Miyakogusa Predicted Gene
- Lj5g3v1260880.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1260880.1 tr|I1NIH9|I1NIH9_SOYBN Ubiquitin
carboxyl-terminal hydrolase OS=Glycine max GN=Gma.30282 PE=3
SV=1,83.84,0,seg,NULL; Cysteine proteinases,NULL; UCH_2_1,Peptidase
C19, ubiquitin carboxyl-terminal hydrolase 2,,CUFF.55097.1
(545 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G10570.1 | Symbols: UBP9 | ubiquitin-specific protease 9 | ch... 694 0.0
AT4G10590.1 | Symbols: UBP10 | ubiquitin-specific protease 10 | ... 689 0.0
AT4G10590.2 | Symbols: UBP10 | ubiquitin-specific protease 10 | ... 689 0.0
AT1G32850.1 | Symbols: UBP11 | ubiquitin-specific protease 11 | ... 650 0.0
AT2G40930.1 | Symbols: UBP5, ATUBP5, PDE323 | ubiquitin-specific... 522 e-148
AT5G22030.1 | Symbols: UBP8 | ubiquitin-specific protease 8 | ch... 431 e-121
AT5G22030.2 | Symbols: UBP8 | ubiquitin-specific protease 8 | ch... 431 e-121
AT2G32780.1 | Symbols: UBP1, ATUBP1 | ubiquitin-specific proteas... 94 2e-19
AT1G04860.1 | Symbols: UBP2, ATUBP2 | ubiquitin-specific proteas... 92 1e-18
AT3G14400.1 | Symbols: UBP25 | ubiquitin-specific protease 25 | ... 68 2e-11
AT5G10790.1 | Symbols: UBP22 | ubiquitin-specific protease 22 | ... 68 2e-11
AT5G57990.1 | Symbols: UBP23 | ubiquitin-specific protease 23 | ... 65 1e-10
AT4G17895.1 | Symbols: UBP20 | ubiquitin-specific protease 20 | ... 63 6e-10
AT4G30890.3 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 60 6e-09
AT4G30890.2 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 60 6e-09
AT4G30890.1 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 60 6e-09
AT2G22310.1 | Symbols: ATUBP4, UBP4 | ubiquitin-specific proteas... 59 1e-08
AT4G22350.1 | Symbols: | Ubiquitin C-terminal hydrolases superf... 57 3e-08
AT4G22350.2 | Symbols: | Ubiquitin C-terminal hydrolases superf... 57 4e-08
AT5G46740.1 | Symbols: UBP21 | ubiquitin-specific protease 21 | ... 56 6e-08
AT4G39910.1 | Symbols: ATUBP3, UBP3 | ubiquitin-specific proteas... 55 2e-07
AT4G22285.1 | Symbols: | Ubiquitin C-terminal hydrolases superf... 54 3e-07
AT1G51710.1 | Symbols: UBP6, ATUBP6 | ubiquitin-specific proteas... 52 1e-06
AT1G51710.2 | Symbols: UBP6 | ubiquitin-specific protease 6 | ch... 52 1e-06
AT3G21280.1 | Symbols: UBP7 | ubiquitin-specific protease 7 | ch... 51 2e-06
>AT4G10570.1 | Symbols: UBP9 | ubiquitin-specific protease 9 |
chr4:6523657-6528058 REVERSE LENGTH=923
Length = 923
Score = 694 bits (1791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/540 (62%), Positives = 415/540 (76%), Gaps = 20/540 (3%)
Query: 6 KDXWERLLEWYKGGPALPRKVISQGVGQKQYSVEVYPLSLKVTDARDNSQSIVQLSKQAT 65
K W+RL+EWY GGP + RK+I QG + YSVEVYPL L +TD RD S+++++L KQA+
Sbjct: 113 KQVWKRLVEWYSGGPPIERKLICQGFYTRSYSVEVYPLCLMLTDGRDESRTVIRLGKQAS 172
Query: 66 IRELYELVCKVKGLEQNKACLWDYFNLNKDSVLE-VSDQTLEDANLSMDQDIXXXXXXXX 124
IRELYE VC + G+ Q KA +WDYF+ K+ +L+ +S ++LE+++L MDQDI
Sbjct: 173 IRELYEKVCAMTGVPQEKAHIWDYFDKRKNGLLDPLSYKSLEESSLHMDQDILVEVDGLS 232
Query: 125 XXXXXXXXXXMGNELALVPLEPSRSSMSIAGGPTMSNGHSAGSSFNLYQGSSVSSSLTNM 184
GNELALVPLEPSRS ++IAGGPT+SNGHS S+F+L+ +T+
Sbjct: 233 SSSQSAMSS-TGNELALVPLEPSRSIVTIAGGPTLSNGHSTTSNFSLF------PRITSE 285
Query: 185 DDKHDAY----RGERGGLAGLQNLGNTCFMNSSLQCLVHTPPLVEFFLQDYSEEINMDNP 240
DD D+ +GE+GGLAGL NLGNTCFMNS+LQCL HTPP+VE+FLQDYS++IN DNP
Sbjct: 286 DDGRDSLSILGKGEKGGLAGLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDINRDNP 345
Query: 241 LGMRGELALAFGDLLRKLWSSGRTAIAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDG 300
LGM GELA+AFGDLL+KLWSSGR A+APRAFK KLARFAPQFSGYNQHDSQELLAFLLDG
Sbjct: 346 LGMCGELAIAFGDLLKKLWSSGRNAVAPRAFKTKLARFAPQFSGYNQHDSQELLAFLLDG 405
Query: 301 LHEDLNRVKQKPYIEMKDTDGRPDEEVAYECWKNHMARNDSLIVDVCQGQYKSTLVCPVC 360
