Miyakogusa Predicted Gene
- Lj5g3v1225680.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1225680.1 tr|Q1SMZ4|Q1SMZ4_MEDTR Tetratricopeptide-like
helical OS=Medicago truncatula
GN=MtrDRAFT_AC139526g33,26.57,5e-19,PPR_2,Pentatricopeptide repeat;
PPR_1,Pentatricopeptide repeat; PPR,Pentatricopeptide repeat; no
des,CUFF.55067.1
(244 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 1e-49
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 1e-47
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 3e-47
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 184 7e-47
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 8e-46
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 9e-46
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 1e-45
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 179 2e-45
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 179 2e-45
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 177 7e-45
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 1e-44
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 1e-44
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 174 3e-44
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 174 5e-44
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 6e-44
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 7e-44
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 173 1e-43
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 173 1e-43
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 6e-43
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 1e-42
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 2e-42
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 168 2e-42
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 168 3e-42
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 3e-42
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 1e-41
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 2e-41
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 165 3e-41
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 164 4e-41
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 8e-41
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 163 1e-40
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 3e-40
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 161 4e-40
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 6e-40
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 6e-40
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 7e-40
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 2e-39
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 158 3e-39
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 4e-39
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 155 2e-38
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 155 2e-38
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 155 3e-38
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 5e-38
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 8e-38
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 152 1e-37
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 3e-37
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 3e-37
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 151 3e-37
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 5e-37
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 9e-37
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 1e-36
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 149 1e-36
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 149 2e-36
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 3e-36
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 4e-36
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 4e-36
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 5e-36
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 9e-36
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 9e-36
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 1e-35
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 1e-35
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 146 2e-35
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 2e-35
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 2e-35
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 3e-35
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 4e-35
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 1e-34
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 1e-34
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 142 2e-34
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 3e-34
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 4e-34
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 141 5e-34
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 5e-34
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 5e-34
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 6e-34
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 140 8e-34
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 9e-34
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 1e-33
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 1e-33
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 138 3e-33
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 4e-33
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 137 8e-33
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 1e-32
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 3e-32
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 134 6e-32
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 6e-32
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 1e-31
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 133 1e-31
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 132 2e-31
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 132 2e-31
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 131 4e-31
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 130 6e-31
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 1e-30
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 2e-30
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 2e-30
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 3e-30
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 4e-30
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 6e-30
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 7e-30
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 9e-30
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 1e-29
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 2e-29
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 4e-29
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 4e-29
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 8e-29
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 8e-29
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 3e-28
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 3e-28
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 5e-28
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 5e-28
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 6e-28
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 120 6e-28
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 8e-28
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 8e-28
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 1e-27
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 1e-27
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 1e-27
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 3e-27
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 119 3e-27
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 3e-27
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 3e-27
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 4e-27
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 7e-27
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 7e-27
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 1e-26
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 1e-26
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 115 3e-26
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 3e-26
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 3e-26
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 4e-26
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 4e-26
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 5e-26
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 5e-26
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 114 6e-26
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 9e-26
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 9e-26
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 9e-26
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 9e-26
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 1e-25
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 112 2e-25
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 2e-25
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 3e-25
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 4e-25
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 4e-25
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 6e-25
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 109 1e-24
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 2e-24
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 2e-24
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 2e-24
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 3e-24
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 3e-24
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 3e-24
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 3e-24
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 5e-24
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 1e-23
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 1e-23
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 1e-23
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 105 2e-23
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 105 2e-23
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 2e-23
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 2e-23
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 2e-23
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 104 4e-23
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 6e-23
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 9e-23
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 1e-22
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 101 4e-22
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 4e-22
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 5e-22
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 1e-21
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 100 1e-21
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 2e-21
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 2e-21
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 4e-21
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 4e-21
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 98 4e-21
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 5e-21
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 1e-20
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 1e-20
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 1e-20
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 1e-20
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 2e-20
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 2e-20
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 96 2e-20
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 94 6e-20
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 94 6e-20
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 1e-19
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 93 1e-19
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-19
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 3e-19
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 3e-19
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 3e-19
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 91 8e-19
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 1e-18
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 1e-18
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 1e-18
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 1e-18
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 89 2e-18
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 2e-18
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 2e-18
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 2e-18
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 2e-18
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 89 3e-18
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 89 3e-18
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 4e-18
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 88 6e-18
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 8e-18
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 9e-18
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 87 9e-18
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 1e-17
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 86 3e-17
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 4e-17
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 6e-17
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 6e-17
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 1e-16
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 1e-16
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 1e-16
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 1e-16
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 2e-16
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-16
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-16
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 3e-16
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 3e-16
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 3e-16
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 4e-16
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 82 4e-16
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 4e-16
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 4e-16
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 5e-16
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 6e-16
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 1e-15
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 1e-15
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 2e-15
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 2e-15
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 79 3e-15
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 4e-15
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 4e-15
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 4e-15
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 6e-15
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 77 7e-15
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 7e-15
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 7e-15
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 77 1e-14
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 76 2e-14
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 76 2e-14
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 76 2e-14
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 2e-14
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 2e-14
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 4e-14
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 5e-14
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 5e-14
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 75 5e-14
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 7e-14
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 9e-14
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 9e-14
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 74 1e-13
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 2e-13
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 2e-13
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 73 2e-13
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 72 4e-13
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 5e-13
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 71 5e-13
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 6e-13
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 6e-13
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 6e-13
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 7e-13
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 8e-13
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 8e-13
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 9e-13
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 70 1e-12
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 70 1e-12
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 1e-12
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 1e-12
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 1e-12
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 1e-12
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 2e-12
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-12
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 69 2e-12
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-12
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 3e-12
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 3e-12
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 3e-12
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 3e-12
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 3e-12
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 3e-12
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 3e-12
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 3e-12
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 4e-12
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 4e-12
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 4e-12
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 6e-12
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 6e-12
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 6e-12
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 7e-12
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 8e-12
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 8e-12
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 9e-12
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 9e-12
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 9e-12
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 67 1e-11
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 67 1e-11
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 67 1e-11
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 2e-11
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 2e-11
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 2e-11
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 2e-11
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 3e-11
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 65 3e-11
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 65 3e-11
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 3e-11
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 3e-11
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 4e-11
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 4e-11
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 4e-11
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 4e-11
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 65 4e-11
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 65 4e-11
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 5e-11
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 5e-11
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 5e-11
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 5e-11
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 5e-11
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 5e-11
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 6e-11
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 65 6e-11
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 64 7e-11
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 7e-11
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 7e-11
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 9e-11
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 64 1e-10
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 64 1e-10
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 64 1e-10
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 2e-10
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 2e-10
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 3e-10
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 4e-10
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 4e-10
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 4e-10
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 5e-10
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 6e-10
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 7e-10
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 7e-10
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 8e-10
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 8e-10
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 8e-10
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 8e-10
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 8e-10
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 9e-10
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 60 1e-09
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 60 2e-09
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-09
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-09
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 59 2e-09
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 59 2e-09
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT3G60960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 5e-09
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 58 5e-09
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 58 5e-09
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 58 5e-09
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 6e-09
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 6e-09
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 7e-09
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 7e-09
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 7e-09
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 57 8e-09
AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 8e-09
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 9e-09
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 9e-09
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 9e-09
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 57 1e-08
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 2e-08
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 2e-08
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 2e-08
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 2e-08
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 3e-08
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 3e-08
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 55 4e-08
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 5e-08
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 7e-08
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 7e-08
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 7e-08
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 8e-08
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 9e-08
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 9e-08
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 54 1e-07
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 2e-07
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 4e-07
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 5e-07
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 8e-07
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 50 1e-06
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT5G14350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 6e-06
AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 9e-06
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 192 bits (489), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 143/229 (62%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ +G+ P+ +TYNSL+DG+C N +++A +F+ M G PD+++YSI+IN CK K
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V++ + L +++ S+ +IPNTITYN+L+ G C++GK++ A EL EM RG P ++TY
Sbjct: 401 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 460
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
LD LC ++K + + +K+ + + YNI++ G+C ++ DA +F L KG
Sbjct: 461 LLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG 520
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
+ TYN MI GLCK+G EA L KM+++GC D T+ +I A
Sbjct: 521 VKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 569
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 135/239 (56%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M ++ +K +VV Y+ ++D C + A ++FN M G+ DV++YS +I GLC
Sbjct: 236 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 295
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++ +L++M IIP+ +T+++LID K GK+ A EL +EM RG D ITYNS
Sbjct: 296 WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNS 355
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D CK + + + + ++ KG +PD+ TY+IL++ CK R+ D +F+++ KG
Sbjct: 356 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 415
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
N TYNT++ G C+ G + A L +M G +T+ ++ L + GE +KA
Sbjct: 416 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKA 474
Score = 154 bits (388), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 136/230 (59%), Gaps = 2/230 (0%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
V MKQ +P++VT ++L++G CL V++A + + M + G PD ++Y ++N LCK
Sbjct: 167 VEMKQ--RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSG 224
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
AL+L ++M I + + Y+ +ID LCK G +A L +EM ++G AD++TY+
Sbjct: 225 NSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYS 284
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
S + LC D G +++++I + I PD+ T++ L+D K G++ +A+E++ ++ +
Sbjct: 285 SLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR 344
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
G + TYN++I+G CKE EA + M GC D +T+ +I++
Sbjct: 345 GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394
Score = 150 bits (380), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 137/244 (56%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
ML M+ + + P+VVT+++L+D + ++ +A+ ++N M G+ PD ++Y+ +I+G C
Sbjct: 302 MLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFC 361
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K ++EA + M S+ P+ +TY+ LI+ CK +V + L E+ +G + I
Sbjct: 362 KENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTI 421
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN+ + C+ ++ L ++++ +G+ P + TY ILLDGLC G + A E+F+ +
Sbjct: 422 TYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
K L YN +I+G+C D+A +L + D G D +T+ +I L +KG
Sbjct: 482 QKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSL 541
Query: 241 DKAE 244
+A+
Sbjct: 542 SEAD 545
Score = 150 bits (378), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 125/212 (58%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M +G+K +VVTY+SL+ G C + + + M + PDV+++S +I+ K
Sbjct: 271 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 330
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ EA L +M + I P+TITYNSLIDG CK + A ++ D M +G DI+TY+
Sbjct: 331 LLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSI 390
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+++ CK VD G+ L +++ KG+ P+ TYN L+ G C+ G++ A+E+FQ++ +G
Sbjct: 391 LINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 450
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKME 216
+ TY +++GLC G ++AL + KM+
Sbjct: 451 VPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482
Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 130/231 (56%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G++ ++ T +++ YC ++ A +V ++G PD +++S ++NG C V+EA
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 159
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
+ L+ +M K P+ +T ++LI+GLC G+VS A L+D M G D +TY L+
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 219
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
LCK + + L +K+ ++ I+ + Y+I++D LCK G DA +F ++ KG +
Sbjct: 220 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 279
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
TY+++I GLC +G +D+ ++ +M I D +TF +I ++G+
Sbjct: 280 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 330
Score = 127 bits (318), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 127/237 (53%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ P + +N L + + M G+ D+ + +IMIN C+ K
Sbjct: 61 MIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKK 120
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ A ++L + P+TIT+++L++G C G+VS A L+D M Q D++T ++
Sbjct: 121 LLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVST 180
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++ LC V + + LI ++++ G QPD TY +L+ LCK G A ++F+ + ++
Sbjct: 181 LINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN 240
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
+ Y+ +I+ LCK+G FD+AL+L ++ME G D +T+ ++I L G+ D
Sbjct: 241 IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWD 297
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 112/206 (54%)
Query: 8 QGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNE 67
+G+ PN +TYN+L+ G+C ++N A+ +F M GV P V++Y I+++GLC +N+
Sbjct: 414 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNK 473
Query: 68 ALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 127
AL + ++M ++ YN +I G+C KV +AW L + +G D++TYN +
Sbjct: 474 ALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIG 533
Query: 128 ALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
LCK + + L +K+ + G PD TYNIL+ + + E+ +++ G++
Sbjct: 534 GLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSA 593
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMS 213
++ T +I+ L L L ++S
Sbjct: 594 DSSTIKMVIDMLSDRRLDKSFLDMLS 619
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 105/215 (48%)
Query: 29 EVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYN 88
+VN A +F +M Q P + ++ + + + + K + L K M I + T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 89 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDK 148
+I+ C+ K+ A+ +L G D IT+++ ++ C V + +AL+ ++++
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 149 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 208
+PD+ T + L++GLC GR+ +A + + + G+ + TY ++N LCK G A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 209 LTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
L L KME+ + + +I +L + G D A
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDA 264
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 186 bits (473), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/239 (37%), Positives = 148/239 (61%), Gaps = 2/239 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+++ + PN+VTYNSL++G+C+ + +++AQ +F M PDV++Y+ +ING CK K
Sbjct: 336 MIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKK 395
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V + + L + M ++ NT+TY +LI G + NA + +M G +I+TYN+
Sbjct: 396 VVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNT 455
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
LD LCK ++K + + + + ++PD+ TYNI+ +G+CK G+++D ++F L KG
Sbjct: 456 LLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKG 515
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ YNTMI+G CK+GL +EA TL KM+++G + D T+ T+I A G DKA
Sbjct: 516 VKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG--DKA 572
Score = 165 bits (418), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 141/243 (58%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L+ M+++ + PNVVT+NSL+D + ++ +A+ +F+ M Q + P++++Y+ +ING C
Sbjct: 297 LLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFC 356
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++EA + M S+ +P+ +TYN+LI+G CK KV + EL +M RG + +
Sbjct: 357 MHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV 416
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY + + + D + K+++ G+ P++ TYN LLDGLCK G+++ A VF+ L
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 476
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
K + +TYN M G+CK G ++ L + G D I + T+IS +KG
Sbjct: 477 QKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLK 536
Query: 241 DKA 243
++A
Sbjct: 537 EEA 539
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 147/244 (60%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L MMK G P++VT NSL++G+C N +++A A+ + M +MG PD ++++ +++GL
Sbjct: 122 ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 181
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ +EA+ L+++M + P+ +TY ++I+GLCK G+ A LL++M AD++
Sbjct: 182 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 241
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
Y++ +D+LCK HVD + L ++ +KGI+PD+ TY+ L+ LC GR DA + D+
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
++ N N T+N++I+ KEG EA L +M + +T+ ++I+
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
Query: 241 DKAE 244
D+A+
Sbjct: 362 DEAQ 365
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 139/240 (57%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ +G +P++VTY ++++G C E + A + N M + + DV+ YS +I+ LCK +
Sbjct: 196 MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRH 255
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V++ALNL +M ++ I P+ TY+SLI LC G+ S+A LL +M R +++T+NS
Sbjct: 256 VDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNS 315
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+DA K + + L ++I + I P++ TYN L++G C R+ +AQ++F + K
Sbjct: 316 LIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 375
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ TYNT+ING CK + + L M G + + +T+ T+I F+ + D A+
Sbjct: 376 CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQ 435
Score = 154 bits (390), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 135/243 (55%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M K ++ +VV Y++++D C V+ A +F M G+ PDV +YS +I+ LC
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++A LL M KI PN +T+NSLID K GK+ A +L DEM R +I+
Sbjct: 287 NYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 346
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYNS ++ C +D+ + ++ K PD+ TYN L++G CK ++ D E+F+D+
Sbjct: 347 TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
++G N TY T+I+G + D A + +M +G + +T+ T++ L + G+
Sbjct: 407 SRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 466
Query: 241 DKA 243
+KA
Sbjct: 467 EKA 469
Score = 134 bits (338), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 136/236 (57%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
GV N+ TYN +++ C ++++ A A+ M ++G P +++ + ++NG C ++EA
Sbjct: 95 GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
+ L+ QM P+T+T+ +L+ GL + K S A L++ M V+G D++TY + ++
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 214
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
LCK D + L+ K+ I+ D+ Y+ ++D LCK + DA +F ++ KG +
Sbjct: 215 LCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPD 274
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+TY+++I+ LC G + +A L+S M + + +TF ++I A ++G+ +AE
Sbjct: 275 VFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 129/239 (53%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ M+K P++V ++ L+ + + + + M +GV ++ +Y+IMIN LC
Sbjct: 52 LFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLC 111
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ ++ AL +L +M P+ +T NSL++G C ++S A L+D+M G D +
Sbjct: 112 RRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTV 171
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
T+ + + L + + + +AL+++++ KG QPD+ TY +++GLCK G A + +
Sbjct: 172 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 231
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
K + Y+T+I+ LCK D+AL L ++M++ G D T+ ++IS L G
Sbjct: 232 EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 290
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 118/215 (54%)
Query: 29 EVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYN 88
++++A +F M + FP ++ +S +++ + KMK + ++ ++M + N TYN
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 89 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDK 148
+I+ LC+ ++S A +L +M G I+T NS L+ C G+ + + +AL+ ++++
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 149 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 208
G QPD T+ L+ GL + + +A + + + KG + TY +INGLCK G D A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 209 LTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
L L++KME D + + T+I +L + D A
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 184 bits (468), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 87/239 (36%), Positives = 150/239 (62%), Gaps = 2/239 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+K+ + P++ TY+SL++G+C+ + +++A+ +F M FP+V++Y+ +I G CK K
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V E + L ++M ++ NT+TYN+LI GL + G A ++ +M G P DIITY+
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
LD LCK ++K + + + + ++PD+ TYNI+++G+CK G+++D ++F L KG
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
N Y TMI+G C++GL +EA L +M+++G + + T+ T+I A G DKA
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDG--DKA 587
Score = 171 bits (434), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 143/244 (58%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L+ M+++ + PNVVT+++L+D + ++ +A+ +++ M + + PD+ +YS +ING C
Sbjct: 312 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++EA ++ + M S+ PN +TYN+LI G CK +V EL EM RG + +
Sbjct: 372 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN+ + L + D + KK++ G+ PD+ TY+ILLDGLCK G+++ A VF+ L
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
K + +TYN MI G+CK G ++ L + G + I + T+IS KG
Sbjct: 492 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 551
Query: 241 DKAE 244
++A+
Sbjct: 552 EEAD 555
Score = 159 bits (403), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 142/240 (59%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ +G +P++ TY ++++G C +++ A ++ M + + DV+ Y+ +I+ LC K
Sbjct: 211 MVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKN 270
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
VN+ALNL +M ++ I PN +TYNSLI LC G+ S+A LL +M R +++T+++
Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+DA K + + L ++I + I PD+ TY+ L++G C R+ +A+ +F+ + K
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
N TYNT+I G CK +E + L +M G + + +T+ T+I LF+ G+ D A+
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 135/243 (55%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M K ++ +VV Y +++D C VN A +F M G+ P+V++Y+ +I LC
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++A LL M KI PN +T+++LID K GK+ A +L DEM R DI
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY+S ++ C +D+ + + +I K P++ TYN L+ G CK R+++ E+F+++
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
++G N TYNT+I GL + G D A + KM +G D IT+ ++ L + G+
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 481
Query: 241 DKA 243
+KA
Sbjct: 482 EKA 484
Score = 147 bits (370), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 129/224 (57%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALN 70
+PN VT+N+L+ G L N+ ++A A+ + M G PD+ +Y ++NGLCK ++ AL+
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 71 LLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 130
LLK+M KI + + Y ++ID LC V++A L EM +G +++TYNS + LC
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 131 KGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 190
L+ +I++ I P++ T++ L+D K G++ +A++++ ++ K+ + + +
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Query: 191 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
TY+++ING C DEA + M C + +T+ T+I
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405
Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 133/232 (57%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
++ +YN L++ +C +++ A AV M ++G PD+++ S ++NG C K ++EA+ L+
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 173
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 132
QM + PNT+T+N+LI GL K S A L+D M RG D+ TY + ++ LCK
Sbjct: 174 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 233
Query: 133 HHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 192
+D ++L+KK+ I+ D+ Y ++D LC + DA +F ++ KG N TY
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293
Query: 193 NTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
N++I LC G + +A L+S M + + +TF +I A ++G+ +AE
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 116/209 (55%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M ++G+ N VTYN+L+ G + + AQ +F M GV PD+++YSI+++GLCK
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ +AL + + + K+ P+ TYN +I+G+CK GKV + W+L + ++G ++I Y +
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ C+ ++ AL +++ + G P+ TYN L+ + G + E+ +++ G
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 600
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMS 213
+ + T + +IN L L L ++S
Sbjct: 601 FVGDASTISMVINMLHDGRLEKSYLEMLS 629
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 126/235 (53%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ P++V +N L+ +N+ + ++ M + + D+ SY+I+IN C+
Sbjct: 71 MVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQ 130
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ AL +L +M P+ +T +SL++G C ++S A L+D+M V + +T+N+
Sbjct: 131 LPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNT 190
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ L + + +ALI +++ +G QPD+ TY +++GLCK G I A + + + K
Sbjct: 191 LIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK 250
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
+ Y T+I+ LC ++AL L ++M++ G + +T+ ++I L G
Sbjct: 251 IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 305
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 111/206 (53%)
Query: 29 EVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYN 88
+++ A +F M Q P ++ ++ +++ + KM + ++L ++M + +I + +YN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 89 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDK 148
LI+ C+ ++ A +L +M G DI+T +S L+ C G + + +AL+ ++
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 149 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 208
QP+ T+N L+ GL + +A + + +G + +TY T++NGLCK G D A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 209 LTLMSKMEDNGCIHDPITFETIISAL 234
L+L+ KME D + + TII AL
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDAL 265
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 111/219 (50%), Gaps = 8/219 (3%)
Query: 29 EVNKAQAVFNTMTQMGVFPDVLSY----SIMINGLCKMKMVNEALNLLKQMHSEKIIPNT 84
++ KA +F+ GV+ SY + N L +K+ ++A++L +M + +P+
Sbjct: 25 QLRKASPLFSLR---GVYFSAASYDYREKLSRNVLLDLKL-DDAVDLFGEMVQSRPLPSI 80
Query: 85 ITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKK 144
+ +N L+ + K K L + M D+ +YN ++ C+ + +A++ K
Sbjct: 81 VEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGK 140
Query: 145 VIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGL 204
++ G +PD+ T + LL+G C RI +A + +F Y N T+NT+I+GL
Sbjct: 141 MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNK 200
Query: 205 FDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
EA+ L+ +M GC D T+ T+++ L ++G+ D A
Sbjct: 201 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 184 bits (466), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 150/239 (62%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+K+ + P++VTY+SL++G+C+ + +++A+ +F M FPDV++Y+ +I G CK K
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 411
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V E + + ++M ++ NT+TYN LI GL + G A E+ EM G P +I+TYN+
Sbjct: 412 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
LD LCK ++K + + + + ++P + TYNI+++G+CK G+++D ++F +L KG
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 531
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ YNTMI+G C++G +EA L +M+++G + + + T+I A G+ + +
Sbjct: 532 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 590
Score = 158 bits (400), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 138/244 (56%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L+ M+++ + P+V T+++L+D + ++ +A+ +++ M + + P +++YS +ING C
Sbjct: 313 LLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 372
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++EA + + M S+ P+ +TYN+LI G CK +V E+ EM RG + +
Sbjct: 373 MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 432
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN + L + D + K+++ G+ P++ TYN LLDGLCK G+++ A VF+ L
Sbjct: 433 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+ +TYN MI G+CK G ++ L + G D + + T+IS KG
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 552
Query: 241 DKAE 244
++A+
Sbjct: 553 EEAD 556
Score = 158 bits (400), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 142/240 (59%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ +G +P++VTY +++G C + + A + N M Q + P VL Y+ +I+GLCK K
Sbjct: 212 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 271
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+++ALNL K+M ++ I PN +TY+SLI LC G+ S+A LL +M R D+ T+++
Sbjct: 272 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+DA K + + L +++ + I P + TY+ L++G C R+ +A+++F+ + K
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 391
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ TYNT+I G CK +E + + +M G + + +T+ +I LF+ G+ D A+
Sbjct: 392 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 451
Score = 157 bits (397), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 131/230 (56%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M G +PN VT+N+L+ G L N+ ++A A+ + M G PD+++Y +++NGLCK
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 236
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ A NLL +M K+ P + YN++IDGLCK + +A L EM +G +++TY+S
Sbjct: 237 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSS 296
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ LC L+ +I++ I PD+ T++ L+D K G++ +A++++ ++ K+
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 356
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
+ + TY+++ING C DEA + M C D +T+ T+I
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGF 406
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 137/239 (57%), Gaps = 1/239 (0%)
Query: 6 MKQG-VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+QG ++P V+ YN+++DG C ++ A +F M G+ P+V++YS +I+ LC
Sbjct: 247 MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 306
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++A LL M KI P+ T+++LID K GK+ A +L DEM R I+TY+S
Sbjct: 307 WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 366
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++ C +D+ + + ++ K PD+ TYN L+ G CK R+++ EVF+++ ++G
Sbjct: 367 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 426
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
N TYN +I GL + G D A + +M +G + +T+ T++ L + G+ +KA
Sbjct: 427 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 134/240 (55%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M G+ N TY+ L++ +C +++ A AV M ++G P++++ S ++NG C K
Sbjct: 107 MQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR 166
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++EA+ L+ QM PNT+T+N+LI GL K S A L+D M +G D++TY
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV 226
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++ LCK D L+ K+ ++P + YN ++DGLCK + DA +F+++ KG
Sbjct: 227 VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 286
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
N TY+++I+ LC G + +A L+S M + D TF +I A ++G+ +AE
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 346
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 133/243 (54%), Gaps = 1/243 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M M+ + P+VVTYN+L+ G+C V + VF M+Q G+ + ++Y+I+I GL
Sbjct: 383 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 442
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + A + K+M S+ + PN +TYN+L+DGLCK GK+ A + + + I
Sbjct: 443 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 502
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN ++ +CK V+ G L + KG++PD+ YN ++ G C+ G ++A +F+++
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+ G N+ YNT+I ++G + + L+ +M G D T +++ + G
Sbjct: 563 KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRL 621
Query: 241 DKA 243
DK+
Sbjct: 622 DKS 624
Score = 138 bits (348), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 131/235 (55%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M +G++PNVVTY+SL+ C + A + + M + + PDV ++S +I+ K
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ EA L +M I P+ +TY+SLI+G C ++ A ++ + M + D++TYN+
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ CK V++G+ + +++ +G+ + TYNIL+ GL + G AQE+F+++ G
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 461
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
N TYNT+++GLCK G ++A+ + ++ + T+ +I + + G+
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 129/239 (53%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ M+K P+++ ++ L+ +N+ + ++ M +G+ + +YSI+IN C
Sbjct: 68 LFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFC 127
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + AL +L +M PN +T +SL++G C + ++S A L+D+M V G + +
Sbjct: 128 RRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTV 187
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
T+N+ + L + + +ALI +++ KG QPD+ TY ++++GLCK G A + +
Sbjct: 188 TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM 247
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
+ YNT+I+GLCK D+AL L +ME G + +T+ ++IS L G
Sbjct: 248 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 306
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 110/215 (51%)
Query: 29 EVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYN 88
+++ A A+F M + FP ++ +S +++ + KM + ++L +QM + I N TY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 89 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDK 148
LI+ C+ ++ A +L +M G +I+T +S L+ C + + +AL+ ++
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 149 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 208
G QP+ T+N L+ GL + +A + + KG + TY ++NGLCK G D A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 209 LTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
L++KME + + TII L + D A
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 180 bits (456), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 149/239 (62%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+K+ + P++ TY+SL++G+C+ + +++A+ +F M FP+V++YS +I G CK K
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V E + L ++M ++ NT+TY +LI G + NA + +M G +I+TYN
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
LD LCK + K + + + + ++PD+ TYNI+++G+CK G+++D E+F +L KG
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG 533
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ N YNTMI+G C++G +EA +L+ KM+++G + + T+ T+I A G+ + +
Sbjct: 534 VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREAS 592
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 140/244 (57%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L+ M+++ + PNVVT+++L+D + ++ +A+ +++ M + + PD+ +YS +ING C
Sbjct: 315 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 374
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++EA ++ + M S+ PN +TY++LI G CK +V EL EM RG + +
Sbjct: 375 MHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY + + + D + K+++ G+ P++ TYNILLDGLCK G++ A VF+ L
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 494
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+ + +TYN MI G+CK G ++ L + G + I + T+IS KG
Sbjct: 495 QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSK 554
Query: 241 DKAE 244
++A+
Sbjct: 555 EEAD 558
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 139/244 (56%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+LA MMK G +P++VT +SL++GYC ++ A A+ + M +MG PD +++ +I+GL
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+EA+ L+ QM P+ +TY ++++GLCK G + A LL +M AD++
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 259
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
YN+ +D LCK H+D + L ++ +KGI+PD+ TY+ L+ LC GR DA + D+
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 319
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
++ N N T++ +I+ KEG EA L +M D T+ ++I+
Sbjct: 320 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 379
Query: 241 DKAE 244
D+A+
Sbjct: 380 DEAK 383
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 134/230 (58%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ G KP+ T+ +L+ G L N+ ++A A+ + M Q G PD+++Y ++NGLCK
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++ AL+LLK+M KI + + YN++IDGLCK + +A L EM +G D+ TY+S
Sbjct: 239 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSS 298
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ LC L+ +I++ I P++ T++ L+D K G++ +A++++ ++ K+
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
+ + +TY+++ING C DEA + M C + +T+ T+I
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGF 408
Score = 153 bits (386), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 143/240 (59%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+++G +P++VTY ++++G C +++ A ++ M + + DV+ Y+ +I+GLCK K
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKH 273
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+++ALNL +M ++ I P+ TY+SLI LC G+ S+A LL +M R +++T+++
Sbjct: 274 MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 333
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+DA K + + L ++I + I PD+ TY+ L++G C R+ +A+ +F+ + K
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 393
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
N TY+T+I G CK +E + L +M G + + +T+ T+I F+ + D A+
Sbjct: 394 CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 453
Score = 144 bits (364), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 140/240 (58%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M G+ ++ TY+ ++ +C ++++ A AV M ++G PD+++ S ++NG C K
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+++A+ L+ QM P+T T+ +LI GL K S A L+D+M RG D++TY +
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++ LCK +D ++L+KK+ I+ D+ YN ++DGLCK + DA +F ++ KG
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ +TY+++I+ LC G + +A L+S M + + +TF +I A ++G+ +AE
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 133/243 (54%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M K ++ +VV YN+++DG C ++ A +F M G+ PDV +YS +I+ LC
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++A LL M KI PN +T+++LID K GK+ A +L DEM R DI
Sbjct: 305 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 364
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY+S ++ C +D+ + + +I K P++ TY+ L+ G CK R+++ E+F+++
Sbjct: 365 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM 424
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
++G N TY T+I+G + D A + +M G + +T+ ++ L + G+
Sbjct: 425 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 484
Query: 241 DKA 243
KA
Sbjct: 485 AKA 487
Score = 134 bits (336), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 129/235 (54%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+K P++V +N L+ +N+ ++ M +G+ D+ +YSI IN C+
Sbjct: 74 MVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQ 133
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++ AL +L +M P+ +T +SL++G C + ++S+A L+D+M G D T+ +
Sbjct: 134 LSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTT 193
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ L + + +AL+ +++ +G QPD+ TY +++GLCK G I A + + + K
Sbjct: 194 LIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGK 253
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
+ YNT+I+GLCK D+AL L ++M++ G D T+ ++IS L G
Sbjct: 254 IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 308
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 117/205 (57%), Gaps = 1/205 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M ++G+ N VTY +L+ G+ + + AQ VF M +GV P++L+Y+I+++GLCK
Sbjct: 424 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 483
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ +A+ + + + + P+ TYN +I+G+CK GKV + WEL + ++G ++I YN+
Sbjct: 484 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNT 543
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ C+ ++ +L+KK+ + G P+ TYN L+ + G + + E+ +++ G
Sbjct: 544 MISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCG 603
Query: 185 YNLNNWTYNTMINGLCKEGLFDEAL 209
+ + T + N L +G D++
Sbjct: 604 FAGDASTIGLVTNML-HDGRLDKSF 627
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 112/215 (52%)
Query: 29 EVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYN 88
+V+ A +F M + FP ++ ++ +++ + KM ++L +QM + I + TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 89 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDK 148
I+ C+ ++S A +L +M G DI+T +S L+ C + +AL+ ++++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 149 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 208
G +PD T+ L+ GL + +A + + ++G + TY T++NGLCK G D A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 209 LTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
L+L+ KME D + + TII L + D A
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 277
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 102/190 (53%)
Query: 54 IMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVR 113
I+ N L + V++A++L M + P+ + +N L+ + K K L ++M
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 114 GQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDA 173
G D+ TY+ F++ C+ + +A++ K++ G +PD+ T + LL+G C RI DA
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 174 QEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
+ + + GY + +T+ T+I+GL EA+ L+ +M GC D +T+ T+++
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 234 LFEKGENDKA 243
L ++G+ D A
Sbjct: 233 LCKRGDIDLA 242
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 180 bits (456), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 146/234 (62%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M G+KPN V +N L+ +C + + +A +F M + G PDV +++ +I+GLC++
Sbjct: 450 MSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE 509
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ AL LL+ M SE ++ NT+TYN+LI+ + G++ A +L++EM +G P D ITYNS
Sbjct: 510 IKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNS 569
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ LC+ VDK +L +K++ G P + NIL++GLC+ G +++A E +++ +G
Sbjct: 570 LIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG 629
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
+ T+N++INGLC+ G ++ LT+ K++ G D +TF T++S L + G
Sbjct: 630 STPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGG 683
Score = 161 bits (408), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 133/235 (56%), Gaps = 1/235 (0%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTM-TQMGVFPDVLSYSIMINGLCKMKMVNEAL 69
KP +V +N+L+ G+ ++ A+AV + M T G+ PDV +Y+ +I G K +V AL
Sbjct: 350 KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
+L M ++ PN +Y L+DG CK GK+ A+ +L+EM G + + +N + A
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469
Query: 130 CKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 189
CK H + + + + +++ KG +PD+ T+N L+ GLC+ IK A + +D+ +G N
Sbjct: 470 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 529
Query: 190 WTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
TYNT+IN + G EA L+++M G D IT+ ++I L GE DKA
Sbjct: 530 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKAR 584
Score = 157 bits (397), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 136/235 (57%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G+ P+V TYNSL+ GY V A V + M G P+V SY+I+++G CK+ ++EA
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 443
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
N+L +M ++ + PNT+ +N LI CK ++ A E+ EM +G D+ T+NS +
Sbjct: 444 YNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 503
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
LC+ + + L++ +I +G+ + TYN L++ + G IK+A+++ ++ +G L+
Sbjct: 504 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLD 563
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
TYN++I GLC+ G D+A +L KM +G I+ +I+ L G ++A
Sbjct: 564 EITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEA 618
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 136/238 (57%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M ++G KP+V T+NSL+ G C V+E+ A + M GV + ++Y+ +IN +
Sbjct: 485 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGE 544
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ EA L+ +M + + ITYNSLI GLC+ G+V A L ++M G I+ N
Sbjct: 545 IKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNI 604
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++ LC+ V++ + K+++ +G PD+ T+N L++GLC+ GRI+D +F+ L +G
Sbjct: 605 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 664
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 242
+ T+NT+++ LCK G +A L+ + ++G + + T+ ++ ++ + D+
Sbjct: 665 IPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 121/207 (58%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M+ +GV N VTYN+L++ + E+ +A+ + N M G D ++Y+ +I GLC
Sbjct: 516 LLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLC 575
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ V++A +L ++M + P+ I+ N LI+GLC++G V A E EM +RG DI+
Sbjct: 576 RAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIV 635
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
T+NS ++ LC+ ++ G+ + +K+ +GI PD T+N L+ LCK G + DA + +
Sbjct: 636 TFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEG 695
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDE 207
+ G+ N+ T++ ++ + + D
Sbjct: 696 IEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 123/229 (53%), Gaps = 5/229 (2%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALN 70
+P +YN +++ N A VF M + P + ++ +++ C + ++ AL+
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALS 238
Query: 71 LLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 130
LL+ M +PN++ Y +LI L K +V+ A +LL+EM + G D T+N + LC
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298
Query: 131 KGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 190
K +++ ++ +++ +G PD TY L++GLCK GR+ A+++F + K +
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVI--- 355
Query: 191 TYNTMINGLCKEGLFDEALTLMSKMEDN-GCIHDPITFETIISALFEKG 238
+NT+I+G G D+A ++S M + G + D T+ ++I +++G
Sbjct: 356 -FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEG 403
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 81/163 (49%)
Query: 82 PNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIAL 141
P +YN +++ L A + +M R P + T+ + A C + +D ++L
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 142 IKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCK 201
++ + G P+ Y L+ L KC R+ +A ++ +++F G + T+N +I GLCK
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299
Query: 202 EGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+EA ++++M G D IT+ +++ L + G D A+
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAK 342
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 179 bits (454), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 150/244 (61%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M+K G +P+ VT SL++G+C N V+ A ++ + M ++G PD+++Y+ +I+ LC
Sbjct: 142 ILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLC 201
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K K VN+A + K++ + I PN +TY +L++GLC + + S+A LL +M + ++I
Sbjct: 202 KTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVI 261
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY++ LDA K V + L ++++ I PD+ TY+ L++GLC RI +A ++F +
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
KG + +YNT+ING CK ++ + L +M G + + +T+ T+I F+ G+
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 381
Query: 241 DKAE 244
DKA+
Sbjct: 382 DKAQ 385
Score = 171 bits (433), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 144/238 (60%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L+ M+K+ + PNV+TY++L+D + +V +A+ +F M +M + PD+++YS +INGLC
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 306
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++EA + M S+ + + ++YN+LI+G CK +V + +L EM RG ++ +
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 366
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN+ + + VDK ++ GI PD+ TYNILL GLC G ++ A +F+D+
Sbjct: 367 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
K+ +L+ TY T+I G+CK G +EA +L + G D +T+ T++S L KG
Sbjct: 427 QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
Score = 169 bits (427), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 139/239 (58%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ G KP++V YN+++D C VN A F + + G+ P+V++Y+ ++NGLC
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++A LL M +KI PN ITY++L+D K GKV A EL +EM DI+TY+S
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++ LC +D+ + ++ KG D+ +YN L++G CK R++D ++F+++ ++G
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
N TYNT+I G + G D+A S+M+ G D T+ ++ L + GE +KA
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKA 419
Score = 162 bits (411), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 129/224 (57%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ + P++VTY+SL++G CL + +++A +F+ M G DV+SY+ +ING CK K
Sbjct: 286 MVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKR 345
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V + + L ++M ++ NT+TYN+LI G + G V A E +M G DI TYN
Sbjct: 346 VEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNI 405
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
L LC ++K + + + + + + D+ TY ++ G+CK G++++A +F L KG
Sbjct: 406 LLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKG 465
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFE 228
+ TY TM++GLC +GL E L +KM+ G + + T
Sbjct: 466 LKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 145 bits (366), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 134/226 (59%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G++ ++ T+N +++ +C +V+ A ++ M ++G PD ++ ++NG C+ V++A
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 174
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
++L+ +M P+ + YN++ID LCKT +V++A++ E+ +G +++TY + ++
Sbjct: 175 VSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG 234
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
LC L+ +I K I P++ TY+ LLD K G++ +A+E+F+++ + + +
Sbjct: 235 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
TY+++INGLC DEA + M GC+ D +++ T+I+
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGF 340
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 126/234 (53%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ + M+K P++V +N L+ + + + ++ M +G+ D+ +++I+IN C
Sbjct: 72 LFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFC 131
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
V+ AL++L +M P+ +T SL++G C+ +VS+A L+D+M G DI+
Sbjct: 132 CCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIV 191
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
YN+ +D+LCK V+ K++ KGI+P++ TY L++GLC R DA + D+
Sbjct: 192 AYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM 251
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
KK N TY+ +++ K G EA L +M D +T+ ++I+ L
Sbjct: 252 IKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 116/211 (54%)
Query: 29 EVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYN 88
++N A +F+ M + FP ++ ++ +++ + K+K + ++L K+M I + T+N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 89 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDK 148
+I+ C +VS A +L +M G D +T S ++ C+ + V ++L+ K+++
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 149 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 208
G +PD+ YN ++D LCK R+ DA + F+++ +KG N TY ++NGLC + +A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 209 LTLMSKMEDNGCIHDPITFETIISALFEKGE 239
L+S M + IT+ ++ A + G+
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGK 275
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 105/191 (54%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M +M+ +G +VV+YN+L++G+C V +F M+Q G+ + ++Y+ +I G
Sbjct: 317 MFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFF 376
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ V++A QM I P+ TYN L+ GLC G++ A + ++M R DI+
Sbjct: 377 QAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIV 436
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY + + +CK V++ +L + KG++PD+ TY ++ GLC G + + + ++ +
Sbjct: 437 TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Query: 181 FKKGYNLNNWT 191
++G N+ T
Sbjct: 497 KQEGLMKNDCT 507
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 179 bits (453), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 140/244 (57%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
++ VM ++G+KPN Y S++ C + ++ +A+ F+ M + G+ PD + Y+ +I+G C
Sbjct: 303 LIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFC 362
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + A +MHS I P+ +TY ++I G C+ G + A +L EM +G D +
Sbjct: 363 KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSV 422
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
T+ ++ CK H+ + +I G P++ TY L+DGLCK G + A E+ ++
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+K G N +TYN+++NGLCK G +EA+ L+ + E G D +T+ T++ A + GE
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Query: 241 DKAE 244
DKA+
Sbjct: 543 DKAQ 546
Score = 155 bits (392), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 130/229 (56%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M +G++P+ VT+ L++GYC + A V N M Q G P+V++Y+ +I+GLCK
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++ A LL +M + PN TYNS+++GLCK+G + A +L+ E G AD +TY +
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+DA CK +DK ++K+++ KG+QP + T+N+L++G C G ++D +++ + KG
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
N T+N+++ C A + M G D T+E ++
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 640
Score = 155 bits (391), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 139/244 (56%), Gaps = 2/244 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L +M +G P+V++Y+++++GYC E++K + M + G+ P+ Y +I LC
Sbjct: 268 LLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLC 327
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++ + EA +M + I+P+T+ Y +LIDG CK G + A + EMH R D++
Sbjct: 328 RICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVL 387
Query: 121 TYNSFLDALCK-GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
TY + + C+ G V+ G L ++ KG++PD T+ L++G CK G +KDA V
Sbjct: 388 TYTAIISGFCQIGDMVEAG-KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNH 446
Query: 180 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
+ + G + N TY T+I+GLCKEG D A L+ +M G + T+ +I++ L + G
Sbjct: 447 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 506
Query: 240 NDKA 243
++A
Sbjct: 507 IEEA 510
Score = 152 bits (383), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 129/227 (56%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M + + P+V+TY +++ G+C + ++ +A +F+ M G+ PD ++++ +ING CK
Sbjct: 377 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGH 436
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ +A + M PN +TY +LIDGLCK G + +A ELL EM G +I TYNS
Sbjct: 437 MKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 496
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++ LCK ++++ + L+ + G+ D TY L+D CK G + AQE+ +++ KG
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 231
T+N ++NG C G+ ++ L++ M G + TF +++
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 151 bits (382), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 133/230 (57%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++QG+ P+ V Y +L+DG+C ++ A F M + PDVL+Y+ +I+G C++
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ EA L +M + + P+++T+ LI+G CK G + +A+ + + M G +++TY +
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 461
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D LCK +D L+ ++ G+QP++ TYN +++GLCK G I++A ++ + G
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
N + TY T+++ CK G D+A ++ +M G +TF +++
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 129/233 (55%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ G PNVVTY +L+DG C +++ A + + M ++G+ P++ +Y+ ++NGLCK
Sbjct: 447 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 506
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ EA+ L+ + + + +T+TY +L+D CK+G++ A E+L EM +G I+T+N
Sbjct: 507 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 566
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++ C ++ G L+ ++ KGI P+ T+N L+ C +K A +++D+ +G
Sbjct: 567 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK 237
+ TY ++ G CK EA L +M+ G T+ +I ++
Sbjct: 627 VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKR 679
Score = 127 bits (318), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 124/228 (54%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M K G++PN+ TYNS+++G C + +A + G+ D ++Y+ +++ C
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K +++A +LK+M + + P +T+N L++G C G + + +LL+ M +G +
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
T+NS + C +++ A+ K + +G+ PD TY L+ G CK +K+A +FQ++
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFE 228
KG++++ TY+ +I G K F EA + +M G D F+
Sbjct: 658 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 121/246 (49%), Gaps = 35/246 (14%)
Query: 33 AQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLID 92
A VF ++GV +V SY+I+I+ +C++ + EA +LL M + P+ I+Y+++++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 93 GLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQP 152
G C+ G++ W+L++ M +G + Y S + LC+ + + ++I +GI P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 153 DMCTYNILLDGLCKCGRIK-----------------------------------DAQEVF 177
D Y L+DG CK G I+ +A ++F
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 178 QDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK 237
++F KG ++ T+ +ING CK G +A + + M GC + +T+ T+I L ++
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 238 GENDKA 243
G+ D A
Sbjct: 470 GDLDSA 475
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 76/147 (51%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M+ +G+ PN T+NSL+ YC+ N + A A++ M GV PD +Y ++ G C
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 642
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + + EA L ++M + + TY+ LI G K K A E+ D+M G AD
Sbjct: 643 KARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKE 702
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVID 147
++ F D KG D + I ++I+
Sbjct: 703 IFDFFSDTKYKGKRPDTIVDPIDEIIE 729
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 73/149 (48%), Gaps = 1/149 (0%)
Query: 87 YNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG-HHVDKGIALIKKV 145
++ L G + A + ++M G + + N +L L K + I + ++
Sbjct: 178 FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREF 237
Query: 146 IDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLF 205
+ G+ ++ +YNI++ +C+ GRIK+A + + KGY + +Y+T++NG C+ G
Sbjct: 238 PEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGEL 297
Query: 206 DEALTLMSKMEDNGCIHDPITFETIISAL 234
D+ L+ M+ G + + +II L
Sbjct: 298 DKVWKLIEVMKRKGLKPNSYIYGSIIGLL 326
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 179 bits (453), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 140/244 (57%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
++ VM ++G+KPN Y S++ C + ++ +A+ F+ M + G+ PD + Y+ +I+G C
Sbjct: 303 LIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFC 362
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + A +MHS I P+ +TY ++I G C+ G + A +L EM +G D +
Sbjct: 363 KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSV 422
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
T+ ++ CK H+ + +I G P++ TY L+DGLCK G + A E+ ++
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+K G N +TYN+++NGLCK G +EA+ L+ + E G D +T+ T++ A + GE
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Query: 241 DKAE 244
DKA+
Sbjct: 543 DKAQ 546
Score = 155 bits (392), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 130/229 (56%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M +G++P+ VT+ L++GYC + A V N M Q G P+V++Y+ +I+GLCK
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++ A LL +M + PN TYNS+++GLCK+G + A +L+ E G AD +TY +
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+DA CK +DK ++K+++ KG+QP + T+N+L++G C G ++D +++ + KG
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
N T+N+++ C A + M G D T+E ++
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 640
Score = 155 bits (391), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 139/244 (56%), Gaps = 2/244 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L +M +G P+V++Y+++++GYC E++K + M + G+ P+ Y +I LC
Sbjct: 268 LLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLC 327
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++ + EA +M + I+P+T+ Y +LIDG CK G + A + EMH R D++
Sbjct: 328 RICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVL 387
Query: 121 TYNSFLDALCK-GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
TY + + C+ G V+ G L ++ KG++PD T+ L++G CK G +KDA V
Sbjct: 388 TYTAIISGFCQIGDMVEAG-KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNH 446
Query: 180 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
+ + G + N TY T+I+GLCKEG D A L+ +M G + T+ +I++ L + G
Sbjct: 447 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 506
Query: 240 NDKA 243
++A
Sbjct: 507 IEEA 510
Score = 152 bits (383), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 129/227 (56%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M + + P+V+TY +++ G+C + ++ +A +F+ M G+ PD ++++ +ING CK
Sbjct: 377 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGH 436
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ +A + M PN +TY +LIDGLCK G + +A ELL EM G +I TYNS
Sbjct: 437 MKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 496
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++ LCK ++++ + L+ + G+ D TY L+D CK G + AQE+ +++ KG
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 231
T+N ++NG C G+ ++ L++ M G + TF +++
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 151 bits (382), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 133/230 (57%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++QG+ P+ V Y +L+DG+C ++ A F M + PDVL+Y+ +I+G C++
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ EA L +M + + P+++T+ LI+G CK G + +A+ + + M G +++TY +
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 461
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D LCK +D L+ ++ G+QP++ TYN +++GLCK G I++A ++ + G
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
N + TY T+++ CK G D+A ++ +M G +TF +++
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 129/233 (55%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ G PNVVTY +L+DG C +++ A + + M ++G+ P++ +Y+ ++NGLCK
Sbjct: 447 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 506
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ EA+ L+ + + + +T+TY +L+D CK+G++ A E+L EM +G I+T+N
Sbjct: 507 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 566
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++ C ++ G L+ ++ KGI P+ T+N L+ C +K A +++D+ +G
Sbjct: 567 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK 237
+ TY ++ G CK EA L +M+ G T+ +I ++
Sbjct: 627 VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKR 679
Score = 127 bits (318), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 124/228 (54%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M K G++PN+ TYNS+++G C + +A + G+ D ++Y+ +++ C
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K +++A +LK+M + + P +T+N L++G C G + + +LL+ M +G +
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
T+NS + C +++ A+ K + +G+ PD TY L+ G CK +K+A +FQ++
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFE 228
KG++++ TY+ +I G K F EA + +M G D F+
Sbjct: 658 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 121/246 (49%), Gaps = 35/246 (14%)
Query: 33 AQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLID 92
A VF ++GV +V SY+I+I+ +C++ + EA +LL M + P+ I+Y+++++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 93 GLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQP 152
G C+ G++ W+L++ M +G + Y S + LC+ + + ++I +GI P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 153 DMCTYNILLDGLCKCGRIK-----------------------------------DAQEVF 177
D Y L+DG CK G I+ +A ++F
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 178 QDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK 237
++F KG ++ T+ +ING CK G +A + + M GC + +T+ T+I L ++
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 238 GENDKA 243
G+ D A
Sbjct: 470 GDLDSA 475
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 76/147 (51%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M+ +G+ PN T+NSL+ YC+ N + A A++ M GV PD +Y ++ G C
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 642
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + + EA L ++M + + TY+ LI G K K A E+ D+M G AD
Sbjct: 643 KARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKE 702
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVID 147
++ F D KG D + I ++I+
Sbjct: 703 IFDFFSDTKYKGKRPDTIVDPIDEIIE 729
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 73/149 (48%), Gaps = 1/149 (0%)
Query: 87 YNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG-HHVDKGIALIKKV 145
++ L G + A + ++M G + + N +L L K + I + ++
Sbjct: 178 FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREF 237
Query: 146 IDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLF 205
+ G+ ++ +YNI++ +C+ GRIK+A + + KGY + +Y+T++NG C+ G
Sbjct: 238 PEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGEL 297
Query: 206 DEALTLMSKMEDNGCIHDPITFETIISAL 234
D+ L+ M+ G + + +II L
Sbjct: 298 DKVWKLIEVMKRKGLKPNSYIYGSIIGLL 326
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 177 bits (448), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 145/240 (60%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
MMK G +P+VVT +SL++G+C N V A + + M +MG PDV+ Y+ +I+G CK+ +
Sbjct: 130 MMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGL 189
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
VN+A+ L +M + + + +TYNSL+ GLC +G+ S+A L+ +M +R ++IT+ +
Sbjct: 190 VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTA 249
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D K + + L +++ + + PD+ TYN L++GLC GR+ +A+++ + KG
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ TYNT+ING CK DE L +M G + D IT+ TII F+ G D A+
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ 369
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 130/215 (60%), Gaps = 3/215 (1%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M ++ V P+V TYNSL++G C+ V++A+ + + M G PDV++Y+ +ING CK K
Sbjct: 270 MTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKR 329
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V+E L ++M ++ +TITYN++I G + G+ A E+ M R +I TY+
Sbjct: 330 VDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSI 386
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
L LC V+K + L + + I+ D+ TYNI++ G+CK G ++DA ++F+ L KG
Sbjct: 387 LLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKG 446
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 219
+ +Y TMI+G C++ +D++ L KM+++G
Sbjct: 447 LKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 481
Score = 154 bits (388), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 129/218 (59%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+++ M + G +P+VV YN+++DG C + VN A +F+ M + GV D ++Y+ ++ GLC
Sbjct: 161 LVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLC 220
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++A L++ M I+PN IT+ ++ID K GK S A +L +EM R D+
Sbjct: 221 CSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF 280
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYNS ++ LC VD+ ++ ++ KG PD+ TYN L++G CK R+ + ++F+++
Sbjct: 281 TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDN 218
++G + TYNT+I G + G D A + S+M+
Sbjct: 341 AQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR 378
Score = 145 bits (366), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 133/235 (56%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G+ ++ +YN +++ C + A +V M + G PDV++ S +ING C+ V +A
Sbjct: 99 GIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDA 158
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
++L+ +M P+ + YN++IDG CK G V++A EL D M G AD +TYNS +
Sbjct: 159 IDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAG 218
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
LC L++ ++ + I P++ T+ ++D K G+ +A ++++++ ++ + +
Sbjct: 219 LCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPD 278
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+TYN++INGLC G DEA ++ M GC+ D +T+ T+I+ + D+
Sbjct: 279 VFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEG 333
Score = 145 bits (365), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 141/272 (51%), Gaps = 32/272 (11%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M + GV+ + VTYNSL+ G C + A + M + P+V++++ +I+ K
Sbjct: 200 MERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGK 259
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+EA+ L ++M + P+ TYNSLI+GLC G+V A ++LD M +G D++TYN+
Sbjct: 260 FSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNT 319
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGI--------------------------------QP 152
++ CK VD+G L +++ +G+ +P
Sbjct: 320 LINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRP 379
Query: 153 DMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLM 212
++ TY+ILL GLC R++ A +F+++ K L+ TYN +I+G+CK G ++A L
Sbjct: 380 NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLF 439
Query: 213 SKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ G D +++ T+IS K + DK++
Sbjct: 440 RSLSCKGLKPDVVSYTTMISGFCRKRQWDKSD 471
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 110/208 (52%)
Query: 36 VFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLC 95
+F M Q P ++ +S +++ + K K + ++L M I + +YN +I+ LC
Sbjct: 56 LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC 115
Query: 96 KTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMC 155
+ + A ++ +M G D++T +S ++ C+G+ V I L+ K+ + G +PD+
Sbjct: 116 RCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 175
Query: 156 TYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM 215
YN ++DG CK G + DA E+F + + G + TYN+++ GLC G + +A LM M
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235
Query: 216 EDNGCIHDPITFETIISALFEKGENDKA 243
+ + ITF +I ++G+ +A
Sbjct: 236 VMRDIVPNVITFTAVIDVFVKEGKFSEA 263
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 90/166 (54%), Gaps = 3/166 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
ML +M+ +G P+VVTYN+L++G+C V++ +F M Q G+ D ++Y+ +I G
Sbjct: 301 MLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYF 360
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + A + +M S PN TY+ L+ GLC +V A L + M DI
Sbjct: 361 QAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDIT 417
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCK 166
TYN + +CK +V+ L + + KG++PD+ +Y ++ G C+
Sbjct: 418 TYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCR 463
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 96/179 (53%)
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ E ++L +M + +P+ + ++ ++ + K+ L M V G D+ +YN
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++ LC+ ++++ K++ G +PD+ T + L++G C+ R+ DA ++ + + G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ + YNT+I+G CK GL ++A+ L +ME +G D +T+ ++++ L G A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 63/112 (56%), Gaps = 4/112 (3%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
+ + +PN+ TY+ L+ G C+ V KA +F M + + D+ +Y+I+I+G+CK+
Sbjct: 371 IFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIG 430
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQ 115
V +A +L + + + + P+ ++Y ++I G C+ W+ D ++ + Q
Sbjct: 431 NVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCR----KRQWDKSDLLYRKMQ 478
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 176 bits (446), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 140/239 (58%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ +G+ P+ +TY SL+DG+C N ++KA + + M G P++ +++I+ING CK
Sbjct: 359 MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANR 418
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+++ L L ++M ++ +T+TYN+LI G C+ GK++ A EL EM R P +I+TY
Sbjct: 419 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKI 478
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
LD LC +K + + +K+ ++ D+ YNI++ G+C ++ DA ++F L KG
Sbjct: 479 LLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
TYN MI GLCK+G EA L KME++G D T+ +I A G+ K+
Sbjct: 539 VKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKS 597
Score = 161 bits (408), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 138/243 (56%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M ++ +K + V Y+ ++DG C ++ A +FN M G+ ++++Y+I+I G C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++ LL+ M KI PN +T++ LID K GK+ A EL EM RG D I
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 369
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY S +D CK +H+DK ++ ++ KG P++ T+NIL++G CK RI D E+F+ +
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 429
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+G + TYNT+I G C+ G + A L +M + +T++ ++ L + GE+
Sbjct: 430 SLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGES 489
Query: 241 DKA 243
+KA
Sbjct: 490 EKA 492
Score = 152 bits (383), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 135/229 (58%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ G KP+++T N+L++G CL + +A + + M + G P+ ++Y ++N +CK
Sbjct: 184 MVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQ 243
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
A+ LL++M I + + Y+ +IDGLCK G + NA+ L +EM ++G +IITYN
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNI 303
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ C D G L++ +I + I P++ T+++L+D K G++++A+E+ +++ +G
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG 363
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
+ TY ++I+G CKE D+A ++ M GC + TF +I+
Sbjct: 364 IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILING 412
Score = 150 bits (379), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 135/239 (56%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
++K G +PN +T+++L++G CL V++A + + M +MG PD+++ + ++NGLC
Sbjct: 149 IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGK 208
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
EA+ L+ +M PN +TY +++ +CK+G+ + A ELL +M R D + Y+
Sbjct: 209 EAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D LCK +D L ++ KGI ++ TYNIL+ G C GR D ++ +D+ K+
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
N N T++ +I+ KEG EA L +M G D IT+ ++I ++ DKA
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 387
Score = 144 bits (363), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 131/239 (54%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M +G+ N++TYN L+ G+C + + M + + P+V+++S++I+ K
Sbjct: 289 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 348
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ EA L K+M I P+TITY SLIDG CK + A +++D M +G +I T+N
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++ CK + +D G+ L +K+ +G+ D TYN L+ G C+ G++ A+E+FQ++ +
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
N TY +++GLC G ++AL + K+E + D + II + + D A
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 527
Score = 134 bits (338), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 133/237 (56%)
Query: 8 QGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNE 67
+G+ N+ T + +++ +C ++ A + + ++G P+ +++S +INGLC V+E
Sbjct: 117 KGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSE 176
Query: 68 ALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 127
AL L+ +M P+ IT N+L++GLC +GK + A L+D+M G + +TY L+
Sbjct: 177 ALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLN 236
Query: 128 ALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
+CK + L++K+ ++ I+ D Y+I++DGLCK G + +A +F ++ KG
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITT 296
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
N TYN +I G C G +D+ L+ M + +TF +I + ++G+ +AE
Sbjct: 297 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353
Score = 128 bits (321), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 122/230 (53%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNL 71
P V+ ++ L + + A+ M G+ ++ + SIMIN C+ + + A +
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 72 LKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 131
+ ++ PNTIT+++LI+GLC G+VS A EL+D M G D+IT N+ ++ LC
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 132 GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT 191
+ + LI K+++ G QP+ TY +L+ +CK G+ A E+ + + ++ L+
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 192 YNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
Y+ +I+GLCK G D A L ++ME G + IT+ +I G D
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWD 315
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 113/209 (54%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M +GV + VTYN+L+ G+C + ++N A+ +F M V P++++Y I+++GLC
Sbjct: 429 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 488
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+AL + +++ K+ + YN +I G+C KV +AW+L + ++G + TYN
Sbjct: 489 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 548
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ LCK + + L +K+ + G PD TYNIL+ G + ++ ++L + G
Sbjct: 549 MIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCG 608
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMS 213
++++ T +I+ L L L ++S
Sbjct: 609 FSVDASTIKMVIDMLSDGRLKKSFLDMLS 637
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 108/215 (50%)
Query: 29 EVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYN 88
+ + A +F M P V+ +S + + + K K + L L KQM + I N T +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 89 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDK 148
+I+ C+ K+ A+ + ++ G + IT+++ ++ LC V + + L+ ++++
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 149 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 208
G +PD+ T N L++GLC G+ +A + + + G N TY ++N +CK G A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 209 LTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ L+ KME+ D + + II L + G D A
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNA 282
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 105/195 (53%), Gaps = 2/195 (1%)
Query: 50 LSYSIMI-NGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLD 108
LSY + +GL +K ++A++L + M + +P I ++ L + KT + L
Sbjct: 54 LSYRERLRSGLVDIK-ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCK 112
Query: 109 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCG 168
+M ++G ++ T + ++ C+ + + + K+I G +P+ T++ L++GLC G
Sbjct: 113 QMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEG 172
Query: 169 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFE 228
R+ +A E+ + + G+ + T NT++NGLC G EA+ L+ KM + GC + +T+
Sbjct: 173 RVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYG 232
Query: 229 TIISALFEKGENDKA 243
+++ + + G+ A
Sbjct: 233 PVLNVMCKSGQTALA 247
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 176 bits (446), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 143/239 (59%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+++G+ P+ VTY SL+DG+C N+++KA + + M G P++ +++I+ING CK +
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANL 402
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+++ L L ++M ++ +T+TYN+LI G C+ GK+ A EL EM R DI++Y
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
LD LC +K + + +K+ ++ D+ YNI++ G+C ++ DA ++F L KG
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ TYN MI GLCK+G EA L KME++G + T+ +I A +G+ K+
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKS 581
Score = 154 bits (388), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 135/229 (58%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ G KP ++T N+L++G CL +V+ A + + M + G P+ ++Y ++ +CK
Sbjct: 168 MVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQ 227
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
A+ LL++M KI + + Y+ +IDGLCK G + NA+ L +EM ++G ADII Y +
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTT 287
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ C D G L++ +I + I PD+ ++ L+D K G++++A+E+ +++ ++G
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
+ + TY ++I+G CKE D+A ++ M GC + TF +I+
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILING 396
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 139/244 (56%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M+K+ + P+VV +++L+D + ++ +A+ + M Q G+ PD ++Y+ +I+G C
Sbjct: 304 LLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFC 363
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K +++A ++L M S+ PN T+N LI+G CK + + EL +M +RG AD +
Sbjct: 364 KENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTV 423
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN+ + C+ ++ L ++++ + ++PD+ +Y ILLDGLC G + A E+F+ +
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
K L+ YN +I+G+C D+A L + G D T+ +I L +KG
Sbjct: 484 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSL 543
Query: 241 DKAE 244
+A+
Sbjct: 544 SEAD 547
Score = 148 bits (374), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 132/243 (54%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M ++ +K + V Y+ ++DG C ++ A +FN M G D++ Y+ +I G C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++ LL+ M KI P+ + +++LID K GK+ A EL EM RG D +
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY S +D CK + +DK ++ ++ KG P++ T+NIL++G CK I D E+F+ +
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+G + TYNT+I G C+ G + A L +M D ++++ ++ L + GE
Sbjct: 414 SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEP 473
Query: 241 DKA 243
+KA
Sbjct: 474 EKA 476
Score = 141 bits (356), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 124/240 (51%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ G +PN VTY ++ C + A + M + + D + YSI+I+GLCK
Sbjct: 203 MVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS 262
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++ A NL +M + + I Y +LI G C G+ + +LL +M R D++ +++
Sbjct: 263 LDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSA 322
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D K + + L K++I +GI PD TY L+DG CK ++ A + + KG
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
N T+N +ING CK L D+ L L KM G + D +T+ T+I E G+ + A+
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 129/236 (54%)
Query: 8 QGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNE 67
+G K +++ Y +L+ G+C + + M + + PDV+++S +I+ K + E
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 68 ALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 127
A L K+M I P+T+TY SLIDG CK ++ A +LD M +G +I T+N ++
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Query: 128 ALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
CK + +D G+ L +K+ +G+ D TYN L+ G C+ G+++ A+E+FQ++ +
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ +Y +++GLC G ++AL + K+E + D + II + + D A
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 511
Score = 134 bits (337), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 129/237 (54%)
Query: 8 QGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNE 67
+G+ N+ T + +++ C +++ A + + ++G PD +++S +INGLC V+E
Sbjct: 101 KGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSE 160
Query: 68 ALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 127
AL L+ +M P IT N+L++GLC GKVS+A L+D M G + +TY L
Sbjct: 161 ALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLK 220
Query: 128 ALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
+CK + L++K+ ++ I+ D Y+I++DGLCK G + +A +F ++ KG+
Sbjct: 221 VMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 280
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ Y T+I G C G +D+ L+ M D + F +I ++G+ +AE
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 128/240 (53%), Gaps = 6/240 (2%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQM---GVFPDVLSYSIMINGLCK 61
M + +P ++ ++ L + +V + V + QM G+ ++ + SIMIN C+
Sbjct: 63 MTRSRPRPRLIDFSRL---FSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCR 119
Query: 62 MKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 121
+ ++ A + + ++ P+T+T+++LI+GLC G+VS A EL+D M G +IT
Sbjct: 120 CRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLIT 179
Query: 122 YNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF 181
N+ ++ LC V + LI ++++ G QP+ TY +L +CK G+ A E+ + +
Sbjct: 180 LNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKME 239
Query: 182 KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
++ L+ Y+ +I+GLCK+G D A L ++ME G D I + T+I G D
Sbjct: 240 ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWD 299
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 114/209 (54%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M +GV + VTYN+L+ G+C + ++ A+ +F M V PD++SY I+++GLC
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGE 472
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+AL + +++ K+ + YN +I G+C KV +AW+L + ++G D+ TYN
Sbjct: 473 PEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNI 532
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ LCK + + L +K+ + G P+ CTYNIL+ G + ++ +++ + G
Sbjct: 533 MIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCG 592
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMS 213
++++ T +++ L L L ++S
Sbjct: 593 FSVDASTVKMVVDMLSDGRLKKSFLDMLS 621
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 117/233 (50%), Gaps = 1/233 (0%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALN 70
K V L G + E + A +F MT+ P ++ +S + + + + K + L+
Sbjct: 35 KGKVSYRERLRSGIVDIKE-DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLD 93
Query: 71 LLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 130
L KQM + I N T + +I+ C+ K+S A+ + ++ G D +T+++ ++ LC
Sbjct: 94 LCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLC 153
Query: 131 KGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 190
V + + L+ ++++ G +P + T N L++GLC G++ DA + + + G+ N
Sbjct: 154 LEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEV 213
Query: 191 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
TY ++ +CK G A+ L+ KME+ D + + II L + G D A
Sbjct: 214 TYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNA 266
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 174 bits (442), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 142/239 (59%), Gaps = 2/239 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+K+ + P++ TYNSL++G+C+ + ++KA+ +F M FPDV++Y+ +I G CK K
Sbjct: 356 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 415
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V + L ++M ++ +T+TY +LI GL G NA ++ +M G P DI+TY+
Sbjct: 416 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 475
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
LD LC ++K + + + I+ D+ Y +++G+CK G++ D ++F L KG
Sbjct: 476 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 535
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
N TYNTMI+GLC + L EA L+ KM+++G + + T+ T+I A G DKA
Sbjct: 536 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG--DKA 592
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 140/244 (57%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L MMK G +P++VT +SL++GYC ++ A A+ + M +MG PD ++++ +I+GL
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+EA+ L+ +M PN +TY +++GLCK G A LL++M AD++
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVV 261
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
+N+ +D+LCK HVD + L K++ KGI+P++ TY+ L+ LC GR DA ++ D+
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 321
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+K N N T+N +I+ KEG F EA L M D T+ ++++
Sbjct: 322 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 381
Query: 241 DKAE 244
DKA+
Sbjct: 382 DKAK 385
Score = 161 bits (407), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 137/237 (57%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L+ M+++ + PN+VT+N+L+D + + +A+ +++ M + + PD+ +Y+ ++NG C
Sbjct: 317 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 376
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+++A + + M S+ P+ +TYN+LI G CK+ +V + EL EM RG D +
Sbjct: 377 MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 436
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY + + L D + K+++ G+ PD+ TY+ILLDGLC G+++ A EVF +
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK 237
K L+ + Y TMI G+CK G D+ L + G + +T+ T+IS L K
Sbjct: 497 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 553
Score = 159 bits (402), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 140/240 (58%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+++G +PN+VTY +++G C + + A + N M + DV+ ++ +I+ LCK +
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 275
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V++ALNL K+M ++ I PN +TY+SLI LC G+ S+A +LL +M + +++T+N+
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 335
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+DA K + L +I + I PD+ TYN L++G C R+ A+++F+ + K
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 395
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ TYNT+I G CK ++ L +M G + D +T+ T+I LF G+ D A+
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 455
Score = 157 bits (398), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 134/230 (58%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ G +P+ +T+ +L+ G L N+ ++A A+ + M Q G P++++Y +++NGLCK
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ ALNLL +M + KI + + +N++ID LCK V +A L EM +G +++TY+S
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ LC L+ +I+K I P++ T+N L+D K G+ +A++++ D+ K+
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
+ + +TYN+++NG C D+A + M C D +T+ T+I
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 410
Score = 150 bits (379), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 133/243 (54%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M ++ +VV +N+++D C V+ A +F M G+ P+V++YS +I+ LC
Sbjct: 247 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 306
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++A LL M +KI PN +T+N+LID K GK A +L D+M R DI
Sbjct: 307 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF 366
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYNS ++ C +DK + + ++ K PD+ TYN L+ G CK R++D E+F+++
Sbjct: 367 TYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM 426
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+G + TY T+I GL +G D A + +M +G D +T+ ++ L G+
Sbjct: 427 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 486
Query: 241 DKA 243
+KA
Sbjct: 487 EKA 489
Score = 131 bits (330), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 127/243 (52%), Gaps = 1/243 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M M+ + P+VVTYN+L+ G+C V +F M+ G+ D ++Y+ +I GL
Sbjct: 387 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 446
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ A + KQM S+ + P+ +TY+ L+DGLC GK+ A E+ D M DI
Sbjct: 447 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 506
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
Y + ++ +CK VD G L + KG++P++ TYN ++ GLC +++A + + +
Sbjct: 507 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 566
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+ G N+ TYNT+I ++G + L+ +M + D T +++ + G
Sbjct: 567 KEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI-GLVANMLHDGRL 625
Query: 241 DKA 243
DK+
Sbjct: 626 DKS 628
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 125/235 (53%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+K P++V +N L+ + + + ++ M ++ + + +Y+I+IN C+
Sbjct: 76 MVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQ 135
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++ AL LL +M P+ +T +SL++G C ++S+A L+D+M G D IT+ +
Sbjct: 136 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 195
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ L + + +AL+ +++ +G QP++ TY ++++GLCK G A + +
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAK 255
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
+ +NT+I+ LCK D+AL L +ME G + +T+ ++IS L G
Sbjct: 256 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 310
Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 114/215 (53%)
Query: 29 EVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYN 88
+++ A +F M + P ++ ++ +++ + KMK + ++L ++M +I+ TYN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 89 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDK 148
LI+ C+ ++S A LL +M G I+T +S L+ C G + +AL+ ++++
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 149 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 208
G +PD T+ L+ GL + +A + + ++G N TY ++NGLCK G D A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 209 LTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
L L++KME D + F TII +L + D A
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 279
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 174 bits (441), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 90/240 (37%), Positives = 133/240 (55%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
V+ +G+ P+V T+NSL+ G CL A +F M G PD +Y+++I+ LC
Sbjct: 390 VLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKG 449
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
++EALN+LKQM + ITYN+LIDG CK K A E+ DEM V G + +TYN
Sbjct: 450 KLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYN 509
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ +D LCK V+ L+ ++I +G +PD TYN LL C+ G IK A ++ Q +
Sbjct: 510 TLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSN 569
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
G + TY T+I+GLCK G + A L+ ++ G P + +I LF K + +A
Sbjct: 570 GCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEA 629
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 139/241 (57%), Gaps = 1/241 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMT-QMGVFPDVLSYSIMINGLCKMK 63
M++ G + V+ N ++ G+C V A M+ Q G FPD +++ ++NGLCK
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
V A+ ++ M E P+ TYNS+I GLCK G+V A E+LD+M R + +TYN
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ + LCK + V++ L + + KGI PD+CT+N L+ GLC + A E+F+++ K
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
G + +TYN +I+ LC +G DEAL ++ +ME +GC IT+ T+I + + +A
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 244 E 244
E
Sbjct: 490 E 490
Score = 168 bits (425), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 142/243 (58%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
++ VM+++G P+V TYNS++ G C + EV +A V + M P+ ++Y+ +I+ LC
Sbjct: 317 IMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLC 376
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K V EA L + + S+ I+P+ T+NSLI GLC T A EL +EM +G D
Sbjct: 377 KENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEF 436
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN +D+LC +D+ + ++K++ G + TYN L+DG CK + ++A+E+F ++
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM 496
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
G + N+ TYNT+I+GLCK ++A LM +M G D T+ ++++ G+
Sbjct: 497 EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDI 556
Query: 241 DKA 243
KA
Sbjct: 557 KKA 559
Score = 164 bits (415), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 135/243 (55%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M+ + PN VTYN+L+ C N+V +A + +T G+ PDV +++ +I GLC
Sbjct: 352 VLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 411
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ A+ L ++M S+ P+ TYN LID LC GK+ A +L +M + G +I
Sbjct: 412 LTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVI 471
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN+ +D CK + + + ++ G+ + TYN L+DGLCK R++DA ++ +
Sbjct: 472 TYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+G + +TYN+++ C+ G +A ++ M NGC D +T+ T+IS L + G
Sbjct: 532 IMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRV 591
Query: 241 DKA 243
+ A
Sbjct: 592 EVA 594
Score = 154 bits (388), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 129/228 (56%)
Query: 7 KQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVN 66
+ G P+ T+N+L++G C V A + + M Q G PDV +Y+ +I+GLCK+ V
Sbjct: 288 QDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVK 347
Query: 67 EALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 126
EA+ +L QM + PNT+TYN+LI LCK +V A EL + +G D+ T+NS +
Sbjct: 348 EAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 407
Query: 127 DALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 186
LC + + L +++ KG +PD TYN+L+D LC G++ +A + + + G
Sbjct: 408 QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467
Query: 187 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
+ TYNT+I+G CK EA + +ME +G + +T+ T+I L
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGL 515
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 133/236 (56%), Gaps = 1/236 (0%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G+KP+ YN +++ N + + M+ G+ PDV +++++I LC+ + A
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPA 208
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
+ +L+ M S ++P+ T+ +++ G + G + A + ++M G ++ N +
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHG 268
Query: 129 LCKGHHVDKGIALIKKVIDK-GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
CK V+ + I+++ ++ G PD T+N L++GLCK G +K A E+ + ++GY+
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ +TYN++I+GLCK G EA+ ++ +M C + +T+ T+IS L ++ + ++A
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 121/225 (53%), Gaps = 2/225 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
ML M G +V+TYN+L+DG+C N+ +A+ +F+ M GV + ++Y+ +I+GLC
Sbjct: 457 MLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLC 516
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + V +A L+ QM E P+ TYNSL+ C+ G + A +++ M G DI+
Sbjct: 517 KSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIV 576
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY + + LCK V+ L++ + KGI YN ++ GL + + +A +F+++
Sbjct: 577 TYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREM 636
Query: 181 FKKGYNLNNW-TYNTMINGLCK-EGLFDEALTLMSKMEDNGCIHD 223
++ + +Y + GLC G EA+ + ++ + G + +
Sbjct: 637 LEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPE 681
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 4/216 (1%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ +G KP+ TYNSL+ +C ++ KA + MT G PD+++Y +I+GLCK
Sbjct: 531 MIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGR 590
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQ-PADIITYN 123
V A LL+ + + I YN +I GL + K + A L EM + + P D ++Y
Sbjct: 591 VEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYR 650
Query: 124 SFLDALCKGH-HVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 182
LC G + + + + ++++KG P+ + +L +GL + ++ + +
Sbjct: 651 IVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQ 710
Query: 183 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDN 218
K +M+ GL K F +AL + + D+
Sbjct: 711 KARFSEEEV--SMVKGLLKIRKFQDALATLGGVLDS 744
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 104/195 (53%), Gaps = 12/195 (6%)
Query: 51 SYSIMINGLCKMKMVNEALNLLKQMHSE-KIIPNTITYNS----LIDG-LCKTGKVSNAW 104
++ I+I + ++ +E L+++ M E + P+T YN L+DG K ++S+A
Sbjct: 120 TFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHA- 178
Query: 105 ELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGL 164
+M V G D+ T+N + ALC+ H + I +++ + G+ PD T+ ++ G
Sbjct: 179 ----KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGY 234
Query: 165 CKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMED-NGCIHD 223
+ G + A + + + + G + +N + N +++G CKEG ++AL + +M + +G D
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294
Query: 224 PITFETIISALFEKG 238
TF T+++ L + G
Sbjct: 295 QYTFNTLVNGLCKAG 309
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 174 bits (440), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 146/239 (61%), Gaps = 2/239 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+K+ + P++ TY+SL++G+C+ + +++A+ +F M FP+V++Y+ +I G CK K
Sbjct: 352 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 411
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V+E + L ++M ++ NT+TY +LI G + + NA + +M G DI+TY+
Sbjct: 412 VDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSI 471
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
LD LC V+ + + + + ++PD+ TYNI+++G+CK G+++D ++F L KG
Sbjct: 472 LLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 531
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
N TY TM++G C++GL +EA L +M++ G + D T+ T+I A G DKA
Sbjct: 532 VKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDG--DKA 588
Score = 164 bits (415), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 141/244 (57%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L+ M+++ + PNVVT+++L+D + ++ +A+ +++ M + + PD+ +YS +ING C
Sbjct: 313 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 372
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++EA ++ + M S+ PN +TYN+LI G CK +V EL EM RG + +
Sbjct: 373 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV 432
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY + + + D + K+++ G+ PD+ TY+ILLDGLC G+++ A VF+ L
Sbjct: 433 TYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYL 492
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+ + +TYN MI G+CK G ++ L + G + +T+ T++S KG
Sbjct: 493 QRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLK 552
Query: 241 DKAE 244
++A+
Sbjct: 553 EEAD 556
Score = 159 bits (402), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 140/240 (58%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ +G +P++VTY +++G C +++ A ++ M Q + P V+ Y+ +I+ LC K
Sbjct: 212 MVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKN 271
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
VN+ALNL +M ++ I PN +TYNSLI LC G+ S+A LL +M R +++T+++
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+DA K + + L ++I + I PD+ TY+ L++G C R+ +A+ +F+ + K
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
N TYNT+I G CK DE + L +M G + + +T+ T+I F+ E D A+
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQ 451
Score = 150 bits (378), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 143/269 (53%), Gaps = 35/269 (13%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQM--------------GVF 46
+LA MMK G +P++VT NSL++G+C N ++ A ++ M +M G+F
Sbjct: 138 VLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLF 197
Query: 47 ---------------------PDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTI 85
PD+++Y I++NGLCK ++ AL+LLK+M KI P +
Sbjct: 198 RHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVV 257
Query: 86 TYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKV 145
YN++ID LC V++A L EM +G +++TYNS + LC L+ +
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317
Query: 146 IDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLF 205
I++ I P++ T++ L+D K G++ +A++++ ++ K+ + + +TY+++ING C
Sbjct: 318 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377
Query: 206 DEALTLMSKMEDNGCIHDPITFETIISAL 234
DEA + M C + +T+ T+I
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGF 406
Score = 148 bits (373), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 132/239 (55%), Gaps = 1/239 (0%)
Query: 6 MKQG-VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+QG ++P VV YN+++D C VN A +F M G+ P+V++Y+ +I LC
Sbjct: 247 MEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 306
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++A LL M KI PN +T+++LID K GK+ A +L DEM R DI TY+S
Sbjct: 307 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 366
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++ C +D+ + + +I K P++ TYN L+ G CK R+ + E+F+++ ++G
Sbjct: 367 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRG 426
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
N TY T+I+G + D A + +M +G + D +T+ ++ L G+ + A
Sbjct: 427 LVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETA 485
Score = 144 bits (364), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 138/240 (57%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M G+ N+ TY+ L++ +C ++++ A AV M ++G PD+++ + ++NG C
Sbjct: 107 MQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNR 166
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+++A++L+ QM P++ T+N+LI GL + + S A L+D M V+G D++TY
Sbjct: 167 ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGI 226
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++ LCK +D ++L+KK+ I+P + YN ++D LC + DA +F ++ KG
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
N TYN++I LC G + +A L+S M + + +TF +I A ++G+ +AE
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 346
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 136/243 (55%), Gaps = 1/243 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M +M+ + PNVVTYN+L+ G+C V++ +F M+Q G+ + ++Y+ +I+G
Sbjct: 383 MFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFF 442
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + + A + KQM S+ ++P+ +TY+ L+DGLC GKV A + + + DI
Sbjct: 443 QARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIY 502
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN ++ +CK V+ G L + KG++P++ TY ++ G C+ G ++A +F+++
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREM 562
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
++G ++ TYNT+I ++G + L+ +M + D T +++ + G
Sbjct: 563 KEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI-GLVTNMLHDGRL 621
Query: 241 DKA 243
DK+
Sbjct: 622 DKS 624
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 129/235 (54%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+K P++V ++ L+ +N+ + ++ M +G+ ++ +YSI+IN C+
Sbjct: 72 MVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQ 131
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++ AL +L +M P+ +T NSL++G C ++S+A L+ +M G D T+N+
Sbjct: 132 LSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNT 191
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ L + + + +AL+ +++ KG QPD+ TY I+++GLCK G I A + + + +
Sbjct: 192 LIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGK 251
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
YNT+I+ LC ++AL L ++M++ G + +T+ ++I L G
Sbjct: 252 IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 306
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 113/206 (54%)
Query: 29 EVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYN 88
+++ A +F M + FP ++ +S +++ + KM + ++L +QM + I N TY+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 89 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDK 148
LI+ C+ ++S A +L +M G DI+T NS L+ C G+ + ++L+ ++++
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 149 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 208
G QPD T+N L+ GL + R +A + + KG + TY ++NGLCK G D A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 209 LTLMSKMEDNGCIHDPITFETIISAL 234
L+L+ KME + + TII AL
