF
Sbjct: 774 LEAFLREEPLVPDEMWFCPQCNERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETF 833
Query: 61 VNFPIHDLDLTKYVKSKD-GQSYKYNLYAISNHYGGLGGGHYTAYAKLIDENKWYHFDDS 119
VNFPIHDLDLTKYV +K+ Q Y LYA++NHYGG+G GHYTA+ KL+D+++WY+FDDS
Sbjct: 834 VNFPIHDLDLTKYVANKNLSQPQLYELYALTNHYGGMGSGHYTAHIKLLDDSRWYNFDDS 893
Query: 120 HVTPADEAEIKSSAAYVLFYQR 141
H++ +E ++KS AAYVLFY+R
Sbjct: 894 HISHINEDDVKSGAAYVLFYRR 915
>AT5G22030.1 | Symbols: UBP8 | ubiquitin-specific protease 8 |
chr5:7290155-7296344 REVERSE LENGTH=913
Length = 913
Score = 213 bits (542), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 98/143 (68%), Positives = 120/143 (83%), Gaps = 2/143 (1%)
Query: 1 MEAFLTEEPLGPDDMWYCPRCKEHRQATKKLDLWKLPEILVFHLKRFSYSRYLKNKLDTF 60
+EAFLTEEPLGPDDMWYCP CKEHRQA KKLDLW+LPEILV HLKRFSYSR++KNKL+ +
Sbjct: 770 LEAFLTEEPLGPDDMWYCPGCKEHRQAIKKLDLWRLPEILVIHLKRFSYSRFMKNKLEAY 829
Query: 61 VNFPIHDLDLTKYVKSKDGQ-SYKYNLYAISNHYGGLGGGHYTAYAKLIDENKWYHFDDS 119
V+FP+ +LDL+ Y+ K+GQ +Y+Y LYAISNHYG +GGGHYTAY ++WY FDDS
Sbjct: 830 VDFPLDNLDLSSYISYKNGQTTYRYMLYAISNHYGSMGGGHYTAYVHH-GGDRWYDFDDS 888
Query: 120 HVTPADEAEIKSSAAYVLFYQRV 142
HV + +IK+SAAYVLFY+R+
Sbjct: 889 HVHQISQEKIKTSAAYVLFYKRL 911
>AT5G22030.2 | Symbols: UBP8 | ubiquitin-specific protease 8 |
chr5:7290155-7296344 REVERSE LENGTH=913
Length = 913
Score = 213 bits (542), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 98/143 (68%), Positives = 120/143 (83%), Gaps = 2/143 (1%)
Query: 1 MEAFLTEEPLGPDDMWYCPRCKEHRQATKKLDLWKLPEILVFHLKRFSYSRYLKNKLDTF 60
+EAFLTEEPLGPDDMWYCP CKEHRQA KKLDLW+LPEILV HLKRFSYSR++KNKL+ +
Sbjct: 770 LEAFLTEEPLGPDDMWYCPGCKEHRQAIKKLDLWRLPEILVIHLKRFSYSRFMKNKLEAY 829
Query: 61 VNFPIHDLDLTKYVKSKDGQ-SYKYNLYAISNHYGGLGGGHYTAYAKLIDENKWYHFDDS 119
V+FP+ +LDL+ Y+ K+GQ +Y+Y LYAISNHYG +GGGHYTAY ++WY FDDS
Sbjct: 830 VDFPLDNLDLSSYISYKNGQTTYRYMLYAISNHYGSMGGGHYTAYVHH-GGDRWYDFDDS 888
Query: 120 HVTPADEAEIKSSAAYVLFYQRV 142
HV + +IK+SAAYVLFY+R+
Sbjct: 889 HVHQISQEKIKTSAAYVLFYKRL 911
>AT4G31670.1 | Symbols: UBP18 | ubiquitin-specific protease 18 |
chr4:15336007-15339506 REVERSE LENGTH=631
Length = 631
Score = 87.4 bits (215), Expect = 3e-18, Method: Composition-based stats.
