Miyakogusa Predicted Gene

Lj5g3v1260880.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1260880.1 tr|I1NIH9|I1NIH9_SOYBN Ubiquitin
carboxyl-terminal hydrolase OS=Glycine max GN=Gma.30282 PE=3
SV=1,83.84,0,seg,NULL; Cysteine proteinases,NULL; UCH_2_1,Peptidase
C19, ubiquitin carboxyl-terminal hydrolase 2,,CUFF.55097.1
         (545 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G10570.1 | Symbols: UBP9 | ubiquitin-specific protease 9 | ch...   694   0.0  
AT4G10590.1 | Symbols: UBP10 | ubiquitin-specific protease 10 | ...   689   0.0  
AT4G10590.2 | Symbols: UBP10 | ubiquitin-specific protease 10 | ...   689   0.0  
AT1G32850.1 | Symbols: UBP11 | ubiquitin-specific protease 11 | ...   650   0.0  
AT2G40930.1 | Symbols: UBP5, ATUBP5, PDE323 | ubiquitin-specific...   522   e-148
AT5G22030.1 | Symbols: UBP8 | ubiquitin-specific protease 8 | ch...   431   e-121
AT5G22030.2 | Symbols: UBP8 | ubiquitin-specific protease 8 | ch...   431   e-121
AT2G32780.1 | Symbols: UBP1, ATUBP1 | ubiquitin-specific proteas...    94   2e-19
AT1G04860.1 | Symbols: UBP2, ATUBP2 | ubiquitin-specific proteas...    92   1e-18
AT3G14400.1 | Symbols: UBP25 | ubiquitin-specific protease 25 | ...    68   2e-11
AT5G10790.1 | Symbols: UBP22 | ubiquitin-specific protease 22 | ...    68   2e-11
AT5G57990.1 | Symbols: UBP23 | ubiquitin-specific protease 23 | ...    65   1e-10
AT4G17895.1 | Symbols: UBP20 | ubiquitin-specific protease 20 | ...    63   6e-10
AT4G30890.3 | Symbols: UBP24 | ubiquitin-specific protease 24 | ...    60   6e-09
AT4G30890.2 | Symbols: UBP24 | ubiquitin-specific protease 24 | ...    60   6e-09
AT4G30890.1 | Symbols: UBP24 | ubiquitin-specific protease 24 | ...    60   6e-09
AT2G22310.1 | Symbols: ATUBP4, UBP4 | ubiquitin-specific proteas...    59   1e-08
AT4G22350.1 | Symbols:  | Ubiquitin C-terminal hydrolases superf...    57   3e-08
AT4G22350.2 | Symbols:  | Ubiquitin C-terminal hydrolases superf...    57   4e-08
AT5G46740.1 | Symbols: UBP21 | ubiquitin-specific protease 21 | ...    56   6e-08
AT4G39910.1 | Symbols: ATUBP3, UBP3 | ubiquitin-specific proteas...    55   2e-07
AT4G22285.1 | Symbols:  | Ubiquitin C-terminal hydrolases superf...    54   3e-07
AT1G51710.1 | Symbols: UBP6, ATUBP6 | ubiquitin-specific proteas...    52   1e-06
AT1G51710.2 | Symbols: UBP6 | ubiquitin-specific protease 6 | ch...    52   1e-06
AT3G21280.1 | Symbols: UBP7 | ubiquitin-specific protease 7 | ch...    51   2e-06

>AT4G10570.1 | Symbols: UBP9 | ubiquitin-specific protease 9 |
           chr4:6523657-6528058 REVERSE LENGTH=923
          Length = 923

 Score =  694 bits (1791), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/540 (62%), Positives = 415/540 (76%), Gaps = 20/540 (3%)

Query: 6   KDXWERLLEWYKGGPALPRKVISQGVGQKQYSVEVYPLSLKVTDARDNSQSIVQLSKQAT 65
           K  W+RL+EWY GGP + RK+I QG   + YSVEVYPL L +TD RD S+++++L KQA+
Sbjct: 113 KQVWKRLVEWYSGGPPIERKLICQGFYTRSYSVEVYPLCLMLTDGRDESRTVIRLGKQAS 172

Query: 66  IRELYELVCKVKGLEQNKACLWDYFNLNKDSVLE-VSDQTLEDANLSMDQDIXXXXXXXX 124
           IRELYE VC + G+ Q KA +WDYF+  K+ +L+ +S ++LE+++L MDQDI        
Sbjct: 173 IRELYEKVCAMTGVPQEKAHIWDYFDKRKNGLLDPLSYKSLEESSLHMDQDILVEVDGLS 232

Query: 125 XXXXXXXXXXMGNELALVPLEPSRSSMSIAGGPTMSNGHSAGSSFNLYQGSSVSSSLTNM 184
                      GNELALVPLEPSRS ++IAGGPT+SNGHS  S+F+L+        +T+ 
Sbjct: 233 SSSQSAMSS-TGNELALVPLEPSRSIVTIAGGPTLSNGHSTTSNFSLF------PRITSE 285

Query: 185 DDKHDAY----RGERGGLAGLQNLGNTCFMNSSLQCLVHTPPLVEFFLQDYSEEINMDNP 240
           DD  D+     +GE+GGLAGL NLGNTCFMNS+LQCL HTPP+VE+FLQDYS++IN DNP
Sbjct: 286 DDGRDSLSILGKGEKGGLAGLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDINRDNP 345

Query: 241 LGMRGELALAFGDLLRKLWSSGRTAIAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDG 300
           LGM GELA+AFGDLL+KLWSSGR A+APRAFK KLARFAPQFSGYNQHDSQELLAFLLDG
Sbjct: 346 LGMCGELAIAFGDLLKKLWSSGRNAVAPRAFKTKLARFAPQFSGYNQHDSQELLAFLLDG 405

Query: 301 LHEDLNRVKQKPYIEMKDTDGRPDEEVAYECWKNHMARNDSLIVDVCQGQYKSTLVCPVC 360
           LHEDLN+VK+KPYIE+KD+D RPD+EVA E W  H ARNDS+IVDVCQGQYKSTLVCPVC
Sbjct: 406 LHEDLNKVKRKPYIELKDSDSRPDDEVAEELWNYHKARNDSVIVDVCQGQYKSTLVCPVC 465

Query: 361 GKISITFDPFMYLSLPLPSTVTRTMTVTIFYSDGSGLPMPYTVNVLKHGCCRDLCQALGI 420
           GKISITFDPFMYLS+PLPST+TR+MT+T+FY DGS LPMPYTV V K G  RDL  ALG 
Sbjct: 466 GKISITFDPFMYLSVPLPSTLTRSMTITVFYCDGSRLPMPYTVIVPKQGSIRDLITALGT 525