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDAL 266
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 104/190 (54%), Gaps = 1/190 (0%)
Query: 54 IMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVR 113
I IN L +K+ ++A+NL M + P+ + ++ L+ + K K L ++M
Sbjct: 52 ISINRLNDLKL-DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL 110
Query: 114 GQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDA 173
G ++ TY+ ++ C+ + +A++ K++ G +PD+ T N LL+G C RI DA
Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 170
Query: 174 QEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
+ + + GY +++T+NT+I+GL + EA+ L+ +M GC D +T+ +++
Sbjct: 171 VSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNG 230
Query: 234 LFEKGENDKA 243
L ++G+ D A
Sbjct: 231 LCKRGDIDLA 240
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 174 bits (440), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 141/239 (58%), Gaps = 2/239 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+K+ + P++ TYNSL++G+C+ + ++KA+ +F M FPD+ +Y+ +I G CK K
Sbjct: 281 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKR 340
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V + L ++M ++ +T+TY +LI GL G NA ++ +M G P DI+TY+
Sbjct: 341 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 400
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
LD LC ++K + + + I+ D+ Y +++G+CK G++ D ++F L KG
Sbjct: 401 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 460
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
N TYNTMI+GLC + L EA L+ KM+++G + D T+ T+I A G DKA
Sbjct: 461 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG--DKA 517
Score = 167 bits (423), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 142/244 (58%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L MMK G +P++VT +SL++GYC ++ A A+ + M +MG PD ++++ +I+GL
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+EA+ L+ +M PN +TY +++GLCK G + A+ LL++M AD++
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
+N+ +D+LCK HVD + L K++ KGI+P++ TY+ L+ LC GR DA ++ D+
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+K N N T+N +I+ KEG F EA L M D T+ ++I+
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306
Query: 241 DKAE 244
DKA+
Sbjct: 307 DKAK 310
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 141/240 (58%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+++G +PN+VTY +++G C +++ A + N M + DV+ ++ +I+ LCK +
Sbjct: 141 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 200
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V++ALNL K+M ++ I PN +TY+SLI LC G+ S+A +LL +M + +++T+N+
Sbjct: 201 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 260
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+DA K + L +I + I PD+ TYN L++G C R+ A+++F+ + K
Sbjct: 261 LIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD 320
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ TYNT+I G CK ++ L +M G + D +T+ T+I LF G+ D A+
Sbjct: 321 CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 380
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 133/243 (54%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M ++ +VV +N+++D C V+ A +F M G+ P+V++YS +I+ LC
Sbjct: 172 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 231
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++A LL M +KI PN +T+N+LID K GK A +L D+M R DI
Sbjct: 232 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIF 291
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYNS ++ C +DK + + ++ K PD+ TYN L+ G CK R++D E+F+++
Sbjct: 292 TYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM 351
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+G + TY T+I GL +G D A + +M +G D +T+ ++ L G+
Sbjct: 352 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 411
Query: 241 DKA 243
+KA
Sbjct: 412 EKA 414
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 127/235 (54%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+K P++ +N L+ + + + ++ M ++G+ ++ +Y+I+IN C+
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++ AL LL +M P+ +T +SL++G C ++S+A L+D+M G D IT+ +
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ L + + +AL+ +++ +G QP++ TY ++++GLCK G I A + +
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
+ +NT+I+ LCK D+AL L +ME G + +T+ ++IS L G
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 235
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 105/204 (51%)
Query: 40 MTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGK 99
M + P + ++ +++ + KMK + ++L ++M I N TYN LI+ C+ +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 100 VSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNI 159
+S A LL +M G I+T +S L+ C G + +AL+ ++++ G +PD T+
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 160 LLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 219
L+ GL + +A + + ++G N TY ++NGLCK G D A L++KME
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 220 CIHDPITFETIISALFEKGENDKA 243
D + F TII +L + D A
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDA 204
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 151/244 (61%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M A M++ G+ P+V+TY SL+ C +N+A + M G+ P+ +Y+ +++G
Sbjct: 332 MHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFS 391
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ +NEA +L++M+ P+ +TYN+LI+G C TGK+ +A +L++M +G D++
Sbjct: 392 QKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVV 451
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
+Y++ L C+ + VD+ + + +++++KGI+PD TY+ L+ G C+ R K+A ++++++
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 511
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+ G + +TY +IN C EG ++AL L ++M + G + D +T+ +I+ L ++
Sbjct: 512 LRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRT 571
Query: 241 DKAE 244
+A+
Sbjct: 572 REAK 575
Score = 158 bits (399), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 130/227 (57%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ V PNV TYN L+ G+C ++ A +F+ M G P+V++Y+ +I+G CK++
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+++ LL+ M + + PN I+YN +I+GLC+ G++ +L EM+ RG D +TYN+
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ CK + + + + +++ G+ P + TY L+ +CK G + A E + +G
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 231
N TY T+++G ++G +EA ++ +M DNG +T+ +I
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI 422
Score = 158 bits (399), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 139/228 (60%), Gaps = 1/228 (0%)
Query: 17 YNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM-VNEALNLLKQM 75
++ ++ Y ++ ++KA ++ + G P VLSY+ +++ + K ++ A N+ K+M
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 76 HSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHV 135
++ PN TYN LI G C G + A L D+M +G +++TYN+ +D CK +
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 136 DKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTM 195
D G L++ + KG++P++ +YN++++GLC+ GR+K+ V ++ ++GY+L+ TYNT+
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 196 INGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
I G CKEG F +AL + ++M +G IT+ ++I ++ + G ++A
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRA 364
Score = 154 bits (388), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 148/274 (54%), Gaps = 35/274 (12%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC---K 61
M +G PNVVTYN+L+DGYC + +++ + +M G+ P+++SY+++INGLC +
Sbjct: 231 METKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGR 290
Query: 62 MKMV--------------------------------NEALNLLKQMHSEKIIPNTITYNS 89
MK V ++AL + +M + P+ ITY S
Sbjct: 291 MKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTS 350
Query: 90 LIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKG 149
LI +CK G ++ A E LD+M VRG + TY + +D + ++++ +++++ D G
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410
Query: 150 IQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEAL 209
P + TYN L++G C G+++DA V +D+ +KG + + +Y+T+++G C+ DEAL
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 210 TLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ +M + G D IT+ ++I E+ +A
Sbjct: 471 RVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEA 504
Score = 151 bits (381), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 148/289 (51%), Gaps = 50/289 (17%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M G P+VVTYN+L++G+C+ ++ A AV M + G+ PDV+SYS +++G C
Sbjct: 402 VLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC 461
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ V+EAL + ++M + I P+TITY+SLI G C+ + A +L +EM G P D
Sbjct: 462 RSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEF 521
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQ------ 174
TY + ++A C ++K + L ++++KG+ PD+ TY++L++GL K R ++A+
Sbjct: 522 TYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581
Query: 175 --------------------------------------------EVFQDLFKKGYNLNNW 190
+VF+ + K + +
Sbjct: 582 FYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGT 641
Query: 191 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
YN MI+G C+ G +A TL +M +G + +T ++ AL ++G+
Sbjct: 642 AYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGK 690
Score = 137 bits (344), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 130/237 (54%), Gaps = 1/237 (0%)
Query: 8 QGVKPNVVTYNSLMDGYCLVNE-VNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVN 66
G P V++YN+++D ++ A+ VF M + V P+V +Y+I+I G C ++
Sbjct: 163 HGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNID 222
Query: 67 EALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 126
AL L +M ++ +PN +TYN+LIDG CK K+ + ++LL M ++G ++I+YN +
Sbjct: 223 VALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVI 282
Query: 127 DALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 186
+ LC+ + + ++ ++ +G D TYN L+ G CK G A + ++ + G
Sbjct: 283 NGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLT 342
Query: 187 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ TY ++I+ +CK G + A+ + +M G + T+ T++ +KG ++A
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 399
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 115/219 (52%), Gaps = 17/219 (7%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+++G+KP+ +TY+SL+ G+C +A ++ M ++G+ PD +Y+ +IN C
Sbjct: 476 MVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGD 535
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ +AL L +M + ++P+ +TY+ LI+GL K + A LL ++ +TY++
Sbjct: 536 LEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHT 595
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGI----------------QPDMCTYNILLDGLCKCG 168
++ C ++LIK KG+ +PD YNI++ G C+ G
Sbjct: 596 LIEN-CSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAG 654
Query: 169 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDE 207
I+ A +++++ K G+ L+ T ++ L KEG +E
Sbjct: 655 DIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 99/231 (42%), Gaps = 50/231 (21%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ G+ P+ TY +L++ YC+ ++ KA + N M + GV PDV++YS++INGL K
Sbjct: 511 MLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSR 570
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLI--------------------------------- 91
EA LL ++ E+ +P+ +TY++LI
Sbjct: 571 TREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFES 630
Query: 92 -----------------DGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 134
G C+ G + A+ L EM G +T + + AL K
Sbjct: 631 MLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGK 690
Query: 135 VDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 185
V++ ++I V+ + +L++ + G + +V ++ K G+
Sbjct: 691 VNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGF 741
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 145/243 (59%), Gaps = 3/243 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L ++ G P+V+TYN ++ GYC E+N A +V + +M V PDV++Y+ ++ LC
Sbjct: 159 ILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLD---RMSVSPDVVTYNTILRSLC 215
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ +A+ +L +M P+ ITY LI+ C+ V +A +LLDEM RG D++
Sbjct: 216 DSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVV 275
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN ++ +CK +D+ I + + G QP++ T+NI+L +C GR DA+++ D+
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM 335
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+KG++ + T+N +IN LC++GL A+ ++ KM +GC + +++ ++ ++ +
Sbjct: 336 LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKM 395
Query: 241 DKA 243
D+A
Sbjct: 396 DRA 398
Score = 161 bits (407), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 140/242 (57%)
Query: 2 LAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCK 61
L+V+ + V P+VVTYN+++ C ++ +A V + M Q +PDV++Y+I+I C+
Sbjct: 192 LSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 251
Query: 62 MKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 121
V A+ LL +M P+ +TYN L++G+CK G++ A + L++M G ++IT
Sbjct: 252 DSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVIT 311
Query: 122 YNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF 181
+N L ++C L+ ++ KG P + T+NIL++ LC+ G + A ++ + +
Sbjct: 312 HNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP 371
Query: 182 KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
+ G N+ +YN +++G CKE D A+ + +M GC D +T+ T+++AL + G+ +
Sbjct: 372 QHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVE 431
Query: 242 KA 243
A
Sbjct: 432 DA 433
Score = 157 bits (398), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 135/239 (56%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M G +PNV+T+N ++ C A+ + M + G P V++++I+IN LC+ +
Sbjct: 300 MPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGL 359
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ A+++L++M PN+++YN L+ G CK K+ A E L+ M RG DI+TYN+
Sbjct: 360 LGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 419
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
L ALCK V+ + ++ ++ KG P + TYN ++DGL K G+ A ++ ++ K
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ TY++++ GL +EG DEA+ + E G + +TF +I+ L + + D+A
Sbjct: 480 LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRA 538
Score = 155 bits (392), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 141/243 (58%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M+++ P+V+TY L++ C + V A + + M G PDV++Y++++NG+C
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K ++EA+ L M S PN IT+N ++ +C TG+ +A +LL +M +G ++
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
T+N ++ LC+ + + I +++K+ G QP+ +YN LL G CK ++ A E + +
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+G + TYNTM+ LCK+G ++A+ +++++ GC IT+ T+I L + G+
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465
Query: 241 DKA 243
KA
Sbjct: 466 GKA 468
Score = 154 bits (390), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 141/243 (58%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+LA M+++G P+VVT+N L++ C + +A + M Q G P+ LSY+ +++G C
Sbjct: 331 LLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFC 390
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K K ++ A+ L++M S P+ +TYN+++ LCK GKV +A E+L+++ +G +I
Sbjct: 391 KEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLI 450
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN+ +D L K K I L+ ++ K ++PD TY+ L+ GL + G++ +A + F +
Sbjct: 451 TYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEF 510
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+ G N T+N+++ GLCK D A+ + M + GC + ++ +I L +G
Sbjct: 511 ERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMA 570
Query: 241 DKA 243
+A
Sbjct: 571 KEA 573
Score = 153 bits (387), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 138/243 (56%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M +G P+VVTYN L++G C +++A N M G P+V++++I++ +C
Sbjct: 261 LLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC 320
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+A LL M + P+ +T+N LI+ LC+ G + A ++L++M G + +
Sbjct: 321 STGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSL 380
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
+YN L CK +D+ I +++++ +G PD+ TYN +L LCK G+++DA E+ L
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
KG + TYNT+I+GL K G +A+ L+ +M D IT+ +++ L +G+
Sbjct: 441 SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKV 500
Query: 241 DKA 243
D+A
Sbjct: 501 DEA 503
Score = 147 bits (372), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 123/219 (56%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M + G +PN ++YN L+ G+C ++++A M G +PD+++Y+ M+ LC
Sbjct: 366 ILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALC 425
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K V +A+ +L Q+ S+ P ITYN++IDGL K GK A +LLDEM + D I
Sbjct: 426 KDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTI 485
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY+S + L + VD+ I + GI+P+ T+N ++ GLCK + A + +
Sbjct: 486 TYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFM 545
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 219
+G N +Y +I GL EG+ EAL L++++ + G
Sbjct: 546 INRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Score = 133 bits (335), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 117/216 (54%), Gaps = 3/216 (1%)
Query: 29 EVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYN 88
E+ + M G PD++ + +I G C++ +A +L+ + +P+ ITYN
Sbjct: 117 ELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYN 176
Query: 89 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDK 148
+I G CK G+++NA +LD M V D++TYN+ L +LC + + + ++ +++ +
Sbjct: 177 VMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR 233
Query: 149 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 208
PD+ TY IL++ C+ + A ++ ++ +G + TYN ++NG+CKEG DEA
Sbjct: 234 DCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEA 293
Query: 209 LTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ ++ M +GC + IT I+ ++ G AE
Sbjct: 294 IKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAE 329
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 108/236 (45%), Gaps = 22/236 (9%)
Query: 14 VVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLK 73
+V+ +S +G+CL+ + ++ N + +S I + + ++V ++
Sbjct: 4 MVSTSSAQEGFCLIQQFHREYKRGNKLDVSCRTSGSISSKIPLGSRKRNRLV--LVSAAS 61
Query: 74 QMHSEKIIPNTITYNSLIDGLCKT------GKVSNAWELLDEMHVRGQPADIITYNSFLD 127
++ S + + +L G + V++++ L D + N+ L
Sbjct: 62 KVESSGLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALED-----------VESNNHLR 110
Query: 128 ALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
+ + +++G ++ ++ G PD+ L+ G C+ G+ + A ++ + L G
Sbjct: 111 QMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVP 170
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ TYN MI+G CK G + AL+++ +M + D +T+ TI+ +L + G+ +A
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQA 223
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 171 bits (432), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 137/233 (58%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L MM++G+ PN +TYNSL+DG+C N + +A + + M G PD+++++I+ING C
Sbjct: 355 LLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYC 414
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K +++ L L ++M +I NT+TYN+L+ G C++GK+ A +L EM R DI+
Sbjct: 415 KANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIV 474
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
+Y LD LC ++K + + K+ ++ D+ Y I++ G+C ++ DA ++F L
Sbjct: 475 SYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSL 534
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
KG L+ YN MI+ LC++ +A L KM + G D +T+ +I A
Sbjct: 535 PLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRA 587
Score = 169 bits (427), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 140/229 (61%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ G KP ++T N+L++G CL +V+ A + + M + G P+ ++Y ++N +CK
Sbjct: 184 MVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQ 243
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
A+ LL++M I + + Y+ +IDGLCK G + NA+ L +EM ++G ADIITYN+
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNT 303
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ C D G L++ +I + I P++ T+++L+D K G++++A ++ +++ ++G
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG 363
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
N TYN++I+G CKE +EA+ ++ M GC D +TF +I+
Sbjct: 364 IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILING 412
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 138/243 (56%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M ++ +K + V Y+ ++DG C ++ A +FN M G D+++Y+ +I G C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++ LL+ M KI PN +T++ LID K GK+ A +LL EM RG + I
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYNS +D CK + +++ I ++ +I KG PD+ T+NIL++G CK RI D E+F+++
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM 429
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+G N TYNT++ G C+ G + A L +M D ++++ ++ L + GE
Sbjct: 430 SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGEL 489
Query: 241 DKA 243
+KA
Sbjct: 490 EKA 492
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 136/236 (57%)
Query: 8 QGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNE 67
+G K +++TYN+L+ G+C + + M + + P+V+++S++I+ K + E
Sbjct: 292 KGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLRE 351
Query: 68 ALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 127
A LLK+M I PNTITYNSLIDG CK ++ A +++D M +G DI+T+N ++
Sbjct: 352 ADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILIN 411
Query: 128 ALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
CK + +D G+ L +++ +G+ + TYN L+ G C+ G+++ A+++FQ++ +
Sbjct: 412 GYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRP 471
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ +Y +++GLC G ++AL + K+E + D + II + + D A
Sbjct: 472 DIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDA 527
Score = 150 bits (380), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 136/244 (55%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M+K+ + PNVVT++ L+D + ++ +A + M Q G+ P+ ++Y+ +I+G C
Sbjct: 320 LLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFC 379
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + EA+ ++ M S+ P+ +T+N LI+G CK ++ + EL EM +RG A+ +
Sbjct: 380 KENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV 439
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN+ + C+ ++ L ++++ + ++PD+ +Y ILLDGLC G ++ A E+F +
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
K L+ Y +I+G+C D+A L + G D + +IS L K
Sbjct: 500 EKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSL 559
Query: 241 DKAE 244
KA+
Sbjct: 560 SKAD 563
Score = 144 bits (364), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 135/239 (56%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
+MK G +P+ V +N+L++G CL V++A + + M +MG P +++ + ++NGLC
Sbjct: 149 IMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGK 208
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V++A+ L+ +M PN +TY +++ +CK+G+ + A ELL +M R D + Y+
Sbjct: 209 VSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D LCK +D L ++ KG + D+ TYN L+ G C GR D ++ +D+ K+
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ N T++ +I+ KEG EA L+ +M G + IT+ ++I ++ ++A
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEA 387
Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 135/240 (56%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M +G+ ++ T + +++ +C +++ A + + ++G PD + ++ ++NGLC
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V+EAL L+ +M P IT N+L++GLC GKVS+A L+D M G + +TY
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
L+ +CK + L++K+ ++ I+ D Y+I++DGLCK G + +A +F ++ KG
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ + TYNT+I G C G +D+ L+ M + +TF +I + ++G+ +A+
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Score = 130 bits (328), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 123/237 (51%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ P V+ +N L + A+ M G+ + + SIMIN C+ +
Sbjct: 79 MIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRK 138
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++ A + + ++ P+T+ +N+L++GLC +VS A EL+D M G +IT N+
Sbjct: 139 LSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNT 198
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++ LC V + LI ++++ G QP+ TY +L+ +CK G+ A E+ + + ++
Sbjct: 199 LVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERN 258
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
L+ Y+ +I+GLCK+G D A L ++ME G D IT+ T+I G D
Sbjct: 259 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWD 315
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 127/243 (52%), Gaps = 1/243 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M+ +M+ +G P+++T+N L++GYC N ++ +F M+ GV + ++Y+ ++ G C
Sbjct: 390 MVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFC 449
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + A L ++M S ++ P+ ++Y L+DGLC G++ A E+ ++ DI
Sbjct: 450 QSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIG 509
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
Y + +C VD L + KG++ D YNI++ LC+ + A +F+ +
Sbjct: 510 IYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKM 569
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
++G+ + TYN +I + A L+ +M+ +G D T + +I+ L GE
Sbjct: 570 TEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML-SSGEL 628
Query: 241 DKA 243
DK+
Sbjct: 629 DKS 631
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 110/215 (51%)
Query: 29 EVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYN 88
+ + A +F M Q P V+ ++ + + + K K L L KQM S+ I + T +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 89 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDK 148
+I+ C+ K+S A+ + ++ G D + +N+ L+ LC V + + L+ ++++
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 149 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 208
G +P + T N L++GLC G++ DA + + + G+ N TY ++N +CK G A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 209 LTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ L+ KME+ D + + II L + G D A
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNA 282
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 169 bits (428), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 139/222 (62%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+K+ + P++ TY+SL++G+C+ + +++A+ +F M FP+V++Y+ +ING CK K
Sbjct: 356 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKR 415
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++E + L ++M ++ NT+TY +LI G + NA + +M G +I+TYN+
Sbjct: 416 IDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNT 475
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
LD LCK ++K + + + + ++P + TYNI+++G+CK G+++D ++F L KG
Sbjct: 476 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 535
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPIT 226
+ YNTMI+G C++GL +EA L KM ++G + D T
Sbjct: 536 VKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 167 bits (424), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 140/244 (57%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L+ M+++ + PNVVT+N+L+D + ++ +A+ +++ M + + PD+ +YS +ING C
Sbjct: 317 LLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 376
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++EA ++ + M S+ PN +TYN+LI+G CK ++ EL EM RG + +
Sbjct: 377 MHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTV 436
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY + + + D + K+++ G+ P++ TYN LLDGLCK G+++ A VF+ L
Sbjct: 437 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 496
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+ +TYN MI G+CK G ++ L + G D I + T+IS KG
Sbjct: 497 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLK 556
Query: 241 DKAE 244
++A+
Sbjct: 557 EEAD 560
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 140/240 (58%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+++G +PN+VTY +++G C +++ A + N M + +V+ YS +I+ LCK +
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 275
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++ALNL +M ++ + PN ITY+SLI LC + S+A LL +M R +++T+N+
Sbjct: 276 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNA 335
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+DA K + + L ++I + I PD+ TY+ L++G C R+ +A+ +F+ + K
Sbjct: 336 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 395
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
N TYNT+ING CK DE + L +M G + + +T+ T+I F+ + D A+
Sbjct: 396 CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 455
Score = 152 bits (385), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 139/244 (56%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L MMK G +P++VT +SL++GYC ++ A A+ + M +MG PD ++++ +I+GL
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+EA+ L+ +M PN +TY +++GLCK G + A+ LL++M A+++
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVV 261
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
Y++ +D+LCK H D + L ++ +KG++P++ TY+ L+ LC R DA + D+
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM 321
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
++ N N T+N +I+ KEG EA L +M D T+ ++I+
Sbjct: 322 IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 381
Query: 241 DKAE 244
D+A+
Sbjct: 382 DEAK 385
Score = 151 bits (382), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 135/230 (58%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ G +P+ +T+ +L+ G L N+ ++A A+ + M Q G P++++Y +++NGLCK
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++ A NLL +M + KI N + Y+++ID LCK +A L EM +G ++ITY+S
Sbjct: 241 IDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 300
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ LC L+ +I++ I P++ T+N L+D K G++ +A++++ ++ K+
Sbjct: 301 LISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS 360
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
+ + +TY+++ING C DEA + M C + +T+ T+I+
Sbjct: 361 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGF 410
Score = 145 bits (366), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 135/243 (55%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M ++ NVV Y++++D C + A +F M GV P+V++YS +I+ LC
Sbjct: 247 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 306
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ ++A LL M KI PN +T+N+LID K GK+ A +L DEM R DI
Sbjct: 307 NYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 366
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY+S ++ C +D+ + + +I K P++ TYN L++G CK RI + E+F+++
Sbjct: 367 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM 426
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
++G N TY T+I+G + D A + +M +G + +T+ T++ L + G+
Sbjct: 427 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 486
Query: 241 DKA 243
+KA
Sbjct: 487 EKA 489
Score = 130 bits (328), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 133/240 (55%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M + G+ N+ TYN L++ +C ++++ A A+ M ++G P +++ S ++NG C K
Sbjct: 111 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+++A+ L+ QM P+TIT+ +LI GL K S A L+D M RG +++TY
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++ LCK +D L+ K+ I+ ++ Y+ ++D LCK DA +F ++ KG
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
N TY+++I+ LC + +A L+S M + + +TF +I A ++G+ +AE
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAE 350
Score = 127 bits (318), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 108/184 (58%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M +M+ + PNVVTYN+L++G+C +++ +F M+Q G+ + ++Y+ +I+G
Sbjct: 387 MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFF 446
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + + A + KQM S+ + PN +TYN+L+DGLCK GK+ A + + + I
Sbjct: 447 QARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 506
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN ++ +CK V+ G L + KG++PD+ YN ++ G C+ G ++A +F+ +
Sbjct: 507 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Query: 181 FKKG 184
+ G
Sbjct: 567 REDG 570
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 128/230 (55%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+K P++ +N L+ + + + ++ M ++G+ ++ +Y+I+IN C+
Sbjct: 76 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 135
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++ AL LL +M P+ +T +SL++G C ++S+A L+D+M G D IT+ +
Sbjct: 136 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 195
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ L + + +AL+ +++ +G QP++ TY ++++GLCK G I A + +
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 255
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
N Y+T+I+ LCK D+AL L ++ME+ G + IT+ ++IS L
Sbjct: 256 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305
Score = 110 bits (275), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 111/215 (51%)
Query: 29 EVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYN 88
+++ A +F M + P + ++ +++ + KMK + ++L ++M I N TYN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 89 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDK 148
LI+ C+ ++S A LL +M G I+T +S L+ C G + +AL+ ++++
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 149 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 208
G +PD T+ L+ GL + +A + + ++G N TY ++NGLCK G D A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 209 LTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
L++KME + + + T+I +L + D A
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 279
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 169 bits (427), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 132/216 (61%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
VM++ V P+V TY SL++G C+ +++A+ +F M + G +P+ + Y+ +I+G CK K
Sbjct: 283 VMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSK 342
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
V + + + +M + ++ NTITY LI G C G+ A E+ ++M R P DI TYN
Sbjct: 343 RVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYN 402
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
LD LC V+K + + + + + + ++ TY I++ G+CK G+++DA ++F LF K
Sbjct: 403 VLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSK 462
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 219
G N TY TMI+G C+ GL EA +L KM+++G
Sbjct: 463 GMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDG 498
Score = 160 bits (406), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 138/244 (56%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L MMK+ ++PNV+T+ +L+D + V ++ +A+ ++N M QM V+PDV +Y +INGLC
Sbjct: 245 LLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLC 304
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+++EA + M PN + Y +LI G CK+ +V + ++ EM +G A+ I
Sbjct: 305 MYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTI 364
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY + C D + ++ + PD+ TYN+LLDGLC G+++ A +F+ +
Sbjct: 365 TYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYM 424
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
K+ ++N TY +I G+CK G ++A L + G + IT+ T+IS +G
Sbjct: 425 RKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLI 484
Query: 241 DKAE 244
+A+
Sbjct: 485 HEAD 488
Score = 157 bits (396), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 139/245 (56%), Gaps = 2/245 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
L MMK G +P++VT+ SL++GYC N + A A+F+ + MG P+V++Y+ +I LC
Sbjct: 140 FLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLC 199
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSN-AWELLDEMHVRGQPADI 119
K + +N A+ L QM + PN +TYN+L+ GLC+ G+ + AW L D M R +P ++
Sbjct: 200 KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEP-NV 258
Query: 120 ITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
IT+ + +DA K + + L +I + PD+ TY L++GLC G + +A+++F
Sbjct: 259 ITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYL 318
Query: 180 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
+ + G N Y T+I+G CK ++ + + +M G + + IT+ +I G
Sbjct: 319 MERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGR 378
Query: 240 NDKAE 244
D A+
Sbjct: 379 PDVAQ 383
Score = 140 bits (353), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 125/226 (55%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G+ P + T N +M CL ++ +A M ++G PD+++++ ++NG C + +A
Sbjct: 113 GIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDA 172
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
+ L Q+ PN +TY +LI LCK +++A EL ++M G +++TYN+ +
Sbjct: 173 IALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTG 232
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
LC+ L++ ++ + I+P++ T+ L+D K G++ +A+E++ + + +
Sbjct: 233 LCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPD 292
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
+TY ++INGLC GL DEA + ME NGC + + + T+I
Sbjct: 293 VFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGF 338
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 122/239 (51%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
++ G KPNVVTY +L+ C +N A +FN M G P+V++Y+ ++ GLC++
Sbjct: 179 ILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGR 238
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+A LL+ M +I PN IT+ +LID K GK+ A EL + M D+ TY S
Sbjct: 239 WGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGS 298
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++ LC +D+ + + G P+ Y L+ G CK R++D ++F ++ +KG
Sbjct: 299 LINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKG 358
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
N TY +I G C G D A + ++M D T+ ++ L G+ +KA
Sbjct: 359 VVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKA 417
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 100/192 (52%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M +M + G PN V Y +L+ G+C V +F M+Q GV + ++Y+++I G C
Sbjct: 315 MFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYC 374
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + A + QM S + P+ TYN L+DGLC GKV A + + M R +I+
Sbjct: 375 LVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIV 434
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY + +CK V+ L + KG++P++ TY ++ G C+ G I +A +F+ +
Sbjct: 435 TYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Query: 181 FKKGYNLNNWTY 192
+ G+ N Y
Sbjct: 495 KEDGFLPNESVY 506
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 103/211 (48%)
Query: 29 EVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYN 88
+ N A +F M P ++ ++ +++ + KM + ++L +QM I P T N
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 89 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDK 148
++ +C + + A L +M G D++T+ S L+ C + ++ IAL +++
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 149 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 208
G +P++ TY L+ LCK + A E+F + G N TYN ++ GLC+ G + +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 209 LTLMSKMEDNGCIHDPITFETIISALFEKGE 239
L+ M + ITF +I A + G+
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGK 273
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 168 bits (426), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 139/235 (59%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ +G+ PN++TYN+LMDGYC+ N +++A + + M + PD+++++ +I G C +K
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V++ + + + + ++ N +TY+ L+ G C++GK+ A EL EM G D++TY
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
LD LC ++K + + + + + + Y +++G+CK G+++DA +F L KG
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 503
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
N TY MI+GLCK+G EA L+ KME++G + T+ T+I A G+
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGD 558
Score = 161 bits (407), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 141/231 (61%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L +MK G +P+ T+N+L+ G L +V++A + + M + G PDV++Y+ ++NG+C
Sbjct: 145 VLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGIC 204
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + AL+LL++M + + TY+++ID LC+ G + A L EM +G + ++
Sbjct: 205 RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV 264
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYNS + LCK + G L+K ++ + I P++ T+N+LLD K G++++A E+++++
Sbjct: 265 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 324
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 231
+G + N TYNT+++G C + EA ++ M N C D +TF ++I
Sbjct: 325 ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 135/243 (55%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M ++ VK +V TY++++D C ++ A ++F M G+ V++Y+ ++ GLC
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K N+ LLK M S +I+PN IT+N L+D K GK+ A EL EM RG +II
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN+ +D C + + + ++ ++ PD+ T+ L+ G C R+ D +VF+++
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
K+G N TY+ ++ G C+ G A L +M +G + D +T+ ++ L + G+
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454
Query: 241 DKA 243
+KA
Sbjct: 455 EKA 457
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 136/243 (55%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M+ + + PNV+T+N L+D + ++ +A ++ M G+ P++++Y+ +++G C
Sbjct: 285 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++EA N+L M K P+ +T+ SLI G C +V + ++ + RG A+ +
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY+ + C+ + L ++++ G+ PD+ TY ILLDGLC G+++ A E+F+DL
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
K +L Y T+I G+CK G ++A L + G + +T+ +IS L +KG
Sbjct: 465 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 524
Query: 241 DKA 243
+A
Sbjct: 525 SEA 527
Score = 146 bits (368), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 132/236 (55%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
ML +M++ P++VT+ SL+ GYC+V V+ VF +++ G+ + ++YSI++ G C
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + A L ++M S ++P+ +TY L+DGLC GK+ A E+ +++ I+
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
Y + ++ +CKG V+ L + KG++P++ TY +++ GLCK G + +A + + +
Sbjct: 475 MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFE 236
+ G N+ TYNT+I ++G + L+ +M+ G D + + +I L
Sbjct: 535 EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLS 590
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 132/239 (55%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M +G+K +VVTYNSL+ G C + N + M + P+V++++++++ K
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ EA L K+M + I PN ITYN+L+DG C ++S A +LD M DI+T+ S
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ C VD G+ + + + +G+ + TY+IL+ G C+ G+IK A+E+FQ++ G
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ TY +++GLC G ++AL + ++ + + + TII + + G+ + A
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDA 492
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 125/239 (52%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ P++V ++ + N + G+ ++ + +IMIN C+
Sbjct: 79 MIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCK 138
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
A ++L ++ P+T T+N+LI GL GKVS A L+D M G D++TYNS
Sbjct: 139 TCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNS 198
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++ +C+ + L++K+ ++ ++ D+ TY+ ++D LC+ G I A +F+++ KG
Sbjct: 199 IVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKG 258
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ TYN+++ GLCK G +++ L+ M + + ITF ++ ++G+ +A
Sbjct: 259 IKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 113/212 (53%), Gaps = 1/212 (0%)
Query: 33 AQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLID 92
A A+F M + P ++ +S + + + K N L+ KQ+ I N T N +I+
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131
Query: 93 GLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQP 152
C+ K A+ +L ++ G D T+N+ + L V + + L+ ++++ G QP
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191
Query: 153 DMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLM 212
D+ TYN +++G+C+ G A ++ + + ++ + +TY+T+I+ LC++G D A++L
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 213 SKMEDNGCIHDPITFETIISALFEKGE-NDKA 243
+ME G +T+ +++ L + G+ ND A
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGA 283
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 91/178 (51%)
Query: 66 NEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 125
++A+ L ++M + +P+ + ++ + +T + + + ++ + G +I T N
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 126 LDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 185
++ C+ +++ KV+ G +PD T+N L+ GL G++ +A + + + G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 186 NLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ TYN+++NG+C+ G AL L+ KME+ D T+ TII +L G D A
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 77/146 (52%), Gaps = 2/146 (1%)
Query: 99 KVSNAWELLDEMHVRGQP-ADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTY 157
K +A L EM +R +P ++ ++ F A+ + + + K++ GI ++ T
Sbjct: 68 KKDDAIALFQEM-IRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTL 126
Query: 158 NILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMED 217
NI+++ C+C + A V + K GY + T+NT+I GL EG EA+ L+ +M +
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186
Query: 218 NGCIHDPITFETIISALFEKGENDKA 243
NGC D +T+ +I++ + G+ A
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLA 212
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 168 bits (425), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 131/215 (60%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+++ + P++VTY+ L+ G C+ + +++A+ +F M G FPDV++YSI+ING CK K
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V + L +M ++ NT+TY LI G C+ GK++ A E+ M G +IITYN
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNV 401
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
L LC ++K + ++ + G+ D+ TYNI++ G+CK G + DA +++ L +G
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQG 461
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 219
+ WTY TM+ GL K+GL EA L KM+++G
Sbjct: 462 LMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDG 496
Score = 168 bits (425), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 144/244 (59%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
L M+K G +P++VT+ SL++G+C + V A +F+ M MG P+V+ Y+ +I+GLC
Sbjct: 138 FLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC 197
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K K V+ AL+LL +M + I P+ +TYNSLI GLC +G+ S+A ++ M R D+
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVF 257
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
T+N+ +DA K V + +++I + + PD+ TY++L+ GLC R+ +A+E+F +
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM 317
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
KG + TY+ +ING CK + + L +M G + + +T+ +I G+
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKL 377
Query: 241 DKAE 244
+ AE
Sbjct: 378 NVAE 381
Score = 155 bits (391), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 137/243 (56%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M M+ G KPNVV YN+++DG C +V+ A + N M + G+ PDV++Y+ +I+GLC
Sbjct: 173 MFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLC 232
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++A ++ M +I P+ T+N+LID K G+VS A E +EM R DI+
Sbjct: 233 SSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIV 292
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY+ + LC +D+ + ++ KG PD+ TY+IL++G CK +++ ++F ++
Sbjct: 293 TYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM 352
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
++G N TY +I G C+ G + A + +M G + IT+ ++ L + G+
Sbjct: 353 SQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKI 412
Query: 241 DKA 243
+KA
Sbjct: 413 EKA 415
Score = 154 bits (388), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 137/239 (57%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M K G+ P+VVTYNSL+ G C + A + + MT+ ++PDV +++ +I+
Sbjct: 208 LLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACV 267
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K V+EA ++M + P+ +TY+ LI GLC ++ A E+ M +G D++
Sbjct: 268 KEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVV 327
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY+ ++ CK V+ G+ L ++ +G+ + TY IL+ G C+ G++ A+E+F+ +
Sbjct: 328 TYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM 387
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
G + N TYN +++GLC G ++AL +++ M+ NG D +T+ II + + GE
Sbjct: 388 VFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGE 446
Score = 150 bits (380), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 139/244 (56%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M++ M K+ + P+V T+N+L+D V++A+ + M + + PD+++YS++I GLC
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++EA + M S+ P+ +TY+ LI+G CK+ KV + +L EM RG + +
Sbjct: 303 MYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTV 362
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY + C+ ++ + ++++ G+ P++ TYN+LL GLC G+I+ A + D+
Sbjct: 363 TYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM 422
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
K G + + TYN +I G+CK G +A + + G + D T+ T++ L++KG
Sbjct: 423 QKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLR 482
Query: 241 DKAE 244
+A+
Sbjct: 483 READ 486
Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 126/229 (55%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M G+ N+ T N L++ +C ++++ A + M ++G P ++++ ++NG C+
Sbjct: 107 MQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDR 166
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V +AL + QM PN + YN++IDGLCK+ +V NA +LL+ M G D++TYNS
Sbjct: 167 VYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNS 226
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ LC ++ + + I PD+ T+N L+D K GR+ +A+E ++++ ++
Sbjct: 227 LISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRS 286
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
+ + TY+ +I GLC DEA + M GC D +T+ +I+
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILING 335
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 103/184 (55%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M M+ +G P+VVTY+ L++GYC +V +F M+Q GV + ++Y+I+I G C
Sbjct: 313 MFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYC 372
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ +N A + ++M + PN ITYN L+ GLC GK+ A +L +M G ADI+
Sbjct: 373 RAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIV 432
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN + +CK V + + +G+ PD+ TY ++ GL K G ++A +F+ +
Sbjct: 433 TYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKM 492
Query: 181 FKKG 184
+ G
Sbjct: 493 KEDG 496
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 120/233 (51%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNL 71
P++ ++ L+ + + + ++ M +G+ ++ + +I++N C+ ++ AL+
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 72 LKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 131
L +M P+ +T+ SL++G C+ +V +A + D+M G +++ YN+ +D LCK
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 132 GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT 191
VD + L+ ++ GI PD+ TYN L+ GLC GR DA + + K+ + +T
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 192 YNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+N +I+ KEG EA +M D +T+ +I L D+AE
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 108/209 (51%)
Query: 36 VFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLC 95
+F M Q P + +S +++ + KMK + + L +QM I N T N L++ C
Sbjct: 68 LFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFC 127
Query: 96 KTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMC 155
+ ++S A L +M G I+T+ S L+ C+G V + + +++ G +P++
Sbjct: 128 RCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVV 187
Query: 156 TYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM 215
YN ++DGLCK ++ +A ++ + K G + TYN++I+GLC G + +A ++S M
Sbjct: 188 IYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCM 247
Query: 216 EDNGCIHDPITFETIISALFEKGENDKAE 244
D TF +I A ++G +AE
Sbjct: 248 TKREIYPDVFTFNALIDACVKEGRVSEAE 276
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 90/151 (59%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M ++GV N VTY L+ GYC ++N A+ +F M GV P++++Y+++++GLC
Sbjct: 352 MSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGK 411
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ +AL +L M + + +TYN +I G+CK G+V++AW++ ++ +G DI TY +
Sbjct: 412 IEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTT 471
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMC 155
+ L K + AL +K+ + GI P+ C
Sbjct: 472 MMLGLYKKGLRREADALFRKMKEDGILPNEC 502
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 100/187 (53%), Gaps = 1/187 (0%)
Query: 57 NGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQP 116
NG+ MK+ +++L+L M + +P+ ++ L+ + K K L ++M + G P
Sbjct: 55 NGIRFMKL-DDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIP 113
Query: 117 ADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 176
++ T N L+ C+ + ++ + K+I G +P + T+ LL+G C+ R+ DA +
Sbjct: 114 HNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYM 173
Query: 177 FQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFE 236
F + GY N YNT+I+GLCK D AL L+++ME +G D +T+ ++IS L
Sbjct: 174 FDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCS 233
Query: 237 KGENDKA 243
G A
Sbjct: 234 SGRWSDA 240
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+LA M K G+ ++VTYN ++ G C EV A ++ ++ G+ PD+ +Y+ M+ GL
Sbjct: 418 ILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLY 477
Query: 61 KMKMVNEALNLLKQMHSEKIIPN 83
K + EA L ++M + I+PN
Sbjct: 478 KKGLRREADALFRKMKEDGILPN 500
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 168 bits (425), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 143/239 (59%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L MMK G +P++VT+ SL+ G+CLVN + A ++ M + G P+V+ Y+ +I+GLC
Sbjct: 128 VLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLC 187
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K +N AL LL +M + + + +TYN+L+ GLC +G+ S+A +L +M R D++
Sbjct: 188 KNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVV 247
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
T+ + +D K ++D+ L K++I + P+ TYN +++GLC GR+ DA++ F +
Sbjct: 248 TFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLM 307
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
KG N TYNT+I+G CK + DE + L +M G D T+ T+I + G+
Sbjct: 308 ASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGK 366
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 130/226 (57%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G+ ++ ++ L+ +C + ++ A +V M ++G P ++++ +++G C + + +A
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
+L+ M PN + YN+LIDGLCK G+++ A ELL+EM +G AD++TYN+ L
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
LC +++ ++ + I PD+ T+ L+D K G + +AQE+++++ + + N
Sbjct: 221 LCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
N TYN++INGLC G +A M GC + +T+ T+IS
Sbjct: 281 NVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGF 326
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 120/217 (55%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ V PN VTYNS+++G C+ + A+ F+ M G FP+V++Y+ +I+G CK +M
Sbjct: 272 MIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRM 331
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V+E + L ++M E + TYN+LI G C+ GK+ A ++ M R DIIT+
Sbjct: 332 VDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCI 391
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
L LC ++ + + + + YNI++ GLCK +++ A E+F L +G
Sbjct: 392 LLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEG 451
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCI 221
+ TY MI GLCK G EA L+ +M++ G I
Sbjct: 452 VKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488
Score = 137 bits (346), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 127/244 (52%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
ML MMK+ + P+VVT+ +L+D + +++AQ ++ M Q V P+ ++Y+ +INGLC
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ +A M S+ PN +TYN+LI G CK V +L M G ADI
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN+ + C+ + + + ++ + + PD+ T+ ILL GLC G I+ A F D+
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDM 412
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+ + YN MI+GLCK ++A L ++ G D T+ +I L + G
Sbjct: 413 RESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPR 472
Query: 241 DKAE 244
+A+
Sbjct: 473 READ 476
Score = 134 bits (338), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 134/243 (55%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M K+G+ +VVTYN+L+ G C + A + M + + PDV++++ +I+
Sbjct: 198 LLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFV 257
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K ++EA L K+M + PN +TYNS+I+GLC G++ +A + D M +G +++
Sbjct: 258 KQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVV 317
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN+ + CK VD+G+ L +++ +G D+ TYN L+ G C+ G+++ A ++F +
Sbjct: 318 TYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWM 377
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+ + T+ +++GLC G + AL M ++ + + +I L + +
Sbjct: 378 VSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKV 437
Query: 241 DKA 243
+KA
Sbjct: 438 EKA 440
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 105/181 (58%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
+M +G PNVVTYN+L+ G+C V++ +F M+ G D+ +Y+ +I+G C++
Sbjct: 306 LMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVG 365
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
+ AL++ M S ++ P+ IT+ L+ GLC G++ +A D+M + I+ YN
Sbjct: 366 KLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYN 425
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ LCK V+K L ++ +G++PD TY I++ GLCK G ++A E+ + + ++
Sbjct: 426 IMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEE 485
Query: 184 G 184
G
Sbjct: 486 G 486
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 118/228 (51%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNL 71
P++V + L+ + M G+ D+ S++I+I+ C+ ++ AL++
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 72 LKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 131
L +M P+ +T+ SL+ G C ++ +A+ L+ M G +++ YN+ +D LCK
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188
Query: 132 GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT 191
++ + L+ ++ KG+ D+ TYN LL GLC GR DA + +D+ K+ N + T
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248
Query: 192 YNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
+ +I+ K+G DEA L +M + + +T+ +II+ L G
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGR 296
Score = 103 bits (258), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 106/225 (47%)
Query: 20 LMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEK 79
L G+ A A+F M P ++ ++ ++ ++ + ++M
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 80 IIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGI 139
I + ++ LI C+ ++S A +L +M G I+T+ S L C + +
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 140 ALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGL 199
+L+ ++ G +P++ YN L+DGLCK G + A E+ ++ KKG + TYNT++ GL
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 200 CKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
C G + +A ++ M D +TF +I ++G D+A+
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQ 266
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 166 bits (420), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 134/229 (58%), Gaps = 4/229 (1%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ G +P+VVT+ +LM+G C V +A A+ + M + G P Y +INGLCKM
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
ALNLL +M I + + YN++ID LCK G +A L EMH +G D+ITY+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D+ C+ L++ +I++ I PD+ T++ L++ L K G++ +A+E++ D+ ++G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
TYN+MI+G CK+ ++A ++ M C D +TF T+I+
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLING 225
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/243 (34%), Positives = 140/243 (57%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L+ M + +K +VV YN+++D C AQ +F M G+FPDV++YS MI+ C
Sbjct: 63 LLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFC 122
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ +A LL+ M +I P+ +T+++LI+ L K GKVS A E+ +M RG I
Sbjct: 123 RSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTI 182
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYNS +D CK ++ ++ + K PD+ T++ L++G CK R+ + E+F ++
Sbjct: 183 TYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 242
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
++G N TY T+I+G C+ G D A L++ M +G + ITF++++++L K E
Sbjct: 243 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKEL 302
Query: 241 DKA 243
KA
Sbjct: 303 RKA 305
Score = 137 bits (345), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 117/216 (54%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ M +G+ P+V+TY+ ++D +C A+ + M + + PDV+++S +IN L
Sbjct: 98 LFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALV 157
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K V+EA + M I P TITYNS+IDG CK ++++A +LD M + D++
Sbjct: 158 KEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVV 217
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
T+++ ++ CK VD G+ + ++ +GI + TY L+ G C+ G + AQ++ +
Sbjct: 218 TFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVM 277
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKME 216
G N T+ +M+ LC + +A ++ ++
Sbjct: 278 ISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQ 313
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 113/190 (59%), Gaps = 1/190 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M+++ + P+VVT+++L++ +V++A+ ++ M + G+FP ++Y+ MI+G C
Sbjct: 133 LLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFC 192
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K +N+A +L M S+ P+ +T+++LI+G CK +V N E+ EMH RG A+ +
Sbjct: 193 KQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTV 252
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY + + C+ +D L+ +I G+ P+ T+ +L LC ++ A + +DL
Sbjct: 253 TYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDL 312
Query: 181 FK-KGYNLNN 189
K +G++L +
Sbjct: 313 QKSEGHHLED 322
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Query: 114 GQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDA 173
G D++T+ + ++ LC V + +AL+ +++++G QP Y +++GLCK G + A
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESA 60
Query: 174 QEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
+ + + + YN +I+ LCK+G A L ++M D G D IT+ +I +
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 234 LFEKGENDKAE 244
G AE
Sbjct: 121 FCRSGRWTDAE 131
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 135/215 (62%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+++ V PNV TYNSL++G+C+ + A+ +F+ M G FPDV++Y+ +I G CK K
Sbjct: 280 MIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKR 339
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V + + L +M + ++ + TYN+LI G C+ GK++ A ++ + M G DI+TYN
Sbjct: 340 VEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNI 399
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
LD LC ++K + +++ + + D+ TYNI++ GLC+ ++K+A +F+ L +KG
Sbjct: 400 LLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKG 459
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 219
+ Y TMI+GLC++GL EA L +M+++G
Sbjct: 460 VKPDAIAYITMISGLCRKGLQREADKLCRRMKEDG 494
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 135/244 (55%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M+K+ + PNV+ + +L+D + + +A+ ++ M + V P+V +Y+ +ING C
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ +A + M S+ P+ +TYN+LI G CK+ +V + +L EM +G D
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 360
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN+ + C+ ++ + +++D G+ PD+ TYNILLD LC G+I+ A + +DL
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
K +++ TYN +I GLC+ EA L + G D I + T+IS L KG
Sbjct: 421 QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQ 480
Query: 241 DKAE 244
+A+
Sbjct: 481 READ 484
Score = 148 bits (373), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 138/240 (57%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
MMK G +P++VT SL++G+C N +A ++ ++M G P+V+ Y+ +INGLCK +
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+N AL + M + I + +TYN+LI GL +G+ ++A LL +M R ++I + +
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 259
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D K ++ + L K++I + + P++ TYN L++G C G + DA+ +F + KG
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 319
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ TYNT+I G CK ++ + L +M G + D T+ T+I + G+ + A+
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 379
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 122/226 (53%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G+ ++ ++ L+ +C + ++ A A+ M ++G P +++ ++NG C+ EA
Sbjct: 109 GISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEA 168
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
++L+ M +PN + YN++I+GLCK ++NA E+ M +G AD +TYN+ +
Sbjct: 169 VSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISG 228
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
L L++ ++ + I P++ + L+D K G + +A+ +++++ ++ N
Sbjct: 229 LSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPN 288
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
+TYN++ING C G +A + M GC D +T+ T+I+
Sbjct: 289 VFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 334
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 105/193 (54%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M +M+ +G P+VVTYN+L+ G+C V +F MT G+ D +Y+ +I+G C
Sbjct: 311 MFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYC 370
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ +N A + +M + P+ +TYN L+D LC GK+ A +++++ DII
Sbjct: 371 QAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDII 430
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN + LC+ + + L + + KG++PD Y ++ GLC+ G ++A ++ + +
Sbjct: 431 TYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRM 490
Query: 181 FKKGYNLNNWTYN 193
+ G+ + Y+
Sbjct: 491 KEDGFMPSERIYD 503
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 105/210 (50%)
Query: 29 EVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYN 88
+ + A ++F M Q P ++ ++ ++ + KM + + L +M + I + ++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 89 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDK 148
LI C+ ++S A LL +M G I+T S L+ C+G+ + ++L+ +
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 149 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 208
G P++ YN +++GLCK + +A EVF + KKG + TYNT+I+GL G + +A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 209 LTLMSKMEDNGCIHDPITFETIISALFEKG 238
L+ M + I F +I ++G
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEG 268
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 84/174 (48%)
Query: 66 NEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 125
++A +L +M + IP+ + + ++ + K K L +M G D+ ++
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 126 LDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 185
+ C+ + +AL+ K++ G +P + T LL+G C+ R ++A + + G+
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180
Query: 186 NLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
N YNT+INGLCK + AL + ME G D +T+ T+IS L G
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGR 234
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M+ + K + +++TYN ++ G C +++ +A +F ++T+ GV PD ++Y MI+GLC
Sbjct: 416 MVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLC 475
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMH 111
+ + EA L ++M + +P+ Y+ + + S + EL+ H
Sbjct: 476 RKGLQREADKLCRRMKEDGFMPSERIYDETL----RDHYTSLSAELIKAAH 522
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 165 bits (417), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/243 (34%), Positives = 137/243 (56%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
L ++ KPNV TY S++ GYC +++N+A+ +F+ M + G+FP+V +Y+ +ING C
Sbjct: 345 FLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHC 404
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K A L+ M E +PN TYN+ ID LCK + A+ELL++ G AD +
Sbjct: 405 KAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGV 464
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY + CK + +++ +A ++ G + DM NIL+ C+ ++K+++ +FQ +
Sbjct: 465 TYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLV 524
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
G TY +MI+ CKEG D AL M+ +GC+ D T+ ++IS L +K
Sbjct: 525 VSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMV 584
Query: 241 DKA 243
D+A
Sbjct: 585 DEA 587
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 120/241 (49%), Gaps = 1/241 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ G KPN++ + SL+DG C + +A + M + G P+V +++ +I+GLCK
Sbjct: 278 MIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGW 337
Query: 65 VNEALNL-LKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
+A L LK + S+ PN TY S+I G CK K++ A L M +G ++ TY
Sbjct: 338 TEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYT 397
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ ++ CK + L+ + D+G P++ TYN +D LCK R +A E+ F
Sbjct: 398 TLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSC 457
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
G + TY +I CK+ ++AL +M G D +I+A + + ++
Sbjct: 458 GLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKES 517
Query: 244 E 244
E
Sbjct: 518 E 518
Score = 121 bits (303), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 125/244 (51%), Gaps = 1/244 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M+ M QG+ P+ +T N +++ + + A+ VF+ M+ GV PD SY +M+ G
Sbjct: 169 MVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCF 228
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + EA L M IP+ T ++ LC+ G V+ A +M G ++I
Sbjct: 229 RDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLI 288
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
+ S +D LCK + + ++++++ G +P++ T+ L+DGLCK G + A +F L
Sbjct: 289 NFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKL 348
Query: 181 FKK-GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
+ Y N TY +MI G CKE + A L S+M++ G + T+ T+I+ + G
Sbjct: 349 VRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGS 408
Query: 240 NDKA 243
+A
Sbjct: 409 FGRA 412
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 119/226 (52%), Gaps = 1/226 (0%)
Query: 20 LMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEK 79
++ + + +N+A + M G+ P ++ + ++ ++ ++ A N+ +M
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 80 IIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGI 139
++P++ +Y ++ G + GK+ A L M RG D T L ALC+ V++ I
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 140 ALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGL 199
+K+ID G +P++ + L+DGLCK G IK A E+ +++ + G+ N +T+ +I+GL
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332
Query: 200 CKEGLFDEALTLMSKMEDNGCIHDPI-TFETIISALFEKGENDKAE 244
CK G ++A L K+ + + T+ ++I ++ + ++AE
Sbjct: 333 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAE 378
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 106/233 (45%), Gaps = 3/233 (1%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G++ + VTY L+ C N++N+A A F M + G D+ +I+I C+ K + E+
Sbjct: 458 GLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKES 517
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
L + + S +IP TY S+I CK G + A + M G D TY S +
Sbjct: 518 ERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISG 577
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
LCK VD+ L + +ID+G+ P T L CK +A + + L KK L
Sbjct: 578 LCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKK---LW 634
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
T T++ LC E A K+ + D +T +A E G+N+
Sbjct: 635 IRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGKNN 687
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 3/199 (1%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M K G + ++ N L+ +C ++ +++ +F + +G+ P +Y+ MI+ CK
Sbjct: 489 MNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGD 548
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++ AL M +P++ TY SLI GLCK V A +L + M RG +T +
Sbjct: 549 IDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVT 608
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
CK + + L++ +DK + + T L+ LC ++ A FQ L +K
Sbjct: 609 LAYEYCKRNDSANAMILLEP-LDKKLW--IRTVRTLVRKLCSEKKVGVAALFFQKLLEKD 665
Query: 185 YNLNNWTYNTMINGLCKEG 203
+ + T + G
Sbjct: 666 SSADRVTLAAFTTACSESG 684
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 3/169 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ +++ G+ P TY S++ YC +++ A F+ M + G PD +Y +I+GLC
Sbjct: 520 LFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLC 579
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K MV+EA L + M + P +T +L CK +NA LL+ + + I
Sbjct: 580 KKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLD---KKLWIR 636
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGR 169
T + + LC V +K+++K D T + G+
Sbjct: 637 TVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGK 685
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 87/243 (35%), Positives = 142/243 (58%), Gaps = 3/243 (1%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ + PN+ TY SL++G+C+ V++A+ +F M G FPDV++Y+ +ING CK K
Sbjct: 273 MIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKK 332
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V++A+ + +M + + NTITY +LI G + GK + A E+ M RG P +I TYN
Sbjct: 333 VDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNV 392
Query: 125 FLDALCKGHHVDKGIALIKKVIDK---GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF 181
L LC V K + + + + + G+ P++ TYN+LL GLC G+++ A VF+D+
Sbjct: 393 LLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMR 452
Query: 182 KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
K+ ++ TY +I G+CK G A+ L + G + +T+ T+IS LF +G
Sbjct: 453 KREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKH 512
Query: 242 KAE 244
+A
Sbjct: 513 EAH 515
Score = 160 bits (406), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 141/243 (58%)
Query: 2 LAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCK 61
L MMK G +P++VT+ SL++G+CL N + +A ++ N M +MG+ PDV+ Y+ +I+ LCK
Sbjct: 130 LGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCK 189
Query: 62 MKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 121
VN AL+L QM + I P+ + Y SL++GLC +G+ +A LL M R D+IT
Sbjct: 190 NGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVIT 249
Query: 122 YNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF 181
+N+ +DA K L ++I I P++ TY L++G C G + +A+++F +
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309
Query: 182 KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
KG + Y ++ING CK D+A+ + +M G + IT+ T+I + G+ +
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPN 369
Query: 242 KAE 244
A+
Sbjct: 370 VAQ 372
Score = 150 bits (380), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 132/243 (54%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M+ M++ G+KP+VV Y +++D C VN A ++F+ M G+ PDV+ Y+ ++NGLC
Sbjct: 164 MVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLC 223
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+A +LL+ M KI P+ IT+N+LID K GK +A EL +EM +I
Sbjct: 224 NSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIF 283
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY S ++ C VD+ + + KG PD+ Y L++G CKC ++ DA ++F ++
Sbjct: 284 TYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM 343
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+KG N TY T+I G + G + A + S M G + T+ ++ L G+
Sbjct: 344 SQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKV 403
Query: 241 DKA 243
KA
Sbjct: 404 KKA 406
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 126/226 (55%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
GV ++ T N LM+ +C ++ A + M ++G PD+++++ +ING C + EA
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
++++ QM I P+ + Y ++ID LCK G V+ A L D+M G D++ Y S ++
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
LC +L++ + + I+PD+ T+N L+D K G+ DA+E++ ++ + N
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
+TY ++ING C EG DEA + ME GC D + + ++I+
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGF 327
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 113/216 (52%)
Query: 29 EVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYN 88
+ N+A +F M + P ++ ++ ++N + KMK + +NL + + + T N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 89 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDK 148
L++ C++ + A L +M G DI+T+ S ++ C G+ +++ ++++ ++++
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 149 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 208
GI+PD+ Y ++D LCK G + A +F + G + Y +++NGLC G + +A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 209 LTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+L+ M D ITF +I A ++G+ AE
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAE 267
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 81/150 (54%), Gaps = 3/150 (2%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQM---GVFPDVLSYSIMINGLCK 61
M+ +GV PN+ TYN L+ C +V KA +F M + GV P++ +Y+++++GLC
Sbjct: 378 MVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCY 437
Query: 62 MKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 121
+ +AL + + M ++ ITY +I G+CK GKV NA L + +G +++T
Sbjct: 438 NGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVT 497
Query: 122 YNSFLDALCKGHHVDKGIALIKKVIDKGIQ 151
Y + + L + + L +K+ + G+
Sbjct: 498 YTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 163 bits (413), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 142/244 (58%), Gaps = 3/244 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M+++G+ PNV+TYN+L++GYC + A V M + P+ +Y+ +I G C
Sbjct: 380 LLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC 439
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K V++A+ +L +M K++P+ +TYNSLIDG C++G +A+ LL M+ RG D
Sbjct: 440 KSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQW 498
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY S +D+LCK V++ L + KG+ P++ Y L+DG CK G++ +A + + +
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETI-ISALFEKGE 239
K N+ T+N +I+GLC +G EA L KM G + ++ +TI I L + G+
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG-LQPTVSTDTILIHRLLKDGD 617
Query: 240 NDKA 243
D A
Sbjct: 618 FDHA 621
Score = 152 bits (383), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 131/243 (53%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M+++ V P+VVTYNSL+DG C + A + + M G+ PD +Y+ MI+ LC
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 508
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K K V EA +L + + + PN + Y +LIDG CK GKV A +L++M + + +
Sbjct: 509 KSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSL 568
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
T+N+ + LC + + L +K++ G+QP + T IL+ L K G A FQ +
Sbjct: 569 TFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQM 628
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
G + TY T I C+EG +A +M+KM +NG D T+ ++I + G+
Sbjct: 629 LSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQT 688
Query: 241 DKA 243
+ A
Sbjct: 689 NFA 691
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 133/244 (54%), Gaps = 1/244 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
++ +M + + PN TYN L+ GYC N V+KA V N M + V PDV++Y+ +I+G C
Sbjct: 415 VVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQC 473
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + A LL M+ ++P+ TY S+ID LCK+ +V A +L D + +G +++
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVV 533
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
Y + +D CK VD+ +++K++ K P+ T+N L+ GLC G++K+A + + +
Sbjct: 534 MYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKM 593
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
K G T +I+ L K+G FD A + +M +G D T+ T I +G
Sbjct: 594 VKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRL 653
Query: 241 DKAE 244
AE
Sbjct: 654 LDAE 657
Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 136/239 (56%), Gaps = 1/239 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
+++ G+ P+ TY SL+ GYC +++ A VFN M G + ++Y+ +I+GLC +
Sbjct: 244 IVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR 303
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++EA++L +M ++ P TY LI LC + + S A L+ EM G +I TY
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D+LC +K L+ ++++KG+ P++ TYN L++G CK G I+DA +V + + +
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ N TYN +I G CK + +A+ +++KM + + D +T+ ++I G D A
Sbjct: 424 LSPNTRTYNELIKGYCKSNVH-KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 132/236 (55%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L++M +G+ P+ TY S++D C V +A +F+++ Q GV P+V+ Y+ +I+G C
Sbjct: 484 LLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYC 543
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K V+EA +L++M S+ +PN++T+N+LI GLC GK+ A L ++M G +
Sbjct: 544 KAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVS 603
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
T + L K D + ++++ G +PD TY + C+ GR+ DA+++ +
Sbjct: 604 TDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKM 663
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFE 236
+ G + + +TY+++I G G + A ++ +M D GC TF ++I L E
Sbjct: 664 RENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLE 719
Score = 113 bits (283), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 119/222 (53%)
Query: 17 YNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMH 76
YN+L++ V++ + V+ M + V P++ +Y+ M+NG CK+ V EA + ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 77 SEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVD 136
+ P+ TY SLI G C+ + +A+++ +EM ++G + + Y + LC +D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 137 KGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMI 196
+ + L K+ D P + TY +L+ LC R +A + +++ + G N TY +I
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 197 NGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
+ LC + F++A L+ +M + G + + IT+ +I+ ++G
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRG 407
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M+A M + GV P++ TY+SL+ GY + + N A V M G P ++ +I L
Sbjct: 659 MMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLL 718
Query: 61 KMKM------------------VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSN 102
+MK + + LL++M + PN +Y LI G+C+ G +
Sbjct: 719 EMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRV 778
Query: 103 AWELLDEMHV-RGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILL 161
A ++ D M G + +N+ L CK ++ ++ +I G P + + +L+
Sbjct: 779 AEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLI 838
Query: 162 DGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCI 221
GL K G + VFQ+L + GY + + +I+G+ K+GL + L + ME NGC
Sbjct: 839 CGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCK 898
Query: 222 HDPITFETIISA 233
T+ +I
Sbjct: 899 FSSQTYSLLIEG 910
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 118/242 (48%), Gaps = 22/242 (9%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ G KP+ TY + + YC + A+ + M + GV PD+ +YS +I G +
Sbjct: 628 MLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQ 687
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLC--KTGKVSNAWELLDEMHVRGQPADIITY 122
N A ++LK+M P+ T+ SLI L K GK +G ++
Sbjct: 688 TNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQ------------KGSEPELCAM 735
Query: 123 NSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 182
++ ++ D + L++K+++ + P+ +Y L+ G+C+ G ++ A++VF + +
Sbjct: 736 SNMME-------FDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQR 788
Query: 183 -KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
+G + + +N +++ CK +EA ++ M G + + + +I L++KGE +
Sbjct: 789 NEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKE 848
Query: 242 KA 243
+
Sbjct: 849 RG 850
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 66/122 (54%)
Query: 122 YNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF 181
YN+ L++L + VD+ + ++++ + P++ TYN +++G CK G +++A + +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 182 KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
+ G + + +TY ++I G C+ D A + ++M GC + + + +I L D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 242 KA 243
+A
Sbjct: 306 EA 307
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 142/239 (59%)
Query: 6 MKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMV 65
M + PN +++N ++ C + V++A VF M + PD +Y +++GLCK + +
Sbjct: 179 MNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERI 238
Query: 66 NEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 125
+EA+ LL +M SE P+ + YN LIDGLCK G ++ +L+D M ++G + +TYN+
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298
Query: 126 LDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 185
+ LC +DK ++L+++++ P+ TY L++GL K R DA + + ++GY
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358
Query: 186 NLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+LN Y+ +I+GL KEG +EA++L KM + GC + + + ++ L +G+ ++A+
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAK 417
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 139/243 (57%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M +G P+ V YN L+DG C ++ + + + M G P+ ++Y+ +I+GLC
Sbjct: 244 LLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLC 303
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+++A++LL++M S K IPN +TY +LI+GL K + ++A LL M RG +
Sbjct: 304 LKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQH 363
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
Y+ + L K ++ ++L +K+ +KG +P++ Y++L+DGLC+ G+ +A+E+ +
Sbjct: 364 IYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRM 423
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
G N +TY++++ G K GL +EA+ + +M+ GC + + +I L G
Sbjct: 424 IASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRV 483
Query: 241 DKA 243
+A
Sbjct: 484 KEA 486
Score = 137 bits (344), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 126/239 (52%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M +G PN VTYN+L+ G CL +++KA ++ M P+ ++Y +INGL K +
Sbjct: 283 MFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRR 342
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+A+ LL M N Y+ LI GL K GK A L +M +G +I+ Y+
Sbjct: 343 ATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSV 402
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D LC+ ++ ++ ++I G P+ TY+ L+ G K G ++A +V++++ K G
Sbjct: 403 LVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTG 462
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ N + Y+ +I+GLC G EA+ + SKM G D + + +II L G D A
Sbjct: 463 CSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAA 521
Score = 134 bits (336), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 132/239 (55%), Gaps = 8/239 (3%)
Query: 11 KPNVVTYNSLMDGYCLVNE------VNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
K +V ++NS+++ ++NE + V N+ M + P+ LS++++I LCK++
Sbjct: 145 KRSVKSFNSVLN--VIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRF 202
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V+ A+ + + M K +P+ TY +L+DGLCK ++ A LLDEM G + YN
Sbjct: 203 VDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNV 262
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D LCK + + L+ + KG P+ TYN L+ GLC G++ A + + +
Sbjct: 263 LIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSK 322
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
N+ TY T+INGL K+ +A+ L+S ME+ G + + +IS LF++G+ ++A
Sbjct: 323 CIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEA 381
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 127/241 (52%), Gaps = 3/241 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L+ M ++G N Y+ L+ G + +A +++ M + G P+++ YS++++GLC
Sbjct: 349 LLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLC 408
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ NEA +L +M + +PN TY+SL+ G KTG A ++ EM G +
Sbjct: 409 REGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKF 468
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
Y+ +D LC V + + + K++ GI+PD Y+ ++ GLC G + A +++ ++
Sbjct: 469 CYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEM 528
Query: 181 F---KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK 237
+ + TYN +++GLC + A+ L++ M D GC D IT T ++ L EK
Sbjct: 529 LCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEK 588
Query: 238 G 238
Sbjct: 589 S 589
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 122/237 (51%), Gaps = 3/237 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M+ PN VTY +L++G A + ++M + G + YS++I+GL
Sbjct: 314 LLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLF 373
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K EA++L ++M + PN + Y+ L+DGLC+ GK + A E+L+ M G +
Sbjct: 374 KEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAY 433
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY+S + K ++ + + K++ G + Y++L+DGLC GR+K+A V+ +
Sbjct: 434 TYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKM 493
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM---EDNGCIHDPITFETIISAL 234
G + Y+++I GLC G D AL L +M E+ D +T+ ++ L
Sbjct: 494 LTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGL 550
Score = 97.1 bits (240), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 105/209 (50%), Gaps = 19/209 (9%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M K G N Y+ L+DG C V V +A V++ M +G+ PD ++YS +I GLC +
Sbjct: 458 MDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGS 517
Query: 65 VNEALNLLKQM---HSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 121
++ AL L +M K P+ +TYN L+DGLC +S A +LL+ M RG D+IT
Sbjct: 518 MDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVIT 577
Query: 122 YNSFLDALC-KGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
N+FL+ L K + DKG + +++++ + L K R+ A + + +
Sbjct: 578 CNTFLNTLSEKSNSCDKGRSFLEELVVR---------------LLKRQRVSGACTIVEVM 622
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEAL 209
K T+ ++ +CK + A+
Sbjct: 623 LGKYLAPKTSTWAMIVREICKPKKINAAI 651
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 142/239 (59%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
MMK G++P++VT +SL++G+CL N + A V M +MG+ DV+ +I+I+ LCK ++
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V AL +LK+M I PN +TY+SLI GLCK+G++++A L EM + ++IT+++
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+DA K + K ++ K +I I P++ TY+ L+ GLC R+ +A ++ + KG
Sbjct: 124 LIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKG 183
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
N TY+T+ NG K D+ + L+ M G + ++ T+I F+ G+ D A
Sbjct: 184 CTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLA 242
Score = 137 bits (345), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 133/240 (55%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M + + PNV+T+++L+D Y +++K +V+ M QM + P+V +YS +I GLC
Sbjct: 109 MDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNR 168
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V+EA+ +L M S+ PN +TY++L +G K+ +V + +LLD+M RG A+ ++ N+
Sbjct: 169 VDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNT 228
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ + +D + + + G+ P++ +YNI+L GL G ++ A F+ + K
Sbjct: 229 LIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTR 288
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+L+ TY MI+G+CK + EA L K++ D + +I+ L G +A+
Sbjct: 289 NDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEAD 348
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 88/173 (50%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
ML +M+ +G PNVVTY++L +G+ + V+ + + M Q GV + +S + +I G
Sbjct: 175 MLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYF 234
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ ++ AL + M S +IPN +YN ++ GL G+V A + M DII
Sbjct: 235 QAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDII 294
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDA 173
TY + +CK V + L K+ K ++PD Y I++ L + G +A
Sbjct: 295 TYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEA 347
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 68/131 (51%)
Query: 114 GQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDA 173
G DI+T +S ++ C + + + + ++ GI+ D+ IL+D LCK + A
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 174 QEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
EV + + +G + N TY+++I GLCK G +A + +M+ + ITF +I A
Sbjct: 68 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 127
Query: 234 LFEKGENDKAE 244
++G+ K +
Sbjct: 128 YAKRGKLSKVD 138
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 54/101 (53%)
Query: 144 KVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEG 203
K++ GI+PD+ T + L++G C IKDA V + K G + +I+ LCK
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 204 LFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
L AL ++ +M+D G + +T+ ++I+ L + G AE
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAE 103
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 161 bits (407), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 138/235 (58%), Gaps = 1/235 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L MMK G P++VT NSL++G+C N +++A A+ + M +MG PD ++++ +++GL
Sbjct: 132 ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 191
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ +EA+ L+++M + P+ +TY ++I+GLCK G+ A LL++M AD++
Sbjct: 192 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 251
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
YN+ +D LCK H+D L K+ KGI+PD+ TYN L+ LC GR DA + D+
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM-EDNGCIHDPITFETIISAL 234
+K N + +N +I+ KEG EA L +M + C D + + T+I
Sbjct: 312 LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGF 366
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 142/240 (59%), Gaps = 1/240 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMG-VFPDVLSYSIMINGL 59
+L+ M+++ + P++V +N+L+D + ++ +A+ +++ M + FPDV++Y+ +I G
Sbjct: 307 LLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGF 366
Query: 60 CKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADI 119
CK K V E + + ++M ++ NT+TY +LI G + NA + +M G DI
Sbjct: 367 CKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDI 426
Query: 120 ITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
+TYN LD LC +V+ + + + + + ++ D+ TY +++ LCK G+++D ++F
Sbjct: 427 MTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCS 486
Query: 180 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
L KG N TY TM++G C++GL +EA L +M+++G + + T+ T+I A G+
Sbjct: 487 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGD 546
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 132/234 (56%), Gaps = 5/234 (2%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNL 71
P+VV YN+L+ G+C V + VF M+Q G+ + ++Y+ +I+G + + + A +
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 413
Query: 72 LKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 131
KQM S+ + P+ +TYN L+DGLC G V A + + M R DI+TY + ++ALCK
Sbjct: 414 FKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCK 473
Query: 132 GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT 191
V+ G L + KG++P++ TY ++ G C+ G ++A +F ++ + G N+ T
Sbjct: 474 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGT 533
Query: 192 YNTMINGLCKEGLFDEALT--LMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
YNT+I ++G DEA + L+ +M G D TF +++ + G DK+
Sbjct: 534 YNTLIRARLRDG--DEAASAELIKEMRSCGFAGDASTF-GLVTNMLHDGRLDKS 584
Score = 141 bits (355), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 126/241 (52%), Gaps = 1/241 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M +G+KP+V TYN L+ C + A + + M + + PD++ ++ +I+ K
Sbjct: 276 METKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGK 335
Query: 65 VNEALNLLKQM-HSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
+ EA L +M S+ P+ + YN+LI G CK +V E+ EM RG + +TY
Sbjct: 336 LVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYT 395
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ + + D + K+++ G+ PD+ TYNILLDGLC G ++ A VF+ + K+
Sbjct: 396 TLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKR 455
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
L+ TY TMI LCK G ++ L + G + +T+ T++S KG ++A
Sbjct: 456 DMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 515
Query: 244 E 244
+
Sbjct: 516 D 516
Score = 137 bits (346), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 135/240 (56%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M G+ N+ TY+ ++ +C ++++ A A+ M ++G P +++ + ++NG C
Sbjct: 101 MQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNR 160
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++EA+ L+ QM P+T+T+ +L+ GL + K S A L++ M V+G D++TY +
Sbjct: 161 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 220
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++ LCK D + L+ K+ I+ D+ YN ++DGLCK + DA ++F + KG
Sbjct: 221 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ +TYN +I+ LC G + +A L+S M + D + F +I A ++G+ +AE
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAE 340
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 126/235 (53%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+K P++V ++ L+ +N+ + ++ M +G+ ++ +YSI IN C+
Sbjct: 66 MVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQ 125
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++ AL +L +M P+ +T NSL++G C ++S A L+D+M G D +T+ +
Sbjct: 126 LSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTT 185
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ L + + + +AL+++++ KG QPD+ TY +++GLCK G A + + K
Sbjct: 186 LVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK 245
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
+ YNT+I+GLCK D+A L +KME G D T+ +IS L G
Sbjct: 246 IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGR 300
Score = 117 bits (292), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 115/215 (53%)
Query: 29 EVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYN 88
+++ A +F M + FP ++ +S +++ + KM + ++L +QM + I N TY+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 89 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDK 148
I+ C+ ++S A +L +M G I+T NS L+ C G+ + + +AL+ ++++
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 149 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 208
G QPD T+ L+ GL + + +A + + + KG + TY +INGLCK G D A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 209 LTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
L L++KME D + + TII L + D A
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 269
Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 111/205 (54%), Gaps = 1/205 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M ++G+ N VTY +L+ G+ + + AQ VF M GV PD+++Y+I+++GLC
Sbjct: 382 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGN 441
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V AL + + M + + +TY ++I+ LCK GKV + W+L + ++G +++TY +
Sbjct: 442 VETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 501
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ C+ ++ AL ++ + G P+ TYN L+ + G + E+ +++ G
Sbjct: 502 MMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCG 561
Query: 185 YNLNNWTYNTMINGLCKEGLFDEAL 209
+ + T+ + N L +G D++
Sbjct: 562 FAGDASTFGLVTNML-HDGRLDKSF 585
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 160 bits (406), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 145/270 (53%), Gaps = 28/270 (10%)
Query: 2 LAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQM------------------ 43
L+ M+K G+ P+ V+YN+L+DG+C V +A+A+ + ++++
Sbjct: 184 LSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAI 243
Query: 44 ----------GVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDG 93
G PDV+++S +IN LCK V E LL++M + PN +TY +L+D
Sbjct: 244 EEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDS 303
Query: 94 LCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPD 153
L K +A L +M VRG P D++ Y +D L K + + K +++ P+
Sbjct: 304 LFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPN 363
Query: 154 MCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMS 213
+ TY L+DGLCK G + A+ + + +K N TY++MING K+G+ +EA++L+
Sbjct: 364 VVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLR 423
Query: 214 KMEDNGCIHDPITFETIISALFEKGENDKA 243
KMED + + T+ T+I LF+ G+ + A
Sbjct: 424 KMEDQNVVPNGFTYGTVIDGLFKAGKEEMA 453
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 133/239 (55%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M + V PN VTY +L+D N A A+++ M G+ D++ Y+++++GL
Sbjct: 281 LLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLF 340
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + EA K + + +PN +TY +L+DGLCK G +S+A ++ +M + +++
Sbjct: 341 KAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVV 400
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY+S ++ K +++ ++L++K+ D+ + P+ TY ++DGL K G+ + A E+ +++
Sbjct: 401 TYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 460
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
G NN+ + ++N L + G E L+ M G D I + ++I F+ G+
Sbjct: 461 RLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGD 519
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 135/267 (50%), Gaps = 36/267 (13%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNL 71
PNVVTY +L+DG C +++ A+ + M + V P+V++YS MING K M+ EA++L
Sbjct: 362 PNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSL 421
Query: 72 LKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHV------------------- 112
L++M + ++PN TY ++IDGL K GK A EL EM +
Sbjct: 422 LRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKR 481
Query: 113 ----------------RGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCT 156
+G D I Y S +D KG + +A +++ ++G+ D+ +
Sbjct: 482 IGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVS 541
Query: 157 YNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKME 216
YN+L+ G+ K G++ A ++ + +KG + T+N M+N K+G + L L KM+
Sbjct: 542 YNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMK 600
Query: 217 DNGCIHDPITFETIISALFEKGENDKA 243
G ++ ++ L E G+ ++A
Sbjct: 601 SCGIKPSLMSCNIVVGMLCENGKMEEA 627
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 138/272 (50%), Gaps = 32/272 (11%)
Query: 2 LAVMMKQGVKPNVVTYNSLMDGYCLVNEV-NKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
L+ M GV P+ +NSL+ + + V ++ +++ M GV PDV + +++I+ C
Sbjct: 81 LSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFC 140
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K+ ++ A++LL+ + I +T+TYN++I GLC+ G A++ L EM G D +
Sbjct: 141 KVGRLSFAISLLR---NRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTV 197
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVID----------------------------KGIQP 152
+YN+ +D CK + + AL+ ++ + G P
Sbjct: 198 SYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDP 257
Query: 153 DMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLM 212
D+ T++ +++ LCK G++ + + +++ + N+ TY T+++ L K ++ AL L
Sbjct: 258 DVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALY 317
Query: 213 SKMEDNGCIHDPITFETIISALFEKGENDKAE 244
S+M G D + + ++ LF+ G+ +AE
Sbjct: 318 SQMVVRGIPVDLVVYTVLMDGLFKAGDLREAE 349
Score = 113 bits (283), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 129/235 (54%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ +G+ ++V Y LMDG ++ +A+ F + + P+V++Y+ +++GLCK
Sbjct: 320 MVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGD 379
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++ A ++ QM + +IPN +TY+S+I+G K G + A LL +M + + TY +
Sbjct: 380 LSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGT 439
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D L K + I L K++ G++ + + L++ L + GRIK+ + + +D+ KG
Sbjct: 440 VIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKG 499
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
L+ Y ++I+ K G + AL +M++ G D +++ +IS + + G+
Sbjct: 500 VTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGK 554
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 130/275 (47%), Gaps = 35/275 (12%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M ++G++P++ T+N +M+ + +++ M G+ P ++S +I++ LC+
Sbjct: 564 MREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGK 623
Query: 65 VNEALNLLKQMHSEKIIPNTITY-----------------------------------NS 89
+ EA+++L QM +I PN TY N+
Sbjct: 624 MEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNT 683
Query: 90 LIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKG 149
LI LCK G A ++ +M RG D +T+NS + G HV K ++ +++ G
Sbjct: 684 LIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAG 743
Query: 150 IQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEAL 209
I P++ TYN ++ GL G IK+ + ++ +G +++TYN +I+G K G ++
Sbjct: 744 ISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSM 803
Query: 210 TLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
T+ +M +G + T+ +IS G+ +A
Sbjct: 804 TIYCEMIADGLVPKTSTYNVLISEFANVGKMLQAR 838
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 101/197 (51%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
++ G+K + YN+L+ C + KA V M G PD ++++ +++G
Sbjct: 669 LLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSH 728
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V +AL+ M I PN TYN++I GL G + + L EM RG D TYN+
Sbjct: 729 VRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNA 788
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ K ++ + + ++I G+ P TYN+L+ G++ A+E+ +++ K+G
Sbjct: 789 LISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRG 848
Query: 185 YNLNNWTYNTMINGLCK 201
+ N TY TMI+GLCK
Sbjct: 849 VSPNTSTYCTMISGLCK 865
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 114/240 (47%), Gaps = 12/240 (5%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLS---YSIMIN 57
+L MM + PN+ TY +D ++ +A A+F T + + LS Y+ +I
Sbjct: 630 ILNQMMLMEIHPNLTTYRIFLD---TSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIA 686
Query: 58 GLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPA 117
LCK+ M +A ++ M + IP+T+T+NSL+ G V A M G
Sbjct: 687 TLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISP 746
Query: 118 DIITYNSFLDALCKG---HHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQ 174
++ TYN+ + L VDK ++ +K +G++PD TYN L+ G K G +K +
Sbjct: 747 NVATYNTIIRGLSDAGLIKEVDKWLSEMK---SRGMRPDDFTYNALISGQAKIGNMKGSM 803
Query: 175 EVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
++ ++ G TYN +I+ G +A L+ +M G + T+ T+IS L
Sbjct: 804 TIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGL 863
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 19/197 (9%)
Query: 3 AVMMKQGVKPNVVTYNSLMDGYC---LVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGL 59
+VMM+ G+ PNV TYN+++ G L+ EV+K + M G+ PD +Y+ +I+G
Sbjct: 737 SVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKW---LSEMKSRGMRPDDFTYNALISGQ 793
Query: 60 CKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADI 119
K+ + ++ + +M ++ ++P T TYN LI GK+ A ELL EM RG +
Sbjct: 794 AKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNT 853
Query: 120 ITYNSFLDALC------------KGHHVDKGIALIKKVI-DKGIQPDMCTYNILLDGLCK 166
TY + + LC K ++ + L+K+++ +KG P T + K
Sbjct: 854 STYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYIPCNQTIYWISAAFSK 913
Query: 167 CGRIKDAQEVFQDLFKK 183
G DA+ ++ +KK
Sbjct: 914 PGMKVDAERFLKECYKK 930
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 54/95 (56%)
Query: 2 LAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCK 61
L+ M +G++P+ TYN+L+ G + + + ++ M G+ P +Y+++I+
Sbjct: 771 LSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFAN 830
Query: 62 MKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCK 96
+ + +A LLK+M + PNT TY ++I GLCK
Sbjct: 831 VGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 865
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 160 bits (406), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 88/244 (36%), Positives = 140/244 (57%), Gaps = 1/244 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M K G+ PN VTYN+L+ GYC + + +A + M Q V PD+ +Y+I+INGLC
Sbjct: 262 LLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLC 321
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ E L L+ M S K+ P+ +TYN+LIDG + G A +L+++M G A+ +
Sbjct: 322 NAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQV 381
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVID-KGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
T+N L LCK + +K+++D G PD+ TY+ L+ K G + A E+ ++
Sbjct: 382 THNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMRE 441
Query: 180 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
+ +KG +N T NT+++ LCKE DEA L++ G I D +T+ T+I F + +
Sbjct: 442 MGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEK 501
Query: 240 NDKA 243
+KA
Sbjct: 502 VEKA 505
Score = 148 bits (373), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 128/239 (53%), Gaps = 1/239 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M+ M ++G+K N +T N+++D C ++++A + N+ + G D ++Y +I G
Sbjct: 438 MMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFF 497
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + V +AL + +M KI P T+NSLI GLC GK A E DE+ G D
Sbjct: 498 REEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDS 557
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
T+NS + CK V+K + I +PD T NILL+GLCK G + A F L
Sbjct: 558 TFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL 617
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
++ ++ TYNTMI+ CK+ EA L+S+ME+ G D T+ + IS L E G+
Sbjct: 618 IEE-REVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGK 675
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 130/229 (56%), Gaps = 5/229 (2%)
Query: 8 QGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNE 67
G P++VTY++L+ Y V +++ A + M Q G+ + ++ + +++ LCK + ++E
Sbjct: 410 HGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDE 469
Query: 68 ALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 127
A NLL H I + +TY +LI G + KV A E+ DEM + T+NS +
Sbjct: 470 AHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIG 529
Query: 128 ALCKGHHVDKGIALIK--KVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 185
LC HH +A+ K ++ + G+ PD T+N ++ G CK GR++ A E + + K +
Sbjct: 530 GLC--HHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSF 587
Query: 186 NLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
+N+T N ++NGLCKEG+ ++AL + + + + D +T+ T+ISA
Sbjct: 588 KPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAF 635
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 136/226 (60%), Gaps = 4/226 (1%)
Query: 5 MMKQGVKPNVVTYNSLMDG---YCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCK 61
M++ +KPN++T N+L+ G Y ++ A+ VF+ M ++GV +V ++++++NG C
Sbjct: 157 MIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCL 216
Query: 62 MKMVNEALNLLKQMHSE-KIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ +AL +L++M SE K+ P+ +TYN+++ + K G++S+ ELL +M G + +
Sbjct: 217 EGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRV 276
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN+ + CK + + +++ + + PD+CTYNIL++GLC G +++ E+ +
Sbjct: 277 TYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAM 336
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPIT 226
+ TYNT+I+G + GL EA LM +ME++G + +T
Sbjct: 337 KSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVT 382
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 129/237 (54%), Gaps = 2/237 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTM-TQMGVFPDVLSYSIMINGLCKMK 63
M+K GV NV T+N L++GYCL ++ A + M ++ V PD ++Y+ ++ + K
Sbjct: 195 MVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKG 254
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
+++ LL M ++PN +TYN+L+ G CK G + A+++++ M D+ TYN
Sbjct: 255 RLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYN 314
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
++ LC + +G+ L+ + +QPD+ TYN L+DG + G +A+++ + +
Sbjct: 315 ILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMEND 374
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMED-NGCIHDPITFETIISALFEKGE 239
G N T+N + LCKE + + ++ D +G D +T+ T+I A + G+
Sbjct: 375 GVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGD 431
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 95/196 (48%), Gaps = 24/196 (12%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
+ + G+ P+ T+NS++ GYC V KA +N + PD + +I++NGLCK M
Sbjct: 547 LAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGM 606
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ALN + E+ + +T+TYN++I CK K+ A++LL EM +G D TYNS
Sbjct: 607 TEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNS 665
Query: 125 FLDALCKGHHVDKGIALIKKVIDK-----------------------GIQPDMCTYNILL 161
F+ L + + + L+KK K + + Y+ ++
Sbjct: 666 FISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVI 725
Query: 162 DGLCKCGRIKDAQEVF 177
D LC GR+K+ +
Sbjct: 726 DELCSRGRLKEHSRSY 741
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 88/174 (50%), Gaps = 1/174 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M K + P V T+NSL+ G C + A F+ + + G+ PD +++ +I G CK
Sbjct: 512 MKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGR 571
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V +A + P+ T N L++GLCK G A + + + + D +TYN+
Sbjct: 572 VEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL-IEEREVDTVTYNT 630
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 178
+ A CK + + L+ ++ +KG++PD TYN + L + G++ + E+ +
Sbjct: 631 MISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLK 684
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 94/175 (53%), Gaps = 4/175 (2%)
Query: 68 ALNLLKQMHSEKIIPNTITYNSLIDGLCK---TGKVSNAWELLDEMHVRGQPADIITYNS 124
AL + ++M K+ PN +T N+L+ GL + + +S+A E+ D+M G ++ T+N
Sbjct: 150 ALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNV 209
Query: 125 FLDALCKGHHVDKGIALIKKVIDK-GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
++ C ++ + ++++++ + + PD TYN +L + K GR+ D +E+ D+ K
Sbjct: 210 LVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKN 269
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
G N TYN ++ G CK G EA ++ M+ + D T+ +I+ L G
Sbjct: 270 GLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAG 324
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 160 bits (405), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 141/244 (57%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+LA MMK G +P++VT +SL++GYC ++ A A+ + M +MG PD +++ +I+GL
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+EA+ L+ QM P+ +TY ++++GLCK G + A LL++M A+++
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVV 259
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
+N+ +D+LCK HV+ + L ++ KGI+P++ TYN L++ LC GR DA + ++
Sbjct: 260 IFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM 319
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+K N N T+N +I+ KEG EA L +M D IT+ +I+
Sbjct: 320 LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRL 379
Query: 241 DKAE 244
D+A+
Sbjct: 380 DEAK 383
Score = 157 bits (398), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 144/240 (60%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+++G +P++VTY ++++G C +++ A + N M + +V+ ++ +I+ LCK +
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRH 273
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V A++L +M ++ I PN +TYNSLI+ LC G+ S+A LL M + +++T+N+
Sbjct: 274 VEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNA 333
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+DA K + + L +++I + I PD TYN+L++G C R+ +A+++F+ + K
Sbjct: 334 LIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD 393
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
N TYNT+ING CK ++ + L +M G + + +T+ TII F+ G+ D A+
Sbjct: 394 CLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQ 453
Score = 152 bits (385), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 133/237 (56%), Gaps = 3/237 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L+ M+++ + PNVVT+N+L+D + ++ +A+ + M Q + PD ++Y+++ING C
Sbjct: 315 LLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFC 374
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++EA + K M S+ +PN TYN+LI+G CK +V + EL EM RG + +
Sbjct: 375 MHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV 434
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY + + + D + K+++ + D+ TY+ILL GLC G++ A +F+ L
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL 494
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK 237
K LN + YNTMI G+CK G EA L + D +T+ T+IS L K
Sbjct: 495 QKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMISGLCSK 548
Score = 151 bits (381), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 133/243 (54%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M +K NVV +N+++D C V A +F M G+ P+V++Y+ +IN LC
Sbjct: 245 LLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLC 304
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++A LL M +KI PN +T+N+LID K GK+ A +L +EM R D I
Sbjct: 305 NYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTI 364
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN ++ C + +D+ + K ++ K P++ TYN L++G CKC R++D E+F+++
Sbjct: 365 TYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREM 424
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
++G N TY T+I G + G D A + +M N D +T+ ++ L G+
Sbjct: 425 SQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKL 484
Query: 241 DKA 243
D A
Sbjct: 485 DTA 487
Score = 141 bits (355), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 138/240 (57%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M G+ ++ TY+ ++ +C ++++ A AV M ++G PD+++ S ++NG C K
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+++A+ L+ QM P+T T+ +LI GL K S A L+D+M RG D++TY +
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++ LCK +D + L+ K+ I+ ++ +N ++D LCK ++ A ++F ++ KG
Sbjct: 229 VVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG 288
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
N TYN++IN LC G + +A L+S M + + +TF +I A F++G+ +AE
Sbjct: 289 IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAE 348
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 134/271 (49%), Gaps = 33/271 (12%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+++ + P+ +TYN L++G+C+ N +++A+ +F M P++ +Y+ +ING CK K
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V + + L ++M ++ NT+TY ++I G + G +A + +M P DI+TY+
Sbjct: 414 VEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSI 473
Query: 125 FLDALCKGHHVDKGIALIKKVIDK--------------------------------GIQP 152
L LC +D + + K + I+P
Sbjct: 474 LLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKP 533
Query: 153 DMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLM 212
D+ TYN ++ GLC +++A ++F+ + + G N+ TYNT+I ++ + L+
Sbjct: 534 DVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELI 593
Query: 213 SKMEDNGCIHDPITFETIISALFEKGENDKA 243
+M +G + D T ++++ + G DK+
Sbjct: 594 KEMRSSGFVGDASTI-SLVTNMLHDGRLDKS 623
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 110/206 (53%)
Query: 29 EVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYN 88
+V+ A +F M + FP ++ ++ +++ + KM ++L +QM + I + TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 89 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDK 148
I+ C+ ++S A +L +M G DI+T +S L+ C + +AL+ ++++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 149 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 208
G +PD T+ L+ GL + +A + + ++G + TY T++NGLCK G D A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 209 LTLMSKMEDNGCIHDPITFETIISAL 234
L L++KME + + F TII +L
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSL 268
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 102/190 (53%)
Query: 54 IMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVR 113
I+ N L + V++A++L M + P+ + +N L+ + K K L ++M
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 114 GQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDA 173
G D+ TY+ F++ C+ + +A++ K++ G +PD+ T + LL+G C RI DA
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 174 QEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
+ + + GY + +T+ T+I+GL EA+ L+ +M GC D +T+ T+++
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 234 LFEKGENDKA 243
L ++G+ D A
Sbjct: 233 LCKRGDIDLA 242
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 133/238 (55%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+LA+M+K+G NV +N L+ G C E KA ++ M + + PDV SY+ +I G C
Sbjct: 129 VLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFC 188
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ K + +AL L +M + +T+ LID CK GK+ A L EM G AD++
Sbjct: 189 EGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLV 248
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
Y S + C +D+G AL +V+++G P TYN L+ G CK G++K+A E+F+ +
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFM 308
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
++G N +TY +I+GLC G EAL L++ M + + +T+ II+ L + G
Sbjct: 309 IERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDG 366
Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 137/244 (56%), Gaps = 2/244 (0%)
Query: 1 MLAVMMKQG--VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMING 58
+L +M+K P+V++YN+L+ G C N +++A +++ + + D ++ +I++N
Sbjct: 409 LLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNS 468
Query: 59 LCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPAD 118
K VN+A+ L KQ+ KI+ N+ TY ++IDG CKTG ++ A LL +M V
Sbjct: 469 TLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPS 528
Query: 119 IITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 178
+ YN L +LCK +D+ L +++ PD+ ++NI++DG K G IK A+ +
Sbjct: 529 VFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLV 588
Query: 179 DLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
+ + G + + +TY+ +IN K G DEA++ KM D+G D ++++ +G
Sbjct: 589 GMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQG 648
Query: 239 ENDK 242
E DK
Sbjct: 649 ETDK 652
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 134/245 (54%), Gaps = 2/245 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
L M G++ ++V Y SL+ G+C E+++ +A+F+ + + G P ++Y+ +I G C
Sbjct: 234 FLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFC 293
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K+ + EA + + M + PN TY LIDGLC GK A +LL+ M + + + +
Sbjct: 294 KLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAV 353
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN ++ LCK V + +++ + + +PD TYNILL GLC G + +A ++ +
Sbjct: 354 TYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM 413
Query: 181 FKKGY--NLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
K + + +YN +I+GLCKE +AL + + + D +T ++++ + G
Sbjct: 414 LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAG 473
Query: 239 ENDKA 243
+ +KA
Sbjct: 474 DVNKA 478
Score = 134 bits (337), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 134/245 (54%), Gaps = 2/245 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ M+++GV+PNV TY L+DG C V + +A + N M + P+ ++Y+I+IN LC
Sbjct: 304 IFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLC 363
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQ--PAD 118
K +V +A+ +++ M + P+ ITYN L+ GLC G + A +LL M D
Sbjct: 364 KDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPD 423
Query: 119 IITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 178
+I+YN+ + LCK + + + + + +++K D T NILL+ K G + A E+++
Sbjct: 424 VISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWK 483
Query: 179 DLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
+ N+ TY MI+G CK G+ + A L+ KM + + ++S+L ++G
Sbjct: 484 QISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEG 543
Query: 239 ENDKA 243
D+A
Sbjct: 544 SLDQA 548
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 122/232 (52%), Gaps = 2/232 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M G ++VT+ L+D +C ++++A M MG+ D++ Y+ +I G C
Sbjct: 203 MKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGE 262
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++ L ++ P ITYN+LI G CK G++ A E+ + M RG ++ TY
Sbjct: 263 LDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTG 322
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D LC + + L+ +I+K +P+ TYNI+++ LCK G + DA E+ + + K+