Identities = 52/147 (35%), Positives = 76/147 (51%), Gaps = 7/147 (4%)
Query: 1 MEAFLTEEPLGPDDMWYCPRCKEHRQATKKLDLWKLPEILVFHLKRFSYSRYLKNKLDTF 60
++ F EE L D+M+ C RC ++ +A K+L + + P IL LKR+ RY KL+
Sbjct: 334 LDQFTAEEWLHGDNMYKCDRCSDYVKACKRLTIRRAPNILTIALKRYQGGRY--GKLNKR 391
Query: 61 VNFPIHDLDLTKYVKSKDGQSYKYNLYAISNHYGGLGG---GHYTAYAKLIDENKWYHFD 117
++FP LDL Y+ S Y LYA+ H L GHY Y K N WY D
Sbjct: 392 ISFP-ETLDLNPYMSEGGDGSDVYKLYAVIVHLDMLNASFFGHYICYIKDFCGN-WYRID 449
Query: 118 DSHVTPADEAEIKSSAAYVLFYQRVRS 144
DS + + ++ S AY+L Y R+++
Sbjct: 450 DSEIESVELEDVLSQRAYMLLYSRIQA 476
>AT4G24560.1 | Symbols: UBP16 | ubiquitin-specific protease 16 |
chr4:12679493-12684528 REVERSE LENGTH=1008
Length = 1008
Score = 87.0 bits (214), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 73/145 (50%), Gaps = 8/145 (5%)
Query: 1 MEAFLTEEPLGPDDMWYCPRCKEHRQATKKLDLWKLPEILVFHLKRFSYSRYLKNKLDTF 60
+ F E L ++ + C CK + +A KKL + + P +L LKRF ++ KL+
Sbjct: 708 LRRFTRTEILDGENKYRCGSCKSYERAKKKLKITEPPNVLTIALKRFQAGKF--GKLNKL 765
Query: 61 VNFPIHDLDLTKYVKSKDGQSYKYNLYAISNHYGGLGG---GHYTAYAKLIDENKWYHFD 117
+ FP LDL YV +S+ Y LY + H + GHY Y + ++NKWY D
Sbjct: 766 IRFP-ETLDLAPYVSGGSEKSHDYKLYGVIVHLDVMNAAFSGHYVCYIR--NQNKWYKAD 822
Query: 118 DSHVTPADEAEIKSSAAYVLFYQRV 142
DS V +D I + AY+LFY R
Sbjct: 823 DSTVVTSDVERILTKGAYMLFYARC 847
>AT5G46740.1 | Symbols: UBP21 | ubiquitin-specific protease 21 |
chr5:18965410-18968492 REVERSE LENGTH=732
Length = 732
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 78/144 (54%), Gaps = 7/144 (4%)
Query: 1 MEAFLTEEPLGPDDMWYCPRCKEHRQATKKLDLWKLPEILVFHLKRFSYSRYLKNKLDTF 60
+E+F E L +D C CKE K+L KLP + FHLKRF+ K+
Sbjct: 329 LESFTCVEKL--EDQLTCDNCKEKVTKEKQLRFDKLPPVATFHLKRFTNDGVTMEKIFDH 386
Query: 61 VNFPIHDLDLTKYVKSK-DGQ-SYKYNLYAISNHYGGLGG-GHYTAYAKLIDENKWYHFD 117
+ FP+ +LDL+ ++ S D + S +Y+LYA H G GHY++Y + E W++FD
Sbjct: 387 IEFPL-ELDLSPFMSSNHDPEVSTRYHLYAFVEHIGIRATFGHYSSYVRSAPET-WHNFD 444
Query: 118 DSHVTPADEAEIKSSAAYVLFYQR 141
DS VT E + S AY+LFY R
Sbjct: 445 DSKVTRISEERVLSRPAYILFYAR 468
>AT4G17895.1 | Symbols: UBP20 | ubiquitin-specific protease 20 |
chr4:9939914-9942698 FORWARD LENGTH=695
Length = 695
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 81/144 (56%), Gaps = 7/144 (4%)
Query: 1 MEAFLTEEPLGPDDMWYCPRCKEHRQATKKLDLWKLPEILVFHLKRFSYSRYLKNKLDTF 60
+E+F E L D+ C C E K+L L KLP + FHLKRF + K+
Sbjct: 336 LESFTRVEKL--DEQLTCDNCNEKVSKEKQLLLDKLPLVATFHLKRFKNNGLYMEKIYKH 393
Query: 61 VNFPIHDLDLTKYVKS--KDGQSYKYNLYAISNHYG-GLGGGHYTAYAKLIDENKWYHFD 117
V P+ ++DL Y+++ ++ S KY+LYA+ H+G + GHY++Y + + W+HFD
Sbjct: 394 VKIPL-EIDLQPYMRNIQENEVSTKYHLYALVEHFGYSVAYGHYSSYVRSAPK-IWHHFD 451
Query: 118 DSHVTPADEAEIKSSAAYVLFYQR 141
DS VT DE + S +Y+LFY R
Sbjct: 452 DSKVTRIDEDMVLSQDSYILFYAR 475
>AT5G10790.1 | Symbols: UBP22 | ubiquitin-specific protease 22 |
chr5:3410638-3412559 FORWARD LENGTH=557
Length = 557
Score = 82.8 bits (203), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 82/167 (49%), Gaps = 29/167 (17%)
Query: 1 MEAFLTEEPLGPDDMWYCPRCKEHRQATKKLDLWKLPEILVFHLKRF--SYSRYLKNKLD 58
++ F E LGPD C C E R+++K++ + +LP +L H+KRF S +R K+D
Sbjct: 367 LDFFTRSEKLGPDQKLNCQSCGEKRESSKQMSIRRLPLLLCLHVKRFEHSLTRKTSRKID 426
Query: 59 TFVNFPIHDLDLTKYVKSK-------------DGQS-----------YKYNLYAISNHYG 94
+++ +P L+++ Y+ S DG+ ++ ++A+ H G
Sbjct: 427 SYLQYPFR-LNMSPYLSSSIIGKRFGNRIFAFDGEGEYDSSSSSSPSAEFEIFAVVTHKG 485
Query: 95 GLGGGHYTAYAKLIDENKWYHFDDSHVTPADEAEIKSSAAYVLFYQR 141
L GHY Y +L + WY DD+ + +E ++ Y+LFY +
Sbjct: 486 MLESGHYVTYLRL--KGLWYRCDDAWINEVEEEVVRGCECYMLFYAQ 530
>AT1G17110.2 | Symbols: UBP15 | ubiquitin-specific protease 15 |
chr1:5845816-5849889 REVERSE LENGTH=928
Length = 928
Score = 81.3 bits (199), Expect = 2e-16, Method: Composition-based stats.