LHEDLN+VK+KPYIE+KD+D RPD+EVA E W H ARNDS+IVDVCQGQYKSTLVCPVC
Sbjct: 406 LHEDLNKVKRKPYIELKDSDSRPDDEVAEELWNYHKARNDSVIVDVCQGQYKSTLVCPVC 465
Query: 361 GKISITFDPFMYLSLPLPSTVTRTMTVTIFYSDGSGLPMPYTVNVLKHGCCRDLCQALGI 420
GKISITFDPFMYLS+PLPST+TR+MT+T+FY DGS LPMPYTV V K G RDL ALG
Sbjct: 466 GKISITFDPFMYLSVPLPSTLTRSMTITVFYCDGSRLPMPYTVIVPKQGSIRDLITALGT 525
Query: 421 ACCLKSDEMLLLAEVYEHKIYRYLDNALESLTSIKDDEHIVAYRLKS---GARKTKIEVM 477
ACCL DE LLLAEVY+HKI+RY + L+SL++IKDDEHIVAYRL G+RK K+E++
Sbjct: 526 ACCLAEDESLLLAEVYDHKIFRYFEIPLDSLSAIKDDEHIVAYRLNQIPKGSRKAKLEIL 585
Query: 478 H-----RWMDKMKGGERKLFGTPLVTYLVENPQYGADIEESVHKLLAPLRKAYSSTKSHD 532
H +D ++G + KLFGTP VTY+ P G DI+ + L+PL K ++ +K H+
Sbjct: 586 HGGQERAVLDSVRGSDVKLFGTPFVTYVNTEPLSGTDIDAVISGFLSPLHKVHAPSKIHN 645
>AT4G10590.1 | Symbols: UBP10 | ubiquitin-specific protease 10 |
chr4:6538919-6543272 REVERSE LENGTH=910
Length = 910
Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/549 (61%), Positives = 422/549 (76%), Gaps = 23/549 (4%)
Query: 6 KDXWERLLEWYKGGPALPRKVISQGVGQKQYSVEVYPLSLKVTDARDNSQSIVQLSKQAT 65
++ W+RL+EWY GGP + RK+I QG + YSVEVYPL L +TD RD S+++++L KQA+
Sbjct: 113 QEVWKRLVEWYSGGPPIERKLICQGFYTRSYSVEVYPLCLMLTDGRDESRTVIRLGKQAS 172
Query: 66 IRELYELVCKVKGLEQNKACLWDYFNLNKDSVLE-VSDQTLEDANLSMDQDIXXXXXXXX 124
IRELYE VC + G+ Q KA +WDYF+ K+ +L+ +S ++LE+++L MDQDI
Sbjct: 173 IRELYEKVCALTGVPQEKAHIWDYFDKRKNGLLDSLSYKSLEESSLHMDQDILLEVDGSS 232
Query: 125 XXXXXXXXXXMGNELALVPLEPSRSSMSIAGGPTMSNGHSAGSSFNLYQGSSVSSSLTNM 184
GNELALVPLEPSRSS++IAGGPT+SNGHS S+F+L+ +T+
Sbjct: 233 SSQSAMSS--TGNELALVPLEPSRSSVTIAGGPTLSNGHSTTSNFSLF------PRITSE 284
Query: 185 DDKHDAY----RGERGGLAGLQNLGNTCFMNSSLQCLVHTPPLVEFFLQDYSEEINMDNP 240
DD ++ +GE+GGLAGL NLGNTCFMNS+LQCL HTPP+VE+FLQDYS++IN DNP
Sbjct: 285 DDGSNSLSILGKGEKGGLAGLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDINRDNP 344
Query: 241 LGMRGELALAFGDLLRKLWSSGRTAIAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDG 300
LGM GELA+AFGDLL+KLWSSGR ++APRAFK KLARFAPQFSGYNQHDSQELLAFLLDG
Sbjct: 345 LGMCGELAIAFGDLLKKLWSSGRNSVAPRAFKTKLARFAPQFSGYNQHDSQELLAFLLDG 404
Query: 301 LHEDLNRVKQKPYIEMKDTDGRPDEEVAYECWKNHMARNDSLIVDVCQGQYKSTLVCPVC 360
LHEDLN+VK+KPYIE+KD+D RPD+EVA E W H ARNDS+IVDVCQGQYKSTLVCP C
Sbjct: 405 LHEDLNKVKRKPYIELKDSDSRPDDEVAEELWNYHKARNDSVIVDVCQGQYKSTLVCPAC 464
Query: 361 GKISITFDPFMYLSLPLPSTVTRTMTVTIFYSDGSGLPMPYTVNVLKHGCCRDLCQALGI 420
GKISITFDPFMYLS+PLPST+TR+MTVT+FY DGS LPMPYTV V K+G RDL ALG
Sbjct: 465 GKISITFDPFMYLSVPLPSTLTRSMTVTVFYCDGSHLPMPYTVIVPKNGSIRDLITALGT 524
Query: 421 ACCLKSDEMLLLAEVYEHKIYRYLDNALESLTSIKDDEHIVAYRLKS---GARKTKIEVM 477
AC L DE LLLAEVY+HKI++Y +N L+SL+SIKDDEHIVAYRL G+ K K+E++
Sbjct: 525 ACLLAEDESLLLAEVYDHKIFKYFENPLDSLSSIKDDEHIVAYRLNQMPKGSGKAKLEIL 584
Query: 478 H-----RWMDKMKGGERKLFGTPLVTYLVENPQYGADIEESVHKLLAPLRKAYSSTKSHD 532
H ++ ++G + KLFGTP VTY+ P GADI+ + + L+PL K ++ +K H+
Sbjct: 585 HGGQKRPILESVRGRDVKLFGTPFVTYVNTEPLSGADIDAVLSRFLSPLHKVHAPSKIHN 644
Query: 533 DDEKENGFI 541
ENG +
Sbjct: 645 G--SENGHL 651
>AT4G10590.2 | Symbols: UBP10 | ubiquitin-specific protease 10 |
chr4:6538919-6543272 REVERSE LENGTH=910
Length = 910
Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/549 (61%), Positives = 422/549 (76%), Gaps = 23/549 (4%)
Query: 6 KDXWERLLEWYKGGPALPRKVISQGVGQKQYSVEVYPLSLKVTDARDNSQSIVQLSKQAT 65
++ W+RL+EWY GGP + RK+I QG + YSVEVYPL L +TD RD S+++++L KQA+
Sbjct: 113 QEVWKRLVEWYSGGPPIERKLICQGFYTRSYSVEVYPLCLMLTDGRDESRTVIRLGKQAS 172
Query: 66 IRELYELVCKVKGLEQNKACLWDYFNLNKDSVLE-VSDQTLEDANLSMDQDIXXXXXXXX 124
IRELYE VC + G+ Q KA +WDYF+ K+ +L+ +S ++LE+++L MDQDI
Sbjct: 173 IRELYEKVCALTGVPQEKAHIWDYFDKRKNGLLDSLSYKSLEESSLHMDQDILLEVDGSS 232
Query: 125 XXXXXXXXXXMGNELALVPLEPSRSSMSIAGGPTMSNGHSAGSSFNLYQGSSVSSSLTNM 184
GNELALVPLEPSRSS++IAGGPT+SNGHS S+F+L+ +T+