Query: 421 ACCLKSDEMLLLAEVYEHKIYRYLDNALESLTSIKDDEHIVAYRLKS---GARKTKIEVM 477
           ACCL  DE LLLAEVY+HKI+RY +  L+SL++IKDDEHIVAYRL     G+RK K+E++
Sbjct: 526 ACCLAEDESLLLAEVYDHKIFRYFEIPLDSLSAIKDDEHIVAYRLNQIPKGSRKAKLEIL 585

Query: 478 H-----RWMDKMKGGERKLFGTPLVTYLVENPQYGADIEESVHKLLAPLRKAYSSTKSHD 532
           H       +D ++G + KLFGTP VTY+   P  G DI+  +   L+PL K ++ +K H+
Sbjct: 586 HGGQERAVLDSVRGSDVKLFGTPFVTYVNTEPLSGTDIDAVISGFLSPLHKVHAPSKIHN 645


>AT4G10590.1 | Symbols: UBP10 | ubiquitin-specific protease 10 |
           chr4:6538919-6543272 REVERSE LENGTH=910
          Length = 910

 Score =  689 bits (1778), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/549 (61%), Positives = 422/549 (76%), Gaps = 23/549 (4%)

Query: 6   KDXWERLLEWYKGGPALPRKVISQGVGQKQYSVEVYPLSLKVTDARDNSQSIVQLSKQAT 65
           ++ W+RL+EWY GGP + RK+I QG   + YSVEVYPL L +TD RD S+++++L KQA+
Sbjct: 113 QEVWKRLVEWYSGGPPIERKLICQGFYTRSYSVEVYPLCLMLTDGRDESRTVIRLGKQAS 172

Query: 66  IRELYELVCKVKGLEQNKACLWDYFNLNKDSVLE-VSDQTLEDANLSMDQDIXXXXXXXX 124
           IRELYE VC + G+ Q KA +WDYF+  K+ +L+ +S ++LE+++L MDQDI        
Sbjct: 173 IRELYEKVCALTGVPQEKAHIWDYFDKRKNGLLDSLSYKSLEESSLHMDQDILLEVDGSS 232

Query: 125 XXXXXXXXXXMGNELALVPLEPSRSSMSIAGGPTMSNGHSAGSSFNLYQGSSVSSSLTNM 184
                      GNELALVPLEPSRSS++IAGGPT+SNGHS  S+F+L+        +T+ 
Sbjct: 233 SSQSAMSS--TGNELALVPLEPSRSSVTIAGGPTLSNGHSTTSNFSLF------PRITSE 284

Query: 185 DDKHDAY----RGERGGLAGLQNLGNTCFMNSSLQCLVHTPPLVEFFLQDYSEEINMDNP 240
           DD  ++     +GE+GGLAGL NLGNTCFMNS+LQCL HTPP+VE+FLQDYS++IN DNP
Sbjct: 285 DDGSNSLSILGKGEKGGLAGLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDINRDNP 344

Query: 241 LGMRGELALAFGDLLRKLWSSGRTAIAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDG 300
           LGM GELA+AFGDLL+KLWSSGR ++APRAFK KLARFAPQFSGYNQHDSQELLAFLLDG
Sbjct: 345 LGMCGELAIAFGDLLKKLWSSGRNSVAPRAFKTKLARFAPQFSGYNQHDSQELLAFLLDG 404

Query: 301 LHEDLNRVKQKPYIEMKDTDGRPDEEVAYECWKNHMARNDSLIVDVCQGQYKSTLVCPVC 360
           LHEDLN+VK+KPYIE+KD+D RPD+EVA E W  H ARNDS+IVDVCQGQYKSTLVCP C
Sbjct: 405 LHEDLNKVKRKPYIELKDSDSRPDDEVAEELWNYHKARNDSVIVDVCQGQYKSTLVCPAC 464

Query: 361 GKISITFDPFMYLSLPLPSTVTRTMTVTIFYSDGSGLPMPYTVNVLKHGCCRDLCQALGI 420
           GKISITFDPFMYLS+PLPST+TR+MTVT+FY DGS LPMPYTV V K+G  RDL  ALG 
Sbjct: 465 GKISITFDPFMYLSVPLPSTLTRSMTVTVFYCDGSHLPMPYTVIVPKNGSIRDLITALGT 524

Query: 421 ACCLKSDEMLLLAEVYEHKIYRYLDNALESLTSIKDDEHIVAYRLKS---GARKTKIEVM 477
           AC L  DE LLLAEVY+HKI++Y +N L+SL+SIKDDEHIVAYRL     G+ K K+E++
Sbjct: 525 ACLLAEDESLLLAEVYDHKIFKYFENPLDSLSSIKDDEHIVAYRLNQMPKGSGKAKLEIL 584

Query: 478 H-----RWMDKMKGGERKLFGTPLVTYLVENPQYGADIEESVHKLLAPLRKAYSSTKSHD 532
           H       ++ ++G + KLFGTP VTY+   P  GADI+  + + L+PL K ++ +K H+
Sbjct: 585 HGGQKRPILESVRGRDVKLFGTPFVTYVNTEPLSGADIDAVLSRFLSPLHKVHAPSKIHN 644

Query: 533 DDEKENGFI 541
               ENG +
Sbjct: 645 G--SENGHL 651


>AT4G10590.2 | Symbols: UBP10 | ubiquitin-specific protease 10 |
           chr4:6538919-6543272 REVERSE LENGTH=910
          Length = 910

 Score =  689 bits (1778), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/549 (61%), Positives = 422/549 (76%), Gaps = 23/549 (4%)

Query: 6   KDXWERLLEWYKGGPALPRKVISQGVGQKQYSVEVYPLSLKVTDARDNSQSIVQLSKQAT 65
           ++ W+RL+EWY GGP + RK+I QG   + YSVEVYPL L +TD RD S+++++L KQA+
Sbjct: 113 QEVWKRLVEWYSGGPPIERKLICQGFYTRSYSVEVYPLCLMLTDGRDESRTVIRLGKQAS 172

Query: 66  IRELYELVCKVKGLEQNKACLWDYFNLNKDSVLE-VSDQTLEDANLSMDQDIXXXXXXXX 124
           IRELYE VC + G+ Q KA +WDYF+  K+ +L+ +S ++LE+++L MDQDI        
Sbjct: 173 IRELYEKVCALTGVPQEKAHIWDYFDKRKNGLLDSLSYKSLEESSLHMDQDILLEVDGSS 232

Query: 125 XXXXXXXXXXMGNELALVPLEPSRSSMSIAGGPTMSNGHSAGSSFNLYQGSSVSSSLTNM 184
                      GNELALVPLEPSRSS++IAGGPT+SNGHS  S+F+L+        +T+ 
Sbjct: 233 SSQSAMSS--TGNELALVPLEPSRSSVTIAGGPTLSNGHSTTSNFSLF------PRITSE 284