Sbjct: 323 LIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRR 382
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDP--ITFETIISAL 234
+N TYN ++ GLC +G DEA L+ M + DP I++ +I L
Sbjct: 383 TRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGL 434
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 126/239 (52%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ N V+ + L++ Y + + A V M + G +V +++I++ GLC+
Sbjct: 98 MLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLE 157
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+A++LL++M ++P+ +YN++I G C+ ++ A EL +EM G ++T+
Sbjct: 158 CGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGI 217
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+DA CK +D+ + +K++ G++ D+ Y L+ G C CG + + +F ++ ++G
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ TYNT+I G CK G EA + M + G + T+ +I L G+ +A
Sbjct: 278 DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEA 336
Score = 120 bits (301), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 128/246 (52%), Gaps = 2/246 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L +M+++ +PN VTYN +++ C V A + M + PD ++Y+I++ GLC
Sbjct: 339 LLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLC 398
Query: 61 KMKMVNEALNLLKQM--HSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPAD 118
++EA LL M S P+ I+YN+LI GLCK ++ A ++ D + + D
Sbjct: 399 AKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGD 458
Query: 119 IITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 178
+T N L++ K V+K + L K++ D I + TY ++DG CK G + A+ +
Sbjct: 459 RVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLC 518
Query: 179 DLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
+ + + YN +++ LCKEG D+A L +M+ + D ++F +I + G
Sbjct: 519 KMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAG 578
Query: 239 ENDKAE 244
+ AE
Sbjct: 579 DIKSAE 584
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 103/209 (49%)
Query: 15 VTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQ 74
VT N L++ +VNKA ++ ++ + + +Y+ MI+G CK M+N A LL +
Sbjct: 460 VTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCK 519
Query: 75 MHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 134
M ++ P+ YN L+ LCK G + AW L +EM D++++N +D K
Sbjct: 520 MRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGD 579
Query: 135 VDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 194
+ +L+ + G+ PD+ TY+ L++ K G + +A F + G+ + ++
Sbjct: 580 IKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDS 639
Query: 195 MINGLCKEGLFDEALTLMSKMEDNGCIHD 223
++ +G D+ L+ K+ D + D
Sbjct: 640 VLKYCISQGETDKLTELVKKLVDKDIVLD 668
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 94/188 (50%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
N TY +++DG+C +N A+ + M + P V Y+ +++ LCK +++A L
Sbjct: 493 NSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLF 552
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 132
++M + P+ +++N +IDG K G + +A LL M G D+ TY+ ++ K
Sbjct: 553 EEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKL 612
Query: 133 HHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 192
++D+ I+ K++D G +PD + +L G E+ + L K L+
Sbjct: 613 GYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELT 672
Query: 193 NTMINGLC 200
T+++ +C
Sbjct: 673 CTVMDYMC 680
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 95/211 (45%)
Query: 33 AQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLID 92
A + + M + F + +S S ++ +M+ A +L M N +N L+
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150
Query: 93 GLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQP 152
GLC+ + A LL EM D+ +YN+ + C+G ++K + L ++ G
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSW 210
Query: 153 DMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLM 212
+ T+ IL+D CK G++ +A +++ G + Y ++I G C G D L
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270
Query: 213 SKMEDNGCIHDPITFETIISALFEKGENDKA 243
++ + G IT+ T+I + G+ +A
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGQLKEA 301
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M ++P+V YN L+ C +++A +F M + FPDV+S++IMI+G
Sbjct: 516 LLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSL 575
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + A +LL M + P+ TY+ LI+ K G + A D+M G D
Sbjct: 576 KAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAH 635
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLC 165
+S L DK L+KK++DK I D ++D +C
Sbjct: 636 ICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMC 680
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 88/177 (49%)
Query: 68 ALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 127
A + ++M N ++ + L++ + K A+ +L M RG ++ +N L
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150
Query: 128 ALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
LC+ K ++L++++ + PD+ +YN ++ G C+ ++ A E+ ++ G +
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSW 210
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ T+ +I+ CK G DEA+ + +M+ G D + + ++I + GE D+ +
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGK 267
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 158 bits (399), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 142/240 (59%), Gaps = 1/240 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L + + G PNVV Y +L+DG C E+ KA+ +F M ++G+ + +Y+++INGL
Sbjct: 185 LLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLF 244
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + + + ++M + + PN TYN +++ LCK G+ +A+++ DEM RG +I+
Sbjct: 245 KNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIV 304
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN+ + LC+ +++ ++ ++ GI P++ TYN L+DG C G++ A + +DL
Sbjct: 305 TYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDL 364
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+G + + TYN +++G C++G A ++ +ME+ G +T+ TI+ F + +N
Sbjct: 365 KSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTY-TILIDTFARSDN 423
Score = 154 bits (388), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 140/240 (58%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M ++GV N+VTYN+L+ G C ++N+A V + M G+ P++++Y+ +I+G C +
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK 353
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ +AL+L + + S + P+ +TYN L+ G C+ G S A +++ EM RG +TY
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D + +++K I L + + G+ PD+ TY++L+ G C G++ +A +F+ + +K
Sbjct: 414 LIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN 473
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
N YNTMI G CKEG AL L+ +ME+ + ++ +I L ++ ++ +AE
Sbjct: 474 CEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAE 533
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 127/237 (53%), Gaps = 5/237 (2%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M G+ PN++TYN+L+DG+C V ++ KA ++ + G+ P +++Y+I+++G C+
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGD 388
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ A ++K+M I P+ +TY LID ++ + A +L M G D+ TY+
Sbjct: 389 TSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSV 448
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ C +++ L K +++K +P+ YN ++ G CK G A ++ +++ +K
Sbjct: 449 LIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKE 508
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
N +Y MI LCKE EA L+ KM D+G DP T I +L + +ND
Sbjct: 509 LAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGI--DP---STSILSLISRAKND 560
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 130/239 (54%), Gaps = 1/239 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ G P +N L+ + N+ + FN + V DV S+ I+I G C+
Sbjct: 120 MVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-NKSKVVLDVYSFGILIKGCCEAGE 178
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ ++ +LL ++ PN + Y +LIDG CK G++ A +L EM G A+ TY
Sbjct: 179 IEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTV 238
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++ L K +G + +K+ + G+ P++ TYN +++ LCK GR KDA +VF ++ ++G
Sbjct: 239 LINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERG 298
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ N TYNT+I GLC+E +EA ++ +M+ +G + IT+ T+I G+ KA
Sbjct: 299 VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKA 357
Score = 123 bits (309), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 123/237 (51%)
Query: 7 KQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVN 66
K V +V ++ L+ G C E+ K+ + +T+ G P+V+ Y+ +I+G CK +
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 67 EALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 126
+A +L +M ++ N TY LI+GL K G +E+ ++M G ++ TYN +
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 127 DALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 186
+ LCK + ++ ++G+ ++ TYN L+ GLC+ ++ +A +V + G N
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 187 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
N TYNT+I+G C G +AL+L ++ G +T+ ++S KG+ A
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGA 392
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 87/153 (56%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M+ M ++G+KP+ VTY L+D + + + KA + +M ++G+ PDV +YS++I+G C
Sbjct: 395 MVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFC 454
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+NEA L K M + PN + YN++I G CK G A +LL EM + ++
Sbjct: 455 IKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVA 514
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPD 153
+Y ++ LCK + L++K+ID GI P
Sbjct: 515 SYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS 547
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 158 bits (399), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 133/235 (56%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G P+ TY SL+DG C E N+A A+FN G+ P+V+ Y+ +I GL M+ EA
Sbjct: 351 GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEA 410
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
L +M + +IP T+N L++GLCK G VS+A L+ M +G DI T+N +
Sbjct: 411 AQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
++ + ++ ++D G+ PD+ TYN LL+GLCK + +D E ++ + +KG N
Sbjct: 471 YSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPN 530
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+T+N ++ LC+ DEAL L+ +M++ D +TF T+I + G+ D A
Sbjct: 531 LFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGA 585
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 137/233 (58%), Gaps = 1/233 (0%)
Query: 6 MKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMV 65
+ +G+KPNV+ YN+L+ G + +A + N M++ G+ P+V +++I++NGLCKM V
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCV 442
Query: 66 NEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 125
++A L+K M S+ P+ T+N LI G K+ NA E+LD M G D+ TYNS
Sbjct: 443 SDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSL 502
Query: 126 LDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 185
L+ LCK + + K +++KG P++ T+NILL+ LC+ ++ +A + +++ K
Sbjct: 503 LNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSV 562
Query: 186 NLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPI-TFETIISALFEK 237
N + T+ T+I+G CK G D A TL KME+ + T+ II A EK
Sbjct: 563 NPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEK 615
Score = 145 bits (365), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 130/242 (53%)
Query: 2 LAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCK 61
L M+ +G++P+ TYN+L+ GYC V A+ + G PD +Y +I+GLC
Sbjct: 309 LGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCH 368
Query: 62 MKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 121
N AL L + + I PN I YN+LI GL G + A +L +EM +G ++ T
Sbjct: 369 EGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQT 428
Query: 122 YNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF 181
+N ++ LCK V L+K +I KG PD+ T+NIL+ G ++++A E+ +
Sbjct: 429 FNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVML 488
Query: 182 KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
G + + +TYN+++NGLCK F++ + M + GC + TF ++ +L + D
Sbjct: 489 DNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLD 548
Query: 242 KA 243
+A
Sbjct: 549 EA 550
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 132/234 (56%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M+ +++QG KP+V+TYN+L+ G C ++ +A+ M G+ PD +Y+ +I G C
Sbjct: 273 MVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYC 332
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K MV A ++ +P+ TY SLIDGLC G+ + A L +E +G ++I
Sbjct: 333 KGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVI 392
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
YN+ + L + + L ++ +KG+ P++ T+NIL++GLCK G + DA + + +
Sbjct: 393 LYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 452
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
KGY + +T+N +I+G + + AL ++ M DNG D T+ ++++ L
Sbjct: 453 ISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGL 506
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 126/231 (54%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L ++K+GV PN+ TYN + G C E++ A + + + G PDV++Y+ +I GLC
Sbjct: 238 LLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLC 297
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K EA L +M +E + P++ TYN+LI G CK G V A ++ + G D
Sbjct: 298 KNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQF 357
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY S +D LC ++ +AL + + KGI+P++ YN L+ GL G I +A ++ ++
Sbjct: 358 TYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEM 417
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 231
+KG T+N ++NGLCK G +A L+ M G D TF +I
Sbjct: 418 SEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 125/226 (55%), Gaps = 1/226 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L VM+ GV P+V TYNSL++G C ++ + TM + G P++ +++I++ LC
Sbjct: 483 ILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLC 542
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMH-VRGQPADI 119
+ + ++EAL LL++M ++ + P+ +T+ +LIDG CK G + A+ L +M +
Sbjct: 543 RYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSST 602
Query: 120 ITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
TYN + A + +V L ++++D+ + PD TY +++DG CK G + + +
Sbjct: 603 PTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLE 662
Query: 180 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPI 225
+ + G+ + T +IN LC E EA ++ +M G + + +
Sbjct: 663 MMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 127/239 (53%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M +G+ P+V ++ M +C + + A + N M+ G +V++Y ++ G +
Sbjct: 137 MRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENF 196
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
E L +M + + T+N L+ LCK G V +LLD++ RG ++ TYN
Sbjct: 197 KAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNL 256
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
F+ LC+ +D + ++ +I++G +PD+ TYN L+ GLCK + ++A+ + +G
Sbjct: 257 FIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEG 316
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+++TYNT+I G CK G+ A ++ NG + D T+ ++I L +GE ++A
Sbjct: 317 LEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRA 375
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 121/238 (50%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ M+ GV + T+N L+ C +V + + + + + + GV P++ +Y++ I GLC
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLC 262
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ ++ A+ ++ + + P+ ITYN+LI GLCK K A L +M G D
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY 322
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN+ + CKG V ++ + G PD TY L+DGLC G A +F +
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA 382
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
KG N YNT+I GL +G+ EA L ++M + G I + TF +++ L + G
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMG 440
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 127/238 (53%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M QG + NVV Y +++ G+ N + +F M GV + +++ ++ LC
Sbjct: 168 LLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLC 227
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K V E LL ++ ++PN TYN I GLC+ G++ A ++ + +G D+I
Sbjct: 228 KKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVI 287
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN+ + LCK + + K++++G++PD TYN L+ G CK G ++ A+ + D
Sbjct: 288 TYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDA 347
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
G+ + +TY ++I+GLC EG + AL L ++ G + I + T+I L +G
Sbjct: 348 VFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQG 405
Score = 128 bits (321), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 129/266 (48%), Gaps = 36/266 (13%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M ++G+ P V T+N L++G C + V+ A + M G FPD+ +++I+I+G
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLK 476
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ AL +L M + P+ TYNSL++GLCKT K + E M +G ++ T+N
Sbjct: 477 MENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNI 536
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCG---------------- 168
L++LC+ +D+ + L++++ +K + PD T+ L+DG CK G
Sbjct: 537 LLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAY 596
Query: 169 --------------------RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 208
+ A+++FQ++ + + +TY M++G CK G +
Sbjct: 597 KVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLG 656
Query: 209 LTLMSKMEDNGCIHDPITFETIISAL 234
+ +M +NG I T +I+ L
Sbjct: 657 YKFLLEMMENGFIPSLTTLGRVINCL 682
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 117/234 (50%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALN 70
+P V +YN++M ++A V+ M G+ PDV S++I + CK + AL
Sbjct: 108 EPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALR 167
Query: 71 LLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 130
LL M S+ N + Y +++ G + + +EL +M G + T+N L LC
Sbjct: 168 LLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLC 227
Query: 131 KGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 190
K V + L+ KVI +G+ P++ TYN+ + GLC+ G + A + L ++G +
Sbjct: 228 KKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVI 287
Query: 191 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
TYN +I GLCK F EA + KM + G D T+ T+I+ + G AE
Sbjct: 288 TYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAE 341
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 109/229 (47%)
Query: 16 TYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQM 75
Y M Y +V +A VF M P V SY+ +++ L ++A + +M
Sbjct: 78 VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM 137
Query: 76 HSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHV 135
I P+ ++ + CKT + A LL+ M +G +++ Y + + + +
Sbjct: 138 RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFK 197
Query: 136 DKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTM 195
+G L K++ G+ + T+N LL LCK G +K+ +++ + K+G N +TYN
Sbjct: 198 AEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLF 257
Query: 196 INGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
I GLC+ G D A+ ++ + + G D IT+ +I L + + +AE
Sbjct: 258 IQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAE 306
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 99/202 (49%), Gaps = 10/202 (4%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQM-GVFPDVLSYSIMINGL 59
+L M + V P+ VT+ +L+DG+C +++ A +F M + V +Y+I+I+
Sbjct: 553 LLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAF 612
Query: 60 CKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADI 119
+ V A L ++M + P+ TY ++DG CKTG V+ ++ L EM G +
Sbjct: 613 TEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSL 672
Query: 120 ITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGR--IKDAQEVF 177
T ++ LC V + +I +++ KG+ P+ ++ +C + + + V
Sbjct: 673 TTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA------VNTICDVDKKEVAAPKLVL 726
Query: 178 QDLFKKGYNLNNWTYNTMINGL 199
+DL KK + + Y + +GL
Sbjct: 727 EDLLKKS-CITYYAYELLFDGL 747
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 155 bits (392), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 134/233 (57%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALN 70
+P+V YN+L++G+C +N ++ A V + M PD ++Y+IMI LC ++ AL
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 71 LLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 130
+L Q+ S+ P ITY LI+ G V A +L+DEM RG D+ TYN+ + +C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 131 KGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 190
K VD+ +++ + KG +PD+ +YNILL L G+ ++ +++ +F + + N
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 191 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
TY+ +I LC++G +EA+ L+ M++ G D +++ +I+A +G D A
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 387
Score = 149 bits (375), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 131/239 (54%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ +G+KP++ TYN+++ G C V++A + + G PDV+SY+I++ L
Sbjct: 254 MLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGK 313
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
E L+ +M SEK PN +TY+ LI LC+ GK+ A LL M +G D +Y+
Sbjct: 314 WEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDP 373
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ A C+ +D I ++ +I G PD+ YN +L LCK G+ A E+F L + G
Sbjct: 374 LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 433
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ N+ +YNTM + L G AL ++ +M NG D IT+ ++IS L +G D+A
Sbjct: 434 CSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEA 492
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 124/243 (51%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
++ M + PNVVTY+ L+ C ++ +A + M + G+ PD SY +I C
Sbjct: 320 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 379
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ ++ A+ L+ M S+ +P+ + YN+++ LCK GK A E+ ++ G +
Sbjct: 380 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 439
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
+YN+ AL + + +I +++ GI PD TYN ++ LC+ G + +A E+ D+
Sbjct: 440 SYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM 499
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
++ + TYN ++ G CK ++A+ ++ M NGC + T+ +I + G
Sbjct: 500 RSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYR 559
Query: 241 DKA 243
+A
Sbjct: 560 AEA 562
Score = 121 bits (303), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 118/210 (56%), Gaps = 3/210 (1%)
Query: 36 VFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKI-IPNTITYNSLIDGL 94
+ TM + G PDV+ + +I G ++ + +A+ +++ + EK P+ YN+LI+G
Sbjct: 111 LLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEIL--EKFGQPDVFAYNALINGF 168
Query: 95 CKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDM 154
CK ++ +A +LD M + D +TYN + +LC +D + ++ +++ QP +
Sbjct: 169 CKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTV 228
Query: 155 CTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSK 214
TY IL++ G + +A ++ ++ +G + +TYNT+I G+CKEG+ D A ++
Sbjct: 229 ITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRN 288
Query: 215 MEDNGCIHDPITFETIISALFEKGENDKAE 244
+E GC D I++ ++ AL +G+ ++ E
Sbjct: 289 LELKGCEPDVISYNILLRALLNQGKWEEGE 318
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 107/211 (50%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L +M ++G+ P+ +Y+ L+ +C ++ A TM G PD+++Y+ ++ LC
Sbjct: 355 LLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLC 414
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K ++AL + ++ PN+ +YN++ L +G A ++ EM G D I
Sbjct: 415 KNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEI 474
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYNS + LC+ VD+ L+ + P + TYNI+L G CK RI+DA V + +
Sbjct: 475 TYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESM 534
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTL 211
G N TY +I G+ G EA+ L
Sbjct: 535 VGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 99/182 (54%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
L M+ G P++V YN+++ C + ++A +F + ++G P+ SY+ M + L
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
AL+++ +M S I P+ ITYNS+I LC+ G V A+ELL +M ++
Sbjct: 450 SSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVV 509
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN L CK H ++ I +++ ++ G +P+ TY +L++G+ G +A E+ DL
Sbjct: 510 TYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Query: 181 FK 182
+
Sbjct: 570 VR 571
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 1/171 (0%)
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 132
+Q HS+ + + C++G + LL+ M +G D+I +
Sbjct: 78 RQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTL 137
Query: 133 HHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 192
++ K + ++ ++++K QPD+ YN L++G CK RI DA V + K ++ + TY
Sbjct: 138 RNIPKAVRVM-EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTY 196
Query: 193 NTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
N MI LC G D AL +++++ + C IT+ +I A +G D+A
Sbjct: 197 NIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEA 247
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 155 bits (392), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 140/240 (58%), Gaps = 2/240 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ Q VKPNV++YNSL++G C ++++A ++ + M GV P++++Y+ +ING CK M
Sbjct: 322 MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDM 381
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ EAL++ + + +P T YN LID CK GK+ + + L +EM G D+ TYN
Sbjct: 382 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ LC+ +++ L ++ KG+ PD+ T++IL++G C+ G + A + +++ K G
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMG 500
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIH-DPITFETIISALFEKGENDKA 243
+ TYN ++ G CKEG A + ++ME + + ++ ++ +KG+ + A
Sbjct: 501 LKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDA 560
Score = 152 bits (383), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 137/238 (57%), Gaps = 4/238 (1%)
Query: 9 GVKPNVVTYNSLMDGYCLVN---EVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMV 65
G PNVV+YN+L+DGYC + ++ KA AV M + V P++ +++I+I+G K +
Sbjct: 253 GCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNL 312
Query: 66 NEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 125
++ + K+M + + PN I+YNSLI+GLC GK+S A + D+M G ++ITYN+
Sbjct: 313 PGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNAL 372
Query: 126 LDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 185
++ CK + + + + V +G P YN+L+D CK G+I D + +++ ++G
Sbjct: 373 INGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGI 432
Query: 186 NLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ TYN +I GLC+ G + A L ++ G + D +TF ++ KGE+ KA
Sbjct: 433 VPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKA 489
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 138/244 (56%), Gaps = 5/244 (2%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKM-- 62
M+++ ++PNV T+N +++ C ++NKA+ V M G P+V+SY+ +I+G CK+
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGG 273
Query: 63 --KMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
KM +A +LK+M + PN T+N LIDG K + + ++ EM + ++I
Sbjct: 274 NGKMY-KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVI 332
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
+YNS ++ LC G + + I++ K++ G+QP++ TYN L++G CK +K+A ++F +
Sbjct: 333 SYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSV 392
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+G YN +I+ CK G D+ L +ME G + D T+ +I+ L G
Sbjct: 393 KGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNI 452
Query: 241 DKAE 244
+ A+
Sbjct: 453 EAAK 456
Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 139/235 (59%), Gaps = 2/235 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ GV+PN++TYN+L++G+C + + +A +F ++ G P Y+++I+ CK+
Sbjct: 357 MVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGK 416
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+++ L ++M E I+P+ TYN LI GLC+ G + A +L D++ +G P D++T++
Sbjct: 417 IDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHI 475
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK-K 183
++ C+ K L+K++ G++P TYNI++ G CK G +K A + + K +
Sbjct: 476 LMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKER 535
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
+N +YN ++ G ++G ++A L+++M + G + + IT+E + + ++G
Sbjct: 536 RLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQG 590
Score = 140 bits (354), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 135/238 (56%), Gaps = 1/238 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M++ V PN+ T+N L+DG+ + + + VF M V P+V+SY+ +INGLC
Sbjct: 283 VLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLC 342
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++EA+++ +M S + PN ITYN+LI+G CK + A ++ + +G
Sbjct: 343 NGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTR 402
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
YN +DA CK +D G AL +++ +GI PD+ TYN L+ GLC+ G I+ A+++F L
Sbjct: 403 MYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQL 462
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
KG + T++ ++ G C++G +A L+ +M G +T+ ++ ++G
Sbjct: 463 TSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEG 519
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 100/165 (60%), Gaps = 3/165 (1%)
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK- 131
K+M KI PN T+N +I+ LCKTGK++ A +++++M V G ++++YN+ +D CK
Sbjct: 212 KEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKL 271
Query: 132 --GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 189
+ K A++K++++ + P++ T+NIL+DG K + + +VF+++ + N
Sbjct: 272 GGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNV 331
Query: 190 WTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
+YN++INGLC G EA+++ KM G + IT+ +I+
Sbjct: 332 ISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGF 376
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 92/171 (53%), Gaps = 2/171 (1%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M ++G+ P+V TYN L+ G C + A+ +F+ +T G+ PD++++ I++ G C+
Sbjct: 427 MEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGE 485
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHV-RGQPADIITYN 123
+A LLK+M + P +TYN ++ G CK G + A + +M R ++ +YN
Sbjct: 486 SRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYN 545
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQ 174
L + ++ L+ ++++KG+ P+ TY I+ + + G + D +
Sbjct: 546 VLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIE 596
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 11/177 (6%)
Query: 72 LKQMHSEKIIPNTITYNSLIDGLCKTGK------VSNAWELLDEMHVRGQPADIITYNSF 125
K +HS S +DG + G + +A + D + V AD++
Sbjct: 105 FKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVL--- 161
Query: 126 LDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 185
A + G K+ G + + L+ L K R D + V++++ ++
Sbjct: 162 --AYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKI 219
Query: 186 NLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 242
N +T+N +IN LCK G ++A +M M+ GC + +++ T+I + G N K
Sbjct: 220 QPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGK 276
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 155 bits (391), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 143/240 (59%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+++G +P++VTY ++++G C + + A + N M + +V+ YS +I+ LCK +
Sbjct: 209 MVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 268
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++ALNL +M ++ + PN ITY+SLI LC G+ S+A LL +M R +++T+++
Sbjct: 269 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSA 328
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+DA K + K L +++I + I P++ TY+ L++G C R+ +A+++ + + +K
Sbjct: 329 LIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD 388
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
N TYNT+ING CK D+ + L +M G + + +T+ T+I F+ + D A+
Sbjct: 389 CLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 448
Score = 153 bits (387), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 122/203 (60%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L+ M+++ + PN+VT+++L+D + ++ KA+ ++ M + + P++ +YS +ING C
Sbjct: 310 LLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFC 369
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + EA +L+ M + +PN +TYN+LI+G CK +V EL EM RG + +
Sbjct: 370 MLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTV 429
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY + + + D + K+++ G+ P++ TYNILLDGLCK G++ A VF+ L
Sbjct: 430 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 489
Query: 181 FKKGYNLNNWTYNTMINGLCKEG 203
+ + +TYN MI G+CK G
Sbjct: 490 QRSTMEPDIYTYNIMIEGMCKAG 512
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 138/239 (57%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ G KP+ VT+ +L+ G L N+ ++A A+ + M Q G PD+++Y ++NGLCK
Sbjct: 174 MVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGD 233
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ ALNLL +M + KI N + Y+++ID LCK +A L EM +G ++ITY+S
Sbjct: 234 TDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 293
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ LC L+ +I++ I P++ T++ L+D K G++ A+++++++ K+
Sbjct: 294 LISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRS 353
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ N +TY+++ING C EA ++ M C+ + +T+ T+I+ + DK
Sbjct: 354 IDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKG 412
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 134/230 (58%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
MMK G +P++VT NSL++G+C N ++ A A+ + M +MG PD ++++ +I+GL
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNK 198
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+EA+ L+ +M P+ +TY ++++GLCK G A LL++M A+++ Y++
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D+LCK H D + L ++ +KG++P++ TY+ L+ LC GR DA + D+ ++
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK 318
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
N N T++ +I+ K+G +A L +M + T+ ++I+
Sbjct: 319 INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGF 368
Score = 130 bits (327), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 130/243 (53%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M ++ NVV Y++++D C + A +F M GV P+V++YS +I+ LC
Sbjct: 240 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 299
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++A LL M KI PN +T+++LID K GK+ A +L +EM R +I
Sbjct: 300 NYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIF 359
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY+S ++ C + + +++ +I K P++ TYN L++G CK R+ E+F+++
Sbjct: 360 TYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREM 419
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
++G N TY T+I+G + D A + +M G + +T+ ++ L + G+
Sbjct: 420 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 479
Query: 241 DKA 243
KA
Sbjct: 480 AKA 482
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 104/167 (62%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+K+ + PN+ TY+SL++G+C+++ + +A+ + M + P+V++Y+ +ING CK K
Sbjct: 349 MIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKR 408
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V++ + L ++M ++ NT+TY +LI G + NA + +M G +I+TYN
Sbjct: 409 VDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 468
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIK 171
LD LCK + K + + + + ++PD+ TYNI+++G+CK G+ K
Sbjct: 469 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 132/236 (55%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G+ N+ TYN L++ +C + ++ A A+ M ++G PD+++ + ++NG C +++A
Sbjct: 108 GISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 167
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
+ L+ QM P+T+T+ +LI GL K S A L+D M RG D++TY + ++
Sbjct: 168 VALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNG 227
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
LCK D + L+ K+ I+ ++ Y+ ++D LCK DA +F ++ KG N
Sbjct: 228 LCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 287
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
TY+++I+ LC G + +A L+S M + + +TF +I A +KG+ KAE
Sbjct: 288 VITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAE 343
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 128/239 (53%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ VM + P+++ ++ L+ +N+ + + M +G+ ++ +Y+I+IN C
Sbjct: 65 LFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFC 124
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ ++ AL LL +M P+ +T NSL++G C ++S+A L+D+M G D +
Sbjct: 125 RCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTV 184
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
T+ + + L + + +ALI +++ +G QPD+ TY +++GLCK G A + +
Sbjct: 185 TFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKM 244
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
N Y+T+I+ LCK D+AL L ++ME+ G + IT+ ++IS L G
Sbjct: 245 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGR 303
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 114/215 (53%)
Query: 29 EVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYN 88
E++ A +F M Q FP ++ +S +++ + KM + ++ ++M I N TYN
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 89 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDK 148
LI+ C+ ++S A LL +M G DI+T NS L+ C G+ + +AL+ ++++
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 149 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 208
G +PD T+ L+ GL + +A + + ++G + TY ++NGLCK G D A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 209 LTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
L L++KME + + + T+I +L + D A
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 272
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 154 bits (389), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 136/242 (56%)
Query: 2 LAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCK 61
L ++ G KPNV L+ C N + KA V M G+ PD +Y+ ++N LCK
Sbjct: 94 LESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCK 153
Query: 62 MKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 121
V A+ L+++M NT+TYN+L+ GLC G ++ + + ++ + +G + T
Sbjct: 154 RGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFT 213
Query: 122 YNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF 181
Y+ L+A K D+ + L+ ++I KG +P++ +YN+LL G CK GR DA +F++L
Sbjct: 214 YSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELP 273
Query: 182 KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
KG+ N +YN ++ LC +G ++EA +L+++M+ +T+ +I++L G +
Sbjct: 274 AKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTE 333
Query: 242 KA 243
+A
Sbjct: 334 QA 335
Score = 120 bits (302), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 120/230 (52%), Gaps = 2/230 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M G N VTYN+L+ G C++ +N++ + Q G+ P+ +YS ++ K +
Sbjct: 167 MEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERG 226
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+EA+ LL ++ + PN ++YN L+ G CK G+ +A L E+ +G A++++YN
Sbjct: 227 TDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNI 286
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK-- 182
L LC ++ +L+ ++ P + TYNIL++ L GR + A +V +++ K
Sbjct: 287 LLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGN 346
Query: 183 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIIS 232
+ + +YN +I LCKEG D + + +M C + T+ I S
Sbjct: 347 HQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGS 396
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 114/215 (53%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
++ +M+ G+ P+ Y L++ C V A + M G + ++Y+ ++ GLC
Sbjct: 128 VIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLC 187
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ +N++L ++++ + + PN TY+ L++ K A +LLDE+ V+G +++
Sbjct: 188 MLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLV 247
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
+YN L CK D +AL +++ KG + ++ +YNILL LC GR ++A + ++
Sbjct: 248 SYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEM 307
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM 215
+ TYN +IN L G ++AL ++ +M
Sbjct: 308 DGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEM 342
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 112/271 (41%), Gaps = 40/271 (14%)
Query: 8 QGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNE 67
+G K NVV+YN L+ C +A ++ M P V++Y+I+IN L +
Sbjct: 275 KGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQ 334
Query: 68 ALNLLKQMH--SEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN-- 123
AL +LK+M + + +YN +I LCK GKV + LDEM R + TYN
Sbjct: 335 ALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAI 394
Query: 124 ---------------------------------SFLDALCKGHHVDKGIALIKKVIDKGI 150
S + +LC+ + L+ ++ G
Sbjct: 395 GSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGF 454
Query: 151 QPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT--YNTMINGLCKEGLFDEA 208
PD TY+ L+ GLC G A EV + ++ N +N MI GLCK D A
Sbjct: 455 DPDAHTYSALIRGLCLEGMFTGAMEVLS-IMEESENCKPTVDNFNAMILGLCKIRRTDLA 513
Query: 209 LTLMSKMEDNGCIHDPITFETIISALFEKGE 239
+ + M + + + T+ ++ + + E
Sbjct: 514 MEVFEMMVEKKRMPNETTYAILVEGIAHEDE 544
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 74/144 (51%)
Query: 100 VSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNI 159
+S+++ L+ + G ++ L LCK + + K I +I+ ++ GI PD Y
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 160 LLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 219
L++ LCK G + A ++ + + GY N TYN ++ GLC G +++L + ++ G
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 220 CIHDPITFETIISALFEKGENDKA 243
+ T+ ++ A +++ D+A
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEA 230
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 63/114 (55%), Gaps = 1/114 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQM-GVFPDVLSYSIMINGL 59
+L M + G P+ TY++L+ G CL A V + M + P V +++ MI GL
Sbjct: 445 LLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGL 504
Query: 60 CKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVR 113
CK++ + A+ + + M +K +PN TY L++G+ ++ A E+LDE+ +R
Sbjct: 505 CKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLR 558
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 153 bits (387), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 138/243 (56%)
Query: 2 LAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCK 61
L MMK G +P++VT+ SL++G+C VN +A ++ + + +G P+V+ Y+ +I+ LC+
Sbjct: 137 LGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 196
Query: 62 MKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 121
VN AL++LK M I P+ +TYNSLI L +G + +L +M G D+IT
Sbjct: 197 KGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVIT 256
Query: 122 YNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF 181
+++ +D K + + ++I + + P++ TYN L++GLC G + +A++V L
Sbjct: 257 FSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLV 316
Query: 182 KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
KG+ N TYNT+ING CK D+ + ++ M +G D T+ T+ + G+
Sbjct: 317 SKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFS 376
Query: 242 KAE 244
AE
Sbjct: 377 AAE 379
Score = 152 bits (383), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 134/237 (56%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L+ MM+ G+ P+V+T+++L+D Y ++ +A+ +N M Q V P++++Y+ +INGLC
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC 300
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+++EA +L + S+ PN +TYN+LI+G CK +V + ++L M G D
Sbjct: 301 IHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTF 360
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN+ C+ ++ +++ G+ PDM T+NILLDGLC G+I A +DL
Sbjct: 361 TYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDL 420
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK 237
K + TYN +I GLCK ++A L + G D IT+ T++ L K
Sbjct: 421 QKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRK 477
Score = 144 bits (363), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 125/212 (58%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+++ V PN+VTYNSL++G C+ +++A+ V N + G FP+ ++Y+ +ING CK K
Sbjct: 280 MIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKR 339
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V++ + +L M + + +T TYN+L G C+ GK S A ++L M G D+ T+N
Sbjct: 340 VDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNI 399
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
LD LC + K + ++ + + TYNI++ GLCK +++DA +F L KG
Sbjct: 400 LLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKG 459
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKME 216
+ + TY TM+ GL ++ L+ EA L KM+
Sbjct: 460 VSPDVITYITMMIGLRRKRLWREAHELYRKMQ 491
Score = 138 bits (348), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 127/235 (54%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G +PNVV YN+++D C +VN A V M +MG+ PDV++Y+ +I L +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
+L M I P+ IT+++LID K G++ A + +EM R +I+TYNS ++
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
LC +D+ ++ ++ KG P+ TYN L++G CK R+ D ++ + + G + +
Sbjct: 299 LCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGD 358
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+TYNT+ G C+ G F A ++ +M G D TF ++ L + G+ KA
Sbjct: 359 TFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKA 413
Score = 133 bits (335), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 128/225 (56%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G+ ++ ++ +L+D +C ++ A + M ++G P ++++ ++NG C + EA
Sbjct: 109 GISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEA 168
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
++L+ Q+ PN + YN++ID LC+ G+V+ A ++L M G D++TYNS +
Sbjct: 169 MSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITR 228
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
L ++ ++ GI PD+ T++ L+D K G++ +A++ + ++ ++ N N
Sbjct: 229 LFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPN 288
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
TYN++INGLC GL DEA +++ + G + +T+ T+I+
Sbjct: 289 IVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLING 333
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 99/183 (54%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L V++ +G PN VTYN+L++GYC V+ + M++ GV D +Y+ + G C
Sbjct: 311 VLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYC 370
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + A +L +M S + P+ T+N L+DGLC GK+ A L+++ II
Sbjct: 371 QAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGII 430
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN + LCK V+ L + KG+ PD+ TY ++ GL + ++A E+++ +
Sbjct: 431 TYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKM 490
Query: 181 FKK 183
K+
Sbjct: 491 QKE 493
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 106/211 (50%)
Query: 29 EVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYN 88
+ N A +F M + P ++ +S ++ + K+ ++L + + I + ++
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 89 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDK 148
+LID C+ ++S A L +M G I+T+ S ++ C + + ++L+ +++
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 149 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 208
G +P++ YN ++D LC+ G++ A +V + + K G + TYN++I L G + +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 209 LTLMSKMEDNGCIHDPITFETIISALFEKGE 239
++S M G D ITF +I ++G+
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQ 269
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 74/145 (51%)
Query: 99 KVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYN 158
K ++A L +M I+ ++ L A+ K + + I+L + + GI D+ ++
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 159 ILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDN 218
L+D C+C R+ A + K G+ + T+ +++NG C F EA++L+ ++
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 219 GCIHDPITFETIISALFEKGENDKA 243
G + + + TII +L EKG+ + A
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTA 203
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 152 bits (385), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 134/239 (56%), Gaps = 2/239 (0%)
Query: 6 MKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMV 65
++ GV P+V+TYN+L+ GY +++A AV M + G+ PDV +Y+ +I+G K M+
Sbjct: 40 IRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLML 99
Query: 66 NEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDE-MHVRGQPADIITYNS 124
N L L +M + P+ +YN+L+ K G+ A+++L E +H+ G I TYN
Sbjct: 100 NRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNI 159
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
LDALCK H D I L K + + ++P++ TYNIL++GLCK R+ + ++L K G
Sbjct: 160 LLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSG 218
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
Y N TY TM+ K ++ L L KM+ G D ++SAL + G ++A
Sbjct: 219 YTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEA 277
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 129/242 (53%), Gaps = 3/242 (1%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M + G++P+V TYNSL+ G +N+ +F+ M G+ PD+ SY+ +++ K+
Sbjct: 74 MREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGR 133
Query: 65 VNEALNLLKQ-MHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
EA +L + +H ++P TYN L+D LCK+G NA EL + R +P +++TYN
Sbjct: 134 HGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKP-ELMTYN 192
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
++ LCK V +++++ G P+ TY +L K RI+ ++F + K+
Sbjct: 193 ILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKE 252
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGC-IHDPITFETIISALFEKGENDK 242
GY + + +++ L K G +EA M ++ +G D +++ T+++ F+ G D
Sbjct: 253 GYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDA 312
Query: 243 AE 244
+
Sbjct: 313 VD 314
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 121/235 (51%), Gaps = 5/235 (2%)
Query: 6 MKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMV 65
+K VKP ++TYN L++G C V + + + G P+ ++Y+ M+ K K +
Sbjct: 180 LKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRI 239
Query: 66 NEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRG-QPADIITYNS 124
+ L L +M E + +++ L KTG+ A+E + E+ G + DI++YN+
Sbjct: 240 EKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNT 299
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
L+ K ++D L++++ KG++PD T+ I+++GL G A++ + + G
Sbjct: 300 LLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMG 359
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
+ T N +I+GLCK G D A+ L + ME + D T+ +++ L + G
Sbjct: 360 MQPSVVTCNCLIDGLCKAGHVDRAMRLFASME----VRDEFTYTSVVHNLCKDGR 410
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 103/236 (43%), Gaps = 39/236 (16%)
Query: 46 FPDVLS--YSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNA 103
FP + + +I +N LCK + + A LL ++P+ ITYN+LI G + + A
Sbjct: 8 FPGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEA 67
Query: 104 WELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMC-------- 155
+ + M G D+ TYNS + K +++ + L +++ G+ PDM
Sbjct: 68 YAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSC 127
Query: 156 ----------------------------TYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
TYNILLD LCK G +A E+F+ L K
Sbjct: 128 YFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL-KSRVKP 186
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
TYN +INGLCK +M +++ +G + +T+ T++ F+ +K
Sbjct: 187 ELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKG 242
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 99/204 (48%), Gaps = 5/204 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M+ + K G PN VTY +++ Y + K +F M + G D + +++ L
Sbjct: 210 MMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALI 269
Query: 61 KMKMVNEALNLLKQM-HSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADI 119
K EA + ++ S + ++YN+L++ K G + +LL+E+ ++G D
Sbjct: 270 KTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDD 329
Query: 120 ITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
T+ ++ L + + + + G+QP + T N L+DGLCK G + A +F
Sbjct: 330 YTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFAS 389
Query: 180 LFKKGYNLNNWTYNTMINGLCKEG 203
+ + + +TY ++++ LCK+G
Sbjct: 390 MEVR----DEFTYTSVVHNLCKDG 409
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Query: 8 QGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNE 67
+G+KP+ T+ +++G + A+ + +MG+ P V++ + +I+GLCK V+
Sbjct: 323 KGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDR 382
Query: 68 ALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRG 114
A+ L M + + TY S++ LCK G++ A +LL + +G
Sbjct: 383 AMRLFASME----VRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKG 425
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 137/230 (59%), Gaps = 1/230 (0%)
Query: 10 VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEAL 69
+ P+VV++NS+M GYC + V+ A++ F T+ + G+ P V S++I+INGLC + + EAL
Sbjct: 218 IGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEAL 277
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
L M+ + P+++TYN L G G +S AWE++ +M +G D+ITY L
Sbjct: 278 ELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQ 337
Query: 130 CKGHHVDKGIALIKKVIDKGIQPD-MCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
C+ ++D G+ L+K ++ +G + + + +++L GLCK GRI +A +F + G + +
Sbjct: 338 CQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPD 397
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
Y+ +I+GLCK G FD AL L +M D + + T ++ L +KG
Sbjct: 398 LVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKG 447
Score = 130 bits (327), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 129/233 (55%), Gaps = 9/233 (3%)
Query: 16 TYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQM 75
TY++++DG C ++ A T + P V+S++ +++G CK+ V+ A + +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 76 HSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH- 134
++P+ ++N LI+GLC G ++ A EL +M+ G D +TYN L KG H
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYN----ILAKGFHL 304
Query: 135 ---VDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT 191
+ +I+ ++DKG+ PD+ TY ILL G C+ G I + +D+ +G+ LN+
Sbjct: 305 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 364
Query: 192 Y-NTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ M++GLCK G DEAL+L ++M+ +G D + + +I L + G+ D A
Sbjct: 365 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 417
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 137/282 (48%), Gaps = 48/282 (17%)
Query: 1 MLAVMMKQGVKPNVVTYNSLM-DGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGL 59
+L M+ +G + N + S+M G C +++A ++FN M G+ PD+++YSI+I+GL
Sbjct: 349 LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGL 408
Query: 60 CKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADI 119
CK+ + AL L +M ++I+PN+ T+ +L+ GLC+ G + A LLD + G+ DI
Sbjct: 409 CKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDI 468
Query: 120 ITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCK------------- 166
+ YN +D K +++ + L K VI+ GI P + T+N L+ G CK
Sbjct: 469 VLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDV 528
Query: 167 ----------------------CGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLC---- 200
CG K E+ +++ +G N TY+ + GLC
Sbjct: 529 IKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWK 588
Query: 201 --------KEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
+E +F++ + ME G D IT+ TII L
Sbjct: 589 HENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYL 630
Score = 117 bits (293), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 113/231 (48%), Gaps = 12/231 (5%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ V+++ G+ P+V T+NSL+ GYC + +A+ + + + G+ P V+SY+ +++
Sbjct: 490 LFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYA 549
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDE----------- 109
L ++M +E I P +TY+ + GLC+ K N +L E
Sbjct: 550 NCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLR 609
Query: 110 -MHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCG 168
M G P D ITYN+ + LC+ H+ ++ + + + TYNIL+D LC G
Sbjct: 610 DMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYG 669
Query: 169 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 219
I+ A L ++ +L+ + Y T+I C +G + A+ L ++ G
Sbjct: 670 YIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRG 720
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 121/255 (47%), Gaps = 12/255 (4%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L ++ G ++V YN ++DGY + +A +F + + G+ P V +++ +I G C
Sbjct: 455 LLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYC 514
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + + EA +L + + P+ ++Y +L+D G + EL EM G P +
Sbjct: 515 KTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV 574
Query: 121 TYNSFLDALCKG-HHVDKGIALIKKVIDK-----------GIQPDMCTYNILLDGLCKCG 168
TY+ LC+G H + L +++ +K GI PD TYN ++ LC+
Sbjct: 575 TYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVK 634
Query: 169 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFE 228
+ A + + + + ++ TYN +I+ LC G +A + + +++ +
Sbjct: 635 HLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYT 694
Query: 229 TIISALFEKGENDKA 243
T+I A KG+ + A
Sbjct: 695 TLIKAHCVKGDPEMA 709
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 12/218 (5%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L V+ G+ P+VV+Y +LMD Y + M G+ P ++YS++ GLC
Sbjct: 525 ILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLC 584
Query: 61 K------------MKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLD 108
+ ++ + L+ M SE I P+ ITYN++I LC+ +S A+ L+
Sbjct: 585 RGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLE 644
Query: 109 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCG 168
M R A TYN +D+LC ++ K + I + ++ + Y L+ C G
Sbjct: 645 IMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKG 704
Query: 169 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFD 206
+ A ++F L +G+N++ Y+ +IN LC+ L +
Sbjct: 705 DPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLMN 742
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 122/252 (48%), Gaps = 12/252 (4%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M + + PN T+ +L+ G C + +A+++ +++ G D++ Y+I+I+G K
Sbjct: 424 MCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGC 483
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ EAL L K + I P+ T+NSLI G CKT ++ A ++LD + + G +++Y +
Sbjct: 484 IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 543
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ------ 178
+DA + L +++ +GI P TY+++ GLC+ + ++ V +
Sbjct: 544 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK 603
Query: 179 ------DLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIIS 232
D+ +G + TYNT+I LC+ A + M+ T+ +I
Sbjct: 604 CKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILID 663
Query: 233 ALFEKGENDKAE 244
+L G KA+
Sbjct: 664 SLCVYGYIRKAD 675
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 93/167 (55%), Gaps = 7/167 (4%)
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+++MV+++L +LK+M + + +T +YNS++ +T K+ W++ E+ + +
Sbjct: 136 RLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKM---WDVYKEIKDKNEH---- 188
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY++ +D LC+ ++ + ++ K I P + ++N ++ G CK G + A+ F +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITF 227
K G + +++N +INGLC G EAL L S M +G D +T+
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTY 295
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 151 bits (382), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 135/239 (56%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M ++G +P+ TY L+ C ++KA +F+ M G P+V +Y+++I+GLC+
Sbjct: 292 MGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGK 351
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ EA + ++M ++I P+ ITYN+LI+G CK G+V A+ELL M R ++ T+N
Sbjct: 352 IEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNE 411
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++ LC+ K + L+K+++D G+ PD+ +YN+L+DGLC+ G + A ++ +
Sbjct: 412 LMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFD 471
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ T+ +IN CK+G D A + M G D +T T+I + + G+ A
Sbjct: 472 IEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDA 530
Score = 142 bits (357), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 124/240 (51%), Gaps = 1/240 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ +G KPNV TY L+DG C ++ +A V M + +FP V++Y+ +ING CK
Sbjct: 327 MIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGR 386
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V A LL M PN T+N L++GLC+ GK A LL M G DI++YN
Sbjct: 387 VVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNV 446
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D LC+ H++ L+ + I+PD T+ +++ CK G+ A + +KG
Sbjct: 447 LIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKG 506
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+L+ T T+I+G+CK G +AL ++ + + P + I+ L KG K E
Sbjct: 507 ISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDML-SKGCKVKEE 565
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 137/278 (49%), Gaps = 35/278 (12%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L VM K+ KPNV T+N LM+G C V + KA + M G+ PD++SY+++I+GLC
Sbjct: 393 LLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLC 452
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ +N A LL M+ I P+ +T+ ++I+ CK GK A L M +G D +
Sbjct: 453 REGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEV 512
Query: 121 TYNSFLDALC-----------------------------------KGHHVDKGIALIKKV 145
T + +D +C KG V + +A++ K+
Sbjct: 513 TGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKI 572
Query: 146 IDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLF 205
G+ P + TY L+DGL + G I + + + + G N + Y +INGLC+ G
Sbjct: 573 NKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRV 632
Query: 206 DEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+EA L+S M+D+G + +T+ ++ G+ D+A
Sbjct: 633 EEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRA 670
Score = 138 bits (348), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 126/227 (55%), Gaps = 1/227 (0%)
Query: 18 NSLMDGYCLVNEVNKAQAVFNTMT-QMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMH 76
SL+ G+C + A VF+ M+ ++ P+ +SYSI+I+GLC++ + EA L QM
Sbjct: 234 TSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG 293
Query: 77 SEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVD 136
+ P+T TY LI LC G + A+ L DEM RG ++ TY +D LC+ ++
Sbjct: 294 EKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIE 353
Query: 137 KGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMI 196
+ + +K++ I P + TYN L++G CK GR+ A E+ + K+ N T+N ++
Sbjct: 354 EANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELM 413
Query: 197 NGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
GLC+ G +A+ L+ +M DNG D +++ +I L +G + A
Sbjct: 414 EGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTA 460
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 125/232 (53%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNL 71
PN V+Y+ L+ G C V + +A + + M + G P +Y+++I LC ++++A NL
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323
Query: 72 LKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 131
+M PN TY LIDGLC+ GK+ A + +M +ITYN+ ++ CK
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCK 383
Query: 132 GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT 191
V L+ + + +P++ T+N L++GLC+ G+ A + + + G + + +
Sbjct: 384 DGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVS 443
Query: 192 YNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
YN +I+GLC+EG + A L+S M D +TF II+A ++G+ D A
Sbjct: 444 YNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVA 495
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 129/235 (54%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+K + P+V+TYN+L++GYC V A + M + P+V +++ ++ GLC++
Sbjct: 362 MVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGK 421
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+A++LLK+M + P+ ++YN LIDGLC+ G ++ A++LL M+ D +T+ +
Sbjct: 422 PYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTA 481
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++A CK D A + ++ KGI D T L+DG+CK G+ +DA + + L K
Sbjct: 482 IINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMR 541
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
+ N +++ L K E L ++ K+ G + +T+ T++ L G+
Sbjct: 542 ILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGD 596
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 130/232 (56%), Gaps = 6/232 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
L +M+++G+ + VT +L+DG C V + A + T+ +M + S +++++ L
Sbjct: 498 FLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLS 557
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K V E L +L +++ ++P+ +TY +L+DGL ++G ++ ++ +L+ M + G ++
Sbjct: 558 KGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVY 617
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
Y ++ LC+ V++ L+ + D G+ P+ TY +++ G G++ A E + +
Sbjct: 618 PYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAM 677
Query: 181 FKKGYNLNNWTYNTMING--LCKEGLFDEALTLMS----KMEDNGCIHDPIT 226
++GY LN+ Y++++ G L ++G+ + + +S + D CI++ I+
Sbjct: 678 VERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELIS 729
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 95/194 (48%), Gaps = 3/194 (1%)
Query: 52 YSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMH 111
YS ++ L K+ + A ++M ++ + I Y ++++ LCK G A + ++
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222
Query: 112 VRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGI--QPDMCTYNILLDGLCKCGR 169
G D S L C+G ++ + + V+ K + P+ +Y+IL+ GLC+ GR
Sbjct: 223 KIGFVLDSHIGTSLLLGFCRGLNLRDALKVF-DVMSKEVTCAPNSVSYSILIHGLCEVGR 281
Query: 170 IKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFET 229
+++A + + +KG + TY +I LC GL D+A L +M GC + T+
Sbjct: 282 LEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTV 341
Query: 230 IISALFEKGENDKA 243
+I L G+ ++A
Sbjct: 342 LIDGLCRDGKIEEA 355
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 151 bits (382), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 137/230 (59%), Gaps = 1/230 (0%)
Query: 10 VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEAL 69
+ P+VV++NS+M GYC + V+ A++ F T+ + G+ P V S++I+INGLC + + EAL
Sbjct: 218 IGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEAL 277
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
L M+ + P+++TYN L G G +S AWE++ +M +G D+ITY L
Sbjct: 278 ELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQ 337
Query: 130 CKGHHVDKGIALIKKVIDKGIQPD-MCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
C+ ++D G+ L+K ++ +G + + + +++L GLCK GRI +A +F + G + +
Sbjct: 338 CQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPD 397
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
Y+ +I+GLCK G FD AL L +M D + + T ++ L +KG
Sbjct: 398 LVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKG 447
Score = 130 bits (327), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 129/233 (55%), Gaps = 9/233 (3%)
Query: 16 TYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQM 75
TY++++DG C ++ A T + P V+S++ +++G CK+ V+ A + +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 76 HSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH- 134
++P+ ++N LI+GLC G ++ A EL +M+ G D +TYN L KG H
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYN----ILAKGFHL 304
Query: 135 ---VDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT 191
+ +I+ ++DKG+ PD+ TY ILL G C+ G I + +D+ +G+ LN+
Sbjct: 305 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 364
Query: 192 Y-NTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ M++GLCK G DEAL+L ++M+ +G D + + +I L + G+ D A
Sbjct: 365 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 417
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 137/282 (48%), Gaps = 48/282 (17%)
Query: 1 MLAVMMKQGVKPNVVTYNSLM-DGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGL 59
+L M+ +G + N + S+M G C +++A ++FN M G+ PD+++YSI+I+GL
Sbjct: 349 LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGL 408
Query: 60 CKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADI 119
CK+ + AL L +M ++I+PN+ T+ +L+ GLC+ G + A LLD + G+ DI
Sbjct: 409 CKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDI 468
Query: 120 ITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCK------------- 166
+ YN +D K +++ + L K VI+ GI P + T+N L+ G CK
Sbjct: 469 VLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDV 528
Query: 167 ----------------------CGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLC---- 200
CG K E+ +++ +G N TY+ + GLC
Sbjct: 529 IKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWK 588
Query: 201 --------KEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
+E +F++ + ME G D IT+ TII L
Sbjct: 589 HENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYL 630
Score = 117 bits (293), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 113/231 (48%), Gaps = 12/231 (5%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ V+++ G+ P+V T+NSL+ GYC + +A+ + + + G+ P V+SY+ +++
Sbjct: 490 LFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYA 549
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDE----------- 109
L ++M +E I P +TY+ + GLC+ K N +L E
Sbjct: 550 NCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLR 609
Query: 110 -MHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCG 168
M G P D ITYN+ + LC+ H+ ++ + + + TYNIL+D LC G
Sbjct: 610 DMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYG 669
Query: 169 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 219
I+ A L ++ +L+ + Y T+I C +G + A+ L ++ G
Sbjct: 670 YIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRG 720
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 121/255 (47%), Gaps = 12/255 (4%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L ++ G ++V YN ++DGY + +A +F + + G+ P V +++ +I G C
Sbjct: 455 LLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYC 514
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + + EA +L + + P+ ++Y +L+D G + EL EM G P +
Sbjct: 515 KTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV 574
Query: 121 TYNSFLDALCKG-HHVDKGIALIKKVIDK-----------GIQPDMCTYNILLDGLCKCG 168
TY+ LC+G H + L +++ +K GI PD TYN ++ LC+
Sbjct: 575 TYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVK 634
Query: 169 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFE 228
+ A + + + + ++ TYN +I+ LC G +A + + +++ +
Sbjct: 635 HLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYT 694
Query: 229 TIISALFEKGENDKA 243
T+I A KG+ + A
Sbjct: 695 TLIKAHCVKGDPEMA 709
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 12/218 (5%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L V+ G+ P+VV+Y +LMD Y + M G+ P ++YS++ GLC
Sbjct: 525 ILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLC 584
Query: 61 K------------MKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLD 108
+ ++ + L+ M SE I P+ ITYN++I LC+ +S A+ L+
Sbjct: 585 RGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLE 644
Query: 109 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCG 168
M R A TYN +D+LC ++ K + I + ++ + Y L+ C G
Sbjct: 645 IMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKG 704
Query: 169 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFD 206
+ A ++F L +G+N++ Y+ +IN LC+ L +
Sbjct: 705 DPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLMN 742
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 122/252 (48%), Gaps = 12/252 (4%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M + + PN T+ +L+ G C + +A+++ +++ G D++ Y+I+I+G K
Sbjct: 424 MCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGC 483
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ EAL L K + I P+ T+NSLI G CKT ++ A ++LD + + G +++Y +
Sbjct: 484 IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 543
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ------ 178
+DA + L +++ +GI P TY+++ GLC+ + ++ V +
Sbjct: 544 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK 603
Query: 179 ------DLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIIS 232
D+ +G + TYNT+I LC+ A + M+ T+ +I
Sbjct: 604 CKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILID 663
Query: 233 ALFEKGENDKAE 244
+L G KA+
Sbjct: 664 SLCVYGYIRKAD 675
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 93/167 (55%), Gaps = 7/167 (4%)
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+++MV+++L +LK+M + + +T +YNS++ +T K+ W++ E+ + +
Sbjct: 136 RLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKM---WDVYKEIKDKNEH---- 188
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY++ +D LC+ ++ + ++ K I P + ++N ++ G CK G + A+ F +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITF 227
K G + +++N +INGLC G EAL L S M +G D +T+
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTY 295
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 151 bits (381), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 131/246 (53%), Gaps = 8/246 (3%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M K+G P+ TY +L+ G C +++A+ +F M + P V++Y+ +INGLC K
Sbjct: 183 MPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKN 242
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V+EA+ L++M S+ I PN TY+SL+DGLCK G+ A EL + M RG +++TY +
Sbjct: 243 VDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTT 302
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ LCK + + + L+ ++ +G++PD Y ++ G C + ++A ++ G
Sbjct: 303 LITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGG 362
Query: 185 YNLNNWTYNT-------MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK 237
N T+N ++ GLC A TL M G + T E+++ L +K
Sbjct: 363 ITPNRLTWNIHVKTSNEVVRGLCA-NYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKK 421
Query: 238 GENDKA 243
GE KA
Sbjct: 422 GEFQKA 427
Score = 134 bits (337), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 123/224 (54%), Gaps = 1/224 (0%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK-MVNEALN 70
P+ Y +++ N++N A + M ++G+ P V S +++I LC+ V+ L
Sbjct: 119 PSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLK 178
Query: 71 LLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 130
+ +M P++ TY +LI GLC+ G++ A +L EM + ++TY S ++ LC
Sbjct: 179 IFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLC 238
Query: 131 KGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 190
+VD+ + ++++ KGI+P++ TY+ L+DGLCK GR A E+F+ + +G N
Sbjct: 239 GSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMV 298
Query: 191 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
TY T+I GLCKE EA+ L+ +M G D + +IS
Sbjct: 299 TYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGF 342
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 117/224 (52%), Gaps = 1/224 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVN-EVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
M + G+ P V + N L+ C + V+ +F M + G PD +Y +I+GLC+
Sbjct: 147 MREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFG 206
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
++EA L +M + P +TY SLI+GLC + V A L+EM +G ++ TY+
Sbjct: 207 RIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYS 266
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
S +D LCK + + L + ++ +G +P+M TY L+ GLCK +I++A E+ + +
Sbjct: 267 SLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQ 326
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITF 227
G + Y +I+G C F EA + +M G + +T+
Sbjct: 327 GLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTW 370
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 1/217 (0%)
Query: 19 SLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSE 78
S+ GY V+ + VF+ M P +Y ++ L + +N A K M
Sbjct: 91 SICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREI 150
Query: 79 KIIPNTITYNSLIDGLCKT-GKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDK 137
+ P + N LI LC+ G V ++ EM RG D TY + + LC+ +D+
Sbjct: 151 GLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDE 210
Query: 138 GIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMIN 197
L ++++K P + TY L++GLC + +A +++ KG N +TY+++++
Sbjct: 211 AKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMD 270
Query: 198 GLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
GLCK+G +A+ L M GC + +T+ T+I+ L
Sbjct: 271 GLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGL 307
Score = 103 bits (258), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 114/236 (48%), Gaps = 29/236 (12%)
Query: 2 LAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCK 61
L M +G++PNV TY+SLMDG C +A +F M G P++++Y+ +I GLCK
Sbjct: 250 LEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCK 309
Query: 62 MKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 121
+ + EA+ LL +M+ + + P+ Y +I G C K A LDEM + G + +T
Sbjct: 310 EQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLT 369
Query: 122 YNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF 181
+N HV T N ++ GLC A ++ +
Sbjct: 370 WNI---------HVK-------------------TSNEVVRGLC-ANYPSRAFTLYLSMR 400
Query: 182 KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK 237
+G ++ T +++ LCK+G F +A+ L+ ++ +GCI T++ +I +K
Sbjct: 401 SRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDK 456
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 8/168 (4%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ +MM +G +PN+VTY +L+ G C ++ +A + + M G+ PD Y +I+G C
Sbjct: 284 LFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFC 343
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITY-------NSLIDGLCKTGKVSNAWELLDEMHVR 113
+ EA N L +M I PN +T+ N ++ GLC S A+ L M R
Sbjct: 344 AISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSMRSR 402
Query: 114 GQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILL 161
G ++ T S + LCK K + L+ +++ G P T+ +L+
Sbjct: 403 GISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 150 bits (378), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 131/239 (54%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M + +K +VV +++D C AQ +F M + G+FP+VL+Y+ MI+ C
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++A LL+ M ++I P+ +T+++LI+ K KVS A E+ EM ITYNS
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D CK VD ++ + KG PD+ T++ L++G CK R+ + E+F ++ ++G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
N TY T+I+G C+ G D A L+++M G D ITF +++ L K E KA
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKA 239
Score = 145 bits (366), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 122/216 (56%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ M ++G+ PNV+TYN ++D +C + A + M + + PD++++S +IN
Sbjct: 32 LFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFV 91
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + V+EA + K+M I P TITYNS+IDG CK +V +A +LD M +G D++
Sbjct: 92 KERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVV 151
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
T+++ ++ CK VD G+ + ++ +GI + TY L+ G C+ G + AQ++ ++
Sbjct: 152 TFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEM 211
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKME 216
G + T++ M+ GLC + +A ++ ++
Sbjct: 212 ISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQ 247
Score = 127 bits (318), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 110/182 (60%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M+++ + P++VT+++L++ + +V++A+ ++ M + +FP ++Y+ MI+G C
Sbjct: 67 LLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFC 126
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K V++A +L M S+ P+ +T+++LI+G CK +V N E+ EMH RG A+ +
Sbjct: 127 KQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTV 186
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY + + C+ +D L+ ++I G+ PD T++ +L GLC ++ A + +DL
Sbjct: 187 TYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Query: 181 FK 182
K
Sbjct: 247 QK 248
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 112/205 (54%)
Query: 40 MTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGK 99
M Q + DV+ + +++ LCK A NL +MH + I PN +TYN +ID C +G+
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 100 VSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNI 159
S+A +LL M + DI+T+++ ++A K V + + K+++ I P TYN
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 160 LLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 219
++DG CK R+ DA+ + + KG + + T++T+ING CK D + + +M G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 220 CIHDPITFETIISALFEKGENDKAE 244
+ + +T+ T+I + G+ D A+
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQ 205
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M ++G+ N VTY +L+ G+C V +++ AQ + N M GV PD +++ M+ GLC K
Sbjct: 176 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKE 235
Query: 65 VNEALNLLKQMHSEK 79
+ +A +L+ + +
Sbjct: 236 LRKAFAILEDLQKSE 250
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 131/259 (50%), Gaps = 16/259 (6%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDV----------- 49
+ M+ +G PN+VTY++L+DG+C +V KA +F M PDV
Sbjct: 575 LFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNS 634
Query: 50 -----LSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAW 104
++Y +++G CK V EA LL M E PN I Y++LIDGLCK GK+ A
Sbjct: 635 ERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQ 694
Query: 105 ELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGL 164
E+ EM G PA + TY+S +D K D ++ K+++ P++ Y ++DGL
Sbjct: 695 EVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGL 754
Query: 165 CKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDP 224
CK G+ +A ++ Q + +KG N TY MI+G G + L L+ +M G +
Sbjct: 755 CKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNY 814
Query: 225 ITFETIISALFEKGENDKA 243
+T+ +I + G D A
Sbjct: 815 VTYRVLIDHCCKNGALDVA 833
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 117/207 (56%), Gaps = 2/207 (0%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALN 70
+PNVVTY +L+DG+C + V +A+ + + M+ G P+ + Y +I+GLCK+ ++EA
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 695
Query: 71 LLKQMHSEKIIPNTI-TYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
+ +M SE P T+ TY+SLID K + A ++L +M +++ Y +D L
Sbjct: 696 VKTEM-SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGL 754
Query: 130 CKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 189
CK D+ L++ + +KG QP++ TY ++DG G+I+ E+ + + KG N
Sbjct: 755 CKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNY 814
Query: 190 WTYNTMINGLCKEGLFDEALTLMSKME 216
TY +I+ CK G D A L+ +M+
Sbjct: 815 VTYRVLIDHCCKNGALDVAHNLLEEMK 841
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 125/256 (48%), Gaps = 16/256 (6%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ GV N + +S C + KA +V M G PD +YS ++N LC
Sbjct: 439 MLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASK 498
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ A L ++M ++ + TY ++D CK G + A + +EM G +++TY +
Sbjct: 499 MELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTA 558
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ------ 178
+ A K V L + ++ +G P++ TY+ L+DG CK G+++ A ++F+
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 618
Query: 179 -----DLFKKGYNLNNW-----TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFE 228
D++ K Y+ N+ TY +++G CK +EA L+ M GC + I ++
Sbjct: 619 DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 678
Query: 229 TIISALFEKGENDKAE 244
+I L + G+ D+A+
Sbjct: 679 ALIDGLCKVGKLDEAQ 694
Score = 120 bits (302), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 119/215 (55%), Gaps = 2/215 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M +G +PN + Y++L+DG C V ++++AQ V M++ G + +YS +I+
Sbjct: 661 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYF 720
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K+K + A +L +M PN + Y +IDGLCK GK A++L+ M +G +++
Sbjct: 721 KVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVV 780
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY + +D ++ + L++++ KG+ P+ TY +L+D CK G + A + +++
Sbjct: 781 TYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM 215
+ + + Y +I G KE F E+L L+ ++
Sbjct: 841 KQTHWPTHTAGYRKVIEGFNKE--FIESLGLLDEI 873
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 123/245 (50%), Gaps = 4/245 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L+ M++ PNVV Y ++DG C V + ++A + M + G P+V++Y+ MI+G
Sbjct: 731 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 790
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + L LL++M S+ + PN +TY LID CK G + A LL+EM P
Sbjct: 791 MIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 850
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
Y ++ K + + L+ ++ P + Y +L+D L K R++ A + +++
Sbjct: 851 GYRKVIEGFNK--EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV 908
Query: 181 FKKGYNLNNW--TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
L ++ TYN++I LC + A L S+M G I + +F ++I LF
Sbjct: 909 ATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNS 968
Query: 239 ENDKA 243
+ +A
Sbjct: 969 KISEA 973
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 123/249 (49%), Gaps = 6/249 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L +MM +G P+ +NSL+ YC + + A + M + G P + Y+I+I +C
Sbjct: 359 VLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC 418
Query: 61 --KMKMVNEALNLLKQMHSE----KIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRG 114
K + + L+L ++ +SE ++ N I +S LC GK A+ ++ EM +G
Sbjct: 419 GDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQG 478
Query: 115 QPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQ 174
D TY+ L+ LC ++ L +++ G+ D+ TY I++D CK G I+ A+
Sbjct: 479 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 538
Query: 175 EVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
+ F ++ + G N TY +I+ K A L M GC+ + +T+ +I
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598
Query: 235 FEKGENDKA 243
+ G+ +KA
Sbjct: 599 CKAGQVEKA 607
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 118/273 (43%), Gaps = 41/273 (15%)
Query: 2 LAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCK 61
L ++ + P+ V Y L+ G C + +A N M P+V++YS ++ G
Sbjct: 290 LTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349
Query: 62 MKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 121
K + +L M E P+ +NSL+ C +G S A++LL +M G +
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVV 409
Query: 122 YN-----------------------------------------SFLDALCKGHHVDKGIA 140
YN SF LC +K +
Sbjct: 410 YNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFS 469
Query: 141 LIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLC 200
+I+++I +G PD TY+ +L+ LC +++ A +F+++ + G + +TY M++ C
Sbjct: 470 VIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFC 529
Query: 201 KEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
K GL ++A ++M + GC + +T+ +I A
Sbjct: 530 KAGLIEQARKWFNEMREVGCTPNVVTYTALIHA 562
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 111/221 (50%), Gaps = 6/221 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNE------VNKAQAVFNTMTQMGVFPDVLSYSI 54
+L M+K G P V YN L+ C + ++ A+ ++ M GV + ++ S
Sbjct: 394 LLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSS 453
Query: 55 MINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRG 114
LC +A +++++M + IP+T TY+ +++ LC K+ A+ L +EM G
Sbjct: 454 FTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGG 513
Query: 115 QPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQ 174
AD+ TY +D+ CK +++ ++ + G P++ TY L+ K ++ A
Sbjct: 514 LVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYAN 573
Query: 175 EVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM 215
E+F+ + +G N TY+ +I+G CK G ++A + +M
Sbjct: 574 ELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 114/262 (43%), Gaps = 38/262 (14%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMT----QMGVF-------------------- 46
+P+ TYN L+ + + ++ A + M+ +M F
Sbjct: 232 RPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALT 291
Query: 47 --------PDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTG 98
PD + Y+ +I+GLC+ + EA++ L +M + +PN +TY++L+ G
Sbjct: 292 LVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKK 351
Query: 99 KVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYN 158
++ +L+ M + G +NS + A C L+KK++ G P YN
Sbjct: 352 QLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYN 411
Query: 159 ILLDGLC------KCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLM 212
IL+ +C C + A++ + ++ G LN ++ LC G +++A +++
Sbjct: 412 ILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVI 471
Query: 213 SKMEDNGCIHDPITFETIISAL 234
+M G I D T+ +++ L
Sbjct: 472 REMIGQGFIPDTSTYSKVLNYL 493
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 81/186 (43%), Gaps = 35/186 (18%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQ------------------ 42
+L M +GV PN VTY L+D C ++ A + M Q
Sbjct: 801 LLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFN 860
Query: 43 ------MGVF---------PDVLSYSIMINGLCKMKMVNEALNLLKQM--HSEKIIPNTI 85
+G+ P + Y ++I+ L K + + AL LL+++ S ++ +
Sbjct: 861 KEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSS 920
Query: 86 TYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKV 145
TYNSLI+ LC KV A++L EM +G ++ ++ S + L + + + + L+ +
Sbjct: 921 TYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFI 980
Query: 146 IDKGIQ 151
IQ
Sbjct: 981 SHMEIQ 986
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 105/240 (43%), Gaps = 21/240 (8%)
Query: 14 VVTYNSLMDGYCLVNEVNKAQAVFNTMTQ--MGVFPDVLSYSIMINGLCKMKMVNEALNL 71
++T +S+ D + + V+ VF +Q + F + LS S++I L + + ++
Sbjct: 93 IITQSSI-DARAIADAVSGVDDVFGRKSQKFLRQFREKLSESLVIEVLRLIARPSAVISF 151
Query: 72 L----KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 127
+Q+ + P YN+L+D + + E L ++ + D + FL+
Sbjct: 152 FVWAGRQIGYKHTAP---VYNALVDLIVRDDDEKVPEEFLQQI----RDDDKEVFGEFLN 204
Query: 128 ALCKGHHVDKGIAL----IKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
L + H + ++ + ++ D +P TYN L+ K R+ A + +++
Sbjct: 205 VLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLA 264
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
++ +T LCK G + EALTL +E + D + + +IS L E ++A
Sbjct: 265 NLRMDGFTLRCFAYSLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEEA 321
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 128/227 (56%), Gaps = 4/227 (1%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ G+ P V+T+N+L++G CL V +A A+ N M G+ DV++Y ++NG+CKM
Sbjct: 217 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 276
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
ALNLL +M I P+ + Y+++ID LCK G S+A L EM +G ++ TYN
Sbjct: 277 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 336
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D C L++ +I++ I PD+ T+N L+ K G++ +A+++ ++ +
Sbjct: 337 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 396
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 231
+ TYN+MI G CK FD+A + M D +TF TII
Sbjct: 397 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTII 439
Score = 148 bits (374), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 143/256 (55%), Gaps = 17/256 (6%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKA---------------QAVFNTMTQMGVFPDV 49
+ K G +P+VVT+N+L+ G CL + +++A A+F+ M ++G+ P V
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVV 226
Query: 50 LSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDE 109
++++ +INGLC V EA L+ +M + + + +TY ++++G+CK G +A LL +
Sbjct: 227 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK 286
Query: 110 MHVRGQPADIITYNSFLDALCK-GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCG 168
M D++ Y++ +D LCK GHH D L ++++KGI P++ TYN ++DG C G
Sbjct: 287 MEETHIKPDVVIYSAIIDRLCKDGHHSDAQY-LFSEMLEKGIAPNVFTYNCMIDGFCSFG 345
Query: 169 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFE 228
R DAQ + +D+ ++ N + T+N +I+ KEG EA L +M D +T+
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405
Query: 229 TIISALFEKGENDKAE 244
++I + D A+
Sbjct: 406 SMIYGFCKHNRFDDAK 421
Score = 147 bits (372), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 131/234 (55%), Gaps = 1/234 (0%)
Query: 10 VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEAL 69
P+VVT+N+++D YC V++ + +++ G+ + +Y+ +I+G C++ +N A
Sbjct: 428 ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ 487
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
+L ++M S + P+TIT N L+ G C+ K+ A EL + + + D + YN + +
Sbjct: 488 DLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGM 547
Query: 130 CKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 189
CKG VD+ L + G++PD+ TYN+++ G C I DA +F + G+ +N
Sbjct: 548 CKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDN 607
Query: 190 WTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
TYNT+I G K G D+++ L+S+M NG D T + +++ L G DK+
Sbjct: 608 STYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLDKS 660
Score = 140 bits (354), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 140/247 (56%), Gaps = 15/247 (6%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEAL--- 69
N+ ++N L+ +C ++++ + + F +T++G PDV++++ +++GLC ++EAL
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 70 ------------NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPA 117
L QM + P IT+N+LI+GLC G+V A L+++M +G
Sbjct: 200 GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI 259
Query: 118 DIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVF 177
D++TY + ++ +CK + L+ K+ + I+PD+ Y+ ++D LCK G DAQ +F
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 178 QDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK 237
++ +KG N +TYN MI+G C G + +A L+ M + D +TF +ISA ++
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 379
Query: 238 GENDKAE 244
G+ +AE
Sbjct: 380 GKLFEAE 386
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 133/244 (54%), Gaps = 7/244 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L+ M + +KP+VV Y++++D C + AQ +F+ M + G+ P+V +Y+ MI+G C
Sbjct: 283 LLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFC 342
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++A LL+ M +I P+ +T+N+LI K GK+ A +L DEM R D +
Sbjct: 343 SFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV 402
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYNS + CK + D K + D PD+ T+N ++D C+ R+ + ++ +++
Sbjct: 403 TYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREI 458
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
++G N TYNT+I+G C+ + A L +M +G D IT + L+ EN
Sbjct: 459 SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL---LYGFCEN 515
Query: 241 DKAE 244
+K E
Sbjct: 516 EKLE 519
Score = 138 bits (348), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 132/269 (49%), Gaps = 39/269 (14%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ + M+++G+ PNV TYN ++DG+C + AQ + M + + PDVL+++ +I+
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASV 377
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + EA L +M I P+T+TYNS+I G CK + +A + D M D++
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVV 433
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
T+N+ +D C+ VD+G+ L++++ +G+ + TYN L+ G C+ + AQ++FQ++
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493
Query: 181 FKKGY-----------------------------------NLNNWTYNTMINGLCKEGLF 205
G +L+ YN +I+G+CK
Sbjct: 494 ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV 553
Query: 206 DEALTLMSKMEDNGCIHDPITFETIISAL 234
DEA L + +G D T+ +IS
Sbjct: 554 DEAWDLFCSLPIHGVEPDVQTYNVMISGF 582
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 115/212 (54%), Gaps = 1/212 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L + ++G+ N TYN+L+ G+C V+ +N AQ +F M GV PD ++ +I++ G C
Sbjct: 454 LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 513
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + + EAL L + + KI +T+ YN +I G+CK KV AW+L + + G D+
Sbjct: 514 ENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQ 573
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN + C + L K+ D G +PD TYN L+ G K G I + E+ ++
Sbjct: 574 TYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLM 212
G++ + +T M+ L +G D++ + M
Sbjct: 634 RSNGFSGDAFTIK-MVADLITDGRLDKSFSDM 664
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 118/240 (49%), Gaps = 15/240 (6%)
Query: 20 LMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEK 79
L G ++ A F+ M + F + + +I +M + A++L ++M +
Sbjct: 77 LKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRR 136
Query: 80 IIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK-------- 131
I N ++N LI C K+S + ++ G D++T+N+ L LC
Sbjct: 137 IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEAL 196
Query: 132 ---GHHVDKG----IALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
G+ V+ G +AL ++++ G+ P + T+N L++GLC GR+ +A + + KG
Sbjct: 197 ALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+++ TY T++NG+CK G AL L+SKME+ D + + II L + G + A+
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 128/227 (56%), Gaps = 4/227 (1%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ G+ P V+T+N+L++G CL V +A A+ N M G+ DV++Y ++NG+CKM
Sbjct: 217 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 276
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
ALNLL +M I P+ + Y+++ID LCK G S+A L EM +G ++ TYN
Sbjct: 277 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 336
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D C L++ +I++ I PD+ T+N L+ K G++ +A+++ ++ +
Sbjct: 337 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 396
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 231
+ TYN+MI G CK FD+A + M D +TF TII
Sbjct: 397 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTII 439
Score = 148 bits (373), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 143/256 (55%), Gaps = 17/256 (6%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKA---------------QAVFNTMTQMGVFPDV 49
+ K G +P+VVT+N+L+ G CL + +++A A+F+ M ++G+ P V
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVV 226
Query: 50 LSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDE 109
++++ +INGLC V EA L+ +M + + + +TY ++++G+CK G +A LL +
Sbjct: 227 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK 286
Query: 110 MHVRGQPADIITYNSFLDALCK-GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCG 168
M D++ Y++ +D LCK GHH D L ++++KGI P++ TYN ++DG C G
Sbjct: 287 MEETHIKPDVVIYSAIIDRLCKDGHHSDAQY-LFSEMLEKGIAPNVFTYNCMIDGFCSFG 345
Query: 169 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFE 228
R DAQ + +D+ ++ N + T+N +I+ KEG EA L +M D +T+
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405
Query: 229 TIISALFEKGENDKAE 244
++I + D A+
Sbjct: 406 SMIYGFCKHNRFDDAK 421
Score = 147 bits (370), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 132/239 (55%), Gaps = 4/239 (1%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ + + P+ VTYNS++ G+C N + A+ +F+ M PDV++++ +I+ C+ K
Sbjct: 392 MLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKR 447
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V+E + LL+++ ++ NT TYN+LI G C+ ++ A +L EM G D IT N
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
L C+ +++ + L + + I D YNI++ G+CK ++ +A ++F L G
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ TYN MI+G C + +A L KM+DNG D T+ T+I + GE DK+
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKS 626
Score = 144 bits (364), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 122/217 (56%)
Query: 10 VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEAL 69
P+VVT+N+++D YC V++ + +++ G+ + +Y+ +I+G C++ +N A
Sbjct: 428 ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ 487
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
+L ++M S + P+TIT N L+ G C+ K+ A EL + + + D + YN + +
Sbjct: 488 DLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGM 547
Query: 130 CKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 189
CKG VD+ L + G++PD+ TYN+++ G C I DA +F + G+ +N
Sbjct: 548 CKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDN 607
Query: 190 WTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPIT 226
TYNT+I G K G D+++ L+S+M NG D T
Sbjct: 608 STYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 140 bits (353), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 140/247 (56%), Gaps = 15/247 (6%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEAL--- 69
N+ ++N L+ +C ++++ + + F +T++G PDV++++ +++GLC ++EAL
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 70 ------------NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPA 117
L QM + P IT+N+LI+GLC G+V A L+++M +G
Sbjct: 200 GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI 259
Query: 118 DIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVF 177
D++TY + ++ +CK + L+ K+ + I+PD+ Y+ ++D LCK G DAQ +F
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 178 QDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK 237
++ +KG N +TYN MI+G C G + +A L+ M + D +TF +ISA ++
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 379
Query: 238 GENDKAE 244
G+ +AE
Sbjct: 380 GKLFEAE 386
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 133/244 (54%), Gaps = 7/244 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L+ M + +KP+VV Y++++D C + AQ +F+ M + G+ P+V +Y+ MI+G C
Sbjct: 283 LLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFC 342
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++A LL+ M +I P+ +T+N+LI K GK+ A +L DEM R D +
Sbjct: 343 SFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV 402
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYNS + CK + D K + D PD+ T+N ++D C+ R+ + ++ +++
Sbjct: 403 TYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREI 458
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
++G N TYNT+I+G C+ + A L +M +G D IT + L+ EN
Sbjct: 459 SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL---LYGFCEN 515
Query: 241 DKAE 244
+K E
Sbjct: 516 EKLE 519
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 108/201 (53%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L + ++G+ N TYN+L+ G+C V+ +N AQ +F M GV PD ++ +I++ G C
Sbjct: 454 LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 513
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + + EAL L + + KI +T+ YN +I G+CK KV AW+L + + G D+
Sbjct: 514 ENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQ 573
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN + C + L K+ D G +PD TYN L+ G K G I + E+ ++
Sbjct: 574 TYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Query: 181 FKKGYNLNNWTYNTMINGLCK 201
G++ + +T +C+
Sbjct: 634 RSNGFSGDAFTIKMAEEIICR 654
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 118/240 (49%), Gaps = 15/240 (6%)
Query: 20 LMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEK 79
L G ++ A F+ M + F + + +I +M + A++L ++M +
Sbjct: 77 LKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRR 136
Query: 80 IIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK-------- 131
I N ++N LI C K+S + ++ G D++T+N+ L LC
Sbjct: 137 IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEAL 196
Query: 132 ---GHHVDKG----IALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
G+ V+ G +AL ++++ G+ P + T+N L++GLC GR+ +A + + KG
Sbjct: 197 ALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+++ TY T++NG+CK G AL L+SKME+ D + + II L + G + A+
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 148 bits (374), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 137/243 (56%), Gaps = 4/243 (1%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ GV P ++T+N L++G C + KA + M +MG P+ +SY+ +I GLC +
Sbjct: 147 MIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNN 206
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKV-SNAWELLDEMHVRGQ---PADII 120
V++AL L M+ I PN +T N ++ LC+ G + +N +LL+E+ Q P DI+
Sbjct: 207 VDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIV 266
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
+D+ K +V + + + K++ K + D YN+++ GLC G + A D+
Sbjct: 267 ICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDM 326
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
K+G N + +TYNT+I+ LCKEG FDEA L M++ G D I+++ II L G+
Sbjct: 327 VKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDV 386
Query: 241 DKA 243
++A
Sbjct: 387 NRA 389
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 118/223 (52%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+K+GV P+V TYN+L+ C + ++A + TM GV PD +SY ++I GLC
Sbjct: 326 MVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGD 385
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
VN A L M ++P + +N +IDG + G S+A +L+ M G ++ T N+
Sbjct: 386 VNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNA 445
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ KG + + ++ I PD TYN+LL C G ++ A +++ ++ ++G
Sbjct: 446 LIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRG 505
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITF 227
+ TY ++ GLC +G +A +L+S+++ G D + F
Sbjct: 506 CQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPF 548
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 131/284 (46%), Gaps = 49/284 (17%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M + G PN V+YN+L+ G C VN V+KA +FNTM + G+ P+ ++ +I+++ LC+ +
Sbjct: 182 MREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGV 241
Query: 65 VN---------------------------------------EALNLLKQMHSEKIIPNTI 85
+ +AL + K+M + + +++
Sbjct: 242 IGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSV 301
Query: 86 TYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKV 145
YN +I GLC +G + A+ + +M RG D+ TYN+ + ALCK D+ L +
Sbjct: 302 VYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTM 361
Query: 146 IDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLF 205
+ G+ PD +Y +++ GLC G + A E + K +N +I+G + G
Sbjct: 362 QNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDT 421
Query: 206 DEALTLMSKM----------EDNGCIHDPITFETIISALFEKGE 239
AL++++ M +N IH + +I A + K E
Sbjct: 422 SSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNE 465
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 116/240 (48%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M ++ V + V YN ++ G C + A M + GV PDV +Y+ +I+ LCK
Sbjct: 291 MSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGK 350
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+EA +L M + + P+ I+Y +I GLC G V+ A E L M +++ +N
Sbjct: 351 FDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNV 410
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D + ++++ ++ G++P++ T N L+ G K GR+ DA V ++
Sbjct: 411 VIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTK 470
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ + TYN ++ C G A L +M GC D IT+ ++ L KG KAE
Sbjct: 471 IHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAE 530
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 122/262 (46%), Gaps = 42/262 (16%)
Query: 24 YCLVNEVNKAQAVFNTMTQMGVFP--DVLS-YSIMINGLCKMKMVNEALNLLKQMHSEKI 80
Y L + +++ ++ ++ Q F D LS +S ++ LC ++ AL L K+M +
Sbjct: 93 YILKSSLDRLASLRESVCQTKSFDYDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGV 152
Query: 81 IPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIA 140
IP IT+N L++GLCK G + A L+ EM G + ++YN+ + LC ++VDK +
Sbjct: 153 IPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALY 212
Query: 141 LIKKVIDKGIQPDMCTYNILLDGLC----------------------------------- 165
L + GI+P+ T NI++ LC
Sbjct: 213 LFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILM 272
Query: 166 ----KCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCI 221
K G + A EV++++ +K ++ YN +I GLC G A M M G
Sbjct: 273 DSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVN 332
Query: 222 HDPITFETIISALFEKGENDKA 243
D T+ T+ISAL ++G+ D+A
Sbjct: 333 PDVFTYNTLISALCKEGKFDEA 354
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 86/167 (51%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNL 71
P V+ +N ++DGY + + A +V N M GV P+V + + +I+G K + +A +
Sbjct: 403 PEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWV 462
Query: 72 LKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 131
+M S KI P+T TYN L+ C G + A++L DEM RG DIITY + LC
Sbjct: 463 KNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCW 522
Query: 132 GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 178
+ K +L+ ++ GI D + IL + R +A V++
Sbjct: 523 KGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYK 569
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 60/122 (49%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L +M+ GVKPNV T N+L+ GY + A V N M + PD +Y++++ C
Sbjct: 427 VLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAAC 486
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + A L +M P+ ITY L+ GLC G++ A LL + G D +
Sbjct: 487 TLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHV 546
Query: 121 TY 122
+
Sbjct: 547 PF 548
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 148 bits (373), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 134/232 (57%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNL 71
P+VVTY S++ GYC ++ +A ++ + M ++G++P ++++++++G K + A +
Sbjct: 275 PDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEI 334
Query: 72 LKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 131
+M S P+ +T+ SLIDG C+ G+VS + L +EM+ RG + TY+ ++ALC
Sbjct: 335 RGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCN 394
Query: 132 GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT 191
+ + K L+ ++ K I P YN ++DG CK G++ +A + +++ KK + T
Sbjct: 395 ENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKIT 454
Query: 192 YNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ +I G C +G EA+++ KM GC D IT +++S L + G +A
Sbjct: 455 FTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 126/260 (48%), Gaps = 36/260 (13%)
Query: 16 TYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQM 75
T+N L+ G C V + KA + M+ G PD+++Y+ +I G CK +N+A + K +
Sbjct: 208 TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
Query: 76 HSEKII-PNTITYNSLIDGLCKTGKVSNAWELLDEM------------------------ 110
S + P+ +TY S+I G CK GK+ A LLD+M
Sbjct: 268 KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
Query: 111 -----HVRGQP------ADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNI 159
+RG+ D++T+ S +D C+ V +G L +++ +G+ P+ TY+I
Sbjct: 328 MLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSI 387
Query: 160 LLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 219
L++ LC R+ A+E+ L K + YN +I+G CK G +EA ++ +ME
Sbjct: 388 LINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKK 447
Query: 220 CIHDPITFETIISALFEKGE 239
C D ITF +I KG
Sbjct: 448 CKPDKITFTILIIGHCMKGR 467
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 115/207 (55%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ G+ P VT+N L+DGY E+ A+ + M G FPDV++++ +I+G C++
Sbjct: 303 MLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQ 362
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V++ L ++M++ + PN TY+ LI+ LC ++ A ELL ++ + YN
Sbjct: 363 VSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNP 422
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D CK V++ +++++ K +PD T+ IL+ G C GR+ +A +F + G
Sbjct: 423 VIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTL 211
+ + T +++++ L K G+ EA L
Sbjct: 483 CSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 116/243 (47%), Gaps = 9/243 (3%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPD---VLSYSIMIN 57
M M GV PN N L+ G+ + + K + F T + F + + ++N
Sbjct: 125 MFECMKSDGVSPN----NRLL-GFLVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLLN 179
Query: 58 GLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPA 117
L K+ V +A+ L + + +T T+N LI GLC GK A ELL M G
Sbjct: 180 TLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEP 239
Query: 118 DIITYNSFLDALCKGHHVDKGIALIKKVIDKGI-QPDMCTYNILLDGLCKCGRIKDAQEV 176
DI+TYN+ + CK + ++K + K V + PD+ TY ++ G CK G++++A +
Sbjct: 240 DIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSL 299
Query: 177 FQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFE 236
D+ + G N T+N +++G K G A + KM GC D +TF ++I
Sbjct: 300 LDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCR 359
Query: 237 KGE 239
G+
Sbjct: 360 VGQ 362
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 116/242 (47%), Gaps = 7/242 (2%)
Query: 6 MKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMV 65
K ++ + TYN L C + A +F M GV P+ +++ + +
Sbjct: 95 FKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKL 154
Query: 66 NEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPA-DIITYNS 124
+ A LL Q S ++ + NSL++ L K +V +A +L DE H+R Q D T+N
Sbjct: 155 HFATALLLQ--SFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDE-HLRFQSCNDTKTFNI 211
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ LC +K + L+ + G +PD+ TYN L+ G CK + A E+F+D+ K G
Sbjct: 212 LIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV-KSG 270
Query: 185 Y--NLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 242
+ + TY +MI+G CK G EA +L+ M G +TF ++ + GE
Sbjct: 271 SVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLT 330
Query: 243 AE 244
AE
Sbjct: 331 AE 332
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 148 bits (373), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 134/232 (57%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNL 71
P+VVTY S++ GYC ++ +A ++ + M ++G++P ++++++++G K + A +
Sbjct: 275 PDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEI 334
Query: 72 LKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 131
+M S P+ +T+ SLIDG C+ G+VS + L +EM+ RG + TY+ ++ALC
Sbjct: 335 RGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCN 394
Query: 132 GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT 191
+ + K L+ ++ K I P YN ++DG CK G++ +A + +++ KK + T
Sbjct: 395 ENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKIT 454
Query: 192 YNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ +I G C +G EA+++ KM GC D IT +++S L + G +A
Sbjct: 455 FTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 126/260 (48%), Gaps = 36/260 (13%)
Query: 16 TYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQM 75
T+N L+ G C V + KA + M+ G PD+++Y+ +I G CK +N+A + K +
Sbjct: 208 TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
Query: 76 HSEKII-PNTITYNSLIDGLCKTGKVSNAWELLDEM------------------------ 110
S + P+ +TY S+I G CK GK+ A LLD+M
Sbjct: 268 KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
Query: 111 -----HVRGQP------ADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNI 159
+RG+ D++T+ S +D C+ V +G L +++ +G+ P+ TY+I
Sbjct: 328 MLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSI 387
Query: 160 LLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 219
L++ LC R+ A+E+ L K + YN +I+G CK G +EA ++ +ME
Sbjct: 388 LINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKK 447
Query: 220 CIHDPITFETIISALFEKGE 239
C D ITF +I KG
Sbjct: 448 CKPDKITFTILIIGHCMKGR 467
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 115/207 (55%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ G+ P VT+N L+DGY E+ A+ + M G FPDV++++ +I+G C++
Sbjct: 303 MLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQ 362
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V++ L ++M++ + PN TY+ LI+ LC ++ A ELL ++ + YN
Sbjct: 363 VSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNP 422
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D CK V++ +++++ K +PD T+ IL+ G C GR+ +A +F + G
Sbjct: 423 VIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTL 211
+ + T +++++ L K G+ EA L
Sbjct: 483 CSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 116/243 (47%), Gaps = 9/243 (3%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPD---VLSYSIMIN 57
M M GV PN N L+ G+ + + K + F T + F + + ++N
Sbjct: 125 MFECMKSDGVSPN----NRLL-GFLVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLLN 179
Query: 58 GLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPA 117
L K+ V +A+ L + + +T T+N LI GLC GK A ELL M G
Sbjct: 180 TLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEP 239
Query: 118 DIITYNSFLDALCKGHHVDKGIALIKKVIDKGI-QPDMCTYNILLDGLCKCGRIKDAQEV 176
DI+TYN+ + CK + ++K + K V + PD+ TY ++ G CK G++++A +
Sbjct: 240 DIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSL 299
Query: 177 FQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFE 236
D+ + G N T+N +++G K G A + KM GC D +TF ++I
Sbjct: 300 LDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCR 359
Query: 237 KGE 239
G+
Sbjct: 360 VGQ 362
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 116/242 (47%), Gaps = 7/242 (2%)
Query: 6 MKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMV 65
K ++ + TYN L C + A +F M GV P+ +++ + +
Sbjct: 95 FKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKL 154
Query: 66 NEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPA-DIITYNS 124
+ A LL Q S ++ + NSL++ L K +V +A +L DE H+R Q D T+N
Sbjct: 155 HFATALLLQ--SFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDE-HLRFQSCNDTKTFNI 211
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ LC +K + L+ + G +PD+ TYN L+ G CK + A E+F+D+ K G
Sbjct: 212 LIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV-KSG 270
Query: 185 Y--NLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 242
+ + TY +MI+G CK G EA +L+ M G +TF ++ + GE
Sbjct: 271 SVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLT 330
Query: 243 AE 244
AE
Sbjct: 331 AE 332
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 147 bits (372), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 134/245 (54%), Gaps = 10/245 (4%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
++ G NV +N LM+ +C ++ AQ VF+ +T+ + P V+S++ +ING CK+
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQ-PADIITYN 123
++E L QM + P+ TY++LI+ LCK K+ A L DEM RG P D+I
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVI--- 347
Query: 124 SFLDALCKGHHVDKGIALIK----KVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
L GH + I L+K K++ KG+QPD+ YN L++G CK G + A+ +
Sbjct: 348 --FTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDG 405
Query: 180 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
+ ++G + TY T+I+G C+ G + AL + +M+ NG D + F ++ + ++G
Sbjct: 406 MIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGR 465
Query: 240 NDKAE 244
AE
Sbjct: 466 VIDAE 470
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 132/235 (56%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
+ K+ ++P VV++N+L++GYC V +++ + + M + PDV +YS +IN LCK
Sbjct: 266 ITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENK 325
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++ A L +M +IPN + + +LI G + G++ E +M +G DI+ YN+
Sbjct: 326 MDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNT 385
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++ CK + ++ +I +G++PD TY L+DG C+ G ++ A E+ +++ + G
Sbjct: 386 LVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNG 445
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
L+ ++ ++ G+CKEG +A + +M G D +T+ ++ A +KG+
Sbjct: 446 IELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGD 500
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 126/238 (52%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M K+G+ PN V + +L+ G+ E++ + + M G+ PD++ Y+ ++NG CK
Sbjct: 336 MCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGD 395
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ A N++ M + P+ ITY +LIDG C+ G V A E+ EM G D + +++
Sbjct: 396 LVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSA 455
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ +CK V +++++ GI+PD TY +++D CK G + ++ +++ G
Sbjct: 456 LVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDG 515
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 242
+ + TYN ++NGLCK G A L+ M + G + D IT+ T++ + K
Sbjct: 516 HVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSK 573
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 71/136 (52%), Gaps = 6/136 (4%)
Query: 2 LAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCK 61
L M++ G+KP+ VTY +MD +C + + M G P V++Y++++NGLCK
Sbjct: 473 LREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCK 532
Query: 62 MKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 121
+ + A LL M + ++P+ ITYN+L++G + S + E+ G AD+ +
Sbjct: 533 LGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEI---GIVADLAS 589
Query: 122 YNSF---LDALCKGHH 134
Y S LD K H
Sbjct: 590 YKSIVNELDRASKDHR 605
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M G P+VVTYN L++G C + ++ A + + M +GV PD ++Y+ ++ G
Sbjct: 507 LLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG-- 564
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGK 99
+ N + + Q I+ + +Y S+++ L + K
Sbjct: 565 HHRHANSSKRYI-QKPEIGIVADLASYKSIVNELDRASK 602
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 147 bits (370), Expect = 9e-36, Method: Composition-based stats.
Identities = 75/240 (31%), Positives = 129/240 (53%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+K PN+ T+ LMDG + AQ +F+ MT G+ P+ ++Y+I+I+GLC+
Sbjct: 189 MLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGS 248
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++A L +M + P+++ +N+L+DG CK G++ A+ELL G + Y+S
Sbjct: 249 ADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSS 308
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D L + + L ++ K I+PD+ Y IL+ GL K G+I+DA ++ + KG
Sbjct: 309 LIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKG 368
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ + + YN +I LC GL +E +L +M + D T +I ++ G +AE
Sbjct: 369 ISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAE 428
Score = 132 bits (333), Expect = 1e-31, Method: Composition-based stats.
Identities = 76/251 (30%), Positives = 125/251 (49%), Gaps = 35/251 (13%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M M +G+ PN VTY L+ G C + A+ +F M G +PD ++++ +++G C
Sbjct: 220 MFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFC 279
Query: 61 KMKMVNEALNLLK-----------------------------------QMHSEKIIPNTI 85
K+ + EA LL+ M + I P+ I
Sbjct: 280 KLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDII 339
Query: 86 TYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKV 145
Y LI GL K GK+ +A +LL M +G D YN+ + ALC +++G +L ++
Sbjct: 340 LYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEM 399
Query: 146 IDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLF 205
+ PD CT+ IL+ +C+ G +++A+E+F ++ K G + + T+N +I+GLCK G
Sbjct: 400 SETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGEL 459
Query: 206 DEALTLMSKME 216
EA L+ KME
Sbjct: 460 KEARLLLHKME 470
Score = 125 bits (315), Expect = 2e-29, Method: Composition-based stats.
Identities = 69/237 (29%), Positives = 128/237 (54%), Gaps = 8/237 (3%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L+ M +G+ P+ YN+++ C + + +++ M++ FPD +++I+I +C
Sbjct: 360 LLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMC 419
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ +V EA + ++ P+ T+N+LIDGLCK+G++ A LL +M V G+PA +
Sbjct: 420 RNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEV-GRPASLF 478
Query: 121 -----TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQE 175
+ N D + + + K + D G PD+ +YN+L++G C+ G I A +
Sbjct: 479 LRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALK 538
Query: 176 VFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIIS 232
+ L KG + ++ TYNT+INGL + G +EA L +D H P + ++++
Sbjct: 539 LLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFR--HSPAVYRSLMT 593
Score = 117 bits (292), Expect = 9e-27, Method: Composition-based stats.
Identities = 77/282 (27%), Positives = 129/282 (45%), Gaps = 39/282 (13%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L + K G + Y+SL+DG +A ++ M + + PD++ Y+I+I GL
Sbjct: 290 LLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLS 349
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + +AL LL M S+ I P+T YN++I LC G + L EM D
Sbjct: 350 KAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDAC 409
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQ------ 174
T+ + ++C+ V + + ++ G P + T+N L+DGLCK G +K+A+
Sbjct: 410 THTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM 469
Query: 175 EV-----------------FQDLFKKGYNLNNW----------------TYNTMINGLCK 201
EV F + + G L + +YN +ING C+
Sbjct: 470 EVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCR 529
Query: 202 EGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
G D AL L++ ++ G D +T+ T+I+ L G ++A
Sbjct: 530 AGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEA 571
Score = 90.9 bits (224), Expect = 8e-19, Method: Composition-based stats.