Identities = 49/144 (34%), Positives = 72/144 (50%), Gaps = 7/144 (4%)
Query: 1 MEAFLTEEPLGPDDMWYCPRCKEHRQATKKLDLWKLPEILVFHLKRFSYSRYLKNKLDTF 60
+ F E L ++M+ C RC + +A K+L + + P IL LKRF RY K++
Sbjct: 608 LTQFTRPEDLDGENMYRCSRCAGYVRARKELSIHEAPNILTIVLKRFQEGRY--GKINKC 665
Query: 61 VNFPIHDLDLTKYVKSKDGQSYKYNLYAISNHYGGLGG---GHYTAYAKLIDENKWYHFD 117
++FP LD+ ++ Y LYA+ H L GHY +Y K + N WY D
Sbjct: 666 ISFP-EMLDMIPFMTRTGDVPPLYMLYAVIVHLDTLNASFSGHYISYVKDLRGN-WYRID 723
Query: 118 DSHVTPADEAEIKSSAAYVLFYQR 141
DS + P ++ S AY+LFY R
Sbjct: 724 DSEIHPVPMTQVMSEGAYMLFYMR 747
>AT1G17110.1 | Symbols: UBP15 | ubiquitin-specific protease 15 |
chr1:5845816-5849889 REVERSE LENGTH=924
Length = 924
Score = 81.3 bits (199), Expect = 2e-16, Method: Composition-based stats.
Identities = 49/144 (34%), Positives = 72/144 (50%), Gaps = 7/144 (4%)
Query: 1 MEAFLTEEPLGPDDMWYCPRCKEHRQATKKLDLWKLPEILVFHLKRFSYSRYLKNKLDTF 60
+ F E L ++M+ C RC + +A K+L + + P IL LKRF RY K++
Sbjct: 604 LTQFTRPEDLDGENMYRCSRCAGYVRARKELSIHEAPNILTIVLKRFQEGRY--GKINKC 661
Query: 61 VNFPIHDLDLTKYVKSKDGQSYKYNLYAISNHYGGLGG---GHYTAYAKLIDENKWYHFD 117
++FP LD+ ++ Y LYA+ H L GHY +Y K + N WY D
Sbjct: 662 ISFP-EMLDMIPFMTRTGDVPPLYMLYAVIVHLDTLNASFSGHYISYVKDLRGN-WYRID 719
Query: 118 DSHVTPADEAEIKSSAAYVLFYQR 141
DS + P ++ S AY+LFY R
Sbjct: 720 DSEIHPVPMTQVMSEGAYMLFYMR 743
>AT2G24640.2 | Symbols: UBP19 | ubiquitin-specific protease 19 |
chr2:10475613-10478388 REVERSE LENGTH=502
Length = 502
Score = 81.3 bits (199), Expect = 2e-16, Method: Composition-based stats.