Query: 185 DDKHDAY----RGERGGLAGLQNLGNTCFMNSSLQCLVHTPPLVEFFLQDYSEEINMDNP 240
           DD  ++     +GE+GGLAGL NLGNTCFMNS+LQCL HTPP+VE+FLQDYS++IN DNP
Sbjct: 285 DDGSNSLSILGKGEKGGLAGLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDINRDNP 344

Query: 241 LGMRGELALAFGDLLRKLWSSGRTAIAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDG 300
           LGM GELA+AFGDLL+KLWSSGR ++APRAFK KLARFAPQFSGYNQHDSQELLAFLLDG
Sbjct: 345 LGMCGELAIAFGDLLKKLWSSGRNSVAPRAFKTKLARFAPQFSGYNQHDSQELLAFLLDG 404

Query: 301 LHEDLNRVKQKPYIEMKDTDGRPDEEVAYECWKNHMARNDSLIVDVCQGQYKSTLVCPVC 360
           LHEDLN+VK+KPYIE+KD+D RPD+EVA E W  H ARNDS+IVDVCQGQYKSTLVCP C
Sbjct: 405 LHEDLNKVKRKPYIELKDSDSRPDDEVAEELWNYHKARNDSVIVDVCQGQYKSTLVCPAC 464

Query: 361 GKISITFDPFMYLSLPLPSTVTRTMTVTIFYSDGSGLPMPYTVNVLKHGCCRDLCQALGI 420
           GKISITFDPFMYLS+PLPST+TR+MTVT+FY DGS LPMPYTV V K+G  RDL  ALG 
Sbjct: 465 GKISITFDPFMYLSVPLPSTLTRSMTVTVFYCDGSHLPMPYTVIVPKNGSIRDLITALGT 524

Query: 421 ACCLKSDEMLLLAEVYEHKIYRYLDNALESLTSIKDDEHIVAYRLKS---GARKTKIEVM 477
           AC L  DE LLLAEVY+HKI++Y +N L+SL+SIKDDEHIVAYRL     G+ K K+E++
Sbjct: 525 ACLLAEDESLLLAEVYDHKIFKYFENPLDSLSSIKDDEHIVAYRLNQMPKGSGKAKLEIL 584

Query: 478 H-----RWMDKMKGGERKLFGTPLVTYLVENPQYGADIEESVHKLLAPLRKAYSSTKSHD 532
           H       ++ ++G + KLFGTP VTY+   P  GADI+  + + L+PL K ++ +K H+
Sbjct: 585 HGGQKRPILESVRGRDVKLFGTPFVTYVNTEPLSGADIDAVLSRFLSPLHKVHAPSKIHN 644

Query: 533 DDEKENGFI 541
               ENG +
Sbjct: 645 G--SENGHL 651


>AT1G32850.1 | Symbols: UBP11 | ubiquitin-specific protease 11 |
           chr1:11902629-11906900 FORWARD LENGTH=892
          Length = 892

 Score =  650 bits (1676), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/540 (60%), Positives = 396/540 (73%), Gaps = 19/540 (3%)

Query: 1   MLEEGKD-------XWERLLEWYKGGPALPRKVISQGVGQKQYSVEVYPLSLKVTDARDN 53
           MLEEG D        W +L++WYKGGP +PRK+ISQG   K +SVEVY L L +TD+RD 
Sbjct: 99  MLEEGVDYTLVQQEVWRKLVKWYKGGPPVPRKLISQGFYTKSFSVEVYLLCLTLTDSRDE 158

Query: 54  SQSIVQLSKQATIRELYELVCKVKGLEQNKACLWDYFNLNKDSVLE-VSDQTLEDANLSM 112
           S +I++LSKQA+I +LYE+VC  KG+ + KA +WDYF   K  +L+  S+Q++E+A L  
Sbjct: 159 STTIIRLSKQASIGQLYEMVCAGKGVAKEKARIWDYFEKKKSVLLDPSSEQSVEEAGLQF 218

Query: 113 DQDIXXXXXXXXXXXXXXXXXXMGNELALVPLEPSRS-SMSIA-GGPTMSNGHSAGSSFN 170
           +QDI                    NELA+VPLEP RS +M I  GG T+SNGHS G  F+
Sbjct: 219 NQDILLEVDGSASSQFVMSLAE--NELAMVPLEPMRSDAMDIVRGGGTLSNGHSNGFKFS 276

Query: 171 LYQGSSVSSSLTNMDDKHDAYRGERGGLAGLQNLGNTCFMNSSLQCLVHTPPLVEFFLQD 230
            +  ++    +++        +GE+ GL GLQNLGNTCFMNS+LQCL HTPP+VE+FLQD
Sbjct: 277 FFGRNTFKDDVSS----RTFGKGEKRGLGGLQNLGNTCFMNSTLQCLAHTPPIVEYFLQD 332

Query: 231 YSEEINMDNPLGMRGELALAFGDLLRKLWSSGRTAIAPRAFKGKLARFAPQFSGYNQHDS 290
           Y  +IN  NPLGMRGELA+AFG+LLRKLWSSG+  +APRAFK KLARFAPQFSGYNQHDS
Sbjct: 333 YRSDINAKNPLGMRGELAIAFGELLRKLWSSGQNTVAPRAFKTKLARFAPQFSGYNQHDS 392

Query: 291 QELLAFLLDGLHEDLNRVKQKPYIEMKDTDGRPDEEVAYECWKNHMARNDSLIVDVCQGQ 350
           QE+LAFLLDGLHEDLN+VK+KPYIE KD+DGRPD+EVA E WK H ARNDS+IVDV QGQ
Sbjct: 393 QEMLAFLLDGLHEDLNKVKRKPYIEAKDSDGRPDDEVAEEKWKYHKARNDSVIVDVFQGQ 452

Query: 351 YKSTLVCPVCGKISITFDPFMYLSLPLPSTVTRTMTVTIFYSDGSGLPMPYTVNVLKHGC 410
           YKSTLVCP CGKISITFDPFMYLSLPLPS+ TR+MTVT+FY DGS LPMPYTV V K G 
Sbjct: 453 YKSTLVCPDCGKISITFDPFMYLSLPLPSSRTRSMTVTVFYGDGSHLPMPYTVTVPKDGS 512

Query: 411 CRDLCQALGIACCLKSDEMLLLAEVYEHKIYRYLDNALESLTSIKDDEHIVAYRLKS--- 467
           CRDL  ALG ACCL +DE LLLAEVY+HK+++Y +N  E L  IKD+EHIVAYR K    
Sbjct: 513 CRDLSNALGTACCLDNDESLLLAEVYDHKVFKYYENPRELLNGIKDNEHIVAYRFKQMHK 572

Query: 468 GARKTKIEVMHRWMDKMKGGERKLFGTPLVTYLVENPQYGADIEESVHKLLAPLRKAYSS 527
           G  K K+E++H   +K      K FGTPLVTY+ + P  G DI  S+  LL+PLR+ + S
Sbjct: 573 GPGKVKLEILHGEQEKSSDRGPKCFGTPLVTYINKEPLSGTDIATSISGLLSPLRRVHMS 632