Identities = 77/304 (25%), Positives = 132/304 (43%), Gaps = 71/304 (23%)
Query: 7 KQGVKPNVVTYNSLMDGYCLVNEVNKAQAV-----------------------FNTMTQM 43
K G P+V T+N+L+DG C E+ +A+ + F+TM +
Sbjct: 436 KSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVES 495
Query: 44 GVF----------------PDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITY 87
G PD++SY+++ING C+ ++ AL LL + + + P+++TY
Sbjct: 496 GSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTY 555
Query: 88 NSLIDGLCKTGKVSNAWELL-DEMHVRGQPAD--------------IITYNSFLDALCKG 132
N+LI+GL + G+ A++L + R PA ++ +N ++ L K
Sbjct: 556 NTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKI 615
Query: 133 HHVDKGIA--------------LIKKVIDKGIQPDMCT---YNILLDGLCKCGRIKDAQE 175
+D A ++++I+ + D T Y I L GLC+ GR +A
Sbjct: 616 SCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALM 675
Query: 176 VFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALF 235
VF L +K + + +I+GLCK D A+ + DN P ++S+L
Sbjct: 676 VFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFKLMPRVCNYLLSSLL 735
Query: 236 EKGE 239
E E
Sbjct: 736 ESTE 739
Score = 53.5 bits (127), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/165 (23%), Positives = 74/165 (44%), Gaps = 15/165 (9%)
Query: 87 YNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVI 146
+ +ID L + W+ L+E+ G D + + A K +K + ++
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 147 DKGIQPDMCTYNILLDGLCKCGRIKDAQEVF--------QDLFKKGYNLNNWTYNTMING 198
+ +PD+ TYN++L R+ +EVF ++ K + N +T+ +++G
Sbjct: 155 EFDCRPDVFTYNVIL-------RVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDG 207
Query: 199 LCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
L K+G +A + M G + +T+ +IS L ++G D A
Sbjct: 208 LYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDA 252
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 147 bits (370), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 131/236 (55%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
GV PN+ YN+L+D C + ++A+ +F+ M ++G+ P+ ++YSI+I+ C+ ++ A
Sbjct: 362 GVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTA 421
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
L+ L +M + + YNSLI+G CK G +S A + EM + ++TY S +
Sbjct: 422 LSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGG 481
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
C ++K + L ++ KGI P + T+ LL GL + G I+DA ++F ++ + N
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN 541
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
TYN MI G C+EG +A + +M + G + D ++ +I L G+ +A+
Sbjct: 542 RVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK 597
Score = 141 bits (355), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 126/239 (52%), Gaps = 5/239 (2%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M + VKPN VTYN +++GYC +++KA MT+ G+ PD SY +I+GLC
Sbjct: 533 MAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQ 592
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+EA + +H N I Y L+ G C+ GK+ A + EM RG D++ Y
Sbjct: 593 ASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGV 652
Query: 125 FLDALCKGHHVDKGI--ALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 182
+D K H D+ + L+K++ D+G++PD Y ++D K G K+A ++ +
Sbjct: 653 LIDGSLK--HKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMIN 710
Query: 183 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
+G N TY +INGLCK G +EA L SKM+ + + +T+ + L KGE D
Sbjct: 711 EGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDIL-TKGEVD 768
Score = 134 bits (338), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 138/241 (57%), Gaps = 2/241 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ G++P+V Y ++ C + ++++A+ + M G +++ Y+++I+GLCK +
Sbjct: 218 MVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQK 277
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMH-VRGQPADIITYN 123
V EA+ + K + + + P+ +TY +L+ GLCK + E++DEM +R P++ +
Sbjct: 278 VWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEA-AVS 336
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
S ++ L K +++ + L+K+V+D G+ P++ YN L+D LCK + +A+ +F + K
Sbjct: 337 SLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKI 396
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
G N+ TY+ +I+ C+ G D AL+ + +M D G + ++I+ + G+ A
Sbjct: 397 GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA 456
Query: 244 E 244
E
Sbjct: 457 E 457
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 123/231 (53%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
L M+ G+K +V YNSL++G+C +++ A+ M + P V++Y+ ++ G C
Sbjct: 424 FLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYC 483
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+N+AL L +M + I P+ T+ +L+ GL + G + +A +L +EM + +
Sbjct: 484 SKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRV 543
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN ++ C+ + K +K++ +KGI PD +Y L+ GLC G+ +A+ L
Sbjct: 544 TYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGL 603
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 231
K LN Y +++G C+EG +EAL++ +M G D + + +I
Sbjct: 604 HKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI 654
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 130/240 (54%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M +G+ P++ T+ +L+ G + A +FN M + V P+ ++Y++MI G C+
Sbjct: 498 MTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGD 557
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+++A LK+M + I+P+T +Y LI GLC TG+ S A +D +H + I Y
Sbjct: 558 MSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTG 617
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
L C+ +++ +++ ++++ +G+ D+ Y +L+DG K K + +++ +G
Sbjct: 618 LLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRG 677
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
++ Y +MI+ K G F EA + M + GC+ + +T+ +I+ L + G ++AE
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Score = 130 bits (327), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%)
Query: 10 VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEAL 69
+KP+VVTY +L+ G C V E + + M + P + S ++ GL K + EAL
Sbjct: 293 LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEAL 352
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
NL+K++ + PN YN+LID LCK K A L D M G + +TY+ +D
Sbjct: 353 NLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMF 412
Query: 130 CKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 189
C+ +D ++ + +++D G++ + YN L++G CK G I A+ ++ K
Sbjct: 413 CRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTV 472
Query: 190 WTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
TY +++ G C +G ++AL L +M G TF T++S LF G
Sbjct: 473 VTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAG 521
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 126/239 (52%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M K G++PN VTY+ L+D +C +++ A + M G+ V Y+ +ING CK
Sbjct: 393 MGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGD 452
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++ A + +M ++K+ P +TY SL+ G C GK++ A L EM +G I T+ +
Sbjct: 453 ISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTT 512
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
L L + + + L ++ + ++P+ TYN++++G C+ G + A E +++ +KG
Sbjct: 513 LLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKG 572
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ ++Y +I+GLC G EA + + C + I + ++ +G+ ++A
Sbjct: 573 IVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEA 631
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 128/243 (52%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M+A M G N+V YN L+DG C +V +A + + + PDV++Y ++ GLC
Sbjct: 249 MIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLC 308
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K++ L ++ +M + P+ +SL++GL K GK+ A L+ + G ++
Sbjct: 309 KVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLF 368
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
YN+ +D+LCKG + L ++ G++P+ TY+IL+D C+ G++ A ++
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
G L+ + YN++ING CK G A M++M + +T+ +++ KG+
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488
Query: 241 DKA 243
+KA
Sbjct: 489 NKA 491
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 124/234 (52%), Gaps = 4/234 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M +G+KP+ V Y S++D + +A +++ M G P+ ++Y+ +INGLC
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKV--SNAWELLDEMHVRGQPAD 118
K VNEA L +M +PN +TY +D L K G+V A EL + + ++G A+
Sbjct: 729 KAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHNAI-LKGLLAN 786
Query: 119 IITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 178
TYN + C+ +++ LI ++I G+ PD TY +++ LC+ +K A E++
Sbjct: 787 TATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWN 846
Query: 179 DLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIIS 232
+ +KG + YNT+I+G C G +A L ++M G I + T T S
Sbjct: 847 SMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTS 900
Score = 123 bits (309), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 120/239 (50%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+++GV ++V Y L+DG + + M G+ PD + Y+ MI+ K
Sbjct: 638 MVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGD 697
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
EA + M +E +PN +TY ++I+GLCK G V+ A L +M + +TY
Sbjct: 698 FKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGC 757
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
FLD L KG + + I KG+ + TYN+L+ G C+ GRI++A E+ + G
Sbjct: 758 FLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDG 817
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ + TY TMIN LC+ +A+ L + M + G D + + T+I GE KA
Sbjct: 818 VSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKA 876
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 126/243 (51%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M+ M+ P+ +SL++G ++ +A + + GV P++ Y+ +I+ LC
Sbjct: 319 MMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLC 378
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + +EA L +M + PN +TY+ LID C+ GK+ A L EM G +
Sbjct: 379 KGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVY 438
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
YNS ++ CK + + ++I+K ++P + TY L+ G C G+I A ++ ++
Sbjct: 439 PYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEM 498
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
KG + +T+ T+++GL + GL +A+ L ++M + + +T+ +I E+G+
Sbjct: 499 TGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDM 558
Query: 241 DKA 243
KA
Sbjct: 559 SKA 561
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 114/229 (49%), Gaps = 1/229 (0%)
Query: 17 YNSLMDGYCLVNEVNKAQAVFNTM-TQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQM 75
++ L+ Y V VF M T++ + P+V + S +++GL K + A+ L M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 76 HSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHV 135
S I P+ Y +I LC+ +S A E++ M G +I+ YN +D LCK V
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 136 DKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTM 195
+ + + K + K ++PD+ TY L+ GLCK + E+ ++ ++ + +++
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 196 INGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ GL K G +EAL L+ ++ D G + + +I +L + + +AE
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAE 387
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 132/239 (55%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
++ G++ N VTYN+L+ C ++ + + N M Q P V++Y+I+INGLCK ++
Sbjct: 305 ILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARL 364
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++ A++ QM +K +P+ +TYN+++ + K G V +A ELL + P +ITYNS
Sbjct: 365 LSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNS 424
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D L K + K + L +++D GI PD T L+ G C+ +++A +V ++ +G
Sbjct: 425 VIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRG 484
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ TY +I GLCK+ + A+ ++ M GC D + I+ + E G +A
Sbjct: 485 NGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEA 543
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 127/243 (52%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L VM+ G P+ +TYN ++ C + A + M+ G PDV++Y+ +I +
Sbjct: 161 ILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMF 220
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+A+ K P ITY L++ +C+ + A E+L++M V G DI+
Sbjct: 221 DYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIV 280
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYNS ++ C+ ++++ ++I+ ++ G++ + TYN LL LC + +E+ +
Sbjct: 281 TYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIM 340
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
++ Y TYN +INGLCK L A+ +M + C+ D +T+ T++ A+ ++G
Sbjct: 341 YQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMV 400
Query: 241 DKA 243
D A
Sbjct: 401 DDA 403
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 126/243 (51%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M +G P++VTYNSL++ C + + +V + G+ + ++Y+ +++ LC
Sbjct: 266 VLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLC 325
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ +E +L M+ P ITYN LI+GLCK +S A + +M + DI+
Sbjct: 326 SHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIV 385
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN+ L A+ K VD I L+ + + P + TYN ++DGL K G +K A E++ +
Sbjct: 386 TYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQM 445
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
G ++ T ++I G C+ L +EA ++ + + G T+ +I L +K E
Sbjct: 446 LDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEI 505
Query: 241 DKA 243
+ A
Sbjct: 506 EMA 508
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 131/245 (53%), Gaps = 4/245 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAV--FNTMTQMGVFPDVLSYSIMING 58
+L M G P+V+TYN+++ C+ + N QA+ + Q G P +++Y++++
Sbjct: 196 LLEDMSLSGSPPDVITYNTVIR--CMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVEL 253
Query: 59 LCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPAD 118
+C+ A+ +L+ M E P+ +TYNSL++ C+ G + ++ + G +
Sbjct: 254 VCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELN 313
Query: 119 IITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 178
+TYN+ L +LC + D+ ++ + P + TYNIL++GLCK + A + F
Sbjct: 314 TVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFY 373
Query: 179 DLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
+ ++ + TYNT++ + KEG+ D+A+ L+ +++ C IT+ ++I L +KG
Sbjct: 374 QMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKG 433
Query: 239 ENDKA 243
KA
Sbjct: 434 LMKKA 438
Score = 111 bits (277), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 122/230 (53%), Gaps = 2/230 (0%)
Query: 16 TYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQM 75
T N ++ C ++ A + M + P S S ++ GL ++ +++A+ +L+ M
Sbjct: 106 TNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVM 165
Query: 76 HSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHV 135
+P+TITYN +I LCK G + A LL++M + G P D+ITYN+ + + +
Sbjct: 166 VMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNA 225
Query: 136 DKGIALIKKVIDKGIQPDMCTYNILLDGLCK-CGRIKDAQEVFQDLFKKGYNLNNWTYNT 194
++ I K + G P M TY +L++ +C+ CG + A EV +D+ +G + TYN+
Sbjct: 226 EQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSAR-AIEVLEDMAVEGCYPDIVTYNS 284
Query: 195 MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
++N C+ G +E +++ + +G + +T+ T++ +L D+ E
Sbjct: 285 LVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVE 334
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 111/209 (53%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L +M + P V+TYN L++G C +++A F M + PD+++Y+ ++ +
Sbjct: 336 ILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMS 395
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K MV++A+ LL + + P ITYNS+IDGL K G + A EL +M G D I
Sbjct: 396 KEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDI 455
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
T S + C+ + V++ ++K+ ++G TY +++ GLCK I+ A EV + +
Sbjct: 456 TRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIM 515
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEAL 209
G + Y ++ G+ + G+ EA+
Sbjct: 516 LTGGCKPDETIYTAIVKGVEEMGMGSEAV 544
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 129/230 (56%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M +QG + YN ++DG+C +VNKA + M G P V++Y +I+GL K+
Sbjct: 578 MKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDR 637
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++EA L ++ S++I N + Y+SLIDG K G++ A+ +L+E+ +G ++ T+NS
Sbjct: 638 LDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNS 697
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
LDAL K +++ + + + + P+ TY IL++GLCK + A +Q++ K+G
Sbjct: 698 LLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQG 757
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
+ +Y TMI+GL K G EA L + + NG + D + +I L
Sbjct: 758 MKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGL 807
Score = 145 bits (365), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 130/239 (54%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ Q P++ N+ MD E K +A+F + PD SYSI+I+GL K
Sbjct: 508 MINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGF 567
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
NE L M + + +T YN +IDG CK GKV+ A++LL+EM +G ++TY S
Sbjct: 568 ANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGS 627
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D L K +D+ L ++ K I+ ++ Y+ L+DG K GRI +A + ++L +KG
Sbjct: 628 VIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
N +T+N++++ L K +EAL M++ C + +T+ +I+ L + + +KA
Sbjct: 688 LTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA 746
Score = 127 bits (318), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 142/273 (52%), Gaps = 35/273 (12%)
Query: 6 MKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMV 65
MK+ PN+ TYN L+D C +++ A + ++M + G+FP+V + +IM++ LCK + +
Sbjct: 369 MKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL 428
Query: 66 NEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEM--------------- 110
+EA + ++M + P+ IT+ SLIDGL K G+V +A+++ ++M
Sbjct: 429 DEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSL 488
Query: 111 ------HVRGQ--------------PADIITYNSFLDALCKGHHVDKGIALIKKVIDKGI 150
H R + D+ N+++D + K +KG A+ +++ +
Sbjct: 489 IKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRF 548
Query: 151 QPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALT 210
PD +Y+IL+ GL K G + E+F + ++G L+ YN +I+G CK G ++A
Sbjct: 549 VPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQ 608
Query: 211 LMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
L+ +M+ G +T+ ++I L + D+A
Sbjct: 609 LLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEA 641
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 114/243 (46%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M G P+V T ++ G N++ + V M + P +Y+ +I
Sbjct: 120 ILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFS 179
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + L L +QM P + +LI G K G+V +A LLDEM ADI+
Sbjct: 180 AVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIV 239
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
YN +D+ K VD ++ G++PD TY ++ LCK R+ +A E+F+ L
Sbjct: 240 LYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL 299
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
K + YNTMI G G FDEA +L+ + G I I + I++ L + G+
Sbjct: 300 EKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKV 359
Query: 241 DKA 243
D+A
Sbjct: 360 DEA 362
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 113/210 (53%)
Query: 10 VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEAL 69
++ NVV Y+SL+DG+ V +++A + + Q G+ P++ +++ +++ L K + +NEAL
Sbjct: 653 IELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEAL 712
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
+ M K PN +TY LI+GLCK K + A+ EM +G I+Y + + L
Sbjct: 713 VCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGL 772
Query: 130 CKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 189
K ++ + AL + G PD YN +++GL R DA +F++ ++G ++N
Sbjct: 773 AKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHN 832
Query: 190 WTYNTMINGLCKEGLFDEALTLMSKMEDNG 219
T +++ L K ++A + + + + G
Sbjct: 833 KTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862
Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 125/278 (44%), Gaps = 36/278 (12%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
++ +M K +P Y +L+ + VN + +F M ++G P V ++ +I G
Sbjct: 155 VVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFA 214
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K V+ AL+LL +M S + + + YN ID K GKV AW+ E+ G D +
Sbjct: 215 KEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEV 274
Query: 121 TYNSFLDALCKGHHVDKGI-----------------------------------ALIKKV 145
TY S + LCK + +D+ + +L+++
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334
Query: 146 IDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLF 205
KG P + YN +L L K G++ +A +VF+++ KK N TYN +I+ LC+ G
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKL 393
Query: 206 DEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
D A L M+ G + T ++ L + + D+A
Sbjct: 394 DTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEA 431
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 93/166 (56%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L +M++G+ PN+ T+NSL+D E+N+A F +M ++ P+ ++Y I+INGLC
Sbjct: 679 ILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLC 738
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K++ N+A ++M + + P+TI+Y ++I GL K G ++ A L D G D
Sbjct: 739 KVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSA 798
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCK 166
YN+ ++ L G+ +L ++ +G+ T +LLD L K
Sbjct: 799 CYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHK 844
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 119/241 (49%), Gaps = 3/241 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M +G +P VVTY S++DG ++ +++A +F + +V+ YS +I+G
Sbjct: 609 LLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFG 668
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K+ ++EA +L+++ + + PN T+NSL+D L K +++ A M + +
Sbjct: 669 KVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQV 728
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY ++ LCK +K +++ +G++P +Y ++ GL K G I +A +F
Sbjct: 729 TYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRF 788
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
G ++ YN MI GL +A +L + G PI +T + L +N
Sbjct: 789 KANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL---PIHNKTCVVLLDTLHKN 845
Query: 241 D 241
D
Sbjct: 846 D 846
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 116/239 (48%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ + N + Y SL+ + ++ M PD+ + ++ + K
Sbjct: 473 MLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGE 532
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ + +++ + + +P+ +Y+ LI GL K G + +EL M +G D YN
Sbjct: 533 PEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNI 592
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D CK V+K L++++ KG +P + TY ++DGL K R+ +A +F++ K
Sbjct: 593 VIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKR 652
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
LN Y+++I+G K G DEA ++ ++ G + T+ +++ AL + E ++A
Sbjct: 653 IELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEA 711
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 93/228 (40%)
Query: 16 TYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQM 75
+YNSL+ + + M+ G P V + M+ G K + E ++++ M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 76 HSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHV 135
K P Y +LI L +M G + + + + K V
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 136 DKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTM 195
D ++L+ ++ + D+ YN+ +D K G++ A + F ++ G + TY +M
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 196 INGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
I LCK DEA+ + +E N + + T+I G+ D+A
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEA 327
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 124/230 (53%), Gaps = 1/230 (0%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G+ PN+VTY +++ GY ++ A+ V M G +PD +Y+++++G CK+ +EA
Sbjct: 221 GLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEA 280
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
++ M +I PN +TY +I LCK K A + DEM R D +DA
Sbjct: 281 ATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDA 340
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
LC+ H VD+ L +K++ PD + L+ LCK GR+ +A+++F D F+KG +
Sbjct: 341 LCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLF-DEFEKGSIPS 399
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
TYNT+I G+C++G EA L M + C + T+ +I L + G
Sbjct: 400 LLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNG 449
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 125/243 (51%), Gaps = 1/243 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M+ +G P+ TY LMDGYC + ++A V + M + + P+ ++Y +MI LC
Sbjct: 248 VLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALC 307
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K K EA N+ +M +P++ +ID LC+ KV A L +M D
Sbjct: 308 KEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNA 367
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
++ + LCK V + L + +KG P + TYN L+ G+C+ G + +A ++ D+
Sbjct: 368 LLSTLIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDM 426
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+++ N +TYN +I GL K G E + ++ +M + GC + TF + L + G+
Sbjct: 427 YERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKE 486
Query: 241 DKA 243
+ A
Sbjct: 487 EDA 489
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 121/237 (51%), Gaps = 1/237 (0%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVF-NTMTQMGVFPDVLSYSIMINGLCKMKMVNE 67
GVK +V + N+L++ + A+F N+ G+ P++ + ++++ LCK +
Sbjct: 150 GVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIES 209
Query: 68 ALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 127
A +L ++ S ++PN +TY +++ G G + +A +L+EM RG D TY +D
Sbjct: 210 AYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMD 269
Query: 128 ALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
CK + ++ + I+P+ TY +++ LCK + +A+ +F ++ ++ +
Sbjct: 270 GYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMP 329
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
++ +I+ LC++ DEA L KM N C+ D T+I L ++G +A
Sbjct: 330 DSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEAR 386
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 98/176 (55%), Gaps = 1/176 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M M+++ P+ ++D C ++V++A ++ M + PD S +I+ LC
Sbjct: 318 MFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLC 377
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K V EA L + I P+ +TYN+LI G+C+ G+++ A L D+M+ R +
Sbjct: 378 KEGRVTEARKLFDEFEKGSI-PSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAF 436
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 176
TYN ++ L K +V +G+ +++++++ G P+ T+ IL +GL K G+ +DA ++
Sbjct: 437 TYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKI 492
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 76/141 (53%), Gaps = 3/141 (2%)
Query: 6 MKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMV 65
++G P+++TYN+L+ G C E+ +A +++ M + P+ +Y+++I GL K V
Sbjct: 392 FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNV 451
Query: 66 NEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 125
E + +L++M PN T+ L +GL K GK +A +++ M V D ++ F
Sbjct: 452 KEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVS-MAVMNGKVDKESWELF 510
Query: 126 LDALCKGHHVDKGIALIKKVI 146
L +DKG+ +K+++
Sbjct: 511 LKKF--AGELDKGVLPLKELL 529
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 145 bits (366), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 133/257 (51%), Gaps = 23/257 (8%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M +G+ P++ +YN LMDG C + ++ A+ + M + GV PD ++Y +++G C
Sbjct: 348 VLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYC 407
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ V+ A +LL++M +PN T N L+ L K G++S A ELL +M+ +G D +
Sbjct: 408 SVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTV 467
Query: 121 TYNSFLDALCKGHHVDKGIALIK-----------------------KVIDKGIQPDMCTY 157
T N +D LC +DK I ++K +I+ PD+ TY
Sbjct: 468 TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITY 527
Query: 158 NILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMED 217
+ LL+GLCK GR +A+ +F ++ + ++ YN I+ CK+G A ++ ME
Sbjct: 528 STLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEK 587
Query: 218 NGCIHDPITFETIISAL 234
GC T+ ++I L
Sbjct: 588 KGCHKSLETYNSLILGL 604
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 134/248 (54%), Gaps = 4/248 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M GV PN V YN+++ +C + ++ + M + G+ PD+++++ I+ LC
Sbjct: 204 LLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALC 263
Query: 61 KMKMVNEALNLLKQMHSEKII----PNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQP 116
K V +A + M ++ + PN+ITYN ++ G CK G + +A L + +
Sbjct: 264 KEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDL 323
Query: 117 ADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 176
A + +YN +L L + + ++K++ DKGI P + +YNIL+DGLCK G + DA+ +
Sbjct: 324 ASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTI 383
Query: 177 FQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFE 236
+ + G + TY +++G C G D A +L+ +M N C+ + T ++ +L++
Sbjct: 384 VGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWK 443
Query: 237 KGENDKAE 244
G +AE
Sbjct: 444 MGRISEAE 451
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 134/257 (52%), Gaps = 23/257 (8%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALN 70
+PN +TYN ++ G+C V + A+ +F ++ + + SY+I + GL + EA
Sbjct: 288 RPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAET 347
Query: 71 LLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 130
+LKQM + I P+ +YN L+DGLCK G +S+A ++ M G D +TY L C
Sbjct: 348 VLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYC 407
Query: 131 KGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 190
VD +L+++++ P+ T NILL L K GRI +A+E+ + + +KGY L+
Sbjct: 408 SVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTV 467
Query: 191 TYNTMINGLCKEGLFDEALTLMSKME-----------------------DNGCIHDPITF 227
T N +++GLC G D+A+ ++ M +N C+ D IT+
Sbjct: 468 TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITY 527
Query: 228 ETIISALFEKGENDKAE 244
T+++ L + G +A+
Sbjct: 528 STLLNGLCKAGRFAEAK 544
Score = 130 bits (328), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 122/215 (56%), Gaps = 4/215 (1%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G+ P T+N L+ C + V+ A+ +F+ M + G P+ ++ I++ G CK + ++
Sbjct: 142 GIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
L LL M S ++PN + YN+++ C+ G+ ++ +++++M G DI+T+NS + A
Sbjct: 202 LELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISA 261
Query: 129 LCK-GHHVDKGIALIKKVIDKGI---QPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
LCK G +D +D+ + +P+ TYN++L G CK G ++DA+ +F+ + +
Sbjct: 262 LCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREND 321
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 219
+ +YN + GL + G F EA T++ +M D G
Sbjct: 322 DLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKG 356
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 116/238 (48%), Gaps = 4/238 (1%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALN 70
KP+V YN L++ V ++ M G+ P +++++I LC V+ A
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 71 LLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 130
L +M + PN T+ L+ G CK G ELL+ M G + + YN+ + + C
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 131 KGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY----N 186
+ D +++K+ ++G+ PD+ T+N + LCK G++ DA +F D+ Y
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 187 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
N+ TYN M+ G CK GL ++A TL + +N + ++ + L G+ +AE
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAE 346
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 118/231 (51%), Gaps = 23/231 (9%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMG---------------- 44
+L M ++G + VT N ++DG C E++KA + M G
Sbjct: 453 LLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVD 512
Query: 45 -------VFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKT 97
PD+++YS ++NGLCK EA NL +M EK+ P+++ YN I CK
Sbjct: 513 DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQ 572
Query: 98 GKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTY 157
GK+S+A+ +L +M +G + TYNS + L + + + L+ ++ +KGI P++CTY
Sbjct: 573 GKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTY 632
Query: 158 NILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 208
N + LC+ +++DA + ++ +K N +++ +I CK FD A
Sbjct: 633 NTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMA 683
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 123/266 (46%), Gaps = 34/266 (12%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNL 71
P+++TY++L++G C +A+ +F M + PD ++Y+I I+ CK ++ A +
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 72 LKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 131
LK M + + TYNSLI GL ++ L+DEM +G +I TYN+ + LC+
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCE 641
Query: 132 GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD------------ 179
G V+ L+ +++ K I P++ ++ L++ CK AQEVF+
Sbjct: 642 GEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLY 701
Query: 180 ----------------------LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMED 217
+ +G+ L + Y ++ LCK+ + A ++ KM D
Sbjct: 702 SLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMID 761
Query: 218 NGCIHDPITFETIISALFEKGENDKA 243
G DP +I L + G +A
Sbjct: 762 RGYGFDPAALMPVIDGLGKMGNKKEA 787
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 131/302 (43%), Gaps = 58/302 (19%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFP------------- 47
++ +M + GV P+ VTY L+ GYC V +V+ A+++ M + P
Sbjct: 383 IVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLW 442
Query: 48 ----------------------DVLSYSIMINGLCKMKMVNEALNLLKQMH--------- 76
D ++ +I+++GLC +++A+ ++K M
Sbjct: 443 KMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGN 502
Query: 77 --------------SEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 122
+P+ ITY++L++GLCK G+ + A L EM D + Y
Sbjct: 503 LGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAY 562
Query: 123 NSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 182
N F+ CK + ++K + KG + TYN L+ GL +I + + ++ +
Sbjct: 563 NIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKE 622
Query: 183 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 242
KG + N TYNT I LC+ ++A L+ +M + +F+ +I A + + D
Sbjct: 623 KGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDM 682
Query: 243 AE 244
A+
Sbjct: 683 AQ 684
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 108/216 (50%), Gaps = 3/216 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M K+G ++ TYNSL+ G + N++ + + + M + G+ P++ +Y+ I LC
Sbjct: 581 VLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLC 640
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLD-EMHVRGQPADI 119
+ + V +A NLL +M + I PN ++ LI+ CK A E+ + + + GQ +
Sbjct: 641 EGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL 700
Query: 120 ITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
Y+ + L + K L++ V+D+G + Y L++ LCK ++ A +
Sbjct: 701 --YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHK 758
Query: 180 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM 215
+ +GY + +I+GL K G EA + KM
Sbjct: 759 MIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKM 794
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 145 bits (366), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 126/234 (53%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+K GV PN+ YN L+ G+C + +A + + M + + PDV +Y+I+INGLC
Sbjct: 330 MVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQ 389
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V EA L ++M +E+I P++ TYNSLI G CK + A +L EM G +IIT+++
Sbjct: 390 VAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFST 449
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D C + + L ++ KGI PD+ TY L+D K +K+A ++ D+ + G
Sbjct: 450 LIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAG 509
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
+ N+ T+ +++G KEG A+ + + + F +I L + G
Sbjct: 510 IHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNG 563
Score = 140 bits (353), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 130/231 (56%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M G+KPNV Y + C N++ +A+ +F M + GV P++ +YS MI+G C
Sbjct: 221 LLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYC 280
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K V +A L K++ +++PN + + +L+DG CK ++ A L M G ++
Sbjct: 281 KTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLY 340
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
YN + CK ++ + + L+ ++ + PD+ TY IL++GLC ++ +A +FQ +
Sbjct: 341 VYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKM 400
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 231
+ ++ TYN++I+G CKE ++AL L S+M +G + ITF T+I
Sbjct: 401 KNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLI 451
Score = 130 bits (328), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 124/243 (51%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M +M K GV PN+ TY++++DGYC V +A ++ + + P+V+ + +++G C
Sbjct: 256 MFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFC 315
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + + A +L M + PN YN LI G CK+G + A LL EM D+
Sbjct: 316 KARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVF 375
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY ++ LC V + L +K+ ++ I P TYN L+ G CK ++ A ++ ++
Sbjct: 376 TYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEM 435
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
G N T++T+I+G C A+ L +M G + D +T+ +I A F++
Sbjct: 436 TASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANM 495
Query: 241 DKA 243
+A
Sbjct: 496 KEA 498
Score = 128 bits (321), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 125/231 (54%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L+ M + P+V TY L++G C+ ++V +A +F M +FP +Y+ +I+G C
Sbjct: 361 LLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYC 420
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + +AL+L +M + + PN IT+++LIDG C + A L EM ++G D++
Sbjct: 421 KEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVV 480
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY + +DA K ++ + + L +++ GI P+ T+ L+DG K GR+ A + +Q+
Sbjct: 481 TYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQEN 540
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 231
++ N+ + +I GLC+ G A S M G D ++ +++
Sbjct: 541 NQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSML 591
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 117/228 (51%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
+M+ +G+ P+V Y L +K + + + MT +G+ P+V Y+I I LC+
Sbjct: 189 LMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDN 248
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
+ EA + + M ++PN TY+++IDG CKTG V A+ L E+ V +++ +
Sbjct: 249 KMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFG 308
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ +D CK + +L ++ G+ P++ YN L+ G CK G + +A + ++
Sbjct: 309 TLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESL 368
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 231
+ + +TY +INGLC E EA L KM++ T+ ++I
Sbjct: 369 NLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLI 416
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 7/207 (3%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M GV+PN++T+++L+DGYC V ++ A ++ MT G+ PDV++Y+ +I+ K
Sbjct: 435 MTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEAN 494
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ EAL L M I PN T+ L+DG K G++S A + E + + + + +
Sbjct: 495 MKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTC 554
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++ LC+ ++ + + GI PD+C+Y +L G + RI D + D+ K G
Sbjct: 555 LIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTG 614
Query: 185 YNLNNWTYNTMI------NGLCKEGLF 205
L N N ++ NG K F
Sbjct: 615 I-LPNLLVNQLLARFYQANGYVKSACF 640
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%)
Query: 19 SLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSE 78
S+++G + + M G+ PDV Y ++ K + ++ LL +M S
Sbjct: 169 SILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSL 228
Query: 79 KIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKG 138
I PN Y I LC+ K+ A ++ + M G ++ TY++ +D CK +V +
Sbjct: 229 GIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQA 288
Query: 139 IALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMING 198
L K+++ + P++ + L+DG CK + A+ +F + K G + N + YN +I+G
Sbjct: 289 YGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHG 348
Query: 199 LCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
CK G EA+ L+S+ME D T+ +I+ L
Sbjct: 349 HCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGL 384
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 92/188 (48%), Gaps = 3/188 (1%)
Query: 52 YSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMH 111
+S++I +M + EAL + ++M K P++ S+++GL + + + W M
Sbjct: 135 FSLLIMEFLEMGLFEEALWVSREM---KCSPDSKACLSILNGLVRRRRFDSVWVDYQLMI 191
Query: 112 VRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIK 171
RG D+ Y K K L+ ++ GI+P++ Y I + LC+ +++
Sbjct: 192 SRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKME 251
Query: 172 DAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 231
+A+++F+ + K G N +TY+ MI+G CK G +A L ++ + + + F T++
Sbjct: 252 EAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLV 311
Query: 232 SALFEKGE 239
+ E
Sbjct: 312 DGFCKARE 319
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 145 bits (365), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 135/236 (57%), Gaps = 1/236 (0%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G++PNVV YN+L+ G+C + KA +VF+ M ++G P++ +Y +ING K ++ A
Sbjct: 347 GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGA 406
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
+ + +M + PN + Y ++++ LC+ K A L++ M + T+N+F+
Sbjct: 407 VYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKG 466
Query: 129 LCKGHHVDKGIALIKKVIDK-GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
LC +D + +++ + P++ TYN LLDGL K RI++A + +++F +G
Sbjct: 467 LCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEW 526
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
++ TYNT+++G C GL AL L+ KM +G D IT II A ++G+ ++A
Sbjct: 527 SSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERA 582
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 131/271 (48%), Gaps = 41/271 (15%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G P+V YN ++D N + V+ M + G P+V +Y++++ LCK V+ A
Sbjct: 141 GCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGA 200
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
LL +M ++ P+ ++Y ++I +C+ G V EL + R +P + YN+ ++
Sbjct: 201 KKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAE----RFEPV-VSVYNALING 255
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
LCK H L++++++KGI P++ +Y+ L++ LC G+I+ A + K+G + N
Sbjct: 256 LCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPN 315
Query: 189 NWT------------------------------------YNTMINGLCKEGLFDEALTLM 212
+T YNT++ G C G +A+++
Sbjct: 316 IYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVF 375
Query: 213 SKMEDNGCIHDPITFETIISALFEKGENDKA 243
S ME+ GC + T+ ++I+ ++G D A
Sbjct: 376 SHMEEIGCSPNIRTYGSLINGFAKRGSLDGA 406
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 118/242 (48%), Gaps = 5/242 (2%)
Query: 6 MKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMV 65
+ + +P V YN+L++G C ++ A + M + G+ P+V+SYS +IN LC +
Sbjct: 238 LAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQI 297
Query: 66 NEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRG---QPADIITY 122
A + L QM PN T +SL+ G G +A +L ++M +RG QP +++ Y
Sbjct: 298 ELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQM-IRGFGLQP-NVVAY 355
Query: 123 NSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 182
N+ + C ++ K +++ + + G P++ TY L++G K G + A ++ +
Sbjct: 356 NTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLT 415
Query: 183 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 242
G N Y M+ LC+ F EA +L+ M C TF I L + G D
Sbjct: 416 SGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDW 475
Query: 243 AE 244
AE
Sbjct: 476 AE 477
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 111/209 (53%), Gaps = 1/209 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M + G PN+ TY SL++G+ ++ A ++N M G P+V+ Y+ M+ LC+
Sbjct: 378 MEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSK 437
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQ-PADIITYN 123
EA +L++ M E P+ T+N+ I GLC G++ A ++ +M + + P +I+TYN
Sbjct: 438 FKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYN 497
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
LD L K + +++ L +++ +G++ TYN LL G C G A ++ +
Sbjct: 498 ELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVD 557
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLM 212
G + + T N +I CK+G + A ++
Sbjct: 558 GKSPDEITMNMIILAYCKQGKAERAAQML 586
Score = 110 bits (275), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 121/241 (50%), Gaps = 2/241 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+++G+ PNV++Y++L++ C ++ A + M + G P++ + S ++ G
Sbjct: 272 MVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGT 331
Query: 65 VNEALNLLKQM-HSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
+AL+L QM + PN + YN+L+ G C G + A + M G +I TY
Sbjct: 332 TFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYG 391
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
S ++ K +D + + K++ G P++ Y +++ LC+ + K+A+ + + + K+
Sbjct: 392 SLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKE 451
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKME-DNGCIHDPITFETIISALFEKGENDK 242
+ T+N I GLC G D A + +ME + C + +T+ ++ L + ++
Sbjct: 452 NCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEE 511
Query: 243 A 243
A
Sbjct: 512 A 512
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 119/238 (50%), Gaps = 5/238 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M QG + + S++ Y V +A +F + + G P V Y+ +++ L
Sbjct: 98 LLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLL 157
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + + M + PN TYN L+ LCK KV A +LL EM +G D +
Sbjct: 158 GENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAV 217
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
+Y + + ++C+ V +G L ++ +P + YN L++GLCK K A E+ +++
Sbjct: 218 SYTTVISSMCEVGLVKEGRELAER-----FEPVVSVYNALINGLCKEHDYKGAFELMREM 272
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
+KG + N +Y+T+IN LC G + A + +++M GC + T +++ F +G
Sbjct: 273 VEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRG 330
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 104/200 (52%), Gaps = 3/200 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQM-GVFPDVLSYSIMINGL 59
++ +M K+ P+V T+N+ + G C ++ A+ VF M Q P++++Y+ +++GL
Sbjct: 444 LIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGL 503
Query: 60 CKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADI 119
K + EA L +++ + ++ TYN+L+ G C G A +L+ +M V G+ D
Sbjct: 504 AKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDE 563
Query: 120 ITYNSFLDALCKGHHVDKGIALIKKVI--DKGIQPDMCTYNILLDGLCKCGRIKDAQEVF 177
IT N + A CK ++ ++ V + +PD+ +Y ++ GLC+ +D +
Sbjct: 564 ITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILL 623
Query: 178 QDLFKKGYNLNNWTYNTMIN 197
+ + G + T++ +IN
Sbjct: 624 ERMISAGIVPSIATWSVLIN 643
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 88/172 (51%), Gaps = 1/172 (0%)
Query: 68 ALNLLKQMHSEKIIPNT-ITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 126
AL+ K + + + +T +T+ +I L G+V + LL +M ++G + S +
Sbjct: 59 ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVI 118
Query: 127 DALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 186
+ ++ + + ++ + G P + YN +LD L RI+ V++D+ + G+
Sbjct: 119 SVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFE 178
Query: 187 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
N +TYN ++ LCK D A L+ +M + GC D +++ T+IS++ E G
Sbjct: 179 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVG 230
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 95/224 (42%), Gaps = 30/224 (13%)
Query: 50 LSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDE 109
L++ +MI L V+ LL+QM + + + S+I + G A E+
Sbjct: 77 LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136
Query: 110 MHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGR 169
+ G + YN LD L + + + + + G +P++ TYN+LL LCK +
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 170 IKDAQEVFQD------------------------LFKKGYNLNNW------TYNTMINGL 199
+ A+++ + L K+G L YN +INGL
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGL 256
Query: 200 CKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
CKE + A LM +M + G + I++ T+I+ L G+ + A
Sbjct: 257 CKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELA 300
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 144 bits (364), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 131/244 (53%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M K+ + PN VTYN+L++G+ +V A + N M G+ P+ ++++ +I+G
Sbjct: 325 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 384
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
EAL + M ++ + P+ ++Y L+DGLCK + A M G I
Sbjct: 385 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 444
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY +D LCK +D+ + L+ ++ GI PD+ TY+ L++G CK GR K A+E+ +
Sbjct: 445 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 504
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
++ G + N Y+T+I C+ G EA+ + M G D TF ++++L + G+
Sbjct: 505 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 564
Query: 241 DKAE 244
+AE
Sbjct: 565 AEAE 568
Score = 144 bits (363), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 127/240 (52%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M K G P +VTYN+++ YC A + + M GV DV +Y+++I+ LC+
Sbjct: 259 MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNR 318
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ + LL+ M I PN +TYN+LI+G GKV A +LL+EM G + +T+N+
Sbjct: 319 IAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNA 378
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D + + + + + KG+ P +Y +LLDGLCK A+ + + + G
Sbjct: 379 LIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG 438
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ TY MI+GLCK G DEA+ L+++M +G D +T+ +I+ + G A+
Sbjct: 439 VCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAK 498
Score = 138 bits (348), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 129/243 (53%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M+ G+ PN VT+N+L+DG+ +A +F M G+ P +SY ++++GLC
Sbjct: 360 LLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLC 419
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + A +M + ITY +IDGLCK G + A LL+EM G DI+
Sbjct: 420 KNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIV 479
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY++ ++ CK ++ ++ G+ P+ Y+ L+ C+ G +K+A +++ +
Sbjct: 480 TYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAM 539
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+G+ +++T+N ++ LCK G EA M M +G + + ++F+ +I+ GE
Sbjct: 540 ILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEG 599
Query: 241 DKA 243
KA
Sbjct: 600 LKA 602
Score = 130 bits (328), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 121/236 (51%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G P+V T N+++ E + M + + PDV +++I+IN LC ++
Sbjct: 193 GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKS 252
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
L+++M P +TYN+++ CK G+ A ELLD M +G AD+ TYN +
Sbjct: 253 SYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHD 312
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
LC+ + + KG L++ + + I P+ TYN L++G G++ A ++ ++ G + N
Sbjct: 313 LCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPN 372
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ T+N +I+G EG F EAL + ME G +++ ++ L + E D A
Sbjct: 373 HVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLAR 428
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 126/240 (52%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M K G+ P++VTY++L++G+C V A+ + + ++G+ P+ + YS +I C
Sbjct: 465 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 524
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+M + EA+ + + M E + T+N L+ LCK GKV+ A E + M G + +
Sbjct: 525 RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTV 584
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
+++ ++ K ++ ++ G P TY LL GLCK G +++A++ + L
Sbjct: 585 SFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL 644
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
++ YNT++ +CK G +A++L +M + D T+ ++IS L KG+
Sbjct: 645 HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKT 704
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 139/278 (50%), Gaps = 35/278 (12%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M +M +G+ P+ V+Y L+DG C E + A+ + M + GV ++Y+ MI+GLC
Sbjct: 395 MFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLC 454
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K ++EA+ LL +M + I P+ +TY++LI+G CK G+ A E++ ++ G + I
Sbjct: 455 KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 514
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQE----- 175
Y++ + C+ + + I + + +I +G D T+N+L+ LCK G++ +A+E
Sbjct: 515 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCM 574
Query: 176 ------------------------------VFQDLFKKGYNLNNWTYNTMINGLCKEGLF 205
VF ++ K G++ +TY +++ GLCK G
Sbjct: 575 TSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL 634
Query: 206 DEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
EA + + D + + T+++A+ + G KA
Sbjct: 635 REAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKA 672
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 124/243 (51%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
L M+K+ + P+V T+N L++ C K+ + M + G P +++Y+ +++ C
Sbjct: 220 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 279
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K A+ LL M S+ + + TYN LI LC++ +++ + LL +M R + +
Sbjct: 280 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 339
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN+ ++ V L+ +++ G+ P+ T+N L+DG G K+A ++F +
Sbjct: 340 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 399
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
KG + +Y +++GLCK FD A +M+ NG IT+ +I L + G
Sbjct: 400 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 459
Query: 241 DKA 243
D+A
Sbjct: 460 DEA 462
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 109/231 (47%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
N Y+ L+ Y + + +F M G P V + + ++ + K + L
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 221
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 132
K+M KI P+ T+N LI+ LC G + L+ +M G I+TYN+ L CK
Sbjct: 222 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 281
Query: 133 HHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 192
I L+ + KG+ D+CTYN+L+ LC+ RI + +D+ K+ + N TY
Sbjct: 282 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 341
Query: 193 NTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
NT+ING EG A L+++M G + +TF +I +G +A
Sbjct: 342 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEA 392
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 120/268 (44%), Gaps = 36/268 (13%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M G+ PN V+++ L++GY E KA +VF+ MT++G P +Y ++ GLCK
Sbjct: 574 MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 633
Query: 65 VNEALNLLKQMHS-----------------------------------EKIIPNTITYNS 89
+ EA LK +H+ I+P++ TY S
Sbjct: 634 LREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTS 693
Query: 90 LIDGLCKTGKVSNAWELLDEMHVRGQP-ADIITYNSFLDALCKGHHVDKGIALIKKVIDK 148
LI GLC+ GK A E RG + + Y F+D + K GI +++ +
Sbjct: 694 LISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNL 753
Query: 149 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 208
G PD+ T N ++DG + G+I+ ++ ++ + N TYN +++G K +
Sbjct: 754 GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTS 813
Query: 209 LTLMSKMEDNGCIHDPITFETIISALFE 236
L + NG + D +T +++ + E
Sbjct: 814 FLLYRSIILNGILPDKLTCHSLVLGICE 841
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 118/235 (50%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G P++VT N+++DGY + ++ K + M P++ +Y+I+++G K K V+ +
Sbjct: 754 GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTS 813
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
L + + I+P+ +T +SL+ G+C++ + ++L RG D T+N +
Sbjct: 814 FLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISK 873
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
C ++ L+K + GI D T + ++ L + R ++++ V ++ K+G +
Sbjct: 874 CCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPE 933
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ Y +INGLC+ G A + +M + + ++ AL + G+ D+A
Sbjct: 934 SRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA 988
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 116/237 (48%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L + +GV+ + T+N L+ C E+N A + MT +G+ D + M++ L
Sbjct: 851 ILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLN 910
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ E+ +L +M + I P + Y LI+GLC+ G + A+ + +EM +
Sbjct: 911 RNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNV 970
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
++ + AL K D+ L++ ++ + P + ++ L+ CK G + +A E+ +
Sbjct: 971 AESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVM 1030
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK 237
G L+ +YN +I GLC +G A L +M+ +G + + T++ +I L +
Sbjct: 1031 SNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLAR 1087
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 112/231 (48%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M Q PN+ TYN L+ GY +V+ + ++ ++ G+ PD L+ ++ G+C
Sbjct: 781 LLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGIC 840
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ M+ L +LK + + T+N LI C G+++ A++L+ M G D
Sbjct: 841 ESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKD 900
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
T ++ + L + H + ++ ++ +GI P+ Y L++GLC+ G IK A V +++
Sbjct: 901 TCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEM 960
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 231
N + M+ L K G DEA L+ M + +F T++
Sbjct: 961 IAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM 1011
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 115/233 (49%)
Query: 7 KQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVN 66
+ V PN V Y +DG + M +G PD+++ + MI+G +M +
Sbjct: 717 RGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIE 776
Query: 67 EALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 126
+ +LL +M ++ PN TYN L+ G K VS ++ L + + G D +T +S +
Sbjct: 777 KTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLV 836
Query: 127 DALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 186
+C+ + ++ G+ ++K I +G++ D T+N+L+ C G I A ++ + + G +
Sbjct: 837 LGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGIS 896
Query: 187 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
L+ T + M++ L + F E+ ++ +M G + + +I+ L G+
Sbjct: 897 LDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGD 949
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 112/222 (50%), Gaps = 1/222 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
++ VM G+ + T ++++ + +++ V + M++ G+ P+ Y +INGLC
Sbjct: 886 LVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLC 945
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++ + A + ++M + KI P + ++++ L K GK A LL M I
Sbjct: 946 RVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIA 1005
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
++ + + CK +V + + L + + G++ D+ +YN+L+ GLC G + A E+++++
Sbjct: 1006 SFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEM 1065
Query: 181 FKKGYNLNNWTYNTMING-LCKEGLFDEALTLMSKMEDNGCI 221
G+ N TY +I G L +E F A ++ + G I
Sbjct: 1066 KGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFI 1107
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 132/240 (55%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
+M +G + TY + G C+ VNKA V + G DV +Y+ +I+ LCK K
Sbjct: 384 LMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKK 443
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
+ EA NL+K+M + N+ N+LI GL + ++ A L EM G +++YN
Sbjct: 444 RLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYN 503
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ LCK + A +K++++ G +PD+ TY+ILL GLC+ +I A E++ +
Sbjct: 504 ILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQS 563
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
G + +N +I+GLC G D+A+T+M+ ME C + +T+ T++ F+ G++++A
Sbjct: 564 GLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRA 623
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 134/244 (54%), Gaps = 2/244 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
L M K+G KP+V +Y+++++ +++ A +F+ M++ GV PDV Y+I+I+G
Sbjct: 171 FLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFL 230
Query: 61 KMKMVNEALNLLKQM-HSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADI 119
K K A+ L ++ + PN T+N +I GL K G+V + ++ + M + D+
Sbjct: 231 KEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDL 290
Query: 120 ITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
TY+S + LC +VDK ++ ++ ++ D+ TYN +L G C+CG+IK++ E+++
Sbjct: 291 YTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRI 350
Query: 180 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
+ K ++N +YN +I GL + G DEA + M G D T+ I L G
Sbjct: 351 MEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGY 409
Query: 240 NDKA 243
+KA
Sbjct: 410 VNKA 413
Score = 131 bits (330), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 129/232 (55%), Gaps = 1/232 (0%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G +P + +YN+L++ + + K +++F GV P++ +Y+++I CK K +A
Sbjct: 109 GCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKA 168
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
L M E P+ +Y+++I+ L K GK+ +A EL DEM RG D+ YN +D
Sbjct: 169 RGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDG 228
Query: 129 LCKGHHVDKGIALIKKVI-DKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
K + L +++ D + P++ T+NI++ GL KCGR+ D ++++ + +
Sbjct: 229 FLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREK 288
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
+ +TY+++I+GLC G D+A ++ +++++ D +T+ T++ G+
Sbjct: 289 DLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGK 340
Score = 130 bits (327), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 124/244 (50%), Gaps = 2/244 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ A GV PN+ TYN L+ C E KA+ + M + G PDV SYS +IN L
Sbjct: 136 LFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLA 195
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDE-MHVRGQPADI 119
K +++AL L +M + P+ YN LIDG K A EL D + ++
Sbjct: 196 KAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNV 255
Query: 120 ITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
T+N + L K VD + + +++ + D+ TY+ L+ GLC G + A+ VF +
Sbjct: 256 KTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNE 315
Query: 180 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
L ++ +++ TYNTM+ G C+ G E+L L ME + + +++ +I L E G+
Sbjct: 316 LDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGK 374
Query: 240 NDKA 243
D+A
Sbjct: 375 IDEA 378
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 104/199 (52%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
L M K G +P VV+YN L+ G C + +A A M + G PD+ +YSI++ GLC
Sbjct: 486 FLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLC 545
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + ++ AL L Q + + + +N LI GLC GK+ +A ++ M R A+++
Sbjct: 546 RDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLV 605
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN+ ++ K ++ + + G+QPD+ +YN ++ GLC C + A E F D
Sbjct: 606 TYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDA 665
Query: 181 FKKGYNLNNWTYNTMINGL 199
G +T+N ++ +
Sbjct: 666 RNHGIFPTVYTWNILVRAV 684
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 109/216 (50%), Gaps = 2/216 (0%)
Query: 31 NKAQAVFNTMTQM-GVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNS 89
++A VF M ++ G P + SY+ ++N + K + +L + + PN TYN
Sbjct: 95 DQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNV 154
Query: 90 LIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKG 149
LI CK + A LD M G D+ +Y++ ++ L K +D + L ++ ++G
Sbjct: 155 LIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERG 214
Query: 150 IQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW-TYNTMINGLCKEGLFDEA 208
+ PD+ YNIL+DG K K A E++ L + N T+N MI+GL K G D+
Sbjct: 215 VAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDC 274
Query: 209 LTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
L + +M+ N D T+ ++I L + G DKAE
Sbjct: 275 LKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAE 310
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 110/233 (47%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M K GV+ N N+L+ G + + +A M + G P V+SY+I+I GLCK
Sbjct: 455 MSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGK 514
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
EA +K+M P+ TY+ L+ GLC+ K+ A EL + G D++ +N
Sbjct: 515 FGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNI 574
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ LC +D + ++ + + ++ TYN L++G K G A ++ ++K G
Sbjct: 575 LIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMG 634
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK 237
+ +YNT++ GLC A+ ++G T+ ++ A+ +
Sbjct: 635 LQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVNR 687
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 101/213 (47%), Gaps = 2/213 (0%)
Query: 33 AQAVFNTMTQM-GVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLI 91
A A+F++ T+ G + Y ++ L + +MVN +++ + S++ + S+I
Sbjct: 26 AFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVI 85
Query: 92 DGLCKTGKVSNAWELLDEMH-VRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGI 150
K A ++ M + G I +YN+ L+A + K +L G+
Sbjct: 86 KTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGV 145
Query: 151 QPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALT 210
P++ TYN+L+ CK + A+ ++K+G+ + ++Y+T+IN L K G D+AL
Sbjct: 146 APNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALE 205
Query: 211 LMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
L +M + G D + +I ++ ++ A
Sbjct: 206 LFDEMSERGVAPDVTCYNILIDGFLKEKDHKTA 238
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 142/278 (51%), Gaps = 35/278 (12%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L++++ G PNVVT+ +L++G+C E+++A +F M Q G+ PD+++YS +I+G
Sbjct: 273 LLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYF 332
Query: 61 KM-------KMVNEALN----------------------------LLKQMHSEKIIPNTI 85
K K+ ++AL+ + K+M + I PN +
Sbjct: 333 KAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVV 392
Query: 86 TYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKV 145
TY LI GLC+ G++ A+ + ++ RG I+TY+S +D CK ++ G AL + +
Sbjct: 393 TYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452
Query: 146 IDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLF 205
I G PD+ Y +L+DGL K G + A + + LN +N++I+G C+ F
Sbjct: 453 IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRF 512
Query: 206 DEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
DEAL + M G D TF T++ +G ++A
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEA 550
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 126/234 (53%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ + + +GVK +VV ++S +D Y ++ A V+ M G+ P+V++Y+I+I GLC
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + EA + Q+ + P+ +TY+SLIDG CK G + + + L ++M G P D++
Sbjct: 403 QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
Y +D L K + + K++ + I+ ++ +N L+DG C+ R +A +VF+ +
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
G + T+ T++ EG +EAL L +M G D + + T+I A
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAF 576
Score = 124 bits (310), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 126/235 (53%), Gaps = 1/235 (0%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
++M++G + +V+ N ++ G V+++ A + + + G P+V+++ +ING CK
Sbjct: 242 LVMERGFRVGIVSCNKVLKGLS-VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRG 300
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
++ A +L K M I P+ I Y++LIDG K G + +L + +G D++ ++
Sbjct: 301 EMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFS 360
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
S +D K + + K+++ +GI P++ TY IL+ GLC+ GRI +A ++ + K+
Sbjct: 361 STIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR 420
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
G + TY+++I+G CK G L M G D + + ++ L ++G
Sbjct: 421 GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 114/223 (51%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ Q ++ NVV +NSL+DG+C +N ++A VF M G+ PDV +++ ++
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGR 546
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ EAL L +M + P+ + Y +LID CK K + +L D M ADI N
Sbjct: 547 LEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNV 606
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ L K H ++ +I+ ++PD+ TYN ++ G C R+ +A+ +F+ L
Sbjct: 607 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTP 666
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITF 227
+ N T +I+ LCK D A+ + S M + G + +T+
Sbjct: 667 FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTY 709
Score = 120 bits (302), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 128/278 (46%), Gaps = 35/278 (12%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M ++K+G++P++VTY+SL+DG+C + A++ M +MG PDV+ Y ++++GL
Sbjct: 413 MYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLS 472
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K ++ A+ +M + I N + +NSLIDG C+ + A ++ M + G D+
Sbjct: 473 KQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVA 532
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLC--------------- 165
T+ + + +++ + L ++ G++PD Y L+D C
Sbjct: 533 TFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLM 592
Query: 166 --------------------KCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLF 205
KC RI+DA + F +L + + TYNTMI G C
Sbjct: 593 QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRL 652
Query: 206 DEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
DEA + ++ + +T +I L + + D A
Sbjct: 653 DEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGA 690
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 105/180 (58%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
+++ ++P++VTYN+++ GYC + +++A+ +F + P+ ++ +I+I+ LCK
Sbjct: 627 LIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNND 686
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++ A+ + M + PN +TY L+D K+ + +++L +EM +G I++Y+
Sbjct: 687 MDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSI 746
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D LCK VD+ + + ID + PD+ Y IL+ G CK GR+ +A +++ + + G
Sbjct: 747 IIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNG 806
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 115/232 (49%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ QG+ PNVVTY L+ G C + +A ++ + + G+ P +++YS +I+G CK
Sbjct: 382 MLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGN 441
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ L + M P+ + Y L+DGL K G + +A +M + +++ +NS
Sbjct: 442 LRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNS 501
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D C+ + D+ + + + + GI+PD+ T+ ++ GR+++A +F +FK G
Sbjct: 502 LIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMG 561
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFE 236
+ Y T+I+ CK L L M+ N D +I LF+
Sbjct: 562 LEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFK 613
Score = 111 bits (277), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 111/254 (43%), Gaps = 35/254 (13%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCL-----------------------------------VNE 29
M K G++P+ + Y +L+D +C +
Sbjct: 557 MFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHR 616
Query: 30 VNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNS 89
+ A FN + + + PD+++Y+ MI G C ++ ++EA + + + PNT+T
Sbjct: 617 IEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTI 676
Query: 90 LIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKG 149
LI LCK + A + M +G + +TY +D K ++ L +++ +KG
Sbjct: 677 LIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKG 736
Query: 150 IQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEAL 209
I P + +Y+I++DGLCK GR+ +A +F + Y +I G CK G EA
Sbjct: 737 ISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAA 796
Query: 210 TLMSKMEDNGCIHD 223
L M NG D
Sbjct: 797 LLYEHMLRNGVKPD 810
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 119/266 (44%), Gaps = 35/266 (13%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G+KP+V T+ ++M + + +A +F M +MG+ PD L+Y +I+ CK
Sbjct: 526 GIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIG 585
Query: 69 LNLLKQMHSEKII-----------------------------------PNTITYNSLIDG 93
L L M KI P+ +TYN++I G
Sbjct: 586 LQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICG 645
Query: 94 LCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPD 153
C ++ A + + + V + +T + LCK + +D I + + +KG +P+
Sbjct: 646 YCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPN 705
Query: 154 MCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMS 213
TY L+D K I+ + ++F+++ +KG + + +Y+ +I+GLCK G DEA +
Sbjct: 706 AVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFH 765
Query: 214 KMEDNGCIHDPITFETIISALFEKGE 239
+ D + D + + +I + G
Sbjct: 766 QAIDAKLLPDVVAYAILIRGYCKVGR 791
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M ++M ++G KPN VTY LMD + ++ + +F M + G+ P ++SYSI+I+GLC
Sbjct: 693 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLC 752
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRG-QPADI 119
K V+EA N+ Q K++P+ + Y LI G CK G++ A L + M G +P D+
Sbjct: 753 KRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 812
Query: 120 I 120
+
Sbjct: 813 L 813
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 104/224 (46%), Gaps = 8/224 (3%)
Query: 20 LMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEK 79
LM+ C V+KA +F TQ+GV S M+N L V+ + ++
Sbjct: 152 LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGG 211
Query: 80 IIPNTITYNSLI-DGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDK- 137
I P+ ++ + + D L G+V+ A + + RG I++ N L KG VD+
Sbjct: 212 IEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVL----KGLSVDQI 267
Query: 138 --GIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTM 195
L+ V+D G P++ T+ L++G CK G + A ++F+ + ++G + Y+T+
Sbjct: 268 EVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTL 327
Query: 196 INGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
I+G K G+ L S+ G D + F + I + G+
Sbjct: 328 IDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 51/86 (59%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M ++G+ P++V+Y+ ++DG C V++A +F+ + PDV++Y+I+I G CK+
Sbjct: 732 MQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGR 791
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSL 90
+ EA L + M + P+ + +L
Sbjct: 792 LVEAALLYEHMLRNGVKPDDLLQRAL 817
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 130/240 (54%), Gaps = 3/240 (1%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFP-DVLSYSIMINGLCKMK 63
M + G ++ ++N+++D C V KA +F + G F D ++Y++++NG C +K
Sbjct: 152 MHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALR--GRFSVDTVTYNVILNGWCLIK 209
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
+AL +LK+M I PN TYN+++ G + G++ +AWE EM R D++TY
Sbjct: 210 RTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYT 269
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ + + + + ++I +G+ P + TYN ++ LCK +++A +F+++ ++
Sbjct: 270 TVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRR 329
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
GY N TYN +I GL G F LM +ME+ GC + T+ +I E E +KA
Sbjct: 330 GYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKA 389
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 118/229 (51%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
+ VTYN +++G+CL+ KA V M + G+ P++ +Y+ M+ G + + A
Sbjct: 194 DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFF 253
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 132
+M + +TY +++ G G++ A + DEM G + TYN+ + LCK
Sbjct: 254 LEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKK 313
Query: 133 HHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 192
+V+ + + ++++ +G +P++ TYN+L+ GL G +E+ Q + +G N TY
Sbjct: 314 DNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTY 373
Query: 193 NTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
N MI + ++AL L KM C+ + T+ +IS +F + ++
Sbjct: 374 NMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSE 422
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 120/244 (49%), Gaps = 1/244 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
++ M + P+ T+ + + Y + +KA +F M + G F D+ S++ +++ LC
Sbjct: 113 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC 172
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K K V +A L + + + +T+TYN +++G C + A E+L EM RG ++
Sbjct: 173 KSKRVEKAYELFRALRG-RFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN+ L + + ++ + + D+ TY ++ G G IK A+ VF ++
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEM 291
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
++G + TYN MI LCK+ + A+ + +M G + T+ +I LF GE
Sbjct: 292 IREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEF 351
Query: 241 DKAE 244
+ E
Sbjct: 352 SRGE 355
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 108/199 (54%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M+++G+ PN+ TYN+++ G+ ++ A F M + DV++Y+ +++G
Sbjct: 217 VLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFG 276
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ A N+ +M E ++P+ TYN++I LCK V NA + +EM RG ++
Sbjct: 277 VAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVT 336
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN + L +G L++++ ++G +P+ TYN+++ +C ++ A +F+ +
Sbjct: 337 TYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKM 396
Query: 181 FKKGYNLNNWTYNTMINGL 199
N TYN +I+G+
Sbjct: 397 GSGDCLPNLDTYNILISGM 415
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 96/197 (48%), Gaps = 1/197 (0%)
Query: 48 DVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELL 107
D S+ + I+ ++ + +L+ +M S +I P+ T+ + + GK A +L
Sbjct: 90 DASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLF 149
Query: 108 DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKC 167
MH G D+ ++N+ LD LCK V+K L + + + D TYN++L+G C
Sbjct: 150 LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLI 208
Query: 168 GRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITF 227
R A EV +++ ++G N N TYNTM+ G + G A +M+ C D +T+
Sbjct: 209 KRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTY 268
Query: 228 ETIISALFEKGENDKAE 244
T++ GE +A
Sbjct: 269 TTVVHGFGVAGEIKRAR 285
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 89/168 (52%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M K+ + +VVTY +++ G+ + E+ +A+ VF+ M + GV P V +Y+ MI LCK
Sbjct: 256 MKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDN 315
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V A+ + ++M PN TYN LI GL G+ S EL+ M G + TYN
Sbjct: 316 VENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNM 375
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKD 172
+ + V+K + L +K+ P++ TYNIL+ G+ R +D
Sbjct: 376 MIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSED 423
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 103/203 (50%), Gaps = 1/203 (0%)
Query: 35 AVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGL 94
++ + M + + P +++I+ ++A+ L MH + ++N+++D L
Sbjct: 112 SLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVL 171
Query: 95 CKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDM 154
CK+ +V A+EL + R D +TYN L+ C K + ++K+++++GI P++
Sbjct: 172 CKSKRVEKAYELFRALRGRFS-VDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNL 230
Query: 155 CTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSK 214
TYN +L G + G+I+ A E F ++ K+ ++ TY T+++G G A + +
Sbjct: 231 TTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDE 290
Query: 215 MEDNGCIHDPITFETIISALFEK 237
M G + T+ +I L +K
Sbjct: 291 MIREGVLPSVATYNAMIQVLCKK 313
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 141 bits (356), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 133/243 (54%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ A M++ G+ P+ TY SL+ C +V + + VF+ M V PD++ +S M++
Sbjct: 327 VFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFT 386
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ +++AL + +IP+ + Y LI G C+ G +S A L +EM +G D++
Sbjct: 387 RSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVV 446
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN+ L LCK + + L ++ ++ + PD T IL+DG CK G +++A E+FQ +
Sbjct: 447 TYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM 506
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+K L+ TYNT+++G K G D A + + M + PI++ +++AL KG
Sbjct: 507 KEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHL 566
Query: 241 DKA 243
+A
Sbjct: 567 AEA 569
Score = 137 bits (345), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 124/221 (56%), Gaps = 2/221 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M ++ ++ +VVTYN+L+DG+ V +++ A+ ++ M + P +SYSI++N LC
Sbjct: 506 MKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGH 565
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ EA + +M S+ I P + NS+I G C++G S+ L++M G D I+YN+
Sbjct: 566 LAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNT 625
Query: 125 FLDALCKGHHVDKGIALIKKVIDK--GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 182
+ + ++ K L+KK+ ++ G+ PD+ TYN +L G C+ ++K+A+ V + + +
Sbjct: 626 LIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIE 685
Query: 183 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHD 223
+G N + TY MING + EA + +M G D
Sbjct: 686 RGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 122/237 (51%)
Query: 7 KQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVN 66
+ G+ P+ V Y L+ GYC ++ A + N M Q G DV++Y+ +++GLCK KM+
Sbjct: 403 EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLG 462
Query: 67 EALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 126
EA L +M + P++ T LIDG CK G + NA EL +M + D++TYN+ L
Sbjct: 463 EADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLL 522
Query: 127 DALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 186
D K +D + ++ K I P +Y+IL++ LC G + +A V+ ++ K
Sbjct: 523 DGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIK 582
Query: 187 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
N+MI G C+ G + + + KM G + D I++ T+I + KA
Sbjct: 583 PTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKA 639
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 119/231 (51%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
L+ + ++GV P++VTYN+L+ Y + +A + N M G P V +Y+ +INGLC
Sbjct: 257 FLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLC 316
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K A + +M + P++ TY SL+ CK G V ++ +M R D++
Sbjct: 317 KHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLV 376
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
++S + + ++DK + V + G+ PD Y IL+ G C+ G I A + ++
Sbjct: 377 CFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEM 436
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 231
++G ++ TYNT+++GLCK + EA L ++M + D T +I
Sbjct: 437 LQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILI 487
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 117/211 (55%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M + V P++V ++S+M + ++KA FN++ + G+ PD + Y+I+I G C+ M
Sbjct: 366 MRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGM 425
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++ A+NL +M + + +TYN+++ GLCK + A +L +EM R D T
Sbjct: 426 ISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTI 485
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D CK ++ + L +K+ +K I+ D+ TYN LLDG K G I A+E++ D+ K
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKM 215
+Y+ ++N LC +G EA + +M
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEM 576
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 119/239 (49%), Gaps = 3/239 (1%)
Query: 7 KQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVN 66
+ GV NV T N +++ C ++ K + + + GV+PD+++Y+ +I+ ++
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 67 EALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 126
EA L+ M + P TYN++I+GLCK GK A E+ EM G D TY S L
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
Query: 127 DALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 186
CK V + + + + + PD+ ++ ++ + G + A F + + G
Sbjct: 348 MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407
Query: 187 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK---GENDK 242
+N Y +I G C++G+ A+ L ++M GC D +T+ TI+ L ++ GE DK
Sbjct: 408 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADK 466
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 133/270 (49%), Gaps = 37/270 (13%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++QG +VVTYN+++ G C + +A +FN MT+ +FPD + +I+I+G CK+
Sbjct: 436 MLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGN 495
Query: 65 VNEALNLLKQMH-----------------------------------SEKIIPNTITYNS 89
+ A+ L ++M S++I+P I+Y+
Sbjct: 496 LQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSI 555
Query: 90 LIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKG 149
L++ LC G ++ A+ + DEM + ++ NS + C+ + G + ++K+I +G
Sbjct: 556 LVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEG 615
Query: 150 IQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK--GYNLNNWTYNTMINGLCKEGLFDE 207
PD +YN L+ G + + A + + + ++ G + +TYN++++G C++ E
Sbjct: 616 FVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKE 675
Query: 208 ALTLMSKMEDNGCIHDPITFETIISALFEK 237
A ++ KM + G D T+ +I+ +
Sbjct: 676 AEVVLRKMIERGVNPDRSTYTCMINGFVSQ 705
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 114/231 (49%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
N ++ L+ Y ++ +A F + G + + + +I L ++ V A +
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 132
+++ + N T N +++ LCK GK+ L ++ +G DI+TYN+ + A
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 133 HHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 192
+++ L+ + KG P + TYN +++GLCK G+ + A+EVF ++ + G + ++ TY
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 193 NTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+++ CK+G E + S M + D + F +++S G DKA
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKA 394
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 65/120 (54%), Gaps = 2/120 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMT--QMGVFPDVLSYSIMING 58
L M+ +G P+ ++YN+L+ G+ ++KA + M Q G+ PDV +Y+ +++G
Sbjct: 607 FLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHG 666
Query: 59 LCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPAD 118
C+ + EA +L++M + P+ TY +I+G ++ A+ + DEM RG D
Sbjct: 667 FCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 100/214 (46%), Gaps = 8/214 (3%)
Query: 34 QAVFNTMTQMGVFPDVLS---YSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSL 90
A+ + + + G D S I +G+ ++++VN + S N ++ L
Sbjct: 117 SAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGS-----NDSVFDLL 171
Query: 91 IDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGI 150
I + K+ A E + +G I N+ + +L + V+ + +++ G+
Sbjct: 172 IRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGV 231
Query: 151 QPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALT 210
++ T NI+++ LCK G+++ + +KG + TYNT+I+ +GL +EA
Sbjct: 232 GINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFE 291
Query: 211 LMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
LM+ M G T+ T+I+ L + G+ ++A+
Sbjct: 292 LMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAK 325
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 141 bits (355), Expect = 4e-34, Method: Composition-based stats.
Identities = 70/245 (28%), Positives = 139/245 (56%), Gaps = 2/245 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L +M + GV+PN++ N+ +D + N + KA M +G+ P+V++Y+ MI G C
Sbjct: 264 VLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYC 323
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEM-HVRGQPADI 119
+ V EA+ LL+ MHS+ +P+ ++Y +++ LCK ++ +L+ +M G D
Sbjct: 324 DLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQ 383
Query: 120 ITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
+TYN+ + L K H D+ + +K +KG + D Y+ ++ LCK GR+ +A+++ +
Sbjct: 384 VTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINE 443
Query: 180 LFKKGYNLNN-WTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
+ KG+ + TY ++NG C+ G D+A L+ M +G + +++ +++ + G
Sbjct: 444 MLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTG 503
Query: 239 ENDKA 243
++ +A
Sbjct: 504 KSLEA 508
Score = 137 bits (344), Expect = 9e-33, Method: Composition-based stats.
Identities = 80/279 (28%), Positives = 141/279 (50%), Gaps = 37/279 (13%)
Query: 2 LAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCK 61
L M G+ PNVVTYN ++ GYC ++ V +A + M G PD +SY ++ LCK
Sbjct: 300 LERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCK 359
Query: 62 MKMVNEALNLLKQMHSEK-IIPNTITYNSLID---------------------------- 92
K + E +L+K+M E ++P+ +TYN+LI
Sbjct: 360 EKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKL 419
Query: 93 -------GLCKTGKVSNAWELLDEMHVRGQ-PADIITYNSFLDALCKGHHVDKGIALIKK 144
LCK G++S A +L++EM +G P D++TY + ++ C+ VDK L++
Sbjct: 420 GYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQV 479
Query: 145 VIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGL 204
+ G +P+ +Y LL+G+C+ G+ +A+E+ + ++ N+ TY+ +++GL +EG
Sbjct: 480 MHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGK 539
Query: 205 FDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
EA ++ +M G P+ ++ +L G +A
Sbjct: 540 LSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEA 578
Score = 130 bits (328), Expect = 6e-31, Method: Composition-based stats.
Identities = 74/246 (30%), Positives = 131/246 (53%), Gaps = 2/246 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L +M ++G+ ++ +M Y ++ A V M + GV P++L + I+
Sbjct: 229 VLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFV 288
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + +AL L++M I+PN +TYN +I G C +V A ELL++MH +G D +
Sbjct: 289 RANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKV 348
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVI-DKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
+Y + + LCK + + L+KK+ + G+ PD TYN L+ L K +A +D
Sbjct: 349 SYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKD 408
Query: 180 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG-CIHDPITFETIISALFEKG 238
+KG+ ++ Y+ +++ LCKEG EA L+++M G C D +T+ +++ G
Sbjct: 409 AQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLG 468
Query: 239 ENDKAE 244
E DKA+
Sbjct: 469 EVDKAK 474
Score = 127 bits (319), Expect = 8e-30, Method: Composition-based stats.
Identities = 67/238 (28%), Positives = 129/238 (54%), Gaps = 1/238 (0%)
Query: 5 MMKQG-VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
M+ +G P+VVTY ++++G+C + EV+KA+ + M G P+ +SY+ ++NG+C+
Sbjct: 444 MLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTG 503
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
EA ++ PN+ITY+ ++ GL + GK+S A +++ EM ++G + N
Sbjct: 504 KSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEIN 563
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
L +LC+ + +++ ++KG ++ + ++ G C+ + A V D++
Sbjct: 564 LLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLI 623
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
+ + +TY T+++ L K+G EA LM KM G P+T+ T+I + G+ D
Sbjct: 624 NKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVD 681
Score = 114 bits (286), Expect = 5e-26, Method: Composition-based stats.
Identities = 56/215 (26%), Positives = 117/215 (54%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L VM G KPN V+Y +L++G C + +A+ + N + P+ ++YS++++GL
Sbjct: 476 LLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLR 535
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ ++EA +++++M + P + N L+ LC+ G+ A + ++E +G +++
Sbjct: 536 REGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVV 595
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
+ + + C+ +D ++++ + D+ TY L+D L K GRI +A E+ + +
Sbjct: 596 NFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKM 655
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM 215
KG + TY T+I+ C+ G D+ + ++ KM
Sbjct: 656 LHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKM 690
Score = 95.5 bits (236), Expect = 3e-20, Method: Composition-based stats.
Identities = 58/231 (25%), Positives = 114/231 (49%), Gaps = 1/231 (0%)
Query: 15 VTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQ 74
+ Y S+++ ++ V M + G++ ++S ++ + + +AL +L
Sbjct: 208 MVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTL 267
Query: 75 MHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 134
M + PN + N+ ID + ++ A L+ M V G +++TYN + C H
Sbjct: 268 MQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHR 327
Query: 135 VDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK-GYNLNNWTYN 193
V++ I L++ + KG PD +Y ++ LCK RI + +++ + + K+ G + TYN
Sbjct: 328 VEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYN 387
Query: 194 TMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
T+I+ L K DEAL + ++ G D + + I+ AL ++G +A+
Sbjct: 388 TLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAK 438
Score = 88.2 bits (217), Expect = 4e-18, Method: Composition-based stats.
Identities = 58/240 (24%), Positives = 118/240 (49%), Gaps = 2/240 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ +G P V N L+ C ++A+ G +V++++ +I+G C+
Sbjct: 550 MVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDE 609
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++ AL++L M+ + TY +L+D L K G+++ A EL+ +M +G +TY +
Sbjct: 610 LDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRT 669
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ C+ VD +A+++K+I + Q YN +++ LC G++++A + + +
Sbjct: 670 VIHRYCQMGKVDDLVAILEKMISR--QKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTA 727
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ T ++ G K+G+ A + +M + I D E + L KG+ D+A+
Sbjct: 728 SRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEAD 787
Score = 85.9 bits (211), Expect = 2e-17, Method: Composition-based stats.
Identities = 50/197 (25%), Positives = 102/197 (51%), Gaps = 1/197 (0%)
Query: 48 DVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELL 107
D + Y M+ L K K+ + +L M I ++ ++ + G++ +A ++L
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265
Query: 108 DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKC 167
M G +++ N+ +D + + ++K + ++++ GI P++ TYN ++ G C
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325
Query: 168 GRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM-EDNGCIHDPIT 226
R+++A E+ +D+ KG + +Y T++ LCKE E LM KM +++G + D +T
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVT 385
Query: 227 FETIISALFEKGENDKA 243
+ T+I L + D+A
Sbjct: 386 YNTLIHMLTKHDHADEA 402
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 141 bits (355), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 127/243 (52%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ VM +KP++VTYN+++ GYC + KA M G D ++Y MI
Sbjct: 244 VFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACY 303
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ L ++M + I ++ +I GLCK GK++ + + + M +G ++
Sbjct: 304 ADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVA 363
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
Y +D K V+ I L+ ++ID+G +PD+ TY+++++GLCK GR+++A + F
Sbjct: 364 IYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTC 423
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
G +N+ Y+++I+GL K G DEA L +M + GC D + +I A + +
Sbjct: 424 RFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKV 483
Query: 241 DKA 243
D+A
Sbjct: 484 DEA 486
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 126/231 (54%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
V N+L+ + + V + V+ M + G+ P + +Y+ ++NGL V+ A +
Sbjct: 186 TVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF 245
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 132
+ M S +I P+ +TYN++I G CK G+ A E L +M RG AD ITY + + A
Sbjct: 246 EVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYAD 305
Query: 133 HHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 192
+AL +++ +KGIQ +++++ GLCK G++ + VF+++ +KG N Y
Sbjct: 306 SDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIY 365
Query: 193 NTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+I+G K G ++A+ L+ +M D G D +T+ +++ L + G ++A
Sbjct: 366 TVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEA 416
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 131/307 (42%), Gaps = 75/307 (24%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+++G KPNV Y L+DGY V A + + M G PDV++YS+++NGLCK
Sbjct: 353 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 412
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V EAL+ + + N++ Y+SLIDGL K G+V A L +EM +G D YN+
Sbjct: 413 VEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNA 472
Query: 125 FLDALCKGHHVDKGIALIKKV------------------------------------IDK 148
+DA K VD+ IAL K++ IDK
Sbjct: 473 LIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDK 532
Query: 149 GIQPDMCTYNILLDGLC----------------------------------KCGRIKDAQ 174
GI P + L GLC K GRIK+A
Sbjct: 533 GITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMINTLCKAGRIKEAC 592
Query: 175 EVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLM-SKM----EDNGCIHDPITFET 229
++ + ++G + MIN L K G D A+ LM SK+ E G + + F T
Sbjct: 593 KLADGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGYERMGSVKRRVKFTT 652
Query: 230 IISALFE 236
++ F+
Sbjct: 653 LLETCFD 659
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 120/245 (48%), Gaps = 4/245 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M+ +G KP+VVTY+ +++G C V +A F+T G+ + + YS +I+GL
Sbjct: 384 LLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLG 443
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEM-HVRGQPADI 119
K V+EA L ++M + ++ YN+LID K KV A L M G +
Sbjct: 444 KAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTV 503
Query: 120 ITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
TY L + K H ++ + L +IDKGI P + L GLC G++ A ++ +
Sbjct: 504 YTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDE 563
Query: 180 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETI-ISALFEKG 238
L G L+ MIN LCK G EA L + + G P T+ I+AL + G
Sbjct: 564 LAPMGVILDA-ACEDMINTLCKAGRIKEACKLADGITERG-REVPGRIRTVMINALRKVG 621
Query: 239 ENDKA 243
+ D A
Sbjct: 622 KADLA 626
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 104/231 (45%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
N+ Y SL+D L +V++ + V + + + V + + +I K+ MV E L +
Sbjct: 151 NLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVW 210
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 132
++M I P TYN L++GL V +A + + M DI+TYN+ + CK
Sbjct: 211 RKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKA 270
Query: 133 HHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 192
K + ++ + +G + D TY ++ ++Q++ +KG + +
Sbjct: 271 GQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAF 330
Query: 193 NTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ +I GLCKEG +E T+ M G + + +I + G + A
Sbjct: 331 SLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDA 381
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%)
Query: 78 EKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDK 137
+K N Y SL+D L V + E+ P + N+ + + K V++
Sbjct: 146 KKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEE 205
Query: 138 GIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMIN 197
+ + +K+ + GI+P + TYN L++GL + A+ VF+ + + TYNTMI
Sbjct: 206 LLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIK 265
Query: 198 GLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALF 235
G CK G +A+ + ME G D IT+ T+I A +
Sbjct: 266 GYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACY 303
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 140 bits (354), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 133/234 (56%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+K+G+KP+ TY+ L+ G +N+V +A ++ + G+ PDV +YS+MI+G CK +
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 625
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
E +M S+ + PNT+ YN LI C++G++S A EL ++M +G + TY S
Sbjct: 626 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 685
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ + V++ L +++ +G++P++ Y L+DG K G++ + + +++ K
Sbjct: 686 LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKN 745
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
+ N TY MI G ++G EA L+++M + G + D IT++ I ++G
Sbjct: 746 VHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 132/236 (55%)
Query: 8 QGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNE 67
+GV P+V + + ++ +C +V +A +F+ M + GV P+V++++ +I+GL +E
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313
Query: 68 ALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 127
A ++M + P ITY+ L+ GL + ++ +A+ +L EM +G P ++I YN+ +D
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373
Query: 128 ALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
+ + ++K I + ++ KG+ TYN L+ G CK G+ +A+ + +++ G+N+
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 433
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
N ++ ++I LC +FD AL + +M T+IS L + G++ KA
Sbjct: 434 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 489
Score = 130 bits (327), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 134/278 (48%), Gaps = 35/278 (12%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ + M + GV PNVVT+N+++DG + ++A M + G+ P +++YSI++ GL
Sbjct: 282 LFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLT 341
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTI----------------------------------- 85
+ K + +A +LK+M + PN I
Sbjct: 342 RAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSS 401
Query: 86 TYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKV 145
TYN+LI G CK G+ NA LL EM G + ++ S + LC D + + ++
Sbjct: 402 TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEM 461
Query: 146 IDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLF 205
+ + + P L+ GLCK G+ A E++ KG+ ++ T N +++GLC+ G
Sbjct: 462 LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL 521
Query: 206 DEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
DEA + ++ GC+ D +++ T+IS K + D+A
Sbjct: 522 DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 559
Score = 114 bits (285), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 120/243 (49%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M K+G PNV+ YN+L+D + +NKA + + M G+ +Y+ +I G C
Sbjct: 352 VLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYC 411
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + A LLK+M S N ++ S+I LC +A + EM +R
Sbjct: 412 KNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGG 471
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
+ + LCK K + L + ++KG D T N LL GLC+ G++ +A + +++
Sbjct: 472 LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 531
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+G ++ +YNT+I+G C + DEA + +M G D T+ +I LF +
Sbjct: 532 LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV 591
Query: 241 DKA 243
++A
Sbjct: 592 EEA 594
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 117/240 (48%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
+ +G + T N+L+ G C ++++A + + G D +SY+ +I+G C K
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 555
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++EA L +M + P+ TY+ LI GL KV A + D+ G D+ TY+
Sbjct: 556 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 615
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D CK ++G +++ K +QP+ YN L+ C+ GR+ A E+ +D+ KG
Sbjct: 616 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 675
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ N+ TY ++I G+ +EA L +M G + + +I + G+ K E
Sbjct: 676 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 735
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 112/230 (48%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ + + P +L+ G C + +KA ++ G D + + +++GLC+
Sbjct: 461 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 520
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++EA + K++ + + ++YN+LI G C K+ A+ LDEM RG D TY+
Sbjct: 521 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 580
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ L + V++ I G+ PD+ TY++++DG CK R ++ QE F ++ K
Sbjct: 581 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
N YN +I C+ G AL L M+ G + T+ ++I +
Sbjct: 641 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 114/228 (50%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
+M+ +G+ TYN+L+ GYC + + A+ + M +G + S++ +I LC
Sbjct: 390 LMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL 449
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
M + AL + +M + P +LI GLCK GK S A EL + +G D T N
Sbjct: 450 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 509
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ L LC+ +D+ + K+++ +G D +YN L+ G C ++ +A ++ K+
Sbjct: 510 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 231
G +N+TY+ +I GL +EA+ + NG + D T+ +I
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 617
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 109/215 (50%), Gaps = 7/215 (3%)
Query: 33 AQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVN---EALNLLKQMHSEKIIPNTITYNS 89
A VF + G+FP + +I++ L + EA +++ + + P+ + +
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV----CKGVSPDVYLFTT 265
Query: 90 LIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKG 149
I+ CK GKV A +L +M G +++T+N+ +D L D+ +K++++G
Sbjct: 266 AINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERG 325
Query: 150 IQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEAL 209
++P + TY+IL+ GL + RI DA V +++ KKG+ N YN +I+ + G ++A+
Sbjct: 326 MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAI 385
Query: 210 TLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ M G T+ T+I + G+ D AE
Sbjct: 386 EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAE 420
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
MM + V+PN V YN L+ YC ++ A + M G+ P+ +Y+ +I G+ +
Sbjct: 636 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V EA L ++M E + PN Y +LIDG K G++ LL EMH + + ITY
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDA 173
+ + +V + L+ ++ +KGI PD TY + G K G + +A
Sbjct: 756 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 60/105 (57%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M +G++PNV Y +L+DGY + ++ K + + M V P+ ++Y++MI G +
Sbjct: 706 MRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGN 765
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDE 109
V EA LL +M + I+P++ITY I G K G V A++ DE
Sbjct: 766 VTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 140 bits (354), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 133/234 (56%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+K+G+KP+ TY+ L+ G +N+V +A ++ + G+ PDV +YS+MI+G CK +
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 625
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
E +M S+ + PNT+ YN LI C++G++S A EL ++M +G + TY S
Sbjct: 626 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 685
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ + V++ L +++ +G++P++ Y L+DG K G++ + + +++ K
Sbjct: 686 LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKN 745
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
+ N TY MI G ++G EA L+++M + G + D IT++ I ++G
Sbjct: 746 VHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 132/236 (55%)
Query: 8 QGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNE 67
+GV P+V + + ++ +C +V +A +F+ M + GV P+V++++ +I+GL +E
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313
Query: 68 ALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 127
A ++M + P ITY+ L+ GL + ++ +A+ +L EM +G P ++I YN+ +D
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373
Query: 128 ALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
+ + ++K I + ++ KG+ TYN L+ G CK G+ +A+ + +++ G+N+
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 433
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
N ++ ++I LC +FD AL + +M T+IS L + G++ KA
Sbjct: 434 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 489
Score = 130 bits (327), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 134/278 (48%), Gaps = 35/278 (12%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ + M + GV PNVVT+N+++DG + ++A M + G+ P +++YSI++ GL
Sbjct: 282 LFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLT 341
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTI----------------------------------- 85
+ K + +A +LK+M + PN I
Sbjct: 342 RAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSS 401
Query: 86 TYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKV 145
TYN+LI G CK G+ NA LL EM G + ++ S + LC D + + ++
Sbjct: 402 TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEM 461
Query: 146 IDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLF 205
+ + + P L+ GLCK G+ A E++ KG+ ++ T N +++GLC+ G
Sbjct: 462 LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL 521
Query: 206 DEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
DEA + ++ GC+ D +++ T+IS K + D+A
Sbjct: 522 DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 559
Score = 114 bits (285), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 120/243 (49%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M K+G PNV+ YN+L+D + +NKA + + M G+ +Y+ +I G C
Sbjct: 352 VLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYC 411
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + A LLK+M S N ++ S+I LC +A + EM +R
Sbjct: 412 KNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGG 471
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
+ + LCK K + L + ++KG D T N LL GLC+ G++ +A + +++
Sbjct: 472 LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 531
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+G ++ +YNT+I+G C + DEA + +M G D T+ +I LF +
Sbjct: 532 LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV 591
Query: 241 DKA 243
++A
Sbjct: 592 EEA 594
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 117/240 (48%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
+ +G + T N+L+ G C ++++A + + G D +SY+ +I+G C K
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 555
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++EA L +M + P+ TY+ LI GL KV A + D+ G D+ TY+
Sbjct: 556 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 615
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D CK ++G +++ K +QP+ YN L+ C+ GR+ A E+ +D+ KG
Sbjct: 616 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 675
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ N+ TY ++I G+ +EA L +M G + + +I + G+ K E
Sbjct: 676 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 735
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 112/230 (48%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ + + P +L+ G C + +KA ++ G D + + +++GLC+
Sbjct: 461 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 520
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++EA + K++ + + ++YN+LI G C K+ A+ LDEM RG D TY+
Sbjct: 521 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 580
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ L + V++ I G+ PD+ TY++++DG CK R ++ QE F ++ K
Sbjct: 581 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
N YN +I C+ G AL L M+ G + T+ ++I +
Sbjct: 641 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 114/228 (50%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
+M+ +G+ TYN+L+ GYC + + A+ + M +G + S++ +I LC
Sbjct: 390 LMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL 449
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
M + AL + +M + P +LI GLCK GK S A EL + +G D T N
Sbjct: 450 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 509
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ L LC+ +D+ + K+++ +G D +YN L+ G C ++ +A ++ K+
Sbjct: 510 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 231
G +N+TY+ +I GL +EA+ + NG + D T+ +I
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 617
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 109/215 (50%), Gaps = 7/215 (3%)
Query: 33 AQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVN---EALNLLKQMHSEKIIPNTITYNS 89
A VF + G+FP + +I++ L + EA +++ + + P+ + +
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV----CKGVSPDVYLFTT 265
Query: 90 LIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKG 149
I+ CK GKV A +L +M G +++T+N+ +D L D+ +K++++G
Sbjct: 266 AINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERG 325
Query: 150 IQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEAL 209
++P + TY+IL+ GL + RI DA V +++ KKG+ N YN +I+ + G ++A+
Sbjct: 326 MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAI 385
Query: 210 TLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ M G T+ T+I + G+ D AE
Sbjct: 386 EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAE 420
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
MM + V+PN V YN L+ YC ++ A + M G+ P+ +Y+ +I G+ +
Sbjct: 636 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V EA L ++M E + PN Y +LIDG K G++ LL EMH + + ITY
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDA 173
+ + +V + L+ ++ +KGI PD TY + G K G + +A
Sbjct: 756 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 60/105 (57%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M +G++PNV Y +L+DGY + ++ K + + M V P+ ++Y++MI G +
Sbjct: 706 MRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGN 765
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDE 109
V EA LL +M + I+P++ITY I G K G V A++ DE
Sbjct: 766 VTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 140 bits (354), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 137/266 (51%), Gaps = 35/266 (13%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L++++ G PNVVT+ +L++G+C E+++A +F M Q G+ PD+++YS +I+G
Sbjct: 273 LLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYF 332
Query: 61 KM-------KMVNEALN----------------------------LLKQMHSEKIIPNTI 85
K K+ ++AL+ + K+M + I PN +
Sbjct: 333 KAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVV 392
Query: 86 TYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKV 145
TY LI GLC+ G++ A+ + ++ RG I+TY+S +D CK ++ G AL + +
Sbjct: 393 TYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452
Query: 146 IDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLF 205
I G PD+ Y +L+DGL K G + A + + LN +N++I+G C+ F
Sbjct: 453 IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRF 512
Query: 206 DEALTLMSKMEDNGCIHDPITFETII 231
DEAL + M G D TF T++
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVM 538
Score = 124 bits (310), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 126/235 (53%), Gaps = 1/235 (0%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
++M++G + +V+ N ++ G V+++ A + + + G P+V+++ +ING CK
Sbjct: 242 LVMERGFRVGIVSCNKVLKGLS-VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRG 300
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
++ A +L K M I P+ I Y++LIDG K G + +L + +G D++ ++
Sbjct: 301 EMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFS 360
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
S +D K + + K+++ +GI P++ TY IL+ GLC+ GRI +A ++ + K+
Sbjct: 361 STIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR 420
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
G + TY+++I+G CK G L M G D + + ++ L ++G
Sbjct: 421 GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 122/242 (50%), Gaps = 6/242 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ + + +GVK +VV ++S +D Y ++ A V+ M G+ P+V++Y+I+I GLC
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + EA + Q+ + P+ +TY+SLIDG CK G + + + L ++M G P D++
Sbjct: 403 QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
Y +D L K + + K++ + I+ ++ +N L+DG C+ R +A +VF+ +
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 181 FKKGYNLNNWTYNT------MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
G + T+ T M + CK L L M+ N D +I L
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLL 582
Query: 235 FE 236
F+
Sbjct: 583 FK 584
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 105/180 (58%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
+++ ++P++VTYN+++ GYC + +++A+ +F + P+ ++ +I+I+ LCK
Sbjct: 598 LIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNND 657
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++ A+ + M + PN +TY L+D K+ + +++L +EM +G I++Y+
Sbjct: 658 MDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSI 717
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D LCK VD+ + + ID + PD+ Y IL+ G CK GR+ +A +++ + + G
Sbjct: 718 IIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNG 777
Score = 111 bits (277), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 125/276 (45%), Gaps = 41/276 (14%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSY------SIMING 58
M+ Q ++ NVV +NSL+DG+C +N ++A VF M G+ PDV ++ SIM +
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDA 546
Query: 59 LCKMKMVNEALNLLKQMHSEKII-----------------------------------PN 83
CK L L M KI P+
Sbjct: 547 FCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD 606
Query: 84 TITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIK 143
+TYN++I G C ++ A + + + V + +T + LCK + +D I +
Sbjct: 607 IVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFS 666
Query: 144 KVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEG 203
+ +KG +P+ TY L+D K I+ + ++F+++ +KG + + +Y+ +I+GLCK G
Sbjct: 667 IMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRG 726
Query: 204 LFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
DEA + + D + D + + +I + G
Sbjct: 727 RVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGR 762
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 106/223 (47%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ +M + + ++ N ++ + + A FN + + + PD+++Y+ MI G C
Sbjct: 559 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYC 618
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++ ++EA + + + PNT+T LI LCK + A + M +G + +
Sbjct: 619 SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 678
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY +D K ++ L +++ +KGI P + +Y+I++DGLCK GR+ +A +F
Sbjct: 679 TYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 738
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHD 223
+ Y +I G CK G EA L M NG D
Sbjct: 739 IDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M ++M ++G KPN VTY LMD + ++ + +F M + G+ P ++SYSI+I+GLC
Sbjct: 664 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLC 723
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRG-QPADI 119
K V+EA N+ Q K++P+ + Y LI G CK G++ A L + M G +P D+
Sbjct: 724 KRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 783
Query: 120 I 120
+
Sbjct: 784 L 784
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 102/221 (46%), Gaps = 2/221 (0%)
Query: 20 LMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEK 79
LM+ C V+KA +F TQ+GV S M+N L V+ + ++
Sbjct: 152 LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGG 211
Query: 80 IIPNTITYNSLI-DGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKG 138
I P+ ++ + + D L G+V+ A + + RG I++ N L L ++
Sbjct: 212 IEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSV-DQIEVA 270
Query: 139 IALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMING 198
L+ V+D G P++ T+ L++G CK G + A ++F+ + ++G + Y+T+I+G
Sbjct: 271 SRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDG 330
Query: 199 LCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
K G+ L S+ G D + F + I + G+
Sbjct: 331 YFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 51/86 (59%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M ++G+ P++V+Y+ ++DG C V++A +F+ + PDV++Y+I+I G CK+
Sbjct: 703 MQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGR 762
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSL 90
+ EA L + M + P+ + +L
Sbjct: 763 LVEAALLYEHMLRNGVKPDDLLQRAL 788
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 140 bits (353), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 130/233 (55%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M +G+ PN V YN+++DGYC ++ A+ M + G+ PD L+Y+ +I C
Sbjct: 376 ILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFC 435
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++ + A + +M + + P+ TYN LI G + + +++L EM G +++
Sbjct: 436 ELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVV 495
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
+Y + ++ LCKG + + + + + D+G+ P + YN+L+DG C G+I+DA +++
Sbjct: 496 SYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEM 555
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
KKG LN TYNT+I+GL G EA L+ ++ G D T+ ++IS
Sbjct: 556 LKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISG 608
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 125/240 (52%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M + P+V YN L+DG C +N A+ +F+ M + P +++Y+ +I+G CK
Sbjct: 205 MKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGN 264
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++ + ++M ++ I P+ IT+N+L+ GL K G V +A +L EM G D T++
Sbjct: 265 PEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSI 324
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
D + + + + +D G++ + T +ILL+ LCK G+I+ A+E+ KG
Sbjct: 325 LFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKG 384
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
N YNTMI+G C++G A + ME G D + + +I E GE + AE
Sbjct: 385 LVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAE 444
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 127/235 (54%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
+++ +P+ Y + +++V K +FN M ++P V Y+++I+GLCK K
Sbjct: 170 ILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKR 229
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+N+A L +M + +++P+ ITYN+LIDG CK G ++++ + M +IT+N+
Sbjct: 230 MNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNT 289
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
L L K V+ ++K++ D G PD T++IL DG + + A V++ G
Sbjct: 290 LLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSG 349
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
+N +T + ++N LCKEG ++A ++ + G + + + + T+I KG+
Sbjct: 350 VKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGD 404
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 129/237 (54%)
Query: 2 LAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCK 61
+ M KQG+KP+ + YN L+ +C + E+ A+ N M GV P V +Y+I+I G +
Sbjct: 412 IEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGR 471
Query: 62 MKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 121
++ ++LK+M +PN ++Y +LI+ LCK K+ A + +M RG +
Sbjct: 472 KYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRI 531
Query: 122 YNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF 181
YN +D C ++ K+++ KGI+ ++ TYN L+DGL G++ +A+++ ++
Sbjct: 532 YNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEIS 591
Query: 182 KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
+KG + +TYN++I+G G + L +M+ +G T+ +IS ++G
Sbjct: 592 RKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG 648
Score = 121 bits (303), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 131/265 (49%), Gaps = 35/265 (13%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ + + P+++TYN+L+DGYC K+ V M + P +++++ ++ GL K M
Sbjct: 240 MLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGM 299
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDG------------------------------- 93
V +A N+LK+M +P+ T++ L DG
Sbjct: 300 VEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSI 359
Query: 94 ----LCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKG 149
LCK GK+ A E+L +G + + YN+ +D C+ + I+ + +G
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419
Query: 150 IQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEAL 209
++PD YN L+ C+ G +++A++ + KG + + TYN +I G ++ FD+
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 479
Query: 210 TLMSKMEDNGCIHDPITFETIISAL 234
++ +MEDNG + + +++ T+I+ L
Sbjct: 480 DILKEMEDNGTMPNVVSYGTLINCL 504
Score = 117 bits (294), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 123/244 (50%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ + +G+ P+ + L+D + VF + + P Y I
Sbjct: 131 LFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAV 190
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K+ V + L L +M ++I P+ YN LIDGLCK ++++A +L DEM R +I
Sbjct: 191 KLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLI 250
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN+ +D CK + +K + +++ I+P + T+N LL GL K G ++DA+ V +++
Sbjct: 251 TYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEM 310
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
G+ + +T++ + +G + AL + D+G + T +++AL ++G+
Sbjct: 311 KDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKI 370
Query: 241 DKAE 244
+KAE
Sbjct: 371 EKAE 374
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 106/200 (53%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M +GV P+V TYN L+ GY E +K + M G P+V+SY +IN LCK
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ EA + + M + P YN LIDG C GK+ +A+ EM +G +++TYN+
Sbjct: 510 LLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNT 569
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D L + + L+ ++ KG++PD+ TYN L+ G G ++ +++++ + G
Sbjct: 570 LIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSG 629
Query: 185 YNLNNWTYNTMINGLCKEGL 204
TY+ +I+ KEG+
Sbjct: 630 IKPTLKTYHLLISLCTKEGI 649
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 125/237 (52%)
Query: 8 QGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNE 67
GVK N T + L++ C ++ KA+ + G+ P+ + Y+ MI+G C+ +
Sbjct: 348 SGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVG 407
Query: 68 ALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 127
A ++ M + + P+ + YN LI C+ G++ NA + +++M ++G + TYN +
Sbjct: 408 ARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIG 467
Query: 128 ALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
+ + DK ++K++ D G P++ +Y L++ LCK ++ +AQ V +D+ +G +
Sbjct: 468 GYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSP 527
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
YN +I+G C +G ++A +M G + +T+ T+I L G+ +AE
Sbjct: 528 KVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAE 584
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 124/231 (53%), Gaps = 4/231 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M G PNVV+Y +L++ C +++ +AQ V M GV P V Y+++I+G C
Sbjct: 481 ILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCC 540
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ +A K+M + I N +TYN+LIDGL TGK+S A +LL E+ +G D+
Sbjct: 541 SKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVF 600
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYNS + +V + IAL +++ GI+P + TY++L+ LC I+ + +F ++
Sbjct: 601 TYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEM 659
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 231
K + YN +++ G ++A L +M + D T+ ++I
Sbjct: 660 SLKP---DLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLI 707
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 123/240 (51%), Gaps = 4/240 (1%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+K+G++ N+VTYN+L+DG + ++++A+ + +++ G+ PDV +Y+ +I+G
Sbjct: 555 MLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGN 614
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V + L ++M I P TY+ LI LC + L EM ++ D++ YN
Sbjct: 615 VQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEMSLK---PDLLVYNG 670
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
L ++K L K++I+K I D TYN L+ G K G++ + + + ++ +
Sbjct: 671 VLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNARE 730
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
TYN ++ G C+ + A +M++ G + D ++S L E+ + +AE
Sbjct: 731 MEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAE 790
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 112/224 (50%), Gaps = 10/224 (4%)
Query: 26 LVNE---VNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIP 82
L+NE +++A +F + G++P S +++++ L K K +N+ + P
Sbjct: 118 LLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRP 177
Query: 83 NTITYNSLIDGLCKTGKVSNAWELLDEM-HVRGQPADIITYNSFLDALCKGHHVDKGIAL 141
+ Y I K V EL + M H R P+ + YN +D LCKG ++ L
Sbjct: 178 SKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPS-VFIYNVLIDGLCKGKRMNDAEQL 236
Query: 142 IKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCK 201
+++ + + P + TYN L+DG CK G + + +V + + + T+NT++ GL K
Sbjct: 237 FDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFK 296
Query: 202 EGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK-GENDKAE 244
G+ ++A ++ +M+D G + D TF S LF+ N+KAE
Sbjct: 297 AGMVEDAENVLKEMKDLGFVPDAFTF----SILFDGYSSNEKAE 336
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 105/196 (53%), Gaps = 2/196 (1%)
Query: 50 LSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWEL-LD 108
SY ++ L + KM++EA +L + +E I P++ + L+D L KT + + L+
Sbjct: 110 FSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLN 169
Query: 109 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCG 168
+ +P+ + Y + A K V KG+ L ++ I P + YN+L+DGLCK
Sbjct: 170 ILESDFRPSKFM-YGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGK 228
Query: 169 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFE 228
R+ DA+++F ++ + + TYNT+I+G CK G +++ + +M+ + ITF
Sbjct: 229 RMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFN 288
Query: 229 TIISALFEKGENDKAE 244
T++ LF+ G + AE
Sbjct: 289 TLLKGLFKAGMVEDAE 304
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 124/234 (52%), Gaps = 8/234 (3%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L + ++G+KP+V TYNSL+ GY V + A++ M + G+ P + +Y ++I+ LC
Sbjct: 586 LLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LC 644
Query: 61 KMKMVNEALNLLKQMHSE-KIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADI 119
E + L +++ E + P+ + YN ++ G + A+ L +M + D
Sbjct: 645 ----TKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDK 700
Query: 120 ITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
TYNS + K + + +LI ++ + ++P+ TYNI++ G C+ A +++
Sbjct: 701 TTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYRE 760
Query: 180 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
+ +KG+ L+ N +++GL +E EA ++S+M NG + +T + +SA
Sbjct: 761 MQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM--NGRMLGDVTVDEDLSA 812
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 140 bits (352), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 133/243 (54%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M + G+ P+ V+YN L+ G ++ A A + M + G+ P +Y+ +I+GL
Sbjct: 314 VLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLF 373
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ A L++++ + I+ +++TYN LI+G C+ G A+ L DEM G
Sbjct: 374 MENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQF 433
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY S + LC+ + + L +KV+ KG++PD+ N L+DG C G + A + +++
Sbjct: 434 TYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEM 493
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
N ++ TYN ++ GLC EG F+EA LM +M+ G D I++ T+IS +KG+
Sbjct: 494 DMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDT 553
Query: 241 DKA 243
A
Sbjct: 554 KHA 556
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 134/240 (55%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+KQG+ P TYN+L+ G + N++ A+ + + + G+ D ++Y+I+ING C+
Sbjct: 353 MVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGD 412
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+A L +M ++ I P TY SLI LC+ K A EL +++ +G D++ N+
Sbjct: 413 AKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNT 472
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D C ++D+ +L+K++ I PD TYN L+ GLC G+ ++A+E+ ++ ++G
Sbjct: 473 LMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRG 532
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
++ +YNT+I+G K+G A + +M G +T+ ++ L + E + AE
Sbjct: 533 IKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAE 592
Score = 120 bits (302), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 121/228 (53%)
Query: 7 KQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVN 66
++G+ + VTYN L++GYC + KA A+ + M G+ P +Y+ +I LC+
Sbjct: 390 EKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTR 449
Query: 67 EALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 126
EA L +++ + + P+ + N+L+DG C G + A+ LL EM + D +TYN +
Sbjct: 450 EADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLM 509
Query: 127 DALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 186
LC ++ L+ ++ +GI+PD +YN L+ G K G K A V ++ G+N
Sbjct: 510 RGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFN 569
Query: 187 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
TYN ++ GL K + A L+ +M+ G + + +F ++I A+
Sbjct: 570 PTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAM 617
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 122/240 (50%), Gaps = 3/240 (1%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
+M ++G P T N ++ +N + A + M +M + +V +++IMIN LCK
Sbjct: 180 LMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEG 239
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
+ +A L M I P +TYN+L+ G G++ A ++ EM +G D+ TYN
Sbjct: 240 KLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYN 299
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
L +C + + +K++ G+ PD +YNIL+ G G ++ A ++ K+
Sbjct: 300 PILSWMCNEGRASEVLREMKEI---GLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQ 356
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
G +TYNT+I+GL E + A L+ ++ + G + D +T+ +I+ + G+ KA
Sbjct: 357 GMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKA 416
Score = 110 bits (275), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 123/242 (50%), Gaps = 3/242 (1%)
Query: 3 AVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKM 62
A M + +K NV T+N +++ C ++ KA+ M G+ P +++Y+ ++ G
Sbjct: 214 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLR 273
Query: 63 KMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 122
+ A ++ +M S+ P+ TYN ++ +C G+ S E+L EM G D ++Y
Sbjct: 274 GRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRAS---EVLREMKEIGLVPDSVSY 330
Query: 123 NSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 182
N + ++ A +++ +G+ P TYN L+ GL +I+ A+ + +++ +
Sbjct: 331 NILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIRE 390
Query: 183 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 242
KG L++ TYN +ING C+ G +A L +M +G T+ ++I L K + +
Sbjct: 391 KGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTRE 450
Query: 243 AE 244
A+
Sbjct: 451 AD 452
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 112/232 (48%), Gaps = 3/232 (1%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
+ + ++ L+ C + V++A F M + G +P + + ++ L ++ + A
Sbjct: 154 STILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFY 213
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 132
M+ +I N T+N +I+ LCK GK+ A L M V G I+TYN+ +
Sbjct: 214 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLR 273
Query: 133 HHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 192
++ +I ++ KG QPDM TYN +L +C GR A EV +++ + G ++ +Y
Sbjct: 274 GRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSY 330
Query: 193 NTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
N +I G G + A +M G + T+ T+I LF + + + AE
Sbjct: 331 NILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAE 382
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 3/151 (1%)
Query: 97 TGKVSNAWELLDEM---HVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPD 153
T + ++ L DE+ H R + I ++ + C+ VD+ I + +KG P
Sbjct: 130 TSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPK 189
Query: 154 MCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMS 213
T N +L L + RI++A + D+++ N +T+N MIN LCKEG +A +
Sbjct: 190 TETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLG 249
Query: 214 KMEDNGCIHDPITFETIISALFEKGENDKAE 244
ME G +T+ T++ +G + A
Sbjct: 250 IMEVFGIKPTIVTYNTLVQGFSLRGRIEGAR 280
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 138/243 (56%), Gaps = 6/243 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M+K+GV+PN++TY +++ G C + ++ +A +FN + +G+ D Y +I+G+C
Sbjct: 299 LLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGIC 358
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ +N A ++L M I P+ +TYN++I+GLC G+VS A DE+ +G D+I
Sbjct: 359 RKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA----DEVS-KGVVGDVI 413
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY++ LD+ K ++D + + ++ ++ I D+ NILL G +A +++ +
Sbjct: 414 TYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAM 473
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+ + TY TMI G CK G +EAL + +++ + + + + II AL +KG
Sbjct: 474 PEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSS-VSAAVCYNRIIDALCKKGML 532
Query: 241 DKA 243
D A
Sbjct: 533 DTA 535
Score = 127 bits (320), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 133/228 (58%), Gaps = 1/228 (0%)
Query: 18 NSLMDGYCLVNEVNKAQAVFNTMTQMGVF-PDVLSYSIMINGLCKMKMVNEALNLLKQMH 76
++++ G+C + + A F + GV P++++Y+ +++ LC++ V+E +L++++
Sbjct: 175 SAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLE 234
Query: 77 SEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVD 136
E + + Y++ I G K G + +A EM +G D+++Y+ +D L K +V+
Sbjct: 235 DEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVE 294
Query: 137 KGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMI 196
+ + L+ K+I +G++P++ TY ++ GLCK G++++A +F + G ++ + Y T+I
Sbjct: 295 EALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLI 354
Query: 197 NGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+G+C++G + A +++ ME G +T+ T+I+ L G +A+
Sbjct: 355 DGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEAD 402
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 118/222 (53%), Gaps = 5/222 (2%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNL 71
PN+VTY +L+ C + +V++ + + + G D + YS I+G K + +AL
Sbjct: 205 PNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQ 264
Query: 72 LKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 131
++M + + + ++Y+ LIDGL K G V A LL +M G ++ITY + + LCK
Sbjct: 265 DREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCK 324
Query: 132 GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT 191
+++ L +++ GI+ D Y L+DG+C+ G + A + D+ ++G + T
Sbjct: 325 MGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILT 384
Query: 192 YNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
YNT+INGLC G EA + G + D IT+ T++ +
Sbjct: 385 YNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDS 421
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 110/203 (54%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
+V+ Y +++G C + KA + + GV + ++Y+ +INGLC+ + EAL L
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 132
+ + ++P+ +TY LID LCK G +A +LLD M +G +II YNS +D CK
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKL 773
Query: 133 HHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 192
+ + ++ + + + PD T + ++ G CK G +++A VF + K + + + +
Sbjct: 774 GQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGF 833
Query: 193 NTMINGLCKEGLFDEALTLMSKM 215
+I G C +G +EA L+ +M
Sbjct: 834 LFLIKGFCTKGRMEEARGLLREM 856
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 99/174 (56%)
Query: 8 QGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNE 67
+GV N +TYNSL++G C + +A +F+++ +G+ P ++Y I+I+ LCK + +
Sbjct: 684 RGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLD 743
Query: 68 ALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 127
A LL M S+ ++PN I YNS++DG CK G+ +A ++ + D T +S +
Sbjct: 744 AEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIK 803
Query: 128 ALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF 181
CK +++ +++ + DK I D + L+ G C GR+++A+ + +++
Sbjct: 804 GYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREML 857
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 141/342 (41%), Gaps = 110/342 (32%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
ML M ++G++P+++TYN++++G C+ V++A V GV DV++YS +++
Sbjct: 369 MLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYI 423
Query: 61 KMKMVNEALNLLKQMHSEKI-----------------------------------IPNTI 85
K++ ++ L + ++ KI P+T
Sbjct: 424 KVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTA 483
Query: 86 TYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKV 145
TY ++I G CKTG++ A E+ +E+ + + + YN +DALCK +D ++ ++
Sbjct: 484 TYATMIKGYCKTGQIEEALEMFNELR-KSSVSAAVCYNRIIDALCKKGMLDTATEVLIEL 542
Query: 146 IDKGIQPDMCTYNILLDG-----------------------------------LCKCGRI 170
+KG+ D+ T LL LCK G
Sbjct: 543 WEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSF 602
Query: 171 KDAQEVFQDLFKKGY--------------NLNNW--------------------TYNTMI 196
+ A EV+ + +KG NL + Y +I
Sbjct: 603 EAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIII 662
Query: 197 NGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
NGLCKEG +AL L S + G + IT+ ++I+ L ++G
Sbjct: 663 NGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQG 704
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 85/161 (52%)
Query: 83 NTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALI 142
+ I Y +I+GLCK G + A L RG + ITYNS ++ LC+ + + + L
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 143 KKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKE 202
+ + G+ P TY IL+D LCK G DA+++ + KG N YN++++G CK
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKL 773
Query: 203 GLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
G ++A+ ++S+ D T ++I +KG+ ++A
Sbjct: 774 GQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEA 814
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 24/222 (10%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M+ +G+ PN++ YNS++DGYC + + A V + V PD + S MI G C
Sbjct: 747 LLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYC 806
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEM---------- 110
K + EAL++ + + I + + LI G C G++ A LL EM
Sbjct: 807 KKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLI 866
Query: 111 -HVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQP---DMCTYNILLDGLCK 166
V + A+ + FL LC+ V + I ++ + I I P ++ +Y +
Sbjct: 867 NRVDAELAESESIRGFLVELCEQGRVPQAIKILDE-ISSTIYPSGKNLGSYQ-------R 918
Query: 167 CGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 208
+ D E +++ KK Y + + ++ ++ LC G ++A
Sbjct: 919 LQFLNDVNE--EEIKKKDYVHDFHSLHSTVSSLCTSGKLEQA 958
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 99/217 (45%), Gaps = 12/217 (5%)
Query: 37 FNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCK 96
++ + G P + S + L +++ N L Q+ S++I N Y+ +
Sbjct: 14 LQSLLKSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYSIVSWAFLN 73
Query: 97 TGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHV-----DKGIALIKKVI-DKGI 150
+ +A + ++ +H+ A I LD+L G + KG+ +++ + + G
Sbjct: 74 LNRYEDAEKFIN-IHI--SKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGA 130
Query: 151 QPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG--YNLNNWTYNTMINGLCKEGLFDEA 208
P T+ L+ + G + +A EV + + K Y +N+ + +I+G CK G + A
Sbjct: 131 FPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELA 190
Query: 209 LTLMSKMEDNGC-IHDPITFETIISALFEKGENDKAE 244
L D+G + + +T+ T++SAL + G+ D+
Sbjct: 191 LGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVR 227
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 125/231 (54%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
L M++ G+KPN TY + + GY +E A M + GV P+ + + +IN C
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K V EA + + M + I+ + TY L++GL K KV +A E+ EM +G D+
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
+Y ++ K ++ K ++ +++++G+ P++ YN+LL G C+ G I+ A+E+ ++
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 231
KG + N TY T+I+G CK G EA L +M+ G + D + T++
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739
Score = 134 bits (336), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 126/237 (53%), Gaps = 1/237 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M + GV PN V L++ YC +V +A + + +M G+ D +Y++++NGL K
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V++A + ++M + I P+ +Y LI+G K G + A + DEM G ++I YN
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
L C+ ++K L+ ++ KG+ P+ TY ++DG CK G + +A +F ++ KG
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
+++ Y T+++G C+ + A+T+ GC F +I+ +F+ G+ +
Sbjct: 728 LVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKKGCASSTAPFNALINWVFKFGKTE 783
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 125/240 (52%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ G +PNVV Y +L+ + + A V M + G+ PD+ Y+ +I GL K K
Sbjct: 443 MIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKR 502
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++EA + L +M + PN TY + I G + + ++A + + EM G + +
Sbjct: 503 MDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTG 562
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++ CK V + + + ++D+GI D TY +L++GL K ++ DA+E+F+++ KG
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ ++Y +ING K G +A ++ +M + G + I + ++ GE +KA+
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Score = 124 bits (310), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 136/284 (47%), Gaps = 45/284 (15%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+++G+ PNV+ YN L+ G+C E+ KA+ + + M+ G+ P+ ++Y +I+G CK
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNA--------------------- 103
+ EA L +M + ++P++ Y +L+DG C+ V A
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNAL 772
Query: 104 --W-------ELLDEMHVR---------GQPADIITYNSFLDALCKGHHVDKGIALIKKV 145
W EL E+ R G+P D+ TYN +D LCK +++ L ++
Sbjct: 773 INWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDV-TYNIMIDYLCKEGNLEAAKELFHQM 831
Query: 146 IDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLF 205
+ + P + TY LL+G K GR + VF + G ++ Y+ +IN KEG+
Sbjct: 832 QNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMT 891
Query: 206 DEALTLMSKM-----EDNGCIHDPITFETIISALFEKGENDKAE 244
+AL L+ +M D+GC T ++S + GE + AE
Sbjct: 892 TKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAE 935
Score = 114 bits (284), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 115/240 (47%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ G+ P Y SL++GYC V + + M + + +Y ++ G+C
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGD 432
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++ A N++K+M + PN + Y +LI + + +A +L EM +G DI YNS
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS 492
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ L K +D+ + + ++++ G++P+ TY + G + A + +++ + G
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG 552
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
N +IN CK+G EA + M D G + D T+ +++ LF+ + D AE
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAE 612
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 124/275 (45%), Gaps = 35/275 (12%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ +G+ P TY+ L+DG C + + A+++ M +GV D +YS++I+GL K +
Sbjct: 268 MICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRN 327
Query: 65 VNEALNLLKQMHSEKI-----------------------------------IPNTITYNS 89
+ A L+ +M S I IP Y S
Sbjct: 328 ADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYAS 387
Query: 90 LIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKG 149
LI+G C+ V +ELL EM R TY + + +C +D ++K++I G
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447
Query: 150 IQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEAL 209
+P++ Y L+ + R DA V +++ ++G + + YN++I GL K DEA
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR 507
Query: 210 TLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ + +M +NG + T+ IS E E A+
Sbjct: 508 SFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 119/253 (47%), Gaps = 21/253 (8%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVN-------KAQAVFNTMTQ--------------M 43
M+++ V +V TY+ L+ +C V K + F T T
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICK 271
Query: 44 GVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNA 103
G+ P +Y ++I+GLCK+K + +A +LL +M S + + TY+ LIDGL K A
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 104 WELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDG 163
L+ EM G Y+ + + K ++K AL +I G+ P Y L++G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 164 LCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHD 223
C+ ++ E+ ++ K+ ++ +TY T++ G+C G D A ++ +M +GC +
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 224 PITFETIISALFE 236
+ + T+I +
Sbjct: 452 VVIYTTLIKTFLQ 464
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 110/253 (43%), Gaps = 21/253 (8%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMV------ 65
P + L+D N ++ V+ M + V DV +Y ++I C+ V
Sbjct: 184 PRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDV 243
Query: 66 ---------------NEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEM 110
+ AL L + M + ++P TY+ LIDGLCK ++ +A LL EM
Sbjct: 244 LFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEM 303
Query: 111 HVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRI 170
G D TY+ +D L KG + D L+ +++ GI Y+ + + K G +
Sbjct: 304 DSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVM 363
Query: 171 KDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETI 230
+ A+ +F + G Y ++I G C+E + L+ +M+ + P T+ T+
Sbjct: 364 EKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTV 423
Query: 231 ISALFEKGENDKA 243
+ + G+ D A
Sbjct: 424 VKGMCSSGDLDGA 436
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 108/239 (45%), Gaps = 43/239 (17%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNT-----------------------MT 41
M +G+ P+ Y +L+DG C +N+V +A +F T T
Sbjct: 723 MKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKT 782
Query: 42 QM----------GVF-----PDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTIT 86
++ G F P+ ++Y+IMI+ LCK + A L QM + ++P IT
Sbjct: 783 ELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVIT 842
Query: 87 YNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALI---- 142
Y SL++G K G+ + + + DE G D I Y+ ++A K K + L+
Sbjct: 843 YTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMF 902
Query: 143 -KKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLC 200
K +D G + + T LL G K G ++ A++V +++ + Y ++ T +IN C
Sbjct: 903 AKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 114/230 (49%), Gaps = 14/230 (6%)
Query: 15 VTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQ 74
V + L DGY + +A VF++ + + P + ++++ L + ++ ++ K
Sbjct: 152 VLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKG 211
Query: 75 MHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 134
M ++ + TY+ LI C+ G V ++L + + A + +
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATL--------------N 257
Query: 135 VDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 194
VD + L + +I KG+ P TY++L+DGLCK R++DA+ + ++ G +L+N TY+
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 195 MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+I+GL K D A L+ +M +G P ++ I + ++G +KA+
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAK 367
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 138 bits (348), Expect = 3e-33, Method: Composition-based stats.
Identities = 71/234 (30%), Positives = 131/234 (55%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M + GV+P+ +T+NSL+ A+ +F+ MT + DV SY+ +++ +CK
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++ A +L QM ++I+PN ++Y+++IDG K G+ A L EM G D ++YN+
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
L K ++ + +++++ GI+ D+ TYN LL G K G+ + ++VF ++ ++
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
N TY+T+I+G K GL+ EA+ + + + G D + + +I AL + G
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNG 563
Score = 131 bits (329), Expect = 4e-31, Method: Composition-based stats.
Identities = 70/239 (29%), Positives = 127/239 (53%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M + ++ +V +YN+L+D C +++ A + M + P+V+SYS +I+G K
Sbjct: 365 MTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGR 424
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+EALNL +M I + ++YN+L+ K G+ A ++L EM G D++TYN+
Sbjct: 425 FDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNA 484
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
L K D+ + ++ + + P++ TY+ L+DG K G K+A E+F++ G
Sbjct: 485 LLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAG 544
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ Y+ +I+ LCK GL A++L+ +M G + +T+ +II A D++
Sbjct: 545 LRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRS 603
Score = 120 bits (301), Expect = 9e-28, Method: Composition-based stats.
Identities = 66/237 (27%), Positives = 126/237 (53%), Gaps = 1/237 (0%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM-VNE 67
G V +++L+ Y +A +VFN+M + G+ P++++Y+ +I+ K M +
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQ 322
Query: 68 ALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 127
+M + P+ IT+NSL+ + G A L DEM R D+ +YN+ LD
Sbjct: 323 VAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLD 382
Query: 128 ALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
A+CKG +D ++ ++ K I P++ +Y+ ++DG K GR +A +F ++ G L
Sbjct: 383 AICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIAL 442
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ +YNT+++ K G +EAL ++ +M G D +T+ ++ ++G+ D+ +
Sbjct: 443 DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVK 499
Score = 119 bits (297), Expect = 2e-27, Method: Composition-based stats.
Identities = 65/236 (27%), Positives = 131/236 (55%), Gaps = 4/236 (1%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVN--EVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKM 62
M + G++PN+VTYN+++D C E + F+ M + GV PD ++++ ++ +
Sbjct: 294 MKEYGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRG 352
Query: 63 KMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 122
+ A NL +M + +I + +YN+L+D +CK G++ A+E+L +M V+ ++++Y
Sbjct: 353 GLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSY 412
Query: 123 NSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 182
++ +D K D+ + L ++ GI D +YN LL K GR ++A ++ +++
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472
Query: 183 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
G + TYN ++ G K+G +DE + ++M+ + + +T+ T+I + KG
Sbjct: 473 VGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDG-YSKG 527
Score = 113 bits (282), Expect = 1e-25, Method: Composition-based stats.
Identities = 58/208 (27%), Positives = 115/208 (55%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+LA M + + PNVV+Y++++DG+ ++A +F M +G+ D +SY+ +++
Sbjct: 396 ILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYT 455
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K+ EAL++L++M S I + +TYN+L+ G K GK ++ EM +++
Sbjct: 456 KVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLL 515
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY++ +D KG + + + ++ G++ D+ Y+ L+D LCK G + A + ++
Sbjct: 516 TYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEM 575
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEA 208
K+G + N TYN++I+ + D +
Sbjct: 576 TKEGISPNVVTYNSIIDAFGRSATMDRS 603
Score = 107 bits (267), Expect = 7e-24, Method: Composition-based stats.