Sbjct: 233 SSQSAMSS--TGNELALVPLEPSRSSVTIAGGPTLSNGHSTTSNFSLF------PRITSE 284
Query: 185 DDKHDAY----RGERGGLAGLQNLGNTCFMNSSLQCLVHTPPLVEFFLQDYSEEINMDNP 240
DD ++ +GE+GGLAGL NLGNTCFMNS+LQCL HTPP+VE+FLQDYS++IN DNP
Sbjct: 285 DDGSNSLSILGKGEKGGLAGLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDINRDNP 344
Query: 241 LGMRGELALAFGDLLRKLWSSGRTAIAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDG 300
LGM GELA+AFGDLL+KLWSSGR ++APRAFK KLARFAPQFSGYNQHDSQELLAFLLDG
Sbjct: 345 LGMCGELAIAFGDLLKKLWSSGRNSVAPRAFKTKLARFAPQFSGYNQHDSQELLAFLLDG 404
Query: 301 LHEDLNRVKQKPYIEMKDTDGRPDEEVAYECWKNHMARNDSLIVDVCQGQYKSTLVCPVC 360
LHEDLN+VK+KPYIE+KD+D RPD+EVA E W H ARNDS+IVDVCQGQYKSTLVCP C
Sbjct: 405 LHEDLNKVKRKPYIELKDSDSRPDDEVAEELWNYHKARNDSVIVDVCQGQYKSTLVCPAC 464
Query: 361 GKISITFDPFMYLSLPLPSTVTRTMTVTIFYSDGSGLPMPYTVNVLKHGCCRDLCQALGI 420
GKISITFDPFMYLS+PLPST+TR+MTVT+FY DGS LPMPYTV V K+G RDL ALG
Sbjct: 465 GKISITFDPFMYLSVPLPSTLTRSMTVTVFYCDGSHLPMPYTVIVPKNGSIRDLITALGT 524
Query: 421 ACCLKSDEMLLLAEVYEHKIYRYLDNALESLTSIKDDEHIVAYRLKS---GARKTKIEVM 477
AC L DE LLLAEVY+HKI++Y +N L+SL+SIKDDEHIVAYRL G+ K K+E++
Sbjct: 525 ACLLAEDESLLLAEVYDHKIFKYFENPLDSLSSIKDDEHIVAYRLNQMPKGSGKAKLEIL 584
Query: 478 H-----RWMDKMKGGERKLFGTPLVTYLVENPQYGADIEESVHKLLAPLRKAYSSTKSHD 532
H ++ ++G + KLFGTP VTY+ P GADI+ + + L+PL K ++ +K H+
Sbjct: 585 HGGQKRPILESVRGRDVKLFGTPFVTYVNTEPLSGADIDAVLSRFLSPLHKVHAPSKIHN 644
Query: 533 DDEKENGFI 541
ENG +
Sbjct: 645 G--SENGHL 651
>AT1G32850.1 | Symbols: UBP11 | ubiquitin-specific protease 11 |
chr1:11902629-11906900 FORWARD LENGTH=892
Length = 892
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/540 (60%), Positives = 396/540 (73%), Gaps = 19/540 (3%)
Query: 1 MLEEGKD-------XWERLLEWYKGGPALPRKVISQGVGQKQYSVEVYPLSLKVTDARDN 53
MLEEG D W +L++WYKGGP +PRK+ISQG K +SVEVY L L +TD+RD
Sbjct: 99 MLEEGVDYTLVQQEVWRKLVKWYKGGPPVPRKLISQGFYTKSFSVEVYLLCLTLTDSRDE 158
Query: 54 SQSIVQLSKQATIRELYELVCKVKGLEQNKACLWDYFNLNKDSVLE-VSDQTLEDANLSM 112
S +I++LSKQA+I +LYE+VC KG+ + KA +WDYF K +L+ S+Q++E+A L
Sbjct: 159 STTIIRLSKQASIGQLYEMVCAGKGVAKEKARIWDYFEKKKSVLLDPSSEQSVEEAGLQF 218
Query: 113 DQDIXXXXXXXXXXXXXXXXXXMGNELALVPLEPSRS-SMSIA-GGPTMSNGHSAGSSFN 170
+QDI NELA+VPLEP RS +M I GG T+SNGHS G F+
Sbjct: 219 NQDILLEVDGSASSQFVMSLAE--NELAMVPLEPMRSDAMDIVRGGGTLSNGHSNGFKFS 276
Query: 171 LYQGSSVSSSLTNMDDKHDAYRGERGGLAGLQNLGNTCFMNSSLQCLVHTPPLVEFFLQD 230
+ ++ +++ +GE+ GL GLQNLGNTCFMNS+LQCL HTPP+VE+FLQD
Sbjct: 277 FFGRNTFKDDVSS----RTFGKGEKRGLGGLQNLGNTCFMNSTLQCLAHTPPIVEYFLQD 332
Query: 231 YSEEINMDNPLGMRGELALAFGDLLRKLWSSGRTAIAPRAFKGKLARFAPQFSGYNQHDS 290
Y +IN NPLGMRGELA+AFG+LLRKLWSSG+ +APRAFK KLARFAPQFSGYNQHDS
Sbjct: 333 YRSDINAKNPLGMRGELAIAFGELLRKLWSSGQNTVAPRAFKTKLARFAPQFSGYNQHDS 392
Query: 291 QELLAFLLDGLHEDLNRVKQKPYIEMKDTDGRPDEEVAYECWKNHMARNDSLIVDVCQGQ 350
QE+LAFLLDGLHEDLN+VK+KPYIE KD+DGRPD+EVA E WK H ARNDS+IVDV QGQ
Sbjct: 393 QEMLAFLLDGLHEDLNKVKRKPYIEAKDSDGRPDDEVAEEKWKYHKARNDSVIVDVFQGQ 452
Query: 351 YKSTLVCPVCGKISITFDPFMYLSLPLPSTVTRTMTVTIFYSDGSGLPMPYTVNVLKHGC 410
YKSTLVCP CGKISITFDPFMYLSLPLPS+ TR+MTVT+FY DGS LPMPYTV V K G
Sbjct: 453 YKSTLVCPDCGKISITFDPFMYLSLPLPSSRTRSMTVTVFYGDGSHLPMPYTVTVPKDGS 512
Query: 411 CRDLCQALGIACCLKSDEMLLLAEVYEHKIYRYLDNALESLTSIKDDEHIVAYRLKS--- 467
CRDL ALG ACCL +DE LLLAEVY+HK+++Y +N E L IKD+EHIVAYR K
Sbjct: 513 CRDLSNALGTACCLDNDESLLLAEVYDHKVFKYYENPRELLNGIKDNEHIVAYRFKQMHK 572
Query: 468 GARKTKIEVMHRWMDKMKGGERKLFGTPLVTYLVENPQYGADIEESVHKLLAPLRKAYSS 527
G K K+E++H +K K FGTPLVTY+ + P G DI S+ LL+PLR+ + S
Sbjct: 573 GPGKVKLEILHGEQEKSSDRGPKCFGTPLVTYINKEPLSGTDIATSISGLLSPLRRVHMS 632
>AT2G40930.1 | Symbols: UBP5, ATUBP5, PDE323 | ubiquitin-specific
protease 5 | chr2:17076714-17082192 REVERSE LENGTH=924
Length = 924
Score = 522 bits (1345), Expect = e-148, Method: Compositional matrix adjust.