>AT2G40930.1 | Symbols: UBP5, ATUBP5, PDE323 | ubiquitin-specific
           protease 5 | chr2:17076714-17082192 REVERSE LENGTH=924
          Length = 924

 Score =  522 bits (1345), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 276/553 (49%), Positives = 345/553 (62%), Gaps = 25/553 (4%)

Query: 2   LEEGKD-------XWERLLEWYKGGPALPRKVISQGVGQKQYSVEVYPLSLKVTDARDNS 54
           L+EG+D        W +L  WY GGP L R+VIS G+ Q + +VEVYPL L++     + 
Sbjct: 112 LQEGRDYVLLPQEVWNQLRSWYGGGPTLARRVISSGLSQTELAVEVYPLRLQLLLMPKSD 171

Query: 55  QSIVQLSKQATIRELYELVCKVKGLEQNKACLWDYFNLNKDSVLEVSDQTLEDANLSMDQ 114
            S +++SK+ TIREL+   C++  L+     +WDY+   K S++   D+TL+DANL MDQ
Sbjct: 172 HSAIRISKKETIRELHRRACEIFDLDSEHVRIWDYYGHQKYSLMNDLDKTLDDANLQMDQ 231

Query: 115 DIXXX------XXXXXXXXXXXXXXXMGNELALVPLEPSRSSMSIAGGPTMSNGHSAGSS 168
           DI                        +  +   + +EPS+SS++ AGG + S       S
Sbjct: 232 DILVEVLDINGTLSSAHIQSAQENGLVDGDSTSILIEPSKSSLAAAGGFSSSRNAFRTGS 291

Query: 169 FNLYQGSSVSSSLTNMDDKHDAYRGERGGLAGLQNLGNTCFMNSSLQCLVHTPPLVEFFL 228
             + Q    + S T +       RG   GL GL NLGNTCFMNS++QCLVHTP    +F 
Sbjct: 292 VEVSQSFDNTYSSTGV-----TTRGSTAGLTGLLNLGNTCFMNSAIQCLVHTPEFASYFQ 346

Query: 229 QDYSEEINMDNPLGMRGELALAFGDLLRKLWSSGRTAIAPRAFKGKLARFAPQFSGYNQH 288
           +DY +EIN  NPLGM GELALAFGDLLRKLW+ GRT IAPR FK KLARFAPQFSGYNQH
Sbjct: 347 EDYHQEINWQNPLGMVGELALAFGDLLRKLWAPGRTPIAPRPFKAKLARFAPQFSGYNQH 406

Query: 289 DSQELLAFLLDGLHEDLNRVKQKPYIEMKDTDGRPDEEVAYECWKNHMARNDSLIVDVCQ 348
           DSQELLAFLLDGLHEDLNRVK KPYI  +D DGRPDEEVA E WKNH+ARNDS+IVDVCQ
Sbjct: 407 DSQELLAFLLDGLHEDLNRVKHKPYINSRDADGRPDEEVADEFWKNHIARNDSIIVDVCQ 466

Query: 349 GQYKSTLVCPVCGKISITFDPFMYLSLPLPSTVTRTMTVTIFYSDGSGLPMPYTVNVLKH 408
           GQYKSTLVCP+C K+S+TFDPFMYLSLPL    TR +TVT+F  D + LP   TVNV K 
Sbjct: 467 GQYKSTLVCPICNKVSVTFDPFMYLSLPLQFNTTRAITVTVFSCDKTALPSTITVNVSKQ 526

Query: 409 GCCRDLCQALGIACCLKSDEMLLLAEVYEHKIYRYLDNALESLTSIKDDEHIVAYRLKSG 468
           G CRDL QAL  AC LK  E L LAE+  + I+R  ++ L  L+SIKDD+H+ AY+L   
Sbjct: 527 GRCRDLIQALTNACSLKQSEELKLAEIRNNFIHRLFEDPLIPLSSIKDDDHLAAYKLSKS 586

Query: 469 ARKTKIEVMHRWMDKMKGGER------KLFGTPLVTYL-VENPQYGADIEESVHKLLAPL 521
           +  T +  +       K GER      K  GTPL++     +      I   V  +L+P 
Sbjct: 587 SENTTLLRLVLRRRDQKAGERESTVQLKPCGTPLLSSASCGDALTKGKIHCLVQNMLSPF 646

Query: 522 RKAYSSTKSHDDD 534
           R+  S  K  + D
Sbjct: 647 RREESVGKKGNSD 659


>AT5G22030.1 | Symbols: UBP8 | ubiquitin-specific protease 8 |
           chr5:7290155-7296344 REVERSE LENGTH=913
          Length = 913

 Score =  431 bits (1109), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 219/374 (58%), Positives = 269/374 (71%), Gaps = 22/374 (5%)

Query: 159 MSNGHSAGSSFNLYQGSSVSSSLTNMDDKHDAYRGERG--GLAGLQNLGNTCFMNSSLQC 216
           ++NG + G+ F   + +S+S              GE G  GL GLQNLGNTCFMNSSLQC
Sbjct: 288 ITNGMNGGTVFRFGRSNSLS---------FLGKAGEAGTLGLTGLQNLGNTCFMNSSLQC 338

Query: 217 LVHTPPLVEFFLQDYSEEINMDNPLGMRGELALAFGDLLRKLWSSGRTAIAPRAFKGKLA 276
           L HTP LV+FFL +YS+EIN+DNPLGM+GE+ALAFGDLLR LW+ G + +APR FK KLA
Sbjct: 339 LAHTPKLVDFFLGEYSKEINLDNPLGMKGEIALAFGDLLRSLWAPGASTVAPRTFKAKLA 398

Query: 277 RFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDTDGRPDEEVAYECWKNHM 336
           RFAPQFSG+NQHDSQELLAFLLDGLHEDLNRVK KPY+E KD DGRPD EVA E W+NH+
Sbjct: 399 RFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKNKPYVEAKDGDGRPDAEVADEYWRNHV 458

Query: 337 ARNDSLIVDVCQGQYKSTLVCPVCGKISITFDPFMYLSLPLPSTVTRTMTVTIFYSDGSG 396
           ARNDS+IVDVCQGQYKSTLVCP+C K+S+ FDPFMYLSLPLP T  RTM +T+  +DGS 
Sbjct: 459 ARNDSIIVDVCQGQYKSTLVCPICKKVSVMFDPFMYLSLPLPCTSMRTMDLTVMSADGSS 518

Query: 397 LPMPYTVNVLKHGCCRDLCQALGIACCLKSDEMLLLAEVYEHKIYRYLDNALESLTSIKD 456
           LP+P TVNV K G   DL +AL  AC L  +E LL+ EVY ++I R+L+   +SLT I+D
Sbjct: 519 LPIPLTVNVPKFGKFEDLHKALVTACSLPEEETLLVTEVYNNRIIRFLEEPTDSLTLIRD 578