Identities = 65/216 (30%), Positives = 112/216 (51%), Gaps = 1/216 (0%)
Query: 29 EVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYN 88
+V A+ +F T G V ++S +I+ + + EA+++ M + PN +TYN
Sbjct: 248 KVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYN 307
Query: 89 SLIDGLCKTG-KVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVID 147
++ID K G + + DEM G D IT+NS L +G + L ++ +
Sbjct: 308 AVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTN 367
Query: 148 KGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDE 207
+ I+ D+ +YN LLD +CK G++ A E+ + K N +Y+T+I+G K G FDE
Sbjct: 368 RRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDE 427
Query: 208 ALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
AL L +M G D +++ T++S + G +++A
Sbjct: 428 ALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEA 463
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 120/222 (54%), Gaps = 1/222 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
+++ G P+ TY S + G+C EV+ A VF MTQ G + +SY+ +I GL + K
Sbjct: 181 LIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKK 240
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++EAL+LL +M + PN TY LID LC +G+ S A L +M G D Y
Sbjct: 241 IDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTV 300
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ + C G +D+ L++ +++ G+ P++ TYN L+ G CK + A + + ++
Sbjct: 301 LIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQN 359
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPIT 226
+ TYNT+I G C G D A L+S ME++G + + T
Sbjct: 360 LVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 134 bits (338), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 125/239 (52%), Gaps = 1/239 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ V P++ T+N+L++GYC + V +A+ + Q G PD +Y+ I G C+ K
Sbjct: 146 MLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKE 205
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V+ A + K+M N ++Y LI GL + K+ A LL +M ++ TY
Sbjct: 206 VDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTV 265
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+DALC + + L K++ + GI+PD C Y +L+ C + +A + + + + G
Sbjct: 266 LIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENG 325
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
N TYN +I G CK+ + +A+ L+SKM + + D IT+ T+I+ G D A
Sbjct: 326 LMPNVITYNALIKGFCKKNV-HKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSA 383
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 111/221 (50%)
Query: 17 YNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMH 76
YN+L+ V + + ++ M + V PD+ +++ ++NG CK+ V EA + +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 77 SEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVD 136
P+ TY S I G C+ +V A+++ EM G + ++Y + L + +D
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 137 KGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMI 196
+ ++L+ K+ D P++ TY +L+D LC G+ +A +F+ + + G ++ Y +I
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 197 NGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK 237
C DEA L+ M +NG + + IT+ +I +K
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKK 343
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 81/156 (51%), Gaps = 1/156 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M PNV TY L+D C + ++A +F M++ G+ PD Y+++I C
Sbjct: 247 LLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFC 306
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++EA LL+ M ++PN ITYN+LI G CK V A LL +M + D+I
Sbjct: 307 SGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLI 365
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCT 156
TYN+ + C ++D L+ + + G+ P+ T
Sbjct: 366 TYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 137 bits (344), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 127/240 (52%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ GVK V + +++G C EV K++ + + G+ P+ +Y+ +IN K +
Sbjct: 215 MVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRD 274
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ +LK M + ++ N +TY L++ K GK+S+A +L DEM RG +D+ Y S
Sbjct: 275 FSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTS 334
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ C+ ++ + L ++ +KG+ P TY L+DG+CK G + A+ + ++ KG
Sbjct: 335 LISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKG 394
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
N+ +NT+I+G C++G+ DEA + ME G D T TI S D+A+
Sbjct: 395 VNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAK 454
Score = 134 bits (336), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 141/274 (51%), Gaps = 35/274 (12%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M ++G++ +V Y SL+ C + +A +F+ +T+ G+ P +Y +I+G+CK+
Sbjct: 320 MRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGE 379
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT--- 121
+ A L+ +M S+ + + +N+LIDG C+ G V A + D M +G AD+ T
Sbjct: 380 MGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNT 439
Query: 122 --------------------------------YNSFLDALCKGHHVDKGIALIKKVIDKG 149
Y + +D CK +V++ L ++ KG
Sbjct: 440 IASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKG 499
Query: 150 IQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEAL 209
+QP+ TYN+++ CK G+IK+A+++ ++ G + +++TY ++I+G C DEA+
Sbjct: 500 VQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAM 559
Query: 210 TLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
L S+M G + +T+ +IS L + G++D+A
Sbjct: 560 RLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEA 593
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 117/230 (50%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M +GV V +N+L+DGYC V++A +++ M Q G DV + + + + ++K
Sbjct: 390 MQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKR 449
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+EA L +M + +T++Y +LID CK G V A L EM +G + ITYN
Sbjct: 450 YDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNV 509
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ A CK + + L + G+ PD TY L+ G C + +A +F ++ KG
Sbjct: 510 MIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKG 569
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
+ N+ TY MI+GL K G DEA L +M+ G D + +I ++
Sbjct: 570 LDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 121 bits (303), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 127/266 (47%), Gaps = 35/266 (13%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L VM K GV N VTY LM+ +++ A+ +F+ M + G+ DV Y+ +I+ C
Sbjct: 281 VLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNC 340
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + A L ++ + + P++ TY +LIDG+CK G++ A L++EM +G +
Sbjct: 341 RKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQV 400
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCT------------------------ 156
+N+ +D C+ VD+ + + KG Q D+ T
Sbjct: 401 VFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRM 460
Query: 157 -----------YNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLF 205
Y L+D CK G +++A+ +F ++ KG N TYN MI CK+G
Sbjct: 461 MEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKI 520
Query: 206 DEALTLMSKMEDNGCIHDPITFETII 231
EA L + ME NG D T+ ++I
Sbjct: 521 KEARKLRANMEANGMDPDSYTYTSLI 546
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 110/244 (45%), Gaps = 37/244 (15%)
Query: 36 VFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLC 95
VF+ M + G+ D S + + K + ++ L + ++M + + +++GLC
Sbjct: 176 VFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLC 235
Query: 96 KTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVI--------- 146
+ G+V + +L+ E V+G + TYN+ ++A K G+ + KV+
Sbjct: 236 RRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFS-GVEGVLKVMKKDGVVYNK 294
Query: 147 ---------------------------DKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
++GI+ D+ Y L+ C+ G +K A +F +
Sbjct: 295 VTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDE 354
Query: 180 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
L +KG + +++TY +I+G+CK G A LM++M+ G + F T+I KG
Sbjct: 355 LTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGM 414
Query: 240 NDKA 243
D+A
Sbjct: 415 VDEA 418
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 75/147 (51%)
Query: 98 GKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTY 157
G + D M +G D + FL A K +D + + ++++D G++ + +
Sbjct: 168 GMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSL 227
Query: 158 NILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMED 217
I+++GLC+ G ++ ++++ ++ KG +TYNT+IN K+ F ++ M+
Sbjct: 228 TIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKK 287
Query: 218 NGCIHDPITFETIISALFEKGENDKAE 244
+G +++ +T+ ++ + G+ AE
Sbjct: 288 DGVVYNKVTYTLLMELSVKNGKMSDAE 314
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ A M G+ P+ TY SL+ G C+ + V++A +F+ M G+ + ++Y++MI+GL
Sbjct: 526 LRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLS 585
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGL 94
K +EA L +M + + Y +LI +
Sbjct: 586 KAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 140/274 (51%), Gaps = 36/274 (13%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L+ M +G+ PNVV+YN++M G+C ++ A+ VF+ + + G+ P+ +YSI+I+G
Sbjct: 465 LLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCF 524
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELL------------- 107
+ AL ++ M S I N + Y ++I+GLCK G+ S A ELL
Sbjct: 525 RNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSC 584
Query: 108 -----------------------DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKK 144
+EM G ++ITY S ++ LCK + +D+ + + +
Sbjct: 585 MSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDE 644
Query: 145 VIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGL 204
+ +KG++ D+ Y L+DG CK ++ A +F +L ++G N + YN++I+G G
Sbjct: 645 MKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGN 704
Query: 205 FDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
AL L KM +G D T+ T+I L + G
Sbjct: 705 MVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDG 738
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M G+ PNV+TY SLM+G C N +++A + + M GV D+ +Y +I+G CK
Sbjct: 610 MCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSN 669
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ A L ++ E + P+ YNSLI G G + A +L +M G D+ TY +
Sbjct: 670 MESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTT 729
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D L K ++ L ++ G+ PD Y ++++GL K G+ ++F+++ K
Sbjct: 730 LIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNN 789
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
N YN +I G +EG DEA L +M D G + D TF+ ++S
Sbjct: 790 VTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 124 bits (310), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 127/241 (52%), Gaps = 4/241 (1%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M K+G PN VT++ L++ + E+ KA + M +G+ P V +I G K +
Sbjct: 365 MEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQK 424
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
EAL L + E + N N+++ LCK GK A ELL +M RG ++++YN+
Sbjct: 425 HEEALKLFDESF-ETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNN 483
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ C+ ++D + +++KG++P+ TY+IL+DG + ++A EV +
Sbjct: 484 VMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSN 543
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKM--EDNGCIHDPITFETIISALFEKGENDK 242
+N Y T+INGLCK G +A L++ M E C+ +++ +II F++GE D
Sbjct: 544 IEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCV-SCMSYNSIIDGFFKEGEMDS 602
Query: 243 A 243
A
Sbjct: 603 A 603
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 124/229 (54%)
Query: 15 VTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQ 74
++YNS++DG+ E++ A A + M G+ P+V++Y+ ++NGLCK +++AL + +
Sbjct: 585 MSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDE 644
Query: 75 MHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 134
M ++ + + Y +LIDG CK + +A L E+ G YNS + +
Sbjct: 645 MKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGN 704
Query: 135 VDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 194
+ + L KK++ G++ D+ TY L+DGL K G + A E++ ++ G + Y
Sbjct: 705 MVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTV 764
Query: 195 MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
++NGL K+G F + + + +M+ N + + + +I+ + +G D+A
Sbjct: 765 IVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEA 813
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 120/244 (49%), Gaps = 2/244 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ + M+ GV + VT LM + +A V + + G PD L YS+ + C
Sbjct: 220 LYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACC 279
Query: 61 KMKMVNEALNLLKQMHSEKI-IPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADI 119
K + A +LL++M +K+ +P+ TY S+I K G + +A L DEM G ++
Sbjct: 280 KTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNV 339
Query: 120 ITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
+ S + CK + + + L K+ +G P+ T+++L++ K G ++ A E ++
Sbjct: 340 VAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKK 399
Query: 180 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
+ G + + +T+I G K +EAL L + + G + + TI+S L ++G+
Sbjct: 400 MEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG-LANVFVCNTILSWLCKQGK 458
Query: 240 NDKA 243
D+A
Sbjct: 459 TDEA 462
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 91/163 (55%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ + ++++G+ P+ YNSL+ G+ + + A ++ M + G+ D+ +Y+ +I+GL
Sbjct: 676 LFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLL 735
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + A L +M + ++P+ I Y +++GL K G+ ++ +EM +++
Sbjct: 736 KDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVL 795
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDG 163
YN+ + + ++D+ L +++DKGI PD T++IL+ G
Sbjct: 796 IYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 111/241 (46%), Gaps = 3/241 (1%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ V P N + N + +A+ +++ M +GV D ++ +++ + +
Sbjct: 189 MLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEK 248
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRG--QPADIITY 122
EAL +L + P+++ Y+ + CKT ++ A LL EM + P+ TY
Sbjct: 249 PAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQ-ETY 307
Query: 123 NSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 182
S + A K ++D I L +++ GI ++ L+ G CK + A +F + K
Sbjct: 308 TSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEK 367
Query: 183 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 242
+G + N+ T++ +I K G ++AL KME G TII + ++++
Sbjct: 368 EGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEE 427
Query: 243 A 243
A
Sbjct: 428 A 428
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 90/229 (39%), Gaps = 36/229 (15%)
Query: 51 SYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEM 110
+++ ++N K + + A++++ QM +IP N + L + ++ A EL M
Sbjct: 165 AFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRM 224
Query: 111 HVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKC--- 167
G D +T + A + + + ++ + I++G +PD Y++ + CK
Sbjct: 225 VAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDL 284
Query: 168 ---------------------------------GRIKDAQEVFQDLFKKGYNLNNWTYNT 194
G + DA + ++ G ++N +
Sbjct: 285 AMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATS 344
Query: 195 MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+I G CK AL L KME G + +TF +I + GE +KA
Sbjct: 345 LITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKA 393
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 135 bits (339), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 127/234 (54%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L +M ++GV NVVTY SL+ GYC + +A+ VF + + + D Y ++++G C
Sbjct: 283 VLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYC 342
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + +A+ + M + NT NSLI+G CK+G++ A ++ M+ D
Sbjct: 343 RTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHH 402
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN+ +D C+ +VD+ + L ++ K + P + TYNILL G + G D +++ +
Sbjct: 403 TYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMM 462
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
K+G N + + +T++ L K G F+EA+ L + G + D IT +IS L
Sbjct: 463 LKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGL 516
Score = 134 bits (338), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 131/235 (55%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G++ NVVTYNSL++GY ++ +V V M++ GV +V++Y+ +I G CK ++ EA
Sbjct: 256 GLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEA 315
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
++ + + +K++ + Y L+DG C+TG++ +A + D M G + NS ++
Sbjct: 316 EHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLING 375
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
CK + + + ++ D ++PD TYN L+DG C+ G + +A ++ + +K
Sbjct: 376 YCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPT 435
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
TYN ++ G + G F + L+L M G D I+ T++ ALF+ G+ ++A
Sbjct: 436 VMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEA 490
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 123/232 (53%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ GV+ N NSL++GYC ++ +A+ +F+ M + PD +Y+ +++G C+
Sbjct: 357 MIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGY 416
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V+EAL L QM ++++P +TYN L+ G + G + L M RG AD I+ ++
Sbjct: 417 VDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCST 476
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
L+AL K ++ + L + V+ +G+ D T N+++ GLCK ++ +A+E+ ++
Sbjct: 477 LLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFR 536
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFE 236
TY + +G K G EA + ME G + T+IS F+
Sbjct: 537 CKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFK 588
Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 108/212 (50%), Gaps = 1/212 (0%)
Query: 33 AQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIP-NTITYNSLI 91
A V++ M V PDV + SI++N C+ V++A+ K+ S + N +TYNSLI
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLI 268
Query: 92 DGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQ 151
+G G V +L M RG +++TY S + CK +++ + + + +K +
Sbjct: 269 NGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLV 328
Query: 152 PDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTL 211
D Y +L+DG C+ G+I+DA V ++ + G N N++ING CK G EA +
Sbjct: 329 ADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQI 388
Query: 212 MSKMEDNGCIHDPITFETIISALFEKGENDKA 243
S+M D D T+ T++ G D+A
Sbjct: 389 FSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEA 420
Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 122/258 (47%), Gaps = 41/258 (15%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
+ +G+ P V TY +L+ G+C + ++KA A M + G+ +V S + N L ++
Sbjct: 602 LRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDK 661
Query: 65 VNEALNLLKQ-------------------------MHSEKI-------------IPNTIT 86
++EA LL++ + ++KI +PN I
Sbjct: 662 IDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIV 721
Query: 87 YNSLIDGLCKTGKVSNAWELLDEM--HVRGQPADIITYNSFLDALCKGHHVDKGIALIKK 144
YN I GLCK GK+ +A +L ++ R P D TY + ++K L +
Sbjct: 722 YNVAIAGLCKAGKLEDARKLFSDLLSSDRFIP-DEYTYTILIHGCAIAGDINKAFTLRDE 780
Query: 145 VIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGL 204
+ KGI P++ TYN L+ GLCK G + AQ + L +KG N TYNT+I+GL K G
Sbjct: 781 MALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGN 840
Query: 205 FDEALTLMSKMEDNGCIH 222
EA+ L KM + G +
Sbjct: 841 VAEAMRLKEKMIEKGLVR 858
Score = 111 bits (277), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 129/273 (47%), Gaps = 39/273 (14%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALN 70
KP V TY +L GY V + +A AV M + G+FP + Y+ +I+G K + +N+ +
Sbjct: 538 KPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVAD 597
Query: 71 LLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 130
L+ ++ + + P TY +LI G C G + A+ EM +G ++ + ++L
Sbjct: 598 LVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLF 657
Query: 131 KGHHVDKGIALIKKVID--------------------------------------KGIQP 152
+ +D+ L++K++D K + P
Sbjct: 658 RLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVP 717
Query: 153 DMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL-NNWTYNTMINGLCKEGLFDEALTL 211
+ YN+ + GLCK G+++DA+++F DL + + +TY +I+G G ++A TL
Sbjct: 718 NNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTL 777
Query: 212 MSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+M G I + +T+ +I L + G D+A+
Sbjct: 778 RDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQ 810
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 113/222 (50%)
Query: 17 YNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMH 76
Y LMDGYC ++ A V + M ++GV + + +ING CK + EA + +M+
Sbjct: 334 YGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMN 393
Query: 77 SEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVD 136
+ P+ TYN+L+DG C+ G V A +L D+M + ++TYN L +
Sbjct: 394 DWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFH 453
Query: 137 KGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMI 196
++L K ++ +G+ D + + LL+ L K G +A ++++++ +G + T N MI
Sbjct: 454 DVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMI 513
Query: 197 NGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
+GLCK +EA ++ + C T++ + ++ G
Sbjct: 514 SGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVG 555
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 119/236 (50%), Gaps = 3/236 (1%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVF--NTMTQMGVFPDVLSYSIMINGLCKM 62
M+ V P+V T + +++ YC V+KA VF T + +G+ +V++Y+ +ING +
Sbjct: 216 MISFEVSPDVFTCSIVVNAYCRSGNVDKAM-VFAKETESSLGLELNVVTYNSLINGYAMI 274
Query: 63 KMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 122
V +L+ M + N +TY SLI G CK G + A + + + + AD Y
Sbjct: 275 GDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMY 334
Query: 123 NSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 182
+D C+ + + + +I+ G++ + N L++G CK G++ +A+++F +
Sbjct: 335 GVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMND 394
Query: 183 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
++ TYNT+++G C+ G DEAL L +M + +T+ ++ G
Sbjct: 395 WSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIG 450
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 122/243 (50%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ + M +KP+ TYN+L+DGYC V++A + + M Q V P V++Y+I++ G
Sbjct: 388 IFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYS 447
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++ ++ L+L K M + + I+ ++L++ L K G + A +L + + RG D I
Sbjct: 448 RIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTI 507
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
T N + LCK V++ ++ V +P + TY L G K G +K+A V + +
Sbjct: 508 TLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYM 567
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+KG YNT+I+G K ++ L+ ++ G T+ +I+ G
Sbjct: 568 ERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMI 627
Query: 241 DKA 243
DKA
Sbjct: 628 DKA 630
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 123/240 (51%), Gaps = 2/240 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M ++ V P V+TYN L+ GY + + +++ M + GV D +S S ++ L K+
Sbjct: 427 MCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGD 486
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHV-RGQPADIITYN 123
NEA+ L + + + ++ +TIT N +I GLCK KV+ A E+LD +++ R +PA + TY
Sbjct: 487 FNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPA-VQTYQ 545
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ K ++ + A+ + + KGI P + YN L+ G K + ++ +L +
Sbjct: 546 ALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRAR 605
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
G TY +I G C G+ D+A +M + G + I ++LF + D+A
Sbjct: 606 GLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEA 665
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 112/214 (52%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
+M+K+GV + ++ ++L++ + + N+A ++ + G+ D ++ ++MI+GLCKM+
Sbjct: 461 MMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKME 520
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
VNEA +L ++ + P TY +L G K G + A+ + + M +G I YN
Sbjct: 521 KVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYN 580
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ + K H++K L+ ++ +G+ P + TY L+ G C G I A ++ +K
Sbjct: 581 TLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEK 640
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMED 217
G LN + + N L + DEA L+ K+ D
Sbjct: 641 GITLNVNICSKIANSLFRLDKIDEACLLLQKIVD 674
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 65/120 (54%), Gaps = 10/120 (8%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M +G+ PN+VTYN+L+ G C + V++AQ + + + Q G+ P+ ++Y+ +I+GL K
Sbjct: 781 MALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGN 840
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V EA+ L EK+I L+ G K G V E++ + V+ +I NS
Sbjct: 841 VAEAMRL-----KEKMIE-----KGLVRGSDKQGDVDIPKEVVLDPEVKLGSTGVIEMNS 890
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 134 bits (337), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 139/273 (50%), Gaps = 36/273 (13%)
Query: 2 LAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCK 61
L +M ++G++PNVV YN++M +C + ++ A+++F+ M + G+ P+ +YSI+I+G K
Sbjct: 472 LKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFK 531
Query: 62 MKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLD------------- 108
K A +++ QM++ N + YN++I+GLCK G+ S A E+L
Sbjct: 532 NKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCT 591
Query: 109 -----------------------EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKV 145
EM G+ +++T+ S ++ CK + +D + + ++
Sbjct: 592 SYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEM 651
Query: 146 IDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLF 205
++ D+ Y L+DG CK +K A +F +L + G N YN++I+G G
Sbjct: 652 KSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKM 711
Query: 206 DEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
D A+ L KM ++G D T+ T+I L + G
Sbjct: 712 DAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDG 744
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 125/233 (53%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M + G PNVVT+ SL++G+C N ++ A + + M M + D+ +Y +I+G CK
Sbjct: 616 MSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKND 675
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ A L ++ ++PN YNSLI G GK+ A +L +M G D+ TY +
Sbjct: 676 MKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTT 735
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D L K +++ L +++D GI PD + +L++GL K G+ A ++ +++ KK
Sbjct: 736 MIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKD 795
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK 237
N Y+T+I G +EG +EA L +M + G +HD F ++S EK
Sbjct: 796 VTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRVEK 848
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 123/228 (53%)
Query: 16 TYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQM 75
+YNS++DG+ V + + A + M++ G P+V++++ +ING CK ++ AL + +M
Sbjct: 592 SYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEM 651
Query: 76 HSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHV 135
S ++ + Y +LIDG CK + A+ L E+ G ++ YNS + +
Sbjct: 652 KSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKM 711
Query: 136 DKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTM 195
D I L KK+++ GI D+ TY ++DGL K G I A +++ +L G + + +
Sbjct: 712 DAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVL 771
Query: 196 INGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+NGL K+G F +A ++ +M+ + + + T+I+ +G ++A
Sbjct: 772 VNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEA 819
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 144/309 (46%), Gaps = 70/309 (22%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ G+ +V+ SL++GYC NE+ KA +FN M + G+ PD + +S+M+ CK
Sbjct: 336 MVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNME 395
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDG------------------------------- 93
+ +A+ +M S +I P+++ +++I G
Sbjct: 396 MEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKI 455
Query: 94 ---LCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGI 150
CK GKV A L M +G +++ YN+ + A C+ ++D ++ ++++KG+
Sbjct: 456 FLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGL 515
Query: 151 QPDMCTYNILLD-----------------------------------GLCKCGRIKDAQE 175
+P+ TY+IL+D GLCK G+ A+E
Sbjct: 516 EPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKE 575
Query: 176 VFQDLFK-KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
+ Q+L K K Y+++ +YN++I+G K G D A+ +M +NG + +TF ++I+
Sbjct: 576 MLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGF 635
Query: 235 FEKGENDKA 243
+ D A
Sbjct: 636 CKSNRMDLA 644
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 103/215 (47%), Gaps = 1/215 (0%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
GV + VT LM + +A +F + G PD L +S+ + CK + A
Sbjct: 234 GVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMA 293
Query: 69 LNLLKQMHSEKIIPNTI-TYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 127
L+LL++M + +P + TY S+I K G + A ++DEM G P +I S ++
Sbjct: 294 LDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVN 353
Query: 128 ALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
CKG+ + K + L ++ ++G+ PD ++++++ CK ++ A E + +
Sbjct: 354 GYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAP 413
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIH 222
++ +TMI G K + AL + + ++ H
Sbjct: 414 SSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAH 448
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 117/243 (48%), Gaps = 2/243 (0%)
Query: 2 LAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCK 61
+M+ + V P V N+++ N +++A+ ++N M +GV D ++ +++ +
Sbjct: 192 FGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLR 251
Query: 62 MKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVR-GQPADII 120
+ EA+ + +++ S P+ + ++ + CKT + A +LL EM + G PA
Sbjct: 252 ERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQE 311
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY S + A K ++++ + ++ +++ GI + L++G CK + A ++F +
Sbjct: 312 TYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRM 371
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
++G + ++ M+ CK ++A+ +M+ + T+I K E+
Sbjct: 372 EEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCL-KAES 430
Query: 241 DKA 243
+A
Sbjct: 431 PEA 433
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/194 (20%), Positives = 95/194 (48%), Gaps = 1/194 (0%)
Query: 51 SYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEM 110
+++ ++N + K ++ A++ M K++P N+++ L ++ + A E+ ++M
Sbjct: 171 AFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKM 230
Query: 111 HVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRI 170
+ G D +T + A + ++ + + ++V+ +G +PD +++ + CK +
Sbjct: 231 VLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDL 290
Query: 171 KDAQEVFQDLFKK-GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFET 229
A ++ +++ K G + TY ++I KEG +EA+ +M +M G I +
Sbjct: 291 VMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATS 350
Query: 230 IISALFEKGENDKA 243
+++ + E KA
Sbjct: 351 LVNGYCKGNELGKA 364
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 134 bits (337), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 122/239 (51%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ G +P V TYN ++D C +V A+ +F M G+ PD ++Y+ MI+G K+
Sbjct: 253 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 312
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+++ + ++M P+ ITYN+LI+ CK GK+ E EM G ++++Y++
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 372
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+DA CK + + I + G+ P+ TY L+D CK G + DA + ++ + G
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 432
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
N TY +I+GLC EA L KM+ G I + ++ +I + D+A
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRA 491
Score = 134 bits (336), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 123/230 (53%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M +G+ P+ VTYNS++DG+ V ++ F M M PDV++Y+ +IN CK
Sbjct: 288 MKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK 347
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ L ++M + PN ++Y++L+D CK G + A + +M G + TY S
Sbjct: 348 LPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTS 407
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+DA CK ++ L +++ G++ ++ TY L+DGLC R+K+A+E+F + G
Sbjct: 408 LIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAG 467
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
N +YN +I+G K D AL L+++++ G D + + T I L
Sbjct: 468 VIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGL 517
Score = 132 bits (331), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 123/228 (53%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALN 70
+P+V+TYN+L++ +C ++ + M G+ P+V+SYS +++ CK M+ +A+
Sbjct: 329 EPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIK 388
Query: 71 LLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 130
M ++PN TY SLID CK G +S+A+ L +EM G +++TY + +D LC
Sbjct: 389 FYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLC 448
Query: 131 KGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 190
+ + L K+ G+ P++ +YN L+ G K + A E+ +L +G +
Sbjct: 449 DAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLL 508
Query: 191 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
Y T I GLC + A +M++M++ G + + + T++ A F+ G
Sbjct: 509 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSG 556
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 126/240 (52%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M + V P + N L+ + + + + + F M G P V +Y+IMI+ +CK
Sbjct: 218 MKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGD 277
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V A L ++M ++P+T+TYNS+IDG K G++ + +EM D+ITYN+
Sbjct: 278 VEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNA 337
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++ CK + G+ +++ G++P++ +Y+ L+D CK G ++ A + + D+ + G
Sbjct: 338 LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 397
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
N +TY ++I+ CK G +A L ++M G + +T+ +I L + +AE
Sbjct: 398 LVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAE 457
Score = 124 bits (310), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 126/230 (54%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M G+KPNVV+Y++L+D +C + +A + M ++G+ P+ +Y+ +I+ CK+
Sbjct: 358 MKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGN 417
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+++A L +M + N +TY +LIDGLC ++ A EL +M G ++ +YN+
Sbjct: 418 LSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNA 477
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ K ++D+ + L+ ++ +GI+PD+ Y + GLC +I+ A+ V ++ + G
Sbjct: 478 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 537
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
N+ Y T+++ K G E L L+ +M++ +TF +I L
Sbjct: 538 IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGL 587
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 131/270 (48%), Gaps = 36/270 (13%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M + G+ PN TY SL+D C + ++ A + N M Q+GV +V++Y+ +I+GLC +
Sbjct: 393 MRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAER 452
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ EA L +M + +IPN +YN+LI G K + A ELL+E+ RG D++ Y +
Sbjct: 453 MKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGT 512
Query: 125 FLDALCKGHHVD-----------------------------------KGIALIKKVIDKG 149
F+ LC ++ +G+ L+ ++ +
Sbjct: 513 FIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELD 572
Query: 150 IQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK-GYNLNNWTYNTMINGLCKEGLFDEA 208
I+ + T+ +L+DGLCK + A + F + G N + MI+GLCK+ + A
Sbjct: 573 IEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAA 632
Query: 209 LTLMSKMEDNGCIHDPITFETIISALFEKG 238
TL +M G + D + +++ F++G
Sbjct: 633 TTLFEQMVQKGLVPDRTAYTSLMDGNFKQG 662
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 109/222 (49%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNL 71
P +++L + + +A F+ M + VFP S + +++ K+ ++
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 72 LKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 131
K M P TYN +ID +CK G V A L +EM RG D +TYNS +D K
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 132 GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT 191
+D + +++ D +PD+ TYN L++ CK G++ E ++++ G N +
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 192 YNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
Y+T+++ CKEG+ +A+ M G + + T+ ++I A
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDA 411
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 120/237 (50%), Gaps = 1/237 (0%)
Query: 8 QGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNE 67
+G+KP+++ Y + + G C + ++ A+ V N M + G+ + L Y+ +++ K E
Sbjct: 501 RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 560
Query: 68 ALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEM-HVRGQPADIITYNSFL 126
L+LL +M I +T+ LIDGLCK VS A + + + + G A+ + + +
Sbjct: 561 GLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMI 620
Query: 127 DALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 186
D LCK + V+ L ++++ KG+ PD Y L+DG K G + +A + + + G
Sbjct: 621 DGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMK 680
Query: 187 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
L+ Y +++ GL +A + + +M G D + +++ +E G D+A
Sbjct: 681 LDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEA 737
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 82/154 (53%), Gaps = 1/154 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMT-QMGVFPDVLSYSIMINGL 59
+L M + ++ VVT+ L+DG C V+KA FN ++ G+ + ++ MI+GL
Sbjct: 564 LLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGL 623
Query: 60 CKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADI 119
CK V A L +QM + ++P+ Y SL+DG K G V A L D+M G D+
Sbjct: 624 CKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDL 683
Query: 120 ITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPD 153
+ Y S + L + + K + ++++I +GI PD
Sbjct: 684 LAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 102/255 (40%), Gaps = 50/255 (19%)
Query: 39 TMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQ------------------------ 74
+MT+ G V SY I+ + L +M +A ++LK+
Sbjct: 132 SMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPG 191
Query: 75 --------------------------MHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLD 108
M ++ P T + N L+ K GK +
Sbjct: 192 FGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFK 251
Query: 109 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCG 168
+M G + TYN +D +CK V+ L +++ +G+ PD TYN ++DG K G
Sbjct: 252 DMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVG 311
Query: 169 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFE 228
R+ D F+++ + TYN +IN CK G L +M+ NG + +++
Sbjct: 312 RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYS 371
Query: 229 TIISALFEKGENDKA 243
T++ A ++G +A
Sbjct: 372 TLVDAFCKEGMMQQA 386
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 130/240 (54%), Gaps = 1/240 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M + GV PN+VTYNS + G+ + +A +F + V + ++Y+ +I+G C+M
Sbjct: 264 MERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD-DVTANHVTYTTLIDGYCRMND 322
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++EAL L + M S P +TYNS++ LC+ G++ A LL EM + D IT N+
Sbjct: 323 IDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNT 382
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++A CK + + + KK+I+ G++ DM +Y L+ G CK +++A+E + +KG
Sbjct: 383 LINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKG 442
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
++ TY+ +++G + DE L+ + E G D + +I + + + D A+
Sbjct: 443 FSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAK 502
Score = 130 bits (328), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 123/227 (54%), Gaps = 1/227 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+K GV N+ YN L+ + KA+ + + M + GVFPD+ +Y+ +I+ CK M
Sbjct: 194 MVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSM 253
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
EAL++ +M + PN +TYNS I G + G++ A L E+ A+ +TY +
Sbjct: 254 HFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIK-DDVTANHVTYTT 312
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D C+ + +D+ + L + + +G P + TYN +L LC+ GRI++A + ++ K
Sbjct: 313 LIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKK 372
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 231
+N T NT+IN CK A+ + KM ++G D +++ +I
Sbjct: 373 IEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALI 419
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 122/238 (51%)
Query: 6 MKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMV 65
+K V N VTY +L+DGYC +N++++A + M G P V++Y+ ++ LC+ +
Sbjct: 299 IKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRI 358
Query: 66 NEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 125
EA LL +M +KI P+ IT N+LI+ CK + +A ++ +M G D+ +Y +
Sbjct: 359 REANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKAL 418
Query: 126 LDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 185
+ CK ++ + +I+KG P TY+ L+DG + + ++ ++ K+G
Sbjct: 419 IHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGL 478
Query: 186 NLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ Y +I +CK D A L ME G + D + F T+ A + G+ +A
Sbjct: 479 CADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEA 536
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 116/227 (51%), Gaps = 1/227 (0%)
Query: 17 YNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMH 76
++ LM Y +N + VF + G+ P + + ++++N L K ++ + + K+M
Sbjct: 136 FSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMV 195
Query: 77 SEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVD 136
++ N YN L+ K+G A +LL EM +G DI TYN+ + CK
Sbjct: 196 KLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHF 255
Query: 137 KGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMI 196
+ +++ ++ G+ P++ TYN + G + GR+++A +F+++ K N+ TY T+I
Sbjct: 256 EALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREI-KDDVTANHVTYTTLI 314
Query: 197 NGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+G C+ DEAL L ME G +T+ +I+ L E G +A
Sbjct: 315 DGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREA 361
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 112/225 (49%), Gaps = 1/225 (0%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G+KP++ L++ + +F M ++GV ++ Y+++++ K +A
Sbjct: 163 GLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKA 222
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
LL +M + + P+ TYN+LI CK A + D M G +I+TYNSF+
Sbjct: 223 EKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHG 282
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
+ + + L +++ D + + TY L+DG C+ I +A + + + +G++
Sbjct: 283 FSREGRMREATRLFREIKD-DVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPG 341
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
TYN+++ LC++G EA L+++M D IT T+I+A
Sbjct: 342 VVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINA 386
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 117/238 (49%), Gaps = 2/238 (0%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
VM +G P VVTYNS++ C + +A + M+ + PD ++ + +IN CK++
Sbjct: 332 VMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIE 391
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
+ A+ + K+M + + +Y +LI G CK ++ NA E L M +G TY+
Sbjct: 392 DMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYS 451
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+D + D+ L+++ +G+ D+ Y L+ +CK ++ A+ +F+ + KK
Sbjct: 452 WLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKK 511
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
G ++ + TM + G EA L M + + + +++I ++ G+ND
Sbjct: 512 GLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSISASY--AGDND 567
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 93/195 (47%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M + ++P+ +T N+L++ YC + ++ A V M + G+ D+ SY +I+G C
Sbjct: 364 LLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFC 423
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K+ + A L M + P TY+ L+DG K +LL+E RG AD+
Sbjct: 424 KVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVA 483
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
Y + +CK VD L + + KG+ D + + + G++ +A +F +
Sbjct: 484 LYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVM 543
Query: 181 FKKGYNLNNWTYNTM 195
+ + +N Y ++
Sbjct: 544 YNRRLMVNLKLYKSI 558
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 97/207 (46%), Gaps = 18/207 (8%)
Query: 55 MINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGL------------------CK 96
MI L K K A LL ++ +++ + + SL+ G+ K
Sbjct: 86 MILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAK 145
Query: 97 TGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCT 156
G ++++ + +++ G + L++L K D + KK++ G+ ++
Sbjct: 146 AGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHV 205
Query: 157 YNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKME 216
YN+L+ K G + A+++ ++ +KG + +TYNT+I+ CK+ + EAL++ +ME
Sbjct: 206 YNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRME 265
Query: 217 DNGCIHDPITFETIISALFEKGENDKA 243
+G + +T+ + I +G +A
Sbjct: 266 RSGVAPNIVTYNSFIHGFSREGRMREA 292
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 126/235 (53%)
Query: 8 QGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNE 67
GV PN +YN LM +CL ++++ A +F M + V PDV SY I+I G C+ VN
Sbjct: 184 HGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNG 243
Query: 68 ALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 127
A+ LL M ++ +P+ ++Y +L++ LC+ ++ A++LL M ++G D++ YN+ +
Sbjct: 244 AMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMIL 303
Query: 128 ALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
C+ ++ ++ G P+ +Y L+ GLC G + ++ +++ KG++
Sbjct: 304 GFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSP 363
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 242
+ N ++ G C G +EA ++ + NG T+E +I + + E++K
Sbjct: 364 HFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEK 418
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 117/218 (53%), Gaps = 5/218 (2%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNE---VNKAQAVFNTMTQMGVFPDVLSYSIMINGLCK 61
M++ P N ++D LV+ + KA +F + GV P+ SY++++ C
Sbjct: 145 MLEFNFTPQPKHLNRILD--VLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCL 202
Query: 62 MKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 121
++ A L +M ++P+ +Y LI G C+ G+V+ A ELLD+M +G D ++
Sbjct: 203 NDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLS 262
Query: 122 YNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF 181
Y + L++LC+ + + L+ ++ KG PD+ YN ++ G C+ R DA++V D+
Sbjct: 263 YTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDML 322
Query: 182 KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 219
G + N+ +Y T+I GLC +G+FDE + +M G
Sbjct: 323 SNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKG 360
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 125/231 (54%), Gaps = 5/231 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ M+++ V P+V +Y L+ G+C +VN A + + M G PD LSY+ ++N LC
Sbjct: 212 LFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLC 271
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + EA LL +M + P+ + YN++I G C+ + +A ++LD+M G + +
Sbjct: 272 RKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSV 331
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
+Y + + LC D+G ++++I KG P N L+ G C G++++A +V + +
Sbjct: 332 SYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVV 391
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 231
K G L++ T+ +I +C E DE+ + +ED + + IT +T I
Sbjct: 392 MKNGETLHSDTWEMVIPLICNE---DESEKIKLFLED--AVKEEITGDTRI 437
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 113/232 (48%), Gaps = 3/232 (1%)
Query: 14 VVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK-MVNEALNLL 72
+ TY L+ Y K + F M + P + +++ L + + +A L
Sbjct: 121 IFTY--LIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELF 178
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 132
K ++PNT +YN L+ C +S A++L +M R D+ +Y + C+
Sbjct: 179 KSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRK 238
Query: 133 HHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 192
V+ + L+ +++KG PD +Y LL+ LC+ ++++A ++ + KG N + Y
Sbjct: 239 GQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHY 298
Query: 193 NTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
NTMI G C+E +A ++ M NGC + +++ T+I L ++G D+ +
Sbjct: 299 NTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGK 350
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 129/239 (53%), Gaps = 1/239 (0%)
Query: 6 MKQGV-KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
MK G KP+ VTY +L+D + +++ + ++ M + G PDV++++I+++ LCK
Sbjct: 319 MKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGN 378
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
EA + L M + I+PN TYN+LI GL + ++ +A EL M G TY
Sbjct: 379 FGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIV 438
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
F+D K + +K+ KGI P++ N L L K GR ++A+++F L G
Sbjct: 439 FIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIG 498
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
++ TYN M+ K G DEA+ L+S+M +NGC D I ++I+ L++ D+A
Sbjct: 499 LVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEA 557
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 136/277 (49%), Gaps = 35/277 (12%)
Query: 2 LAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCK 61
L VM QG+ PN+ TYN+L+ G V+ ++ A +F M +GV P +Y + I+ K
Sbjct: 386 LDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGK 445
Query: 62 MKMVNEALNLLKQMHSEKIIPN-----------------------------------TIT 86
AL ++M ++ I PN ++T
Sbjct: 446 SGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVT 505
Query: 87 YNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVI 146
YN ++ K G++ A +LL EM G D+I NS ++ L K VD+ + ++
Sbjct: 506 YNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMK 565
Query: 147 DKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFD 206
+ ++P + TYN LL GL K G+I++A E+F+ + +KG N T+NT+ + LCK
Sbjct: 566 EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVT 625
Query: 207 EALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
AL ++ KM D GC+ D T+ TII L + G+ +A
Sbjct: 626 LALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEA 662
Score = 130 bits (327), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 131/237 (55%), Gaps = 4/237 (1%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G+ P+ VTYN +M Y V E+++A + + M + G PDV+ + +IN L K V+EA
Sbjct: 498 GLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEA 557
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
+ +M K+ P +TYN+L+ GL K GK+ A EL + M +G P + IT+N+ D
Sbjct: 558 WKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDC 617
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
LCK V + ++ K++D G PD+ TYN ++ GL K G++K+A F + K Y +
Sbjct: 618 LCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYP-D 676
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDP--ITFETIISALFEKGENDKA 243
T T++ G+ K L ++A +++ N C P + +E +I ++ + D A
Sbjct: 677 FVTLCTLLPGVVKASLIEDAYKIITNFLYN-CADQPANLFWEDLIGSILAEAGIDNA 732
Score = 128 bits (321), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 126/225 (56%), Gaps = 2/225 (0%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G P+V TYN L+D Y ++++ ++ M+ + ++++I+I+GL K V++A
Sbjct: 815 GCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDA 874
Query: 69 LNLLKQMHSEK-IIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 127
L+L + S++ P TY LIDGL K+G++ A +L + M G + YN ++
Sbjct: 875 LDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILIN 934
Query: 128 ALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
K D AL K+++ +G++PD+ TY++L+D LC GR+ + F++L + G N
Sbjct: 935 GFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNP 994
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMSKME-DNGCIHDPITFETII 231
+ YN +INGL K +EAL L ++M+ G D T+ ++I
Sbjct: 995 DVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLI 1039
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 115/221 (52%), Gaps = 2/221 (0%)
Query: 25 CLVNEVNKAQAVFNTMTQ-MGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPN 83
C N V+ A+ +F T+ +GV P + +Y+++I GL + M+ A ++ Q+ S IP+
Sbjct: 760 CKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPD 819
Query: 84 TITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIK 143
TYN L+D K+GK+ +EL EM A+ IT+N + L K +VD + L
Sbjct: 820 VATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYY 879
Query: 144 KVI-DKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKE 202
++ D+ P CTY L+DGL K GR+ +A+++F+ + G N YN +ING K
Sbjct: 880 DLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKA 939
Query: 203 GLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
G D A L +M G D T+ ++ L G D+
Sbjct: 940 GEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEG 980
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 118/239 (49%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ +G +P++ TY+SLM G +++ + M +G+ P+V +++I I L +
Sbjct: 214 MILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGK 273
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+NEA +LK+M E P+ +TY LID LC K+ A E+ ++M D +TY +
Sbjct: 274 INEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYIT 333
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
LD +D ++ G PD+ T+ IL+D LCK G +A + + +G
Sbjct: 334 LLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQG 393
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
N TYNT+I GL + D+AL L ME G T+ I + G++ A
Sbjct: 394 ILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSA 452
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 108/194 (55%), Gaps = 1/194 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ G +PN YN L++G+ E + A A+F M + GV PD+ +YS++++ LC +
Sbjct: 917 MLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGR 976
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHV-RGQPADIITYN 123
V+E L+ K++ + P+ + YN +I+GL K+ ++ A L +EM RG D+ TYN
Sbjct: 977 VDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYN 1036
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
S + L V++ + ++ G++P++ T+N L+ G G+ + A V+Q +
Sbjct: 1037 SLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTG 1096
Query: 184 GYNLNNWTYNTMIN 197
G++ N TY + N
Sbjct: 1097 GFSPNTGTYEQLPN 1110
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 112/228 (49%), Gaps = 1/228 (0%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
+M + P TY L+DG + +A+ +F M G P+ Y+I+ING K
Sbjct: 881 LMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAG 940
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
+ A L K+M E + P+ TY+ L+D LC G+V E+ G D++ YN
Sbjct: 941 EADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYN 1000
Query: 124 SFLDALCKGHHVDKGIALIKKV-IDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 182
++ L K H +++ + L ++ +GI PD+ TYN L+ L G +++A +++ ++ +
Sbjct: 1001 LIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQR 1060
Query: 183 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETI 230
G N +T+N +I G G + A + M G + T+E +
Sbjct: 1061 AGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 113 bits (283), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 122/244 (50%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M G+KPNV T+ + ++N+A + M G PDV++Y+++I+ LC
Sbjct: 245 LLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALC 304
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ ++ A + ++M + + P+ +TY +L+D + + + EM G D++
Sbjct: 305 TARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVV 364
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
T+ +DALCK + + + + D+GI P++ TYN L+ GL + R+ DA E+F ++
Sbjct: 365 TFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM 424
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
G +TY I+ K G AL KM+ G + + + +L + G +
Sbjct: 425 ESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRD 484
Query: 241 DKAE 244
+A+
Sbjct: 485 REAK 488
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 109/212 (51%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M +G+ PN+V N+ + +A+ +F + +G+ PD ++Y++M+ K+
Sbjct: 459 MKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGE 518
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++EA+ LL +M P+ I NSLI+ L K +V AW++ M ++TYN+
Sbjct: 519 IDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNT 578
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
L L K + + I L + ++ KG P+ T+N L D LCK + A ++ + G
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG 638
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKME 216
+ +TYNT+I GL K G EA+ +M+
Sbjct: 639 CVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK 670
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 115/242 (47%)
Query: 2 LAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCK 61
L M + G N +YN L+ +A V+ M G P + +YS ++ GL K
Sbjct: 176 LRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGK 235
Query: 62 MKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 121
+ ++ + LLK+M + + PN T+ I L + GK++ A+E+L M G D++T
Sbjct: 236 RRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVT 295
Query: 122 YNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF 181
Y +DALC +D + +K+ +PD TY LLD + ++ + ++
Sbjct: 296 YTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEME 355
Query: 182 KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
K G+ + T+ +++ LCK G F EA + M D G + + T+ T+I L D
Sbjct: 356 KDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLD 415
Query: 242 KA 243
A
Sbjct: 416 DA 417
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 119/239 (49%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M K G P+VVT+ L+D C +A + M G+ P++ +Y+ +I GL ++
Sbjct: 354 MEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHR 413
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+++AL L M S + P TY ID K+G +A E ++M +G +I+ N+
Sbjct: 414 LDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNA 473
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
L +L K + + + D G+ PD TYN+++ K G I +A ++ ++ + G
Sbjct: 474 SLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENG 533
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ N++IN L K DEA + +M++ +T+ T+++ L + G+ +A
Sbjct: 534 CEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEA 592
Score = 107 bits (267), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 118/224 (52%), Gaps = 2/224 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L+ MM+ G +P+V+ NSL++ + V++A +F M +M + P V++Y+ ++ GL
Sbjct: 525 LLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLG 584
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + EA+ L + M + PNTIT+N+L D LCK +V+ A ++L +M G D+
Sbjct: 585 KNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVF 644
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD- 179
TYN+ + L K V + + + + K + PD T LL G+ K I+DA ++ +
Sbjct: 645 TYNTIIFGLVKNGQVKEAMCFFHQ-MKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNF 703
Query: 180 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHD 223
L+ N + +I + E D A++ ++ NG D
Sbjct: 704 LYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRD 747
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 120/240 (50%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
+M K+ +K + TY ++ + + +A M + G + SY+ +I+ L K +
Sbjct: 143 LMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSR 202
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
EA+ + ++M E P+ TY+SL+ GL K + + LL EM G ++ T+
Sbjct: 203 FCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFT 262
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ L + +++ ++K++ D+G PD+ TY +L+D LC ++ A+EVF+ +
Sbjct: 263 ICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTG 322
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ + TY T+++ D S+ME +G + D +TF ++ AL + G +A
Sbjct: 323 RHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEA 382
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 129/277 (46%), Gaps = 39/277 (14%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+++G PN +T+N+L D C +EV A + M MG PDV +Y+ +I GL K
Sbjct: 599 MVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQ 658
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEM--HVRGQPADIITY 122
V EA+ QM + + P+ +T +L+ G+ K + +A++++ + QPA++
Sbjct: 659 VKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWE 717
Query: 123 N---------------SFLDAL--------------------CKGHHVDKGIALIKKVI- 146
+ SF + L CK ++V L +K
Sbjct: 718 DLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTK 777
Query: 147 DKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFD 206
D G+QP + TYN+L+ GL + I+ AQ+VF + G + TYN +++ K G D
Sbjct: 778 DLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKID 837
Query: 207 EALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
E L +M + C + IT +IS L + G D A
Sbjct: 838 ELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDA 874
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 104/216 (48%)
Query: 16 TYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQM 75
T N +++ + ++ + VF+ M + + D +Y + L + +A L++M
Sbjct: 120 TCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKM 179
Query: 76 HSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHV 135
+ N +YN LI L K+ + A E+ M + G + TY+S + L K +
Sbjct: 180 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDI 239
Query: 136 DKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTM 195
D + L+K++ G++P++ T+ I + L + G+I +A E+ + + +G + TY +
Sbjct: 240 DSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 299
Query: 196 INGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 231
I+ LC D A + KM+ D +T+ T++
Sbjct: 300 IDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLL 335
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 93/213 (43%), Gaps = 1/213 (0%)
Query: 32 KAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSE-KIIPNTITYNSL 90
K+ +M + PD+ S + GL + + + K + ++ T T N +
Sbjct: 65 KSSDFSGSMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYM 124
Query: 91 IDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGI 150
++ L GK+ + D M R D TY + +L + + ++K+ + G
Sbjct: 125 LEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGF 184
Query: 151 QPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALT 210
+ +YN L+ L K +A EV++ + +G+ + TY++++ GL K D +
Sbjct: 185 VLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMG 244
Query: 211 LMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
L+ +ME G + TF I L G+ ++A
Sbjct: 245 LLKEMETLGLKPNVYTFTICIRVLGRAGKINEA 277
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 123/230 (53%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M V P+ TY+ L+DGYC N V KA + M + G P +Y +IN L K K
Sbjct: 400 MKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKR 459
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
A L K++ ++ Y +I K GK+S A +L +EM +G D+ YN+
Sbjct: 460 YEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNA 519
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ + K +++ +L++K+ + G + D+ ++NI+L+G + G + A E+F+ + G
Sbjct: 520 LMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSG 579
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
+ TYNT++ G+F+EA +M +M+D G +D IT+ +I+ A+
Sbjct: 580 IKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV 629
Score = 127 bits (318), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 135/243 (55%), Gaps = 7/243 (2%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVF---PDVLSYSIMINGLCK 61
M++ G+ P+VV N+LM+ ++ +V + + + N ++MG++ P V+SY+ +I L +
Sbjct: 329 MLRDGLTPDVVFLNNLMN---ILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFE 385
Query: 62 MKM-VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K V+E + +M ++ + P+ TY+ LIDG CKT +V A LL+EM +G P
Sbjct: 386 SKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPA 445
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
Y S ++AL K + L K++ + Y +++ KCG++ +A ++F ++
Sbjct: 446 AYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEM 505
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+G + + YN +++G+ K G+ +EA +L+ KME+NGC D + I++ G
Sbjct: 506 KNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVP 565
Query: 241 DKA 243
+A
Sbjct: 566 RRA 568
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 109/210 (51%), Gaps = 1/210 (0%)
Query: 10 VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEAL 69
++P Y +L+ Y V +V KA +F M + G P V +Y+ +I GL K V+EA
Sbjct: 264 MQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAY 323
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
K M + + P+ + N+L++ L K G+V + EM + +++YN+ + AL
Sbjct: 324 GFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKAL 383
Query: 130 CKGH-HVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
+ HV + + K+ + P TY+IL+DG CK R++ A + +++ +KG+
Sbjct: 384 FESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPC 443
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDN 218
Y ++IN L K ++ A L ++++N
Sbjct: 444 PAAYCSLINALGKAKRYEAANELFKELKEN 473
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 116/261 (44%), Gaps = 37/261 (14%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMG-VFPDVLSYSIMINGLCKMKMVNEAL 69
KP TYNS++ + K V+ M G FPD ++YS +I+ K+ + A+
Sbjct: 194 KPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAI 253
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
L +M + P Y +L+ K GKV A +L +EM G + TY + L
Sbjct: 254 RLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGL 313
Query: 130 CKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD---------- 179
K VD+ K ++ G+ PD+ N L++ L K GR+++ VF +
Sbjct: 314 GKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTV 373
Query: 180 ---------LFKKGYN---LNNW--------------TYNTMINGLCKEGLFDEALTLMS 213
LF+ + +++W TY+ +I+G CK ++AL L+
Sbjct: 374 VSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLE 433
Query: 214 KMEDNGCIHDPITFETIISAL 234
+M++ G P + ++I+AL
Sbjct: 434 EMDEKGFPPCPAAYCSLINAL 454
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 98/200 (49%), Gaps = 3/200 (1%)
Query: 41 TQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKV 100
T + V P VLS ++ L + KMV++AL++ Q K P + TYNS+I L + G+
Sbjct: 156 TYVSVSPAVLSE--LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQH 213
Query: 101 SNAWELLDEMHVRGQ-PADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNI 159
E+ EM G D ITY++ + + K D I L ++ D +QP Y
Sbjct: 214 EKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTT 273
Query: 160 LLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 219
LL K G+++ A ++F+++ + G + +TY +I GL K G DEA M +G
Sbjct: 274 LLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDG 333
Query: 220 CIHDPITFETIISALFEKGE 239
D + +++ L + G
Sbjct: 334 LTPDVVFLNNLMNILGKVGR 353
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 67/130 (51%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M QG P+V YN+LM G +N+A ++ M + G D+ S++I++NG + +
Sbjct: 505 MKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGV 564
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
A+ + + + I P+ +TYN+L+ G A ++ EM +G D ITY+S
Sbjct: 565 PRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSS 624
Query: 125 FLDALCKGHH 134
LDA+ H
Sbjct: 625 ILDAVGNVDH 634
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 83/161 (51%)
Query: 17 YNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMH 76
Y ++ + ++++A +FN M G PDV +Y+ +++G+ K M+NEA +LL++M
Sbjct: 482 YAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKME 541
Query: 77 SEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVD 136
+ ++N +++G +TG A E+ + + G D +TYN+ L +
Sbjct: 542 ENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFE 601
Query: 137 KGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVF 177
+ +++++ DKG + D TY+ +LD + KD F
Sbjct: 602 EAARMMREMKDKGFEYDAITYSSILDAVGNVDHEKDDVSSF 642
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 122/232 (52%)
Query: 3 AVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKM 62
+ M K G +P++VTYN L++ Y N + +A+ V M + G+ D SY+ ++ C++
Sbjct: 244 SYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRV 303
Query: 63 KMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 122
++ N + + + + ++Y++LI+ C+ A+ L +EM +G +++TY
Sbjct: 304 SHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTY 363
Query: 123 NSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 182
S + A + + L+ ++ + G+ PD Y +LD LCK G + A VF D+ +
Sbjct: 364 TSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIE 423
Query: 183 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
+ +YN++I+GLC+ G EA+ L M+ C D +TF+ II L
Sbjct: 424 HEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGL 475
Score = 131 bits (329), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 121/233 (51%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
++A M++ G++ + +YN L+ +C V+ +K + F DV+SYS +I C
Sbjct: 277 VMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFC 336
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ +A L ++M + ++ N +TY SLI + G S A +LLD+M G D I
Sbjct: 337 RASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRI 396
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
Y + LD LCK +VDK + +I+ I PD +YN L+ GLC+ GR+ +A ++F+D+
Sbjct: 397 FYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDM 456
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
K + T+ +I GL + A + +M D G D +T+I A
Sbjct: 457 KGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKA 509
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 120/245 (48%), Gaps = 3/245 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L+ M G P++ +N +D C N+V A F M Q G PDV+SY+I+INGL
Sbjct: 101 LLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLF 160
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELL-DEMHVRGQPADI 119
+ V +A+ + M + P+ +L+ GLC KV A+E++ +E+
Sbjct: 161 RAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLST 220
Query: 120 ITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
+ YN+ + CK ++K AL + G +PD+ TYN+LL+ +K A+ V +
Sbjct: 221 VVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAE 280
Query: 180 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSK-MEDNGCIHDPITFETIISALFEKG 238
+ + G L+ ++YN ++ C+ D+ M K ME G D +++ T+I
Sbjct: 281 MVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRG-FCDVVSYSTLIETFCRAS 339
Query: 239 ENDKA 243
KA
Sbjct: 340 NTRKA 344
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 129/245 (52%), Gaps = 9/245 (3%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+++G +P+VV+Y L++G +V A ++N M + GV PD + + ++ GLC +
Sbjct: 140 MVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARK 199
Query: 65 VNEALNLL-KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
V+ A ++ +++ S ++ +T+ YN+LI G CK G++ A L M G D++TYN
Sbjct: 200 VDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYN 259
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK- 182
L+ + + + ++ +++ GIQ D +YN LL C R+ + + + K
Sbjct: 260 VLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHC---RVSHPDKCYNFMVKE 316
Query: 183 ---KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
+G+ + +Y+T+I C+ +A L +M G + + +T+ ++I A +G
Sbjct: 317 MEPRGF-CDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGN 375
Query: 240 NDKAE 244
+ A+
Sbjct: 376 SSVAK 380
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 123/235 (52%), Gaps = 2/235 (0%)
Query: 10 VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEAL 69
VK + V YN+L+ G+C + KA+A+ + M+++G PD+++Y++++N M+ A
Sbjct: 216 VKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAE 275
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELL-DEMHVRGQPADIITYNSFLDA 128
++ +M I + +YN L+ C+ + + EM RG D+++Y++ ++
Sbjct: 276 GVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF-CDVVSYSTLIET 334
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
C+ + K L +++ KG+ ++ TY L+ + G A+++ + + G + +
Sbjct: 335 FCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPD 394
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
Y T+++ LCK G D+A + + M ++ D I++ ++IS L G +A
Sbjct: 395 RIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEA 449
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 100/188 (53%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
+VV+Y++L++ +C + KA +F M Q G+ +V++Y+ +I + + A LL
Sbjct: 324 DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL 383
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 132
QM + P+ I Y +++D LCK+G V A+ + ++M D I+YNS + LC+
Sbjct: 384 DQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRS 443
Query: 133 HHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 192
V + I L + + K PD T+ ++ GL + ++ A +V+ + KG+ L+
Sbjct: 444 GRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVS 503
Query: 193 NTMINGLC 200
+T+I C
Sbjct: 504 DTLIKASC 511
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 1/229 (0%)
Query: 17 YNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMH 76
YN + + A+A++ M MG +YS I+GLCK+K + LL M
Sbjct: 47 YNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDME 106
Query: 77 SEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVD 136
+ IP+ +N +D LC+ KV A + M RG+ D+++Y ++ L + V
Sbjct: 107 TLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVT 166
Query: 137 KGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY-NLNNWTYNTM 195
+ + +I G+ PD L+ GLC ++ A E+ + K L+ YN +
Sbjct: 167 DAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNAL 226
Query: 196 INGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
I+G CK G ++A L S M GC D +T+ +++ ++ +AE
Sbjct: 227 ISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAE 275
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 90/161 (55%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M ++G+ NVVTY SL+ + + A+ + + MT++G+ PD + Y+ +++ LCK
Sbjct: 351 MRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGN 410
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V++A + M +I P+ I+YNSLI GLC++G+V+ A +L ++M + D +T+
Sbjct: 411 VDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKF 470
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLC 165
+ L +G + + +++DKG D + L+ C
Sbjct: 471 IIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 75/130 (57%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M + G+ P+ + Y +++D C V+KA VFN M + + PD +SY+ +I+GLC
Sbjct: 382 LLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLC 441
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ V EA+ L + M ++ P+ +T+ +I GL + K+S A+++ D+M +G D
Sbjct: 442 RSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRD 501
Query: 121 TYNSFLDALC 130
++ + A C
Sbjct: 502 VSDTLIKASC 511
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%)
Query: 50 LSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDE 109
L+Y I L K M++ A+ + +M + YN I L + + A + +
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWD 69
Query: 110 MHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGR 169
M G TY+ F+ LCK D AL+ + G PD+ +N+ LD LC+ +
Sbjct: 70 MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129
Query: 170 IKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHD 223
+ A + F + ++G + +Y +INGL + G +A+ + + M +G D
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPD 183
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 66/155 (42%)
Query: 85 ITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKK 144
+ Y S I L K+G + NA ++ DEM YN F+ L + + A+
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWD 69
Query: 145 VIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGL 204
+ G TY+ + GLCK + + D+ G+ + W +N ++ LC+E
Sbjct: 70 MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129
Query: 205 FDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
A+ M G D +++ +I+ LF G+
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGK 164
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 130 bits (328), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 114/211 (54%), Gaps = 1/211 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
L M +G+ PN+VT+N+ + GY + +V K V + G PDV+++S++IN LC
Sbjct: 447 FLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLC 506
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ K + +A + K+M I PN ITYN LI C TG + +L +M G D+
Sbjct: 507 RAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLY 566
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
YN+ + + CK V K L+K ++ G++PD TY+ L+ L + GR +A+E+F +
Sbjct: 567 AYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSI 626
Query: 181 FKKGYNLNNWTYNTMIN-GLCKEGLFDEALT 210
+ G +++T + L K GL E ++
Sbjct: 627 ERHGCVPDSYTKRLVEELDLRKSGLSRETVS 657
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 126/238 (52%)
Query: 7 KQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVN 66
++G P+ T+N+ M +++ + +F+ GV P Y +++ L + +
Sbjct: 348 ERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFS 407
Query: 67 EALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 126
E LKQM + ++ + +YN++ID LCK ++ NA L EM RG +++T+N+FL
Sbjct: 408 EGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFL 467
Query: 127 DALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 186
V K +++K++ G +PD+ T++++++ LC+ IKDA + F+++ + G
Sbjct: 468 SGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIE 527
Query: 187 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
N TYN +I C G D ++ L +KM++NG D + I + + + KAE
Sbjct: 528 PNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAE 585
Score = 120 bits (301), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 117/225 (52%)
Query: 2 LAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCK 61
L M G+ +V +YN+++D C + A M G+ P++++++ ++G
Sbjct: 413 LKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSV 472
Query: 62 MKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 121
V + +L+++ P+ IT++ +I+ LC+ ++ +A++ EM G + IT
Sbjct: 473 RGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEIT 532
Query: 122 YNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF 181
YN + + C D+ + L K+ + G+ PD+ YN + CK ++K A+E+ + +
Sbjct: 533 YNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTML 592
Query: 182 KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPIT 226
+ G +N+TY+T+I L + G EA + S +E +GC+ D T
Sbjct: 593 RIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYT 637
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 112/240 (46%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
+ +GVKP Y L+ ++ M G+ V SY+ +I+ LCK +
Sbjct: 381 FVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARR 440
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ A L +M I PN +T+N+ + G G V +L+++ V G D+IT++
Sbjct: 441 IENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSL 500
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++ LC+ + K++++ GI+P+ TYNIL+ C G + ++F + + G
Sbjct: 501 IINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENG 560
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ + + YN I CK +A L+ M G D T+ T+I AL E G +A
Sbjct: 561 LSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAR 620
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 118/273 (43%), Gaps = 35/273 (12%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M G KP+ TYN L+ G C V++A + M Q G P+V +Y+I+I+G
Sbjct: 206 MRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGR 265
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGL------CKTGKV------------------ 100
V+EAL L+ M K+ PN T + + G+ CK +V
Sbjct: 266 VDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDA 325
Query: 101 -----------SNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKG 149
+ L ++ RG D T+N+ + L KGH + + + + +G
Sbjct: 326 VLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRG 385
Query: 150 IQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEAL 209
++P Y +L+ L R + + + G + ++YN +I+ LCK + A
Sbjct: 386 VKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAA 445
Query: 210 TLMSKMEDNGCIHDPITFETIISALFEKGENDK 242
+++M+D G + +TF T +S +G+ K
Sbjct: 446 MFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKK 478
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%)
Query: 36 VFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLC 95
VF ++ +G+ P Y+ +I+ L K ++ A +QM S+ P+ TYN LI G+C
Sbjct: 167 VFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVC 226
Query: 96 KTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMC 155
K G V A L+ +M G ++ TY +D VD+ + ++ + + + P+
Sbjct: 227 KKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEA 286
Query: 156 TYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM 215
T + G+ +C A EV +K NL Y+ ++ L + E + K+
Sbjct: 287 TIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKI 346
Query: 216 EDNGCIHDPITFETIISALFE 236
+ G I D TF +S L +
Sbjct: 347 GERGYIPDSSTFNAAMSCLLK 367
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%)
Query: 149 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 208
G++P YN ++D L K + A FQ + G + +TYN +I+G+CK+G+ DEA
Sbjct: 175 GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEA 234
Query: 209 LTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ L+ +ME G + T+ +I G D+A
Sbjct: 235 IRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEA 269
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 113/221 (51%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALN 70
KP+V TYN L++ C + A + ++ G+ P+ LSY+ +I CK K + A
Sbjct: 342 KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASK 401
Query: 71 LLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 130
LL QM P+ +TY LI GL +G + +A + ++ RG D YN + LC
Sbjct: 402 LLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLC 461
Query: 131 KGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 190
K L +++D+ I PD Y L+DG + G +A++VF +KG ++
Sbjct: 462 KTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVV 521
Query: 191 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 231
+N MI G C+ G+ DEAL M++M + + D T+ TII
Sbjct: 522 HHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTII 562
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 129/244 (52%), Gaps = 2/244 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDG-YCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGL 59
+L+ + ++G++ +V N+++D Y +V+ A+++ + PDV +Y+I+IN L
Sbjct: 297 LLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESI-GWIIANDCKPDVATYNILINRL 355
Query: 60 CKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADI 119
CK A+ L + + +IPN ++Y LI CK+ + A +LL +M RG DI
Sbjct: 356 CKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDI 415
Query: 120 ITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
+TY + L H+D + + K+ID+G+ PD YN+L+ GLCK GR A+ +F +
Sbjct: 416 VTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSE 475
Query: 180 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
+ + + + Y T+I+G + G FDEA + S + G D + +I G
Sbjct: 476 MLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGM 535
Query: 240 NDKA 243
D+A
Sbjct: 536 LDEA 539
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 124/272 (45%), Gaps = 35/272 (12%)
Query: 8 QGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNE 67
+G PN+V YN+++ GYC + ++ A VF + G P + ++ MING CK
Sbjct: 234 KGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVA 293
Query: 68 ALNLLKQM---------------------HSEKI--------------IPNTITYNSLID 92
+ LL ++ H K+ P+ TYN LI+
Sbjct: 294 SDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILIN 353
Query: 93 GLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQP 152
LCK GK A LDE +G + ++Y + A CK D L+ ++ ++G +P
Sbjct: 354 RLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKP 413
Query: 153 DMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLM 212
D+ TY IL+ GL G + DA + L +G + + YN +++GLCK G F A L
Sbjct: 414 DIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLF 473
Query: 213 SKMEDNGCIHDPITFETIISALFEKGENDKAE 244
S+M D + D + T+I G+ D+A
Sbjct: 474 SEMLDRNILPDAYVYATLIDGFIRSGDFDEAR 505
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 123/238 (51%)
Query: 7 KQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVN 66
K+G+ PN ++Y L+ YC E + A + M + G PD+++Y I+I+GL ++
Sbjct: 373 KKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMD 432
Query: 67 EALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 126
+A+N+ ++ + P+ YN L+ GLCKTG+ A L EM R D Y + +
Sbjct: 433 DAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLI 492
Query: 127 DALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 186
D + D+ + ++KG++ D+ +N ++ G C+ G + +A + ++
Sbjct: 493 DGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLV 552
Query: 187 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ +TY+T+I+G K+ A+ + ME N C + +T+ ++I+ +G+ AE
Sbjct: 553 PDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAE 610
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 122/234 (52%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M ++G KP++VTY L+ G + ++ A + + GV PD Y+++++GLC
Sbjct: 402 LLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLC 461
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K A L +M I+P+ Y +LIDG ++G A ++ +G D++
Sbjct: 462 KTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVV 521
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
+N+ + C+ +D+ +A + ++ ++ + PD TY+ ++DG K + A ++F+ +
Sbjct: 522 HHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYM 581
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
K N TY ++ING C +G F A +M+ + + +T+ T+I +L
Sbjct: 582 EKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSL 635
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 122/249 (48%), Gaps = 15/249 (6%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ ++ +++GVK +VV +N+++ G+C +++A A N M + + PD +YS +I+G
Sbjct: 507 VFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYV 566
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + + A+ + + M K PN +TY SLI+G C G A E EM +R +++
Sbjct: 567 KQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVV 626
Query: 121 TYNSFLDALCK-GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCK--CGRI------- 170
TY + + +L K ++K + + ++ P+ T+N LL G K G++
Sbjct: 627 TYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGS 686
Query: 171 -KDAQEVFQDLFKK----GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPI 225
+F + F + G++ + YN+ + LC G+ A KM G DP+
Sbjct: 687 NHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPV 746
Query: 226 TFETIISAL 234
+F I+
Sbjct: 747 SFAAILHGF 755
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 118/267 (44%), Gaps = 35/267 (13%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNL 71
P+V+ NSL+ + A+ V++ M G D S I++ G+C V L
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 72 LKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 131
++ + IPN + YN++I G CK G + NA+ + E+ ++G + T+ + ++ CK
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287
Query: 132 GHHVDKGIALIKKVIDKGIQ-----------------------------------PDMCT 156
L+ +V ++G++ PD+ T
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVAT 347
Query: 157 YNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKME 216
YNIL++ LCK G+ + A + KKG NN +Y +I CK +D A L+ +M
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMA 407
Query: 217 DNGCIHDPITFETIISALFEKGENDKA 243
+ GC D +T+ +I L G D A
Sbjct: 408 ERGCKPDIVTYGILIHGLVVSGHMDDA 434
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 112/234 (47%), Gaps = 1/234 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
++ +GV P+ YN LM G C A+ +F+ M + PD Y+ +I+G +
Sbjct: 441 LIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGD 500
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+EA + + + + + +N++I G C++G + A ++ M+ D TY++
Sbjct: 501 FDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYST 560
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D K + I + + + +P++ TY L++G C G K A+E F+++ +
Sbjct: 561 IIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRD 620
Query: 185 YNLNNWTYNTMINGLCKE-GLFDEALTLMSKMEDNGCIHDPITFETIISALFEK 237
N TY T+I L KE ++A+ M N C+ + +TF ++ +K
Sbjct: 621 LVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKK 674
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 108/241 (44%), Gaps = 17/241 (7%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ M K KPNVVTY SL++G+C + A+ F M + P+V++Y+ +I L
Sbjct: 577 IFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLA 636
Query: 61 K-MKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCK--TGKV------------SNAWE 105
K + +A+ + M + K +PN +T+N L+ G K +GKV S E
Sbjct: 637 KESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSE 696
Query: 106 LLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLC 165
M G YNS L LC V K++ KG PD ++ +L G C
Sbjct: 697 FFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFC 756
Query: 166 KCGRIKDAQEV-FQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDP 224
G K + + F +L +KG + Y+ ++ + + EA T++ M + +P
Sbjct: 757 VVGNSKQWRNMDFCNLGEKGLEV-AVRYSQVLEQHLPQPVICEASTILHAMVEKADTKEP 815
Query: 225 I 225
+
Sbjct: 816 V 816
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 87/165 (52%), Gaps = 1/165 (0%)
Query: 81 IPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIA 140
+P+ I NSL+ L K+ ++ +A ++ DEM RG D + + +C V+ G
Sbjct: 167 VPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRK 226
Query: 141 LIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLC 200
LI+ KG P++ YN ++ G CK G I++A VF++L KG+ T+ TMING C
Sbjct: 227 LIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFC 286
Query: 201 KEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN-DKAE 244
KEG F + L+S++++ G II A + G D AE
Sbjct: 287 KEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAE 331
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 135/243 (55%), Gaps = 3/243 (1%)
Query: 2 LAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCK 61
+ VM+K PNVVTY++ +D +C E+ A F++M + + P+V++++ +I+G CK
Sbjct: 152 MGVMLK-CCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCK 210
Query: 62 MKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEM-HVRGQPADII 120
+ A++L K+M ++ N +TY +LIDG CK G++ A E+ M R +P ++
Sbjct: 211 AGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLV 270
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
Y + +D + D + + K++++G++ D+ Y +++ GLC G++K+A E+ +D+
Sbjct: 271 -YTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDM 329
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
K + + TM+N K G A+ + K+ + G D + T+I + + G+
Sbjct: 330 EKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQL 389
Query: 241 DKA 243
+A
Sbjct: 390 HEA 392
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 133/246 (54%), Gaps = 4/246 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
LA ++ +G P+ ++NS++ C + +V A+ + ++M + G PDV+SY+ +I+G C
Sbjct: 43 FLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHC 102
Query: 61 K---MKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPA 117
+ ++ + L L+ H P+ +++NSL +G K + + + M P
Sbjct: 103 RNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSP- 161
Query: 118 DIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVF 177
+++TY++++D CK + + + + P++ T+ L+DG CK G ++ A ++
Sbjct: 162 NVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLY 221
Query: 178 QDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK 237
+++ + +LN TY +I+G CK+G A + S+M ++ + + + TII F++
Sbjct: 222 KEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQR 281
Query: 238 GENDKA 243
G++D A
Sbjct: 282 GDSDNA 287
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 127/264 (48%), Gaps = 30/264 (11%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M + + PNVVT+ L+DGYC ++ A +++ M ++ + +V++Y+ +I+G CK
Sbjct: 189 MKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGE 248
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ A + +M +++ PN++ Y ++IDG + G NA + L +M +G DI Y
Sbjct: 249 MQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGV 308
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ LC + + +++ + + PDM + +++ K GR+K A ++ L ++G
Sbjct: 309 IISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERG 368
Query: 185 YN------------------------------LNNWTYNTMINGLCKEGLFDEALTLMSK 214
+ N+ Y +I+ LCKEG F E L SK
Sbjct: 369 FEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSK 428
Query: 215 MEDNGCIHDPITFETIISALFEKG 238
+ + G + D + + I+ L ++G
Sbjct: 429 ISEAGLVPDKFMYTSWIAGLCKQG 452
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 122/240 (50%), Gaps = 9/240 (3%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M + M++ V+PN + Y +++DG+ + + A M G+ D+ +Y ++I+GLC
Sbjct: 255 MYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLC 314
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ EA +++ M ++P+ + + ++++ K+G++ A + ++ RG D++
Sbjct: 315 GNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVV 374
Query: 121 TYNSFLDALCKGHHVDKGIAL--IKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 178
++ +D + K + + I I+K D Y +L+D LCK G + + +F
Sbjct: 375 ALSTMIDGIAKNGQLHEAIVYFCIEKAND-------VMYTVLIDALCKEGDFIEVERLFS 427
Query: 179 DLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
+ + G + + Y + I GLCK+G +A L ++M G + D + + T+I L KG
Sbjct: 428 KISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKG 487
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 108/209 (51%), Gaps = 6/209 (2%)
Query: 40 MTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGK 99
+ G P S++ +++ +CK+ V A +++ M P+ I+YNSLIDG C+ G
Sbjct: 47 LVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGD 106
Query: 100 VSNAWELLDEMHVRG----QPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMC 155
+ +A +L+ + +P DI+++NS + K +D+ + + V+ K P++
Sbjct: 107 IRSASLVLESLRASHGFICKP-DIVSFNSLFNGFSKMKMLDE-VFVYMGVMLKCCSPNVV 164
Query: 156 TYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM 215
TY+ +D CK G ++ A + F + + + N T+ +I+G CK G + A++L +M
Sbjct: 165 TYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEM 224
Query: 216 EDNGCIHDPITFETIISALFEKGENDKAE 244
+ +T+ +I +KGE +AE
Sbjct: 225 RRVRMSLNVVTYTALIDGFCKKGEMQRAE 253
Score = 90.5 bits (223), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 106/217 (48%), Gaps = 5/217 (2%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M K + P++V + ++M+ Y + A +++ + + G PDV++ S MI+G+ K
Sbjct: 329 MEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQ 388
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++EA+ EK N + Y LID LCK G L ++ G D Y S
Sbjct: 389 LHEAIVYF---CIEK--ANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTS 443
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++ LCK ++ L +++ +G+ D+ Y L+ GL G + +A++VF ++ G
Sbjct: 444 WIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSG 503
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCI 221
+ ++ ++ +I KEG A L+ M+ G +
Sbjct: 504 ISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLV 540
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 4/179 (2%)
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
MV EAL L ++ +P+ T N I L + + + L + RG ++N
Sbjct: 1 MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFN 60
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL-FK 182
S + +CK V ++ + G +PD+ +YN L+DG C+ G I+ A V + L
Sbjct: 61 SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120
Query: 183 KGY--NLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
G+ + ++N++ NG K + DE M M C + +T+ T I + GE
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVTYSTWIDTFCKSGE 178
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 58/114 (50%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ + + + G+ P+ Y S + G C + A + M Q G+ D+L+Y+ +I GL
Sbjct: 425 LFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLA 484
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRG 114
++ EA + +M + I P++ ++ LI K G ++ A +LL +M RG
Sbjct: 485 SKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRG 538
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 128/250 (51%), Gaps = 7/250 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQM-GVFPDVLSYSIMINGL 59
+ M + G+ P+V+T+NSL+ A +F+ M + GV PD +++ +ING
Sbjct: 160 LFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGF 219
Query: 60 CKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPA-- 117
CK MV+EA + K M P+ +TYN++IDGLC+ GKV A +L M +
Sbjct: 220 CKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHP 279
Query: 118 DIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVF 177
++++Y + + C +D+ + + ++ +G++P+ TYN L+ GL + R + +++
Sbjct: 280 NVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDIL 339
Query: 178 ---QDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
D F + + T+N +I C G D A+ + +M + D ++ +I L
Sbjct: 340 IGGNDAFTT-FAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTL 398
Query: 235 FEKGENDKAE 244
+ E D+AE
Sbjct: 399 CMRNEFDRAE 408
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 120/236 (50%), Gaps = 13/236 (5%)
Query: 17 YNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQM- 75
+NSL+ Y ++ +F TM QMG+ P VL+++ +++ L K A +L +M
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 76 HSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK---- 131
+ + P++ T+N+LI+G CK V A+ + +M + D++TYN+ +D LC+
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 132 --GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 189
H+V G ++KK D + P++ +Y L+ G C I +A VF D+ +G N
Sbjct: 261 KIAHNVLSG--MLKKATD--VHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNA 316
Query: 190 WTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDP--ITFETIISALFEKGENDKA 243
TYNT+I GL + +DE ++ D P TF +I A + G D A
Sbjct: 317 VTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAA 372
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 110/240 (45%), Gaps = 10/240 (4%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNL 71
P+ T+N L+ +C ++ A VF M M + PD SYS++I LC + A L
Sbjct: 351 PDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETL 410
Query: 72 LKQMHSEKII-------PNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++ ++++ P YN + + LC GK A ++ ++ RG D +Y +
Sbjct: 411 FNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRG-VQDPPSYKT 469
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ C+ L+ ++ + PD+ TY +L+DGL K G A + Q + +
Sbjct: 470 LITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSS 529
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFET-IISALFEKGENDKA 243
Y T+++++ L K +E+ L++ M + I I T ++ LF + +KA
Sbjct: 530 YLPVATTFHSVLAELAKRKFANESFCLVTLMLEKR-IRQNIDLSTQVVRLLFSSAQKEKA 588
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 101/245 (41%), Gaps = 33/245 (13%)
Query: 7 KQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVN 66
K KP YN + + C + +A+ VF + + GV D SY +I G C+
Sbjct: 423 KDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGV-QDPPSYKTLITGHCREGKFK 481
Query: 67 EALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 126
A LL M + +P+ TY LIDGL K G+ A + L M T++S L
Sbjct: 482 PAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVL 541
Query: 127 DALCKGHHVDKGIALIKKVIDKGIQP--DMCTYNI------------------------- 159
L K ++ L+ +++K I+ D+ T +
Sbjct: 542 AELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYL 601
Query: 160 -----LLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSK 214
LL LC+ ++ DA + +K ++ T NT+I GLCK EA +L ++
Sbjct: 602 VKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNE 661
Query: 215 MEDNG 219
+ + G
Sbjct: 662 LVELG 666
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 96/214 (44%), Gaps = 4/214 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L +M+++ P++ TY L+DG + E A M + P ++ ++ L
Sbjct: 486 LLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELA 545
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K K NE+ L+ M ++I N ++ L + + A+ ++ ++ G ++
Sbjct: 546 KRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGY---LV 602
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
L LC+ + L+ ++K D+ T N +++GLCK R +A ++ +L
Sbjct: 603 KMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNEL 662
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSK 214
+ G + + + N L G ++E L +SK
Sbjct: 663 VELGNHQQLSCHVVLRNALEAAGKWEE-LQFVSK 695
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 124/238 (52%), Gaps = 6/238 (2%)
Query: 5 MMKQGVK-PNVVTYNSLMDGYCLVNEVNKAQAV--FNTM-TQMGVFPDVLSYSIMINGLC 60
M + G+ PN +TY++LMD CL +AV F M ++ G+ PD +++++MING C
Sbjct: 222 MKRSGISYPNSITYSTLMD--CLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFC 279
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ V A +L M PN Y++L++G CK GK+ A + DE+ G D +
Sbjct: 280 RAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTV 339
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
Y + ++ C+ D+ + L+ ++ + D TYN++L GL GR ++A ++
Sbjct: 340 GYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQW 399
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
+G +LN +Y ++N LC G ++A+ +S M + G T+ ++ L E G
Sbjct: 400 GSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESG 457
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 131/237 (55%), Gaps = 3/237 (1%)
Query: 10 VKPNVVTYNSLMDGYCLVNEVNKAQAVF-NTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
VKP++ ++ ++ EVN ++ + +G+ P+ ++I++ CK +N A
Sbjct: 156 VKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFA 215
Query: 69 LNLLKQMHSEKI-IPNTITYNSLIDGLCKTGKVSNAWELLDEMHVR-GQPADIITYNSFL 126
++++M I PN+ITY++L+D L + A EL ++M + G D +T+N +
Sbjct: 216 FLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMI 275
Query: 127 DALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 186
+ C+ V++ ++ + G P++ Y+ L++G CK G+I++A++ F ++ K G
Sbjct: 276 NGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLK 335
Query: 187 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
L+ Y T++N C+ G DEA+ L+ +M+ + C D +T+ I+ L +G +++A
Sbjct: 336 LDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEA 392
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 122/228 (53%)
Query: 7 KQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVN 66
K+G+ P+ VT+N +++G+C EV +A+ + + M + G P+V +YS ++NG CK+ +
Sbjct: 261 KEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQ 320
Query: 67 EALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 126
EA ++ + +T+ Y +L++ C+ G+ A +LL EM AD +TYN L
Sbjct: 321 EAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVIL 380
Query: 127 DALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 186
L ++ + ++ + +G+ + +Y I+L+ LC G ++ A + + ++G
Sbjct: 381 RGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIW 440
Query: 187 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
++ T+N ++ LC+ G + + ++ G I P ++ ++ ++
Sbjct: 441 PHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESI 488
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 123/237 (51%), Gaps = 2/237 (0%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGV-FPDVLSYSIMINGLCKMKMVNE 67
G++PN +N L+ +C ++N A V M + G+ +P+ ++YS +++ L E
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 68 ALNLLKQMHS-EKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 126
A+ L + M S E I P+ +T+N +I+G C+ G+V A ++LD M G ++ Y++ +
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALM 310
Query: 127 DALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 186
+ CK + + +V G++ D Y L++ C+ G +A ++ ++
Sbjct: 311 NGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCR 370
Query: 187 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ TYN ++ GL EG +EAL ++ + G + ++ I++AL GE +KA
Sbjct: 371 ADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKA 427
Score = 110 bits (275), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 107/202 (52%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M K G PNV Y++LM+G+C V ++ +A+ F+ + + G+ D + Y+ ++N C
Sbjct: 290 ILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFC 349
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ +EA+ LL +M + + +T+TYN ++ GL G+ A ++LD+ G +
Sbjct: 350 RNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKG 409
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
+Y L+ALC ++K + + + ++GI P T+N L+ LC+ G + V
Sbjct: 410 SYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGF 469
Query: 181 FKKGYNLNNWTYNTMINGLCKE 202
+ G ++ ++ +CKE
Sbjct: 470 LRIGLIPGPKSWGAVVESICKE 491
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 85/174 (48%)
Query: 7 KQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVN 66
K G+K + V Y +LM+ +C E ++A + M D L+Y++++ GL
Sbjct: 331 KTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSE 390
Query: 67 EALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 126
EAL +L Q SE + N +Y +++ LC G++ A + L M RG T+N +
Sbjct: 391 EALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELV 450
Query: 127 DALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
LC+ + + G+ ++ + G+ P ++ +++ +CK ++ E+ L
Sbjct: 451 VRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSL 504
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 104/228 (45%), Gaps = 37/228 (16%)
Query: 20 LMDGYCLVNEVNKAQAVFNTMTQMG-VFPDVLSYSIMINGLCKMKMVNEALNLL-KQMHS 77
LM + + +K +FN + + V P + + S +N L VN + LL H+
Sbjct: 130 LMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHN 189
Query: 78 EKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDK 137
+ PNT +N L+ CK G ++ A+ +++EM G I+Y
Sbjct: 190 LGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSG-----ISY--------------- 229
Query: 138 GIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF-KKGYNLNNWTYNTMI 196
P+ TY+ L+D L R K+A E+F+D+ K+G + + T+N MI
Sbjct: 230 --------------PNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMI 275
Query: 197 NGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
NG C+ G + A ++ M+ NGC + + +++ + G+ +A+
Sbjct: 276 NGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAK 323
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 56/110 (50%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
ML +GV N +Y +++ C E+ KA + M++ G++P +++ ++ LC
Sbjct: 395 MLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLC 454
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEM 110
+ + +L +IP ++ ++++ +CK K+ + +ELLD +
Sbjct: 455 ESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSL 504
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 128 bits (321), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 128/234 (54%)
Query: 10 VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEAL 69
++PN V++N L+ G+ + A VF+ M +M V P V++Y+ +I LC+ + +A
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
+LL+ M ++I PN +T+ L+ GLC G+ + A +L+ +M RG ++ Y + L
Sbjct: 242 SLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDL 301
Query: 130 CKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 189
K +D+ L+ ++ + I+PD+ YNIL++ LC R+ +A V ++ KG N
Sbjct: 302 GKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNA 361
Query: 190 WTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
TY MI+G C+ FD L +++ M + P TF +++ L + G D A
Sbjct: 362 ATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHA 415
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 113/212 (53%), Gaps = 2/212 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M+K+ ++PN VT+ LM G C E N+A+ + M G P +++Y I+++ L
Sbjct: 243 LLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLG 302
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K ++EA LL +M +I P+ + YN L++ LC +V A+ +L EM ++G +
Sbjct: 303 KRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAA 362
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY +D C+ D G+ ++ ++ P T+ ++ GL K G + A V + +
Sbjct: 363 TYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVM 422
Query: 181 FKKGYNLNNWTYNTMINGLCKE--GLFDEALT 210
KK + + + +++ LC + G++ EAL+
Sbjct: 423 GKKNLSFGSGAWQNLLSDLCIKDGGVYCEALS 454
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 105/211 (49%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ V+P+VVTYNSL+ C +++ KA+++ M + + P+ +++ +++ GLC
Sbjct: 212 MLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGE 271
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
NEA L+ M P + Y L+ L K G++ A LL EM R D++ YN
Sbjct: 272 YNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNI 331
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++ LC V + ++ ++ KG +P+ TY +++DG C+ V +
Sbjct: 332 LVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASR 391
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKM 215
+ T+ M+ GL K G D A ++ M
Sbjct: 392 HCPTPATFVCMVAGLIKGGNLDHACFVLEVM 422
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 116/235 (49%), Gaps = 2/235 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L ++ + V+ + L+ Y V+KA VF+ +T + S + +IN L
Sbjct: 103 ILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLV 162
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEM-HVRGQPADI 119
+ +A + ++ PN++++N LI G A ++ DEM + QP+ +
Sbjct: 163 DNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPS-V 221
Query: 120 ITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
+TYNS + LC+ + K +L++ +I K I+P+ T+ +L+ GLC G +A+++ D
Sbjct: 222 VTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFD 281
Query: 180 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
+ +G Y +++ L K G DEA L+ +M+ D + + +++ L
Sbjct: 282 MEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHL 336
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 98/218 (44%)
Query: 27 VNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTIT 86
+ + +A ++F+ +MG D SYS +I L K + + +L+ + +
Sbjct: 59 IEDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESL 118
Query: 87 YNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVI 146
+ LI K G V A ++ ++ I + N+ ++ L ++K +
Sbjct: 119 FMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAK 178
Query: 147 DKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFD 206
D ++P+ ++NIL+ G + A +VF ++ + + TYN++I LC+
Sbjct: 179 DMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMG 238
Query: 207 EALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+A +L+ M + +TF ++ L KGE ++A+
Sbjct: 239 KAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAK 276
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 127 bits (320), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 120/239 (50%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ G+KP V + L+ C VN AQ F G+ P +YSI++ G +++
Sbjct: 164 MVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRD 223
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ A + +M + + + YN+L+D LCK+G V +++ EM G D ++
Sbjct: 224 ASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAI 283
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
F+ A C V ++ ++ + P++ T+N ++ LCK ++ DA + ++ +KG
Sbjct: 284 FIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKG 343
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
N + WTYN+++ C + A L+S+M+ C+ D T+ ++ L G D+A
Sbjct: 344 ANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRA 402
Score = 127 bits (318), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 122/238 (51%), Gaps = 1/238 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+++ +++ YN+L+D C +V+ +F M +G+ PD S++I I+ C
Sbjct: 234 MLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGD 293
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V+ A +L +M ++PN T+N +I LCK KV +A+ LLDEM +G D TYNS
Sbjct: 294 VHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNS 353
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ C V++ L+ ++ PD TYN++L L + GR A E+++ + ++
Sbjct: 354 IMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERK 413
Query: 185 YNLNNWTYNTMINGLC-KEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
+ TY MI+GL K+G +EA M D G T E + + L G+ D
Sbjct: 414 FYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMD 471
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 110/229 (48%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G+ P+ TY+ L+ G+ + + + A+ VF+ M + D+L+Y+ +++ LCK V+
Sbjct: 203 GIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGG 262
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
+ ++M + + P+ ++ I C G V +A+++LD M ++ T+N +
Sbjct: 263 YKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKT 322
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
LCK VD L+ ++I KG PD TYN ++ C + A ++ + + +
Sbjct: 323 LCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPD 382
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK 237
TYN ++ L + G FD A + M + T+ +I L K
Sbjct: 383 RHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRK 431
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 107/220 (48%), Gaps = 1/220 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M M G+KP+ ++ + YC +V+ A V + M + + P+V +++ +I LC
Sbjct: 265 MFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLC 324
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + V++A LL +M + P+T TYNS++ C +V+ A +LL M D
Sbjct: 325 KNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRH 384
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLC-KCGRIKDAQEVFQD 179
TYN L L + D+ + + + ++ P + TY +++ GL K G++++A F+
Sbjct: 385 TYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEM 444
Query: 180 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 219
+ +G + T + N L G D L KME +
Sbjct: 445 MIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKMERSS 484
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 89/224 (39%), Gaps = 35/224 (15%)
Query: 20 LMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEK 79
+ Y N ++A FN M + G+ P V +++ LC K VN A +
Sbjct: 144 VFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFG 203
Query: 80 IIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGI 139
I+P+ TY+ L+ G + S A ++ DEM
Sbjct: 204 IVPSAKTYSILVRGWARIRDASGARKVFDEM----------------------------- 234
Query: 140 ALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGL 199
+++ D+ YN LLD LCK G + ++FQ++ G + +++ I+
Sbjct: 235 ------LERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAY 288
Query: 200 CKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
C G A ++ +M+ + + TF II L + + D A
Sbjct: 289 CDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDA 332
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 127 bits (319), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 118/237 (49%), Gaps = 4/237 (1%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
MM G+ +V TY LM G L N + + M GV P+ + Y+ +++ LCK
Sbjct: 173 MMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGK 232
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V A +L+ +M PN +T+N LI C K+ + LL++ G D++T
Sbjct: 233 VGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTK 288
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++ LC V + + ++++V KG + D+ N L+ G C G+++ AQ F ++ +KG
Sbjct: 289 VMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKG 348
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
Y N TYN +I G C G+ D AL + M+ + + TF T+I L G D
Sbjct: 349 YLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTD 405
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 119/222 (53%), Gaps = 4/222 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L +M GV PN V YN+L+ C +V +A+++ + M + P+ ++++I+I+ C
Sbjct: 204 LLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNILISAYC 259
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + +++ LL++ S +P+ +T +++ LC G+VS A E+L+ + +G D++
Sbjct: 260 NEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVV 319
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
N+ + C + ++ KG P++ TYN+L+ G C G + A + F D+
Sbjct: 320 ACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDM 379
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIH 222
N T+NT+I GL G D+ L ++ M+D+ +H
Sbjct: 380 KTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVH 421
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 123/239 (51%), Gaps = 8/239 (3%)
Query: 7 KQGVKPNVVTYNSLMDGYCLVNE-VNKAQAVFNT-MTQMGVFPDVLSYSIMINGLCKMKM 64
K G+KP++ +NS++D LV E ++ A+ F M G+ DV +Y I++ GL
Sbjct: 140 KFGIKPSLKVFNSILD--VLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNR 197
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ + LL+ M + + PN + YN+L+ LCK GKV A L+ EM +P D+ T+N
Sbjct: 198 IGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK---EPNDV-TFNI 253
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ A C + + + L++K G PD+ T +++ LC GR+ +A EV + + KG