Identities = 276/553 (49%), Positives = 345/553 (62%), Gaps = 25/553 (4%)
Query: 2 LEEGKD-------XWERLLEWYKGGPALPRKVISQGVGQKQYSVEVYPLSLKVTDARDNS 54
L+EG+D W +L WY GGP L R+VIS G+ Q + +VEVYPL L++ +
Sbjct: 112 LQEGRDYVLLPQEVWNQLRSWYGGGPTLARRVISSGLSQTELAVEVYPLRLQLLLMPKSD 171
Query: 55 QSIVQLSKQATIRELYELVCKVKGLEQNKACLWDYFNLNKDSVLEVSDQTLEDANLSMDQ 114
S +++SK+ TIREL+ C++ L+ +WDY+ K S++ D+TL+DANL MDQ
Sbjct: 172 HSAIRISKKETIRELHRRACEIFDLDSEHVRIWDYYGHQKYSLMNDLDKTLDDANLQMDQ 231
Query: 115 DIXXX------XXXXXXXXXXXXXXXMGNELALVPLEPSRSSMSIAGGPTMSNGHSAGSS 168
DI + + + +EPS+SS++ AGG + S S
Sbjct: 232 DILVEVLDINGTLSSAHIQSAQENGLVDGDSTSILIEPSKSSLAAAGGFSSSRNAFRTGS 291
Query: 169 FNLYQGSSVSSSLTNMDDKHDAYRGERGGLAGLQNLGNTCFMNSSLQCLVHTPPLVEFFL 228
+ Q + S T + RG GL GL NLGNTCFMNS++QCLVHTP +F
Sbjct: 292 VEVSQSFDNTYSSTGV-----TTRGSTAGLTGLLNLGNTCFMNSAIQCLVHTPEFASYFQ 346
Query: 229 QDYSEEINMDNPLGMRGELALAFGDLLRKLWSSGRTAIAPRAFKGKLARFAPQFSGYNQH 288
+DY +EIN NPLGM GELALAFGDLLRKLW+ GRT IAPR FK KLARFAPQFSGYNQH
Sbjct: 347 EDYHQEINWQNPLGMVGELALAFGDLLRKLWAPGRTPIAPRPFKAKLARFAPQFSGYNQH 406
Query: 289 DSQELLAFLLDGLHEDLNRVKQKPYIEMKDTDGRPDEEVAYECWKNHMARNDSLIVDVCQ 348
DSQELLAFLLDGLHEDLNRVK KPYI +D DGRPDEEVA E WKNH+ARNDS+IVDVCQ
Sbjct: 407 DSQELLAFLLDGLHEDLNRVKHKPYINSRDADGRPDEEVADEFWKNHIARNDSIIVDVCQ 466
Query: 349 GQYKSTLVCPVCGKISITFDPFMYLSLPLPSTVTRTMTVTIFYSDGSGLPMPYTVNVLKH 408
GQYKSTLVCP+C K+S+TFDPFMYLSLPL TR +TVT+F D + LP TVNV K
Sbjct: 467 GQYKSTLVCPICNKVSVTFDPFMYLSLPLQFNTTRAITVTVFSCDKTALPSTITVNVSKQ 526
Query: 409 GCCRDLCQALGIACCLKSDEMLLLAEVYEHKIYRYLDNALESLTSIKDDEHIVAYRLKSG 468
G CRDL QAL AC LK E L LAE+ + I+R ++ L L+SIKDD+H+ AY+L
Sbjct: 527 GRCRDLIQALTNACSLKQSEELKLAEIRNNFIHRLFEDPLIPLSSIKDDDHLAAYKLSKS 586
Query: 469 ARKTKIEVMHRWMDKMKGGER------KLFGTPLVTYL-VENPQYGADIEESVHKLLAPL 521
+ T + + K GER K GTPL++ + I V +L+P
Sbjct: 587 SENTTLLRLVLRRRDQKAGERESTVQLKPCGTPLLSSASCGDALTKGKIHCLVQNMLSPF 646
Query: 522 RKAYSSTKSHDDD 534
R+ S K + D
Sbjct: 647 RREESVGKKGNSD 659
>AT5G22030.1 | Symbols: UBP8 | ubiquitin-specific protease 8 |
chr5:7290155-7296344 REVERSE LENGTH=913
Length = 913
Score = 431 bits (1109), Expect = e-121, Method: Compositional matrix adjust.
Identities = 219/374 (58%), Positives = 269/374 (71%), Gaps = 22/374 (5%)
Query: 159 MSNGHSAGSSFNLYQGSSVSSSLTNMDDKHDAYRGERG--GLAGLQNLGNTCFMNSSLQC 216
++NG + G+ F + +S+S GE G GL GLQNLGNTCFMNSSLQC
Sbjct: 288 ITNGMNGGTVFRFGRSNSLS---------FLGKAGEAGTLGLTGLQNLGNTCFMNSSLQC 338
Query: 217 LVHTPPLVEFFLQDYSEEINMDNPLGMRGELALAFGDLLRKLWSSGRTAIAPRAFKGKLA 276
L HTP LV+FFL +YS+EIN+DNPLGM+GE+ALAFGDLLR LW+ G + +APR FK KLA
Sbjct: 339 LAHTPKLVDFFLGEYSKEINLDNPLGMKGEIALAFGDLLRSLWAPGASTVAPRTFKAKLA 398
Query: 277 RFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDTDGRPDEEVAYECWKNHM 336
RFAPQFSG+NQHDSQELLAFLLDGLHEDLNRVK KPY+E KD DGRPD EVA E W+NH+
Sbjct: 399 RFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKNKPYVEAKDGDGRPDAEVADEYWRNHV 458
Query: 337 ARNDSLIVDVCQGQYKSTLVCPVCGKISITFDPFMYLSLPLPSTVTRTMTVTIFYSDGSG 396
ARNDS+IVDVCQGQYKSTLVCP+C K+S+ FDPFMYLSLPLP T RTM +T+ +DGS
Sbjct: 459 ARNDSIIVDVCQGQYKSTLVCPICKKVSVMFDPFMYLSLPLPCTSMRTMDLTVMSADGSS 518
Query: 397 LPMPYTVNVLKHGCCRDLCQALGIACCLKSDEMLLLAEVYEHKIYRYLDNALESLTSIKD 456
LP+P TVNV K G DL +AL AC L +E LL+ EVY ++I R+L+ +SLT I+D
Sbjct: 519 LPIPLTVNVPKFGKFEDLHKALVTACSLPEEETLLVTEVYNNRIIRFLEEPTDSLTLIRD 578
Query: 457 DEHIVAYRLKSGARKTKIEV-MHRWMDKM-----KGGERKLFGTPLVTYL--VENPQYGA 508
+ +V YRLK A + + V MH+ +++ K FG PLV+ L VEN G+
Sbjct: 579 GDKLVVYRLKKDANNSPLIVYMHQKLEEQFISGKSSPTWKAFGIPLVSRLCDVEN---GS 635
Query: 509 DIEESVHKLLAPLR 522
D+E KLL+ +
Sbjct: 636 DVENLYLKLLSSFK 649
>AT5G22030.2 | Symbols: UBP8 | ubiquitin-specific protease 8 |
chr5:7290155-7296344 REVERSE LENGTH=913
Length = 913
Score = 431 bits (1109), Expect = e-121, Method: Compositional matrix adjust.