Query: 457 DEHIVAYRLKSGARKTKIEV-MHRWMDKM-----KGGERKLFGTPLVTYL--VENPQYGA 508
            + +V YRLK  A  + + V MH+ +++           K FG PLV+ L  VEN   G+
Sbjct: 579 GDKLVVYRLKKDANNSPLIVYMHQKLEEQFISGKSSPTWKAFGIPLVSRLCDVEN---GS 635

Query: 509 DIEESVHKLLAPLR 522
           D+E    KLL+  +
Sbjct: 636 DVENLYLKLLSSFK 649


>AT5G22030.2 | Symbols: UBP8 | ubiquitin-specific protease 8 |
           chr5:7290155-7296344 REVERSE LENGTH=913
          Length = 913

 Score =  431 bits (1109), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 219/374 (58%), Positives = 269/374 (71%), Gaps = 22/374 (5%)

Query: 159 MSNGHSAGSSFNLYQGSSVSSSLTNMDDKHDAYRGERG--GLAGLQNLGNTCFMNSSLQC 216
           ++NG + G+ F   + +S+S              GE G  GL GLQNLGNTCFMNSSLQC
Sbjct: 288 ITNGMNGGTVFRFGRSNSLS---------FLGKAGEAGTLGLTGLQNLGNTCFMNSSLQC 338

Query: 217 LVHTPPLVEFFLQDYSEEINMDNPLGMRGELALAFGDLLRKLWSSGRTAIAPRAFKGKLA 276
           L HTP LV+FFL +YS+EIN+DNPLGM+GE+ALAFGDLLR LW+ G + +APR FK KLA
Sbjct: 339 LAHTPKLVDFFLGEYSKEINLDNPLGMKGEIALAFGDLLRSLWAPGASTVAPRTFKAKLA 398

Query: 277 RFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDTDGRPDEEVAYECWKNHM 336
           RFAPQFSG+NQHDSQELLAFLLDGLHEDLNRVK KPY+E KD DGRPD EVA E W+NH+
Sbjct: 399 RFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKNKPYVEAKDGDGRPDAEVADEYWRNHV 458

Query: 337 ARNDSLIVDVCQGQYKSTLVCPVCGKISITFDPFMYLSLPLPSTVTRTMTVTIFYSDGSG 396
           ARNDS+IVDVCQGQYKSTLVCP+C K+S+ FDPFMYLSLPLP T  RTM +T+  +DGS 
Sbjct: 459 ARNDSIIVDVCQGQYKSTLVCPICKKVSVMFDPFMYLSLPLPCTSMRTMDLTVMSADGSS 518

Query: 397 LPMPYTVNVLKHGCCRDLCQALGIACCLKSDEMLLLAEVYEHKIYRYLDNALESLTSIKD 456
           LP+P TVNV K G   DL +AL  AC L  +E LL+ EVY ++I R+L+   +SLT I+D
Sbjct: 519 LPIPLTVNVPKFGKFEDLHKALVTACSLPEEETLLVTEVYNNRIIRFLEEPTDSLTLIRD 578

Query: 457 DEHIVAYRLKSGARKTKIEV-MHRWMDKM-----KGGERKLFGTPLVTYL--VENPQYGA 508
            + +V YRLK  A  + + V MH+ +++           K FG PLV+ L  VEN   G+
Sbjct: 579 GDKLVVYRLKKDANNSPLIVYMHQKLEEQFISGKSSPTWKAFGIPLVSRLCDVEN---GS 635

Query: 509 DIEESVHKLLAPLR 522
           D+E    KLL+  +
Sbjct: 636 DVENLYLKLLSSFK 649


>AT2G32780.1 | Symbols: UBP1, ATUBP1 | ubiquitin-specific protease 1
           | chr2:13898431-13901870 REVERSE LENGTH=1083
          Length = 1083

 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/190 (35%), Positives = 94/190 (49%), Gaps = 28/190 (14%)

Query: 195 RGGLA--GLQNLGNTCFMNSSLQCLVHTPPLVEFFLQDYSEEINMDNPLGMRGELALAFG 252
           R G A  GL NLGNTCF NS +Q L+    L E FL++          L + G L  +  
Sbjct: 196 RDGYAVRGLVNLGNTCFFNSVMQNLLSLDQLREHFLKE---------DLSVSGPLVSSLK 246

Query: 253 DLLRKLWSSG---RTAIAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 309
           +L  +  S     R  I PR     +   APQF GY QHDS ELL  LLDGL  + + ++
Sbjct: 247 ELFAESNSEASVFRNEINPRDLFFSVCSQAPQFRGYQQHDSHELLRCLLDGLSIEESSLR 306

Query: 310 QKPYIEMKDTDGRPDEEVAYECWKNHMARNDSLIVDVCQGQYKSTLVCPVCGKISITFDP 369
           +K  + + D++             +   +  +LI  V  G+  ST+ C  CG  S  ++P
Sbjct: 307 KK--LGVSDSN------------DSSTYQKPTLIDSVFGGEISSTVSCLECGHFSKVYEP 352

Query: 370 FMYLSLPLPS 379
           FM LSLP+PS
Sbjct: 353 FMDLSLPVPS 362


>AT1G04860.1 | Symbols: UBP2, ATUBP2 | ubiquitin-specific protease 2
           | chr1:1369306-1372290 REVERSE LENGTH=961
          Length = 961

 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/184 (34%), Positives = 91/184 (49%), Gaps = 36/184 (19%)

Query: 198 LAGLQNLGNTCFMNSSLQCLVHTPPLVEFFLQDYSEEINMDNPLGMRGELALAFGDLLRK 257
           + GL NLGNTCF NS +Q L+    L + FL++        N  G+ G LA +    LRK
Sbjct: 230 VRGLVNLGNTCFFNSIMQNLLSLDRLRDHFLKE--------NGSGVGGPLASS----LRK 277

Query: 258 LWSSGR------TAIAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 311
           L++  +      + I PRAF G     APQF GY+QHDS ELL  LLD L  + + +++K
Sbjct: 278 LFTETKPEAGLKSVINPRAFFGSFCSKAPQFRGYDQHDSHELLRCLLDSLSTEESALRKK 337

Query: 312 PYIEMKDTDGRPDEEVAYECWKNHMARNDSLIVDVCQGQYKSTLVCPVCGKISITFDPFM 371
             +   D                   ++ +LI  V  G+  S + C  CG  S  ++PF+
Sbjct: 338 RGVSDND------------------EKSTTLIESVFGGETSSIVSCMECGHSSKVYEPFL 379

Query: 372 YLSL 375
            LSL
Sbjct: 380 DLSL 383


>AT3G14400.1 | Symbols: UBP25 | ubiquitin-specific protease 25 |
           chr3:4811953-4815210 REVERSE LENGTH=661
          Length = 661