Sbjct: 254 LISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKG 313
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
++ NT++ G C G A +ME G + + T+ +I+ + G D A
Sbjct: 314 GKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSA 372
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 128/271 (47%), Gaps = 35/271 (12%)
Query: 8 QGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNE 67
+G K +VV N+L+ GYC + ++ AQ F M + G P+V +Y+++I G C + M++
Sbjct: 312 KGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDS 371
Query: 68 ALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMH-------VRGQPADII 120
AL+ M ++ I N T+N+LI GL G+ + ++L+ M R P + +
Sbjct: 372 ALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCV 431
Query: 121 TY-----NSFLDAL--------CKGHHVDKGIALIK---------------KVIDKGIQP 152
Y N + DAL VD+ LI ++I +G P
Sbjct: 432 IYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVP 491
Query: 153 DMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLM 212
+ + L+ + G+I+++ E+ D+ +GY + T+N +I G CK+ + +
Sbjct: 492 SIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFV 551
Query: 213 SKMEDNGCIHDPITFETIISALFEKGENDKA 243
M + GC+ D ++ ++ L KG+ KA
Sbjct: 552 EDMAERGCVPDTESYNPLLEELCVKGDIQKA 582
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 106/216 (49%), Gaps = 6/216 (2%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
+M + +PN VT+N L+ YC ++ ++ + +G PDV++ + ++ LC
Sbjct: 239 LMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGR 298
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V+EAL +L+++ S+ + + N+L+ G C GK+ A EM +G ++ TYN
Sbjct: 299 VSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNL 358
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK- 183
+ C +D + + I+ + T+N L+ GL GR D ++ + +
Sbjct: 359 LIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSD 418
Query: 184 ---GYNLNNWTYNTMINGLCKEGLFDEALTLMSKME 216
G ++ YN +I G KE +++AL + KME
Sbjct: 419 TVHGARID--PYNCVIYGFYKENRWEDALEFLLKME 452
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 116/268 (43%), Gaps = 35/268 (13%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M ++G PNV TYN L+ GYC V ++ A FN M + + +++ +I GL
Sbjct: 344 MERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGR 403
Query: 65 VNEALNLLKQMHS-----------------------------------EKIIPNTITYNS 89
++ L +L+ M EK+ P + +
Sbjct: 404 TDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSF 463
Query: 90 LIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKG 149
+ LC+ G + + D+M G II + + + +++ + LI ++ +G
Sbjct: 464 KLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRG 523
Query: 150 IQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEAL 209
P T+N ++ G CK ++ + + +D+ ++G + +YN ++ LC +G +A
Sbjct: 524 YLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAW 583
Query: 210 TLMSKMEDNGCIHDPITFETIISALFEK 237
L S+M + + DP + +++ L +K
Sbjct: 584 LLFSRMVEKSIVPDPSMWSSLMFCLSQK 611
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 3/167 (1%)
Query: 80 IIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVR-GQPADIITYNSFLDALCKGHHVDKG 138
I + TY +L LC + ++LLDEM G P D + + + + + +
Sbjct: 72 FIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRV 131
Query: 139 IALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVF-QDLFKKGYNLNNWTYNTMIN 197
I+++ V GI+P + +N +LD L K I A+E F + + G + + +TY ++
Sbjct: 132 ISVVDLVSKFGIKPSLKVFNSILDVLVK-EDIDIAREFFTRKMMASGIHGDVYTYGILMK 190
Query: 198 GLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
GL + L+ M+ +G + + + T++ AL + G+ +A
Sbjct: 191 GLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRAR 237
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 127 bits (318), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 128/235 (54%), Gaps = 1/235 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L +M+ G++P+ VT + + C V++A+ + +T+ PD +Y+ ++ LC
Sbjct: 146 VLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLC 205
Query: 61 KMKMVNEALNLLKQMHSE-KIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADI 119
K K ++ + +M + + P+ +++ LID +C + + A L+ ++ G D
Sbjct: 206 KCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDC 265
Query: 120 ITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
YN+ + C + + + KK+ ++G++PD TYN L+ GL K GR+++A+ +
Sbjct: 266 FLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKT 325
Query: 180 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
+ GY + TY +++NG+C++G AL+L+ +ME GC + T+ T++ L
Sbjct: 326 MVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGL 380
Score = 124 bits (312), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 128/240 (53%), Gaps = 1/240 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQ-MGVFPDVLSYSIMINGL 59
++ + ++ P+ TYN L+ C +++ + M V PD++S++I+I+ +
Sbjct: 181 LMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNV 240
Query: 60 CKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADI 119
C K + EA+ L+ ++ + P+ YN+++ G C K S A + +M G D
Sbjct: 241 CNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQ 300
Query: 120 ITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
ITYN+ + L K V++ +K ++D G +PD TY L++G+C+ G A + ++
Sbjct: 301 ITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEE 360
Query: 180 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
+ +G N+ TYNT+++GLCK L D+ + L M+ +G + + T++ +L + G+
Sbjct: 361 MEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGK 420
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 115/225 (51%)
Query: 10 VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEAL 69
VKP++V++ L+D C + +A + + + G PD Y+ ++ G C + +EA+
Sbjct: 226 VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAV 285
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
+ K+M E + P+ ITYN+LI GL K G+V A L M G D TY S ++ +
Sbjct: 286 GVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGM 345
Query: 130 CKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 189
C+ ++L++++ +G P+ CTYN LL GLCK + E+++ + G L +
Sbjct: 346 CRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLES 405
Query: 190 WTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
Y T++ L K G EA + D+ + D + T+ + L
Sbjct: 406 NGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTLETTL 450
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 98/169 (57%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G KP+ YN++M G+C +++ ++A V+ M + GV PD ++Y+ +I GL K V EA
Sbjct: 260 GFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEA 319
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
LK M P+T TY SL++G+C+ G+ A LL+EM RG + TYN+ L
Sbjct: 320 RMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHG 379
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVF 177
LCK +DKG+ L + + G++ + Y L+ L K G++ +A EVF
Sbjct: 380 LCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVF 428
Score = 97.1 bits (240), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 118/236 (50%), Gaps = 11/236 (4%)
Query: 17 YNSLMDGYCLVNEVNKAQAVFNTM--TQMGVFPDVLSYSIMINGLCK-----MKMVNEAL 69
+NS++ Y + VN +F + +Q P ++ I+++ C+ + V+ L
Sbjct: 88 HNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVL 147
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
NL M + + P+ +T + + LC+TG+V A +L+ E+ + P D TYN L L
Sbjct: 148 NL---MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHL 204
Query: 130 CKGHHVDKGIALIKKVIDK-GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
CK + + ++ D ++PD+ ++ IL+D +C +++A + L G+ +
Sbjct: 205 CKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPD 264
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ YNT++ G C EA+ + KM++ G D IT+ T+I L + G ++A
Sbjct: 265 CFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEAR 320
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M ++GV+P+ +TYN+L+ G V +A+ TM G PD +Y+ ++NG+C+
Sbjct: 291 MKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGE 350
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
AL+LL++M + PN TYN+L+ GLCK + EL + M G + Y +
Sbjct: 351 SLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYAT 410
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNIL 160
+ +L K V + + +D D Y+ L
Sbjct: 411 LVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 77/151 (50%), Gaps = 10/151 (6%)
Query: 2 LAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCK 61
L M+ G +P+ TY SLM+G C E A ++ M G P+ +Y+ +++GLCK
Sbjct: 323 LKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCK 382
Query: 62 MKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 121
+++++ + L + M S + + Y +L+ L K+GKV+ A+E+ D +D
Sbjct: 383 ARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASA 442
Query: 122 YNSFLDALCKGHHVDKGIALIKKVIDKGIQP 152
Y++ ++ + +KK ++G+ P
Sbjct: 443 YST----------LETTLKWLKKAKEQGLVP 463
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 110/209 (52%), Gaps = 1/209 (0%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
GVK + + NSLMD N + A VF + + PD +++I+I+G CK + ++A
Sbjct: 234 GVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFD-TIKPDARTFNILIHGFCKARKFDDA 292
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
++ M + P+ +TY S ++ CK G E+L+EM G +++TY + +
Sbjct: 293 RAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHS 352
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
L K V + + + +K+ + G PD Y+ L+ L K GR KDA E+F+D+ +G +
Sbjct: 353 LGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRD 412
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMED 217
YNTMI+ + AL L+ +MED
Sbjct: 413 VLVYNTMISAALHHSRDEMALRLLKRMED 441
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 126/266 (47%), Gaps = 40/266 (15%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M+ +M P+VVTY S ++ YC + + + M + G P+V++Y+I+++ L
Sbjct: 295 MMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLG 354
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K K V EAL + ++M + +P+ Y+SLI L KTG+ +A E+ ++M +G D++
Sbjct: 355 KSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVL 414
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDK-------------------------------- 148
YN+ + A + + L+K++ D+
Sbjct: 415 VYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILL 474
Query: 149 ------GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKE 202
+ D+ TY +L+ GLC G++++A F++ +KG + T +++ L K+
Sbjct: 475 HHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEKK 534
Query: 203 GLFDEALTLMSKMEDNGCI--HDPIT 226
+ + L + S ++ I H P++
Sbjct: 535 NMAEAKLKIQSLVQSKTMIDSHSPLS 560
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 115/229 (50%), Gaps = 2/229 (0%)
Query: 16 TYNSLMDGYCLVNEVNKAQAVFNTMTQ-MGVFPDVLSYSIMINGLCKMKMVNEALNLLKQ 74
T + +M + NKA F M + GV D ++ + +++ L K + A + +
Sbjct: 205 TMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLK 264
Query: 75 MHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 134
+ + I P+ T+N LI G CK K +A ++D M V D++TY SF++A CK
Sbjct: 265 LF-DTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGD 323
Query: 135 VDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 194
+ +++++ + G P++ TY I++ L K ++ +A V++ + + G + Y++
Sbjct: 324 FRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSS 383
Query: 195 MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+I+ L K G F +A + M + G D + + T+ISA ++ A
Sbjct: 384 LIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMA 432
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 39/187 (20%)
Query: 86 TYNSLIDGLCKTGKVSNAWELLDEMH---------------------------------- 111
TYN+++D L K WEL++EM+
Sbjct: 168 TYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFL 227
Query: 112 ----VRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKC 167
G D I NS +DAL K + ++ + K+ D I+PD T+NIL+ G CK
Sbjct: 228 EMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFD-TIKPDARTFNILIHGFCKA 286
Query: 168 GRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITF 227
+ DA+ + + + + TY + + CKEG F ++ +M +NGC + +T+
Sbjct: 287 RKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTY 346
Query: 228 ETIISAL 234
++ +L
Sbjct: 347 TIVMHSL 353
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 126/240 (52%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M VKP VVTY +L++GYC + V A V M + + + ++ +I+GL +
Sbjct: 276 MKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGR 335
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++EAL ++++ + P +TYNSL+ CK G + A ++L M RG TYN
Sbjct: 336 LSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNH 395
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
F K + ++G+ L K+I+ G PD TY+++L LC+ G++ A +V +++ +G
Sbjct: 396 FFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRG 455
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ + T +I+ LC+ + +EA G I ITF+ I + L KG +D A+
Sbjct: 456 IDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAK 515
Score = 113 bits (283), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 119/223 (53%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNL 71
P+V +N L++G+ ++ +A+ ++ M M V P V++Y +I G C+M+ V A+ +
Sbjct: 248 PSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEV 307
Query: 72 LKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 131
L++M ++ N + +N +IDGL + G++S A +++ V I+TYNS + CK
Sbjct: 308 LEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCK 367
Query: 132 GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT 191
+ ++K ++ +G+ P TYN K + ++ ++ L + G++ + T
Sbjct: 368 AGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLT 427
Query: 192 YNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
Y+ ++ LC++G A+ + +M++ G D +T +I L
Sbjct: 428 YHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLL 470
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 109/224 (48%), Gaps = 5/224 (2%)
Query: 20 LMDGYCLVNEVNKA----QAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQM 75
L+D C V +A + + TM V P V ++I++NG + + + +A L ++M
Sbjct: 218 LLDALCKEGHVREASMYLERIGGTMDSNWV-PSVRIFNILLNGWFRSRKLKQAEKLWEEM 276
Query: 76 HSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHV 135
+ + P +TY +LI+G C+ +V A E+L+EM + + + +N +D L + +
Sbjct: 277 KAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRL 336
Query: 136 DKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTM 195
+ + ++++ P + TYN L+ CK G + A ++ + + +G + TYN
Sbjct: 337 SEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHF 396
Query: 196 INGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
K +E + L K+ + G D +T+ I+ L E G+
Sbjct: 397 FKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGK 440
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 124 bits (312), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 124/241 (51%), Gaps = 1/241 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
+ + G+KP YN+L+ GY + A+++ + M + GV PD +YS++I+
Sbjct: 330 LRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGR 389
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
A +LK+M + + PN+ ++ L+ G G+ +++L EM G D YN
Sbjct: 390 WESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNV 449
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D K + +D + +++ +GI+PD T+N L+D CK GR A+E+F+ + ++G
Sbjct: 450 VIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRG 509
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE-NDKA 243
TYN MIN + +D+ L+ KM+ G + + +T T++ + G ND
Sbjct: 510 CLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAI 569
Query: 244 E 244
E
Sbjct: 570 E 570
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 115/234 (49%)
Query: 10 VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEAL 69
V+PN ++ L+ G+ E K V M +GV PD Y+++I+ K ++ A+
Sbjct: 405 VQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAM 464
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
+M SE I P+ +T+N+LID CK G+ A E+ + M RG TYN +++
Sbjct: 465 TTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSY 524
Query: 130 CKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 189
D L+ K+ +GI P++ T+ L+D K GR DA E +++ G ++
Sbjct: 525 GDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSS 584
Query: 190 WTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
YN +IN + GL ++A+ M +G + ++I+A E + +A
Sbjct: 585 TMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEA 638
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 117/230 (50%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ +G++P+ VT+N+L+D +C A+ +F M + G P +Y+IMIN +
Sbjct: 470 MLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQER 529
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++ LL +M S+ I+PN +T+ +L+D K+G+ ++A E L+EM G YN+
Sbjct: 530 WDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNA 589
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++A + ++ + + + G++P + N L++ + R +A V Q + + G
Sbjct: 590 LINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENG 649
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
+ TY T++ L + F + + +M +GC D + SAL
Sbjct: 650 VKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSAL 699
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 115/238 (48%), Gaps = 4/238 (1%)
Query: 7 KQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVN 66
KQ + P +TYN+L+ N++ KA + M Q G D ++YS++I L + ++
Sbjct: 192 KQTLTP--LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKID 249
Query: 67 EA--LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
L L K++ +K+ + N +I G K+G S A +LL G A T S
Sbjct: 250 SVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVS 309
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ AL + AL +++ GI+P YN LL G K G +KDA+ + ++ K+G
Sbjct: 310 IISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRG 369
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 242
+ + TY+ +I+ G ++ A ++ +ME + F +++ ++GE K
Sbjct: 370 VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQK 427
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 112/234 (47%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M GVKP+ YN ++D + N ++ A F+ M G+ PD ++++ +I+ C
Sbjct: 431 VLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHC 490
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K A + + M +P TYN +I+ + + LL +M +G +++
Sbjct: 491 KHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVV 550
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
T+ + +D K + I ++++ G++P YN L++ + G + A F+ +
Sbjct: 551 THTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVM 610
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
G + N++IN ++ EA ++ M++NG D +T+ T++ AL
Sbjct: 611 TSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKAL 664
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 104/233 (44%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L + G+ T S++ +A+A+F + Q G+ P +Y+ ++ G
Sbjct: 291 LLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYV 350
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + +A +++ +M + P+ TY+ LID G+ +A +L EM +
Sbjct: 351 KTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSF 410
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
++ L K ++K++ G++PD YN+++D K + A F +
Sbjct: 411 VFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRM 470
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
+G + T+NT+I+ CK G A + ME GC+ T+ +I++
Sbjct: 471 LSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINS 523
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 102/232 (43%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
+V N ++ G+ + +KA + G+ + +I+ L EA L
Sbjct: 268 DVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALF 327
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 132
+++ I P T YN+L+ G KTG + +A ++ EM RG D TY+ +DA
Sbjct: 328 EELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNA 387
Query: 133 HHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 192
+ ++K++ +QP+ ++ LL G G + +V +++ G + Y
Sbjct: 388 GRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFY 447
Query: 193 NTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
N +I+ K D A+T +M G D +T+ T+I + G + AE
Sbjct: 448 NVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAE 499
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M QG+ PNVVT+ +L+D Y N A M +G+ P Y+ +IN
Sbjct: 536 LLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYA 595
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + +A+N + M S+ + P+ + NSLI+ + + + A+ +L M G D++
Sbjct: 596 QRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVV 655
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGL 164
TY + + AL + K + +++I G +PD ++L L
Sbjct: 656 TYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSAL 699
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 93/236 (39%), Gaps = 42/236 (17%)
Query: 46 FPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWE 105
F L YSI+I+ L + + + EA L S+K +TYN+LI + + A
Sbjct: 164 FSYELLYSILIHALGRSEKLYEAFLL-----SQKQTLTPLTYNALIGACARNNDIEKALN 218
Query: 106 LLDEMHVRGQPADIITYNSFLDALCKGHHVD----------------------------- 136
L+ +M G +D + Y+ + +L + + +D
Sbjct: 219 LIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMG 278
Query: 137 --------KGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
K + L+ G+ T ++ L GR +A+ +F++L + G
Sbjct: 279 FAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPR 338
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
YN ++ G K G +A +++S+ME G D T+ +I A G + A
Sbjct: 339 TRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESAR 394
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 124 bits (312), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 126/233 (54%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M+ G P++VTYNSL+ Y +++A + N M + G PDV +Y+ +++G
Sbjct: 336 VLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFE 395
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ V A+++ ++M + PN T+N+ I GK + ++ DE++V G DI+
Sbjct: 396 RAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIV 455
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
T+N+ L + + + K++ G P+ T+N L+ +CG + A V++ +
Sbjct: 456 TWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRM 515
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
G + TYNT++ L + G+++++ ++++MED C + +T+ +++ A
Sbjct: 516 LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 126/240 (52%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M G + VTYN+L+D Y + +A V N M G P +++Y+ +I+ + M
Sbjct: 305 MKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGM 364
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++EA+ L QM + P+ TY +L+ G + GKV +A + +EM G +I T+N+
Sbjct: 365 LDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNA 424
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
F+ + + + ++ G+ PD+ T+N LL + G + VF+++ + G
Sbjct: 425 FIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAG 484
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ T+NT+I+ + G F++A+T+ +M D G D T+ T+++AL G +++E
Sbjct: 485 FVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSE 544
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 125/241 (51%), Gaps = 3/241 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M + + G +V +Y SL+ + +A VF M + G P +++Y++++N
Sbjct: 195 MFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFG 254
Query: 61 KMKMV-NEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKV-SNAWELLDEMHVRGQPAD 118
KM N+ +L+++M S+ I P+ TYN+LI CK G + A ++ +EM G D
Sbjct: 255 KMGTPWNKITSLVEKMKSDGIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSYD 313
Query: 119 IITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 178
+TYN+ LD K H + + ++ +++ G P + TYN L+ + G + +A E+
Sbjct: 314 KVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKN 373
Query: 179 DLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
+ +KG + +TY T+++G + G + A+++ +M + GC + TF I +G
Sbjct: 374 QMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRG 433
Query: 239 E 239
+
Sbjct: 434 K 434
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 122/235 (51%), Gaps = 1/235 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYC-LVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
M + G KP ++TYN +++ + + NK ++ M G+ PD +Y+ +I +
Sbjct: 234 MEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGS 293
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
+ EA + ++M + + +TYN+L+D K+ + A ++L+EM + G I+TYN
Sbjct: 294 LHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYN 353
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
S + A + +D+ + L ++ +KG +PD+ TY LL G + G+++ A +F+++
Sbjct: 354 SLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNA 413
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
G N T+N I G F E + + ++ G D +T+ T+++ + G
Sbjct: 414 GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNG 468
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 110/219 (50%), Gaps = 7/219 (3%)
Query: 29 EVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYN 88
V+ A +FN + + G DV SY+ +I+ EA+N+ K+M + P ITYN
Sbjct: 188 RVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYN 247
Query: 89 SLIDGLCKTGKVSNAW----ELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKK 144
+++ GK+ W L+++M G D TYN+ + +G + + ++
Sbjct: 248 VILNVF---GKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEE 304
Query: 145 VIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGL 204
+ G D TYN LLD K R K+A +V ++ G++ + TYN++I+ ++G+
Sbjct: 305 MKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGM 364
Query: 205 FDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
DEA+ L ++M + G D T+ T++S G+ + A
Sbjct: 365 LDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESA 403
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 116/244 (47%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+LA M KPN +TY SL+ Y E+ ++ + + P + ++
Sbjct: 546 VLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCS 605
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K ++ EA ++ P+ T NS++ + V+ A +LD M RG +
Sbjct: 606 KCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMA 665
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYNS + + K ++++++ KGI+PD+ +YN ++ C+ R++DA +F ++
Sbjct: 666 TYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEM 725
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
G + TYNT I + +F+EA+ ++ M +GC + T+ +I+ +
Sbjct: 726 RNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRK 785
Query: 241 DKAE 244
D+A+
Sbjct: 786 DEAK 789
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 97/179 (54%)
Query: 2 LAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCK 61
+ + ++G P++ T NS++ Y V KA V + M + G P + +Y+ ++ +
Sbjct: 617 FSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSR 676
Query: 62 MKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 121
++ +L+++ ++ I P+ I+YN++I C+ ++ +A + EM G D+IT
Sbjct: 677 SADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVIT 736
Query: 122 YNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
YN+F+ + ++ I +++ +I G +P+ TYN ++DG CK R +A+ +DL
Sbjct: 737 YNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 109/264 (41%), Gaps = 35/264 (13%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M + G P T+N+L+ Y +A V+ M GV PD+ +Y+ ++ L + M
Sbjct: 480 MKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGM 539
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKV------------------------ 100
++ +L +M + PN +TY SL+ ++
Sbjct: 540 WEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKT 599
Query: 101 -----------SNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKG 149
A E+ RG DI T NS + + V K ++ + ++G
Sbjct: 600 LVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERG 659
Query: 150 IQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEAL 209
P M TYN L+ + ++E+ +++ KG + +YNT+I C+ +A
Sbjct: 660 FTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDAS 719
Query: 210 TLMSKMEDNGCIHDPITFETIISA 233
+ S+M ++G + D IT+ T I +
Sbjct: 720 RIFSEMRNSGIVPDVITYNTFIGS 743
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 100/193 (51%), Gaps = 3/193 (1%)
Query: 53 SIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHV 112
+I+I+ L K V+ A N+ + + + +Y SLI +G+ A + +M
Sbjct: 177 AIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEE 236
Query: 113 RGQPADIITYNSFLDALCK-GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRI- 170
G +ITYN L+ K G +K +L++K+ GI PD TYN L+ CK G +
Sbjct: 237 DGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLIT-CCKRGSLH 295
Query: 171 KDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETI 230
++A +VF+++ G++ + TYN +++ K EA+ ++++M NG +T+ ++
Sbjct: 296 QEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSL 355
Query: 231 ISALFEKGENDKA 243
ISA G D+A
Sbjct: 356 ISAYARDGMLDEA 368
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 117/237 (49%), Gaps = 7/237 (2%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G+ P++VT+N+L+ + ++ VF M + G P+ +++ +I+ + +A
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMH-VRGQPADIITYNSFLD 127
+ + ++M + P+ TYN+++ L + G + ++L EM R +P + +TY S L
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE-LTYCSLLH 567
Query: 128 ALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
A G + +L ++V I+P L+ KC + +A+ F +L ++G++
Sbjct: 568 AYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSP 627
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII-----SALFEKGE 239
+ T N+M++ + + +A ++ M++ G T+ +++ SA F K E
Sbjct: 628 DITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSE 684
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 62/111 (55%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L ++ +G+KP++++YN+++ YC + A +F+ M G+ PDV++Y+ I
Sbjct: 686 ILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYA 745
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMH 111
M EA+ +++ M PN TYNS++DG CK + A ++++
Sbjct: 746 ADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLR 796
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 124 bits (310), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 113/234 (48%)
Query: 10 VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEAL 69
++PN+ Y+S + C ++ +A +F + ++G+ PD + Y+ MI+G C + ++A
Sbjct: 369 LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAF 428
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
+ P+ T LI + G +S+A + M G D++TYN+ +
Sbjct: 429 QYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGY 488
Query: 130 CKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 189
K H ++K LI ++ GI PD+ TYNIL+ + G I +A E+ +L ++G+ +
Sbjct: 489 GKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPST 548
Query: 190 WTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ +I G K G F EA L M D D +T ++ + +KA
Sbjct: 549 LAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKA 602
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 108/195 (55%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M +G+K +VVTYN+LM GY +++NK + + M G+ PDV +Y+I+I+ +
Sbjct: 469 MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGY 528
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++EA ++ ++ +P+T+ + +I G K G A+ L M D++T ++
Sbjct: 529 IDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSA 588
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
L CK ++K I L K++D G++PD+ YN L+ G C G I+ A E+ + ++G
Sbjct: 589 LLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRG 648
Query: 185 YNLNNWTYNTMINGL 199
N T++ ++ GL
Sbjct: 649 MLPNESTHHALVLGL 663
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 118/243 (48%), Gaps = 3/243 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M G++P++V + +D C + +A +V + G+ D +S S +I+G C
Sbjct: 293 LLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFC 352
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K+ EA+ L+ HS ++ PN Y+S + +C TG + A + E+ G D +
Sbjct: 353 KVGKPEEAIKLI---HSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCV 409
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
Y + +D C DK ++ G P + T IL+ + G I DA+ VF+++
Sbjct: 410 CYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNM 469
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+G L+ TYN +++G K ++ L+ +M G D T+ +I ++ +G
Sbjct: 470 KTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYI 529
Query: 241 DKA 243
D+A
Sbjct: 530 DEA 532
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 125/242 (51%), Gaps = 6/242 (2%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
+ + G+ P+ V Y +++DGYC + +KA F + + G P + + +I+I +
Sbjct: 399 IFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGS 458
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+++A ++ + M +E + + +TYN+L+ G KT +++ +EL+DEM G D+ TYN
Sbjct: 459 ISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNI 518
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ ++ ++D+ +I ++I +G P + ++ G K G D QE F F
Sbjct: 519 LIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRG---DFQEAFILWFYMA 575
Query: 185 ---YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
+ T + +++G CK ++A+ L +K+ D G D + + T+I G+ +
Sbjct: 576 DLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIE 635
Query: 242 KA 243
KA
Sbjct: 636 KA 637
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 100/236 (42%), Gaps = 3/236 (1%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G+ P+ SL+ V+ + A+ M G + S+ I C ++
Sbjct: 231 GIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKG 290
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
LL M I P+ + + ID LCK G + A +L ++ + G D ++ +S +D
Sbjct: 291 WELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDG 350
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
CK ++ I LI ++P++ Y+ L +C G + A +FQ++F+ G +
Sbjct: 351 FCKVGKPEEAIKLIHSF---RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPD 407
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
Y TMI+G C G D+A + +G T +I A G AE
Sbjct: 408 CVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAE 463
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 15/216 (6%)
Query: 36 VFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLC 95
+F T V V +SI+I+ + + VN AL L ++ I P+ SL+ +
Sbjct: 190 LFETRIDRRVLETV--FSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEIL 247
Query: 96 KTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMC 155
+ + A E ++ M RG+ + + F+ C + DKG L+ + GI+PD+
Sbjct: 248 RVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIV 307
Query: 156 TYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLM--- 212
+ + +D LCK G +K+A V L G + ++ + +++I+G CK G +EA+ L+
Sbjct: 308 AFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF 367
Query: 213 ---------SKMEDNGC-IHDPITFETIISALFEKG 238
S N C D + TI +FE G
Sbjct: 368 RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELG 403
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 71/129 (55%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+++ ++++G P+ + + ++ G+ + +A ++ M + + PDV++ S +++G C
Sbjct: 535 IISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYC 594
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + + +A+ L ++ + P+ + YN+LI G C G + A EL+ M RG +
Sbjct: 595 KAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNES 654
Query: 121 TYNSFLDAL 129
T+++ + L
Sbjct: 655 THHALVLGL 663
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
++ G+KP+VV YN+L+ GYC V ++ KA + M Q G+ P+ ++ ++ GL +
Sbjct: 609 LLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRF 668
Query: 65 VNE 67
VN
Sbjct: 669 VNS 671
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 124 bits (310), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 113/234 (48%)
Query: 10 VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEAL 69
++PN+ Y+S + C ++ +A +F + ++G+ PD + Y+ MI+G C + ++A
Sbjct: 369 LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAF 428
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
+ P+ T LI + G +S+A + M G D++TYN+ +
Sbjct: 429 QYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGY 488
Query: 130 CKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 189
K H ++K LI ++ GI PD+ TYNIL+ + G I +A E+ +L ++G+ +
Sbjct: 489 GKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPST 548
Query: 190 WTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ +I G K G F EA L M D D +T ++ + +KA
Sbjct: 549 LAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKA 602
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 108/195 (55%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M +G+K +VVTYN+LM GY +++NK + + M G+ PDV +Y+I+I+ +
Sbjct: 469 MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGY 528
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++EA ++ ++ +P+T+ + +I G K G A+ L M D++T ++
Sbjct: 529 IDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSA 588
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
L CK ++K I L K++D G++PD+ YN L+ G C G I+ A E+ + ++G
Sbjct: 589 LLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRG 648
Query: 185 YNLNNWTYNTMINGL 199
N T++ ++ GL
Sbjct: 649 MLPNESTHHALVLGL 663
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 118/243 (48%), Gaps = 3/243 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M G++P++V + +D C + +A +V + G+ D +S S +I+G C
Sbjct: 293 LLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFC 352
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K+ EA+ L+ HS ++ PN Y+S + +C TG + A + E+ G D +
Sbjct: 353 KVGKPEEAIKLI---HSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCV 409
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
Y + +D C DK ++ G P + T IL+ + G I DA+ VF+++
Sbjct: 410 CYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNM 469
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+G L+ TYN +++G K ++ L+ +M G D T+ +I ++ +G
Sbjct: 470 KTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYI 529
Query: 241 DKA 243
D+A
Sbjct: 530 DEA 532
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 125/242 (51%), Gaps = 6/242 (2%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
+ + G+ P+ V Y +++DGYC + +KA F + + G P + + +I+I +
Sbjct: 399 IFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGS 458
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+++A ++ + M +E + + +TYN+L+ G KT +++ +EL+DEM G D+ TYN
Sbjct: 459 ISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNI 518
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ ++ ++D+ +I ++I +G P + ++ G K G D QE F F
Sbjct: 519 LIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRG---DFQEAFILWFYMA 575
Query: 185 ---YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
+ T + +++G CK ++A+ L +K+ D G D + + T+I G+ +
Sbjct: 576 DLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIE 635
Query: 242 KA 243
KA
Sbjct: 636 KA 637
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 100/236 (42%), Gaps = 3/236 (1%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G+ P+ SL+ V+ + A+ M G + S+ I C ++
Sbjct: 231 GIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKG 290
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
LL M I P+ + + ID LCK G + A +L ++ + G D ++ +S +D
Sbjct: 291 WELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDG 350
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
CK ++ I LI ++P++ Y+ L +C G + A +FQ++F+ G +
Sbjct: 351 FCKVGKPEEAIKLIHSF---RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPD 407
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
Y TMI+G C G D+A + +G T +I A G AE
Sbjct: 408 CVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAE 463
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 15/216 (6%)
Query: 36 VFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLC 95
+F T V V +SI+I+ + + VN AL L ++ I P+ SL+ +
Sbjct: 190 LFETRIDRRVLETV--FSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEIL 247
Query: 96 KTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMC 155
+ + A E ++ M RG+ + + F+ C + DKG L+ + GI+PD+
Sbjct: 248 RVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIV 307
Query: 156 TYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLM--- 212
+ + +D LCK G +K+A V L G + ++ + +++I+G CK G +EA+ L+
Sbjct: 308 AFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF 367
Query: 213 ---------SKMEDNGC-IHDPITFETIISALFEKG 238
S N C D + TI +FE G
Sbjct: 368 RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELG 403
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 71/129 (55%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+++ ++++G P+ + + ++ G+ + +A ++ M + + PDV++ S +++G C
Sbjct: 535 IISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYC 594
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + + +A+ L ++ + P+ + YN+LI G C G + A EL+ M RG +
Sbjct: 595 KAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNES 654
Query: 121 TYNSFLDAL 129
T+++ + L
Sbjct: 655 THHALVLGL 663
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
++ G+KP+VV YN+L+ GYC V ++ KA + M Q G+ P+ ++ ++ GL +
Sbjct: 609 LLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRF 668
Query: 65 VNE 67
VN
Sbjct: 669 VNS 671
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 126/240 (52%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M + G + V+YN+L+ G+C ++ A + N M + G+ P+V++++ +I+G C
Sbjct: 260 LLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFC 319
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + EA + +M + + PNT+TYN+LI+G + G A+ ++M G DI+
Sbjct: 320 RAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDIL 379
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN+ + LCK K +K++ + + P+ T++ L+ G C E+++ +
Sbjct: 380 TYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSM 439
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+ G + N T+N +++ C+ FD A ++ +M D T + + L +G++
Sbjct: 440 IRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKD 499
Score = 120 bits (301), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 118/239 (49%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M + + PN T N +M GYC +++K + M ++G +SY+ +I G C+ +
Sbjct: 229 MRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGL 288
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++ AL L M + PN +T+N+LI G C+ K+ A ++ EM + +TYN+
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++ + + + ++ GIQ D+ TYN L+ GLCK + + A + ++L K+
Sbjct: 349 LINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKEN 408
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
N+ T++ +I G C D L M +GC + TF ++SA + D A
Sbjct: 409 LVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGA 467
Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 111/213 (52%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
+M K G++PNVVT+N+L+ G+C ++ +A VF M + V P+ ++Y+ +ING +
Sbjct: 298 MMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQG 357
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
A + M I + +TYN+LI GLCK K A + + E+ + T++
Sbjct: 358 DHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFS 417
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ + C + D+G L K +I G P+ T+N+L+ C+ A +V +++ ++
Sbjct: 418 ALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRR 477
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKME 216
L++ T + + NGL +G L+ +ME
Sbjct: 478 SIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEME 510
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 112/227 (49%)
Query: 17 YNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMH 76
++SL + + + A F M G P V S + ++ L V+ AL ++M
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 77 SEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVD 136
KI PN T N ++ G C++GK+ ELL +M G A ++YN+ + C+ +
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 137 KGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMI 196
+ L + G+QP++ T+N L+ G C+ ++++A +VF ++ N TYNT+I
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 197 NGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
NG ++G + A M NG D +T+ +I L ++ + KA
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKA 397
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 111/227 (48%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M G P V + N+ M V+ A + M + + P+ + +++++G C+
Sbjct: 194 MKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGK 253
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+++ + LL+ M ++YN+LI G C+ G +S+A +L + M G +++T+N+
Sbjct: 254 LDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNT 313
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ C+ + + + ++ + P+ TYN L++G + G + A ++D+ G
Sbjct: 314 LIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNG 373
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 231
+ TYN +I GLCK+ +A + +++ + + TF +I
Sbjct: 374 IQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALI 420
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 91/176 (51%)
Query: 10 VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEAL 69
V PN VTYN+L++GY + A + M G+ D+L+Y+ +I GLCK +A
Sbjct: 339 VAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAA 398
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
+K++ E ++PN+ T+++LI G C +EL M G + T+N + A
Sbjct: 399 QFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAF 458
Query: 130 CKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 185
C+ D ++++++ + I D T + + +GL G+ + +++ Q++ K +
Sbjct: 459 CRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKF 514
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 126/240 (52%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M + G + V+YN+L+ G+C ++ A + N M + G+ P+V++++ +I+G C
Sbjct: 260 LLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFC 319
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + EA + +M + + PNT+TYN+LI+G + G A+ ++M G DI+
Sbjct: 320 RAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDIL 379
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN+ + LCK K +K++ + + P+ T++ L+ G C E+++ +
Sbjct: 380 TYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSM 439
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+ G + N T+N +++ C+ FD A ++ +M D T + + L +G++
Sbjct: 440 IRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKD 499
Score = 120 bits (301), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 118/239 (49%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M + + PN T N +M GYC +++K + M ++G +SY+ +I G C+ +
Sbjct: 229 MRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGL 288
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++ AL L M + PN +T+N+LI G C+ K+ A ++ EM + +TYN+
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++ + + + ++ GIQ D+ TYN L+ GLCK + + A + ++L K+
Sbjct: 349 LINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKEN 408
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
N+ T++ +I G C D L M +GC + TF ++SA + D A
Sbjct: 409 LVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGA 467
Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 111/213 (52%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
+M K G++PNVVT+N+L+ G+C ++ +A VF M + V P+ ++Y+ +ING +
Sbjct: 298 MMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQG 357
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
A + M I + +TYN+LI GLCK K A + + E+ + T++
Sbjct: 358 DHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFS 417
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ + C + D+G L K +I G P+ T+N+L+ C+ A +V +++ ++
Sbjct: 418 ALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRR 477
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKME 216
L++ T + + NGL +G L+ +ME
Sbjct: 478 SIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEME 510
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 112/227 (49%)
Query: 17 YNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMH 76
++SL + + + A F M G P V S + ++ L V+ AL ++M
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 77 SEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVD 136
KI PN T N ++ G C++GK+ ELL +M G A ++YN+ + C+ +
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 137 KGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMI 196
+ L + G+QP++ T+N L+ G C+ ++++A +VF ++ N TYNT+I
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 197 NGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
NG ++G + A M NG D +T+ +I L ++ + KA
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKA 397
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 111/227 (48%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M G P V + N+ M V+ A + M + + P+ + +++++G C+
Sbjct: 194 MKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGK 253
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+++ + LL+ M ++YN+LI G C+ G +S+A +L + M G +++T+N+
Sbjct: 254 LDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNT 313
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ C+ + + + ++ + P+ TYN L++G + G + A ++D+ G
Sbjct: 314 LIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNG 373
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 231
+ TYN +I GLCK+ +A + +++ + + TF +I
Sbjct: 374 IQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALI 420
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 91/176 (51%)
Query: 10 VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEAL 69
V PN VTYN+L++GY + A + M G+ D+L+Y+ +I GLCK +A
Sbjct: 339 VAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAA 398
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
+K++ E ++PN+ T+++LI G C +EL M G + T+N + A
Sbjct: 399 QFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAF 458
Query: 130 CKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 185
C+ D ++++++ + I D T + + +GL G+ + +++ Q++ K +
Sbjct: 459 CRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKF 514
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 121 bits (303), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 126/233 (54%), Gaps = 3/233 (1%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G++ N + N L+D C V +A+ V + + + P+ +++I I+G CK V EA
Sbjct: 185 GLEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEEA 243
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
L +++M P I+Y ++I C+ + +E+L EM G P + ITY + + +
Sbjct: 244 LWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSS 303
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ-DLFKKGYNL 187
L ++ + + ++ G +PD YN L+ L + GR+++A+ VF+ ++ + G ++
Sbjct: 304 LNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSI 363
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMSKME-DNGCIHDPITFETIISALFEKGE 239
N TYN+MI C D+A+ L+ +ME N C D T++ ++ + F++G+
Sbjct: 364 NTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGD 416
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 104/214 (48%), Gaps = 3/214 (1%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M G +P V++Y +++ YC E K + + M G P+ ++Y+ +++ L K
Sbjct: 250 MKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKE 309
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLD-EMHVRGQPADIITYN 123
EAL + +M P+++ YN LI L + G++ A + EM G + TYN
Sbjct: 310 FEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYN 369
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGI-QPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 182
S + C DK I L+K++ + PD+ TY LL K G + + ++ +++
Sbjct: 370 SMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVT 429
Query: 183 KGY-NLNNWTYNTMINGLCKEGLFDEALTLMSKM 215
K + +L+ TY +I LC+ + + A L +M
Sbjct: 430 KHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEM 463
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 91/178 (51%), Gaps = 1/178 (0%)
Query: 67 EALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 126
EA+ + ++ + NT + N L+D LCK +V A +L ++ P + T+N F+
Sbjct: 173 EAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITP-NAHTFNIFI 231
Query: 127 DALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 186
CK + V++ + I+++ G +P + +Y ++ C+ E+ ++ G
Sbjct: 232 HGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSP 291
Query: 187 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
N+ TY T+++ L + F+EAL + ++M+ +GC D + + +I L G ++AE
Sbjct: 292 PNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAE 349
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 96/212 (45%), Gaps = 5/212 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
ML+ M G PN +TY ++M E +A V M + G PD L Y+ +I+ L
Sbjct: 281 MLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLA 340
Query: 61 KMKMVNEALNLLK-QMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRG--QPA 117
+ + EA + + +M + NT TYNS+I C + A ELL EM P
Sbjct: 341 RAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNP- 399
Query: 118 DIITYNSFLDALCK-GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 176
D+ TY L + K G V+ G L + V + D TY L+ LC+ + A +
Sbjct: 400 DVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCL 459
Query: 177 FQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 208
F+++ + + T ++ + K+ + + A
Sbjct: 460 FEEMISQDITPRHRTCLLLLEEVKKKNMHESA 491
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 3/175 (1%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNT-MTQMGVFPDVLSYSIMINGLCKMK 63
M + G KP+ + YN L+ + +A+ VF M ++GV + +Y+ MI C
Sbjct: 320 MKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHD 379
Query: 64 MVNEALNLLKQMHSEKII-PNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPA-DIIT 121
++A+ LLK+M S + P+ TY L+ K G V +LL EM + + D T
Sbjct: 380 EEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDEST 439
Query: 122 YNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 176
Y + LC+ + + L +++I + I P T +LL+ + K + A+ +
Sbjct: 440 YTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERI 494
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 8/149 (5%)
Query: 86 TYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS---FLDALCKGHHVDKGIALI 142
Y+ +D L K K W+ + E R + ++T N+ + ++ + +
Sbjct: 123 AYDMAVDILGKAKK----WDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIF 178
Query: 143 KKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKE 202
++ + G++ + + N+LLD LCK R++ A+ V L K N T+N I+G CK
Sbjct: 179 DRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKA 237
Query: 203 GLFDEALTLMSKMEDNGCIHDPITFETII 231
+EAL + +M+ +G I++ TII
Sbjct: 238 NRVEEALWTIQEMKGHGFRPCVISYTTII 266
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 121 bits (303), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 126/233 (54%), Gaps = 3/233 (1%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G++ N + N L+D C V +A+ V + + + P+ +++I I+G CK V EA
Sbjct: 185 GLEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEEA 243
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
L +++M P I+Y ++I C+ + +E+L EM G P + ITY + + +
Sbjct: 244 LWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSS 303
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ-DLFKKGYNL 187
L ++ + + ++ G +PD YN L+ L + GR+++A+ VF+ ++ + G ++
Sbjct: 304 LNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSI 363
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMSKME-DNGCIHDPITFETIISALFEKGE 239
N TYN+MI C D+A+ L+ +ME N C D T++ ++ + F++G+
Sbjct: 364 NTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGD 416
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 104/214 (48%), Gaps = 3/214 (1%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M G +P V++Y +++ YC E K + + M G P+ ++Y+ +++ L K
Sbjct: 250 MKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKE 309
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLD-EMHVRGQPADIITYN 123
EAL + +M P+++ YN LI L + G++ A + EM G + TYN
Sbjct: 310 FEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYN 369
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGI-QPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 182
S + C DK I L+K++ + PD+ TY LL K G + + ++ +++
Sbjct: 370 SMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVT 429
Query: 183 KGY-NLNNWTYNTMINGLCKEGLFDEALTLMSKM 215
K + +L+ TY +I LC+ + + A L +M
Sbjct: 430 KHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEM 463
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 91/178 (51%), Gaps = 1/178 (0%)
Query: 67 EALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 126
EA+ + ++ + NT + N L+D LCK +V A +L ++ P + T+N F+
Sbjct: 173 EAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITP-NAHTFNIFI 231
Query: 127 DALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 186
CK + V++ + I+++ G +P + +Y ++ C+ E+ ++ G
Sbjct: 232 HGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSP 291
Query: 187 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
N+ TY T+++ L + F+EAL + ++M+ +GC D + + +I L G ++AE
Sbjct: 292 PNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAE 349
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 96/212 (45%), Gaps = 5/212 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
ML+ M G PN +TY ++M E +A V M + G PD L Y+ +I+ L
Sbjct: 281 MLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLA 340
Query: 61 KMKMVNEALNLLK-QMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRG--QPA 117
+ + EA + + +M + NT TYNS+I C + A ELL EM P
Sbjct: 341 RAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNP- 399
Query: 118 DIITYNSFLDALCK-GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 176
D+ TY L + K G V+ G L + V + D TY L+ LC+ + A +
Sbjct: 400 DVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCL 459
Query: 177 FQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 208
F+++ + + T ++ + K+ + + A
Sbjct: 460 FEEMISQDITPRHRTCLLLLEEVKKKNMHESA 491
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 3/175 (1%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNT-MTQMGVFPDVLSYSIMINGLCKMK 63
M + G KP+ + YN L+ + +A+ VF M ++GV + +Y+ MI C
Sbjct: 320 MKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHD 379
Query: 64 MVNEALNLLKQMHSEKII-PNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPA-DIIT 121
++A+ LLK+M S + P+ TY L+ K G V +LL EM + + D T
Sbjct: 380 EEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDEST 439
Query: 122 YNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 176
Y + LC+ + + L +++I + I P T +LL+ + K + A+ +
Sbjct: 440 YTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERI 494
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 8/149 (5%)
Query: 86 TYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS---FLDALCKGHHVDKGIALI 142
Y+ +D L K K W+ + E R + ++T N+ + ++ + +
Sbjct: 123 AYDMAVDILGKAKK----WDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIF 178
Query: 143 KKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKE 202
++ + G++ + + N+LLD LCK R++ A+ V L K N T+N I+G CK
Sbjct: 179 DRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKA 237
Query: 203 GLFDEALTLMSKMEDNGCIHDPITFETII 231
+EAL + +M+ +G I++ TII
Sbjct: 238 NRVEEALWTIQEMKGHGFRPCVISYTTII 266
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 120 bits (302), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 127/278 (45%), Gaps = 36/278 (12%)
Query: 3 AVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKM 62
+VM + G+ PN T+N L + +C + + M + G PD+++Y+ +++ C+
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 284
Query: 63 KMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 122
+ EA L K M+ +++P+ +TY SLI GLCK G+V A + M RG D ++Y
Sbjct: 285 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSY 344
Query: 123 NSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 182
N+ + A CK + + L+ +++ + PD T ++++G + GR+ A +L +
Sbjct: 345 NTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRR 404
Query: 183 ------------------------------------KGYNLNNWTYNTMINGLCKEGLFD 206
+G+ TYN +I L + +
Sbjct: 405 LKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIE 464
Query: 207 EALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
EAL L K+++ + D T+ +I L G N +AE
Sbjct: 465 EALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAE 502
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 128/274 (46%), Gaps = 36/274 (13%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ +M ++ V P++VTY SL+ G C V +A F+ M G+ PD +SY+ +I C
Sbjct: 293 LYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYC 352
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDG--------------------------- 93
K M+ ++ LL +M ++P+ T +++G
Sbjct: 353 KEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFE 412
Query: 94 --------LCKTGKVSNAWELLDEM-HVRGQPADIITYNSFLDALCKGHHVDKGIALIKK 144
LC+ GK A LLD + G A TYN+ +++L + +++ + L K
Sbjct: 413 VCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGK 472
Query: 145 VIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGL 204
+ ++ D TY L+ LC+ GR ++A+ + ++F +++ ++ G CKE
Sbjct: 473 LKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELD 532
Query: 205 FDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
FD+A L+S I DP ++ +++ A+ E G
Sbjct: 533 FDKAERLLSLFAMEFRIFDPESYNSLVKAVCETG 566
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 111/212 (52%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
++ G +VVT N L++G ++ + V++ M ++G+ P+ +++I+ N C
Sbjct: 192 VLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSN 251
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
E + L++M E P+ +TYN+L+ C+ G++ A+ L M+ R D++TY S
Sbjct: 252 FREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTS 311
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ LCK V + +++D+GI+PD +YN L+ CK G ++ ++++ ++
Sbjct: 312 LIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNS 371
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKME 216
+ +T ++ G +EG A+ + ++
Sbjct: 372 VVPDRFTCKVIVEGFVREGRLLSAVNFVVELR 403
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 113/225 (50%)
Query: 15 VTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQ 74
V ++ L+ GY + V + VF + G V++ + ++NGL K+ ++ + +
Sbjct: 167 VVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSV 226
Query: 75 MHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 134
M I PNT T+N L + C + L++M G D++TYN+ + + C+
Sbjct: 227 MCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGR 286
Query: 135 VDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 194
+ + L K + + + PD+ TY L+ GLCK GR+++A + F + +G + +YNT
Sbjct: 287 LKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNT 346
Query: 195 MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
+I CKEG+ ++ L+ +M N + D T + I+ +G
Sbjct: 347 LIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGR 391
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 101/191 (52%)
Query: 48 DVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELL 107
D + + +++ G K+ +V E + +++ + +T N L++GL K + + W++
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 108 DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKC 167
M G + T+N + C + + ++K+ ++G +PD+ TYN L+ C+
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 284
Query: 168 GRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITF 227
GR+K+A +++ ++++ + TY ++I GLCK+G EA +M D G D +++
Sbjct: 285 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSY 344
Query: 228 ETIISALFEKG 238
T+I A ++G
Sbjct: 345 NTLIYAYCKEG 355
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 87/178 (48%), Gaps = 11/178 (6%)
Query: 71 LLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS-FLDAL 129
LL + S K P + + LC+ ++++ E +D V D ++ D L
Sbjct: 119 LLHILVSSKKFPLAMQF------LCELIELTSKKEEVDVFRVLVSATDECNWDPVVFDML 172
Query: 130 CKGH----HVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 185
KG+ V++G + ++V+D G + T N LL+GL K ++D +V+ + + G
Sbjct: 173 VKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGI 232
Query: 186 NLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ N +T+N + N C + F E + KME+ G D +T+ T++S+ +G +A
Sbjct: 233 HPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEA 290
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 75/162 (46%), Gaps = 1/162 (0%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
++ ++G + TYN+L++ + + +A + + D +Y +I LC++
Sbjct: 437 IIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIG 496
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
EA +L+ +M ++ P++ +L+ G CK A LL + + D +YN
Sbjct: 497 RNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYN 556
Query: 124 SFLDALCK-GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGL 164
S + A+C+ G K + L +++ G P+ T L+ L
Sbjct: 557 SLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLIQVL 598
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 120 bits (302), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 123/230 (53%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M ++G +PNVV++N+L+ G+ ++ + + M ++G + I+++GLC+
Sbjct: 254 MKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGR 313
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V++A L+ + +++++P+ Y SL++ LC K A E+++E+ +GQ I +
Sbjct: 314 VDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTT 373
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++ L K +K ++K+++ GI PD T+N+LL LC DA + KG
Sbjct: 374 LVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKG 433
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
Y + TY+ +++G KEG E L+++M D + D T+ ++ L
Sbjct: 434 YEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGL 483
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 117/224 (52%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALN 70
KPNV YN++++GY +++KA + M + PDV +++I+ING C+ + AL+
Sbjct: 190 KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALD 249
Query: 71 LLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 130
L ++M + PN +++N+LI G +GK+ ++ EM G T +D LC
Sbjct: 250 LFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLC 309
Query: 131 KGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 190
+ VD L+ +++K + P Y L++ LC + A E+ ++L+KKG
Sbjct: 310 REGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFI 369
Query: 191 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
T++ GL K G ++A M KM + G + D +TF ++ L
Sbjct: 370 ACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDL 413
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 120/228 (52%), Gaps = 1/228 (0%)
Query: 17 YNSLMDGYCLVNEVNKAQAVFNTMTQM-GVFPDVLSYSIMINGLCKMKMVNEALNLLKQM 75
+ S +D YC +++ A F+TM ++ P+V Y+ ++NG K +++AL ++M
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 76 HSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHV 135
E+ P+ T+N LI+G C++ K A +L EM +G +++++N+ + +
Sbjct: 220 GKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKI 279
Query: 136 DKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTM 195
++G+ + ++I+ G + T IL+DGLC+ GR+ DA + DL K + + Y ++
Sbjct: 280 EEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSL 339
Query: 196 INGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ LC E A+ +M ++ G I T++ L + G +KA
Sbjct: 340 VEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKA 387
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 86/170 (50%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
++ + V P+ Y SL++ C N+ +A + + + G P ++ + ++ GL K
Sbjct: 324 LLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGR 383
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+A +++M + I+P+++T+N L+ LC + ++A L +G D TY+
Sbjct: 384 TEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHV 443
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQ 174
+ K +G L+ +++DK + PD+ TYN L+DGL G+ Q
Sbjct: 444 LVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSRKQ 493
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 1/143 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M+ + K+G P + +L++G KA M G+ PD +++++++ LC
Sbjct: 355 MMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLC 414
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+A L S+ P+ TY+ L+ G K G+ L++EM + DI
Sbjct: 415 SSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIF 474
Query: 121 TYNSFLDAL-CKGHHVDKGIALI 142
TYN +D L C G K + ++
Sbjct: 475 TYNRLMDGLSCTGKFSRKQVRML 497
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 120 bits (301), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 125/245 (51%), Gaps = 2/245 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M + G++P++V + +L+ GY ++ A + N M + G P+V Y+++I LC
Sbjct: 258 VLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALC 317
Query: 61 KM-KMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADI 119
+ K ++EA+ + +M + +TY +LI G CK G + + +LD+M +G
Sbjct: 318 RTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQ 377
Query: 120 ITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
+TY + A K ++ + LI+K+ +G PD+ YN+++ CK G +K+A ++ +
Sbjct: 378 VTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNE 437
Query: 180 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
+ G + T+ MING +G EA +M G P + T+ S L
Sbjct: 438 MEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAP-QYGTLKSLLNNLVR 496
Query: 240 NDKAE 244
+DK E
Sbjct: 497 DDKLE 501
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 119/234 (50%), Gaps = 1/234 (0%)
Query: 6 MKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMV 65
M++ PN+ + SL+ G+C ++ +A+ V M + G+ PD++ ++ +++G +
Sbjct: 228 MREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKM 287
Query: 66 NEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGK-VSNAWELLDEMHVRGQPADIITYNS 124
+A +L+ M PN Y LI LC+T K + A + EM G ADI+TY +
Sbjct: 288 ADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTA 347
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ CK +DKG +++ + KG+ P TY ++ K + ++ E+ + + ++G
Sbjct: 348 LISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRG 407
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
+ + YN +I CK G EA+ L ++ME NG TF +I+ +G
Sbjct: 408 CHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQG 461
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 107/215 (49%), Gaps = 2/215 (0%)
Query: 20 LMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEK 79
LM + N V KA V + M + G+ PD + +++ LCK V EA + + M EK
Sbjct: 173 LMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMR-EK 231
Query: 80 IIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGI 139
PN + SL+ G C+ GK+ A E+L +M G DI+ + + L +
Sbjct: 232 FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAY 291
Query: 140 ALIKKVIDKGIQPDMCTYNILLDGLCKC-GRIKDAQEVFQDLFKKGYNLNNWTYNTMING 198
L+ + +G +P++ Y +L+ LC+ R+ +A VF ++ + G + TY +I+G
Sbjct: 292 DLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISG 351
Query: 199 LCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
CK G+ D+ +++ M G + +T+ I+ A
Sbjct: 352 FCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVA 386
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 99/193 (51%), Gaps = 2/193 (1%)
Query: 52 YSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMH 111
+ +++ MV +A+ +L +M + P+ + L+D LCK G V A ++ ++M
Sbjct: 170 FVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMR 229
Query: 112 VRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIK 171
+ P ++ + S L C+ + + ++ ++ + G++PD+ + LL G G++
Sbjct: 230 EKF-PPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMA 288
Query: 172 DAQEVFQDLFKKGYNLNNWTYNTMINGLCK-EGLFDEALTLMSKMEDNGCIHDPITFETI 230
DA ++ D+ K+G+ N Y +I LC+ E DEA+ + +ME GC D +T+ +
Sbjct: 289 DAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTAL 348
Query: 231 ISALFEKGENDKA 243
IS + G DK
Sbjct: 349 ISGFCKWGMIDKG 361
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 79/154 (51%), Gaps = 6/154 (3%)
Query: 89 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF---LDALCKGHHVDKGIALIKKV 145
S++ L K + W L++EM R ++I F + + V K + ++ ++
Sbjct: 136 SMVMILSKMRQFGAVWGLIEEM--RKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEM 193
Query: 146 IDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLF 205
G++PD + LLD LCK G +K+A +VF+D+ +K + N + +++ G C+EG
Sbjct: 194 PKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGWCREGKL 252
Query: 206 DEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
EA ++ +M++ G D + F ++S G+
Sbjct: 253 MEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGK 286
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 120 bits (301), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 126/238 (52%), Gaps = 6/238 (2%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ +G+K N V + ++ YC ++ +A F M +F D + Y++ + L K+
Sbjct: 344 MLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGR 403
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V EA LL++M I+P+ I Y +LIDG C GKV +A +L+DEM G D+ITYN
Sbjct: 404 VEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNV 463
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ L + H ++ + + +++ +G +P+ T +++++GLC ++K+A++ F L +K
Sbjct: 464 LVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKC 523
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMED--NGCIHDPITFETIISALFEKGEN 240
N ++ + G C+ GL +A ++E ++ + F I EK +
Sbjct: 524 PE-NKASF---VKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHD 577
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 110/225 (48%), Gaps = 4/225 (1%)
Query: 19 SLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSE 78
+++D YC + +A + M G+ + + S+++ CKM M EAL K+
Sbjct: 323 AVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDM 382
Query: 79 KIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKG 138
I + + YN D L K G+V A+ELL EM RG D+I Y + +D C V
Sbjct: 383 NIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDA 442
Query: 139 IALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMING 198
+ LI ++I G+ PD+ TYN+L+ GL + G ++ E+++ + +G N T + +I G
Sbjct: 443 LDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEG 502
Query: 199 LCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
LC EA S +E C + +F + E G + KA
Sbjct: 503 LCFARKVKEAEDFFSSLEQK-CPENKASF---VKGYCEAGLSKKA 543
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 106/211 (50%), Gaps = 14/211 (6%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M V+P ++ +C +N V +AQ +F+TM + G+ PD+ +Y+IMI+ C
Sbjct: 578 VLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYC 637
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCK-----------TGKV--SNAWELL 107
++ + +A +L + M I P+ +TY L+D K G+V A E+L
Sbjct: 638 RLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVL 697
Query: 108 DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKC 167
E G D++ Y +D CK +++++ L ++ID G++PDM Y L+ +
Sbjct: 698 REFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRK 757
Query: 168 GRIKDAQEVFQDLFKKGYNLNNWTYNTMING 198
G I A + +L KK YN+ + ++ +
Sbjct: 758 GYIDMAVTLVTELSKK-YNIPSESFEAAVKS 787
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 122/259 (47%), Gaps = 28/259 (10%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M +G+ P+V+ Y +L+DGYCL +V A + + M G+ PD+++Y+++++GL
Sbjct: 410 LLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLA 469
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMH--------- 111
+ E L + ++M +E PN +T + +I+GLC KV A + +
Sbjct: 470 RNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKAS 529
Query: 112 -VRG------------------QPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQP 152
V+G P Y +LC +++K ++KK+ ++P
Sbjct: 530 FVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEP 589
Query: 153 DMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLM 212
++ CK +++AQ +F + ++G + +TY MI+ C+ +A +L
Sbjct: 590 GRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLF 649
Query: 213 SKMEDNGCIHDPITFETII 231
M+ G D +T+ ++
Sbjct: 650 EDMKQRGIKPDVVTYTVLL 668
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 125/282 (44%), Gaps = 45/282 (15%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQ---------------MGV---- 45
M +G KPN VT + +++G C +V +A+ F+++ Q G+
Sbjct: 484 MKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKA 543
Query: 46 --------FPDVLSYSIMIN---GLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGL 94
+P L S+ I LC + +A ++LK+M + ++ P +I
Sbjct: 544 YKAFVRLEYP--LRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAF 601
Query: 95 CKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDM 154
CK V A L D M RG D+ TY + C+ + + K +L + + +GI+PD+
Sbjct: 602 CKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDV 661
Query: 155 CTYNILLDGLCKC-----------GRI--KDAQEVFQDLFKKGYNLNNWTYNTMINGLCK 201
TY +LLD K G + + A EV ++ G L+ Y +I+ CK
Sbjct: 662 VTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCK 721
Query: 202 EGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
++A L +M D+G D + + T+IS+ F KG D A
Sbjct: 722 MNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMA 763
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 107/215 (49%)
Query: 20 LMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEK 79
++ G+C ++ A++V M ++G DV + +I+ CK + EAL L +M +
Sbjct: 289 VVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKG 348
Query: 80 IIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGI 139
+ N + + ++ CK A E E D + YN DAL K V++
Sbjct: 349 LKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAF 408
Query: 140 ALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGL 199
L++++ D+GI PD+ Y L+DG C G++ DA ++ ++ G + + TYN +++GL
Sbjct: 409 ELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGL 468
Query: 200 CKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
+ G +E L + +M+ G + +T II L
Sbjct: 469 ARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGL 503
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 13/213 (6%)
Query: 16 TYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQM 75
Y L C+ + KA V M+ V P MI CK+ V EA L M
Sbjct: 558 VYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTM 617
Query: 76 HSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK---G 132
+IP+ TY +I C+ ++ A L ++M RG D++TY LD K
Sbjct: 618 VERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPE 677
Query: 133 HH----------VDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 182
HH K ++++ GI D+ Y +L+D CK ++ A E+F +
Sbjct: 678 HHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMID 737
Query: 183 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM 215
G + Y T+I+ ++G D A+TL++++
Sbjct: 738 SGLEPDMVAYTTLISSYFRKGYIDMAVTLVTEL 770
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 119/298 (39%), Gaps = 79/298 (26%)
Query: 18 NSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHS 77
N LM+ ++ +F + Q+G+ + +Y+I++ LC+ + EA LL + S
Sbjct: 185 NFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIENES 244
Query: 78 EKIIPNTITYNSLIDGLCKTGKVSNA----WELLD------------------------- 108
Y + I+GLC TG+ A EL+D
Sbjct: 245 ------VFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMK 298
Query: 109 ---------EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQP------- 152
EM G D+ + +D CK ++ + + + K++ KG++
Sbjct: 299 MKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSL 358
Query: 153 --------DMCT--------------------YNILLDGLCKCGRIKDAQEVFQDLFKKG 184
DMC YN+ D L K GR+++A E+ Q++ +G
Sbjct: 359 ILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRG 418
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 242
+ Y T+I+G C +G +AL L+ +M NG D IT+ ++S L G ++
Sbjct: 419 IVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEE 476
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 91/204 (44%), Gaps = 9/204 (4%)
Query: 19 SLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSE 78
+L+ Y + ++A V ++ D+ + + ++N + + + + L KQ+
Sbjct: 151 ALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQL 210
Query: 79 KIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKG 138
+ N TY ++ LC+ G + A LL E + Y +F++ LC +K
Sbjct: 211 GLCANEYTYAIVVKALCRKGNLEEAAMLLIENE------SVFGYKTFINGLCVTGETEKA 264
Query: 139 IALIKKVIDKGIQPD---MCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTM 195
+ALI ++ID+ +++ G C ++K A+ V ++ + G+ L+ + +
Sbjct: 265 VALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAV 324
Query: 196 INGLCKEGLFDEALTLMSKMEDNG 219
I+ CK EAL + KM G
Sbjct: 325 IDRYCKNMNLPEALGFLDKMLGKG 348
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 120 bits (300), Expect = 1e-27, Method: Composition-based stats.
Identities = 66/235 (28%), Positives = 126/235 (53%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M++ G +PN VTYN L+ Y N +N+A VFN M + G PD ++Y +I+
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K ++ A+++ ++M + + P+T TY+ +I+ L K G + A +L EM +G +++
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN +D K + + L + + + G +PD TY+I+++ L CG +++A+ VF ++
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALF 235
+K + + Y +++ K G ++A M G + T +++S
Sbjct: 566 QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFL 620
Score = 100 bits (250), Expect = 7e-22, Method: Composition-based stats.
Identities = 57/235 (24%), Positives = 115/235 (48%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G K + TY +++ + + + M + G P+ ++Y+ +I+ + +NEA
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
+N+ QM P+ +TY +LID K G + A ++ M G D TY+ ++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
L K H+ L +++D+G P++ TYNI++D K ++A ++++D+ G+ +
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
TY+ ++ L G +EA + ++M+ I D + ++ + G +KA
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Score = 91.3 bits (225), Expect = 5e-19, Method: Composition-based stats.
Identities = 55/203 (27%), Positives = 100/203 (49%)
Query: 42 QMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVS 101
Q G D +Y+ M+ L + K LL +M + PNT+TYN LI + ++
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 102 NAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILL 161
A + ++M G D +TY + +D K +D + + +++ G+ PD TY++++
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 162 DGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCI 221
+ L K G + A ++F ++ +G N TYN M++ K + AL L M++ G
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 222 HDPITFETIISALFEKGENDKAE 244
D +T+ ++ L G ++AE
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAE 559
Score = 86.7 bits (213), Expect = 1e-17, Method: Composition-based stats.
Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 1/167 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ QG PN+VTYN +MD + A ++ M G PD ++YSI++ L
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ EA + +M + IP+ Y L+D K G V AW+ M G ++ T NS
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNS 614
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIK 171
L + + + + L++ ++ G++P + TY +LL C GR K
Sbjct: 615 LLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDGRSK 660
Score = 79.0 bits (193), Expect = 3e-15, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 1/203 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M M G+ P+ TY+ +++ + A +F M G P++++Y+IM++
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + AL L + M + P+ +TY+ +++ L G + A + EM + D
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
Y +D K +V+K + ++ G++P++ T N LL + +I +A E+ Q++
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Query: 181 FKKGYNLNNWTYNTMINGLCKEG 203
G + TY T++ C +G
Sbjct: 636 LALGLRPSLQTY-TLLLSCCTDG 657
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 120 bits (300), Expect = 1e-27, Method: Composition-based stats.
Identities = 66/235 (28%), Positives = 126/235 (53%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M++ G +PN VTYN L+ Y N +N+A VFN M + G PD ++Y +I+
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K ++ A+++ ++M + + P+T TY+ +I+ L K G + A +L EM +G +++
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN +D K + + L + + + G +PD TY+I+++ L CG +++A+ VF ++
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALF 235
+K + + Y +++ K G ++A M G + T +++S
Sbjct: 566 QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFL 620
Score = 100 bits (250), Expect = 7e-22, Method: Composition-based stats.
Identities = 57/235 (24%), Positives = 115/235 (48%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G K + TY +++ + + + M + G P+ ++Y+ +I+ + +NEA
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
+N+ QM P+ +TY +LID K G + A ++ M G D TY+ ++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
L K H+ L +++D+G P++ TYNI++D K ++A ++++D+ G+ +
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
TY+ ++ L G +EA + ++M+ I D + ++ + G +KA
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Score = 91.3 bits (225), Expect = 5e-19, Method: Composition-based stats.
Identities = 55/203 (27%), Positives = 100/203 (49%)
Query: 42 QMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVS 101
Q G D +Y+ M+ L + K LL +M + PNT+TYN LI + ++
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 102 NAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILL 161
A + ++M G D +TY + +D K +D + + +++ G+ PD TY++++
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 162 DGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCI 221
+ L K G + A ++F ++ +G N TYN M++ K + AL L M++ G
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 222 HDPITFETIISALFEKGENDKAE 244
D +T+ ++ L G ++AE
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAE 559
Score = 86.7 bits (213), Expect = 1e-17, Method: Composition-based stats.
Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 1/167 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ QG PN+VTYN +MD + A ++ M G PD ++YSI++ L
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ EA + +M + IP+ Y L+D K G V AW+ M G ++ T NS
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNS 614
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIK 171
L + + + + L++ ++ G++P + TY +LL C GR K
Sbjct: 615 LLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDGRSK 660
Score = 79.0 bits (193), Expect = 3e-15, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 1/203 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M M G+ P+ TY+ +++ + A +F M G P++++Y+IM++
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + AL L + M + P+ +TY+ +++ L G + A + EM + D
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
Y +D K +V+K + ++ G++P++ T N LL + +I +A E+ Q++
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Query: 181 FKKGYNLNNWTYNTMINGLCKEG 203
G + TY T++ C +G
Sbjct: 636 LALGLRPSLQTY-TLLLSCCTDG 657
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 120 bits (300), Expect = 1e-27, Method: Composition-based stats.
Identities = 66/235 (28%), Positives = 126/235 (53%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M++ G +PN VTYN L+ Y N +N+A VFN M + G PD ++Y +I+
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K ++ A+++ ++M + + P+T TY+ +I+ L K G + A +L EM +G +++
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN +D K + + L + + + G +PD TY+I+++ L CG +++A+ VF ++
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALF 235
+K + + Y +++ K G ++A M G + T +++S
Sbjct: 566 QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFL 620
Score = 100 bits (250), Expect = 7e-22, Method: Composition-based stats.
Identities = 57/235 (24%), Positives = 115/235 (48%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G K + TY +++ + + + M + G P+ ++Y+ +I+ + +NEA
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
+N+ QM P+ +TY +LID K G + A ++ M G D TY+ ++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
L K H+ L +++D+G P++ TYNI++D K ++A ++++D+ G+ +
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
TY+ ++ L G +EA + ++M+ I D + ++ + G +KA
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Score = 91.3 bits (225), Expect = 5e-19, Method: Composition-based stats.
Identities = 55/203 (27%), Positives = 100/203 (49%)
Query: 42 QMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVS 101
Q G D +Y+ M+ L + K LL +M + PNT+TYN LI + ++
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 102 NAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILL 161
A + ++M G D +TY + +D K +D + + +++ G+ PD TY++++
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 162 DGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCI 221
+ L K G + A ++F ++ +G N TYN M++ K + AL L M++ G
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 222 HDPITFETIISALFEKGENDKAE 244
D +T+ ++ L G ++AE
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAE 559
Score = 86.7 bits (213), Expect = 1e-17, Method: Composition-based stats.
Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 1/167 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ QG PN+VTYN +MD + A ++ M G PD ++YSI++ L
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ EA + +M + IP+ Y L+D K G V AW+ M G ++ T NS
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNS 614
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIK 171
L + + + + L++ ++ G++P + TY +LL C GR K
Sbjct: 615 LLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDGRSK 660
Score = 79.0 bits (193), Expect = 3e-15, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 1/203 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M M G+ P+ TY+ +++ + A +F M G P++++Y+IM++
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + AL L + M + P+ +TY+ +++ L G + A + EM + D
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
Y +D K +V+K + ++ G++P++ T N LL + +I +A E+ Q++
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Query: 181 FKKGYNLNNWTYNTMINGLCKEG 203
G + TY T++ C +G
Sbjct: 636 LALGLRPSLQTY-TLLLSCCTDG 657
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 122/238 (51%), Gaps = 1/238 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M K+GVK NVVTY +L+ C V+ V KA + M + G PD Y +I+GLC+++
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++A+ +++++ + + YN LI C +E+L +M G+ D ITYN+
Sbjct: 527 DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNT 586
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL-FKK 183
+ K + +++++ + G+ P + TY ++D C G + +A ++F+D+
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHS 646
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
N N YN +IN K G F +AL+L +M+ + T+ + L EK + +
Sbjct: 647 KVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGE 704
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 128/241 (53%), Gaps = 7/241 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L+ +MK +N+L+ ++++ + M ++ + PDV++ I+IN LC
Sbjct: 281 ILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLC 340
Query: 61 KMKMVNEALNLLKQMHSEK------IIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRG 114
K + V+EAL + +QM ++ I ++I +N+LIDGLCK G++ A ELL M +
Sbjct: 341 KSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEE 400
Query: 115 Q-PADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDA 173
+ + +TYN +D C+ ++ ++ ++ + I+P++ T N ++ G+C+ + A
Sbjct: 401 RCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMA 460
Query: 174 QEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
F D+ K+G N TY T+I+ C ++A+ KM + GC D + +IS
Sbjct: 461 VVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISG 520
Query: 234 L 234
L
Sbjct: 521 L 521
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 114/232 (49%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNL 71
PN VTYN L+DGYC ++ A+ V + M + + P+V++ + ++ G+C+ +N A+
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 72 LKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 131
M E + N +TY +LI C V A ++M G D Y + + LC+
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 132 GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT 191
I +++K+ + G D+ YN+L+ C + E+ D+ K+G ++ T
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSIT 583
Query: 192 YNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
YNT+I+ K F+ +M +M ++G T+ +I A GE D+A
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEA 635
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 129/247 (52%), Gaps = 18/247 (7%)
Query: 8 QGVKPNVVTYNSLMD-GYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVN 66
+ V +V+ N L+D + +++E+ + ++VF P+ ++ I+++ + K +++
Sbjct: 188 RNVVVDVLLRNGLVDDAFKVLDEMLQKESVFP--------PNRITADIVLHEVWKERLLT 239
Query: 67 EA--LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
E + L+ + S + PN++ I LCK + + AW++L ++ P + +N+
Sbjct: 240 EEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNA 299
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
L L + + + L+ K+ + I+PD+ T IL++ LCK R+ +A EVF+ + K
Sbjct: 300 LLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKR 359
Query: 185 YNLNNWT------YNTMINGLCKEGLFDEALTLMSKME-DNGCIHDPITFETIISALFEK 237
+ N +NT+I+GLCK G EA L+ +M+ + C+ + +T+ +I
Sbjct: 360 TDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRA 419
Query: 238 GENDKAE 244
G+ + A+
Sbjct: 420 GKLETAK 426
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 70/131 (53%), Gaps = 3/131 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
ML M K+G KP+ +TYN+L+ + + + + M + G+ P V +Y +I+ C
Sbjct: 568 MLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYC 627
Query: 61 KMKMVNEALNLLKQM--HSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPAD 118
+ ++EAL L K M HS K+ PNT+ YN LI+ K G A L +EM ++ +
Sbjct: 628 SVGELDEALKLFKDMGLHS-KVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPN 686
Query: 119 IITYNSFLDAL 129
+ TYN+ L
Sbjct: 687 VETYNALFKCL 697
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTM-TQMGVFPDVLSYSIMINGL 59
M+ M + G+ P V TY +++D YC V E+++A +F M V P+ + Y+I+IN
Sbjct: 603 MMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAF 662
Query: 60 CKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEM 110
K+ +AL+L ++M + + PN TYN+L L + + +L+DEM
Sbjct: 663 SKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEM 713
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 119 bits (297), Expect = 3e-27, Method: Composition-based stats.
Identities = 65/239 (27%), Positives = 123/239 (51%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+K+G+KP+V+ YN+++ +C + +++A M ++ P ++ +I+G K
Sbjct: 545 MVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD 604
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ +L + M +P T+N LI+GL + ++ A E+LDEM + G A+ TY
Sbjct: 605 MRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTK 664
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ K ++ ++G+ D+ TY LL CK GR++ A V +++ +
Sbjct: 665 IMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARN 724
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
N++ YN +I+G + G EA L+ +M+ G D T+ + ISA + G+ ++A
Sbjct: 725 IPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRA 783
Score = 115 bits (287), Expect = 3e-26, Method: Composition-based stats.
Identities = 64/239 (26%), Positives = 125/239 (52%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M ++G+ + Y+++MDGY +V + K VF + + G P V++Y +IN K+
Sbjct: 440 MEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGK 499
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+++AL + + M E + N TY+ +I+G K +NA+ + ++M G D+I YN+
Sbjct: 500 ISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNN 559
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ A C ++D+ I +K++ +P T+ ++ G K G ++ + EVF + + G
Sbjct: 560 IISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCG 619
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
T+N +INGL ++ ++A+ ++ +M G + T+ I+ G+ KA
Sbjct: 620 CVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKA 678
Score = 108 bits (271), Expect = 2e-24, Method: Composition-based stats.
Identities = 63/239 (26%), Positives = 115/239 (48%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M K +P T+ ++ GY ++ ++ VF+ M + G P V +++ +INGL + +
Sbjct: 580 MQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQ 639
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ +A+ +L +M + N TY ++ G G A+E + G DI TY +
Sbjct: 640 MEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEA 699
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
L A CK + +A+ K++ + I + YNIL+DG + G + +A ++ Q + K+G
Sbjct: 700 LLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEG 759
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ TY + I+ K G + A + +ME G + T+ T+I +KA
Sbjct: 760 VKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKA 818
Score = 104 bits (259), Expect = 6e-23, Method: Composition-based stats.
Identities = 57/235 (24%), Positives = 115/235 (48%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
+M + G P V T+N L++G ++ KA + + MT GV + +Y+ ++ G +
Sbjct: 614 MMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVG 673
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
+A ++ +E + + TY +L+ CK+G++ +A + EM R P + YN
Sbjct: 674 DTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYN 733
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+D + V + LI+++ +G++PD+ TY + K G + A + +++
Sbjct: 734 ILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEAL 793
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
G N TY T+I G + L ++AL+ +M+ G D + ++++L +
Sbjct: 794 GVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRA 848
Score = 103 bits (258), Expect = 8e-23, Method: Composition-based stats.
Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 6/229 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M GV N TY +M GY V + KA F + G+ D+ +Y ++ C
Sbjct: 646 ILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACC 705
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + AL + K+M + I N+ YN LIDG + G V A +L+ +M G DI
Sbjct: 706 KSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIH 765
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY SF+ A K +++ I+++ G++P++ TY L+ G + + A ++++
Sbjct: 766 TYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEM 825
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEA------LTLMSKMEDNGCIHD 223
G + Y+ ++ L EA +T+ +M + G I D
Sbjct: 826 KAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVD 874
Score = 101 bits (252), Expect = 4e-22, Method: Composition-based stats.
Identities = 63/236 (26%), Positives = 116/236 (49%), Gaps = 2/236 (0%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G P VVTY L++ Y V +++KA V M + GV ++ +YS+MING K+K A
Sbjct: 479 GFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANA 538
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMH-VRGQPADIITYNSFLD 127
+ + M E + P+ I YN++I C G + A + + EM +R +P T+ +
Sbjct: 539 FAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPT-TRTFMPIIH 597
Query: 128 ALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
K + + + + + G P + T+N L++GL + +++ A E+ ++ G +
Sbjct: 598 GYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSA 657
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
N TY ++ G G +A +++++ G D T+E ++ A + G A
Sbjct: 658 NEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSA 713
Score = 96.3 bits (238), Expect = 1e-20, Method: Composition-based stats.
Identities = 66/242 (27%), Positives = 111/242 (45%), Gaps = 6/242 (2%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M +G+ P Y SL+ Y + ++++A + M + G+ +++YS+++ G K
Sbjct: 335 MRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGH 394
Query: 65 VNEA---LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 121
A + K++H N Y +I C+T + A L+ EM G A I
Sbjct: 395 AEAADYWFDEAKRIHKTL---NASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAI 451
Query: 122 YNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF 181
Y++ +D KG+ + K++ + G P + TY L++ K G+I A EV + +
Sbjct: 452 YHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMK 511
Query: 182 KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
++G N TY+ MING K + A + M G D I + IISA G D
Sbjct: 512 EEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMD 571
Query: 242 KA 243
+A
Sbjct: 572 RA 573
Score = 94.0 bits (232), Expect = 8e-20, Method: Composition-based stats.
Identities = 55/231 (23%), Positives = 107/231 (46%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
N Y ++ +C + +A+A+ M + G+ + Y M++G + + L +
Sbjct: 413 NASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVF 472
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 132
K++ P +TY LI+ K GK+S A E+ M G ++ TY+ ++ K
Sbjct: 473 KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKL 532
Query: 133 HHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 192
A+ + ++ +G++PD+ YN ++ C G + A + +++ K + T+
Sbjct: 533 KDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF 592
Query: 193 NTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+I+G K G +L + M GC+ TF +I+ L EK + +KA
Sbjct: 593 MPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKA 643
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 122/238 (51%), Gaps = 1/238 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M K+GVK NVVTY +L+ C V+ V KA + M + G PD Y +I+GLC+++
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++A+ +++++ + + YN LI C +E+L +M G+ D ITYN+
Sbjct: 527 DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNT 586
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL-FKK 183
+ K + +++++ + G+ P + TY ++D C G + +A ++F+D+
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHS 646
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
N N YN +IN K G F +AL+L +M+ + T+ + L EK + +
Sbjct: 647 KVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGE 704
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 129/241 (53%), Gaps = 7/241 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L+ +MK +N+L+ ++++ + M ++ + PDV++ I+IN LC
Sbjct: 281 ILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLC 340
Query: 61 KMKMVNEALNLLKQMHSEK------IIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRG 114
K + V+EAL + ++M ++ I ++I +N+LIDGLCK G++ A ELL M +
Sbjct: 341 KSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEE 400
Query: 115 QPA-DIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDA 173
+ A + +TYN +D C+ ++ ++ ++ + I+P++ T N ++ G+C+ + A
Sbjct: 401 RCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMA 460
Query: 174 QEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
F D+ K+G N TY T+I+ C ++A+ KM + GC D + +IS
Sbjct: 461 VVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISG 520
Query: 234 L 234
L
Sbjct: 521 L 521
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 120/243 (49%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
++ + +++ PN VTYN L+DGYC ++ A+ V + M + + P+V++ + ++ G+C
Sbjct: 393 LVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMC 452
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ +N A+ M E + N +TY +LI C V A ++M G D
Sbjct: 453 RHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAK 512
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
Y + + LC+ I +++K+ + G D+ YN+L+ C + E+ D+
Sbjct: 513 IYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDM 572
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
K+G ++ TYNT+I+ K F+ +M +M ++G T+ +I A GE
Sbjct: 573 EKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGEL 632
Query: 241 DKA 243
D+A
Sbjct: 633 DEA 635
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 128/247 (51%), Gaps = 18/247 (7%)
Query: 8 QGVKPNVVTYNSLMD-GYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVN 66
+ V +V+ N L+D + +++E+ + ++VF P+ ++ I+++ + K +++
Sbjct: 188 RNVVVDVLLRNGLVDDAFKVLDEMLQKESVFP--------PNRITADIVLHEVWKGRLLT 239
Query: 67 EA--LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
E + L+ + S + PN++ I LCK + + AW++L ++ P + +N+
Sbjct: 240 EEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNA 299
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
L L + + + L+ K+ + I+PD+ T IL++ LCK R+ +A EVF+ + K
Sbjct: 300 LLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKR 359
Query: 185 YNLNNWT------YNTMINGLCKEGLFDEALTLMSKME-DNGCIHDPITFETIISALFEK 237
+ N +NT+I+GLCK G EA L+ +M+ + C + +T+ +I
Sbjct: 360 TDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRA 419
Query: 238 GENDKAE 244
G+ + A+
Sbjct: 420 GKLETAK 426
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 100/193 (51%), Gaps = 8/193 (4%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
ML M K+G KP+ +TYN+L+ + + + + M + G+ P V +Y +I+ C
Sbjct: 568 MLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYC 627
Query: 61 KMKMVNEALNLLKQM--HSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPAD 118
+ ++EAL L K M HS K+ PNT+ YN LI+ K G A L +EM ++ +
Sbjct: 628 SVGELDEALKLFKDMGLHS-KVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPN 686
Query: 119 IITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 178
+ TYN+ L + + + L+ +++++ +P+ T IL++ L + ++
Sbjct: 687 VETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRK--- 743
Query: 179 DLFKKGYNLNNWT 191
F +GY++ + T
Sbjct: 744 --FMQGYSVASPT 754
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 122/238 (51%), Gaps = 1/238 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M K+GVK NVVTY +L+ C V+ V KA + M + G PD Y +I+GLC+++
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++A+ +++++ + + YN LI C +E+L +M G+ D ITYN+
Sbjct: 527 DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNT 586
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL-FKK 183
+ K + +++++ + G+ P + TY ++D C G + +A ++F+D+
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHS 646
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
N N YN +IN K G F +AL+L +M+ + T+ + L EK + +
Sbjct: 647 KVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGE 704
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 128/241 (53%), Gaps = 7/241 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L+ +MK +N+L+ ++++ + M ++ + PDV++ I+IN LC
Sbjct: 281 ILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLC 340
Query: 61 KMKMVNEALNLLKQMHSEK------IIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRG 114
K + V+EAL + +QM ++ I ++I +N+LIDGLCK G++ A ELL M +
Sbjct: 341 KSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEE 400
Query: 115 Q-PADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDA 173
+ + +TYN +D C+ ++ ++ ++ + I+P++ T N ++ G+C+ + A
Sbjct: 401 RCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMA 460
Query: 174 QEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
F D+ K+G N TY T+I+ C ++A+ KM + GC D + +IS
Sbjct: 461 VVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISG 520
Query: 234 L 234
L
Sbjct: 521 L 521
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 114/232 (49%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNL 71
PN VTYN L+DGYC ++ A+ V + M + + P+V++ + ++ G+C+ +N A+
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 72 LKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 131
M E + N +TY +LI C V A ++M G D Y + + LC+
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 132 GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT 191
I +++K+ + G D+ YN+L+ C + E+ D+ K+G ++ T
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSIT 583
Query: 192 YNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
YNT+I+ K F+ +M +M ++G T+ +I A GE D+A
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEA 635
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 129/247 (52%), Gaps = 18/247 (7%)
Query: 8 QGVKPNVVTYNSLMD-GYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVN 66
+ V +V+ N L+D + +++E+ + ++VF P+ ++ I+++ + K +++
Sbjct: 188 RNVVVDVLLRNGLVDDAFKVLDEMLQKESVFP--------PNRITADIVLHEVWKERLLT 239
Query: 67 EA--LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
E + L+ + S + PN++ I LCK + + AW++L ++ P + +N+
Sbjct: 240 EEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNA 299
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
L L + + + L+ K+ + I+PD+ T IL++ LCK R+ +A EVF+ + K
Sbjct: 300 LLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKR 359
Query: 185 YNLNNWT------YNTMINGLCKEGLFDEALTLMSKME-DNGCIHDPITFETIISALFEK 237
+ N +NT+I+GLCK G EA L+ +M+ + C+ + +T+ +I
Sbjct: 360 TDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRA 419
Query: 238 GENDKAE 244
G+ + A+
Sbjct: 420 GKLETAK 426
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 100/193 (51%), Gaps = 8/193 (4%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
ML M K+G KP+ +TYN+L+ + + + + M + G+ P V +Y +I+ C
Sbjct: 568 MLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYC 627
Query: 61 KMKMVNEALNLLKQM--HSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPAD 118
+ ++EAL L K M HS K+ PNT+ YN LI+ K G A L +EM ++ +
Sbjct: 628 SVGELDEALKLFKDMGLHS-KVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPN 686
Query: 119 IITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 178
+ TYN+ L + + + L+ +++++ +P+ T IL++ L + ++
Sbjct: 687 VETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRK--- 743
Query: 179 DLFKKGYNLNNWT 191
F +GY++ + T
Sbjct: 744 --FMQGYSVASPT 754
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 117/239 (48%), Gaps = 7/239 (2%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFP-DVLSYSIMINGLCKMKMVNEALN 70
P V N L+ G + ++ + VF + M F D SY+I I+G ++ AL+
Sbjct: 210 PGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALS 269
Query: 71 LLKQMHSEKII------PNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
L K+M + P+ TYNSLI LC GK +A + DE+ V G D TY
Sbjct: 270 LFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRI 329
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ CK + +D + + ++ G PD YN LLDG K ++ +A ++F+ + ++G
Sbjct: 330 LIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEG 389
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ WTYN +I+GL + G + TL ++ G D ITF + L +G+ + A
Sbjct: 390 VRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGA 448
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 121/240 (50%), Gaps = 6/240 (2%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVF------PDVLSYSIMINGLCKMKM 64
K + +YN + G+ +++ A ++F M + PD+ +Y+ +I+ LC
Sbjct: 245 KFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGK 304
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+AL + ++ P+ TY LI G CK+ ++ +A + EM G D I YN
Sbjct: 305 AKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNC 364
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
LD K V + L +K++ +G++ TYNIL+DGL + GR + +F DL KKG
Sbjct: 365 LLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKG 424
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
++ T++ + LC+EG + A+ L+ +ME G D +T +++ ++G D E
Sbjct: 425 QFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKE 484
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 122/229 (53%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNL 71
P++ TYNSL+ CL + A V++ + G PD +Y I+I G CK +++A+ +
Sbjct: 287 PDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRI 346
Query: 72 LKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 131
+M +P+TI YN L+DG K KV+ A +L ++M G A TYN +D L +
Sbjct: 347 YGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFR 406
Query: 132 GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT 191
+ G L + KG D T++I+ LC+ G+++ A ++ +++ +G++++ T
Sbjct: 407 NGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVT 466
Query: 192 YNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
++++ G K+G +D LM + + + + + + + A ++ ++
Sbjct: 467 ISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQS 515
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 84/162 (51%)
Query: 8 QGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNE 67
G +P+ TY L+ G C ++ A ++ M G PD + Y+ +++G K + V E
Sbjct: 318 SGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTE 377
Query: 68 ALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 127
A L ++M E + + TYN LIDGL + G+ + L ++ +GQ D IT++
Sbjct: 378 ACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGL 437
Query: 128 ALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGR 169
LC+ ++ + L++++ +G D+ T + LL G K GR
Sbjct: 438 QLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGR 479
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 7/206 (3%)
Query: 2 LAVMMKQGVKPN---VVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSI--MI 56
LA + KP+ V N+ + Y +++ A +F MGV D+ SY+ M+
Sbjct: 579 LARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGV-TDLTSYTYNSMM 637
Query: 57 NGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQP 116
+ K A +L QM + TYN +I GL K G+ A +LD + +G
Sbjct: 638 SSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGY 697
Query: 117 ADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 176
DI+ YN+ ++AL K +D+ L + GI PD+ +YN +++ K G++K+A +
Sbjct: 698 LDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKY 757
Query: 177 FQDLFKKGYNLNNWTYNTMINGLCKE 202
+ + G L N +T+++ L KE
Sbjct: 758 LKAMLDAGC-LPNHVTDTILDYLGKE 782
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 80/164 (48%), Gaps = 4/164 (2%)
Query: 84 TITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIK 143
+ TYNS++ K G A +LD+M ADI TYN + L K D A++
Sbjct: 630 SYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLD 689
Query: 144 KVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEG 203
++ +G D+ YN L++ L K R+ +A ++F + G N + +YNTMI K G
Sbjct: 690 RLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAG 749
Query: 204 LFDEALTLMSKMEDNGCIHDPITFETIISAL---FEKGENDKAE 244
EA + M D GC+ + +T +TI+ L EK KA
Sbjct: 750 KLKEAYKYLKAMLDAGCLPNHVT-DTILDYLGKEMEKARFKKAS 792
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 81/168 (48%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M G P+ + YN L+DG +V +A +F M Q GV +Y+I+I+GL +
Sbjct: 350 MQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGR 409
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
L + + + IT++ + LC+ GK+ A +L++EM RG D++T +S
Sbjct: 410 AEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISS 469
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKD 172
L K D L+K + + + P++ +N ++ K + KD
Sbjct: 470 LLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKD 517
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 22/206 (10%)
Query: 51 SYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEM 110
+YS + +C+ ++ E +LL M + + + L+D L ++GK +A +LD M
Sbjct: 94 AYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYM 153
Query: 111 HVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDK---------------GIQPDMC 155
G + Y+S L AL K H + ++++ K+++ P
Sbjct: 154 EELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTV 213
Query: 156 TYNILLDGLCKCGRIKDAQEVFQDLFK-KGYNLNNWTYNTMINGLCKEGLFDEALTLMSK 214
N LL GL + + + VF+ L K + + W+YN I+G G D AL+L +
Sbjct: 214 AVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKE 273
Query: 215 MEDNGCIH------DPITFETIISAL 234
M++ ++ D T+ ++I L
Sbjct: 274 MKERSSVYGSSFGPDICTYNSLIHVL 299
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 15/139 (10%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M + ++ TYN ++ G + + A AV + +T+ G + D++ Y+ +IN L
Sbjct: 652 VLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALG 711
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K ++EA L M S I P+ ++YN++I+ K GK+ A++ L M
Sbjct: 712 KATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAM---------- 761
Query: 121 TYNSFLDALCKGHHVDKGI 139
LDA C +HV I
Sbjct: 762 -----LDAGCLPNHVTDTI 775
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 119/301 (39%), Gaps = 61/301 (20%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+++GV+ + TYN L+DG +F + + G F D +++SI+ LC+
Sbjct: 385 MVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGK 444
Query: 65 VNEALNLLKQMHSE-----------------------------------KIIPNTITYNS 89
+ A+ L+++M + ++PN + +N+
Sbjct: 445 LEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNA 504
Query: 90 LIDGLCK---------TGKVSNAWELLDEMHVRGQPAD-------------IITYNSFLD 127
++ K T + LD M + G D + + ++D
Sbjct: 505 GVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGASAEEVSPMEDDPWSSSPYMD 564
Query: 128 ALCKGHHVDK---GIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
L + K G+A ++V K D+ N L G + A ++F+ G
Sbjct: 565 QLAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMG 624
Query: 185 Y-NLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+L ++TYN+M++ K+G F A ++ +M +N C D T+ II L + G D A
Sbjct: 625 VTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLA 684
Query: 244 E 244
Sbjct: 685 S 685
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 117 bits (293), Expect = 7e-27, Method: Composition-based stats.
Identities = 66/235 (28%), Positives = 123/235 (52%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M++ G KPN VTYN L+ Y N + +A VFN M + G PD ++Y +I+
Sbjct: 381 LLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHA 440
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K ++ A+++ ++M + P+T TY+ +I+ L K G + A L EM +G +++
Sbjct: 441 KAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLV 500
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
T+N + K + + + L + + + G QPD TY+I+++ L CG +++A+ VF ++
Sbjct: 501 TFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEM 560
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALF 235
+K + + Y +++ K G D+A M G + T +++S
Sbjct: 561 QRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFL 615
Score = 93.2 bits (230), Expect = 1e-19, Method: Composition-based stats.
Identities = 56/203 (27%), Positives = 100/203 (49%)
Query: 42 QMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVS 101
Q G D +Y+ M+ L + K E LL +M + PNT+TYN LI + +
Sbjct: 352 QPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLK 411
Query: 102 NAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILL 161
A + ++M G D +TY + +D K +D + + +++ + G+ PD TY++++
Sbjct: 412 EAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVII 471
Query: 162 DGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCI 221
+ L K G + A +F ++ +G N T+N MI K ++ AL L M++ G
Sbjct: 472 NCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQ 531
Query: 222 HDPITFETIISALFEKGENDKAE 244
D +T+ ++ L G ++AE
Sbjct: 532 PDKVTYSIVMEVLGHCGFLEEAE 554
Score = 89.7 bits (221), Expect = 2e-18, Method: Composition-based stats.