Identities = 219/374 (58%), Positives = 269/374 (71%), Gaps = 22/374 (5%)
Query: 159 MSNGHSAGSSFNLYQGSSVSSSLTNMDDKHDAYRGERG--GLAGLQNLGNTCFMNSSLQC 216
++NG + G+ F + +S+S GE G GL GLQNLGNTCFMNSSLQC
Sbjct: 288 ITNGMNGGTVFRFGRSNSLS---------FLGKAGEAGTLGLTGLQNLGNTCFMNSSLQC 338
Query: 217 LVHTPPLVEFFLQDYSEEINMDNPLGMRGELALAFGDLLRKLWSSGRTAIAPRAFKGKLA 276
L HTP LV+FFL +YS+EIN+DNPLGM+GE+ALAFGDLLR LW+ G + +APR FK KLA
Sbjct: 339 LAHTPKLVDFFLGEYSKEINLDNPLGMKGEIALAFGDLLRSLWAPGASTVAPRTFKAKLA 398
Query: 277 RFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDTDGRPDEEVAYECWKNHM 336
RFAPQFSG+NQHDSQELLAFLLDGLHEDLNRVK KPY+E KD DGRPD EVA E W+NH+
Sbjct: 399 RFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKNKPYVEAKDGDGRPDAEVADEYWRNHV 458
Query: 337 ARNDSLIVDVCQGQYKSTLVCPVCGKISITFDPFMYLSLPLPSTVTRTMTVTIFYSDGSG 396
ARNDS+IVDVCQGQYKSTLVCP+C K+S+ FDPFMYLSLPLP T RTM +T+ +DGS
Sbjct: 459 ARNDSIIVDVCQGQYKSTLVCPICKKVSVMFDPFMYLSLPLPCTSMRTMDLTVMSADGSS 518
Query: 397 LPMPYTVNVLKHGCCRDLCQALGIACCLKSDEMLLLAEVYEHKIYRYLDNALESLTSIKD 456
LP+P TVNV K G DL +AL AC L +E LL+ EVY ++I R+L+ +SLT I+D
Sbjct: 519 LPIPLTVNVPKFGKFEDLHKALVTACSLPEEETLLVTEVYNNRIIRFLEEPTDSLTLIRD 578
Query: 457 DEHIVAYRLKSGARKTKIEV-MHRWMDKM-----KGGERKLFGTPLVTYL--VENPQYGA 508
+ +V YRLK A + + V MH+ +++ K FG PLV+ L VEN G+
Sbjct: 579 GDKLVVYRLKKDANNSPLIVYMHQKLEEQFISGKSSPTWKAFGIPLVSRLCDVEN---GS 635
Query: 509 DIEESVHKLLAPLR 522
D+E KLL+ +
Sbjct: 636 DVENLYLKLLSSFK 649
>AT2G32780.1 | Symbols: UBP1, ATUBP1 | ubiquitin-specific protease 1
| chr2:13898431-13901870 REVERSE LENGTH=1083
Length = 1083
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 94/190 (49%), Gaps = 28/190 (14%)
Query: 195 RGGLA--GLQNLGNTCFMNSSLQCLVHTPPLVEFFLQDYSEEINMDNPLGMRGELALAFG 252
R G A GL NLGNTCF NS +Q L+ L E FL++ L + G L +
Sbjct: 196 RDGYAVRGLVNLGNTCFFNSVMQNLLSLDQLREHFLKE---------DLSVSGPLVSSLK 246
Query: 253 DLLRKLWSSG---RTAIAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 309
+L + S R I PR + APQF GY QHDS ELL LLDGL + + ++
Sbjct: 247 ELFAESNSEASVFRNEINPRDLFFSVCSQAPQFRGYQQHDSHELLRCLLDGLSIEESSLR 306
Query: 310 QKPYIEMKDTDGRPDEEVAYECWKNHMARNDSLIVDVCQGQYKSTLVCPVCGKISITFDP 369
+K + + D++ + + +LI V G+ ST+ C CG S ++P
Sbjct: 307 KK--LGVSDSN------------DSSTYQKPTLIDSVFGGEISSTVSCLECGHFSKVYEP 352
Query: 370 FMYLSLPLPS 379
FM LSLP+PS
Sbjct: 353 FMDLSLPVPS 362
>AT1G04860.1 | Symbols: UBP2, ATUBP2 | ubiquitin-specific protease 2
| chr1:1369306-1372290 REVERSE LENGTH=961
Length = 961
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 91/184 (49%), Gaps = 36/184 (19%)
Query: 198 LAGLQNLGNTCFMNSSLQCLVHTPPLVEFFLQDYSEEINMDNPLGMRGELALAFGDLLRK 257
+ GL NLGNTCF NS +Q L+ L + FL++ N G+ G LA + LRK
Sbjct: 230 VRGLVNLGNTCFFNSIMQNLLSLDRLRDHFLKE--------NGSGVGGPLASS----LRK 277
Query: 258 LWSSGR------TAIAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 311
L++ + + I PRAF G APQF GY+QHDS ELL LLD L + + +++K
Sbjct: 278 LFTETKPEAGLKSVINPRAFFGSFCSKAPQFRGYDQHDSHELLRCLLDSLSTEESALRKK 337
Query: 312 PYIEMKDTDGRPDEEVAYECWKNHMARNDSLIVDVCQGQYKSTLVCPVCGKISITFDPFM 371
+ D ++ +LI V G+ S + C CG S ++PF+
Sbjct: 338 RGVSDND------------------EKSTTLIESVFGGETSSIVSCMECGHSSKVYEPFL 379
Query: 372 YLSL 375
LSL
Sbjct: 380 DLSL 383
>AT3G14400.1 | Symbols: UBP25 | ubiquitin-specific protease 25 |
chr3:4811953-4815210 REVERSE LENGTH=661
Length = 661
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 84/195 (43%), Gaps = 22/195 (11%)
Query: 200 GLQNLGNTCFMNSSLQCLVHTPPLVEFFL-QDYSEEIN--MDNPLGMRGELALAFGDLLR 256
GL+NLGNTC++NS LQCL TPPL F L +S + +D + + R
Sbjct: 25 GLRNLGNTCYLNSVLQCLTFTPPLANFCLTHKHSSHCDTYVDGERKRDCPFCIVEKRIAR 84
Query: 257 KLWSSGRTAIAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEM 316
L S T AP L FA F Q D+ E L +++D H R+K+ Y