Identities = 51/146 (34%), Positives = 73/146 (50%), Gaps = 7/146 (4%)
Query: 1 MEAFLTEEPLGPDDMWYCPRCKEHRQATKKLDLWKLPEILVFHLKRFSYSRYLKNKLDTF 60
++ F +E L D+++ C RC ++ +A K+L + P IL LKRF R+ KL+
Sbjct: 170 LDQFTAKEWLQGDNLYKCDRCDDYVKACKRLSIRCAPNILTIALKRFQGGRF--GKLNKR 227
Query: 61 VNFPIHDLDLTKYVKSKDGQSYKYNLYAISNHYGGLGG---GHYTAYAKLIDENKWYHFD 117
++FP DL Y+ S Y LYA+ H L GHY Y K N WY D
Sbjct: 228 ISFP-ETFDLGPYMSGGGEGSDVYKLYAVIVHLDMLNASFFGHYICYVKDFRGN-WYRID 285
Query: 118 DSHVTPADEAEIKSSAAYVLFYQRVR 143
DS V + ++ S AY+L Y RV+
Sbjct: 286 DSEVEKVELEDVLSQRAYMLLYSRVQ 311
>AT2G24640.1 | Symbols: UBP19 | ubiquitin-specific protease 19 |
chr2:10475613-10479341 REVERSE LENGTH=672
Length = 672
Score = 80.1 bits (196), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 73/146 (50%), Gaps = 7/146 (4%)
Query: 1 MEAFLTEEPLGPDDMWYCPRCKEHRQATKKLDLWKLPEILVFHLKRFSYSRYLKNKLDTF 60
++ F +E L D+++ C RC ++ +A K+L + P IL LKRF R+ KL+
Sbjct: 340 LDQFTAKEWLQGDNLYKCDRCDDYVKACKRLSIRCAPNILTIALKRFQGGRF--GKLNKR 397
Query: 61 VNFPIHDLDLTKYVKSKDGQSYKYNLYAISNHYGGLGG---GHYTAYAKLIDENKWYHFD 117
++FP DL Y+ S Y LYA+ H L GHY Y K N WY D
Sbjct: 398 ISFP-ETFDLGPYMSGGGEGSDVYKLYAVIVHLDMLNASFFGHYICYVKDFRGN-WYRID 455
Query: 118 DSHVTPADEAEIKSSAAYVLFYQRVR 143
DS V + ++ S AY+L Y RV+
Sbjct: 456 DSEVEKVELEDVLSQRAYMLLYSRVQ 481
>AT5G57990.1 | Symbols: UBP23 | ubiquitin-specific protease 23 |
chr5:23470218-23473997 REVERSE LENGTH=859
Length = 859
Score = 79.7 bits (195), Expect = 5e-16, Method: Composition-based stats.
Identities = 45/130 (34%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
Query: 15 MWYCPRCKEHRQATKKLDLWKLPEILVFHLKRFSYSRYLKNKLDTFVNFPIHDLDLTKYV 74
++ C RCK+ +A K+L + K P +L HLKRF R K+D V+F +D+ +V
Sbjct: 286 VYQCERCKQKVKAKKQLTVSKAPYVLTVHLKRFEAHR--SEKIDRKVDF-TSAIDMKPFV 342
Query: 75 KSKDGQSYKYNLYAISNHYG-GLGGGHYTAYAKLIDENKWYHFDDSHVTPADEAEIKSSA 133
+ KY LY + HYG GHY + + WY DD+ V E + +
Sbjct: 343 SGPHEGNLKYTLYGVLVHYGRSSHSGHYACFVR-TSSGMWYSLDDNRVVQVSEKTVFNQK 401
Query: 134 AYVLFYQRVR 143
AY+LFY R R
Sbjct: 402 AYMLFYVRDR 411
>AT5G65450.1 | Symbols: UBP17 | ubiquitin-specific protease 17 |
chr5:26157863-26161096 FORWARD LENGTH=731
Length = 731
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 8/145 (5%)
Query: 1 MEAFLTEEPLGPDDMWYCPRCKEHRQATKKLDLWKLPEILVFHLKRFSYSRYLKNKLDTF 60
+ F E L ++ ++C RCK +++A KKL + + P IL LKRF + KL
Sbjct: 492 LAQFTAYEVLDGENRYFCGRCKSYQKAKKKLMILEGPNILTVVLKRFQSDNF--GKLSKP 549
Query: 61 VNFPIHDLDLTKYVKSKD-GQSYKYNLYAISNHYGGLG---GGHYTAYAKLIDENKWYHF 116
++FP LD++ Y+ + G Y+LYA+ H + GHY Y K +D + W+
Sbjct: 550 IHFP-ELLDISPYMSDPNHGDHPVYSLYAVVVHLDAMSTLFSGHYVCYIKTLDGD-WFKI 607
Query: 117 DDSHVTPADEAEIKSSAAYVLFYQR 141
DDS+V P + AY+L Y R
Sbjct: 608 DDSNVFPVQLETVLLEGAYMLLYAR 632
>AT2G32780.1 | Symbols: UBP1, ATUBP1 | ubiquitin-specific protease 1 |
chr2:13898431-13901870 REVERSE LENGTH=1083
Length = 1083
Score = 73.6 bits (179), Expect = 4e-14, Method: Composition-based stats.