 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 84/195 (43%), Gaps = 22/195 (11%)

Query: 200 GLQNLGNTCFMNSSLQCLVHTPPLVEFFL-QDYSEEIN--MDNPLGMRGELALAFGDLLR 256
           GL+NLGNTC++NS LQCL  TPPL  F L   +S   +  +D          +    + R
Sbjct: 25  GLRNLGNTCYLNSVLQCLTFTPPLANFCLTHKHSSHCDTYVDGERKRDCPFCIVEKRIAR 84

Query: 257 KLWSSGRTAIAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEM 316
            L S   T  AP      L  FA  F    Q D+ E L +++D  H    R+K+  Y   
Sbjct: 85  SL-SVDLTTDAPNKISSCLKIFAEHFKLGRQEDAHEFLRYVIDACHNTSLRLKKLRYNGN 143

Query: 317 KDTDGRPDEEVAYECWKNHMARNDSLIVDVCQGQYKSTLVCPVCGKISITFDPFMYLSLP 376
           +  +G                  +S++ ++  G  +S + C  CG  S   D  M +SL 
Sbjct: 144 EPFNG------------------NSVVKEIFGGALQSQVKCLSCGAESNKADEIMDISLE 185

Query: 377 LPSTVTRTMTVTIFY 391
           +  + +   ++  F+
Sbjct: 186 ILQSSSVKESLQKFF 200


>AT5G10790.1 | Symbols: UBP22 | ubiquitin-specific protease 22 |
           chr5:3410638-3412559 FORWARD LENGTH=557
          Length = 557

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 58/116 (50%), Gaps = 6/116 (5%)

Query: 197 GLAGLQNLGNTCFMNSSLQCLVHTPPLVEFFLQDYSEEINMD-NPLGMRGELALA--FGD 253
           GL GL NLG+TCFMN+ LQ LVH PPL  F+L   S + N D  P    G L L      
Sbjct: 175 GLRGLNNLGSTCFMNAVLQALVHAPPLRNFWL---SGQHNRDLCPRRTMGLLCLPCDLDV 231

Query: 254 LLRKLWSSGRTAIAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 309
           +   ++S  RT  +P        + +   + Y Q DS E    LLD +HE+  + K
Sbjct: 232 IFSAMFSGDRTPYSPAHLLYSWWQHSTNLATYEQQDSHEFFISLLDRIHENEGKSK 287


>AT5G57990.1 | Symbols: UBP23 | ubiquitin-specific protease 23 |
           chr5:23470218-23473997 REVERSE LENGTH=859
          Length = 859

 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 77/180 (42%), Gaps = 26/180 (14%)

Query: 199 AGLQNLGNTCFMNSSLQCLVHTPPLVEFFLQDYSEEINMDNPLGMRGELAL-AFGDLLRK 257
           AGLQNLGNTCF+NS LQCL +T PL    LQ  + +        + G  AL A    +R 
Sbjct: 107 AGLQNLGNTCFLNSVLQCLTYTEPLAA-TLQTAAHQ----KYCHVAGFCALCAIQKHVRT 161

Query: 258 LWSSGRTAIAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMK 317
              +    +AP+     L   +  F    Q D+ E +  LL+ +H            +  
Sbjct: 162 ARQANGRILAPKDLVSNLRCISRNFRNCRQEDAHEYMINLLECMH------------KCS 209

Query: 318 DTDGRPDEEVAYECWKNHMARNDSLIVDVCQGQYKSTLVCPVCGKISITFDPFMYLSLPL 377
              G P E        +  A   SL+  +  G  +S + C  C   S  FDPF+ LSL +
Sbjct: 210 LPSGVPSE--------SSDAYRRSLVHKIFGGSLRSQVKCEQCSHCSNKFDPFLDLSLDI 261


>AT4G17895.1 | Symbols: UBP20 | ubiquitin-specific protease 20 |
           chr4:9939914-9942698 FORWARD LENGTH=695
          Length = 695

 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 73/184 (39%), Gaps = 36/184 (19%)

Query: 196 GGLAGLQNLGNTCFMNSSLQCLVHTPPLVEFFLQDYSEEINMDNPLGMRGELALAFGDLL 255
           G  AGL NLGN+CF+NS  QC  HT PL+E  L         + P     E       + 
Sbjct: 173 GVGAGLWNLGNSCFLNSVFQCFTHTVPLIESLLS-----FRYEVPCHCGNEFFCVIRAIR 227

Query: 256 RKLWSS---GRTAIAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKP 312
             + ++    R  IAP  F   L  F+P F  Y Q D+ E L   L+ L           
Sbjct: 228 YHIEAALRPERCPIAPYFFFDNLNYFSPDFQRYQQEDAHEFLQAFLEKL----------- 276

Query: 313 YIEMKDTDGRPDEEVAYECWKNHMA-RNDSLIVDVCQGQYKSTLVCPVCGKISITFDPFM 371
                        E+   C  +  + R D    DV  G+  S L C  C  +S T++  +
Sbjct: 277 -------------EI---CGSDRTSFRGDITSQDVFSGRLISGLRCCNCDYVSETYEKSV 320

Query: 372 YLSL 375
            LSL
Sbjct: 321 GLSL 324


>AT4G30890.3 | Symbols: UBP24 | ubiquitin-specific protease 24 |
           chr4:15036383-15038825 REVERSE LENGTH=551
          Length = 551

 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 40/208 (19%)

Query: 200 GLQNLGNTCFMNSSLQCLVHTPPLVEFFLQDYSEEI-NMDNPLGMRGELALAFGDLLRKL 258
           GL N GN CF+N++LQ L+   P V+   +   ++I   D+P      LA AF + + +L
Sbjct: 198 GLINAGNLCFLNATLQALLSCSPFVQLLQKIQLQDIPKADSPT-----LA-AFSEFISEL 251

Query: 259 ----WSSGRTAIA---------PRAFKGKLARFAP----QFSGY-NQHDSQELLAFLLDG 300
                SS R  +          P  F+G L  F P      SG   Q D+QE L+F++D 
Sbjct: 252 DVPSSSSIRNNVTVVEAGRPFRPAMFEGVLRNFTPDVLNNMSGRPRQEDAQEFLSFIMDQ 311

Query: 301 LHEDLNRVK-QKP--------YIEMKDTDGRPDEEVAYECWKNHMARNDSLI----VDVC 347
           +H++L ++K Q P         I   + DG   E V  +  K+ + R  S +     ++ 
Sbjct: 312 MHDELLKLKEQSPKVTASKSSVISSANDDGDEWETVGPKN-KSAVTRTQSFVPSELSEIF 370

Query: 348 QGQYKSTLVCPVCGKISITFDPFMYLSL 375
            GQ KS +V     K S T  P++ L L
Sbjct: 371 GGQLKS-VVKAKGTKASATVQPYLLLHL 397