Sbjct: 85 SL-SVDLTTDAPNKISSCLKIFAEHFKLGRQEDAHEFLRYVIDACHNTSLRLKKLRYNGN 143
Query: 317 KDTDGRPDEEVAYECWKNHMARNDSLIVDVCQGQYKSTLVCPVCGKISITFDPFMYLSLP 376
+ +G +S++ ++ G +S + C CG S D M +SL
Sbjct: 144 EPFNG------------------NSVVKEIFGGALQSQVKCLSCGAESNKADEIMDISLE 185
Query: 377 LPSTVTRTMTVTIFY 391
+ + + ++ F+
Sbjct: 186 ILQSSSVKESLQKFF 200
>AT5G10790.1 | Symbols: UBP22 | ubiquitin-specific protease 22 |
chr5:3410638-3412559 FORWARD LENGTH=557
Length = 557
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 197 GLAGLQNLGNTCFMNSSLQCLVHTPPLVEFFLQDYSEEINMD-NPLGMRGELALA--FGD 253
GL GL NLG+TCFMN+ LQ LVH PPL F+L S + N D P G L L
Sbjct: 175 GLRGLNNLGSTCFMNAVLQALVHAPPLRNFWL---SGQHNRDLCPRRTMGLLCLPCDLDV 231
Query: 254 LLRKLWSSGRTAIAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 309
+ ++S RT +P + + + Y Q DS E LLD +HE+ + K
Sbjct: 232 IFSAMFSGDRTPYSPAHLLYSWWQHSTNLATYEQQDSHEFFISLLDRIHENEGKSK 287
>AT5G57990.1 | Symbols: UBP23 | ubiquitin-specific protease 23 |
chr5:23470218-23473997 REVERSE LENGTH=859
Length = 859
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 77/180 (42%), Gaps = 26/180 (14%)
Query: 199 AGLQNLGNTCFMNSSLQCLVHTPPLVEFFLQDYSEEINMDNPLGMRGELAL-AFGDLLRK 257
AGLQNLGNTCF+NS LQCL +T PL LQ + + + G AL A +R
Sbjct: 107 AGLQNLGNTCFLNSVLQCLTYTEPLAA-TLQTAAHQ----KYCHVAGFCALCAIQKHVRT 161
Query: 258 LWSSGRTAIAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMK 317
+ +AP+ L + F Q D+ E + LL+ +H +
Sbjct: 162 ARQANGRILAPKDLVSNLRCISRNFRNCRQEDAHEYMINLLECMH------------KCS 209
Query: 318 DTDGRPDEEVAYECWKNHMARNDSLIVDVCQGQYKSTLVCPVCGKISITFDPFMYLSLPL 377
G P E + A SL+ + G +S + C C S FDPF+ LSL +
Sbjct: 210 LPSGVPSE--------SSDAYRRSLVHKIFGGSLRSQVKCEQCSHCSNKFDPFLDLSLDI 261
>AT4G17895.1 | Symbols: UBP20 | ubiquitin-specific protease 20 |
chr4:9939914-9942698 FORWARD LENGTH=695
Length = 695
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 73/184 (39%), Gaps = 36/184 (19%)
Query: 196 GGLAGLQNLGNTCFMNSSLQCLVHTPPLVEFFLQDYSEEINMDNPLGMRGELALAFGDLL 255
G AGL NLGN+CF+NS QC HT PL+E L + P E +
Sbjct: 173 GVGAGLWNLGNSCFLNSVFQCFTHTVPLIESLLS-----FRYEVPCHCGNEFFCVIRAIR 227
Query: 256 RKLWSS---GRTAIAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKP 312
+ ++ R IAP F L F+P F Y Q D+ E L L+ L
Sbjct: 228 YHIEAALRPERCPIAPYFFFDNLNYFSPDFQRYQQEDAHEFLQAFLEKL----------- 276
Query: 313 YIEMKDTDGRPDEEVAYECWKNHMA-RNDSLIVDVCQGQYKSTLVCPVCGKISITFDPFM 371
E+ C + + R D DV G+ S L C C +S T++ +
Sbjct: 277 -------------EI---CGSDRTSFRGDITSQDVFSGRLISGLRCCNCDYVSETYEKSV 320
Query: 372 YLSL 375
LSL
Sbjct: 321 GLSL 324
>AT4G30890.3 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 40/208 (19%)
Query: 200 GLQNLGNTCFMNSSLQCLVHTPPLVEFFLQDYSEEI-NMDNPLGMRGELALAFGDLLRKL 258
GL N GN CF+N++LQ L+ P V+ + ++I D+P LA AF + + +L
Sbjct: 198 GLINAGNLCFLNATLQALLSCSPFVQLLQKIQLQDIPKADSPT-----LA-AFSEFISEL 251
Query: 259 ----WSSGRTAIA---------PRAFKGKLARFAP----QFSGY-NQHDSQELLAFLLDG 300
SS R + P F+G L F P SG Q D+QE L+F++D
Sbjct: 252 DVPSSSSIRNNVTVVEAGRPFRPAMFEGVLRNFTPDVLNNMSGRPRQEDAQEFLSFIMDQ 311
Query: 301 LHEDLNRVK-QKP--------YIEMKDTDGRPDEEVAYECWKNHMARNDSLI----VDVC 347
+H++L ++K Q P I + DG E V + K+ + R S + ++
Sbjct: 312 MHDELLKLKEQSPKVTASKSSVISSANDDGDEWETVGPKN-KSAVTRTQSFVPSELSEIF 370
Query: 348 QGQYKSTLVCPVCGKISITFDPFMYLSL 375
GQ KS +V K S T P++ L L
Sbjct: 371 GGQLKS-VVKAKGTKASATVQPYLLLHL 397
>AT4G30890.2 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 40/208 (19%)
Query: 200 GLQNLGNTCFMNSSLQCLVHTPPLVEFFLQDYSEEI-NMDNPLGMRGELALAFGDLLRKL 258
GL N GN CF+N++LQ L+ P V+ + ++I D+P LA AF + + +L
Sbjct: 198 GLINAGNLCFLNATLQALLSCSPFVQLLQKIQLQDIPKADSPT-----LA-AFSEFISEL 251
Query: 259 ----WSSGRTAIA---------PRAFKGKLARFAP----QFSGY-NQHDSQELLAFLLDG 300
SS R + P F+G L F P SG Q D+QE L+F++D
Sbjct: 252 DVPSSSSIRNNVTVVEAGRPFRPAMFEGVLRNFTPDVLNNMSGRPRQEDAQEFLSFIMDQ 311