Identities = 47/133 (35%), Positives = 69/133 (51%), Gaps = 16/133 (12%)
Query: 25 RQATKKLDLWKLPEILVFHLKRFSY-SRYLKNKLDTFVNFPIHDLDLTKYVKSKDGQSYK 83
R A KK+ + K P +L HLKRFS +R +KL V+F +DL+KY+ ++ + +
Sbjct: 952 RDARKKVLINKAPPVLTIHLKRFSQDARGRVSKLSGHVDFQ-EFIDLSKYMDTRCSEEDE 1010
Query: 84 --YNLYAISNHYGGLGGGHYTAY------------AKLIDENKWYHFDDSHVTPADEAEI 129
Y L + H G + GHY +Y K + + WYH DS V PA E+
Sbjct: 1011 PVYRLAGLVEHLGAMSRGHYVSYIRGGHKERRDSDTKEPNSSIWYHASDSQVRPASLEEV 1070
Query: 130 KSSAAYVLFYQRV 142
S AY+LFY+R+
Sbjct: 1071 LRSEAYILFYERI 1083
>AT4G30890.3 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 73.2 bits (178), Expect = 6e-14, Method: Composition-based stats.
Identities = 44/118 (37%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
Query: 27 ATKKLDLWKLPEILVFHLKRFSYSRYLKNKLDTFVNFPIHDLDLTK-YVKSKDGQSYKYN 85
A+K + + KL +I++ HL RFSY KL V FP+ +L+L + ++ S +S +Y
Sbjct: 436 ASKSIKIQKLSKIMILHLMRFSYGSQGSTKLRKGVKFPL-ELNLNRSHLVSLSNESLRYE 494
Query: 86 LYAISNHYG-GLGGGHYTAYAKLIDENKWYHFDDSHVTPADEAEIKSSAAYVLFYQRV 142
L A H+G GHYT A+ +W FDD+ VTP + AYVLFY++V
Sbjct: 495 LVATITHHGWDPSKGHYTTDARR-KNGQWLRFDDASVTPIGTKLVLHDQAYVLFYKQV 551
>AT4G30890.2 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 73.2 bits (178), Expect = 6e-14, Method: Composition-based stats.
Identities = 44/118 (37%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
Query: 27 ATKKLDLWKLPEILVFHLKRFSYSRYLKNKLDTFVNFPIHDLDLTK-YVKSKDGQSYKYN 85
A+K + + KL +I++ HL RFSY KL V FP+ +L+L + ++ S +S +Y
Sbjct: 436 ASKSIKIQKLSKIMILHLMRFSYGSQGSTKLRKGVKFPL-ELNLNRSHLVSLSNESLRYE 494
Query: 86 LYAISNHYG-GLGGGHYTAYAKLIDENKWYHFDDSHVTPADEAEIKSSAAYVLFYQRV 142
L A H+G GHYT A+ +W FDD+ VTP + AYVLFY++V
Sbjct: 495 LVATITHHGWDPSKGHYTTDARR-KNGQWLRFDDASVTPIGTKLVLHDQAYVLFYKQV 551
>AT4G30890.1 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 73.2 bits (178), Expect = 6e-14, Method: Composition-based stats.
Identities = 44/118 (37%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
Query: 27 ATKKLDLWKLPEILVFHLKRFSYSRYLKNKLDTFVNFPIHDLDLTK-YVKSKDGQSYKYN 85
A+K + + KL +I++ HL RFSY KL V FP+ +L+L + ++ S +S +Y
Sbjct: 436 ASKSIKIQKLSKIMILHLMRFSYGSQGSTKLRKGVKFPL-ELNLNRSHLVSLSNESLRYE 494
Query: 86 LYAISNHYG-GLGGGHYTAYAKLIDENKWYHFDDSHVTPADEAEIKSSAAYVLFYQRV 142
L A H+G GHYT A+ +W FDD+ VTP + AYVLFY++V
Sbjct: 495 LVATITHHGWDPSKGHYTTDARR-KNGQWLRFDDASVTPIGTKLVLHDQAYVLFYKQV 551
>AT4G39910.1 | Symbols: ATUBP3, UBP3 | ubiquitin-specific protease 3
| chr4:18511858-18514139 REVERSE LENGTH=371
Length = 371
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 1 MEAFLTEEPLGPDDMWYCPRCKEHRQATKKLDLWKLPEILVFHLKRFSYSRYLK--NKLD 58
++ F + E L +D ++C +C ++A K++ + K P ILV HLKRF Y L KL
Sbjct: 216 LKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLS 275
Query: 59 TFVNFPIHDLDLTKYVKSKDGQSYKYNLYAISNHYG-GLGGGHYTAYAKLIDENKWYHFD 117
V FP+ +L L+ V+ +Y+L+A+ H G G GHY + K N W FD
Sbjct: 276 YRVVFPL-ELKLSNTVEPY--ADVEYSLFAVVVHVGSGPNHGHYVSLVK--SHNHWLFFD 330
Query: 118 DSHVTPADEAEIK------------SSAAYVLFYQRV 142