>AT4G30890.2 | Symbols: UBP24 | ubiquitin-specific protease 24 |
           chr4:15036383-15038825 REVERSE LENGTH=551
          Length = 551

 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 40/208 (19%)

Query: 200 GLQNLGNTCFMNSSLQCLVHTPPLVEFFLQDYSEEI-NMDNPLGMRGELALAFGDLLRKL 258
           GL N GN CF+N++LQ L+   P V+   +   ++I   D+P      LA AF + + +L
Sbjct: 198 GLINAGNLCFLNATLQALLSCSPFVQLLQKIQLQDIPKADSPT-----LA-AFSEFISEL 251

Query: 259 ----WSSGRTAIA---------PRAFKGKLARFAP----QFSGY-NQHDSQELLAFLLDG 300
                SS R  +          P  F+G L  F P      SG   Q D+QE L+F++D 
Sbjct: 252 DVPSSSSIRNNVTVVEAGRPFRPAMFEGVLRNFTPDVLNNMSGRPRQEDAQEFLSFIMDQ 311

Query: 301 LHEDLNRVK-QKP--------YIEMKDTDGRPDEEVAYECWKNHMARNDSLI----VDVC 347
           +H++L ++K Q P         I   + DG   E V  +  K+ + R  S +     ++ 
Sbjct: 312 MHDELLKLKEQSPKVTASKSSVISSANDDGDEWETVGPKN-KSAVTRTQSFVPSELSEIF 370

Query: 348 QGQYKSTLVCPVCGKISITFDPFMYLSL 375
            GQ KS +V     K S T  P++ L L
Sbjct: 371 GGQLKS-VVKAKGTKASATVQPYLLLHL 397


>AT4G30890.1 | Symbols: UBP24 | ubiquitin-specific protease 24 |
           chr4:15036383-15038825 REVERSE LENGTH=551
          Length = 551

 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 40/208 (19%)

Query: 200 GLQNLGNTCFMNSSLQCLVHTPPLVEFFLQDYSEEI-NMDNPLGMRGELALAFGDLLRKL 258
           GL N GN CF+N++LQ L+   P V+   +   ++I   D+P      LA AF + + +L
Sbjct: 198 GLINAGNLCFLNATLQALLSCSPFVQLLQKIQLQDIPKADSPT-----LA-AFSEFISEL 251

Query: 259 ----WSSGRTAIA---------PRAFKGKLARFAP----QFSGY-NQHDSQELLAFLLDG 300
                SS R  +          P  F+G L  F P      SG   Q D+QE L+F++D 
Sbjct: 252 DVPSSSSIRNNVTVVEAGRPFRPAMFEGVLRNFTPDVLNNMSGRPRQEDAQEFLSFIMDQ 311

Query: 301 LHEDLNRVK-QKP--------YIEMKDTDGRPDEEVAYECWKNHMARNDSLI----VDVC 347
           +H++L ++K Q P         I   + DG   E V  +  K+ + R  S +     ++ 
Sbjct: 312 MHDELLKLKEQSPKVTASKSSVISSANDDGDEWETVGPKN-KSAVTRTQSFVPSELSEIF 370

Query: 348 QGQYKSTLVCPVCGKISITFDPFMYLSL 375
            GQ KS +V     K S T  P++ L L
Sbjct: 371 GGQLKS-VVKAKGTKASATVQPYLLLHL 397


>AT2G22310.1 | Symbols: ATUBP4, UBP4 | ubiquitin-specific protease 4
           | chr2:9476733-9478825 REVERSE LENGTH=365
          Length = 365

 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 85/206 (41%), Gaps = 14/206 (6%)

Query: 193 GERGGLAGLQNLGNTCFMNSSLQCLVHTPPLVEFFLQDYSEEINMDNPLGMRGELALAFG 252
           GER    G +N GNTC+ NS LQ L    P  E  L+ Y+     +N       L     
Sbjct: 19  GER--YFGFENFGNTCYCNSVLQALYFCAPFREQLLEHYA-----NNKADAEENLLTCLA 71

Query: 253 DLLRKLWSSGRT--AIAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 310
           DL  ++ S  +    IAP+ F  +L +    F  Y   D+ E L +LL+ L E L +  Q
Sbjct: 72  DLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNELVEILEKETQ 131

Query: 311 KPYIEMKDTDGRPDE--EVAYECWKN--HMARNDSLIVDVCQGQYKSTLVCPVCGKISIT 366
               +  +T   P++   V      N  H     + +  + QG   +   C  C  ++  
Sbjct: 132 ATKAD-NETSSSPEKIANVLKAPLANGVHKEPIVTWVHKIFQGILTNETRCLRCETVTAR 190

Query: 367 FDPFMYLSLPLPSTVTRTMTVTIFYS 392
            + F+ LSL +    + T  +  F S
Sbjct: 191 DETFLDLSLDIEQNSSITSCLKNFSS 216


>AT4G22350.1 | Symbols:  | Ubiquitin C-terminal hydrolases
           superfamily protein | chr4:11804073-11806939 REVERSE
           LENGTH=510
          Length = 510

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 14/118 (11%)

Query: 197 GLAGLQNLGNTCFMNSSLQCLVHTPPLVEFFL--QDYSEEINMDNPLGMRGELALAFGDL 254
           G+ GL N+  T F+N ++Q L+   PL  FFL  ++Y    +  +PLG R      FG+L
Sbjct: 198 GMVGLNNIQKTEFVNVTIQSLMRVTPLRNFFLIPENYQ---HCKSPLGHR------FGEL 248

Query: 255 LRKLWSSG--RTAIAPRAF-KGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 309
            RK+W +   +  ++P  F +  +     +F    Q D  E +++LL+ LH DL   K
Sbjct: 249 TRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGQQSDPVEFMSWLLNTLHMDLRTSK 306


>AT4G22350.2 | Symbols:  | Ubiquitin C-terminal hydrolases
           superfamily protein | chr4:11804073-11806939 REVERSE
           LENGTH=539
          Length = 539

 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 14/118 (11%)

Query: 197 GLAGLQNLGNTCFMNSSLQCLVHTPPLVEFFL--QDYSEEINMDNPLGMRGELALAFGDL 254
           G+ GL N+  T F+N ++Q L+   PL  FFL  ++Y    +  +PLG R      FG+L
Sbjct: 227 GMVGLNNIQKTEFVNVTIQSLMRVTPLRNFFLIPENYQ---HCKSPLGHR------FGEL 277

Query: 255 LRKLWSSG--RTAIAPRAF-KGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 309
            RK+W +   +  ++P  F +  +     +F    Q D  E +++LL+ LH DL   K
Sbjct: 278 TRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGQQSDPVEFMSWLLNTLHMDLRTSK 335


>AT5G46740.1 | Symbols: UBP21 | ubiquitin-specific protease 21 |
           chr5:18965410-18968492 REVERSE LENGTH=732
          Length = 732

 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 77/189 (40%), Gaps = 31/189 (16%)