Query: 301 LHEDLNRVK-QKP--------YIEMKDTDGRPDEEVAYECWKNHMARNDSLI----VDVC 347
+H++L ++K Q P I + DG E V + K+ + R S + ++
Sbjct: 312 MHDELLKLKEQSPKVTASKSSVISSANDDGDEWETVGPKN-KSAVTRTQSFVPSELSEIF 370
Query: 348 QGQYKSTLVCPVCGKISITFDPFMYLSL 375
GQ KS +V K S T P++ L L
Sbjct: 371 GGQLKS-VVKAKGTKASATVQPYLLLHL 397
>AT4G30890.1 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 40/208 (19%)
Query: 200 GLQNLGNTCFMNSSLQCLVHTPPLVEFFLQDYSEEI-NMDNPLGMRGELALAFGDLLRKL 258
GL N GN CF+N++LQ L+ P V+ + ++I D+P LA AF + + +L
Sbjct: 198 GLINAGNLCFLNATLQALLSCSPFVQLLQKIQLQDIPKADSPT-----LA-AFSEFISEL 251
Query: 259 ----WSSGRTAIA---------PRAFKGKLARFAP----QFSGY-NQHDSQELLAFLLDG 300
SS R + P F+G L F P SG Q D+QE L+F++D
Sbjct: 252 DVPSSSSIRNNVTVVEAGRPFRPAMFEGVLRNFTPDVLNNMSGRPRQEDAQEFLSFIMDQ 311
Query: 301 LHEDLNRVK-QKP--------YIEMKDTDGRPDEEVAYECWKNHMARNDSLI----VDVC 347
+H++L ++K Q P I + DG E V + K+ + R S + ++
Sbjct: 312 MHDELLKLKEQSPKVTASKSSVISSANDDGDEWETVGPKN-KSAVTRTQSFVPSELSEIF 370
Query: 348 QGQYKSTLVCPVCGKISITFDPFMYLSL 375
GQ KS +V K S T P++ L L
Sbjct: 371 GGQLKS-VVKAKGTKASATVQPYLLLHL 397
>AT2G22310.1 | Symbols: ATUBP4, UBP4 | ubiquitin-specific protease 4
| chr2:9476733-9478825 REVERSE LENGTH=365
Length = 365
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 85/206 (41%), Gaps = 14/206 (6%)
Query: 193 GERGGLAGLQNLGNTCFMNSSLQCLVHTPPLVEFFLQDYSEEINMDNPLGMRGELALAFG 252
GER G +N GNTC+ NS LQ L P E L+ Y+ +N L
Sbjct: 19 GER--YFGFENFGNTCYCNSVLQALYFCAPFREQLLEHYA-----NNKADAEENLLTCLA 71
Query: 253 DLLRKLWSSGRT--AIAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 310
DL ++ S + IAP+ F +L + F Y D+ E L +LL+ L E L + Q
Sbjct: 72 DLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNELVEILEKETQ 131
Query: 311 KPYIEMKDTDGRPDE--EVAYECWKN--HMARNDSLIVDVCQGQYKSTLVCPVCGKISIT 366
+ +T P++ V N H + + + QG + C C ++
Sbjct: 132 ATKAD-NETSSSPEKIANVLKAPLANGVHKEPIVTWVHKIFQGILTNETRCLRCETVTAR 190
Query: 367 FDPFMYLSLPLPSTVTRTMTVTIFYS 392
+ F+ LSL + + T + F S
Sbjct: 191 DETFLDLSLDIEQNSSITSCLKNFSS 216
>AT4G22350.1 | Symbols: | Ubiquitin C-terminal hydrolases
superfamily protein | chr4:11804073-11806939 REVERSE
LENGTH=510
Length = 510
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 14/118 (11%)
Query: 197 GLAGLQNLGNTCFMNSSLQCLVHTPPLVEFFL--QDYSEEINMDNPLGMRGELALAFGDL 254
G+ GL N+ T F+N ++Q L+ PL FFL ++Y + +PLG R FG+L
Sbjct: 198 GMVGLNNIQKTEFVNVTIQSLMRVTPLRNFFLIPENYQ---HCKSPLGHR------FGEL 248
Query: 255 LRKLWSSG--RTAIAPRAF-KGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 309
RK+W + + ++P F + + +F Q D E +++LL+ LH DL K
Sbjct: 249 TRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGQQSDPVEFMSWLLNTLHMDLRTSK 306
>AT4G22350.2 | Symbols: | Ubiquitin C-terminal hydrolases
superfamily protein | chr4:11804073-11806939 REVERSE
LENGTH=539
Length = 539
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 14/118 (11%)
Query: 197 GLAGLQNLGNTCFMNSSLQCLVHTPPLVEFFL--QDYSEEINMDNPLGMRGELALAFGDL 254
G+ GL N+ T F+N ++Q L+ PL FFL ++Y + +PLG R FG+L
Sbjct: 227 GMVGLNNIQKTEFVNVTIQSLMRVTPLRNFFLIPENYQ---HCKSPLGHR------FGEL 277
Query: 255 LRKLWSSG--RTAIAPRAF-KGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 309
RK+W + + ++P F + + +F Q D E +++LL+ LH DL K
Sbjct: 278 TRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGQQSDPVEFMSWLLNTLHMDLRTSK 335
>AT5G46740.1 | Symbols: UBP21 | ubiquitin-specific protease 21 |
chr5:18965410-18968492 REVERSE LENGTH=732
Length = 732
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 77/189 (40%), Gaps = 31/189 (16%)
Query: 192 RGERGGL-AGLQNLGNTCFMNSSLQCLVHTPPLVEFFLQDYSEEINMDNPLGMRGE---L 247
R E G+ AGL N GNTCF+ S LQC HT PL+ D NP E +
Sbjct: 155 RIEPTGVGAGLYNSGNTCFIASVLQCFTHTVPLI-----DSLRSFMYGNPCNCGNEKFCV 209