D +V +E+ ++ + Y+LFY+ +
Sbjct: 331 DENVEMIEESAVQTFFGSSQEYSSNTDHGYILFYESL 367
>AT2G22310.2 | Symbols: UBP4 | ubiquitin-specific protease 4 |
chr2:9476733-9478825 REVERSE LENGTH=379
Length = 379
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 8/134 (5%)
Query: 1 MEAFLTEEPLGPDDMWYCPRCKEHRQATKKLDLWKLPEILVFHLKRFSYSRYLKN--KLD 58
++ F + E L +D ++C +C ++A K++ + K P ILV HLKRF Y L KL
Sbjct: 225 LKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLS 284
Query: 59 TFVNFPIHDLDLTKYVKSKDGQSYKYNLYAISNHYG-GLGGGHYTAYAKLIDENKWYHFD 117
V FP+ +L L+ V + +Y+L+A+ H G G GHY + K N W FD
Sbjct: 285 YRVVFPL-ELKLSNTV--DEYVDIEYSLFAVVVHVGSGPNHGHYVSLVK--SHNHWLFFD 339
Query: 118 DSHVTPADEAEIKS 131
D V +E+ +++
Sbjct: 340 DESVEIIEESAVQT 353
>AT2G22310.1 | Symbols: ATUBP4, UBP4 | ubiquitin-specific protease 4
| chr2:9476733-9478825 REVERSE LENGTH=365
Length = 365
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 8/134 (5%)
Query: 1 MEAFLTEEPLGPDDMWYCPRCKEHRQATKKLDLWKLPEILVFHLKRFSYSRYLKN--KLD 58
++ F + E L +D ++C +C ++A K++ + K P ILV HLKRF Y L KL
Sbjct: 211 LKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLS 270
Query: 59 TFVNFPIHDLDLTKYVKSKDGQSYKYNLYAISNHYG-GLGGGHYTAYAKLIDENKWYHFD 117
V FP+ +L L+ V + +Y+L+A+ H G G GHY + K N W FD
Sbjct: 271 YRVVFPL-ELKLSNTV--DEYVDIEYSLFAVVVHVGSGPNHGHYVSLVK--SHNHWLFFD 325
Query: 118 DSHVTPADEAEIKS 131
D V +E+ +++
Sbjct: 326 DESVEIIEESAVQT 339
>AT1G04860.1 | Symbols: UBP2, ATUBP2 | ubiquitin-specific protease 2
| chr1:1369306-1372290 REVERSE LENGTH=961
Length = 961
Score = 68.9 bits (167), Expect = 1e-12, Method: Composition-based stats.
Identities = 48/131 (36%), Positives = 69/131 (52%), Gaps = 12/131 (9%)
Query: 25 RQATKKLDLWKLPEILVFHLKRFSYS-RYLKNKLDTFVNFPIHDLDLTKYVKSK-DGQSY 82
R ATKK+ + K P +L HLKRFS R +KL+ V F +DL +Y+ S+ G+
Sbjct: 830 RDATKKVLINKAPPVLTIHLKRFSQDLRGRLSKLNGHVAFK-EVIDLRQYMDSRCSGEDP 888
Query: 83 K-YNLYAISNHYGGLGGGHYTAYA------KLIDENK--WYHFDDSHVTPADEAEIKSSA 133
Y L + H G + GGHY AY K D + WY+ D++V ++ S
Sbjct: 889 PVYRLAGLVEHSGTMRGGHYVAYVRGGQRVKETDSSSTAWYNVSDAYVRQVSLEKVLHSE 948
Query: 134 AYVLFYQRVRS 144
AY+LFY+R+ S
Sbjct: 949 AYILFYERIFS 959
>AT3G49600.1 | Symbols: UBP26, SUP32, ATUBP26 | ubiquitin-specific
protease 26 | chr3:18380942-18386662 REVERSE LENGTH=1067
Length = 1067
Score = 64.7 bits (156), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 9/132 (6%)
Query: 4 FLTEEPLGPDDMWYCPRCKEHRQATKKLDLWKLPEILVFHLKR--FSYSRYLKNKLDTFV 61
+L+ E L D+ ++C C AT+ + L LP ++ F LKR F K K+ +
Sbjct: 261 YLSLEQLNGDNQYFCGSCNARVDATRCIKLRTLPPVITFQLKRCIFLPKTTAKKKITSSF 320
Query: 62 NFPIHDLDLTKYVKSKDGQSYKYNLYAISNHYG-GLGGGHYTAYAKLIDENKWYHFDDSH 120
+FP LD+ + Y+L A+ H G + GHY A+ K W+ FDD H
Sbjct: 321 SFP-QVLDMGSRLAESSQNKLTYDLSAVLIHKGSAVNSGHYVAHIKDEKTGLWWEFDDEH 379
Query: 121 VT-----PADEA 127
V+ P +EA
Sbjct: 380 VSELGKRPCNEA 391
>AT3G14400.1 | Symbols: UBP25 | ubiquitin-specific protease 25 |
chr3:4811953-4815210 REVERSE LENGTH=661
Length = 661
Score = 64.3 bits (155), Expect = 3e-11, Method: Composition-based stats.