Identities = 53/235 (22%), Positives = 112/235 (47%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G K + TY +++ + + + + M + G P+ ++Y+ +I+ + + EA
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
+N+ QM P+ +TY +LID K G + A ++ M G D TY+ ++
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINC 473
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
L K H+ L +++ +G P++ T+NI++ K + A ++++D+ G+ +
Sbjct: 474 LGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPD 533
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
TY+ ++ L G +EA + ++M+ + D + ++ + G DKA
Sbjct: 534 KVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKA 588
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 117 bits (293), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 122/271 (45%), Gaps = 40/271 (14%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M + G ++N L++GYC + A V + M G++P +Y+I I LC
Sbjct: 299 MRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGR 358
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+++A LL M + P+ ++YN+L+ G K GK A L D++ I+TYN+
Sbjct: 359 IDDARELLSSMAA----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNT 414
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D LC+ +++ L +++ + I PD+ TY L+ G K G + A EV+ ++ +KG
Sbjct: 415 LIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKG 474
Query: 185 YNLNNWT------------------------------------YNTMINGLCKEGLFDEA 208
+ + YN I+GLCK G +A
Sbjct: 475 IKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKA 534
Query: 209 LTLMSKMEDNGCIHDPITFETIISALFEKGE 239
+ K+ G + D +T+ T+I E G+
Sbjct: 535 IEFQRKIFRVGLVPDHVTYTTVIRGYLENGQ 565
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 115/235 (48%), Gaps = 4/235 (1%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
M++ G+ P V+T+N+++D ++ + ++ M + + ++Y+I+ING K
Sbjct: 228 TMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNG 287
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
+ EA M ++N LI+G CK G +AW + DEM G TYN
Sbjct: 288 KMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYN 347
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
++ ALC +D ++++ PD+ +YN L+ G K G+ +A +F DL
Sbjct: 348 IYICALCDFGRIDDA----RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAG 403
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
+ + TYNT+I+GLC+ G + A L +M D IT+ T++ + G
Sbjct: 404 DIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNG 458
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 118/241 (48%), Gaps = 6/241 (2%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+++G P+V N ++ +NKA AV+ TM + G+ P V++++ M++ K
Sbjct: 194 MIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGD 253
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ + +M I + +TYN LI+G K GK+ A +M G ++N
Sbjct: 254 LERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNP 313
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++ CK D + ++++ GI P TYNI + LC GRI DA+E+ +
Sbjct: 314 LIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAP- 372
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPI-TFETIISALFEKGENDKA 243
+ +YNT+++G K G F EA L + G IH I T+ T+I L E G + A
Sbjct: 373 ---DVVSYNTLMHGYIKMGKFVEASLLFDDLR-AGDIHPSIVTYNTLIDGLCESGNLEGA 428
Query: 244 E 244
+
Sbjct: 429 Q 429
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 115/239 (48%), Gaps = 4/239 (1%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M ++ ++ + VTYN L++G+ ++ +A+ M + G S++ +I G CK +
Sbjct: 264 MKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGL 323
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++A + +M + I P T TYN I LC G++ +A ELL M D+++YN+
Sbjct: 324 FDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNT 379
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ K + L + I P + TYN L+DGLC+ G ++ AQ + +++ +
Sbjct: 380 LMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQL 439
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ TY T++ G K G A + +M G D + T G++DKA
Sbjct: 440 IFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKA 498
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 119/241 (49%), Gaps = 1/241 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVF-PDVLSYSIMINGLCKMK 63
M+++G+KP+ Y + G + + +KA + M PD+ Y++ I+GLCK+
Sbjct: 470 MLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVG 529
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
+ +A+ +++ ++P+ +TY ++I G + G+ A L DEM + +ITY
Sbjct: 530 NLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYF 589
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ K +++ ++ +G++P++ T+N LL G+CK G I +A + ++
Sbjct: 590 VLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEE 649
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
G N ++Y +I+ C ++E + L +M D D T + L + E+ +
Sbjct: 650 GIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREV 709
Query: 244 E 244
E
Sbjct: 710 E 710
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 94/184 (51%)
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K M + L ++M + +P+ N ++ L + ++ A + + M G +I
Sbjct: 180 KKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVI 239
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
T+N+ LD+ K +++ + ++ + I+ TYNIL++G K G++++A+ D+
Sbjct: 240 TFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDM 299
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+ G+ + +++N +I G CK+GLFD+A + +M + G T+ I AL + G
Sbjct: 300 RRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRI 359
Query: 241 DKAE 244
D A
Sbjct: 360 DDAR 363
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 119/241 (49%), Gaps = 4/241 (1%)
Query: 6 MKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMV 65
++ +P + +N L+D C V + +A+ M V PD +++++ G C+++
Sbjct: 226 IRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRH-RVKPDANTFNVLFFGWCRVRDP 284
Query: 66 NEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 125
+A+ LL++M P TY + ID C+ G V A +L D M +G T +F
Sbjct: 285 KKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTF 344
Query: 126 ---LDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 182
+ AL K ++ LI ++I G PD+ TY +++G+C ++ +A + ++
Sbjct: 345 ALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSN 404
Query: 183 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 242
KGY + TYN + LC+ DEAL L +M ++ C T+ +IS FE + D
Sbjct: 405 KGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDG 464
Query: 243 A 243
A
Sbjct: 465 A 465
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 119/241 (49%), Gaps = 3/241 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVF---PDVLSYSIMIN 57
+L M++ G KP TY + +D +C V++A +F+ M G P ++++MI
Sbjct: 290 LLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIV 349
Query: 58 GLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPA 117
L K E L+ +M S +P+ TY +I+G+C KV A++ LDEM +G P
Sbjct: 350 ALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPP 409
Query: 118 DIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVF 177
DI+TYN FL LC+ D+ + L ++++ P + TYN+L+ + A +
Sbjct: 410 DIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTW 469
Query: 178 QDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK 237
++ K+ + TY MINGL EA L+ ++ + G F++ + L E
Sbjct: 470 TEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEV 529
Query: 238 G 238
G
Sbjct: 530 G 530
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 95/186 (51%), Gaps = 1/186 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
++ M+ G P+V TY +++G C+ +V++A + M+ G PD+++Y+ + LC
Sbjct: 363 LIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLC 422
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + +EAL L +M + P+ TYN LI + A+ EM R D+
Sbjct: 423 ENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVE 482
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY + ++ L H + L+++V++KG++ ++ L L + G +K +V + +
Sbjct: 483 TYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHM 542
Query: 181 FKKGYN 186
KK YN
Sbjct: 543 -KKFYN 547
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 73/136 (53%), Gaps = 2/136 (1%)
Query: 109 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCG 168
+ V+ QP +I +N LDALCK V +G AL++++ + ++PD T+N+L G C+
Sbjct: 225 RIRVKTQP-EINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVR 282
Query: 169 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFE 228
K A ++ +++ + G+ N+TY I+ C+ G+ DEA L M G T +
Sbjct: 283 DPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAK 342
Query: 229 TIISALFEKGENDKAE 244
T + +NDKAE
Sbjct: 343 TFALMIVALAKNDKAE 358
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 123/234 (52%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALN 70
+P +YN++++ V + + V+ M + G PDVL+Y+I++ ++ ++
Sbjct: 216 RPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDR 275
Query: 71 LLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 130
L +M + P++ TYN L+ L K K A L+ M G ++ Y + +D L
Sbjct: 276 LFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLS 335
Query: 131 KGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 190
+ +++ + +++ G +PD+ Y +++ G G + A+E+F+++ KG N +
Sbjct: 336 RAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVF 395
Query: 191 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
TYN+MI GLC G F EA L+ +ME GC + + + T++S L + G+ +A
Sbjct: 396 TYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEAR 449
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 111/215 (51%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ G P+V+TYN L+ + ++++ +F+ M + G PD +Y+I+++ L K
Sbjct: 245 MLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNK 304
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
AL L M I P+ + Y +LIDGL + G + LDEM G D++ Y
Sbjct: 305 PLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTV 364
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ +DK + +++ KG P++ TYN ++ GLC G ++A + +++ +G
Sbjct: 365 MITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRG 424
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 219
N N Y+T+++ L K G EA ++ +M G
Sbjct: 425 CNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 100 bits (250), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 94/181 (51%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M + G P+ TYN L+ N+ A N M ++G+ P VL Y+ +I+GL +
Sbjct: 280 MARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGN 339
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ L +M P+ + Y +I G +G++ A E+ EM V+GQ ++ TYNS
Sbjct: 340 LEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNS 399
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ LC + L+K++ +G P+ Y+ L+ L K G++ +A++V +++ KKG
Sbjct: 400 MIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Query: 185 Y 185
+
Sbjct: 460 H 460
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 69/116 (59%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+K G +P+VV Y ++ GY + E++KA+ +F MT G P+V +Y+ MI GLC
Sbjct: 350 MVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGE 409
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
EA LLK+M S PN + Y++L+ L K GK+S A +++ EM +G ++
Sbjct: 410 FREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLV 465
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 100/234 (42%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALN 70
+ V +Y+ LM + E + + M Q G +++++I + + +A+
Sbjct: 146 RHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVV 205
Query: 71 LLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 130
+ + P +YN++++ L + + +M G D++TYN L
Sbjct: 206 QFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNY 265
Query: 131 KGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 190
+ +D+ L ++ G PD TYNILL L K + A + + G + +
Sbjct: 266 RLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVL 325
Query: 191 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
Y T+I+GL + G + + +M GC D + + +I+ GE DKA+
Sbjct: 326 HYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAK 379
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M M +G PNV TYNS++ G C+ E +A + M G P+ + YS +++ L
Sbjct: 381 MFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLR 440
Query: 61 KMKMVNEALNLLKQM----HSEKIIPNTITYN 88
K ++EA ++++M H ++P + Y
Sbjct: 441 KAGKLSEARKVIREMVKKGHYVHLVPKMMKYR 472
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 112/195 (57%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
ML+ + ++GV + + YN++ + +++ +F M + G PD+ +Y+I+I
Sbjct: 429 MLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFG 488
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++ V+EA+N+ +++ P+ I+YNSLI+ L K G V A EM +G D++
Sbjct: 489 RVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVV 548
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY++ ++ K V+ +L ++++ KG QP++ TYNILLD L K GR +A +++ +
Sbjct: 549 TYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKM 608
Query: 181 FKKGYNLNNWTYNTM 195
++G ++ TY +
Sbjct: 609 KQQGLTPDSITYTVL 623
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 118/221 (53%)
Query: 10 VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEAL 69
VK +Y S+++ C + +A + + + + GV D + Y+ + + L K+K ++
Sbjct: 403 VKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIH 462
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
+L ++M + P+ TYN LI + G+V A + +E+ DII+YNS ++ L
Sbjct: 463 DLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCL 522
Query: 130 CKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 189
K VD+ K++ +KG+ PD+ TY+ L++ K R++ A +F+++ KG N
Sbjct: 523 GKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNI 582
Query: 190 WTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETI 230
TYN +++ L K G EA+ L SKM+ G D IT+ +
Sbjct: 583 VTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 121/238 (50%), Gaps = 6/238 (2%)
Query: 6 MKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMV 65
M QG+ Y+ L+ + V++A +F M V + SY M+ LC
Sbjct: 370 MTQGI------YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKT 423
Query: 66 NEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 125
EA+ +L ++H + ++ +T+ YN++ L K ++S+ +L ++M G DI TYN
Sbjct: 424 IEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNIL 483
Query: 126 LDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 185
+ + + VD+ I + +++ +PD+ +YN L++ L K G + +A F+++ +KG
Sbjct: 484 IASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGL 543
Query: 186 NLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
N + TY+T++ K + A +L +M GC + +T+ ++ L + G +A
Sbjct: 544 NPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEA 601
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 123/265 (46%), Gaps = 35/265 (13%)
Query: 2 LAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCK 61
L ++ K +K N TY L+ Y + +KA V+ + + G D+ +Y+++++ L K
Sbjct: 191 LRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAK 250
Query: 62 MKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 121
+ + +K+ H + + TY +I + + GK A L +EM G +++
Sbjct: 251 DEKACQVFEDMKKRHCRR---DEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVG 307
Query: 122 YNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNIL------------LDG------ 163
YN+ + L KG VDK I + ++++ G +P+ TY++L LDG
Sbjct: 308 YNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISK 367
Query: 164 --------------LCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEAL 209
L K G + +A +F D++ +Y +M+ LC G EA+
Sbjct: 368 RYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAI 427
Query: 210 TLMSKMEDNGCIHDPITFETIISAL 234
++SK+ + G + D + + T+ SAL
Sbjct: 428 EMLSKIHEKGVVTDTMMYNTVFSAL 452
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 108/214 (50%), Gaps = 6/214 (2%)
Query: 26 LVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTI 85
L + ++ +++ ++M + V ++ + +I+I + + L L+K+ + N+
Sbjct: 148 LPDRFDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRLVKKWDLKM---NSF 204
Query: 86 TYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKV 145
TY L+ ++ S A+++ E+ G DI YN LDAL K +K + + +
Sbjct: 205 TYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKACQVFEDM 261
Query: 146 IDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLF 205
+ + D TY I++ + + G+ +A +F ++ +G LN YNT++ L K +
Sbjct: 262 KKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMV 321
Query: 206 DEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
D+A+ + S+M + GC + T+ +++ L +G+
Sbjct: 322 DKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQ 355
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 120 ITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
TY L A + K + ++ G + D+ YN+LLD L K + A +VF+D
Sbjct: 204 FTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAK---DEKACQVFED 260
Query: 180 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
+ K+ + +TY MI + + G DEA+ L ++M G + + + T++ L +
Sbjct: 261 MKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKM 320
Query: 240 NDKA 243
DKA
Sbjct: 321 VDKA 324
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 117/212 (55%), Gaps = 4/212 (1%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
GVK +VV+Y+S++ Y +NK +F+ M + + PD Y+ +++ L K V+EA
Sbjct: 297 GVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEA 356
Query: 69 LNLLKQMHSEK-IIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 127
NL+K M EK I PN +TYNSLI LCK K A ++ DEM +G I TY++F+
Sbjct: 357 RNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMR 416
Query: 128 ALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
L G V + +A ++K+ G +P + TY +L+ LC+ + ++ ++ +K
Sbjct: 417 ILRTGEEVFELLAKMRKM---GCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGP 473
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 219
+ +Y MI+GL G +EA +M+D G
Sbjct: 474 DLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKG 505
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 120/233 (51%), Gaps = 11/233 (4%)
Query: 16 TYNSLMDGYC-LVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQ 74
++N +++G+C ++ +A+ V+ M +GV DV+SYS MI+ K +N+ L L +
Sbjct: 268 SFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDR 327
Query: 75 MHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEM-HVRGQPADIITYNSFLDALCKGH 133
M E I P+ YN+++ L K VS A L+ M +G +++TYNS + LCK
Sbjct: 328 MKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKAR 387
Query: 134 HVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ---DLFKKGYNLNNW 190
++ + ++++KG+ P + TY+ + L + +EVF+ + K G
Sbjct: 388 KTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL------RTGEEVFELLAKMRKMGCEPTVE 441
Query: 191 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
TY +I LC+ FD L L +M++ D ++ +I LF G+ ++A
Sbjct: 442 TYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEA 494
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 122/259 (47%), Gaps = 45/259 (17%)
Query: 12 PNVVTYNSLM---DGYCLVNEVNKAQAVFNTMT----QMGV------------------- 45
P++V +L+ YC V++V KA F+ +MG+
Sbjct: 192 PSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDA 251
Query: 46 ----------FP-DVLSYSIMINGLCK-MKMVNEALNLLKQMHSEKIIPNTITYNSLIDG 93
+P D S++I++NG C + EA + +M + + + ++Y+S+I
Sbjct: 252 GHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISC 311
Query: 94 LCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKV-IDKGIQP 152
K G ++ +L D M D YN+ + AL K V + L+K + +KGI+P
Sbjct: 312 YSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEP 371
Query: 153 DMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLM 212
++ TYN L+ LCK + ++A++VF ++ +KG TY+ + L + G +E L+
Sbjct: 372 NVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL-RTG--EEVFELL 428
Query: 213 SKMEDNGCIHDPITFETII 231
+KM GC +P T ET I
Sbjct: 429 AKMRKMGC--EP-TVETYI 444
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 76/147 (51%), Gaps = 3/147 (2%)
Query: 7 KQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVN 66
++G++PNVVTYNSL+ C + +A+ VF+ M + G+FP + +Y + L + V
Sbjct: 366 EKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVF 425
Query: 67 EALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 126
E L +++M E P TY LI LC+ N L DEM + D+ +Y +
Sbjct: 426 ELLAKMRKMGCE---PTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMI 482
Query: 127 DALCKGHHVDKGIALIKKVIDKGIQPD 153
L +++ K++ DKG++P+
Sbjct: 483 HGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 110/268 (41%), Gaps = 43/268 (16%)
Query: 7 KQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYS----IMINGLCKM 62
+QG +V Y+S++ ++ ++ K + + +M F L S IMI C +
Sbjct: 154 QQGYVRSVREYHSMIS---ILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAV 210
Query: 63 KMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLD-------------- 108
V +A+N K+ + SL+ LC+ VS+A L+
Sbjct: 211 HDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFN 270
Query: 109 ---------------------EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVID 147
EM G D+++Y+S + KG ++K + L ++
Sbjct: 271 IVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKK 330
Query: 148 KGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL-FKKGYNLNNWTYNTMINGLCKEGLFD 206
+ I+PD YN ++ L K + +A+ + + + +KG N TYN++I LCK +
Sbjct: 331 ECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTE 390
Query: 207 EALTLMSKMEDNGCIHDPITFETIISAL 234
EA + +M + G T+ + L
Sbjct: 391 EAKQVFDEMLEKGLFPTIRTYHAFMRIL 418
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+LA M K G +P V TY L+ C + + +++ M + V PD+ SY +MI+GL
Sbjct: 427 LLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLF 486
Query: 61 KMKMVNEALNLLKQMHSEKIIPN 83
+ EA K+M + + PN
Sbjct: 487 LNGKIEEAYGYYKEMKDKGMRPN 509
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 111/217 (51%), Gaps = 1/217 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
L M+ G P + T + L C ++ + + ++ G F ++ SYS+MI+ LC
Sbjct: 349 FLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLC 408
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K V E+ L++M E + P+ YN+LI+ CK + A +L DEM V G ++
Sbjct: 409 KAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLT 468
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN + L + ++ + L K++++GI+PD Y L++GLCK +I+ A EVF+
Sbjct: 469 TYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKC 528
Query: 181 FKKGY-NLNNWTYNTMINGLCKEGLFDEALTLMSKME 216
++ + + + + LC G EA L+ + E
Sbjct: 529 MERDHKTVTRRVLSEFVLNLCSNGHSGEASQLLRERE 565
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 113/261 (43%), Gaps = 40/261 (15%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA-- 68
KP+ + Y + + + + + + Q V ++GV P Y I L K + EA
Sbjct: 255 KPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKE 314
Query: 69 --------------------------------LNLLKQMHSEKIIPNTITYNSLIDGLCK 96
+ L M S +P T + L LC+
Sbjct: 315 VAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCR 374
Query: 97 TGKVSN---AWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPD 153
K + A+ELL +G +++ +Y+ + LCK V + ++++ +G+ PD
Sbjct: 375 HDKSDHLIKAYELLSS---KGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPD 431
Query: 154 MCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMS 213
+ YN L++ CK I+ A++++ ++F +G +N TYN +I L +EG +E+L L
Sbjct: 432 VSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFD 491
Query: 214 KMEDNGCIHDPITFETIISAL 234
KM + G D + ++I L
Sbjct: 492 KMLERGIEPDETIYMSLIEGL 512
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 96/235 (40%), Gaps = 5/235 (2%)
Query: 6 MKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQM-GVFPDVLSYSIMINGLCKMKM 64
+ + P++V ++D + L+N + A FN Q G D +SY + L +
Sbjct: 41 FRHSISPSLVA--RVIDPF-LLNHHSLALGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQ 97
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ L KQ+ S KI+ ++ Y SLID L K +A+ +L+E GQ N
Sbjct: 98 FSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNR 157
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
L L D L K+ KG+ + + + + C+ + ++ K
Sbjct: 158 LLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKAN 217
Query: 185 YNLNNWTYNTMI-NGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
N+N +I + LCK +A ++ ++ + C D + + I A G
Sbjct: 218 LNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTG 272
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 96/231 (41%), Gaps = 17/231 (7%)
Query: 8 QGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNE 67
Q + P+V N L+ G + AQ +F M GV + L + + I C+ N+
Sbjct: 148 QEIHPDVC--NRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQ 205
Query: 68 ALNLLKQMHSEKI-IPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 126
L L+ ++ + I +I ++ LCK + +A+ +L+E+ D + Y
Sbjct: 206 LLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIA 265
Query: 127 DALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 186
+A ++ + ++KK G+ P Y + L R+ +A+EV + + +
Sbjct: 266 EAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFP 325
Query: 187 LNNWTYNTMINGLCK-------EGLFD-------EALTLMSKMEDNGCIHD 223
++N + +I + E L A+ +SK+ N C HD
Sbjct: 326 MDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHD 376
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 114/234 (48%), Gaps = 1/234 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ QG+KP++V +N +++G + + A +F+ M G P+V SY+IMI CK
Sbjct: 324 MIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSS 383
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ A+ M + P+ Y LI G K+ +ELL EM +G P D TYN+
Sbjct: 384 METAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 443
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ + + + K+I I+P + T+N+++ + + V++++ KKG
Sbjct: 444 LIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKG 503
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
++ +Y +I GL EG EA + +M D G + P+ +A F +G
Sbjct: 504 ICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKG-MKTPLIDYNKFAADFHRG 556
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 8/164 (4%)
Query: 83 NTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF---LDALCKGHHVDKGI 139
++ TYNS++ L KT + +L+EM +G ++T +F + A K +
Sbjct: 194 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKG----LLTMETFTIAMKAFAAAKERKKAV 249
Query: 140 ALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGL 199
+ + + + + T N LLD L + K+AQ +F D K+ + N TY ++NG
Sbjct: 250 GIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLF-DKLKERFTPNMMTYTVLLNGW 308
Query: 200 CKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
C+ EA + + M D G D + ++ L + A
Sbjct: 309 CRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDA 352
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ ++P++ T+N +M Y + +AV+ M + G+ PD SY+++I GL
Sbjct: 464 MIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGK 523
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQ 115
EA L++M + + I YN + G+ E+ +E+ R +
Sbjct: 524 SREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQP----EIFEELAQRAK 570
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 85/141 (60%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ + P +TYNS++DG+C + V+ A+ + ++M G PDV+++S +ING CK K
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V+ + + +MH I+ NT+TY +LI G C+ G + A +LL+EM G D IT++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 125 FLDALCKGHHVDKGIALIKKV 145
L LC + K A+++ +
Sbjct: 121 MLAGLCSKKELRKAFAILEDL 141
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 83/143 (58%)
Query: 40 MTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGK 99
M + +FP ++Y+ MI+G CK V++A +L M S+ P+ +T+++LI+G CK +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 100 VSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNI 159
V N E+ EMH RG A+ +TY + + C+ +D L+ ++I G+ PD T++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 160 LLDGLCKCGRIKDAQEVFQDLFK 182
+L GLC ++ A + +DL K
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQK 143
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 78/137 (56%)
Query: 80 IIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGI 139
I P TITYNS+IDG CK +V +A +LD M +G D++T+++ ++ CK VD G+
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 140 ALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGL 199
+ ++ +GI + TY L+ G C+ G + AQ++ ++ G + T++ M+ GL
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 125
Query: 200 CKEGLFDEALTLMSKME 216
C + +A ++ ++
Sbjct: 126 CSKKELRKAFAILEDLQ 142
Score = 90.5 bits (223), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 70/124 (56%)
Query: 120 ITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
ITYNS +D CK VD ++ + KG PD+ T++ L++G CK R+ + E+F +
Sbjct: 11 ITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 70
Query: 180 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
+ ++G N TY T+I+G C+ G D A L+++M G D ITF +++ L K E
Sbjct: 71 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKE 130
Query: 240 NDKA 243
KA
Sbjct: 131 LRKA 134
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 69/111 (62%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
ML M +G P+VVT+++L++GYC V+ +F M + G+ + ++Y+ +I+G C
Sbjct: 32 MLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFC 91
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMH 111
++ ++ A +LL +M S + P+ IT++ ++ GLC ++ A+ +L+++
Sbjct: 92 QVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQ 142
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%)
Query: 149 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 208
I P TYN ++DG CK R+ DA+ + + KG + + T++T+ING CK D
Sbjct: 5 SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNG 64
Query: 209 LTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ + +M G + + +T+ T+I + G+ D A+
Sbjct: 65 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQ 100
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M ++G+ N VTY +L+ G+C V +++ AQ + N M GV PD +++ M+ GLC K
Sbjct: 71 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKE 130
Query: 65 VNEALNLLKQMHSEK 79
+ +A +L+ + +
Sbjct: 131 LRKAFAILEDLQKSE 145
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 121/232 (52%), Gaps = 5/232 (2%)
Query: 11 KPNVVTYNSLMDGYCLV--NEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
+P T+ L+ C + ++ V N M G+ PD ++ I + LC+ V+EA
Sbjct: 119 RPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEA 178
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMH--VRGQPADIITYNSFL 126
+L+K++ + P+T TYN L+ LCK + +E +DEM +P D++++ +
Sbjct: 179 KDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKP-DLVSFTILI 237
Query: 127 DALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 186
D +C ++ + + L+ K+ + G +PD YN ++ G C + +A V++ + ++G
Sbjct: 238 DNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVE 297
Query: 187 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
+ TYNT+I GL K G +EA + M D G D T+ ++++ + KG
Sbjct: 298 PDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 111/204 (54%), Gaps = 1/204 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L +M+ G++P+ VT + + C V++A+ + +T+ PD +Y+ ++ LC
Sbjct: 146 VLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLC 205
Query: 61 KMKMVNEALNLLKQMHSE-KIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADI 119
K K ++ + +M + + P+ +++ LID +C + + A L+ ++ G D
Sbjct: 206 KCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDC 265
Query: 120 ITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
YN+ + C + + + KK+ ++G++PD TYN L+ GL K GR+++A+ +
Sbjct: 266 FLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKT 325
Query: 180 LFKKGYNLNNWTYNTMINGLCKEG 203
+ GY + TY +++NG+C++G
Sbjct: 326 MVDAGYEPDTATYTSLMNGMCRKG 349
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 121/240 (50%), Gaps = 19/240 (7%)
Query: 17 YNSLMDGYCLVNEVNKAQAVFNTM--TQMGVFPDVLSYSIMINGLCK-----MKMVNEAL 69
+NS++ Y + VN +F + +Q P ++ I+++ C+ + V+ L
Sbjct: 88 HNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVL 147
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
NL M + + P+ +T + + LC+TG+V A +L+ E+ + P D TYN L L
Sbjct: 148 NL---MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHL 204
Query: 130 CKGHHVDKGIALIKKVIDK-----GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
CK K + ++ + +D+ ++PD+ ++ IL+D +C +++A + L G
Sbjct: 205 CKC----KDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAG 260
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ + + YNT++ G C EA+ + KM++ G D IT+ T+I L + G ++A
Sbjct: 261 FKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEAR 320
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 114 bits (285), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 129/236 (54%), Gaps = 1/236 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQM-GVFPDVLSYSIMINGLCKMK 63
M+K+ VKP VT+ +L+ G C + V +A + + M ++ GV P V Y+ +I LC++
Sbjct: 178 MVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIG 237
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
++ A L + + KI + Y++LI L K G+ + +L+EM +G D +TYN
Sbjct: 238 ELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYN 297
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
++ C + + ++ ++++KG++PD+ +YN++L + + ++A +F+D+ ++
Sbjct: 298 VLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRR 357
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
G + + +Y + +GLC+ F+EA ++ +M G E + L E G+
Sbjct: 358 GCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGK 413
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 118/234 (50%), Gaps = 1/234 (0%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALN 70
KP+ TYN L+ G + A +F+ M + V P +++ +I+GLCK V EAL
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALK 208
Query: 71 LLKQM-HSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
+ M + P Y SLI LC+ G++S A++L DE + D Y++ + +L
Sbjct: 209 MKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSL 268
Query: 130 CKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 189
K ++ +++++ +KG +PD TYN+L++G C + A V ++ +KG +
Sbjct: 269 IKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDV 328
Query: 190 WTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+YN ++ + ++EA L M GC D +++ + L E + ++A
Sbjct: 329 ISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEA 382
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 4/207 (1%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
GV+P V Y SL+ C + E++ A + + + + D YS +I+ L K NE
Sbjct: 218 GVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEV 277
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
+L++M + P+T+TYN LI+G C +A +LDEM +G D+I+YN L
Sbjct: 278 SMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGV 337
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
+ ++ L + + +G PD +Y I+ DGLC+ + ++A + ++ KGY
Sbjct: 338 FFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPR 397
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKM 215
+ LC+ G L ++SK+
Sbjct: 398 RDRLEGFLQKLCESG----KLEILSKV 420
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 106/209 (50%), Gaps = 2/209 (0%)
Query: 29 EVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYN 88
E+ K + +++ + G PD +Y+I+I+G + ++AL L +M +K+ P +T+
Sbjct: 133 ELEKMKERLSSIDEFGK-PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFG 191
Query: 89 SLIDGLCKTGKVSNAWELLDEM-HVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVID 147
+LI GLCK +V A ++ +M V G + Y S + ALC+ + L + +
Sbjct: 192 TLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYE 251
Query: 148 KGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDE 207
I+ D Y+ L+ L K GR + + +++ +KG + TYN +ING C E +
Sbjct: 252 GKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSES 311
Query: 208 ALTLMSKMEDNGCIHDPITFETIISALFE 236
A ++ +M + G D I++ I+ F
Sbjct: 312 ANRVLDEMVEKGLKPDVISYNMILGVFFR 340
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 95/176 (53%), Gaps = 7/176 (3%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M ++G KP+ VTYN L++G+C+ N+ A V + M + G+ PDV+SY++++
Sbjct: 280 ILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFF 339
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++K EA L + M P+T++Y + DGLC+ + A +LDEM +G
Sbjct: 340 RIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRD 399
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVID---KGIQPDMCTYNILLDGLCKCGRIKDA 173
FL LC+ ++ ++ KVI +GI D +++++ +CK I D+
Sbjct: 400 RLEGFLQKLCESGKLE----ILSKVISSLHRGIAGDADVWSVMIPTMCKEPVISDS 451
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 99/203 (48%), Gaps = 1/203 (0%)
Query: 10 VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEAL 69
+K + Y++L+ N+ + M++ G PD ++Y+++ING C A
Sbjct: 254 IKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESAN 313
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
+L +M + + P+ I+YN ++ + K A L ++M RG D ++Y D L
Sbjct: 314 RVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGL 373
Query: 130 CKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 189
C+G ++ ++ +++ KG +P L LC+ G+++ +V L +G +
Sbjct: 374 CEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSL-HRGIAGDA 432
Query: 190 WTYNTMINGLCKEGLFDEALTLM 212
++ MI +CKE + +++ L+
Sbjct: 433 DVWSVMIPTMCKEPVISDSIDLL 455
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 97/193 (50%), Gaps = 3/193 (1%)
Query: 49 VLSYSIMINGLCKMKMVNEALNLLKQMHSE-KIIPNTITYNSLIDGLCKTGKVSNAWELL 107
+L Y I+I L KM +E +L + ++ +I+P I + ++I+ + S A +
Sbjct: 47 LLCYDIIITKLGGSKMFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMF 106
Query: 108 DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKC 167
DEM + + NS L AL K ++K + ID+ +PD CTYNIL+ G +
Sbjct: 107 DEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSS-IDEFGKPDACTYNILIHGCSQS 165
Query: 168 GRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPI-T 226
G DA ++F ++ KK T+ T+I+GLCK+ EAL + M + +
Sbjct: 166 GCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHI 225
Query: 227 FETIISALFEKGE 239
+ ++I AL + GE
Sbjct: 226 YASLIKALCQIGE 238
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 98/210 (46%), Gaps = 2/210 (0%)
Query: 34 QAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDG 93
Q + + T + P + + +IN + K+ + AL++ +M + + NSL+
Sbjct: 68 QVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSA 127
Query: 94 LCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPD 153
L K G++ E L + G+P D TYN + + D + L +++ K ++P
Sbjct: 128 LLKCGELEKMKERLSSIDEFGKP-DACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPT 186
Query: 154 MCTYNILLDGLCKCGRIKDAQEVFQDLFK-KGYNLNNWTYNTMINGLCKEGLFDEALTLM 212
T+ L+ GLCK R+K+A ++ D+ K G Y ++I LC+ G A L
Sbjct: 187 GVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLK 246
Query: 213 SKMEDNGCIHDPITFETIISALFEKGENDK 242
+ + D + T+IS+L + G +++
Sbjct: 247 DEAYEGKIKVDAAIYSTLISSLIKAGRSNE 276
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 125/247 (50%), Gaps = 6/247 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ M+ +G+KPN+V+YN+LM Y + A +V + Q G+ PDV+SY+ ++N
Sbjct: 210 VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYG 269
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + +A + M E+ PN +TYN+LID G ++ A E+ +M G +++
Sbjct: 270 RSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVV 329
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
+ + L A + ++ +GI + YN + ++ A ++Q +
Sbjct: 330 SVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSM 389
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPIT---FETIISALFEK 237
KK ++ T+ +I+G C+ + EA++ + +MED + P+T + +++ A ++
Sbjct: 390 RKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMED---LSIPLTKEVYSSVLCAYSKQ 446
Query: 238 GENDKAE 244
G+ +AE
Sbjct: 447 GQVTEAE 453
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 107/222 (48%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALN 70
+P+VVT+ S+M Y + E+ +AVF M G+ P+++SY+ ++ M AL+
Sbjct: 185 RPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALS 244
Query: 71 LLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 130
+L + IIP+ ++Y L++ ++ + A E+ M + +++TYN+ +DA
Sbjct: 245 VLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYG 304
Query: 131 KGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 190
+ + + + +++ GI+P++ + LL + + + V +G NLN
Sbjct: 305 SNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTA 364
Query: 191 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIIS 232
YN+ I ++A+ L M D +TF +IS
Sbjct: 365 AYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILIS 406
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 116/231 (50%), Gaps = 2/231 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M GV P++VT+N ++ Y + +KA + F M V PD +++I+I L K+
Sbjct: 107 MTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQ 166
Query: 65 VNEALNLLKQMHSEKI--IPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 122
++AL+L M ++ P+ +T+ S++ G++ N + + M G +I++Y
Sbjct: 167 SSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSY 226
Query: 123 NSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 182
N+ + A ++++ + GI PD+ +Y LL+ + + A+EVF + K
Sbjct: 227 NALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRK 286
Query: 183 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
+ N TYN +I+ G EA+ + +ME +G + ++ T+++A
Sbjct: 287 ERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA 337
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 106/235 (45%), Gaps = 1/235 (0%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
+M K+ KPNVVTYN+L+D Y + +A +F M Q G+ P+V+S ++ + K
Sbjct: 283 MMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSK 342
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
+L S I NT YNS I ++ A L M + AD +T+
Sbjct: 343 KKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFT 402
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ C+ + I+ +K++ D I Y+ +L K G++ +A+ +F +
Sbjct: 403 ILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMA 462
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
G + Y +M++ + +A L +ME NG D I ++ A F KG
Sbjct: 463 GCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRA-FNKG 516
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 115/265 (43%), Gaps = 37/265 (13%)
Query: 17 YNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMH 76
YN ++ + N V++A+ +F M + PD +Y +IN + A+NL+ M
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 77 SEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVD 136
I P+ TYN+LI+ +G A E+ +M G D++T+N L A G
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 137 KGIALIKKVIDKGIQPDMCTYNILLDGLCKCGR--------------------------- 169
K ++ + + ++PD T+NI++ L K G+
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 193
Query: 170 ----------IKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 219
I++ + VF+ + +G N +YN ++ G+ AL+++ ++ NG
Sbjct: 194 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 253
Query: 220 CIHDPITFETIISALFEKGENDKAE 244
I D +++ ++++ + KA+
Sbjct: 254 IIPDVVSYTCLLNSYGRSRQPGKAK 278
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 84/169 (49%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L+ +G+ N YNS + Y E+ KA A++ +M + V D ++++I+I+G C
Sbjct: 350 VLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSC 409
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+M EA++ LK+M I Y+S++ K G+V+ A + ++M + G D+I
Sbjct: 410 RMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVI 469
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGR 169
Y S L A K L ++ GI+PD + L+ K G+
Sbjct: 470 AYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQ 518
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 106/248 (42%), Gaps = 38/248 (15%)
Query: 17 YNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMH 76
Y+S++ Y +V +A+++FN M G PDV++Y+ M++ + +A L +M
Sbjct: 436 YSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEME 495
Query: 77 SEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQP-------------------- 116
+ I P++I ++L+ K G+ SN + L+D M + P
Sbjct: 496 ANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWK 555
Query: 117 --ADIITY-------------NSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILL 161
D+I N L K V+ + L K+I G+ ++ TY ILL
Sbjct: 556 RAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILL 615
Query: 162 DGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMIN-GLCKEGLFDEALTL--MSKMEDN 218
+ L G + EV + + G +N Y +I+ G G+ E L + +M +
Sbjct: 616 EHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFGERSAGIEFEPLIRQKLGEMREE 675
Query: 219 GCIHDPIT 226
I+D +T
Sbjct: 676 CKINDSVT 683
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 114 bits (284), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 121/226 (53%), Gaps = 3/226 (1%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G NV T+N ++ +C +++ +A +VF M + GV+P+V+S+++MI+G CK + A
Sbjct: 213 GYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFA 272
Query: 69 LNLLKQM---HSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 125
L LL +M + PN +TYNS+I+G CK G++ A + +M G + TY +
Sbjct: 273 LQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGAL 332
Query: 126 LDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 185
+DA + D+ + L ++ KG+ + YN ++ L G I+ A V +D+ K
Sbjct: 333 VDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNM 392
Query: 186 NLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 231
++ +T ++ GLC+ G EA+ ++ + + D + T++
Sbjct: 393 QIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLM 438
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 124/243 (51%)
Query: 2 LAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCK 61
+ +M V PN VTYNS+++G+C ++ A+ + M + GV + +Y +++ +
Sbjct: 279 MGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGR 338
Query: 62 MKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 121
+EAL L +M S+ ++ NT+ YNS++ L G + A +L +M+ + D T
Sbjct: 339 AGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFT 398
Query: 122 YNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF 181
+ LC+ +V + + +++ +K + D+ +N L+ + ++ A ++ +
Sbjct: 399 QAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSML 458
Query: 182 KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
+G +L+ ++ T+I+G KEG + AL + M + + + +I++ L ++G
Sbjct: 459 VQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAG 518
Query: 242 KAE 244
AE
Sbjct: 519 AAE 521
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 123/242 (50%), Gaps = 3/242 (1%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMG---VFPDVLSYSIMINGLCK 61
M+K GV PNVV++N ++DG C ++ A + M M V P+ ++Y+ +ING CK
Sbjct: 244 MLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCK 303
Query: 62 MKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 121
++ A + M + N TY +L+D + G A L DEM +G + +
Sbjct: 304 AGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVI 363
Query: 122 YNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF 181
YNS + L ++ +++++ + K +Q D T I++ GLC+ G +K+A E + +
Sbjct: 364 YNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQIS 423
Query: 182 KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
+K + +NT+++ ++ A ++ M G D I+F T+I ++G+ +
Sbjct: 424 EKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLE 483
Query: 242 KA 243
+A
Sbjct: 484 RA 485
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 132/276 (47%), Gaps = 43/276 (15%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M +G+ N V YNS++ + ++ A +V M + D + +I++ GLC+
Sbjct: 352 MTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGY 411
Query: 65 VNEALNLLKQMHSEKIIPN-----------------------------------TITYNS 89
V EA+ +Q+ +K++ + I++ +
Sbjct: 412 VKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGT 471
Query: 90 LIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKG 149
LIDG K GK+ A E+ D M + ++++ YNS ++ L K +G+A + +
Sbjct: 472 LIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSK-----RGMAGAAEAVVNA 526
Query: 150 IQ-PDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG--YNLNNWTYNTMINGLCKEGLFD 206
++ D+ TYN LL+ K G +++A ++ + K+ +++ T+N MIN LCK G ++
Sbjct: 527 MEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYE 586
Query: 207 EALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 242
+A ++ M + G + D IT+ T+I++ + +K
Sbjct: 587 KAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEK 622
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 114/234 (48%), Gaps = 3/234 (1%)
Query: 8 QGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNE 67
+G +V N+ M VNE+++ V+ M +G +V +++++I CK + E
Sbjct: 177 EGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFE 236
Query: 68 ALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQ---PADIITYNS 124
AL++ +M + PN +++N +IDG CKTG + A +LL +M + + +TYNS
Sbjct: 237 ALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNS 296
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++ CK +D + ++ G+ + TY L+D + G +A + ++ KG
Sbjct: 297 VINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKG 356
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
+N YN+++ L EG + A++++ M D T ++ L G
Sbjct: 357 LVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNG 410
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 110/238 (46%), Gaps = 5/238 (2%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G P+V ++SL+ + A V G V + + + L + ++
Sbjct: 145 GSSPDV--FDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRF 202
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
+ K+M S + N T+N +I CK K+ A + M G +++++N +D
Sbjct: 203 WKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDG 262
Query: 129 LCKGHHVDKGIALIKK---VIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 185
CK + + L+ K + + P+ TYN +++G CK GR+ A+ + D+ K G
Sbjct: 263 ACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGV 322
Query: 186 NLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ N TY +++ + G DEAL L +M G + + + + +I+ LF +G+ + A
Sbjct: 323 DCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGA 380
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 105/201 (52%), Gaps = 6/201 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M+ QG+ + +++ +L+DGY ++ +A +++ M +M +++ Y+ ++NGL
Sbjct: 453 ILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLS 512
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRG--QPAD 118
K M A ++ M I + +TYN+L++ KTG V A ++L +M + +
Sbjct: 513 KRGMAGAAEAVVNAME----IKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVS 568
Query: 119 IITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 178
++T+N ++ LCK +K ++K ++++G+ PD TY L+ K + E+
Sbjct: 569 LVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHD 628
Query: 179 DLFKKGYNLNNWTYNTMINGL 199
L +G + Y +++ L
Sbjct: 629 YLILQGVTPHEHIYLSIVRPL 649
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 115/232 (49%), Gaps = 7/232 (3%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
++V +N+LM + ++ A + +M G+ D +S+ +I+G K + AL +
Sbjct: 430 DIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIY 489
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 132
M N + YNS+++GL K G A +++ M ++ DI+TYN+ L+ K
Sbjct: 490 DGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIK----DIVTYNTLLNESLKT 545
Query: 133 HHVDKGIALIKKVI--DKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 190
+V++ ++ K+ D + T+NI+++ LCK G + A+EV + + ++G ++
Sbjct: 546 GNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSI 605
Query: 191 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 242
TY T+I K ++ + L + G + +I+ L ++ EN +
Sbjct: 606 TYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVRPLLDR-ENGR 656
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 54 IMINGLCKMKMVNEALNLLKQMHS---EKIIPNTI----------------TYNSLIDGL 94
+MI+ L + ++AL+++ + S EK+ P + ++SL+
Sbjct: 99 VMIHLLVGSRRFDDALSIMANLMSVEGEKLSPLHVLSGLIRSYQACGSSPDVFDSLVRAC 158
Query: 95 CKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDM 154
+ G A+E++++ G + N+F+ L + +D+ + K++ G ++
Sbjct: 159 TQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENV 218
Query: 155 CTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSK 214
T+N+++ CK ++ +A VF + K G N ++N MI+G CK G AL L+ K
Sbjct: 219 NTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGK 278
Query: 215 ---MEDNGCIHDPITFETIISALFEKGENDKAE 244
M N + +T+ ++I+ + G D AE
Sbjct: 279 MGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAE 311
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 114 bits (284), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 116/236 (49%), Gaps = 5/236 (2%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAV--FNTMTQMGVFPDVLSYSIMINGLCKM 62
M+ G+KP++V +N +++G L+ + K+ A+ F+ M G P+V SY+IMI CK
Sbjct: 323 MIDHGLKPDIVAHNVMLEG--LLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQ 380
Query: 63 KMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 122
+ A+ M + P+ Y LI G K+ +ELL EM +G P D TY
Sbjct: 381 SSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTY 440
Query: 123 NSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 182
N+ + + + G + K+I I+P + T+N+++ + + V+ ++ K
Sbjct: 441 NALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIK 500
Query: 183 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
KG ++ +Y +I GL EG EA + +M D G + P+ +A F +G
Sbjct: 501 KGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKG-MKTPLIDYNKFAADFHRG 555
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 3/210 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ VM +G PNV +Y ++ +C + + A F+ M G+ PD Y+ +I G
Sbjct: 354 LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFG 413
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K ++ LLK+M + P+ TYN+LI + + + ++M I
Sbjct: 414 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIH 473
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
T+N + + + + G A+ ++I KGI PD +Y +L+ GL G+ ++A +++
Sbjct: 474 TFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEM 533
Query: 181 FKKGYNLNNWTYNTMINGLCKEG---LFDE 207
KG YN + G +F+E
Sbjct: 534 LDKGMKTPLIDYNKFAADFHRGGQPEIFEE 563
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 8/157 (5%)
Query: 83 NTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF---LDALCKGHHVDKGI 139
++ TYNS++ L KT + +L+EM +G ++T +F + A K +
Sbjct: 193 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKG----LLTMETFTIAMKAFAAAKERKKAV 248
Query: 140 ALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGL 199
+ + + + + T N LLD L + K+AQ +F D K+ + N TY ++NG
Sbjct: 249 GIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLF-DKLKERFTPNMMTYTVLLNGW 307
Query: 200 CKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFE 236
C+ EA + + M D+G D + ++ L
Sbjct: 308 CRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLR 344
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ ++P++ T+N +M Y + +AV++ M + G+ PD SY+++I GL
Sbjct: 463 MIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGK 522
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQ 115
EA L++M + + I YN + G+ E+ +E+ R +
Sbjct: 523 SREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQP----EIFEELAQRAK 569
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 113 bits (283), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 123/239 (51%), Gaps = 1/239 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
++ +M + V+ ++ T+ L+ Y ++A FN M G PD +++SI+I+ L
Sbjct: 173 LIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLS 232
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + +EA + + ++ P+ I Y +L+ G C+ G++S A ++ EM + G ++
Sbjct: 233 RKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVY 291
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY+ +DALC+ + + + ++D G P+ T+N L+ K GR + +V+ +
Sbjct: 292 TYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQM 351
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
K G + TYN +I C++ + A+ +++ M C + TF TI + +K +
Sbjct: 352 KKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRD 410
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 108/212 (50%)
Query: 6 MKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMV 65
+K +P+V+ Y +L+ G+C E+++A+ VF M G+ P+V +YSI+I+ LC+ +
Sbjct: 247 LKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQI 306
Query: 66 NEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 125
+ A ++ M PN IT+N+L+ K G+ ++ ++M G D ITYN
Sbjct: 307 SRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFL 366
Query: 126 LDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 185
++A C+ +++ + ++ +I K + + T+N + + K + A ++ + +
Sbjct: 367 IEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKC 426
Query: 186 NLNNWTYNTMINGLCKEGLFDEALTLMSKMED 217
N TYN ++ D L + +M+D
Sbjct: 427 EPNTVTYNILMRMFVGSKSTDMVLKMKKEMDD 458
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 108/226 (47%), Gaps = 1/226 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ A M+ G PN +T+N+LM + K V+N M ++G PD ++Y+ +I C
Sbjct: 312 VFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHC 371
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + + A+ +L M +K N T+N++ + K V+ A + +M + +
Sbjct: 372 RDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTV 431
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN + D + + K++ DK ++P++ TY +L+ C G +A ++F+++
Sbjct: 432 TYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEM 491
Query: 181 F-KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPI 225
+K + Y ++ L + G + L+ KM G + P+
Sbjct: 492 VEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLVARPL 537
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 77/190 (40%), Gaps = 34/190 (17%)
Query: 87 YNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVI 146
YN +ID K + AW L+D M R I T+ + + + + ++
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 147 DKG----------------------------------IQPDMCTYNILLDGLCKCGRIKD 172
D G +PD+ Y L+ G C+ G I +
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISE 273
Query: 173 AQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIIS 232
A++VF+++ G N +TY+ +I+ LC+ G A + + M D+GC + ITF ++
Sbjct: 274 AEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMR 333
Query: 233 ALFEKGENDK 242
+ G +K
Sbjct: 334 VHVKAGRTEK 343
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 113 bits (283), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 116/236 (49%), Gaps = 5/236 (2%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAV--FNTMTQMGVFPDVLSYSIMINGLCKM 62
M+ G+KP++V +N +++G L+ + K+ A+ F+ M G P+V SY+IMI CK
Sbjct: 324 MIDHGLKPDIVAHNVMLEG--LLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQ 381
Query: 63 KMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 122
+ A+ M + P+ Y LI G K+ +ELL EM +G P D TY
Sbjct: 382 SSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTY 441
Query: 123 NSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 182
N+ + + + G + K+I I+P + T+N+++ + + V+ ++ K
Sbjct: 442 NALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIK 501
Query: 183 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
KG ++ +Y +I GL EG EA + +M D G + P+ +A F +G
Sbjct: 502 KGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKG-MKTPLIDYNKFAADFHRG 556
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 3/210 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ VM +G PNV +Y ++ +C + + A F+ M G+ PD Y+ +I G
Sbjct: 355 LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFG 414
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K ++ LLK+M + P+ TYN+LI + + + ++M I
Sbjct: 415 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIH 474
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
T+N + + + + G A+ ++I KGI PD +Y +L+ GL G+ ++A +++
Sbjct: 475 TFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEM 534
Query: 181 FKKGYNLNNWTYNTMINGLCKEG---LFDE 207
KG YN + G +F+E
Sbjct: 535 LDKGMKTPLIDYNKFAADFHRGGQPEIFEE 564
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 8/154 (5%)
Query: 86 TYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF---LDALCKGHHVDKGIALI 142
TYNS++ L KT + +L+EM +G ++T +F + A K + +
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKG----LLTMETFTIAMKAFAAAKERKKAVGIF 252
Query: 143 KKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKE 202
+ + + + T N LLD L + K+AQ +F D K+ + N TY ++NG C+
Sbjct: 253 ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLF-DKLKERFTPNMMTYTVLLNGWCRV 311
Query: 203 GLFDEALTLMSKMEDNGCIHDPITFETIISALFE 236
EA + + M D+G D + ++ L
Sbjct: 312 RNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLR 345
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ ++P++ T+N +M Y + +AV++ M + G+ PD SY+++I GL
Sbjct: 464 MIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGK 523
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQ 115
EA L++M + + I YN + G+ E+ +E+ R +
Sbjct: 524 SREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQP----EIFEELAQRAK 570
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 112/230 (48%)
Query: 15 VTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQ 74
+ Y ++ G C + A++V M + G+ PDV YS +I G K + +A+++ +
Sbjct: 292 IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNK 351
Query: 75 MHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 134
M ++ N + +S++ C+ G S A++L E D + YN DAL K
Sbjct: 352 MLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGK 411
Query: 135 VDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 194
V++ I L +++ KGI PD+ Y L+ G C G+ DA ++ ++ G + YN
Sbjct: 412 VEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNV 471
Query: 195 MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ GL GL EA + ME+ G +T +I L + GE DKAE
Sbjct: 472 LAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAE 521
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 118/233 (50%), Gaps = 14/233 (6%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+++ + + P++ TY +++ YC +NE +A A+F M + V PDV++YS+++N
Sbjct: 622 FFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-- 679
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ L++ ++M + +IP+ + Y +I+ C + + L +M R D++
Sbjct: 680 -----DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVV 734
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY L + ++ ++ K D ++PD+ Y +L+D CK G + +A+ +F +
Sbjct: 735 TYTVLLK-----NKPERNLSREMKAFD--VKPDVFYYTVLIDWQCKIGDLGEAKRIFDQM 787
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
+ G + + Y +I CK G EA + +M ++G D + + +I+
Sbjct: 788 IESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAG 840
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 4/212 (1%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+K+ + N V +S++ YC + ++A +F + + D + Y++ + L K+
Sbjct: 352 MLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGK 411
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V EA+ L ++M + I P+ I Y +LI G C GK S+A++L+ EM G+ DI+ YN
Sbjct: 412 VEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNV 471
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
L + +K + ++G++P T+N++++GL G + A+ ++ L K
Sbjct: 472 LAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKS 531
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKME 216
+ +M+ G C G D A ++E
Sbjct: 532 REND----ASMVKGFCAAGCLDHAFERFIRLE 559
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 92/175 (52%), Gaps = 7/175 (4%)
Query: 10 VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEAL 69
V P+VV Y +++ YC +N++ K A+F M + + PDV++Y++++
Sbjct: 694 VIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN-------KPER 746
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
NL ++M + + P+ Y LID CK G + A + D+M G D Y + +
Sbjct: 747 NLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACC 806
Query: 130 CKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
CK ++ + + ++I+ G++PD+ Y L+ G C+ G + A ++ +++ +KG
Sbjct: 807 CKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKG 861
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 112/258 (43%), Gaps = 29/258 (11%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M +G+ P+V+ Y +L+ G CL + + A + M G PD++ Y+++ GL +
Sbjct: 422 MTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGL 481
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
EA LK M + + P +T+N +I+GL G++ A + + + + D
Sbjct: 482 AQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKG 541
Query: 125 FLDALCKGHHVDKGIAL-------------------------IKKVIDK----GIQPDMC 155
F A C H ++ I L + ++D+ G++P+
Sbjct: 542 FCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKS 601
Query: 156 TYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM 215
Y L+ C+ ++ A+E F+ L K + +TY MIN C+ +A L M
Sbjct: 602 MYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDM 661
Query: 216 EDNGCIHDPITFETIISA 233
+ D +T+ ++++
Sbjct: 662 KRRDVKPDVVTYSVLLNS 679
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 112/232 (48%), Gaps = 15/232 (6%)
Query: 2 LAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCK 61
L +M +GVKP VT+N +++G E++KA+A + ++ D + M+ G C
Sbjct: 489 LKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSREND----ASMVKGFCA 544
Query: 62 MKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLC-KTGKVSNAWELLDEMHVRGQPADII 120
++ A ++ E +P ++ Y +L LC + +S A +LLD M G +
Sbjct: 545 AGCLDHAFERFIRL--EFPLPKSV-YFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKS 601
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
Y + A C+ ++V K + ++ K I PD+ TY I+++ C+ K A +F+D+
Sbjct: 602 MYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDM 661
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIIS 232
++ + TY+ ++N D L + +ME I D + + +I+
Sbjct: 662 KRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVVYYTIMIN 706
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 102/239 (42%), Gaps = 4/239 (1%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G P++ N L+ + F + ++G+ D +Y +++ L + E
Sbjct: 177 GRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEEL 236
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMH---VRGQPADI-ITYNS 124
LL ++ + + Y + I+GLC A+ LL + + +D+ I Y
Sbjct: 237 EKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRK 296
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ LC ++ +++ + GI PD+ Y+ +++G K I A +VF + KK
Sbjct: 297 VVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKR 356
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+N ++++ C+ G F EA L + + D + + AL + G+ ++A
Sbjct: 357 KRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEA 415
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 51/86 (59%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ GV P+ Y +L+ C + + +A+ +F+ M + GV PDV+ Y+ +I G C+
Sbjct: 787 MIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGF 846
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSL 90
V +A+ L+K+M + I P + +++
Sbjct: 847 VLKAVKLVKEMLEKGIKPTKASLSAV 872
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 112 bits (281), Expect = 2e-25, Method: Composition-based stats.
Identities = 62/247 (25%), Positives = 125/247 (50%), Gaps = 6/247 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ M+ +G+KPN+V+YN+LM Y + A +V + Q G+ PDV+SY+ ++N
Sbjct: 342 VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYG 401
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + +A + M E+ PN +TYN+LID G ++ A E+ +M G +++
Sbjct: 402 RSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVV 461
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
+ + L A + ++ +GI + YN + ++ A ++Q +
Sbjct: 462 SVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSM 521
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPIT---FETIISALFEK 237
KK ++ T+ +I+G C+ + EA++ + +MED + P+T + +++ A ++
Sbjct: 522 RKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMED---LSIPLTKEVYSSVLCAYSKQ 578
Query: 238 GENDKAE 244
G+ +AE
Sbjct: 579 GQVTEAE 585
Score = 100 bits (250), Expect = 6e-22, Method: Composition-based stats.
Identities = 54/223 (24%), Positives = 107/223 (47%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALN 70
+P+VVT+ S+M Y + E+ +AVF M G+ P+++SY+ ++ M AL+
Sbjct: 317 RPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALS 376
Query: 71 LLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 130
+L + IIP+ ++Y L++ ++ + A E+ M + +++TYN+ +DA
Sbjct: 377 VLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYG 436
Query: 131 KGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 190
+ + + + +++ GI+P++ + LL + + + V +G NLN
Sbjct: 437 SNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTA 496
Query: 191 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
YN+ I ++A+ L M D +TF +IS
Sbjct: 497 AYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISG 539
Score = 99.4 bits (246), Expect = 2e-21, Method: Composition-based stats.
Identities = 59/231 (25%), Positives = 116/231 (50%), Gaps = 2/231 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M GV P++VT+N ++ Y + +KA + F M V PD +++I+I L K+
Sbjct: 239 MTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQ 298
Query: 65 VNEALNLLKQMHSEK--IIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 122
++AL+L M ++ P+ +T+ S++ G++ N + + M G +I++Y
Sbjct: 299 SSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSY 358
Query: 123 NSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 182
N+ + A ++++ + GI PD+ +Y LL+ + + A+EVF + K
Sbjct: 359 NALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRK 418
Query: 183 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
+ N TYN +I+ G EA+ + +ME +G + ++ T+++A
Sbjct: 419 ERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA 469
Score = 89.4 bits (220), Expect = 2e-18, Method: Composition-based stats.
Identities = 63/235 (26%), Positives = 106/235 (45%), Gaps = 1/235 (0%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
+M K+ KPNVVTYN+L+D Y + +A +F M Q G+ P+V+S ++ + K
Sbjct: 415 MMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSK 474
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
+L S I NT YNS I ++ A L M + AD +T+
Sbjct: 475 KKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFT 534
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ C+ + I+ +K++ D I Y+ +L K G++ +A+ +F +
Sbjct: 535 ILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMA 594
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
G + Y +M++ + +A L +ME NG D I ++ A F KG
Sbjct: 595 GCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRA-FNKG 648
Score = 84.3 bits (207), Expect = 7e-17, Method: Composition-based stats.
Identities = 59/265 (22%), Positives = 115/265 (43%), Gaps = 37/265 (13%)
Query: 17 YNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMH 76
YN ++ + N V++A+ +F M + PD +Y +IN + A+NL+ M
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 77 SEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVD 136
I P+ TYN+LI+ +G A E+ +M G D++T+N L A G
Sbjct: 206 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 265
Query: 137 KGIALIKKVIDKGIQPDMCTYNILLDGLCKCGR--------------------------- 169
K ++ + + ++PD T+NI++ L K G+
Sbjct: 266 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 325
Query: 170 ----------IKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 219
I++ + VF+ + +G N +YN ++ G+ AL+++ ++ NG
Sbjct: 326 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 385
Query: 220 CIHDPITFETIISALFEKGENDKAE 244
I D +++ ++++ + KA+
Sbjct: 386 IIPDVVSYTCLLNSYGRSRQPGKAK 410
Score = 83.2 bits (204), Expect = 1e-16, Method: Composition-based stats.
Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 1/183 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L+ +G+ N YNS + Y E+ KA A++ +M + V D ++++I+I+G C
Sbjct: 482 VLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSC 541
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+M EA++ LK+M I Y+S++ K G+V+ A + ++M + G D+I
Sbjct: 542 RMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVI 601
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
Y S L A K L ++ GI+PD + L+ K G+ + V DL
Sbjct: 602 AYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVF-VLMDL 660
Query: 181 FKK 183
++
Sbjct: 661 MRE 663
Score = 64.7 bits (156), Expect = 5e-11, Method: Composition-based stats.
Identities = 52/216 (24%), Positives = 92/216 (42%), Gaps = 35/216 (16%)
Query: 17 YNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMH 76
Y+S++ Y +V +A+++FN M G PDV++Y+ M++ + +A L +M
Sbjct: 568 YSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEME 627
Query: 77 SEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQP-------------------- 116
+ I P++I ++L+ K G+ SN + L+D M + P
Sbjct: 628 ANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWK 687
Query: 117 --ADIITY-------------NSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILL 161
D+I N L K V+ + L K+I G+ ++ TY ILL
Sbjct: 688 RAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILL 747
Query: 162 DGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMIN 197
+ L G + EV + + G +N Y +I+
Sbjct: 748 EHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIIS 783
Score = 48.5 bits (114), Expect = 4e-06, Method: Composition-based stats.
Identities = 43/194 (22%), Positives = 82/194 (42%), Gaps = 1/194 (0%)
Query: 51 SYSIMINGLCKMKMVNEALNLLKQMHSEK-IIPNTITYNSLIDGLCKTGKVSNAWELLDE 109
++ ++I L + + +N+ K M +K YN +I + V A L E
Sbjct: 109 NFPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFE 168
Query: 110 MHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGR 169
M D TY++ ++A + + L+ ++ I P TYN L++ G
Sbjct: 169 MQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGN 228
Query: 170 IKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFET 229
++A EV + + G + T+N +++ + +AL+ M+ D TF
Sbjct: 229 WREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNI 288
Query: 230 IISALFEKGENDKA 243
II L + G++ +A
Sbjct: 289 IIYCLSKLGQSSQA 302
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 115/229 (50%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALN 70
+P +YN+++ V + V+ M + G PDVL+Y+I++ ++ +
Sbjct: 219 RPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYR 278
Query: 71 LLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 130
LL +M + P+ TYN L+ L K A LL+ M G +I + + +D L
Sbjct: 279 LLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLS 338
Query: 131 KGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 190
+ ++ + + + G PD+ Y +++ G G ++ A+E+F+++ +KG N +
Sbjct: 339 RAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVF 398
Query: 191 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
TYN+MI G C G F EA L+ +ME GC + + + T+++ L G+
Sbjct: 399 TYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGK 447
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 111/215 (51%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ G P+V+TYN +M + + ++ + + M + G PD+ +Y+I+++ L
Sbjct: 248 MLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNK 307
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
ALNLL M + P I + +LIDGL + GK+ +DE G D++ Y
Sbjct: 308 PLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTV 367
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ G ++K + K++ +KG P++ TYN ++ G C G+ K+A + +++ +G
Sbjct: 368 MITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRG 427
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 219
N N Y+T++N L G EA ++ M + G
Sbjct: 428 CNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 95/185 (51%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M+K G P++ TYN L+ N+ A + N M ++GV P V+ ++ +I+GL
Sbjct: 279 LLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLS 338
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + + + P+ + Y +I G G++ A E+ EM +GQ ++
Sbjct: 339 RAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVF 398
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYNS + C + AL+K++ +G P+ Y+ L++ L G++ +A EV +D+
Sbjct: 399 TYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDM 458
Query: 181 FKKGY 185
+KG+
Sbjct: 459 VEKGH 463
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 65/116 (56%)
Query: 6 MKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMV 65
+K G P+VV Y ++ GY E+ KA+ +F MT+ G P+V +Y+ MI G C
Sbjct: 354 VKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKF 413
Query: 66 NEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 121
EA LLK+M S PN + Y++L++ L GKV A E++ +M +G +I+
Sbjct: 414 KEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLIS 469
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 98/231 (42%), Gaps = 6/231 (2%)
Query: 17 YNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMH 76
Y+ LM + E + + M + G +++++I C A ++++Q
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLI---CTCGEAGLARDVVEQFI 211
Query: 77 SEKII---PNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGH 133
K P +YN+++ L + + ++M G D++TYN + A +
Sbjct: 212 KSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLG 271
Query: 134 HVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYN 193
D+ L+ +++ G PD+ TYNILL L + A + + + G +
Sbjct: 272 KTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFT 331
Query: 194 TMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
T+I+GL + G + M + GC D + + +I+ GE +KAE
Sbjct: 332 TLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAE 382
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 120/243 (49%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L +++ G+ P + YN++++G C ++ + M GV P + + + L
Sbjct: 461 LLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLA 520
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ AL+LLK+M P L+ LC+ G+ +A + LD++ G ++
Sbjct: 521 ERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMV 580
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
+ +D L K VD+G+ L + + G PD+ Y++L+ LCK R +A +F ++
Sbjct: 581 ASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEM 640
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
KG TYN+MI+G CKEG D L+ + +M ++ D IT+ ++I L G
Sbjct: 641 VSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRP 700
Query: 241 DKA 243
+A
Sbjct: 701 SEA 703
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 103/217 (47%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M G +P + L+ C A + + G +++ + I+GL
Sbjct: 531 LLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLI 590
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + V+ L L + + + P+ I Y+ LI LCK + A L +EM +G +
Sbjct: 591 KNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVA 650
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYNS +D CK +D+G++ I ++ + PD+ TY L+ GLC GR +A + ++
Sbjct: 651 TYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEM 710
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMED 217
K N T+ +I GLCK G EAL +ME+
Sbjct: 711 KGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEE 747
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 91/185 (49%)
Query: 8 QGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNE 67
+G ++V + +DG V++ +F + G PDV++Y ++I LCK E
Sbjct: 573 EGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTME 632
Query: 68 ALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 127
A L +M S+ + P TYNS+IDG CK G++ + M+ + D+ITY S +
Sbjct: 633 ADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIH 692
Query: 128 ALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
LC + I ++ K P+ T+ L+ GLCKCG +A F+++ +K
Sbjct: 693 GLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEP 752
Query: 188 NNWTY 192
++ Y
Sbjct: 753 DSAVY 757
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 82/157 (52%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ +G+KP V TYNS++DG+C E+++ + M + PDV++Y+ +I+GLC
Sbjct: 640 MVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGR 699
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+EA+ +M + PN IT+ +LI GLCK G A EM + D Y S
Sbjct: 700 PSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLS 759
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILL 161
+ + +++ G + ++++ KG P N +L
Sbjct: 760 LVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYML 796
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 123/255 (48%), Gaps = 20/255 (7%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
++ ++ ++ ++ N TY L+ G+ + ++KA +F M +MG+ D+ Y ++I GLC
Sbjct: 270 LIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLC 329
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K K + AL+L ++ I P+ L+ + ++S E++ + + + ++
Sbjct: 330 KHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVI--IGDIDKKSVML 387
Query: 121 TYNSFLDALCK---------------GHHVDKGIALIKKVI---DKGIQPDMCTYNILLD 162
Y S + + G++ G++ I K++ +K I PD + +I+++
Sbjct: 388 LYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVIN 447
Query: 163 GLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIH 222
L K ++ A + D+ + G YN +I G+CKEG +E+L L+ +M+D G
Sbjct: 448 CLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEP 507
Query: 223 DPITFETIISALFEK 237
T I L E+
Sbjct: 508 SQFTLNCIYGCLAER 522
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 89/191 (46%)
Query: 44 GVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNA 103
+ PD S SI+IN L K V+ A+ LL + +IP + YN++I+G+CK G+ +
Sbjct: 434 AILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEES 493
Query: 104 WELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDG 163
+LL EM G T N L + + L+KK+ G +P + L+
Sbjct: 494 LKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKK 553
Query: 164 LCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHD 223
LC+ GR DA + D+ +G+ + I+GL K D L L + NG D
Sbjct: 554 LCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPD 613
Query: 224 PITFETIISAL 234
I + +I AL
Sbjct: 614 VIAYHVLIKAL 624
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 109/220 (49%), Gaps = 6/220 (2%)
Query: 25 CLVNE--VNKAQAVFNTMTQMGV-FPDVLSYSIMINGLCKMKMVNEAL--NLLKQMHSEK 79
CL N V++A +VF+ + +MG+ P+ +Y+ ++ + K + L LK+M
Sbjct: 150 CLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCG 209
Query: 80 IIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGI 139
+ T ++ C TGK A + +E+ RG + I+ + + CK VDK
Sbjct: 210 FHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS-TILVVSFCKWGQVDKAF 268
Query: 140 ALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGL 199
LI+ + ++ I+ + TY +L+ G K RI A ++F+ + + G N + Y+ +I GL
Sbjct: 269 ELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGL 328
Query: 200 CKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
CK + AL+L +++ +G D ++ + E+ E
Sbjct: 329 CKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESE 368
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 118/293 (40%), Gaps = 52/293 (17%)
Query: 2 LAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCK 61
L M G + T ++ YC + +A +VFN + G + +S +I++ CK
Sbjct: 202 LKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS-TILVVSFCK 260
Query: 62 MKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 121
V++A L++ + I N TY LI G K ++ A++L ++M G ADI
Sbjct: 261 WGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIAL 320
Query: 122 YNSFLDALCKGHHVDKGIALIKKVIDKGIQPD---------------------------- 153
Y+ + LCK ++ ++L ++ GI PD
Sbjct: 321 YDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDI 380
Query: 154 -----MCTYNILLDGLCKCGRIKDAQEVFQDLF------------------KKGYNLNNW 190
M Y L +G + + +A Q+L K ++
Sbjct: 381 DKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSD 440
Query: 191 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ + +IN L K D A+TL+ + NG I P+ + II + ++G ++++
Sbjct: 441 SLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEES 493
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 125/270 (46%), Gaps = 34/270 (12%)
Query: 6 MKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMV 65
M+ P+ TY+ L++G+ + KA+ VF M G PD+++YSIM++ LCK V
Sbjct: 229 MRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRV 288
Query: 66 NEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 125
+EAL +++ M P T Y+ L+ ++ A + EM G AD+ +NS
Sbjct: 289 DEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSL 348
Query: 126 LDALCKGHHVDKGIALIKKVIDKGI----------------------------------Q 151
+ A CK + + ++K++ KG+ +
Sbjct: 349 IGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCE 408
Query: 152 PDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTL 211
PD TY +++ C+ ++ A +V++ + KKG + T++ +INGLC+E +A L
Sbjct: 409 PDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVL 468
Query: 212 MSKMEDNGCIHDPITFETIISALFEKGEND 241
+ +M + G +TF + L ++ D
Sbjct: 469 LEEMIEMGIRPSGVTFGRLRQLLIKEERED 498
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 109/222 (49%), Gaps = 2/222 (0%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
+V Y+ +++ + + + N M + + +V ++ I++ + + V+EA+
Sbjct: 133 SVRAYHMMIESTAKIRQYKLMWDLINAMRKKKML-NVETFCIVMRKYARAQKVDEAIYAF 191
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 132
M + PN + +N L+ LCK+ V A E+ + M R P D TY+ L+ K
Sbjct: 192 NVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTP-DSKTYSILLEGWGKE 250
Query: 133 HHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 192
++ K + +++ID G PD+ TY+I++D LCK GR+ +A + + + + Y
Sbjct: 251 PNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIY 310
Query: 193 NTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
+ +++ E +EA+ +ME +G D F ++I A
Sbjct: 311 SVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAF 352
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 122/232 (52%), Gaps = 3/232 (1%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFP-DVLSYSIMINGLCKMKMVNE 67
GVK + ++N+L+ C + V+ A++VFN + G P D SY+IMI+G K+ V E
Sbjct: 216 GVKCSTESFNALLRCLCERSHVSAAKSVFNA--KKGNIPFDSCSYNIMISGWSKLGEVEE 273
Query: 68 ALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 127
+LK+M P+ ++Y+ LI+GL +TG+++++ E+ D + +G D YN+ +
Sbjct: 274 MEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMIC 333
Query: 128 ALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
D+ + ++++D+ +P++ TY+ L+ GL K ++ DA E+F+++ +G
Sbjct: 334 NFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLP 393
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
+ + LC G A+ + K GC ++ ++ L G+
Sbjct: 394 TTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGK 445
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 112/243 (46%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M++ G P+ ++Y+ L++G +N + +F+ + G PD Y+ MI
Sbjct: 277 VLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFI 336
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ +E++ ++M E+ PN TY+ L+ GL K KVS+A E+ +EM RG
Sbjct: 337 SARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTG 396
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
SFL LC + + +K G + Y +LL L + G+ V+ ++
Sbjct: 397 LVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEM 456
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+ GY + Y +++GLC G + A+ +M + G + + + S L +
Sbjct: 457 QESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKT 516
Query: 241 DKA 243
+ A
Sbjct: 517 ELA 519
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 112/229 (48%), Gaps = 3/229 (1%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
GV +V +Y+ ++ + V M GV PD+ +I ++ ++ V A
Sbjct: 146 GVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRA 205
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQ-PADIITYNSFLD 127
+ L ++ S + +T ++N+L+ LC+ VS A + + +G P D +YN +
Sbjct: 206 IELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAK--KGNIPFDSCSYNIMIS 263
Query: 128 ALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
K V++ ++K++++ G PD +Y+ L++GL + GRI D+ E+F ++ KG
Sbjct: 264 GWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVP 323
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFE 236
+ YN MI FDE++ +M D C + T+ ++S L +
Sbjct: 324 DANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIK 372
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 98/194 (50%), Gaps = 3/194 (1%)
Query: 39 TMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTG 98
+ + GV DV SYS+++ L + K+ + +++LK M E + P+ +D +
Sbjct: 141 AVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVH 200
Query: 99 KVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQP-DMCTY 157
V A EL +E G ++N+ L LC+ HV ++ KG P D C+Y
Sbjct: 201 YVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNA--KKGNIPFDSCSY 258
Query: 158 NILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMED 217
NI++ G K G +++ ++V +++ + G+ + +Y+ +I GL + G ++++ + ++
Sbjct: 259 NIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKH 318
Query: 218 NGCIHDPITFETII 231
G + D + +I
Sbjct: 319 KGNVPDANVYNAMI 332
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 78/173 (45%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ + +PN+ TY+ L+ G +V+ A +F M GV P + + LC
Sbjct: 351 MLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGP 410
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ A+ + ++ + Y L+ L + GK + DEM G P+D+ Y
Sbjct: 411 PHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEY 470
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVF 177
+D LC H++ + ++++ + KG P+ Y+ L L + + A ++F
Sbjct: 471 IVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLF 523
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 117/239 (48%), Gaps = 3/239 (1%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M K+ +P++ +Y L++G+ + + V M G PDV++Y I+IN CK K
Sbjct: 223 MKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKK 282
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
EA+ +M P+ + SLI+GL K+++A E + G P + TYN+
Sbjct: 283 YEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNA 342
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ A C ++ + ++ KG+ P+ TY+I+L L + R K+A EV+Q +
Sbjct: 343 LVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---S 399
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
TY M+ C + D A+ + +M+ G + F ++I+AL + + D+A
Sbjct: 400 CEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEA 458
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 105/244 (43%), Gaps = 32/244 (13%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M +G +P+VV Y +++ +C + +A FN M Q P + +INGL K
Sbjct: 258 MKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKK 317
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRG-----QPADI 119
+N+AL ++ S TYN+L+ C + ++ +A++ +DEM ++G + DI
Sbjct: 318 LNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDI 377
Query: 120 I---------------------------TYNSFLDALCKGHHVDKGIALIKKVIDKGIQP 152
I TY + C +D I + ++ KG+ P
Sbjct: 378 ILHHLIRMQRSKEAYEVYQTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLP 437
Query: 153 DMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLM 212
M ++ L+ LC ++ +A E F ++ G ++ + L EG D+ L+
Sbjct: 438 GMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLV 497
Query: 213 SKME 216
KM+
Sbjct: 498 VKMD 501
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 101/228 (44%)
Query: 16 TYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQM 75
T+ + Y +V +A F+ M + G + ++ M++ L K + V +A + +M
Sbjct: 164 TFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKM 223
Query: 76 HSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHV 135
++ P+ +Y L++G + + E+ EM G D++ Y ++A CK
Sbjct: 224 KKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKY 283
Query: 136 DKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTM 195
++ I ++ + +P + L++GL ++ DA E F+ G+ L TYN +
Sbjct: 284 EEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNAL 343
Query: 196 INGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ C ++A + +M G + T++ I+ L + +A
Sbjct: 344 VGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEA 391
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 91/213 (42%), Gaps = 36/213 (16%)
Query: 68 ALNLLKQMHSEKIIPNTIT-YNSLIDGLCKTGKVSNAWELLDEMHVR------------- 113
AL++ K ++K +T + YN+LI+ L K + W L+D+M +
Sbjct: 111 ALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISR 170
Query: 114 ---------------------GQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQP 152
G + +N LD L K +V + K+ K +P
Sbjct: 171 RYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEP 230
Query: 153 DMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLM 212
D+ +Y ILL+G + + EV +++ +G+ + Y +IN CK ++EA+
Sbjct: 231 DIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFF 290
Query: 213 SKMEDNGCIHDPITFETIISAL-FEKGENDKAE 244
++ME C P F ++I+ L EK ND E
Sbjct: 291 NEMEQRNCKPSPHIFCSLINGLGSEKKLNDALE 323
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 109 bits (273), Expect = 1e-24, Method: Composition-based stats.
Identities = 60/234 (25%), Positives = 115/234 (49%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ A M +G++P++VTYN+L+ + ++A+ VF TM G+ PD+ +YS ++
Sbjct: 234 LFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFG 293
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K++ + + +LL +M S +P+ +YN L++ K+G + A + +M G +
Sbjct: 294 KLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNAN 353
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY+ L+ + D L ++ PD TYNIL++ + G K+ +F D+
Sbjct: 354 TYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDM 413
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
++ + TY +I K GL ++A ++ M N + + +I A
Sbjct: 414 VEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAF 467
Score = 103 bits (256), Expect = 2e-22, Method: Composition-based stats.
Identities = 62/245 (25%), Positives = 124/245 (50%), Gaps = 3/245 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVN--KAQAVFNTMTQMGVFPDVLSYSIMING 58
+L M + + P+++TYN++++ C ++ +F M G+ PD+++Y+ +++
Sbjct: 198 LLDRMKNEKISPSILTYNTVINA-CARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSA 256
Query: 59 LCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPAD 118
+ +EA + + M+ I+P+ TY+ L++ K ++ +LL EM G D
Sbjct: 257 CAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPD 316
Query: 119 IITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 178
I +YN L+A K + + + + ++ G P+ TY++LL+ + GR D +++F
Sbjct: 317 ITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFL 376
Query: 179 DLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
++ + + TYN +I + G F E +TL M + D T+E II A + G
Sbjct: 377 EMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGG 436
Query: 239 ENDKA 243
++ A
Sbjct: 437 LHEDA 441
Score = 101 bits (251), Expect = 6e-22, Method: Composition-based stats.
Identities = 63/235 (26%), Positives = 111/235 (47%), Gaps = 1/235 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M QGV +V +Y +L++ Y + + + M + P +L+Y+ +IN + +
Sbjct: 167 MPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGL 226
Query: 65 VNEA-LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
E L L +M E I P+ +TYN+L+ G A + M+ G D+ TY+
Sbjct: 227 DWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYS 286
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
++ K ++K L+ ++ G PD+ +YN+LL+ K G IK+A VF +
Sbjct: 287 HLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAA 346
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
G N TY+ ++N + G +D+ L +M+ + D T+ +I E G
Sbjct: 347 GCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGG 401
Score = 100 bits (249), Expect = 9e-22, Method: Composition-based stats.
Identities = 66/235 (28%), Positives = 113/235 (48%), Gaps = 7/235 (2%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALN 70
KPN Y ++ ++K VF+ M GV V SY+ +IN + +L
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLE 197
Query: 71 LLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWE----LLDEMHVRGQPADIITYNSFL 126
LL +M +EKI P+ +TYN++I+ C G + WE L EM G DI+TYN+ L
Sbjct: 198 LLDRMKNEKISPSILTYNTVINA-CARGGLD--WEGLLGLFAEMRHEGIQPDIVTYNTLL 254
Query: 127 DALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 186
A D+ + + + D GI PD+ TY+ L++ K R++ ++ ++ G
Sbjct: 255 SACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSL 314
Query: 187 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
+ +YN ++ K G EA+ + +M+ GC + T+ +++ + G D
Sbjct: 315 PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYD 369
Score = 85.1 bits (209), Expect = 4e-17, Method: Composition-based stats.
Identities = 55/243 (22%), Positives = 110/243 (45%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M G P++ +YN L++ Y + +A VF+ M G P+ +YS+++N
Sbjct: 304 LLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFG 363
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ ++ L +M S P+ TYN LI+ + G L +M D+
Sbjct: 364 QSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDME 423
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY + A KG + +++ + I P Y +++ + ++A F +
Sbjct: 424 TYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTM 483
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+ G N + T+++++ + GL E+ ++S++ D+G + TF I A + G+
Sbjct: 484 HEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKF 543
Query: 241 DKA 243
++A
Sbjct: 544 EEA 546
Score = 77.8 bits (190), Expect = 6e-15, Method: Composition-based stats.
Identities = 54/228 (23%), Positives = 95/228 (41%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M G PN TY+ L++ + + + +F M PD +Y+I+I +
Sbjct: 343 MQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGY 402
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
E + L M E I P+ TY +I K G +A ++L M Y
Sbjct: 403 FKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTG 462
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++A + ++ + + + G P + T++ LL + G +K+++ + L G
Sbjct: 463 VIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSG 522
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIIS 232
N T+N I + G F+EA+ ME + C D T E ++S
Sbjct: 523 IPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLS 570
Score = 68.9 bits (167), Expect = 3e-12, Method: Composition-based stats.
Identities = 45/212 (21%), Positives = 97/212 (45%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M P+ TYN L++ + + +F+ M + + PD+ +Y +I K +
Sbjct: 378 MKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGL 437
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+A +L+ M + I+P++ Y +I+ + A + MH G I T++S
Sbjct: 438 HEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHS 497
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
L + +G V + A++ +++D GI + T+N ++ + G+ ++A + + D+ K
Sbjct: 498 LLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSR 557
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKME 216
+ + T +++ L DE +M+
Sbjct: 558 CDPDERTLEAVLSVYSFARLVDECREQFEEMK 589
Score = 50.1 bits (118), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/179 (22%), Positives = 74/179 (41%), Gaps = 37/179 (20%)
Query: 68 ALNLLKQMHSEKII-PNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 126
+L L K M + PN Y +I L + G + E+ DEM +G + +Y + +
Sbjct: 124 SLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALI 183
Query: 127 DALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 186
+A + + + L+ ++ ++ I P + TY
Sbjct: 184 NAYGRNGRYETSLELLDRMKNEKISPSILTY----------------------------- 214
Query: 187 LNNWTYNTMINGLCKEGL-FDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
NT+IN + GL ++ L L ++M G D +T+ T++SA +G D+AE
Sbjct: 215 ------NTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAE 267
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 109 bits (273), Expect = 2e-24, Method: Composition-based stats.
Identities = 71/284 (25%), Positives = 129/284 (45%), Gaps = 45/284 (15%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M +G+ P+ T+N++++G+C ++++A+ +F M + P V+SY+ MI G +
Sbjct: 281 MKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDR 340
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKV------------------------ 100
V++ L + ++M S I PN TY++L+ GLC GK+
Sbjct: 341 VDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFL 400
Query: 101 ------------SNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDK 148
+ A E+L M PA+ Y ++ CK ++ I L+ +I+K
Sbjct: 401 KLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEK 460
Query: 149 GI--------QPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLC 200
I + + YN +++ LC G+ A+ +F+ L K+G + N +I G
Sbjct: 461 EIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQD-ALNNLIRGHA 519
Query: 201 KEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
KEG D + ++ M G + +E +I + KGE A+
Sbjct: 520 KEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAK 563
Score = 105 bits (262), Expect = 3e-23, Method: Composition-based stats.
Identities = 67/249 (26%), Positives = 114/249 (45%), Gaps = 9/249 (3%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ +GV+P TYN ++ G+ L + A F M G+ PD +++ MING C+ K
Sbjct: 246 MVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKK 305
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++EA L +M KI P+ ++Y ++I G +V + + +EM G + TY++
Sbjct: 306 MDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYST 365
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQP-DMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
L LC + + ++K ++ K I P D + LL K G + A EV + +
Sbjct: 366 LLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATL 425
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCI--------HDPITFETIISALF 235
Y +I CK ++ A+ L+ + + I +P + II L
Sbjct: 426 NVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLC 485
Query: 236 EKGENDKAE 244
G+ KAE
Sbjct: 486 NNGQTAKAE 494
Score = 90.5 bits (223), Expect = 8e-19, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 89/179 (49%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M GV+ + +YNSL A+ FN M GV P +Y++M+ G
Sbjct: 211 MKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLR 270
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ AL + M + I P+ T+N++I+G C+ K+ A +L EM +++Y +
Sbjct: 271 LETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTT 330
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ VD G+ + +++ GI+P+ TY+ LL GLC G++ +A+ + +++ K
Sbjct: 331 MIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAK 389
Score = 84.0 bits (206), Expect = 8e-17, Method: Composition-based stats.
Identities = 51/215 (23%), Positives = 99/215 (46%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M ++GV + + L++ Y V ++ +F M +GV + SY+ + +
Sbjct: 172 ILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVIL 231
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ A +M SE + P TYN ++ G + ++ A ++M RG D
Sbjct: 232 RRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDA 291
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
T+N+ ++ C+ +D+ L ++ I P + +Y ++ G R+ D +F+++
Sbjct: 292 TFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEM 351
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM 215
G N TY+T++ GLC G EA ++ M
Sbjct: 352 RSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNM 386
Score = 75.5 bits (184), Expect = 3e-14, Method: Composition-based stats.
Identities = 48/218 (22%), Positives = 103/218 (47%)
Query: 27 VNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTIT 86
V+++N A+ + M + GV D + ++I K +V E++ + ++M + +
Sbjct: 163 VSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKS 222
Query: 87 YNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVI 146
YNSL + + G+ A ++M G TYN L ++ + + +
Sbjct: 223 YNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMK 282
Query: 147 DKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFD 206
+GI PD T+N +++G C+ ++ +A+++F ++ + +Y TMI G D
Sbjct: 283 TRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVD 342
Query: 207 EALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ L + +M +G + T+ T++ L + G+ +A+
Sbjct: 343 DGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAK 380
Score = 72.0 bits (175), Expect = 3e-13, Method: Composition-based stats.
Identities = 47/177 (26%), Positives = 86/177 (48%)
Query: 55 MINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRG 114
MI L ++ +N A +L M + + + + LI+ K G V + ++ +M G
Sbjct: 156 MIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLG 215
Query: 115 QPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQ 174
I +YNS + + K++ +G++P TYN++L G R++ A
Sbjct: 216 VERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETAL 275
Query: 175 EVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 231
F+D+ +G + ++ T+NTMING C+ DEA L +M+ N +++ T+I
Sbjct: 276 RFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMI 332
Score = 58.9 bits (141), Expect = 3e-09, Method: Composition-based stats.
Identities = 47/194 (24%), Positives = 88/194 (45%), Gaps = 1/194 (0%)
Query: 52 YSIMINGLCKMKMVNEALNLLKQMHSEKIIP-NTITYNSLIDGLCKTGKVSNAWELLDEM 110
+S++ N L K + AL + +I + T+ +I L + K+++A +L +M
Sbjct: 117 HSLVYNVLHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDM 176
Query: 111 HVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRI 170
+G P D + +++ K V + + + +K+ D G++ + +YN L + + GR
Sbjct: 177 PEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRY 236
Query: 171 KDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETI 230
A+ F + +G TYN M+ G + AL M+ G D TF T+
Sbjct: 237 MMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTM 296
Query: 231 ISALFEKGENDKAE 244
I+ + D+AE
Sbjct: 297 INGFCRFKKMDEAE 310
Score = 58.5 bits (140), Expect = 4e-09, Method: Composition-based stats.
Identities = 61/254 (24%), Positives = 111/254 (43%), Gaps = 16/254 (6%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVF---PDVL-----SY 52
+L M V Y L++ C + N+A + +T+ + + D L +Y
Sbjct: 418 VLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAY 477
Query: 53 SIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHV 112
+ +I LC +A L +Q+ ++ + + N+LI G K G +++E+L M
Sbjct: 478 NPIIEYLCNNGQTAKAEVLFRQL-MKRGVQDQDALNNLIRGHAKEGNPDSSYEILKIMSR 536
Query: 113 RGQPADIITYNSFLDA-LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIK 171
RG P + Y + + + KG D AL +++ G PD + +++ L + GR++
Sbjct: 537 RGVPRESNAYELLIKSYMSKGEPGDAKTAL-DSMVEDGHVPDSSLFRSVIESLFEDGRVQ 595
Query: 172 DAQEVFQDLFKK--GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFET 229
A V + K G N ++ L G +EAL + + NG D ++
Sbjct: 596 TASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTAD---LDS 652
Query: 230 IISALFEKGENDKA 243
++S L EKG+ A
Sbjct: 653 LLSVLSEKGKTIAA 666
Score = 51.2 bits (121), Expect = 6e-07, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 97/221 (43%), Gaps = 6/221 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L +M ++GV Y L+ Y E A+ ++M + G PD + +I L
Sbjct: 530 ILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLF 589
Query: 61 KMKMVNEALNLLKQMHSEK--IIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPAD 118
+ V A ++ M + I N +++ L G V A +D ++ G AD
Sbjct: 590 EDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTAD 649
Query: 119 IITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 178
+ +S L L + + L+ +++ + + +Y+ +LD L G+ +A V
Sbjct: 650 L---DSLLSVLSEKGKTIAALKLLDFGLERDLSLEFSSYDKVLDALLGAGKTLNAYSVLC 706
Query: 179 DLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 219
+ +KG + + + + +I L +EG +A ++S+M G
Sbjct: 707 KIMEKGSSTDWKSSDELIKSLNQEGNTKQA-DVLSRMIKKG 746
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 132/284 (46%), Gaps = 41/284 (14%)
Query: 1 MLAVMMKQG---VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYS---- 53
+L +M+++G V PN+ T+N L+ +C +V +A V M + GV PD ++Y+
Sbjct: 172 LLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIAT 231
Query: 54 ---------------------------------IMINGLCKMKMVNEALNLLKQMHSEKI 80
I++ G C+ V + L +++M ++
Sbjct: 232 CYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRV 291
Query: 81 IPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIA 140
N + +NSLI+G + E+L M AD+ITY++ ++A +++K
Sbjct: 292 EANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQ 351
Query: 141 LIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLC 200
+ K+++ G++PD Y+IL G + K A+E+ + L + N + T+I+G C
Sbjct: 352 VFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWC 410
Query: 201 KEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
G D+A+ + +KM G + TFET++ E + KAE
Sbjct: 411 SNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAE 454
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 119/246 (48%), Gaps = 5/246 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ + + G +P++++Y +L+ + + ++ + + Q G D + ++ +IN
Sbjct: 67 VFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFS 126
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQ---PA 117
+ + +A+ L +M + P T TYN+LI G GK + ELLD M G
Sbjct: 127 ESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGP 186
Query: 118 DIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGR-IKDAQEV 176
+I T+N + A CK V++ ++KK+ + G++PD TYN + + G ++ EV
Sbjct: 187 NIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEV 246
Query: 177 FQDL-FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALF 235
+ + K+ N T ++ G C+EG + L + +M++ + + F ++I+
Sbjct: 247 VEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFV 306
Query: 236 EKGEND 241
E + D
Sbjct: 307 EVMDRD 312
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 99/199 (49%), Gaps = 3/199 (1%)
Query: 49 VLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLD 108
V S + ++N L + +EA + K + P+ I+Y +L+ + + + ++
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 109 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCG 168
E+ G D I +N+ ++A + +++ + + K+ + G+ P TYN L+ G G
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 169 RIKDAQEVFQDLFKKG---YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPI 225
+ + + E+ + ++G N T+N ++ CK+ +EA ++ KME+ G D +
Sbjct: 165 KPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTV 224
Query: 226 TFETIISALFEKGENDKAE 244
T+ TI + +KGE +AE
Sbjct: 225 TYNTIATCYVQKGETVRAE 243
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 84/163 (51%), Gaps = 1/163 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L +M + VK +V+TY+++M+ + + KA VF M + GV PD +YSI+ G
Sbjct: 317 VLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYV 376
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ K +A LL+ + E PN + + ++I G C G + +A + ++M G +I
Sbjct: 377 RAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIK 435
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDG 163
T+ + + + K +++ + G++P+ T+ +L +
Sbjct: 436 TFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEA 478
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 116/233 (49%)
Query: 6 MKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMV 65
M+ N+ + SL+ G+C V ++ +A+ V M + G PD++ Y+ +++G +
Sbjct: 244 MRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKM 303
Query: 66 NEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 125
+A +LL+ M PN Y LI LCK ++ A ++ EM AD++TY +
Sbjct: 304 ADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTAL 363
Query: 126 LDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 185
+ CK +DK ++ +I KG+ P TY ++ K ++ E+ + + + Y
Sbjct: 364 VSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEY 423
Query: 186 NLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
+ + YN +I CK G EA+ L ++ME+NG TF +I+ L +G
Sbjct: 424 HPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQG 476
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 113/219 (51%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M + G +P++V Y +L+ GY ++ A + M + G P+ Y+++I LC
Sbjct: 274 VLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALC 333
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K+ + EA+ + +M + + +TY +L+ G CK GK+ + +LD+M +G +
Sbjct: 334 KVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSEL 393
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY + A K ++ + L++K+ PD+ YN+++ CK G +K+A ++ ++
Sbjct: 394 TYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEM 453
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 219
+ G + T+ MINGL +G EA +M G
Sbjct: 454 EENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRG 492
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 105/213 (49%), Gaps = 3/213 (1%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSY-SIMINGLCKMK 63
M K G +P+ + L+D C V A +F M FP L Y + ++ G C++
Sbjct: 209 MPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR--FPVNLRYFTSLLYGWCRVG 266
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
+ EA +L QM+ P+ + Y +L+ G GK+++A++LL +M RG + Y
Sbjct: 267 KMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYT 326
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ ALCK +++ + + ++ + D+ TY L+ G CK G+I V D+ KK
Sbjct: 327 VLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKK 386
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKME 216
G + TY ++ K+ F+E L LM KM
Sbjct: 387 GLMPSELTYMHIMVAHEKKESFEECLELMEKMR 419
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 113/234 (48%), Gaps = 16/234 (6%)
Query: 24 YCLVNEVNKAQA-VFNTMTQMGVF-----------PDVLS---YSIMINGLCKMKMVNEA 68
YC EV K+ + + M Q G P ++ + +++ MV +A
Sbjct: 143 YCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKA 202
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
+ +L +M P+ + L+D LCK G V +A +L ++M +R P ++ + S L
Sbjct: 203 IEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRF-PVNLRYFTSLLYG 261
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
C+ + + ++ ++ + G +PD+ Y LL G G++ DA ++ +D+ ++G+ N
Sbjct: 262 WCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPN 321
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 242
Y +I LCK +EA+ + +ME C D +T+ ++S + G+ DK
Sbjct: 322 ANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDK 375
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 113/233 (48%), Gaps = 4/233 (1%)
Query: 8 QGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNE 67
Q ++P + + L+ + + V KA V + M + G PD + +++ LCK V +
Sbjct: 179 QLIEPEL--FVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKD 236
Query: 68 ALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 127
A L + M + N + SL+ G C+ GK+ A +L +M+ G DI+ Y + L
Sbjct: 237 AAKLFEDMRM-RFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLS 295
Query: 128 ALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
+ L++ + +G +P+ Y +L+ LCK R+++A +VF ++ +
Sbjct: 296 GYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEA 355
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+ TY +++G CK G D+ ++ M G + +T+ I+ A EK E+
Sbjct: 356 DVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVA-HEKKES 407
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 127/265 (47%), Gaps = 40/265 (15%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M K+G+ P +VT+N L+ GY + + + A + M G+ DV +++ MI+GL M
Sbjct: 273 MEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGM 332
Query: 65 VNEALNLLKQMHSEKIIPNTITY-----------------------------------NS 89
+AL++ ++M ++PN +T NS
Sbjct: 333 RYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNS 392
Query: 90 LIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKG 149
L+D K GK+ +A ++ D + + D+ T+NS + C+ + K L ++ D
Sbjct: 393 LVDMYSKCGKLEDARKVFDSV----KNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDAN 448
Query: 150 IQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG-YNLNNWTYNTMINGLCKEGLFDEA 208
++P++ T+N ++ G K G +A ++FQ + K G N T+N +I G + G DEA
Sbjct: 449 LRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEA 508
Query: 209 LTLMSKMEDNGCIHDPITFETIISA 233
L L KM+ + + + +T +++ A
Sbjct: 509 LELFRKMQFSRFMPNSVTILSLLPA 533
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 123/231 (53%), Gaps = 4/231 (1%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
+V+ +NS++ YC + +A + M + G+ P +++++I+I G ++ + A++L+
Sbjct: 246 DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLM 305
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 132
++M + I + T+ ++I GL G A ++ +M + G + +T S + A
Sbjct: 306 QKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCL 365
Query: 133 HHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 192
+++G + + G D+ N L+D KCG+++DA++VF + N + +T+
Sbjct: 366 KVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSV----KNKDVYTW 421
Query: 193 NTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
N+MI G C+ G +A L ++M+D + IT+ T+IS + G+ +A
Sbjct: 422 NSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEA 472
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 107/225 (47%), Gaps = 12/225 (5%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
N+ T+++++ Y N + +F M + GV PD + ++ G V
Sbjct: 145 NLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAG---- 200
Query: 73 KQMHSEKIIPNTIT----YNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
K +HS I + NS++ K G++ A + M R D+I +NS L A
Sbjct: 201 KVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRER----DVIAWNSVLLA 256
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
C+ ++ + L+K++ +GI P + T+NIL+ G + G+ A ++ Q + G +
Sbjct: 257 YCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITAD 316
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
+T+ MI+GL G+ +AL + KM G + + +T + +SA
Sbjct: 317 VFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSA 361
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 86/181 (47%), Gaps = 5/181 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M M GV PN VT S + + +N+ V + +MG DVL + +++
Sbjct: 339 MFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYS 398
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + +A + + ++ + T+NS+I G C+ G A+EL M +II
Sbjct: 399 KCGKLEDARKVFDSVKNKDV----YTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNII 454
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKG-IQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
T+N+ + K + + L +++ G +Q + T+N+++ G + G+ +A E+F+
Sbjct: 455 TWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRK 514
Query: 180 L 180
+
Sbjct: 515 M 515
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 14/161 (8%)
Query: 77 SEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVD 136
++K PN I + D LC+ G + A + LD + +G TY L++ +D
Sbjct: 40 TKKKEPNIIP-DEQFDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESC-----ID 93
Query: 137 KGIALIKKVIDKGI----QPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 192
G + +++ +PD+ LL KCG I DA++VF + ++ N +T+
Sbjct: 94 SGSIHLGRILHARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRER----NLFTW 149
Query: 193 NTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
+ MI +E + E L M +G + D F I+
Sbjct: 150 SAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQG 190
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 108 bits (270), Expect = 3e-24, Method: Composition-based stats.
Identities = 63/220 (28%), Positives = 113/220 (51%), Gaps = 2/220 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M + + VTYN L+ Y +A V MT+ GV P+ ++Y+ +I+
Sbjct: 338 VLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYG 397
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K +EAL L M +PNT TYN+++ L K + + ++L +M G +
Sbjct: 398 KAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRA 457
Query: 121 TYNSFLDALCKGHHVDKGI-ALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
T+N+ L ALC +DK + + +++ G +PD T+N L+ +CG DA +++ +
Sbjct: 458 TWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGE 516
Query: 180 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 219
+ + G+N TYN ++N L ++G + ++S M+ G
Sbjct: 517 MTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKG 556
Score = 106 bits (264), Expect = 2e-23, Method: Composition-based stats.
Identities = 63/235 (26%), Positives = 116/235 (49%), Gaps = 1/235 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEV-NKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
M + G P +VTYN ++D + + K V + M G+ D + S +++ +
Sbjct: 236 MKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREG 295
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
++ EA ++ S P T+TYN+L+ K G + A +L EM PAD +TYN
Sbjct: 296 LLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYN 355
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ A + + +I+ + KG+ P+ TY ++D K G+ +A ++F + +
Sbjct: 356 ELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEA 415
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
G N TYN +++ L K+ +E + ++ M+ NGC + T+ T+++ KG
Sbjct: 416 GCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKG 470
Score = 99.4 bits (246), Expect = 2e-21, Method: Composition-based stats.
Identities = 60/231 (25%), Positives = 117/231 (50%), Gaps = 1/231 (0%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKM-KMVNEALNL 71
+V Y +++ Y + KA +F M +MG P +++Y+++++ KM + + L +
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 72 LKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 131
L +M S+ + + T ++++ + G + A E E+ G +TYN+ L K
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGK 328
Query: 132 GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT 191
+ ++++K++ + D TYN L+ + G K+A V + + KKG N T
Sbjct: 329 AGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAIT 388
Query: 192 YNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 242
Y T+I+ K G DEAL L M++ GC+ + T+ ++S L +K +++
Sbjct: 389 YTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNE 439
Score = 93.6 bits (231), Expect = 1e-19, Method: Composition-based stats.
Identities = 44/192 (22%), Positives = 102/192 (53%), Gaps = 1/192 (0%)
Query: 33 AQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLID 92
++ F + G PD++ ++ M++ + M ++A +L+ + + + P+ +TYNSL+D
Sbjct: 615 SERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMD 674
Query: 93 GLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQP 152
+ G+ A E+L + D+++YN+ + C+ + + + ++ ++ ++GI+P
Sbjct: 675 MYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRP 734
Query: 153 DMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLM 212
+ TYN + G G + ++V + + K N T+ +++G C+ G + EA+ +
Sbjct: 735 CIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFV 794
Query: 213 SKMED-NGCIHD 223
SK++ + C D
Sbjct: 795 SKIKTFDPCFDD 806
Score = 92.0 bits (227), Expect = 3e-19, Method: Composition-based stats.
Identities = 73/314 (23%), Positives = 133/314 (42%), Gaps = 70/314 (22%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
++ +M K+GV PN +TY +++D Y + ++A +F +M + G P+ +Y+ +++ L
Sbjct: 373 VIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLG 432
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTIT---------------------------------- 86
K NE + +L M S PN T
Sbjct: 433 KKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRD 492
Query: 87 -YNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKV 145
+N+LI + G +A ++ EM G A + TYN+ L+AL + G +I +
Sbjct: 493 TFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDM 552
Query: 146 IDKGIQPDMCTYNILLDGLCKCG----------RIKDAQ--------------------- 174
KG +P +Y+++L K G RIK+ Q
Sbjct: 553 KSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRAL 612
Query: 175 ---EVFQDLFKK-GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETI 230
E LFKK GY + +N+M++ + ++D+A ++ + ++G D +T+ ++
Sbjct: 613 AGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSL 672
Query: 231 ISALFEKGENDKAE 244
+ +GE KAE
Sbjct: 673 MDMYVRRGECWKAE 686
Score = 90.9 bits (224), Expect = 7e-19, Method: Composition-based stats.
Identities = 54/245 (22%), Positives = 117/245 (47%), Gaps = 4/245 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPD--VLSYSIMING 58
+++ M +G KP +Y+ ++ Y + + N + + +FP +L ++ N
Sbjct: 548 VISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANF 607
Query: 59 LCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPAD 118
C+ +E L + H K P+ + +NS++ + A +L+ + G D
Sbjct: 608 KCRALAGSERAFTLFKKHGYK--PDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPD 665
Query: 119 IITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 178
++TYNS +D + K ++K + ++PD+ +YN ++ G C+ G +++A +
Sbjct: 666 LVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLS 725
Query: 179 DLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
++ ++G +TYNT ++G G+F E ++ M N C + +TF+ ++ G
Sbjct: 726 EMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAG 785
Query: 239 ENDKA 243
+ +A
Sbjct: 786 KYSEA 790
Score = 90.1 bits (222), Expect = 1e-18, Method: Composition-based stats.
Identities = 62/234 (26%), Positives = 114/234 (48%), Gaps = 2/234 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M +G+K + T ++++ + +A+ F + G P ++Y+ ++
Sbjct: 268 VLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFG 327
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + EAL++LK+M +++TYN L+ + G A +++ M +G + I
Sbjct: 328 KAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAI 387
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY + +DA K D+ + L + + G P+ CTYN +L L K R + ++ D+
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM 447
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALT-LMSKMEDNGCIHDPITFETIISA 233
G + N T+NTM+ LC D+ + + +M+ G D TF T+ISA
Sbjct: 448 KSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISA 500
Score = 86.7 bits (213), Expect = 1e-17, Method: Composition-based stats.
Identities = 50/191 (26%), Positives = 98/191 (51%), Gaps = 1/191 (0%)
Query: 54 IMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVR 113
I + L + + A LL ++ ++ + + Y +++ +TGK A +L + M
Sbjct: 180 IFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEM 239
Query: 114 GQPADIITYNSFLDALCK-GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKD 172
G ++TYN LD K G K + ++ ++ KG++ D T + +L + G +++
Sbjct: 240 GPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLRE 299
Query: 173 AQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIIS 232
A+E F +L GY TYN ++ K G++ EAL+++ +ME+N C D +T+ +++
Sbjct: 300 AKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVA 359
Query: 233 ALFEKGENDKA 243
A G + +A
Sbjct: 360 AYVRAGFSKEA 370
Score = 81.6 bits (200), Expect = 4e-16, Method: Composition-based stats.
Identities = 39/145 (26%), Positives = 76/145 (52%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L + + G+ P++VTYNSLMD Y E KA+ + T+ + + PD++SY+ +I G C
Sbjct: 653 ILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFC 712
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ ++ EA+ +L +M I P TYN+ + G G + ++++ M + +
Sbjct: 713 RRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNEL 772
Query: 121 TYNSFLDALCKGHHVDKGIALIKKV 145
T+ +D C+ + + + K+
Sbjct: 773 TFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 78.6 bits (192), Expect = 4e-15, Method: Composition-based stats.
Identities = 50/200 (25%), Positives = 95/200 (47%), Gaps = 7/200 (3%)
Query: 48 DVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWE-- 105
DV +Y+ +++ + +A++L ++M P +TYN ++D GK+ +W
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVF---GKMGRSWRKI 265
Query: 106 --LLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDG 163
+LDEM +G D T ++ L A + + + ++ G +P TYN LL
Sbjct: 266 LGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQV 325
Query: 164 LCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHD 223
K G +A V +++ + ++ TYN ++ + G EA ++ M G + +
Sbjct: 326 FGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPN 385
Query: 224 PITFETIISALFEKGENDKA 243
IT+ T+I A + G+ D+A
Sbjct: 386 AITYTTVIDAYGKAGKEDEA 405
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 36 VFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLC 95
+F M + + D Y+I+I+GLCK +EA N+ + + P+ TYN +I
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 96 KTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMC 155
+ + A +L EM RG D ITYNS + LCK + + + + +
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCS 107
Query: 156 TYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM 215
T+N L++G CK R+KD +F +++++G N TY T+I+G + G F+ AL + +M
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 216 EDNGCIHDPITFETIISALFEKGENDKA 243
NG ITF I+ L + E KA
Sbjct: 168 VSNGVYSSSITFRDILPQLCSRKELRKA 195
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 104/212 (49%), Gaps = 13/212 (6%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M VM + + + YN ++ G C + ++A +F + G+ PDV +Y++MI
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + A L +M ++P+TITYNS+I GLCK K++ A R
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCS 107
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
T+N+ ++ CK V G+ L ++ +GI ++ TY L+ G + G A ++FQ++
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLM 212
G ++ T+ ++ LC +A+ ++
Sbjct: 168 VSNGVYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M ++G+ NV+TY +L+ G+ V + N A +F M GV+ +++ ++ LC K
Sbjct: 132 MYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKE 191
Query: 65 VNEALNLLKQMHSEKIIPNTIT 86
+ +A+ +L Q S ++ N +T
Sbjct: 192 LRKAVAMLLQKSS--MVSNNVT 211
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M K G KP V YN +MD + A AV+ + G+ + ++ I++ GLCK
Sbjct: 219 MKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGR 278
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ E L +L++M P+ Y ++I L G + + + DEM D++ Y +
Sbjct: 279 IEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGT 338
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ LCK V++G L ++ K I D Y +L++G G+++ A +++DL G
Sbjct: 339 LVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSG 398
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLM 212
Y + YN +I GLC D+A L
Sbjct: 399 YIADIGIYNAVIKGLCSVNQVDKAYKLF 426
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 108/240 (45%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
+M QG P+ + L+ + + V+ M + G P V Y+ +++ L K
Sbjct: 183 LMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNG 242
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
+ AL + + + ++ + T+ L+ GLCK G++ E+L M D+ Y
Sbjct: 243 YFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYT 302
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ + L ++D + + ++ I+PD+ Y L+ GLCK GR++ E+F ++ K
Sbjct: 303 AMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGK 362
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
++ Y +I G +G A L + D+G I D + +I L + DKA
Sbjct: 363 QILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKA 422
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 119/273 (43%), Gaps = 34/273 (12%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M + KP+V Y +++ ++ + V++ M + + PDV++Y ++ GLC
Sbjct: 285 ILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLC 344
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K V L +M ++I+ + Y LI+G GKV +A L +++ G ADI
Sbjct: 345 KDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIG 404
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
YN+ + LC + VDK L + I++ ++PD T + ++ R+ D V + +
Sbjct: 405 IYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERI 464
Query: 181 FKKGYNLNNW----------------------------------TYNTMINGLCKEGLFD 206
+ GY ++++ YN ++ L K G
Sbjct: 465 GELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQ 524
Query: 207 EALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
++L+L +M G D ++ I EKG+
Sbjct: 525 KSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGD 557
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 104/218 (47%), Gaps = 11/218 (5%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
+V YN LM+ + ++ K+ ++F M ++G PD SYSI I + V A +
Sbjct: 506 SVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFH 565
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEM--HVRGQPADIITYNSFLDALC 130
+++ +P+ Y SL GLC+ G++ L+ E +V P + Y + +C
Sbjct: 566 EKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPME-FKYALTVCHVC 624
Query: 131 KGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY--NLN 188
KG + +K + ++ ++ +G+ + Y ++ G+ K G IK A+EVF +L K+ +
Sbjct: 625 KGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTEAD 684
Query: 189 NWTYNTMINGLCKEGLFDEALT------LMSKMEDNGC 220
Y M+ K+ D L+ L SK+ GC
Sbjct: 685 MVVYEEMLIEQTKKKTADLVLSGIKFFGLESKLRAKGC 722
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 89/202 (44%)
Query: 42 QMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVS 101
Q G D +Y+ L + A L + M S+ P+ + LI +
Sbjct: 151 QKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGL 210
Query: 102 NAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILL 161
+ + ++M G + YN +DAL K + D +A+ + + G+ + T+ IL+
Sbjct: 211 RVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILV 270
Query: 162 DGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCI 221
GLCK GRI++ E+ Q + + + + Y MI L EG D +L + +M +
Sbjct: 271 KGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIK 330
Query: 222 HDPITFETIISALFEKGENDKA 243
D + + T++ L + G ++
Sbjct: 331 PDVMAYGTLVVGLCKDGRVERG 352
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/270 (19%), Positives = 106/270 (39%), Gaps = 37/270 (13%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
++ G ++ YN+++ G C VN+V+KA +F + + PD + S ++ M
Sbjct: 394 LVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNR 453
Query: 65 VNEALNLLKQMHSEKIIP-----------------------------------NTITYNS 89
+++ N+L+++ E P + YN
Sbjct: 454 LSDFSNVLERI-GELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNI 512
Query: 90 LIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKG 149
L++ L K G + + L EM G D +Y+ + + V + +K+I+
Sbjct: 513 LMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMS 572
Query: 150 IQPDMCTYNILLDGLCKCGRIKDAQEVFQD-LFKKGYNLNNWTYNTMINGLCKEGLFDEA 208
P + Y L GLC+ G I + ++ L + Y + +CK ++
Sbjct: 573 CVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKV 632
Query: 209 LTLMSKMEDNGCIHDPITFETIISALFEKG 238
+ ++ +M G + + + IIS + + G
Sbjct: 633 MKVVDEMNQEGVFINEVIYCAIISGMSKHG 662
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 61/135 (45%), Gaps = 3/135 (2%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQ-AVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALN 70
P++ Y SL G C + E++ V + + P Y++ + +CK + +
Sbjct: 575 PSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKVMK 634
Query: 71 LLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRG--QPADIITYNSFLDA 128
++ +M+ E + N + Y ++I G+ K G + A E+ E+ R AD++ Y L
Sbjct: 635 VVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTEADMVVYEEMLIE 694
Query: 129 LCKGHHVDKGIALIK 143
K D ++ IK
Sbjct: 695 QTKKKTADLVLSGIK 709
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 108 bits (269), Expect = 5e-24, Method: Composition-based stats.
Identities = 62/239 (25%), Positives = 122/239 (51%), Gaps = 1/239 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ G P+ + C V A++ +++ ++G FP ++YSI I LC++
Sbjct: 776 MIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIG-FPVTVAYSIYIRALCRIGK 834
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ EAL+ L E+ + + TY S++ GL + G + A + ++ M G + Y S
Sbjct: 835 LEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTS 894
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ K ++K + +K+ + +P + TY ++ G G++++A F+++ ++G
Sbjct: 895 LIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERG 954
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ + TY+ IN LC+ ++AL L+S+M D G I F T+ L +G++D A
Sbjct: 955 TSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLA 1013
Score = 90.9 bits (224), Expect = 7e-19, Method: Composition-based stats.
Identities = 57/272 (20%), Positives = 123/272 (45%), Gaps = 34/272 (12%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
MM++G+ + TY L+D +V+ Q++ + M ++ + ++ ++ C
Sbjct: 285 MMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGK 344
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVR----------- 113
+ EAL L++++ ++++ + + L+ GLC+ ++ +A E++D M R
Sbjct: 345 IKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNVYGII 404
Query: 114 -----------------------GQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGI 150
G+P + TY + L K +KG L ++I+ GI
Sbjct: 405 ISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGI 464
Query: 151 QPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALT 210
+PD ++ G R+ +A +VF + +KG +Y+ + LC+ +DE +
Sbjct: 465 EPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIK 524
Query: 211 LMSKMEDNGCIHDPITFETIISALFEKGENDK 242
+ ++M + + F +IS++ + GE +K
Sbjct: 525 IFNQMHASKIVIRDDIFSWVISSMEKNGEKEK 556
Score = 81.6 bits (200), Expect = 4e-16, Method: Composition-based stats.
Identities = 62/245 (25%), Positives = 115/245 (46%), Gaps = 6/245 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+++ M K G ++ T+ L+ Y ++ K VF M + G D +Y+IMI LC
Sbjct: 211 LVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLC 270
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ AL K+M + I TY L+D + K+ KV + D+M + ++
Sbjct: 271 IAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHD 330
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
+ L + C + + + LI+++ +K + D + IL+ GLC+ R+ DA E+ +
Sbjct: 331 AFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIM 390
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL-----F 235
++ + +N Y +I+G ++ +AL ++ +G T+ I+ L F
Sbjct: 391 KRRKLDDSN-VYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQF 449
Query: 236 EKGEN 240
EKG N
Sbjct: 450 EKGCN 454
Score = 75.1 bits (183), Expect = 4e-14, Method: Composition-based stats.
Identities = 58/246 (23%), Positives = 109/246 (44%), Gaps = 13/246 (5%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
V K G V YN+++ ++ + + M + G D+ +++I+I+ K K
Sbjct: 179 VKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAK 238
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
+ + L + ++M + YN +I LC G+ A E EM +G + TY
Sbjct: 239 KIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYK 298
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMC------TYNILLDGLCKCGRIKDAQEVF 177
LD + K VD +++ + D ++ +C + LL C G+IK+A E+
Sbjct: 299 MLLDCIAKSEKVD----VVQSIADDMVR--ICEISEHDAFGYLLKSFCVSGKIKEALELI 352
Query: 178 QDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK 237
++L K L+ + ++ GLC+ +AL ++ M+ + D + IIS +
Sbjct: 353 RELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRK-LDDSNVYGIIISGYLRQ 411
Query: 238 GENDKA 243
+ KA
Sbjct: 412 NDVSKA 417
Score = 70.9 bits (172), Expect = 8e-13, Method: Composition-based stats.
Identities = 55/237 (23%), Positives = 98/237 (41%), Gaps = 34/237 (14%)
Query: 7 KQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVN 66
+ G K N YN + + + +++F M + G +++IMI + + N
Sbjct: 671 RNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTN 730
Query: 67 EALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 126
A+ K+M +IP++ T+ LI LC+
Sbjct: 731 IAIRTFKEMKDMGLIPSSSTFKCLITVLCEK----------------------------- 761
Query: 127 DALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 186
KG +V++ +++I G PD L LC+ G KDA+ L K G+
Sbjct: 762 ----KGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFP 817
Query: 187 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ Y+ I LC+ G +EAL+ ++ E + D T+ +I+ L ++G+ KA
Sbjct: 818 V-TVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKA 873
Score = 67.0 bits (162), Expect = 1e-11, Method: Composition-based stats.