Query: 248 ALAFGDLLRKLWSSGRTAIAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNR 307
A D + S I F+ L F+ F +Q D+ E L LD L
Sbjct: 210 MQALRDHIELALRSSGYGINIDRFRDNLTYFSSDFMINHQEDAHEFLQSFLDKL------ 263
Query: 308 VKQKPYIEMKDTDGRPDEEVAYECWKNHMARNDSLIVD-VCQGQYKSTLVCPVCGKISIT 366
++ ++ K+ G ++ D IVD V G STL C C +S T
Sbjct: 264 --ERCCLDPKNQLGS-------------VSSQDLNIVDNVFGGGLMSTLCCCNCNSVSNT 308
Query: 367 FDPFMYLSL 375
F+P + SL
Sbjct: 309 FEPSLGWSL 317
>AT4G39910.1 | Symbols: ATUBP3, UBP3 | ubiquitin-specific protease 3
| chr4:18511858-18514139 REVERSE LENGTH=371
Length = 371
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 13/208 (6%)
Query: 193 GERGGLAGLQNLGNTCFMNSSLQCLVHTPPLVEFFLQDYSEEINMDNPLGMRGELALAFG 252
GER G +N GNTC+ NS LQ L P E L+ Y+ ++ + L
Sbjct: 19 GER--YFGFENFGNTCYCNSVLQALYFCVPFREQLLEYYTSNKSVADA---EENLMTCLA 73
Query: 253 DLLRKLWSSGRT--AIAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 310
DL ++ S + IAP+ F +L + F Y D+ E L +LL+ + + L + +
Sbjct: 74 DLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNEVVDILEKEAK 133
Query: 311 KPYIEMKDTDGRPDEEVAYEC---WKNHMARNDSLIV---DVCQGQYKSTLVCPVCGKIS 364
E + + E++A N + + ++ ++ QG + C C ++
Sbjct: 134 ATKTEHETSSSSSPEKIANGLKVPQANGVVHKEPIVTWVHNIFQGILTNETRCLRCETVT 193
Query: 365 ITFDPFMYLSLPLPSTVTRTMTVTIFYS 392
+ F+ LSL + + T + F S
Sbjct: 194 ARDETFLDLSLDIEQNSSITSCLKNFSS 221
>AT4G22285.1 | Symbols: | Ubiquitin C-terminal hydrolases
superfamily protein | chr4:11779063-11781898 REVERSE
LENGTH=541
Length = 541
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 10/116 (8%)
Query: 197 GLAGLQNLGNTCFMNSSLQCLVHTPPLVEFFLQDYSEEINMDNPLGMRGELALAFGDLLR 256
G+ GL N+ T F+N ++Q L+ PL FFL +N + L FG+L R
Sbjct: 229 GMVGLNNIQKTEFVNVTIQSLMRVTPLRNFFLIP-------ENYQHCKSPLVHRFGELTR 281
Query: 257 KLWSSG--RTAIAPRAF-KGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 309
K+W + + ++P F + + +F Q D E +++LL+ LH DL K
Sbjct: 282 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGQQSDPVEFMSWLLNTLHMDLRTSK 337
>AT1G51710.1 | Symbols: UBP6, ATUBP6 | ubiquitin-specific protease 6
| chr1:19175805-19179894 REVERSE LENGTH=482
Length = 482
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 59/119 (49%), Gaps = 15/119 (12%)
Query: 196 GGLAGLQNLGNTCFMNSSLQCLVHTPPLVEFFLQDYSEEINMDNPLGMRGELALA----F 251
G AGL NLGNTC+MNS++QCL P L + L +YS ++ L +A F
Sbjct: 101 GYSAGLVNLGNTCYMNSTVQCLKSVPEL-KSALSNYSLAARSNDVDQTSHMLTVATRELF 159
Query: 252 GDLLRKLWSSGRTAIAPRAFKGKLARFAPQFSG-----YNQHDSQELLAFLLDGLHEDL 305
G+L R + A++P F L + PQFS + Q D++E LL L + L
Sbjct: 160 GELDRSV-----NAVSPSQFWMVLRKKYPQFSQLQNGMHMQQDAEECWTQLLYTLSQSL 213
>AT1G51710.2 | Symbols: UBP6 | ubiquitin-specific protease 6 |
chr1:19175805-19179399 REVERSE LENGTH=443
Length = 443
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 59/119 (49%), Gaps = 15/119 (12%)
Query: 196 GGLAGLQNLGNTCFMNSSLQCLVHTPPLVEFFLQDYSEEINMDNPLGMRGELALA----F 251
G AGL NLGNTC+MNS++QCL P L + L +YS ++ L +A F
Sbjct: 62 GYSAGLVNLGNTCYMNSTVQCLKSVPEL-KSALSNYSLAARSNDVDQTSHMLTVATRELF 120
Query: 252 GDLLRKLWSSGRTAIAPRAFKGKLARFAPQFSG-----YNQHDSQELLAFLLDGLHEDL 305
G+L R + A++P F L + PQFS + Q D++E LL L + L
Sbjct: 121 GELDRSV-----NAVSPSQFWMVLRKKYPQFSQLQNGMHMQQDAEECWTQLLYTLSQSL 174
>AT3G21280.1 | Symbols: UBP7 | ubiquitin-specific protease 7 |
chr3:7478166-7482037 REVERSE LENGTH=532
Length = 532
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 12/117 (10%)
Query: 196 GGLAGLQNLGNTCFMNSSLQCLVHTPPLVEFFLQDY--SEEINMDNPLGMRGELALAFGD 253
G AGL NLGNTC+MNS++QCL+ P L + L +Y + ++D M L +A +
Sbjct: 156 GYSAGLVNLGNTCYMNSTMQCLISVPEL-KSELSNYQSARTKDVDQTSHM---LTVATRE 211
Query: 254 LLRKLWSSGRTAIAPRAFKGKLARFAPQFS-----GYNQHDSQELLAFLLDGLHEDL 305
L +L S + A+AP F L + PQF+ + Q D++E +L L + L
Sbjct: 212 LFSELDKSVK-AVAPMPFWMVLQKKYPQFAQLHNGNHMQQDAEECWTQMLYTLSQSL 267