Identities = 47/144 (32%), Positives = 73/144 (50%), Gaps = 8/144 (5%)
Query: 1 MEAFLTEEPLGPDDMWYCPRCKEHRQATKKLDLWKLPEILVFHLKRFSYSRYLKNKLDTF 60
++ F E L ++ + C C++ A K++ + + P ILV LKRF K+D
Sbjct: 196 LQKFFQSEILDGNNKYRCESCEKLVTARKQMSILQAPNILVIQLKRF--GGIFGGKIDKA 253
Query: 61 VNFPIHDLDLTKYVK--SKDGQSYKYNLYAISNHYG-GLGGGHYTAYAKLIDENKWYHFD 117
++F L L+ ++ SKD Q +Y L+ I H G GHY AY K +WY +
Sbjct: 254 ISFG-EILVLSNFMSKASKDPQP-EYKLFGIIVHSGFSPESGHYYAYVK-DSLGRWYCCN 310
Query: 118 DSHVTPADEAEIKSSAAYVLFYQR 141
DS V+ + E+ S AY+LF+ R
Sbjct: 311 DSFVSLSTLQEVLSEKAYILFFSR 334
>AT4G22285.1 | Symbols: | Ubiquitin C-terminal hydrolases
superfamily protein | chr4:11779063-11781898 REVERSE
LENGTH=541
Length = 541
Score = 63.2 bits (152), Expect = 5e-11, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Query: 35 KLPEILVFHLKRFSYSRYLKNKLDTFVNFPIHDLDLTKYV----KSKDGQSY--KYNLYA 88
K P L+FH+ RF + + K K T VNFP+ D++L Y+ ++ +G++ KYNL A
Sbjct: 426 KSPRYLMFHMVRFKKNNFFKEKNPTLVNFPVKDMELRDYIPSLPRAPEGENVCSKYNLIA 485
Query: 89 ISNHYGGLGGGHYTAYAKLIDENKWYHFDDSHVTPADEAEIKSSAAYVLFYQR 141
H G G++ + + + WY D HV ++ S AY+ Y++
Sbjct: 486 NIVHDGKPEDGYFRVFVQRKSQELWYEMQDLHVAETLPQMVELSEAYMQIYEQ 538
>AT4G22350.2 | Symbols: | Ubiquitin C-terminal hydrolases
superfamily protein | chr4:11804073-11806939 REVERSE
LENGTH=539
Length = 539
Score = 63.2 bits (152), Expect = 6e-11, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Query: 35 KLPEILVFHLKRFSYSRYLKNKLDTFVNFPIHDLDLTKYV----KSKDGQSY--KYNLYA 88
K P L+FH+ RF + + K K T VNFP+ D++L Y+ ++ +G++ KYNL A
Sbjct: 424 KSPRYLMFHMVRFKKNNFFKEKNPTLVNFPVKDMELRDYIPSLPRAPEGENVCSKYNLIA 483
Query: 89 ISNHYGGLGGGHYTAYAKLIDENKWYHFDDSHVTPADEAEIKSSAAYVLFYQR 141
H G G++ + + + WY D HV ++ S AY+ Y++
Sbjct: 484 NIVHDGKPEDGYFRVFVQRKSQELWYEMQDLHVAETLPQMVELSEAYMQIYEQ 536
>AT4G22350.1 | Symbols: | Ubiquitin C-terminal hydrolases
superfamily protein | chr4:11804073-11806939 REVERSE
LENGTH=510
Length = 510
Score = 63.2 bits (152), Expect = 6e-11, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Query: 35 KLPEILVFHLKRFSYSRYLKNKLDTFVNFPIHDLDLTKYV----KSKDGQSY--KYNLYA 88
K P L+FH+ RF + + K K T VNFP+ D++L Y+ ++ +G++ KYNL A
Sbjct: 395 KSPRYLMFHMVRFKKNNFFKEKNPTLVNFPVKDMELRDYIPSLPRAPEGENVCSKYNLIA 454
Query: 89 ISNHYGGLGGGHYTAYAKLIDENKWYHFDDSHVTPADEAEIKSSAAYVLFYQR 141
H G G++ + + + WY D HV ++ S AY+ Y++
Sbjct: 455 NIVHDGKPEDGYFRVFVQRKSQELWYEMQDLHVAETLPQMVELSEAYMQIYEQ 507
>AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2020682-2027834 REVERSE LENGTH=985
Length = 985
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 54/108 (50%), Gaps = 7/108 (6%)
Query: 25 RQATKKLDLWKLPEILVFHLKRFSYS--RYLKNKLDTFVNFPIH-DLDLT--KYVKSKDG 79
+ A K + P +L LKRF Y R K++ FP+ DLD KY+
Sbjct: 373 QDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDREDGKYLSPDAD 432
Query: 80 QSYK--YNLYAISNHYGGLGGGHYTAYAKLIDENKWYHFDDSHVTPAD 125
+S + Y L+++ H GG+ GGHY A+ + ++WY FDD VT D
Sbjct: 433 RSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED 480
>AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2019545-2027834 REVERSE LENGTH=1115
Length = 1115
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 54/108 (50%), Gaps = 7/108 (6%)
Query: 25 RQATKKLDLWKLPEILVFHLKRFSYS--RYLKNKLDTFVNFPIH-DLDLT--KYVKSKDG 79
+ A K + P +L LKRF Y R K++ FP+ DLD KY+
Sbjct: 372 QDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDREDGKYLSPDAD 431
Query: 80 QSYK--YNLYAISNHYGGLGGGHYTAYAKLIDENKWYHFDDSHVTPAD 125
+S + Y L+++ H GG+ GGHY A+ + ++WY FDD VT D
Sbjct: 432 RSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED 479
>AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2019545-2027834 REVERSE LENGTH=1116
Length = 1116
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 54/108 (50%), Gaps = 7/108 (6%)
Query: 25 RQATKKLDLWKLPEILVFHLKRFSYS--RYLKNKLDTFVNFPIH-DLDLT--KYVKSKDG 79
+ A K + P +L LKRF Y R K++ FP+ DLD KY+
Sbjct: 373 QDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDREDGKYLSPDAD 432
Query: 80 QSYK--YNLYAISNHYGGLGGGHYTAYAKLIDENKWYHFDDSHVTPAD 125
+S + Y L+++ H GG+ GGHY A+ + ++WY FDD VT D
Sbjct: 433 RSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED 480
>AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 |
chr3:3761758-3770290 REVERSE LENGTH=1114
Length = 1114
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 7/108 (6%)
Query: 25 RQATKKLDLWKLPEILVFHLKRFSYS--RYLKNKLDTFVNFPIH-DLDLT--KYVKSKDG 79
+ A K + P +L LKRF Y R K++ FP+ DLD +Y+
Sbjct: 371 QDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDREDGRYLSPDAD 430
Query: 80 QSYK--YNLYAISNHYGGLGGGHYTAYAKLIDENKWYHFDDSHVTPAD 125
+S + Y L+++ H GG+ GGHY A+ + ++WY FDD VT D
Sbjct: 431 KSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED 478
>AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 |
chr3:3761758-3770290 REVERSE LENGTH=1115
Length = 1115
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 7/108 (6%)
Query: 25 RQATKKLDLWKLPEILVFHLKRFSYS--RYLKNKLDTFVNFPIH-DLDLT--KYVKSKDG 79
+ A K + P +L LKRF Y R K++ FP+ DLD +Y+
Sbjct: 372 QDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDREDGRYLSPDAD 431
Query: 80 QSYK--YNLYAISNHYGGLGGGHYTAYAKLIDENKWYHFDDSHVTPAD 125
+S + Y L+++ H GG+ GGHY A+ + ++WY FDD VT D
Sbjct: 432 KSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED 479
>AT4G39370.1 | Symbols: UBP27 | ubiquitin-specific protease 27 |
chr4:18306392-18308625 FORWARD LENGTH=494
Length = 494
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 67/156 (42%), Gaps = 33/156 (21%)
Query: 19 PRCKEHRQATKKLDLWKLPEILVFHLKRFSYSRYLKNKLDTFVNFPIHDLDLTKYVKSKD 78
P + K+L + + P++L ++R S++ + + KL + FP+ L+L+ + S
Sbjct: 340 PWSNSYSHILKQLIIARFPKLLCIQVQRASFNMFEEFKLSGHIAFPLV-LNLSLFTPSSI 398
Query: 79 GQSYK--------------------YNLYAISNHYGGLGGGHYTAY--AKLIDEN----- 111
G + + Y L + H+G G GHYT Y ++ +
Sbjct: 399 GVNIEERIEMSSEYQKPEASKNHGMYRLVTVVEHFGRTGSGHYTVYRSVRVFSQEEEEED 458
Query: 112 -----KWYHFDDSHVTPADEAEIKSSAAYVLFYQRV 142
W+ DS V E+++ + A +LFY+R+
Sbjct: 459 CDEDLSWFSISDSEVCRVSESDVLGAEASLLFYERL 494