Query: 192 RGERGGL-AGLQNLGNTCFMNSSLQCLVHTPPLVEFFLQDYSEEINMDNPLGMRGE---L 247
           R E  G+ AGL N GNTCF+ S LQC  HT PL+     D        NP     E   +
Sbjct: 155 RIEPTGVGAGLYNSGNTCFIASVLQCFTHTVPLI-----DSLRSFMYGNPCNCGNEKFCV 209

Query: 248 ALAFGDLLRKLWSSGRTAIAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNR 307
             A  D +     S    I    F+  L  F+  F   +Q D+ E L   LD L      
Sbjct: 210 MQALRDHIELALRSSGYGINIDRFRDNLTYFSSDFMINHQEDAHEFLQSFLDKL------ 263

Query: 308 VKQKPYIEMKDTDGRPDEEVAYECWKNHMARNDSLIVD-VCQGQYKSTLVCPVCGKISIT 366
             ++  ++ K+  G              ++  D  IVD V  G   STL C  C  +S T
Sbjct: 264 --ERCCLDPKNQLGS-------------VSSQDLNIVDNVFGGGLMSTLCCCNCNSVSNT 308

Query: 367 FDPFMYLSL 375
           F+P +  SL
Sbjct: 309 FEPSLGWSL 317


>AT4G39910.1 | Symbols: ATUBP3, UBP3 | ubiquitin-specific protease 3
           | chr4:18511858-18514139 REVERSE LENGTH=371
          Length = 371

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 13/208 (6%)

Query: 193 GERGGLAGLQNLGNTCFMNSSLQCLVHTPPLVEFFLQDYSEEINMDNPLGMRGELALAFG 252
           GER    G +N GNTC+ NS LQ L    P  E  L+ Y+   ++ +       L     
Sbjct: 19  GER--YFGFENFGNTCYCNSVLQALYFCVPFREQLLEYYTSNKSVADA---EENLMTCLA 73

Query: 253 DLLRKLWSSGRT--AIAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 310
           DL  ++ S  +    IAP+ F  +L +    F  Y   D+ E L +LL+ + + L +  +
Sbjct: 74  DLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNEVVDILEKEAK 133

Query: 311 KPYIEMKDTDGRPDEEVAYEC---WKNHMARNDSLIV---DVCQGQYKSTLVCPVCGKIS 364
               E + +     E++A        N +   + ++    ++ QG   +   C  C  ++
Sbjct: 134 ATKTEHETSSSSSPEKIANGLKVPQANGVVHKEPIVTWVHNIFQGILTNETRCLRCETVT 193

Query: 365 ITFDPFMYLSLPLPSTVTRTMTVTIFYS 392
              + F+ LSL +    + T  +  F S
Sbjct: 194 ARDETFLDLSLDIEQNSSITSCLKNFSS 221


>AT4G22285.1 | Symbols:  | Ubiquitin C-terminal hydrolases
           superfamily protein | chr4:11779063-11781898 REVERSE
           LENGTH=541
          Length = 541

 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 10/116 (8%)

Query: 197 GLAGLQNLGNTCFMNSSLQCLVHTPPLVEFFLQDYSEEINMDNPLGMRGELALAFGDLLR 256
           G+ GL N+  T F+N ++Q L+   PL  FFL         +N    +  L   FG+L R
Sbjct: 229 GMVGLNNIQKTEFVNVTIQSLMRVTPLRNFFLIP-------ENYQHCKSPLVHRFGELTR 281

Query: 257 KLWSSG--RTAIAPRAF-KGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 309
           K+W +   +  ++P  F +  +     +F    Q D  E +++LL+ LH DL   K
Sbjct: 282 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGQQSDPVEFMSWLLNTLHMDLRTSK 337


>AT1G51710.1 | Symbols: UBP6, ATUBP6 | ubiquitin-specific protease 6
           | chr1:19175805-19179894 REVERSE LENGTH=482
          Length = 482

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 59/119 (49%), Gaps = 15/119 (12%)

Query: 196 GGLAGLQNLGNTCFMNSSLQCLVHTPPLVEFFLQDYSEEINMDNPLGMRGELALA----F 251
           G  AGL NLGNTC+MNS++QCL   P L +  L +YS     ++       L +A    F
Sbjct: 101 GYSAGLVNLGNTCYMNSTVQCLKSVPEL-KSALSNYSLAARSNDVDQTSHMLTVATRELF 159

Query: 252 GDLLRKLWSSGRTAIAPRAFKGKLARFAPQFSG-----YNQHDSQELLAFLLDGLHEDL 305
           G+L R +      A++P  F   L +  PQFS      + Q D++E    LL  L + L
Sbjct: 160 GELDRSV-----NAVSPSQFWMVLRKKYPQFSQLQNGMHMQQDAEECWTQLLYTLSQSL 213


>AT1G51710.2 | Symbols: UBP6 | ubiquitin-specific protease 6 |
           chr1:19175805-19179399 REVERSE LENGTH=443
          Length = 443

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 59/119 (49%), Gaps = 15/119 (12%)

Query: 196 GGLAGLQNLGNTCFMNSSLQCLVHTPPLVEFFLQDYSEEINMDNPLGMRGELALA----F 251
           G  AGL NLGNTC+MNS++QCL   P L +  L +YS     ++       L +A    F
Sbjct: 62  GYSAGLVNLGNTCYMNSTVQCLKSVPEL-KSALSNYSLAARSNDVDQTSHMLTVATRELF 120

Query: 252 GDLLRKLWSSGRTAIAPRAFKGKLARFAPQFSG-----YNQHDSQELLAFLLDGLHEDL 305
           G+L R +      A++P  F   L +  PQFS      + Q D++E    LL  L + L
Sbjct: 121 GELDRSV-----NAVSPSQFWMVLRKKYPQFSQLQNGMHMQQDAEECWTQLLYTLSQSL 174


>AT3G21280.1 | Symbols: UBP7 | ubiquitin-specific protease 7 |
           chr3:7478166-7482037 REVERSE LENGTH=532
          Length = 532

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 12/117 (10%)

Query: 196 GGLAGLQNLGNTCFMNSSLQCLVHTPPLVEFFLQDY--SEEINMDNPLGMRGELALAFGD 253
           G  AGL NLGNTC+MNS++QCL+  P L +  L +Y  +   ++D    M   L +A  +
Sbjct: 156 GYSAGLVNLGNTCYMNSTMQCLISVPEL-KSELSNYQSARTKDVDQTSHM---LTVATRE 211

Query: 254 LLRKLWSSGRTAIAPRAFKGKLARFAPQFS-----GYNQHDSQELLAFLLDGLHEDL 305
           L  +L  S + A+AP  F   L +  PQF+      + Q D++E    +L  L + L
Sbjct: 212 LFSELDKSVK-AVAPMPFWMVLQKKYPQFAQLHNGNHMQQDAEECWTQMLYTLSQSL 267