Miyakogusa Predicted Gene

Lj5g3v1249850.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1249850.1 tr|I1YT05|I1YT05_PREIN SIR2-like domain protein
OS=Prevotella intermedia 17 GN=PIN17_A0169 PE=4 SV=1,29.58,5e-18,no
description,Protein prenyltransferase; TOM20_plant,Plant specific
mitochondrial import receptor s,CUFF.55096.1
         (517 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G41950.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   671   0.0  

>AT5G41950.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr5:16785825-16789360 FORWARD
           LENGTH=565
          Length = 565

 Score =  671 bits (1731), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/436 (75%), Positives = 376/436 (86%), Gaps = 14/436 (3%)

Query: 89  RKDEGSRTFTMRELLHGLKNDSEPEREDGN-----SPYSQESQQQQRNDENNAAMDLINS 143
           + D+G++TFTMRELL  LK+    E  DG      SP+S+ES  Q    ENN AMDLIN 
Sbjct: 137 KDDDGNKTFTMRELLSELKS----EEGDGTPHSSASPFSRESASQPA--ENNPAMDLINR 190

Query: 144 VVGVDEEGRSRQRILTFAARRYATAIERNPEDYDALYNWALVLQESADNVSPDSTSPSKD 203
           +   DEEGRSRQR+L FAAR+YA+AIERNP+D+DALYNWAL+LQESADNVSPDS SPSKD
Sbjct: 191 IQVNDEEGRSRQRVLAFAARKYASAIERNPDDHDALYNWALILQESADNVSPDSVSPSKD 250

Query: 204 ALLEEACRKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATENYVKAVQ 263
            LLEEAC+KYDEATRLCPTL+DA+YNWAIAISDRAK+RGRTKEAEELW+QA +NY KAVQ
Sbjct: 251 DLLEEACKKYDEATRLCPTLYDAYYNWAIAISDRAKIRGRTKEAEELWEQAADNYEKAVQ 310

Query: 264 LNWNSPQALNNWGLALQELSAIVPAREKQKIVRTAISKFRAAIQLQFDFHRAIYNLGTVL 323
           LNWNS QALNNWGL LQELS IVPAREK+K+VRTAISKFRAAI+LQFDFHRAIYNLGTVL
Sbjct: 311 LNWNSSQALNNWGLVLQELSQIVPAREKEKVVRTAISKFRAAIRLQFDFHRAIYNLGTVL 370

Query: 324 YGLAEDTLRTGGSINSQELSPNELYSQSAIYIAAAHALKPNYSVYSSALRLVRSMLPLPH 383
           YGLAEDTLRTGGS N +++ P ELYSQSAIYIAAAH+LKP+YSVYSSALRLVRSMLPLPH
Sbjct: 371 YGLAEDTLRTGGSGNGKDMPPGELYSQSAIYIAAAHSLKPSYSVYSSALRLVRSMLPLPH 430

Query: 384 LKVGYLTAPPPGATIAPHNDWKRSEFFLDHEKLQQIPKGEHRPLPQSLSSRPVDSMSG-- 441
           LKVGYLTAPP G ++APH+DWKR+EF L+HE+L Q+ K E R + ++LS +  ++MS   
Sbjct: 431 LKVGYLTAPPVGNSLAPHSDWKRTEFELNHERLLQVLKPEPREMGRNLSGK-AETMSTNV 489

Query: 442 DKKNIKVDIADIVSVSACADLTLPPGAGLCIDTTHGSVFLVADSWESLDGWLDAIRLVYT 501
           ++K +KV+I +IVSV+ CADLTLPPGAGLCIDT HG VFLVADSWESLDGWLDAIRLVYT
Sbjct: 490 ERKTVKVNITEIVSVTPCADLTLPPGAGLCIDTIHGPVFLVADSWESLDGWLDAIRLVYT 549

Query: 502 IYVRGKSDVLAGIIAG 517
           IY RGKSDVLAGII G
Sbjct: 550 IYARGKSDVLAGIITG 565