Identities = 54/241 (22%), Positives = 101/241 (41%), Gaps = 3/241 (1%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC--KM 62
M +QG T+ ++ Y N A F M MG+ P ++ +I LC K
Sbjct: 704 MRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKG 763
Query: 63 KMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 122
+ V EA ++M +P+ + LC+ G +A LD + G P + Y
Sbjct: 764 RNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPV-TVAY 822
Query: 123 NSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 182
+ ++ ALC+ +++ ++ + + D TY ++ GL + G ++ A + + +
Sbjct: 823 SIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKE 882
Query: 183 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 242
G Y ++I KE ++ L KME C +T+ +I G+ ++
Sbjct: 883 IGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEE 942
Query: 243 A 243
A
Sbjct: 943 A 943
Score = 60.1 bits (144), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 9/125 (7%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ G++P+ V +++ G+ N V +A VF++M + G+ P SYSI + LC+
Sbjct: 459 MIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSR 518
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+E + + QMH+ KI+ ++ +I + K G+ L+ E+ R NS
Sbjct: 519 YDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGE-KEKIHLIKEIQKRS--------NS 569
Query: 125 FLDAL 129
+ D L
Sbjct: 570 YCDEL 574
Score = 53.5 bits (127), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 51/108 (47%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
V+ K G P V TY +M + + K +FN M + G+ PD ++ + ++ G
Sbjct: 423 VIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQN 482
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMH 111
V EA + M + I P +Y+ + LC++ + ++ ++MH
Sbjct: 483 RVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMH 530
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 117/247 (47%), Gaps = 6/247 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L+V+ K G PNV++Y +LM+ Y + N A+A+F M G P ++Y I++
Sbjct: 161 VLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFV 220
Query: 61 KMKMVNEALNLLKQMHSEK---IIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPA 117
+ EA + + + EK + P+ Y+ +I K G A ++ M +G P
Sbjct: 221 EGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQ 280
Query: 118 DIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVF 177
+TYNS + V K + ++ IQPD+ +Y +L+ + R ++A VF
Sbjct: 281 STVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVF 337
Query: 178 QDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK 237
+++ G + YN +++ G+ ++A T+ M + D ++ T++SA
Sbjct: 338 EEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNA 397
Query: 238 GENDKAE 244
+ + AE
Sbjct: 398 SDMEGAE 404
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 105/225 (46%), Gaps = 7/225 (3%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ + M+ +GV + VTYNSLM EV+K +++ M + + PDV+SY+++I
Sbjct: 269 VFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALLIKAYG 325
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + EAL++ ++M + P YN L+D +G V A + M D+
Sbjct: 326 RARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLW 385
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
+Y + L A ++ K++ G +P++ TY L+ G K ++ EV++ +
Sbjct: 386 SYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKM 445
Query: 181 FKKGYNLNNWTYNTMIN--GLCKEGLFDEALTLMSKMEDNGCIHD 223
G N T+++ G CK F AL +ME G D
Sbjct: 446 RLSGIKANQTILTTIMDASGRCKN--FGSALGWYKEMESCGVPPD 488
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 84/172 (48%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ GV+P YN L+D + + V +A+ VF +M + +FPD+ SY+ M++
Sbjct: 340 MLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASD 399
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ A K++ + PN +TY +LI G K V E+ ++M + G A+ +
Sbjct: 400 MEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTT 459
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 176
+DA + + + K++ G+ PD N+LL +++A+E+
Sbjct: 460 IMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 511
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 85/187 (45%), Gaps = 5/187 (2%)
Query: 49 VLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLD 108
VL + L K +V+E L L+ + + I + LI K G + A +L
Sbjct: 106 VLGTLVRFKQLKKWNLVSEILEWLRYQNWWNF--SEIDFLMLITAYGKLGNFNGAERVLS 163
Query: 109 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCG 168
+ G ++I+Y + +++ +G + A+ +++ G +P TY I+L +
Sbjct: 164 VLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGD 223
Query: 169 RIKDAQEVFQDLF---KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPI 225
+ K+A+EVF+ L K + Y+ MI K G +++A + S M G +
Sbjct: 224 KFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTV 283
Query: 226 TFETIIS 232
T+ +++S
Sbjct: 284 TYNSLMS 290
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 117/247 (47%), Gaps = 6/247 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L+V+ K G PNV++Y +LM+ Y + N A+A+F M G P ++Y I++
Sbjct: 168 VLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFV 227
Query: 61 KMKMVNEALNLLKQMHSEK---IIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPA 117
+ EA + + + EK + P+ Y+ +I K G A ++ M +G P
Sbjct: 228 EGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQ 287
Query: 118 DIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVF 177
+TYNS + V K + ++ IQPD+ +Y +L+ + R ++A VF
Sbjct: 288 STVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVF 344
Query: 178 QDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK 237
+++ G + YN +++ G+ ++A T+ M + D ++ T++SA
Sbjct: 345 EEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNA 404
Query: 238 GENDKAE 244
+ + AE
Sbjct: 405 SDMEGAE 411
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 105/225 (46%), Gaps = 7/225 (3%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ + M+ +GV + VTYNSLM EV+K +++ M + + PDV+SY+++I
Sbjct: 276 VFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALLIKAYG 332
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + EAL++ ++M + P YN L+D +G V A + M D+
Sbjct: 333 RARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLW 392
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
+Y + L A ++ K++ G +P++ TY L+ G K ++ EV++ +
Sbjct: 393 SYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKM 452
Query: 181 FKKGYNLNNWTYNTMIN--GLCKEGLFDEALTLMSKMEDNGCIHD 223
G N T+++ G CK F AL +ME G D
Sbjct: 453 RLSGIKANQTILTTIMDASGRCKN--FGSALGWYKEMESCGVPPD 495
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 84/172 (48%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+ GV+P YN L+D + + V +A+ VF +M + +FPD+ SY+ M++
Sbjct: 347 MLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASD 406
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ A K++ + PN +TY +LI G K V E+ ++M + G A+ +
Sbjct: 407 MEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTT 466
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 176
+DA + + + K++ G+ PD N+LL +++A+E+
Sbjct: 467 IMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 518
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 85/187 (45%), Gaps = 5/187 (2%)
Query: 49 VLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLD 108
VL + L K +V+E L L+ + + I + LI K G + A +L
Sbjct: 113 VLGTLVRFKQLKKWNLVSEILEWLRYQNWWNF--SEIDFLMLITAYGKLGNFNGAERVLS 170
Query: 109 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCG 168
+ G ++I+Y + +++ +G + A+ +++ G +P TY I+L +
Sbjct: 171 VLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGD 230
Query: 169 RIKDAQEVFQDLF---KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPI 225
+ K+A+EVF+ L K + Y+ MI K G +++A + S M G +
Sbjct: 231 KFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTV 290
Query: 226 TFETIIS 232
T+ +++S
Sbjct: 291 TYNSLMS 297
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 123/245 (50%), Gaps = 2/245 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L +M+++ YN + G C+++ + V +M Q PD + + +INGLC
Sbjct: 399 VLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLC 458
Query: 61 KMKMVNEALNLLKQMHSEKI-IPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQ-PAD 118
KM V++A+ +L M + K P+ +T N+++ GL G+ A ++L+ + +
Sbjct: 459 KMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPG 518
Query: 119 IITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 178
++ YN+ + L K H D+ +++ ++ + D TY I++DGLC ++ A++ +
Sbjct: 519 VVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWD 578
Query: 179 DLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
D+ + + Y + GLC+ G +A + + D+G I + + + T+I+ G
Sbjct: 579 DVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSG 638
Query: 239 ENDKA 243
+A
Sbjct: 639 LKREA 643
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 110/233 (47%), Gaps = 4/233 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVF--PDVLSYSIMING 58
+L M++ +P+ T N++++G C + V+ A V + M G F PD ++ + ++ G
Sbjct: 434 VLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDM-MTGKFCAPDAVTLNTVMCG 492
Query: 59 LCKMKMVNEALNLLKQMHSE-KIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPA 117
L EAL++L ++ E KI P + YN++I GL K K A + ++ A
Sbjct: 493 LLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTA 552
Query: 118 DIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVF 177
D TY +D LC + VD VI + D Y L GLC+ G + DA
Sbjct: 553 DSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFL 612
Query: 178 QDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETI 230
DL G N YNT+I + GL EA ++ +M NG D +T+ +
Sbjct: 613 YDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 113/221 (51%), Gaps = 10/221 (4%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M +G P+VVT+ +L+ GYC + E+ A VF+ M G+ P+ L+ S++I G KM+
Sbjct: 188 MRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRD 247
Query: 65 VNEALNLLKQM-----HSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADI 119
V L+K++ + + +L+D +C+ G ++ +E+ + M +
Sbjct: 248 VETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVE 307
Query: 120 ITYNSFLDALCKGHHVDKGIALIKKVI-DKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 178
Y +D+LC+ + + G A I ++ KG++P +YN ++ GLCK G A ++ +
Sbjct: 308 FAYGHMIDSLCR-YRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLE 366
Query: 179 DLFKKGYNLNNWTYNTMINGLCKE---GLFDEALTLMSKME 216
+ + + + +TY ++ LCKE G L LM + E
Sbjct: 367 EGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKE 407
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/255 (18%), Positives = 109/255 (42%), Gaps = 42/255 (16%)
Query: 31 NKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA---------------------- 68
++A + + + G PD L+ S +I+ LC +EA
Sbjct: 72 DEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVI 131
Query: 69 ----------LNLLKQMHS-----EKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVR 113
++ L +H ++ +P+ YN L++ LC +V +A +L+ +M R
Sbjct: 132 IARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNR 191
Query: 114 GQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDA 173
G D++T+ + + C+ ++ + ++ GI+P+ T ++L+ G K ++
Sbjct: 192 GHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETG 251
Query: 174 QEVFQDLFKKGYN-----LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFE 228
+++ ++L++ N + + +++ +C+EG F++ + M ++ +
Sbjct: 252 RKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYG 311
Query: 229 TIISALFEKGENDKA 243
+I +L N A
Sbjct: 312 HMIDSLCRYRRNHGA 326
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 115/242 (47%), Gaps = 2/242 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQ-AVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
M GVKP+VVT+N+L Y + A+ + M V P+V + ++NG C+
Sbjct: 486 MQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEG 545
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
+ EAL +M + PN +NSLI G + E++D M G D++T++
Sbjct: 546 KMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFS 605
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ ++A + + + +++ GI PD+ ++IL G + G + A+++ + K
Sbjct: 606 TLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKF 665
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKM-EDNGCIHDPITFETIISALFEKGENDK 242
G N Y +I+G C G +A+ + KM G + T+ET+I E + K
Sbjct: 666 GVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWK 725
Query: 243 AE 244
AE
Sbjct: 726 AE 727
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 125/246 (50%), Gaps = 2/246 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+++ + K G+KP+ + +N++++ +++A +F M + G P +++ +I G
Sbjct: 376 LISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYG 435
Query: 61 KMKMVNEALNLLKQM-HSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADI 119
K+ + E+ LL M E + PN T N L+ C K+ AW ++ +M G D+
Sbjct: 436 KIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDV 495
Query: 120 ITYNSFLDALCK-GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 178
+T+N+ A + G +I +++ ++P++ T +++G C+ G++++A F
Sbjct: 496 VTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFY 555
Query: 179 DLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
+ + G + N + +N++I G D ++ ME+ G D +TF T+++A G
Sbjct: 556 RMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVG 615
Query: 239 ENDKAE 244
+ + E
Sbjct: 616 DMKRCE 621
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 117/236 (49%), Gaps = 6/236 (2%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
++++G KP+++TY +L+ + ++ + + + G+ PD + ++ +IN +
Sbjct: 344 TLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESG 403
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRG---QPADII 120
+++A+ + ++M P T+N+LI G K GK+ + LLD M +R QP D
Sbjct: 404 NLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLD-MMLRDEMLQPND-R 461
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQE-VFQD 179
T N + A C +++ ++ K+ G++PD+ T+N L + G A++ +
Sbjct: 462 TCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPR 521
Query: 180 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALF 235
+ N T T++NG C+EG +EAL +M++ G + F ++I
Sbjct: 522 MLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFL 577
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 115/243 (47%), Gaps = 3/243 (1%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M + GV PN+ +NSL+ G+ +N+++ V + M + GV PDV+++S ++N +
Sbjct: 557 MKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGD 616
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ + M I P+ ++ L G + G+ A ++L++M G +++ Y
Sbjct: 617 MKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQ 676
Query: 125 FLDALCKGHHVDKGIALIKKVID-KGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ C + K + + KK+ G+ P++ TY L+ G + + A+E+ +D+ K
Sbjct: 677 IISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGK 736
Query: 184 GYNLNNWTYNTMINGLCKEGL--FDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
T + +G G+ ++A TL S + ++ P + S LF KG +
Sbjct: 737 NVVPTRKTMQLIADGWKSIGVSNSNDANTLGSSFSTSSKLNIPNNIASSRSPLFLKGMPE 796
Query: 242 KAE 244
K +
Sbjct: 797 KPK 799
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 85/166 (51%), Gaps = 1/166 (0%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
+M + GVKP+VVT+++LM+ + V ++ + + ++ M + G+ PD+ ++SI+ G +
Sbjct: 591 LMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAG 650
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEM-HVRGQPADIITY 122
+A +L QM + PN + Y +I G C G++ A ++ +M + G ++ TY
Sbjct: 651 EPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTY 710
Query: 123 NSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCG 168
+ + + K L+K + K + P T ++ DG G
Sbjct: 711 ETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIG 756
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 98/198 (49%), Gaps = 1/198 (0%)
Query: 48 DVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELL 107
DV S + ++NGL + EA ++ + E P+ ITY +L+ L + + L+
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 108 DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKC 167
++ G D I +N+ ++A + ++D+ + + +K+ + G +P T+N L+ G K
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 168 GRIKDAQEVFQDLFK-KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPIT 226
G+++++ + + + + N+ T N ++ C + +EA ++ KM+ G D +T
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 227 FETIISALFEKGENDKAE 244
F T+ A G AE
Sbjct: 498 FNTLAKAYARIGSTCTAE 515
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQM-GVFPDVLSYSIMINGL 59
+L M K GV+PNVV Y ++ G+C E+ KA V+ M + G+ P++ +Y +I G
Sbjct: 658 ILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGF 717
Query: 60 CKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNA 103
+ K +A LLK M + ++P T + DG G VSN+
Sbjct: 718 GEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIG-VSNS 760
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 118/239 (49%), Gaps = 1/239 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M K+G++ N + YN+LMD Y N + + + +F M G+ P +Y+I+++ +
Sbjct: 370 MEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQ 429
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSN-AWELLDEMHVRGQPADIITYN 123
+ LL++M + PN +Y LI +T K+S+ A + M G +Y
Sbjct: 430 PDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYT 489
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ + A +K A +++ +GI+P + TY +LD + G E+++ + ++
Sbjct: 490 ALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLRE 549
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 242
TYNT+++G K+GL+ EA ++S+ G +T+ +++A G++ K
Sbjct: 550 KIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAK 608
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 113/235 (48%), Gaps = 1/235 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ M +G+KP+ TYN LMD Y + + + + M +G+ P+V SY+ +I+
Sbjct: 401 LFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYG 460
Query: 61 KMK-MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADI 119
+ K M + A + +M + P++ +Y +LI +G A+ +EM G +
Sbjct: 461 RTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSV 520
Query: 120 ITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
TY S LDA + K + + K ++ + I+ TYN LLDG K G +A++V +
Sbjct: 521 ETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSE 580
Query: 180 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
K G + TYN ++N + G + L+ +M D IT+ T+I A
Sbjct: 581 FSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAF 635
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 116/244 (47%), Gaps = 7/244 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQA-VFNTMTQMGVFPDVLSYSIMINGL 59
+L M G++PNV +Y L+ Y +++ A F M ++G+ P SY+ +I+
Sbjct: 436 LLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAY 495
Query: 60 CKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCK---TGKVSNAWELLDEMHVRGQP 116
+A ++M E I P+ TY S++D + TGK+ W+L+ ++G
Sbjct: 496 SVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGT- 554
Query: 117 ADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 176
ITYN+ LD K + ++ + G+QP + TYN+L++ + G+ ++
Sbjct: 555 --RITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQL 612
Query: 177 FQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFE 236
+++ ++ TY+TMI + F A M +G + DP ++E + + L +
Sbjct: 613 LKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAILED 672
Query: 237 KGEN 240
K +
Sbjct: 673 KAKT 676
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 110/233 (47%), Gaps = 2/233 (0%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKM-KMVNEALNL 71
+V YN+ + G + A V+ M ++ V+PD ++ +I+I L K + E +
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 72 LKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 131
++M + + + + L+ C G A + EM +G ++ I YN+ +DA K
Sbjct: 332 FEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNK 391
Query: 132 GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT 191
+H+++ L ++ DKG++P TYNIL+D + + + + +++ G N +
Sbjct: 392 SNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKS 451
Query: 192 YNTMINGLCK-EGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
Y +I+ + + + D A +M+ G ++ +I A G ++KA
Sbjct: 452 YTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKA 504
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 86/193 (44%), Gaps = 1/193 (0%)
Query: 53 SIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHV 112
S++ L + +M + L LL + ++ + YN+ I GL + + +AWE+ + M
Sbjct: 242 SVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDK 301
Query: 113 RGQPADIITYNSFLDALCKGHHVDKGI-ALIKKVIDKGIQPDMCTYNILLDGLCKCGRIK 171
D +T + L K K + + +K+ +KG++ + L+ C G +
Sbjct: 302 INVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKE 361
Query: 172 DAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 231
+A + ++ KKG N YNT+++ K +E L ++M D G T+ ++
Sbjct: 362 EALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILM 421
Query: 232 SALFEKGENDKAE 244
A + + D E
Sbjct: 422 DAYARRMQPDIVE 434
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G + V YNSL+ C V + A A+ M + G+ PD +Y+I++NG C + EA
Sbjct: 177 GCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEA 236
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
L +M P + LI+GL G + +A E++ +M G DI T+N ++A
Sbjct: 237 QEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEA 296
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
+ K V+ I + G+ D+ TY L+ + K G+I +A + + + G+
Sbjct: 297 ISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPF 356
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKME 216
Y +I G+C+ G+FD+A + S M+
Sbjct: 357 PSLYAPIIKGMCRNGMFDDAFSFFSDMK 384
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 117/243 (48%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
++ M+++G+KP+ TY L++G+C ++ +AQ + M++ G P ++I GL
Sbjct: 204 LIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLL 263
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ A ++ +M +P+ T+N LI+ + K+G+V E+ G DI
Sbjct: 264 NAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDID 323
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TY + + A+ K +D+ L+ ++ G +P Y ++ G+C+ G DA F D+
Sbjct: 324 TYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDM 383
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
K + N Y +I + G F +A + +M + G + F+ + L G++
Sbjct: 384 KVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKH 443
Query: 241 DKA 243
D A
Sbjct: 444 DLA 446
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 95/194 (48%), Gaps = 1/194 (0%)
Query: 47 PDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWEL 106
P + Y + L K +LKQM + + T +I+ K G V A EL
Sbjct: 109 PTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVEL 168
Query: 107 LDEM-HVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLC 165
+ + G + YNS L ALC ALI+++I KG++PD TY IL++G C
Sbjct: 169 FNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWC 228
Query: 166 KCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPI 225
G++K+AQE ++ ++G+N + +I GL G + A ++SKM G + D
Sbjct: 229 SAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQ 288
Query: 226 TFETIISALFEKGE 239
TF +I A+ + GE
Sbjct: 289 TFNILIEAISKSGE 302
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 81/178 (45%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M++ M K G P++ T+N L++ EV ++ T ++G+ D+ +Y +I +
Sbjct: 274 MVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVS 333
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K+ ++EA LL + P Y +I G+C+ G +A+ +M V+ P +
Sbjct: 334 KIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRP 393
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 178
Y + +G + ++ + G+ P ++++ DGL G+ A + Q
Sbjct: 394 VYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRIEQ 451
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 108/234 (46%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L +KQG+ P Y L+ G+C + V +TM FP + Y +I GLC
Sbjct: 235 LLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLC 294
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K EA + K + + P+ + Y ++I G C+ G + +A +L EM +G +
Sbjct: 295 MNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEF 354
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
YN + K + A +++ G M + N ++ G C G+ +A E+F+++
Sbjct: 355 AYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNM 414
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
+ G N TYN +I G CKE ++ L L +++ G + + ++ L
Sbjct: 415 SETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNL 468
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 105/240 (43%), Gaps = 2/240 (0%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
V+ G+ +VVT NS++ G ++++ + M + D +I LC
Sbjct: 170 VLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEF--DSERIRCLIRALCDGG 227
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
V+E LLKQ + + P Y LI G C+ G + E+L M + Y
Sbjct: 228 DVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQ 287
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ LC + + K + DKG PD Y ++ G C+ G + A++++ ++ KK
Sbjct: 288 KIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKK 347
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
G N + YN MI+G K G ++M NG ++ T+I G++D+A
Sbjct: 348 GMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEA 407
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 100/224 (44%)
Query: 20 LMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEK 79
L+ C +V++ + + G+ P Y+ +I+G C++ +L M +
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWN 278
Query: 80 IIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGI 139
P+ Y +I GLC K A+ + + +G D + Y + + C+ +
Sbjct: 279 HFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSAR 338
Query: 140 ALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGL 199
L ++I KG++P+ YN+++ G K G I + + ++ + GY + NTMI G
Sbjct: 339 KLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGF 398
Query: 200 CKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
C G DEA + M + G + IT+ +I ++ + +K
Sbjct: 399 CSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKG 442
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 9/224 (4%)
Query: 15 VTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQ 74
+ + +L+DG V A++ +T G P+ + L + +V EA+ +
Sbjct: 118 ILFGALLDG----KAVKAAKSFLDTT---GFKPEPTLLEQYVKCLSEEGLVEEAIEVYNV 170
Query: 75 MHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 134
+ I + +T NS++ G K K+ WEL EM ++ I + ALC G
Sbjct: 171 LKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERI--RCLIRALCDGGD 228
Query: 135 VDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 194
V +G L+K+ + +G+ P Y L+ G C+ G EV + + + + Y
Sbjct: 229 VSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQK 288
Query: 195 MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
+I GLC EA + ++D G D + + T+I EKG
Sbjct: 289 IIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKG 332
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 58/102 (56%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ G +++ N+++ G+C + ++A +F M++ GV P+ ++Y+ +I G CK
Sbjct: 379 MLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENK 438
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWEL 106
V + L L K++ + + P+ + Y +L+ L + V+ + L
Sbjct: 439 VEKGLKLYKELKALGLKPSGMAYAALVRNLKMSDSVATSLNL 480
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 19/217 (8%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVF--PDVLSYSIMINGLCKMKMVN-- 66
KP+V YN++++ C V KA+ + + M G PD +Y+I+I+ C+ M
Sbjct: 197 KPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGC 256
Query: 67 ---------EALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPA 117
EA + ++M +P+ +TYN LIDG CKT ++ A EL ++M +G
Sbjct: 257 RKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVP 316
Query: 118 DIITYNSFLDALCKGHHVDKGIALIK--KVIDKGIQPDMCTYNILLDGLCKCGRIKDAQE 175
+ +TYNSF+ + ++ I +++ K + G+ P TY L+ L + R +A++
Sbjct: 317 NQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGV-PGSSTYTPLIHALVETRRAAEARD 375
Query: 176 VFQDLFKKGYNLNNWTYNTMINGLCKEGL---FDEAL 209
+ ++ + G +TY + + L EGL DE L
Sbjct: 376 LVVEMVEAGLVPREYTYKLVCDALSSEGLASTLDEEL 412
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 109/243 (44%), Gaps = 20/243 (8%)
Query: 22 DGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK------MVNEALNLLKQM 75
D CL+ + N + +++ + Q+ + + + C MK V EAL +M
Sbjct: 132 DMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRM 191
Query: 76 HSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRG--QPADIITYNSFLDALCK-- 131
P+ YN++I+ LC+ G A LLD+M + G P D TY + + C+
Sbjct: 192 KEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYG 251
Query: 132 ---------GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 182
+ + + ++++ +G PD+ TYN L+DG CK RI A E+F+D+
Sbjct: 252 MQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKT 311
Query: 183 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG-CIHDPITFETIISALFEKGEND 241
KG N TYN+ I + A+ +M M+ G + T+ +I AL E
Sbjct: 312 KGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAA 371
Query: 242 KAE 244
+A
Sbjct: 372 EAR 374
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 14/186 (7%)
Query: 12 PNVVTYNSLMDGYC-----------LVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
P+ TY L+ YC + + +A +F M G PDV++Y+ +I+G C
Sbjct: 235 PDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCC 294
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQ--PAD 118
K + AL L + M ++ +PN +TYNS I T ++ A E++ M G P
Sbjct: 295 KTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGS 354
Query: 119 IITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 178
TY + AL + + L+ ++++ G+ P TY ++ D L G E
Sbjct: 355 -STYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLASTLDEELH 413
Query: 179 DLFKKG 184
++G
Sbjct: 414 KRMREG 419
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 5/154 (3%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M M+ +G P+VVTYN L+DG C N + +A +F M G P+ ++Y+ I
Sbjct: 270 MFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYS 329
Query: 61 KMKMVNEALNLLKQMHSEKI---IPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPA 117
+ A+ +++ M +K+ +P + TY LI L +T + + A +L+ EM G
Sbjct: 330 VTNEIEGAIEMMRTM--KKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVP 387
Query: 118 DIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQ 151
TY DAL + K + +GIQ
Sbjct: 388 REYTYKLVCDALSSEGLASTLDEELHKRMREGIQ 421
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 104 bits (260), Expect = 4e-23, Method: Composition-based stats.
Identities = 70/229 (30%), Positives = 117/229 (51%), Gaps = 5/229 (2%)
Query: 10 VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMV--NE 67
V V YN++M Y + +KAQ + + M Q G PD++S++ +IN K + N
Sbjct: 221 VGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNL 280
Query: 68 ALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHV-RGQPADIITYNSFL 126
A+ LL + + + P+ ITYN+L+ + + A ++ ++M R QP D+ TYN+ +
Sbjct: 281 AVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQP-DLWTYNAMI 339
Query: 127 DALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 186
+ + L ++ KG PD TYN LL + + +EV+Q + K G+
Sbjct: 340 SVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFG 399
Query: 187 LNNWTYNTMINGLCKEGLFDEALTLMSKMED-NGCIHDPITFETIISAL 234
+ TYNT+I+ K+G D AL L M+ +G D IT+ +I +L
Sbjct: 400 KDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSL 448
Score = 93.2 bits (230), Expect = 1e-19, Method: Composition-based stats.
Identities = 60/247 (24%), Positives = 126/247 (51%), Gaps = 3/247 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEV--NKAQAVFNTMTQMGVFPDVLSYSIMING 58
++ M ++G P+++++N+L++ + N A + + + G+ PD ++Y+ +++
Sbjct: 247 LVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSA 306
Query: 59 LCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPAD 118
+ ++ A+ + + M + + P+ TYN++I + G + A L E+ ++G D
Sbjct: 307 CSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPD 366
Query: 119 IITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 178
+TYNS L A + + +K + +++ G D TYN ++ K G++ A ++++
Sbjct: 367 AVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYK 426
Query: 179 DLFK-KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK 237
D+ G N + TY +I+ L K EA LMS+M D G T+ +I +
Sbjct: 427 DMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKA 486
Query: 238 GENDKAE 244
G+ ++AE
Sbjct: 487 GKREEAE 493
Score = 89.4 bits (220), Expect = 2e-18, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 111/218 (50%), Gaps = 3/218 (1%)
Query: 28 NEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITY 87
N+ + A +F T + V V Y+ M+ + ++A L+ M +P+ I++
Sbjct: 205 NQESLAVEIF-TRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISF 263
Query: 88 NSLIDGLCKTGKVSN--AWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKV 145
N+LI+ K+G ++ A ELLD + G D ITYN+ L A + ++D + + + +
Sbjct: 264 NTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDM 323
Query: 146 IDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLF 205
QPD+ TYN ++ +CG +A+ +F +L KG+ + TYN+++ +E
Sbjct: 324 EAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNT 383
Query: 206 DEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
++ + +M+ G D +T+ TII ++G+ D A
Sbjct: 384 EKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLA 421
Score = 87.0 bits (214), Expect = 9e-18, Method: Composition-based stats.
Identities = 59/242 (24%), Positives = 117/242 (48%), Gaps = 4/242 (1%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
+ + G P++ T+NSLM Y +A+A+FNTM + G P V S +I+++ LC
Sbjct: 778 LRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGR 837
Query: 65 VNEALNLLKQMHSE--KIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 122
+ E +++++ KI ++I ++D + G + ++ M G I Y
Sbjct: 838 LEELYVVVEELQDMGFKISKSSILL--MLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLY 895
Query: 123 NSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 182
++ LCKG V ++ ++ + + ++ +N +L K +V+Q + +
Sbjct: 896 RMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKE 955
Query: 183 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 242
G + TYNT+I C++ +E LM +M + G T++++ISA ++ ++
Sbjct: 956 TGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQ 1015
Query: 243 AE 244
AE
Sbjct: 1016 AE 1017
Score = 84.3 bits (207), Expect = 6e-17, Method: Composition-based stats.
Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 1/177 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQM-GVFPDVLSYSIMINGLCKMK 63
M K G + +TYN+++ Y +++ A ++ M + G PD ++Y+++I+ L K
Sbjct: 393 MQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKAN 452
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
EA L+ +M I P TY++LI G K GK A + M G D + Y+
Sbjct: 453 RTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYS 512
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
LD L +G+ K L + +I G P Y +++ GL K R D Q+ +D+
Sbjct: 513 VMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDM 569
Score = 77.8 bits (190), Expect = 6e-15, Method: Composition-based stats.
Identities = 48/225 (21%), Positives = 101/225 (44%)
Query: 20 LMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEK 79
++D + + + + ++++M G P + Y +MI LCK K V +A ++ +M
Sbjct: 863 MLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEAN 922
Query: 80 IIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGI 139
+NS++ ++ + G D TYN+ + C+ ++G
Sbjct: 923 FKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGY 982
Query: 140 ALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGL 199
L++++ + G+ P + TY L+ K ++ A+++F++L KG L+ Y+TM+
Sbjct: 983 LLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKIS 1042
Query: 200 CKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
G +A L+ M++ G T ++ + G +AE
Sbjct: 1043 RDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAE 1087
Score = 76.6 bits (187), Expect = 2e-14, Method: Composition-based stats.
Identities = 47/219 (21%), Positives = 102/219 (46%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M++ M + K + +NS++ Y + + K V+ + + G+ PD +Y+ +I C
Sbjct: 914 MVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYC 973
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + E L++QM + + P TY SLI K + A +L +E+ +G D
Sbjct: 974 RDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRS 1033
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
Y++ + K L++ + + GI+P + T ++L+ G ++A++V +L
Sbjct: 1034 FYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNL 1093
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 219
L Y+++I+ + ++ + + +M+ G
Sbjct: 1094 KDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEG 1132
Score = 62.8 bits (151), Expect = 2e-10, Method: Composition-based stats.
Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 8/182 (4%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+++ M+ G+KP + TY++L+ GY + +A+ F+ M + G PD L+YS+M++ L
Sbjct: 460 LMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLL 519
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMH--VRGQPAD 118
+ +A L + M S+ P+ Y +I GL K + + + + +M P +
Sbjct: 520 RGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLE 579
Query: 119 IITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 178
I + L KG D +K I G + + T +L GR +A E+ +
Sbjct: 580 ISS------VLVKGECFDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLE 633
Query: 179 DL 180
L
Sbjct: 634 FL 635
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 117/233 (50%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G P+ ++N +++ ++ +F + ++GV D +I+I GLC+ + A
Sbjct: 162 GCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAA 221
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
L LL + +K PN +T++ LI G C GK A++LL+ M D IT+N +
Sbjct: 222 LQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISG 281
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
L K V++GI L++++ KG +P+ TY +L GL R +A+E+ + G +
Sbjct: 282 LRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPS 341
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
+Y M+ GLC+ E ++ +M ++G + + + ++ + K +D
Sbjct: 342 FLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCVVSKNNDD 394
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 89/179 (49%)
Query: 7 KQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVN 66
K GV+ + N L+ G C + A + + Q P+V+++S +I G C
Sbjct: 195 KLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFE 254
Query: 67 EALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 126
EA LL++M E+I P+TIT+N LI GL K G+V +LL+ M V+G + TY L
Sbjct: 255 EAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVL 314
Query: 127 DALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 185
L + ++ ++I G++P +Y ++ GLC+ + + V + + G+
Sbjct: 315 YGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGF 373
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 2/190 (1%)
Query: 52 YSIMINGLCKMKMVNEALNLLKQMHSEKI--IPNTITYNSLIDGLCKTGKVSNAWELLDE 109
Y++MIN + KM +E +++ + EK YN + G+++ A E+L
Sbjct: 98 YALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFG 157
Query: 110 MHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGR 169
M G ++N L+ L D+ + G++ D C NIL+ GLC+ G
Sbjct: 158 MPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGN 217
Query: 170 IKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFET 229
++ A ++ + ++ N T++ +I G C +G F+EA L+ +ME D ITF
Sbjct: 218 LEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNI 277
Query: 230 IISALFEKGE 239
+IS L +KG
Sbjct: 278 LISGLRKKGR 287
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 79/146 (54%)
Query: 7 KQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVN 66
+Q +PNV+T++ L+ G+C + +A + M + + PD ++++I+I+GL K V
Sbjct: 230 QQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVE 289
Query: 67 EALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 126
E ++LL++M + PN TY ++ GL + A E++ +M G ++Y +
Sbjct: 290 EGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMV 349
Query: 127 DALCKGHHVDKGIALIKKVIDKGIQP 152
LC+ V + +++++++ G P
Sbjct: 350 LGLCETKSVVEMDWVLRQMVNHGFVP 375
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 96/187 (51%), Gaps = 14/187 (7%)
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHV-------RGQPA 117
+N A+ +L M P++ ++N +++ L +L DE+H G
Sbjct: 148 INRAIEILFGMPDFGCWPSSKSFNFILNLLVSA-------KLFDEIHKIFVSAPKLGVEI 200
Query: 118 DIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVF 177
D N + LC+ +++ + L+ + + +P++ T++ L+ G C G+ ++A ++
Sbjct: 201 DACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLL 260
Query: 178 QDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK 237
+ + K+ + T+N +I+GL K+G +E + L+ +M+ GC +P T++ ++ L +K
Sbjct: 261 ERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDK 320
Query: 238 GENDKAE 244
N +A+
Sbjct: 321 KRNLEAK 327
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 100/194 (51%), Gaps = 4/194 (2%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G PNV +YN LM+ YC +++A+ V+ M GV D+++Y+ MI GLC V +A
Sbjct: 276 GCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKA 335
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
L + M + I +TY L++G CK G V + + EM +G AD +T + ++
Sbjct: 336 KELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEG 395
Query: 129 LCK---GHHVDKGIALIKKVIDKGI-QPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
LC G V + ++K + + + P Y +L+ LC+ G++ A + ++ KG
Sbjct: 396 LCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKG 455
Query: 185 YNLNNWTYNTMING 198
+ + TY I+G
Sbjct: 456 FKPSQETYRAFIDG 469
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 36/192 (18%)
Query: 10 VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQ-MGVFPDVLSYSIMINGLCKMKMVNEA 68
+KPN T+NS+M + E + ++ M + +G P+V S
Sbjct: 241 IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYS----------------- 283
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
YN L++ C G +S A ++ +EM VRG DI+ YN+ +
Sbjct: 284 ------------------YNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGG 325
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
LC V K L + + KGI+ TY L++G CK G + V++++ +KG+ +
Sbjct: 326 LCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEAD 385
Query: 189 NWTYNTMINGLC 200
T ++ GLC
Sbjct: 386 GLTIEALVEGLC 397
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
Query: 8 QGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK---M 64
+G++ +TY L++GYC +V+ V+ M + G D L+ ++ GLC +
Sbjct: 345 KGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQR 404
Query: 65 VNEALNLLKQMHSEKII-PNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
V EA +++K E + P+ Y L+ LC+ GK+ A + EM +G TY
Sbjct: 405 VVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYR 464
Query: 124 SFLDA 128
+F+D
Sbjct: 465 AFIDG 469
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 99/212 (46%), Gaps = 25/212 (11%)
Query: 34 QAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDG 93
+++ + + G P V + ++I K ++ A+ +++++ S I T N+LI
Sbjct: 149 RSLIKSYNRCGSAPFV--FDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITE 206
Query: 94 LCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPD 153
+ + SN +++ E+ LD D + KK+I K I+P+
Sbjct: 207 VSRRRGASNGYKMYREVF-------------GLD--------DVSVDEAKKMIGK-IKPN 244
Query: 154 MCTYNILLDGLCKCGRIKDAQEVFQDLFKK-GYNLNNWTYNTMINGLCKEGLFDEALTLM 212
T+N ++ + G + + +++++ ++ G + N ++YN ++ C GL EA +
Sbjct: 245 ATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVW 304
Query: 213 SKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+M+ G ++D + + T+I L E KA+
Sbjct: 305 EEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAK 336
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 128/241 (53%), Gaps = 1/241 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMT-QMGVFPDVLSYSIMINGLCKMK 63
M + K +V+++N+L+ Y L + + + +FN + ++ + PD++SY+ +I LC+
Sbjct: 135 MPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKD 194
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
+ EA+ LL ++ ++ + P+ +T+N+L+ G+ E+ +M + DI TYN
Sbjct: 195 SLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYN 254
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ L L + + L ++ G++PD+ ++N ++ G G++ +A+ ++++ K
Sbjct: 255 ARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKH 314
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
GY + T+ ++ +CK G F+ A+ L + + T + ++ L + + ++A
Sbjct: 315 GYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEA 374
Query: 244 E 244
E
Sbjct: 375 E 375
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 82/171 (47%)
Query: 8 QGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNE 67
+G+KP++VT+N+L+ L + + ++ M + V D+ +Y+ + GL E
Sbjct: 209 KGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKE 268
Query: 68 ALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 127
+NL ++ + + P+ ++N++I G GK+ A E+ G D T+ L
Sbjct: 269 LVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLP 328
Query: 128 ALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 178
A+CK + I L K+ K T L+D L K + ++A+E+ +
Sbjct: 329 AMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIVK 379
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 81/185 (43%), Gaps = 36/185 (19%)
Query: 96 KTGKVSNAWELLDEMHVRGQPADIITYNSFLD---------------------------- 127
K G NA ++ +EM R ++++N+ L
Sbjct: 121 KAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDI 180
Query: 128 --------ALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
ALC+ + + +AL+ ++ +KG++PD+ T+N LL G+ + +E++
Sbjct: 181 VSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAK 240
Query: 180 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
+ +K ++ TYN + GL E E + L +++ +G D +F +I +G+
Sbjct: 241 MVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGK 300
Query: 240 NDKAE 244
D+AE
Sbjct: 301 MDEAE 305
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 4/143 (2%)
Query: 3 AVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAV--FNTMTQMGVFPDVLSYSIMINGLC 60
A M+++ V ++ TYN+ + G L NE + V F + G+ PDV S++ MI G
Sbjct: 239 AKMVEKNVAIDIRTYNARLLG--LANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSI 296
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++EA K++ P+ T+ L+ +CK G +A EL E +
Sbjct: 297 NEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQT 356
Query: 121 TYNSFLDALCKGHHVDKGIALIK 143
T +D L KG ++ ++K
Sbjct: 357 TLQQLVDELVKGSKREEAEEIVK 379
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 101 bits (252), Expect = 4e-22, Method: Composition-based stats.
Identities = 58/222 (26%), Positives = 117/222 (52%), Gaps = 5/222 (2%)
Query: 1 MLAVMMKQGVK---PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMIN 57
ML M +Q + P+ VTY +++ + +++A+ V M +MGV + ++Y++++
Sbjct: 436 MLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLK 495
Query: 58 GLCKMKMVNEALNLLKQMHSEK-IIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQP 116
G CK ++ A +LL++M + I P+ ++YN +IDG + A +EM RG
Sbjct: 496 GYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIA 555
Query: 117 ADIITYNSFLDALCKGHHVDKGIALIKKVI-DKGIQPDMCTYNILLDGLCKCGRIKDAQE 175
I+Y + + A + +++ D ++ D+ +N+L++G C+ G I+DAQ
Sbjct: 556 PTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQR 615
Query: 176 VFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMED 217
V + + G+ N TY ++ NG+ + +AL L ++++
Sbjct: 616 VVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKE 657
Score = 89.4 bits (220), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/230 (24%), Positives = 108/230 (46%), Gaps = 9/230 (3%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQM---GVFPDVLSYSIMINGLCKMKMVNEA 68
P+ Y +LM GY V + M + PD ++Y+ +++ +++ A
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEM-HVRGQPADIITYNSFLD 127
+L +M + N ITYN L+ G CK ++ A +LL EM G D+++YN +D
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531
Query: 128 ALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF---KKG 184
+A ++ +GI P +Y L+ G+ K A VF ++ +
Sbjct: 532 GCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVK 591
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
+L W N ++ G C+ GL ++A ++S+M++NG + T+ ++ + +
Sbjct: 592 VDLIAW--NMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGV 639
Score = 73.2 bits (178), Expect = 1e-13, Method: Composition-based stats.
Identities = 55/256 (21%), Positives = 105/256 (41%), Gaps = 53/256 (20%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQ-MGVFPDVLSYSIMINGL 59
+LA M + GV N +TYN L+ GYC ++++A+ + MT+ G+ PDV+SY+I+I+G
Sbjct: 474 VLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGC 533
Query: 60 CKMKMVNEALNLLKQMHSEKIIPNTITY-------------------------------- 87
+ AL +M + I P I+Y
Sbjct: 534 ILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVD 593
Query: 88 ----NSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIK 143
N L++G C+ G + +A ++ M G ++ TY S + + + + L K
Sbjct: 594 LIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWK 653
Query: 144 KVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEG 203
++ ++ C + + + D + +T+ + +
Sbjct: 654 EIKER----------------CAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAA 697
Query: 204 LFDEALTLMSKMEDNG 219
F +AL +++ ME+NG
Sbjct: 698 FFKKALEIIACMEENG 713
Score = 51.6 bits (122), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/168 (20%), Positives = 77/168 (45%), Gaps = 13/168 (7%)
Query: 33 AQAVFNTMTQMGVFPDVLSYSIMINGLC---------KMKMVNEALNLLKQMHSEKII-- 81
A +V +M + G P V +++ + L +K+ +K+ + ++
Sbjct: 172 AVSVIKSMIRSGYLPHVKAWTAAVASLSASGDDGPEESIKLFIAITRRVKRFGDQSLVGQ 231
Query: 82 --PNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGI 139
P+T +N++++ G W+L +EM D++TYN + + + +
Sbjct: 232 SRPDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIV 291
Query: 140 ALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
+++++IDKGI+ M T + L+ G ++ A+ + Q + +K +L
Sbjct: 292 FVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDL 339
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 112/240 (46%), Gaps = 4/240 (1%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNE--VNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKM 62
M+ G P +YNS++ CL E + ++ N + ++ PDV +Y I++N LCK
Sbjct: 503 MVNLGCTPLPFSYNSVIK--CLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKK 560
Query: 63 KMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 122
+ A ++ M + P Y+S+I L K G+V A E +M G D I Y
Sbjct: 561 NDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAY 620
Query: 123 NSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 182
++ + +D+ L+++V+ ++P TY +L+ G K G ++ + + +
Sbjct: 621 MIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLE 680
Query: 183 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 242
G + N Y +I K+G F + TL M +N HD I + T++S L+ K
Sbjct: 681 DGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKK 740
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 109/241 (45%), Gaps = 2/241 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
++ G P+ + + ++D C + +A F + + G + + GLC
Sbjct: 157 IIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGH 216
Query: 65 VNEALNLLKQMHSEKIIPNTIT-YNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
+NEA+ +L + +P + Y SL CK G + A L D M V G D + Y
Sbjct: 217 LNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYT 276
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ CK +++ + L +++++ + D C +N L+ G K G + + +F + KK
Sbjct: 277 CLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKK 336
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPI-TFETIISALFEKGENDK 242
G N +TY+ MI CKEG D AL L + I + + +I ++KG DK
Sbjct: 337 GVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDK 396
Query: 243 A 243
A
Sbjct: 397 A 397
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 119/282 (42%), Gaps = 47/282 (16%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
M + G++P V Y+S++ V +A+ F M + G+ PD ++Y IMIN +
Sbjct: 572 AMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNG 631
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
++EA L++++ + P++ TY LI G K G + + LD+M G +++ Y
Sbjct: 632 RIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYT 691
Query: 124 SFLDALCKGHHVDKG-----IALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV-- 176
+ + GH + KG L + + I+ D Y LL GL + K ++V
Sbjct: 692 ALI-----GHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIV 746
Query: 177 -------FQDLF----------------------------KKGYNLNNWTYNTMINGLCK 201
Q L KK N + +NT+I G C
Sbjct: 747 EPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCA 806
Query: 202 EGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
G DEA + M+ G + + +T+ ++ + E G+ + A
Sbjct: 807 AGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESA 848
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 108/253 (42%), Gaps = 30/253 (11%)
Query: 15 VTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQ 74
V Y LM YC N + A ++ M + D ++ +I+G K+ M+++ + Q
Sbjct: 273 VMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQ 332
Query: 75 MHSEKIIPNTITYNSLIDGLCKTGKVSNAWEL-LDEMHVRGQPADIITYNSFLDALCKGH 133
M + + N TY+ +I CK G V A L ++ ++ Y + + K
Sbjct: 333 MIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKG 392
Query: 134 HVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYN 193
+DK + L+ +++D GI PD TY +LL L KC +K A + Q + G +N +
Sbjct: 393 GMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVID 452
Query: 194 TMIN-----------------------------GLCKEGLFDEALTLMSKMEDNGCIHDP 224
+ N LC + + AL+ + KM + GC P
Sbjct: 453 DLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLP 512
Query: 225 ITFETIISALFEK 237
++ ++I LF++
Sbjct: 513 FSYNSVIKCLFQE 525
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 97/186 (52%), Gaps = 3/186 (1%)
Query: 6 MKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMV 65
+K+ + PN+ +N+++ GYC +++A +M + G+ P++++Y+I++ + +
Sbjct: 786 VKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDI 845
Query: 66 NEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 125
A++L + + E P+ + Y++L+ GLC + +A L+ EM G + +Y
Sbjct: 846 ESAIDLFEGTNCE---PDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKL 902
Query: 126 LDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 185
L LC + + ++K + I P + L+ LC+ ++++A+ +F + + G
Sbjct: 903 LQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSGR 962
Query: 186 NLNNWT 191
+L N T
Sbjct: 963 SLLNCT 968
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 111/270 (41%), Gaps = 40/270 (14%)
Query: 2 LAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCK 61
A M++ G++P+ + Y +++ Y +++A + + + + P +Y+++I+G K
Sbjct: 605 FAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVK 664
Query: 62 MKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 121
M M+ + L +M + + PN + Y +LI K G ++ L M D I
Sbjct: 665 MGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIA 724
Query: 122 YNSFLDALCK------------------------------------GHHVDKGIAL-IKK 144
Y + L L + G++ K A+ +
Sbjct: 725 YITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIG 784
Query: 145 VIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGL 204
+ K I P++ +N ++ G C GR+ +A + + K+G N TY ++ + G
Sbjct: 785 KVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGD 844
Query: 205 FDEALTLMSKMEDNGCIHDPITFETIISAL 234
+ A+ L E C D + + T++ L
Sbjct: 845 IESAIDL---FEGTNCEPDQVMYSTLLKGL 871
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 103/248 (41%), Gaps = 40/248 (16%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ G+ PNVV Y +L+ + + + +F M + + D ++Y +++GL +
Sbjct: 678 MLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMA 737
Query: 65 VNEALNLLKQMHSEK-------------------------------------IIPNTITY 87
+ ++ + EK IIPN +
Sbjct: 738 RKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLH 797
Query: 88 NSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVID 147
N++I G C G++ A+ L+ M G +++TY + + + ++ I L +
Sbjct: 798 NTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEGT-- 855
Query: 148 KGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDE 207
+PD Y+ LL GLC R DA + ++ K G N N +Y ++ LC L E
Sbjct: 856 -NCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTME 914
Query: 208 ALTLMSKM 215
A+ ++ M
Sbjct: 915 AVKVVKDM 922
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 118/273 (43%), Gaps = 31/273 (11%)
Query: 1 MLAVMMKQGVKPNVVTY--------------------NSLMDGYCLVN----------EV 30
+L M+ G+ P+ +TY S++D C +N EV
Sbjct: 400 LLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEV 459
Query: 31 NKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSL 90
K +++ + + + +++ LC + AL+ +++M + P +YNS+
Sbjct: 460 -KVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSV 518
Query: 91 IDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGI 150
I L + + + L++ + D+ TY ++ LCK + D A+I + + G+
Sbjct: 519 IKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGL 578
Query: 151 QPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALT 210
+P + Y+ ++ L K GR+ +A+E F + + G + Y MIN + G DEA
Sbjct: 579 RPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANE 638
Query: 211 LMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
L+ ++ + T+ +IS + G +K
Sbjct: 639 LVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKG 671
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 125/274 (45%), Gaps = 30/274 (10%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVF-NTMTQMGVFPDVLSYSIMINGL 59
M + M+K+GV+ NV TY+ ++ YC V+ A +F N + +V Y+ +I G
Sbjct: 329 MFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGF 388
Query: 60 CKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLD----------- 108
K +++A++LL +M I+P+ ITY L+ L K ++ A +L
Sbjct: 389 YKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINP 448
Query: 109 ---------EMHVRGQPADIITYNSFL---------DALCKGHHVDKGIALIKKVIDKGI 150
E+ V +I ++ L ALC + ++ I+K+++ G
Sbjct: 449 PVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGC 508
Query: 151 QPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALT 210
P +YN ++ L + I+D + + + + + TY ++N LCK+ D A
Sbjct: 509 TPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFA 568
Query: 211 LMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
++ ME+ G + +II +L ++G +AE
Sbjct: 569 IIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAE 602
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 99/238 (41%), Gaps = 2/238 (0%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFN-TMTQMGVFPDVLSYSIMINGLCKMKMVNE 67
G++ + Y +L+ + + A+ +N + G+ PD M+ L K++ +E
Sbjct: 90 GIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDE 149
Query: 68 ALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 127
A L ++ + P+ + + ++D LC + A+ +++ RG +
Sbjct: 150 ARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFK 209
Query: 128 ALCKGHHVDKGIALIKKVIDKGIQP-DMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 186
LC H+++ I ++ + P + Y L CK G +A+ +F + GY
Sbjct: 210 GLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYY 269
Query: 187 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
++ Y ++ CK+ A+ L +M + DP F T+I + G DK
Sbjct: 270 VDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGR 327
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 3/163 (1%)
Query: 2 LAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCK 61
L M K+G+ PN+VTY LM + ++ A +F PD + YS ++ GLC
Sbjct: 817 LESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEGTN---CEPDQVMYSTLLKGLCD 873
Query: 62 MKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 121
K +AL L+ +M I PN +Y L+ LC + A +++ +M I
Sbjct: 874 FKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSIN 933
Query: 122 YNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGL 164
+ + LC+ + + AL ++ G CT LL L
Sbjct: 934 HTWLIYILCEEKKLREARALFAIMVQSGRSLLNCTKPGLLKML 976
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 115/234 (49%), Gaps = 4/234 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ MM GV P+ TYN+L+ + +K + M + G D + Y +I+
Sbjct: 527 LFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFV 586
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K+ +N A + K+M I P+ + Y LI+ TG V A ++ M G P + +
Sbjct: 587 KLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSV 646
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVI---DKGIQPDMCTYNILLDGLCKCGRIKDAQEVF 177
YNS + K ++D+ A+ +K++ +K PD+ T N +++ + ++ A+ +F
Sbjct: 647 IYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIF 706
Query: 178 QDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 231
+ ++G N +T+ M+ K G F+EA + +M + + DP+++ +++
Sbjct: 707 DSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVL 759
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 119/245 (48%), Gaps = 4/245 (1%)
Query: 2 LAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCK 61
L M + G + + Y +++ + + ++N A+ V+ M + + PDV+ Y ++IN
Sbjct: 563 LEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFAD 622
Query: 62 MKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNA---WELLDEMHVRGQPAD 118
V +A++ ++ M I N++ YNSLI K G + A + L + + Q D
Sbjct: 623 TGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPD 682
Query: 119 IITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 178
+ T N ++ + V K A+ + +G + + T+ ++L K GR ++A ++ +
Sbjct: 683 VYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAK 741
Query: 179 DLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
+ + + +YN+++ +G F EA+ +M +G D TF+++ + L + G
Sbjct: 742 QMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLG 801
Query: 239 ENDKA 243
+ KA
Sbjct: 802 MSKKA 806
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 109/241 (45%), Gaps = 6/241 (2%)
Query: 6 MKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMV 65
MK P+ TYN L+ + N++ +A A F M G+ PD +SY ++ MV
Sbjct: 359 MKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMV 418
Query: 66 NEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 125
EA L+ +M + + + T ++L + + +W HV G + Y++
Sbjct: 419 EEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSS-EGYSAN 477
Query: 126 LDALCKGHHVDKG--IALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+DA + ++ + + + + ++K + YN+++ + A E+F+ +
Sbjct: 478 IDAYGERGYLSEAERVFICCQEVNKRT---VIEYNVMIKAYGISKSCEKACELFESMMSY 534
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
G + TYNT++ L + + + KM + G + D I + +IS+ + G+ + A
Sbjct: 535 GVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMA 594
Query: 244 E 244
E
Sbjct: 595 E 595
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 93/199 (46%), Gaps = 1/199 (0%)
Query: 17 YNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMH 76
Y++ +D Y +++A+ VF ++ V+ Y++MI K +A L + M
Sbjct: 474 YSANIDAYGERGYLSEAERVFICCQEVNK-RTVIEYNVMIKAYGISKSCEKACELFESMM 532
Query: 77 SEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVD 136
S + P+ TYN+L+ L L++M G +D I Y + + + K ++
Sbjct: 533 SYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLN 592
Query: 137 KGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMI 196
+ K++++ I+PD+ Y +L++ G ++ A + + + G N+ YN++I
Sbjct: 593 MAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLI 652
Query: 197 NGLCKEGLFDEALTLMSKM 215
K G DEA + K+
Sbjct: 653 KLYTKVGYLDEAEAIYRKL 671
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 114/241 (47%), Gaps = 8/241 (3%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+++G+KP TY +L+D Y A M+++G+ PD ++ I++ K +
Sbjct: 213 MIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKARE 272
Query: 65 VNEALNLLKQMHSEK------IIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPAD 118
+A K+ ++ + ++ TYN++ID K+G++ A E M G
Sbjct: 273 FQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPT 332
Query: 119 IITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 178
+T+N+ + + + +L+K + PD TYNIL+ K I+ A F+
Sbjct: 333 TVTFNTMIHIYGNNGQLGEVTSLMK-TMKLHCAPDTRTYNILISLHTKNNDIERAGAYFK 391
Query: 179 DLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
++ G + +Y T++ + +EA L+++M+D+ D T ++ ++ ++ +
Sbjct: 392 EMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYT-QSALTRMYVEA 450
Query: 239 E 239
E
Sbjct: 451 E 451
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 86/185 (46%), Gaps = 4/185 (2%)
Query: 2 LAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQM---GVFPDVLSYSIMING 58
+ M + G+ N V YNSL+ Y V +++A+A++ + Q +PDV + + MIN
Sbjct: 633 VEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINL 692
Query: 59 LCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPAD 118
+ MV +A + M ++ N T+ ++ K G+ A ++ +M D
Sbjct: 693 YSERSMVRKAEAIFDSM-KQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTD 751
Query: 119 IITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 178
++YNS L + + K+++ GIQPD T+ L L K G K A +
Sbjct: 752 PLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIE 811
Query: 179 DLFKK 183
++ KK
Sbjct: 812 EIRKK 816
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 2/193 (1%)
Query: 16 TYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQM 75
TYN+++D Y ++ +A F M + G+ P ++++ MI+ + E +L+K M
Sbjct: 300 TYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM 359
Query: 76 HSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHV 135
P+T TYN LI K + A EM G D ++Y + L A H V
Sbjct: 360 KLH-CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMV 418
Query: 136 DKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTM 195
++ LI ++ D ++ D T + L + ++ + F+ G N+++ Y+
Sbjct: 419 EEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAG-NMSSEGYSAN 477
Query: 196 INGLCKEGLFDEA 208
I+ + G EA
Sbjct: 478 IDAYGERGYLSEA 490
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 92/211 (43%), Gaps = 14/211 (6%)
Query: 32 KAQAVFNTMTQMGVFP-DVLSYSIMINGL---CKMKMVNEALNLLKQMHSEKIIPNTITY 87
+A +F G + +V+ Y+IM+ L CK + V +L +M + I P TY
Sbjct: 169 RAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQ---SLWDEMIRKGIKPINSTY 225
Query: 88 NSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKV-- 145
+LID K G +A L +M G D +T L K K KK
Sbjct: 226 GTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSC 285
Query: 146 ----IDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCK 201
D + TYN ++D K G+IK+A E F+ + ++G T+NTMI+
Sbjct: 286 DENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGN 345
Query: 202 EGLFDEALTLMSKMEDNGCIHDPITFETIIS 232
G E +LM M+ + C D T+ +IS
Sbjct: 346 NGQLGEVTSLMKTMKLH-CAPDTRTYNILIS 375
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 1/157 (0%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNL 71
P+V T N +++ Y + V KA+A+F++M Q G + ++++M+ K EA +
Sbjct: 681 PDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGE-ANEFTFAMMLCMYKKNGRFEEATQI 739
Query: 72 LKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 131
KQM KI+ + ++YNS++ G+ A E EM G D T+ S L K
Sbjct: 740 AKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMK 799
Query: 132 GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCG 168
K + I+++ K I+ + + L L G
Sbjct: 800 LGMSKKAVRKIEEIRKKEIKRGLELWISTLSSLVGIG 836
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 107/206 (51%)
Query: 7 KQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVN 66
K G+ P++VTYN+++ C ++ ++F + + G PD++S++ ++ + ++
Sbjct: 186 KLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFV 245
Query: 67 EALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 126
E + M S+ + PN +YNS + GL + K ++A L+D M G D+ TYN+ +
Sbjct: 246 EGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALI 305
Query: 127 DALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 186
A +++++ + ++ +KG+ PD TY +L+ LCK G + A EV ++ K
Sbjct: 306 TAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLL 365
Query: 187 LNNWTYNTMINGLCKEGLFDEALTLM 212
Y ++ L G DEA L+
Sbjct: 366 SRPNMYKPVVERLMGAGKIDEATQLV 391
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 117/231 (50%), Gaps = 1/231 (0%)
Query: 14 VVTYNSLMDGYCLVNEVNKAQAVFNTMTQ-MGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
V ++N+L+ Y ++++A F + + +G+ PD+++Y+ MI LC+ +++ L++
Sbjct: 157 VKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIF 216
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 132
+++ P+ I++N+L++ + + D M + +I +YNS + L +
Sbjct: 217 EELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRN 276
Query: 133 HHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 192
+ LI + +GI PD+ TYN L+ +++ + + ++ +KG + TY
Sbjct: 277 KKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTY 336
Query: 193 NTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+I LCK+G D A+ + + + + P ++ ++ L G+ D+A
Sbjct: 337 CMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEA 387
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 93/177 (52%), Gaps = 4/177 (2%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
+ K G +P+++++N+L++ + + +++ M + P++ SY+ + GL + K
Sbjct: 219 LEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKK 278
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ALNL+ M +E I P+ TYN+LI + + +EM +G D +TY
Sbjct: 279 FTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCM 338
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGI--QPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
+ LCK +D+ + + ++ I + +P+M Y +++ L G+I +A ++ ++
Sbjct: 339 LIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNM--YKPVVERLMGAGKIDEATQLVKN 393
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 60/107 (56%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
++ VM +G+ P+V TYN+L+ Y + N + + +N M + G+ PD ++Y ++I LC
Sbjct: 285 LIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLC 344
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELL 107
K ++ A+ + ++ K++ Y +++ L GK+ A +L+
Sbjct: 345 KKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLV 391
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 64/140 (45%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
+M + + PN+ +YNS + G + A + + M G+ PDV +Y+ +I
Sbjct: 253 LMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDN 312
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
+ E + +M + + P+T+TY LI LCK G + A E+ +E + Y
Sbjct: 313 NLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYK 372
Query: 124 SFLDALCKGHHVDKGIALIK 143
++ L +D+ L+K
Sbjct: 373 PVVERLMGAGKIDEATQLVK 392
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 118/241 (48%), Gaps = 6/241 (2%)
Query: 3 AVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLS-----YSIMIN 57
AV V+ + + YN +++ + ++A +F+ + + P L+ +++M+N
Sbjct: 299 AVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVN 358
Query: 58 GLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPA 117
G C EA+ + +QM K P+T+++N+L++ LC ++ A +L EM +
Sbjct: 359 GYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKP 418
Query: 118 DIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVF 177
D TY +D K +D+G A K +++ ++P++ YN L D L K G++ DA+ F
Sbjct: 419 DEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFF 478
Query: 178 QDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK 237
D+ +++ Y ++ L + G DE L ++ +M D+ + + + K
Sbjct: 479 -DMMVSKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQEFVKEELRK 537
Query: 238 G 238
G
Sbjct: 538 G 538
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 108/239 (45%), Gaps = 12/239 (5%)
Query: 7 KQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVF-PDVLSYSIMINGLCKMKMV 65
+ G+ PN++TYN + Y V + A + P + ++ I++ GL +
Sbjct: 158 QAGIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNL 217
Query: 66 NEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVR--GQPADIITYN 123
+A+ + + M + + + + Y+ L+ G K +L E+ + G D + Y
Sbjct: 218 EKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYG 277
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMC--TYNILLDGLCKCGRIKDAQEVFQDLF 181
+ + + ++ + + + M YN +L+ L + G+ +A ++F D
Sbjct: 278 QLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLF-DAV 336
Query: 182 KKGYN------LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
KK +N +N T+N M+NG C G F+EA+ + +M D C D ++F +++ L
Sbjct: 337 KKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQL 395
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 113/243 (46%), Gaps = 15/243 (6%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNL 71
P++ T+ L+ G + + KA + M G D + YS ++ G K + L L
Sbjct: 199 PSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKL 258
Query: 72 LKQMHSEKI---IPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADI----ITYNS 124
+++ EK+ + + + Y L+ G A E +E G+ + + + YN
Sbjct: 259 YQEL-KEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEE--AVGENSKVRMSAMAYNY 315
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQP-----DMCTYNILLDGLCKCGRIKDAQEVFQD 179
L+AL + D+ + L V + P ++ T+N++++G C G+ ++A EVF+
Sbjct: 316 VLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQ 375
Query: 180 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
+ + + ++N ++N LC L EA L +ME+ D T+ ++ F++G+
Sbjct: 376 MGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGK 435
Query: 240 NDK 242
D+
Sbjct: 436 IDE 438
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 114/251 (45%), Gaps = 15/251 (5%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQM-----GVFPDVLSYSIMINGL 59
M +G + V Y+ LM G C+ N + A V ++ G D + Y ++ G
Sbjct: 227 MAVKGFVVDPVVYSYLMMG-CVKN--SDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGY 283
Query: 60 CKMKMVNEALNLLKQMHSE--KIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPA 117
+M EA+ ++ E K+ + + YN +++ L + GK A +L D + P
Sbjct: 284 FMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPP 343
Query: 118 -----DIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKD 172
++ T+N ++ C G ++ + + +++ D PD ++N L++ LC + +
Sbjct: 344 RHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAE 403
Query: 173 AQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIIS 232
A++++ ++ +K + +TY +++ KEG DE M ++ + + +
Sbjct: 404 AEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQD 463
Query: 233 ALFEKGENDKA 243
L + G+ D A
Sbjct: 464 QLIKAGKLDDA 474
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 70/159 (44%), Gaps = 3/159 (1%)
Query: 82 PNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIAL 141
P T N+++ + K +L ++ G +IITYN A + +
Sbjct: 128 PTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEH 187
Query: 142 IKKVIDKG-IQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLC 200
K ID + P + T+ IL+ GL ++ A E+ +D+ KG+ ++ Y+ ++ G
Sbjct: 188 YKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCV 247
Query: 201 KEGLFDEALTLMSKMEDN--GCIHDPITFETIISALFEK 237
K D L L ++++ G + D + + ++ F K
Sbjct: 248 KNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMK 286
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 126/242 (52%)
Query: 2 LAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCK 61
L M + V ++V Y++L++ + + +KA ++F+ + + G+ PD+++Y+ MIN K
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 272
Query: 62 MKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 121
K+ EA L+K+M+ ++PNT++Y++L+ + K A + EM D+ T
Sbjct: 273 AKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTT 332
Query: 122 YNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF 181
N +D + V + L + I+P++ +YN +L + +A +F+ +
Sbjct: 333 CNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQ 392
Query: 182 KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
+K N TYNTMI K ++A L+ +M+ G + IT+ TIIS + G+ D
Sbjct: 393 RKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLD 452
Query: 242 KA 243
+A
Sbjct: 453 RA 454
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 120/239 (50%), Gaps = 4/239 (1%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M + GV PN V+Y++L+ Y ++ +A +VF M ++ D+ + +IMI+ ++ M
Sbjct: 286 MNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDM 345
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V EA L + I PN ++YN+++ + A L M + +++TYN+
Sbjct: 346 VKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNT 405
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ K +K L++++ +GI+P+ TY+ ++ K G++ A +FQ L G
Sbjct: 406 MIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSG 465
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
++ Y TMI + GL A L+ +++ + D I ET I+ L + G ++A
Sbjct: 466 VEIDQVLYQTMIVAYERVGLMGHAKRLLHELK----LPDNIPRETAITILAKAGRTEEA 520
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 118/263 (44%), Gaps = 31/263 (11%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
++ T N ++D Y ++ V +A +F ++ +M + P+V+SY+ ++ + ++ EA++L
Sbjct: 329 DLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLF 388
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 132
+ M + I N +TYN++I KT + A L+ EM RG + ITY++ + K
Sbjct: 389 RLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKA 448
Query: 133 HHVDKGIALIKKVIDKGIQPDMCTYNILLDG----------------------------- 163
+D+ L +K+ G++ D Y ++
Sbjct: 449 GKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAI 508
Query: 164 --LCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCI 221
L K GR ++A VF+ F+ G + + MIN + + + + KM G
Sbjct: 509 TILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYF 568
Query: 222 HDPITFETIISALFEKGENDKAE 244
D +++A ++ E +KA+
Sbjct: 569 PDSNVIAMVLNAYGKQREFEKAD 591
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 124/280 (44%), Gaps = 43/280 (15%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
+ K ++PNVV+YN+++ Y +A +F M + + +V++Y+ MI K
Sbjct: 356 LRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTME 415
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+A NL+++M S I PN ITY+++I K GK+ A L ++ G D + Y +
Sbjct: 416 HEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQT 475
Query: 125 FLDA-------------------------------LCKGHHVDKGIALIKKVIDKGIQPD 153
+ A L K ++ + ++ + G D
Sbjct: 476 MIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKD 535
Query: 154 MCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMS 213
+ + +++ + R + EVF+ + GY ++ ++N K+ F++A T+
Sbjct: 536 ISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYR 595
Query: 214 KMEDNGCIH-DPITFETI-----------ISALFEKGEND 241
+M++ GC+ D + F+ + + +LF++ E+D
Sbjct: 596 EMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESD 635
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 115/267 (43%), Gaps = 35/267 (13%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNL 71
P+V YN ++ + + A +F+ M Q + PD +YS +I K M + AL+
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 72 LKQMHSEK-----------------------------------IIPNTITYNSLIDGLCK 96
L++M ++ I P+ + YNS+I+ K
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 272
Query: 97 TGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCT 156
A L+ EM+ G + ++Y++ L + H + +++ ++ + D+ T
Sbjct: 273 AKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTT 332
Query: 157 YNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKME 216
NI++D + +K+A +F L K N +YNT++ + LF EA+ L M+
Sbjct: 333 CNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQ 392
Query: 217 DNGCIHDPITFETIISALFEKGENDKA 243
+ +T+ T+I + E++KA
Sbjct: 393 RKDIEQNVVTYNTMIKIYGKTMEHEKA 419
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 88/188 (46%), Gaps = 1/188 (0%)
Query: 50 LSYSIMINGLCKMKMVNEALNLLKQMHSE-KIIPNTITYNSLIDGLCKTGKVSNAWELLD 108
LS M++ L + +L LL +H E K P+ YN ++ + + + A L D
Sbjct: 120 LSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFD 179
Query: 109 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCG 168
EM R D TY++ + + K D ++ ++K+ + D+ Y+ L++ +
Sbjct: 180 EMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLC 239
Query: 169 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFE 228
A +F L + G + YN+MIN K LF EA L+ +M + G + + +++
Sbjct: 240 DYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYS 299
Query: 229 TIISALFE 236
T++S E
Sbjct: 300 TLLSVYVE 307
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 99.4 bits (246), Expect = 2e-21, Method: Composition-based stats.
Identities = 61/235 (25%), Positives = 114/235 (48%), Gaps = 1/235 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M QG P+ TYNSL V+ V++AQ + M G P +Y+ MI ++ +
Sbjct: 541 MKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGL 600
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+++A++L + M + PN + Y SLI+G ++G V A + M G ++ I S
Sbjct: 601 LSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTS 660
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ A K +++ + K+ D PD+ N +L G + +A+ +F L +KG
Sbjct: 661 LIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKG 720
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
+ ++ TM+ G+ DEA+ + +M ++G + D +F +++ G+
Sbjct: 721 -TCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQ 774
Score = 81.3 bits (199), Expect = 5e-16, Method: Composition-based stats.
Identities = 47/155 (30%), Positives = 82/155 (52%)
Query: 84 TITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIK 143
T T+N+LID K G++++A L EM G P D +T+N+ + H+ + +L+K
Sbjct: 305 TSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLK 364
Query: 144 KVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEG 203
K+ +KGI PD TYNILL G I+ A E ++ + K G + T+ +++ LC+
Sbjct: 365 KMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRK 424
Query: 204 LFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
+ E ++++M+ N D + I+ +G
Sbjct: 425 MVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEG 459
Score = 79.7 bits (195), Expect = 2e-15, Method: Composition-based stats.
Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 1/188 (0%)
Query: 32 KAQAVFNTMTQM-GVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSL 90
+A+ VF M G DVL Y++MI K K+ +AL+L K M ++ P+ TYNSL
Sbjct: 497 EAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSL 556
Query: 91 IDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGI 150
L V A +L EM G TY + + + + + + L + + G+
Sbjct: 557 FQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGV 616
Query: 151 QPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALT 210
+P+ Y L++G + G +++A + F+ + + G N+ ++I K G +EA
Sbjct: 617 KPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARR 676
Query: 211 LMSKMEDN 218
+ KM+D+
Sbjct: 677 VYDKMKDS 684
Score = 79.3 bits (194), Expect = 2e-15, Method: Composition-based stats.
Identities = 52/224 (23%), Positives = 108/224 (48%), Gaps = 3/224 (1%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G + +V+ YN ++ Y KA ++F M G +PD +Y+ + L + +V+EA
Sbjct: 510 GQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEA 569
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
+L +M P TY ++I + G +S+A +L + M G + + Y S ++
Sbjct: 570 QRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLING 629
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
+ V++ I + + + G+Q + L+ K G +++A+ V+ + +
Sbjct: 630 FAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPD 689
Query: 189 NWTYNTMINGLCKE-GLFDEALTLMSKMEDNGCIHDPITFETII 231
N+M++ LC + G+ EA ++ + + + G D I+F T++
Sbjct: 690 VAASNSMLS-LCADLGIVSEAESIFNALREKGTC-DVISFATMM 731
Score = 78.6 bits (192), Expect = 3e-15, Method: Composition-based stats.
Identities = 61/257 (23%), Positives = 111/257 (43%), Gaps = 22/257 (8%)
Query: 8 QGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNE 67
Q PNV+ YN ++ + ++ + + M GV P +Y ++++ K +V E
Sbjct: 139 QSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKE 198
Query: 68 ALNLLKQMHSEKIIPNTITYNSLI----------------DGLCKTGKVSNAWELLDEMH 111
AL +K M P+ +T +++ G C GKV + +D+
Sbjct: 199 ALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWC-AGKVDLDLDSIDDFP 257
Query: 112 VRGQPADIITYNSFLD----ALCKGHHVDKGIALIKKVIDKGIQPDMC-TYNILLDGLCK 166
G + FL + + ++K + +P + T+N L+D K
Sbjct: 258 KNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGK 317
Query: 167 CGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPIT 226
GR+ DA +F ++ K G ++ T+NTMI+ G EA +L+ KME+ G D T
Sbjct: 318 AGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKT 377
Query: 227 FETIISALFEKGENDKA 243
+ ++S + G+ + A
Sbjct: 378 YNILLSLHADAGDIEAA 394
Score = 75.5 bits (184), Expect = 3e-14, Method: Composition-based stats.
Identities = 62/235 (26%), Positives = 119/235 (50%), Gaps = 3/235 (1%)
Query: 11 KPNVV-TYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEAL 69
KP + T+N+L+D Y +N A +F+ M + GV D ++++ MI+ ++EA
Sbjct: 301 KPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAE 360
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
+LLK+M + I P+T TYN L+ G + A E ++ G D +T+ + L L
Sbjct: 361 SLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHIL 420
Query: 130 CKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 189
C+ V + A+I ++ I+ D + +++ G + A+ +F+ F+ L++
Sbjct: 421 CQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFER-FQLDCVLSS 479
Query: 190 WTYNTMINGLCKEGLFDEALTLM-SKMEDNGCIHDPITFETIISALFEKGENDKA 243
T +I+ ++GL+ EA T+ K +G +D + + +I A + ++KA
Sbjct: 480 TTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKA 534
Score = 66.2 bits (160), Expect = 2e-11, Method: Composition-based stats.
Identities = 55/273 (20%), Positives = 120/273 (43%), Gaps = 35/273 (12%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ + M+K GV + VT+N+++ +++A+++ M + G+ PD +Y+I+++
Sbjct: 327 LFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHA 386
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMH--------- 111
+ AL +++ + P+T+T+ +++ LC+ V+ ++ EM
Sbjct: 387 DAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEH 446
Query: 112 ---------------VRGQP------ADIITYNSFLDALC-----KGHHVDKGIALIKKV 145
V+ + D + ++ L A+ KG V+ K
Sbjct: 447 SVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKR 506
Query: 146 IDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLF 205
G + D+ YN+++ K + A +F+ + +G + TYN++ L L
Sbjct: 507 NMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLV 566
Query: 206 DEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
DEA ++++M D+GC T+ +I++ G
Sbjct: 567 DEAQRILAEMLDSGCKPGCKTYAAMIASYVRLG 599
Score = 58.5 bits (140), Expect = 3e-09, Method: Composition-based stats.
Identities = 51/216 (23%), Positives = 100/216 (46%), Gaps = 4/216 (1%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNL 71
P+V NS++ + V++A+++FN + + G DV+S++ M+ M M++EA+ +
Sbjct: 688 PDVAASNSMLSLCADLGIVSEAESIFNALREKGTC-DVISFATMMYLYKGMGMLDEAIEV 746
Query: 72 LKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHV-RGQPADIITYNSFLDALC 130
++M ++ + ++N ++ G++S EL EM V R D T+ + L
Sbjct: 747 AEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLK 806
Query: 131 KGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 190
KG + ++ ++ ++ +P + T I G A E Q+L ++
Sbjct: 807 KGGVPSEAVSQLQTAYNEA-KP-LATPAITATLFSAMGLYAYALESCQELTSGEIPREHF 864
Query: 191 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPIT 226
YN +I G D AL +M++ G D +T
Sbjct: 865 AYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVT 900
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 110/236 (46%), Gaps = 1/236 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLV-NEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
M + G+KP+VVTYN+L+ G V N KA + + G+ D + Y ++
Sbjct: 192 MKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNG 251
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
EA N ++QM E PN Y+SL++ G A EL+ EM G + +
Sbjct: 252 RSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMT 311
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ L KG D+ L+ ++ G + Y +L+DGL K G++++A+ +F D+ K
Sbjct: 312 TLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGK 371
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
G + + + MI+ LC+ F EA L E D + T++ A GE
Sbjct: 372 GVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGE 427
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 103/210 (49%), Gaps = 3/210 (1%)
Query: 36 VFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLC 95
+F M Q G V +YS I K V++AL + + + E N NS++ L
Sbjct: 120 LFEWMQQHGKI-SVSTYSSCIK-FVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLV 177
Query: 96 KTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK-GHHVDKGIALIKKVIDKGIQPDM 154
K GK+ + +L D+M G D++TYN+ L K + K I LI ++ GIQ D
Sbjct: 178 KNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDS 237
Query: 155 CTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSK 214
Y +L GR ++A+ Q + +G++ N + Y++++N +G + +A LM++
Sbjct: 238 VMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTE 297
Query: 215 MEDNGCIHDPITFETIISALFEKGENDKAE 244
M+ G + + + T++ + G D++
Sbjct: 298 MKSIGLVPNKVMMTTLLKVYIKGGLFDRSR 327
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 112/240 (46%), Gaps = 2/240 (0%)
Query: 6 MKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMV 65
M+Q K +V TY+S + + V+KA ++ ++ +V + +++ L K +
Sbjct: 124 MQQHGKISVSTYSSCIK-FVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKL 182
Query: 66 NEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGK-VSNAWELLDEMHVRGQPADIITYNS 124
+ + L QM + + P+ +TYN+L+ G K A EL+ E+ G D + Y +
Sbjct: 183 DSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGT 242
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
L ++ I+++ +G P++ Y+ LL+ G K A E+ ++ G
Sbjct: 243 VLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIG 302
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
N T++ K GLFD + L+S++E G + + + ++ L + G+ ++A
Sbjct: 303 LVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEAR 362
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 35/211 (16%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L+ + G N + Y LMDG ++ +A+++F+ M GV D + SIMI+ LC
Sbjct: 329 LLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALC 388
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ K EA L + + TY + D++
Sbjct: 389 RSKRFKEAKELSRD--------SETTY---------------------------EKCDLV 413
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
N+ L A C+ ++ + ++KK+ ++ + PD T++IL+ K A + D+
Sbjct: 414 MLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDM 473
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTL 211
KG+ L +++I L K EA ++
Sbjct: 474 HSKGHRLEEELCSSLIYHLGKIRAQAEAFSV 504
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 102/231 (44%), Gaps = 9/231 (3%)
Query: 18 NSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHS 77
NS + ++EV ++ +++ ++ V ++++ + + L + M
Sbjct: 67 NSYLARKSAISEVQRSSDFLSSLQRLATVLKVQDLNVILRDFGISGRWQDLIQLFEWMQQ 126
Query: 78 EKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDK 137
I + TY+S I VS A E+ + ++ NS L L K +D
Sbjct: 127 HGKI-SVSTYSSCIK-FVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDS 184
Query: 138 GIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKD----AQEVFQDLFKKGYNLNNWTYN 193
I L ++ G++PD+ TYN LL G C ++K+ A E+ +L G +++ Y
Sbjct: 185 CIKLFDQMKRDGLKPDVVTYNTLLAG---CIKVKNGYPKAIELIGELPHNGIQMDSVMYG 241
Query: 194 TMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
T++ G +EA + +M+ G + + +++++ KG+ KA+
Sbjct: 242 TVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKAD 292
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 131/311 (42%), Gaps = 67/311 (21%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
++ +M+ G+ +V ++ L+ G+ E KA +FN M Q+G P++++Y+ +I G
Sbjct: 234 VVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFV 293
Query: 61 KMKMVNEALNLLKQMHSE-----------------------------------KIIPNTI 85
+ MV+EA +L ++ SE K++P+
Sbjct: 294 DLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQY 353
Query: 86 TYNSLIDGLCKTGKV--------------------------------SNAWELLDEMHVR 113
T+ S++ LC +GK S A ++L M +
Sbjct: 354 TFASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYK 413
Query: 114 GQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDA 173
D TY +L ALC+G I + K +I + D ++ ++D L + G+ A
Sbjct: 414 DFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTA 473
Query: 174 QEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
+F+ + Y L+ +Y I GL + +EA +L M++ G + T+ TIIS
Sbjct: 474 VHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISG 533
Query: 234 LFEKGENDKAE 244
L ++ E +K
Sbjct: 534 LCKEKETEKVR 544
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 129/307 (42%), Gaps = 68/307 (22%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ G PN+VTY SL+ G+ + V++A V + + G+ PD++ ++MI+ ++
Sbjct: 273 MIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGR 332
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKV------------------------ 100
EA + + K++P+ T+ S++ LC +GK
Sbjct: 333 FEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSN 392
Query: 101 --------SNAWELLDEMHVRGQPADIITYNSFLDALCKG-----------------HHV 135
S A ++L M + D TY +L ALC+G H+
Sbjct: 393 CFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHL 452
Query: 136 DK------------------GIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVF 177
D + L K+ I + D+ +Y + + GL + RI++A +
Sbjct: 453 DAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLC 512
Query: 178 QDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK 237
D+ + G N TY T+I+GLCKE ++ ++ + G DP T + + +L +
Sbjct: 513 CDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELDPNT-KFQVYSLLSR 571
Query: 238 GENDKAE 244
D +E
Sbjct: 572 YRGDFSE 578
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 106/240 (44%), Gaps = 7/240 (2%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M G PN N +MD +N VN A +F + F + S+ I ++ C
Sbjct: 134 MSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIR----FRNFFSFDIALSHFCSRGG 189
Query: 65 VNEALNL---LKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 121
+ + + LK+M E PN + ++ C+TG VS A++++ M G +
Sbjct: 190 RGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNV 249
Query: 122 YNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF 181
++ + + K + L K+I G P++ TY L+ G G + +A V +
Sbjct: 250 WSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQ 309
Query: 182 KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
+G + N MI+ + G F+EA + + +E + D TF +I+S+L G+ D
Sbjct: 310 SEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFD 369
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 102/243 (41%), Gaps = 3/243 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M+ +G PN + ++ C V++A V M G+ V +S++++G
Sbjct: 199 VLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFF 258
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ +A++L +M PN +TY SLI G G V A+ +L ++ G DI+
Sbjct: 259 RSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIV 318
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
N + + ++ + + + + PD T+ +L LC G+ + +
Sbjct: 319 LCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI 378
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
G + + T N + N K G AL ++S M D T+ +SAL G
Sbjct: 379 ---GTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAP 435
Query: 241 DKA 243
A
Sbjct: 436 RAA 438
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 70/153 (45%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L++M + + TY + C A ++ + + D +S +I+ L
Sbjct: 406 VLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLI 465
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++ N A++L K+ EK + ++Y I GL + ++ A+ L +M G +
Sbjct: 466 ELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRR 525
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPD 153
TY + + LCK +K ++++ I +G++ D
Sbjct: 526 TYRTIISGLCKEKETEKVRKILRECIQEGVELD 558
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 98.2 bits (243), Expect = 4e-21, Method: Composition-based stats.
Identities = 63/233 (27%), Positives = 105/233 (45%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNL 71
P S++D Y + A +F + G P ++ SI++N L EA ++
Sbjct: 702 PGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHI 761
Query: 72 LKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 131
+ + I +T+ YN+LI + + GK+ A E+ + MH G P I TYN+ + +
Sbjct: 762 SRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGR 821
Query: 132 GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT 191
G +DK I + G+ D Y ++ K G++ +A +F ++ KKG +
Sbjct: 822 GLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPS 881
Query: 192 YNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
YN M+ L E L+ ME NG D T+ T+I E + +AE
Sbjct: 882 YNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAE 934
Score = 71.2 bits (173), Expect = 7e-13, Method: Composition-based stats.
Identities = 55/225 (24%), Positives = 106/225 (47%), Gaps = 8/225 (3%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALN 70
+P+VV Y ++ Y V ++ A+ F M ++G PD ++ M+ + + L
Sbjct: 185 RPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLT 244
Query: 71 LLKQMHSEKIIPNTITYNSLIDGLCKT---GKVSNAW-ELLDEMHVRGQPADIITYNSFL 126
K + +I+ +T YN ++ L K GKV + W E+++E G P + TY +
Sbjct: 245 FYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEE----GVPPNEFTYTLVV 300
Query: 127 DALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 186
+ K ++ + ++ G P+ TY+ ++ K G + A +++D+ +G
Sbjct: 301 SSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIV 360
Query: 187 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 231
+N+T TM++ K + +AL+L + ME N D + II
Sbjct: 361 PSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLII 405
Score = 68.9 bits (167), Expect = 3e-12, Method: Composition-based stats.
Identities = 53/212 (25%), Positives = 103/212 (48%), Gaps = 2/212 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M GV ++ TYN+++ Y +++KA +F+ + G++ D Y+ MI K
Sbjct: 800 MHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGK 859
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAW-ELLDEMHVRGQPADIITYN 123
++EAL+L +M + I P T +YN ++ +C T ++ + ELL M G+ D+ TY
Sbjct: 860 MSEALSLFSEMQKKGIKPGTPSYNMMVK-ICATSRLHHEVDELLQAMERNGRCTDLSTYL 918
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ + + + I V +KGI ++ LL L K G +++A+ + + +
Sbjct: 919 TLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEA 978
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKM 215
G + ++ T++ G G ++ + KM
Sbjct: 979 GISPDSACKRTILKGYMTCGDAEKGILFYEKM 1010
Score = 60.1 bits (144), Expect = 1e-09, Method: Composition-based stats.
Identities = 52/244 (21%), Positives = 113/244 (46%), Gaps = 5/244 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L +M K + + V N ++ + +V+KA+ + + + ++G+ + + + +I
Sbjct: 624 ILNLMFKTDLGSSAV--NRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYG 681
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + EA L K P S+ID + G + +A+ L E +G +
Sbjct: 682 RQHKLKEAKRLYLAAGESKT-PGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAV 740
Query: 121 TYNSFLDALC-KGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
T + ++AL +G H + + + ++K I+ D YN L+ + + G+++ A E+++
Sbjct: 741 TISILVNALTNRGKHREAE-HISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYER 799
Query: 180 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
+ G + TYNTMI+ + D+A+ + S +G D + +I + G+
Sbjct: 800 MHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGK 859
Query: 240 NDKA 243
+A
Sbjct: 860 MSEA 863
Score = 58.9 bits (141), Expect = 3e-09, Method: Composition-based stats.
Identities = 53/241 (21%), Positives = 111/241 (46%), Gaps = 6/241 (2%)
Query: 6 MKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMV 65
+++ ++ + V YN+L+ ++ A ++ M GV + +Y+ MI+ + +
Sbjct: 766 LEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQL 825
Query: 66 NEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 125
++A+ + + + Y ++I K GK+S A L EM +G +YN
Sbjct: 826 DKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMM 885
Query: 126 LD--ALCKGHH-VDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 182
+ A + HH VD+ L++ + G D+ TY L+ + + +A++ + +
Sbjct: 886 VKICATSRLHHEVDE---LLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKE 942
Query: 183 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 242
KG L++ ++++++ L K G+ +EA KM + G D TI+ G+ +K
Sbjct: 943 KGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEK 1002
Query: 243 A 243
Sbjct: 1003 G 1003
Score = 57.0 bits (136), Expect = 1e-08, Method: Composition-based stats.
Identities = 49/240 (20%), Positives = 103/240 (42%), Gaps = 1/240 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M QG+ P+ T +++ Y KA ++F M + + D + ++I K+ +
Sbjct: 354 MRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGL 413
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++A ++ ++ ++ + TY ++ +G V A ++++ M R P Y
Sbjct: 414 FHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIV 473
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
L K +VD + + G+ PD + N +L+ + + A+ + +
Sbjct: 474 MLQCYAKIQNVDCAEEAFRALSKTGL-PDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQ 532
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ + Y T + CKEG+ EA L+ KM + D +T+ ++ ++DK E
Sbjct: 533 VHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHE 592
Score = 53.5 bits (127), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/177 (23%), Positives = 75/177 (42%)
Query: 40 MTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGK 99
M + GV P+ +Y+++++ K EAL +M S +P +TY+S+I K G
Sbjct: 284 MVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGD 343
Query: 100 VSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNI 159
A L ++M +G T + L K + K ++L + I D +
Sbjct: 344 WEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGL 403
Query: 160 LLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKME 216
++ K G DAQ +F++ + + TY M G +AL ++ M+
Sbjct: 404 IIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMK 460
Score = 51.6 bits (122), Expect = 4e-07, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 73/162 (45%)
Query: 82 PNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIAL 141
P+ + Y ++ + GK+ A E EM G D + + L + +
Sbjct: 186 PSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTF 245
Query: 142 IKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCK 201
K V ++ I YN +L L K +++ ++ ++G N +TY +++ K
Sbjct: 246 YKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAK 305
Query: 202 EGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+G +EAL +M+ G + + +T+ ++IS + G+ +KA
Sbjct: 306 QGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKA 347
Score = 49.3 bits (116), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/207 (20%), Positives = 96/207 (46%), Gaps = 16/207 (7%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
++ +M + + + Y ++ Y + V+ A+ F +++ G+ PD S + M+N
Sbjct: 455 VIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL-PDASSCNDMLNLYT 513
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++ + +A +KQ+ +++ + Y + + CK G V+ A +L+ +M + D
Sbjct: 514 RLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKD-- 571
Query: 121 TYNSFLDALCKGHHV----DKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 176
N F+ L + H+ DK A++ Q D+ ++L+ K G + + + +
Sbjct: 572 --NRFVQTLAESMHIVNKHDKHEAVLNVS-----QLDVMALGLMLNLRLKEGNLNETKAI 624
Query: 177 FQDLFKKGYNLNNWTYNTMINGLCKEG 203
+FK +L + N +I+ +EG
Sbjct: 625 LNLMFKT--DLGSSAVNRVISSFVREG 649
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 133/309 (43%), Gaps = 66/309 (21%)
Query: 1 MLAVMMKQG---VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYS---- 53
+L +M+++G V PN+ T+N L+ +C +V +A V M + GV PD ++Y+
Sbjct: 172 LLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIAT 231
Query: 54 ---------------------------------IMINGLCKMKMVNEALNLLKQMHSEKI 80
I++ G C+ V + L +++M ++
Sbjct: 232 CYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRV 291
Query: 81 IPNTITYNSLIDGLCKT-------------------------GKVSNAWELLDEMHVRGQ 115
N + +NSLI+G + G ++L M
Sbjct: 292 EANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNV 351
Query: 116 PADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQE 175
AD+ITY++ ++A +++K + K+++ G++PD Y+IL G + K A+E
Sbjct: 352 KADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEE 411
Query: 176 VFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALF 235
+ + L + N + T+I+G C G D+A+ + +KM G + TFET++
Sbjct: 412 LLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYL 470
Query: 236 EKGENDKAE 244
E + KAE
Sbjct: 471 EVKQPWKAE 479
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 119/246 (48%), Gaps = 5/246 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ + + G +P++++Y +L+ + + ++ + + Q G D + ++ +IN
Sbjct: 67 VFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFS 126
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQ---PA 117
+ + +A+ L +M + P T TYN+LI G GK + ELLD M G
Sbjct: 127 ESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGP 186
Query: 118 DIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGR-IKDAQEV 176
+I T+N + A CK V++ ++KK+ + G++PD TYN + + G ++ EV
Sbjct: 187 NIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEV 246
Query: 177 FQDL-FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALF 235
+ + K+ N T ++ G C+EG + L + +M++ + + F ++I+
Sbjct: 247 VEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFV 306
Query: 236 EKGEND 241
E + D
Sbjct: 307 EVMDRD 312
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 99/199 (49%), Gaps = 3/199 (1%)
Query: 49 VLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLD 108
V S + ++N L + +EA + K + P+ I+Y +L+ + + + ++
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 109 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCG 168
E+ G D I +N+ ++A + +++ + + K+ + G+ P TYN L+ G G
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 169 RIKDAQEVFQDLFKKG---YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPI 225
+ + + E+ + ++G N T+N ++ CK+ +EA ++ KME+ G D +
Sbjct: 165 KPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTV 224
Query: 226 TFETIISALFEKGENDKAE 244
T+ TI + +KGE +AE
Sbjct: 225 TYNTIATCYVQKGETVRAE 243
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 84/163 (51%), Gaps = 1/163 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L +M + VK +V+TY+++M+ + + KA VF M + GV PD +YSI+ G
Sbjct: 342 VLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYV 401
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ K +A LL+ + E PN + + ++I G C G + +A + ++M G +I
Sbjct: 402 RAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIK 460
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDG 163
T+ + + + K +++ + G++P+ T+ +L +
Sbjct: 461 TFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEA 503
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 99/230 (43%), Gaps = 28/230 (12%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLV--------------------------NEVNKAQAVFN 38
M + V+ N+V +NSL++G+ V N+ K Q V
Sbjct: 286 MKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQ-VLT 344
Query: 39 TMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTG 98
M + V DV++YS ++N + +A + K+M + P+ Y+ L G +
Sbjct: 345 LMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAK 404
Query: 99 KVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYN 158
+ A ELL+ + V +P +++ + + + C +D + + K+ G+ P++ T+
Sbjct: 405 EPKKAEELLETLIVESRP-NVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFE 463
Query: 159 ILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 208
L+ G + + A+EV Q + G N T+ + GL DE+
Sbjct: 464 TLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDES 513
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 110/215 (51%), Gaps = 3/215 (1%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M +GV ++ +Y+ MD C + KA ++ M + DV++Y+ +I + +
Sbjct: 215 MDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQG 274
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V + + ++M PN T+N++I LC+ G++ +A+ +LDEM RG D ITY
Sbjct: 275 VEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMC 334
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
L K + ++L ++I G++P M TY +L+ + G ++ V++ + + G
Sbjct: 335 LFSRLEKPSEI---LSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESG 391
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 219
++ YN +I+ L ++G+ D A +M + G
Sbjct: 392 DTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERG 426
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 105/232 (45%), Gaps = 3/232 (1%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
N +N ++ G+ + K + + M GV D+ SYSI ++ +CK +A+ L
Sbjct: 188 NTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLY 247
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 132
K+M S ++ + + YN++I + + V + EM RG ++ T+N+ + LC+
Sbjct: 248 KEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCED 307
Query: 133 HHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 192
+ ++ ++ +G QPD TY L L K I +F + + G TY
Sbjct: 308 GRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEI---LSLFGRMIRSGVRPKMDTY 364
Query: 193 NTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
++ + G L + M+++G D + +I AL +KG D A
Sbjct: 365 VMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAR 416
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 112/234 (47%), Gaps = 10/234 (4%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA--- 68
PN VT+ + Y + V +A ++ + + D S+ +++ LC+ K V EA
Sbjct: 115 PNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNL-RDETSFYNLVDALCEHKHVVEAEEL 173
Query: 69 ---LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 125
N++ S + NT +N ++ G K G E +M G D+ +Y+ +
Sbjct: 174 CFGKNVIGNGFS---VSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIY 230
Query: 126 LDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 185
+D +CK K + L K++ + ++ D+ YN ++ + ++ VF+++ ++G
Sbjct: 231 MDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGC 290
Query: 186 NLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
N T+NT+I LC++G +A ++ +M GC D IT+ + S L + E
Sbjct: 291 EPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSE 344
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 3/148 (2%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M ++G +PNV T+N+++ C + A + + M + G PD ++Y + + L K
Sbjct: 285 MRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEK--- 341
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+E L+L +M + P TY L+ + G + + M G D YN+
Sbjct: 342 PSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNA 401
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQP 152
+DAL + +D +++I++G+ P
Sbjct: 402 VIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 9/117 (7%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQ---AVFNTMTQMGVFPDVLSYSIMIN 57
ML M K+G +P+ +TY CL + + K ++F M + GV P + +Y +++
Sbjct: 316 MLDEMPKRGCQPDSITY------MCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMR 369
Query: 58 GLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRG 114
+ + L + K M P++ YN++ID L + G + A E +EM RG
Sbjct: 370 KFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERG 426
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 129/281 (45%), Gaps = 51/281 (18%)
Query: 7 KQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVN 66
+ GV+ T+ L+D C + EV+ A + M+Q V D YS +++ +CK K +
Sbjct: 172 RMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSS 231
Query: 67 -------------------------------------EALNLLKQMHSEKIIPNTITYNS 89
E +++L QM +++ P+ + Y
Sbjct: 232 CFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTI 291
Query: 90 LIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKG 149
++ G+ A +L DE+ + G D+ TYN +++ LCK + ++ + ++ + G
Sbjct: 292 VLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLG 351
Query: 150 IQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMING-------LCKE 202
+P++ TYNIL+ L K G + A+ +++++ G N N+ T++ MI+ +C
Sbjct: 352 SEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAH 411
Query: 203 GLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
GL +EA + ++ + E +IS L EKG D+A
Sbjct: 412 GLLEEAFNMNVFVKSS-------RIEEVISRLCEKGLMDQA 445
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 121/240 (50%), Gaps = 11/240 (4%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMT---QMGVFPDVLSYSIMINGLCKMKMVNEA 68
P+ T N+L+ LV + + V + +MGV + ++ I+I+ LC++ V+ A
Sbjct: 141 PSAYTLNALL--LVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDALCRIGEVDCA 198
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELL----DEMHVRGQPADIITYNS 124
L++ M + +I + Y+ L+ +CK K S+ ++++ D R P + Y
Sbjct: 199 TELVRYMSQDSVIVDPRLYSRLLSSVCK-HKDSSCFDVIGYLEDLRKTRFSPG-LRDYTV 256
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ L +G + ++++ ++ ++PD+ Y I+L G+ A ++F +L G
Sbjct: 257 VMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLG 316
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ +TYN INGLCK+ + AL +MS M G + +T+ +I AL + G+ +A+
Sbjct: 317 LAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAK 376
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 105/214 (49%), Gaps = 6/214 (2%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQM---GVFPDVLSYSIMINGLCK 61
+ K P + Y +M + E + + V + + QM V PD++ Y+I++ G+
Sbjct: 242 LRKTRFSPGLRDYTVVMR---FLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIA 298
Query: 62 MKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 121
+ +A L ++ + P+ TYN I+GLCK + A +++ M+ G +++T
Sbjct: 299 DEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVT 358
Query: 122 YNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF 181
YN + AL K + + L K++ G+ + T++I++ + + A + ++ F
Sbjct: 359 YNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAF 418
Query: 182 KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM 215
+ + +I+ LC++GL D+A+ L++ +
Sbjct: 419 NMNVFVKSSRIEEVISRLCEKGLMDQAVELLAHL 452
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 56/107 (52%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M++ M K G +PNVVTYN L+ ++++A+ ++ M GV + ++ IMI+
Sbjct: 343 MMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYI 402
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELL 107
++ V A LL++ + + + +I LC+ G + A ELL
Sbjct: 403 EVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELL 449
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 120/240 (50%), Gaps = 2/240 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMG-VFPDVLSYSIMINGL 59
+ VM+ +G+KP + Y SL+ Y ++KA + M + PDV +++++I+
Sbjct: 166 LFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCC 225
Query: 60 CKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQP-AD 118
CK+ + +++ +M + +T+TYN++IDG K G +L +M G D
Sbjct: 226 CKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPD 285
Query: 119 IITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 178
+ T NS + + G ++ K + + G+QPD+ T+NIL+ K G K V
Sbjct: 286 VCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMD 345
Query: 179 DLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
+ K+ ++L TYN +I K G ++ + KM+ G + IT+ ++++A + G
Sbjct: 346 FMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAG 405
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 108/216 (50%), Gaps = 1/216 (0%)
Query: 1 MLAVMMKQGVK-PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGL 59
+LA M++ G P+V T NS++ Y + K ++ ++ MGV PD+ +++I+I
Sbjct: 272 VLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSF 331
Query: 60 CKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADI 119
K M + +++ M T+TYN +I+ K G++ ++ +M +G +
Sbjct: 332 GKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNS 391
Query: 120 ITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
ITY S ++A K V K ++++++++ + D +N +++ + G + +E++
Sbjct: 392 ITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQ 451
Query: 180 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM 215
+ ++ + T+ TMI G+FD L +M
Sbjct: 452 MEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQM 487
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 9/176 (5%)
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
NLL++ H + P TY L L + A L + M G I Y S +
Sbjct: 131 FNLLRKQHWYE--PRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISV 188
Query: 129 LCKGHHVDKGIALI---KKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 185
K +DK + + K V D +PD+ T+ +L+ CK GR + + ++ G
Sbjct: 189 YGKSELLDKAFSTLEYMKSVSD--CKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGV 246
Query: 186 NLNNWTYNTMINGLCKEGLFDEALTLMSKM-EDNGCIHDPITFETIISALFEKGEN 240
+ TYNT+I+G K G+F+E ++++ M ED + D T +II + + G N
Sbjct: 247 GCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGS-YGNGRN 301
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 68/146 (46%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M K+ VTYN +++ + + K VF M GV P+ ++Y ++N K +
Sbjct: 347 MEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGL 406
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V + ++L+Q+ + ++ +T +N +I+ + G ++ EL +M R D IT+ +
Sbjct: 407 VVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFAT 466
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGI 150
+ D L K++I I
Sbjct: 467 MIKTYTAHGIFDAVQELEKQMISSDI 492
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 107/221 (48%), Gaps = 1/221 (0%)
Query: 24 YCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSE-KIIP 82
Y V AQ VF+ M + LS++ ++N K + + K++ + I P
Sbjct: 116 YGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEP 175
Query: 83 NTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALI 142
+ +YN+LI GLC G + A L+DE+ +G D IT+N L ++G +
Sbjct: 176 DVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIW 235
Query: 143 KKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKE 202
++++K ++ D+ +YN L GL + ++ +F L + +T+ MI G E
Sbjct: 236 ARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSE 295
Query: 203 GLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
G DEA+T ++E NGC F +++ A+ + G+ + A
Sbjct: 296 GKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESA 336
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 121/241 (50%), Gaps = 1/241 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMT-QMGVFPDVLSYSIMINGLCKMK 63
M ++ K +++N+L++ + + + +F + ++ + PDV SY+ +I GLC
Sbjct: 132 MPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKG 191
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
EA+ L+ ++ ++ + P+ IT+N L+ GK ++ M + DI +YN
Sbjct: 192 SFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYN 251
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ L L + ++ ++L K+ ++PD+ T+ ++ G G++ +A ++++ K
Sbjct: 252 ARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKN 311
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
G + +N+++ +CK G + A L ++ + D + ++ AL + + D+A
Sbjct: 312 GCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEA 371
Query: 244 E 244
E
Sbjct: 372 E 372
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 74/143 (51%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ A M+++ VK ++ +YN+ + G + N+ + ++F+ + + PDV +++ MI G
Sbjct: 234 IWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFV 293
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++EA+ K++ P +NSL+ +CK G + +A+EL E+ + D
Sbjct: 294 SEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEA 353
Query: 121 TYNSFLDALCKGHHVDKGIALIK 143
+DAL KG D+ +++
Sbjct: 354 VLQEVVDALVKGSKQDEAEEIVE 376
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 111/219 (50%), Gaps = 7/219 (3%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALN 70
+P+VV+Y ++++ ++ KA ++ M PDV + +I+ LC K + EAL
Sbjct: 279 RPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALE 338
Query: 71 LLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRG---QPADIITYNSFLD 127
+ +++ + PN +TYNSL+ LCK + WEL++EM ++G P D+ T++ L
Sbjct: 339 VFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDV-TFSYLLK 397
Query: 128 ALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
+ VD +++++ + YN++ + + + +E++ ++ + G
Sbjct: 398 YSQRSKDVD---IVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGP 454
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPIT 226
+ TY I+GL +G EAL+ +M G + +P T
Sbjct: 455 DQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRT 493
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 112/229 (48%), Gaps = 5/229 (2%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
++ N +++G+C++ V++A+ + + PDV+SY MIN L K + +A+ L
Sbjct: 246 DIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELY 305
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 132
+ M + P+ N++ID LC ++ A E+ E+ +G +++TYNS L LCK
Sbjct: 306 RAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKI 365
Query: 133 HHVDKGIALIKKVIDKG--IQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 190
+K L++++ KG P+ T++ LL R KD V + + K + +
Sbjct: 366 RRTEKVWELVEEMELKGGSCSPNDVTFSYLLK---YSQRSKDVDIVLERMAKNKCEMTSD 422
Query: 191 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
YN M + ++ + S+ME +G D T+ I L KG+
Sbjct: 423 LYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGK 471
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 111/221 (50%), Gaps = 3/221 (1%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
N TY L++ Y ++V++A VF + G+ D++++ ++ LC+ K V A L
Sbjct: 177 NEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLF 236
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 132
E + N +++G C G V A ++ D+++Y + ++AL K
Sbjct: 237 CSRRRE-FGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKK 295
Query: 133 HHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 192
+ K + L + + D PD+ N ++D LC RI +A EVF+++ +KG + N TY
Sbjct: 296 GKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTY 355
Query: 193 NTMINGLCKEGLFDEALTLMSKMEDNG--CIHDPITFETII 231
N+++ LCK ++ L+ +ME G C + +TF ++
Sbjct: 356 NSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLL 396
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 95/177 (53%), Gaps = 3/177 (1%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVF-NTMTQMGVFPDVLSYSIMINGLCKMKMVNE 67
G+ ++V ++ L+ C V A+ +F + + G D+ + ++++NG C + V+E
Sbjct: 208 GIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGC--DIKAMNMILNGWCVLGNVHE 265
Query: 68 ALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 127
A K + + K P+ ++Y ++I+ L K GK+ A EL M + D+ N+ +D
Sbjct: 266 AKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVID 325
Query: 128 ALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
ALC + + + + +++ +KG P++ TYN LL LCK R + E+ +++ KG
Sbjct: 326 ALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKG 382
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 110/232 (47%), Gaps = 2/232 (0%)
Query: 4 VMMKQGVK-PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKM 62
+++KQ V + + YN ++D + + VF+ M++ F + +Y +++N
Sbjct: 132 LVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAA 191
Query: 63 KMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 122
V+EA+ + ++ I + + ++ L+ LC+ V A E L R DI
Sbjct: 192 HKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFA-ETLFCSRRREFGCDIKAM 250
Query: 123 NSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 182
N L+ C +V + K +I +PD+ +Y +++ L K G++ A E+++ ++
Sbjct: 251 NMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWD 310
Query: 183 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
N + N +I+ LC + EAL + ++ + G + +T+ +++ L
Sbjct: 311 TRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHL 362
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 127/231 (54%), Gaps = 23/231 (9%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
+VVT+ ++ GY + ++ +A+ +F+ + +V++++ M++G + K ++ A L
Sbjct: 76 DVVTWTHVITGYIKLGDMREARELFDRVDSR---KNVVTWTAMVSGYLRSKQLSIAEMLF 132
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 132
++M N +++N++IDG ++G++ A EL DEM R +I+++NS + AL +
Sbjct: 133 QEMPER----NVVSWNTMIDGYAQSGRIDKALELFDEMPER----NIVSWNSMVKALVQR 184
Query: 133 HHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 192
+D+ + L +++ + D+ ++ ++DGL K G++ +A+ +F + ++ N+ +W
Sbjct: 185 GRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPER--NIISW-- 236
Query: 193 NTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
N MI G + DEA L M + D ++ T+I+ E +KA
Sbjct: 237 NAMITGYAQNNRIDEADQLFQVMPE----RDFASWNTMITGFIRNREMNKA 283
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 124/233 (53%), Gaps = 24/233 (10%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALN 70
+ NVVT+ +++ GY +++ A+ +F M + +V+S++ MI+G + +++AL
Sbjct: 106 RKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPER----NVVSWNTMIDGYAQSGRIDKALE 161
Query: 71 LLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 130
L +M N +++NS++ L + G++ A L + M R D++++ + +D L
Sbjct: 162 LFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLA 213
Query: 131 KGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 190
K VD+ +++ D + ++ ++N ++ G + RI +A ++FQ + ++ +
Sbjct: 214 KNGKVDEA----RRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFA---- 265
Query: 191 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
++NTMI G + ++A L +M + I++ T+I+ E EN++A
Sbjct: 266 SWNTMITGFIRNREMNKACGLFDRMPEKNV----ISWTTMITGYVENKENEEA 314
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 122/222 (54%), Gaps = 21/222 (9%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
NVV++N+++DGY ++KA +F+ M + +++S++ M+ L + ++EA+NL
Sbjct: 139 NVVSWNTMIDGYAQSGRIDKALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLF 194
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 132
++M ++ ++ +++DGL K GKV A L D M R +II++N+ + +
Sbjct: 195 ERMPRRDVV----SWTAMVDGLAKNGKVDEARRLFDCMPER----NIISWNAMITGYAQN 246
Query: 133 HHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 192
+ +D+ L + + ++ D ++N ++ G + + A +F + +K N+ +WT
Sbjct: 247 NRIDEADQLFQVMPER----DFASWNTMITGFIRNREMNKACGLFDRMPEK--NVISWT- 299
Query: 193 NTMINGLCKEGLFDEALTLMSKMEDNGCIHDPI-TFETIISA 233
TMI G + +EAL + SKM +G + + T+ +I+SA
Sbjct: 300 -TMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSA 340
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 89/175 (50%), Gaps = 15/175 (8%)
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
NL++ ++S P LI LCK GK++ A +L D + R D++T+ +
Sbjct: 31 FNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPER----DVVTWTHVITG 86
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
K + + L +V + ++ T+ ++ G + ++ A+ +FQ++ ++ N+
Sbjct: 87 YIKLGDMREARELFDRVDSR---KNVVTWTAMVSGYLRSKQLSIAEMLFQEMPER--NVV 141
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+W NTMI+G + G D+AL L +M + +++ +++ AL ++G D+A
Sbjct: 142 SW--NTMIDGYAQSGRIDKALELFDEMPERNI----VSWNSMVKALVQRGRIDEA 190
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 111/233 (47%), Gaps = 18/233 (7%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
N++++N+++ GY N +++A +F M + D S++ MI G + + +N+A L
Sbjct: 232 NIISWNAMITGYAQNNRIDEADQLFQVMPER----DFASWNTMITGFIRNREMNKACGLF 287
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQ-PADIITYNSFLDALCK 131
+M + N I++ ++I G + + A + +M G ++ TY S L A
Sbjct: 288 DRMPEK----NVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSD 343
Query: 132 GHHVDKGIALIKKVIDKGI-QPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 190
+ +G I ++I K + Q + + LL+ K G + A+++F + +L +W
Sbjct: 344 LAGLVEG-QQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISW 402
Query: 191 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA-----LFEKG 238
N+MI G EA+ + ++M +G +T+ ++ A L EKG
Sbjct: 403 --NSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKG 453
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 89/206 (43%), Gaps = 42/206 (20%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
+ ++N+++ G+ E+NKA +F+ M + +V+S++ MI G + K EALN+
Sbjct: 263 DFASWNTMITGFIRNREMNKACGLFDRMPE----KNVISWTTMITGYVENKENEEALNVF 318
Query: 73 KQMHSE-KIIPNTITY-----------------------------------NSLIDGLCK 96
+M + + PN TY ++L++ K
Sbjct: 319 SKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSK 378
Query: 97 TGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCT 156
+G++ A ++ D V + D+I++NS + H + I + ++ G +P T
Sbjct: 379 SGELIAARKMFDNGLVCQR--DLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVT 436
Query: 157 YNILLDGLCKCGRIKDAQEVFQDLFK 182
Y LL G ++ E F+DL +
Sbjct: 437 YLNLLFACSHAGLVEKGMEFFKDLVR 462
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 95.9 bits (237), Expect = 2e-20, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 102/224 (45%), Gaps = 44/224 (19%)
Query: 8 QGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNE 67
GV PN +YN LM +CL ++++ A +F M + V PDV SY I+I G C+ VN
Sbjct: 184 HGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNG 243
Query: 68 ALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 127
A+ LL M ++ +P+ +LI GLC G + L+EM
Sbjct: 244 AMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEM----------------- 282
Query: 128 ALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
I KG P N L+ G C G++++A +V + + K G L
Sbjct: 283 ------------------ISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETL 324
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 231
++ T+ +I +C E DE+ + +ED + + IT +T I
Sbjct: 325 HSDTWEMVIPLICNE---DESEKIKLFLED--AVKEEITGDTRI 363
Score = 80.5 bits (197), Expect = 1e-15, Method: Composition-based stats.
Identities = 44/178 (24%), Positives = 86/178 (48%), Gaps = 4/178 (2%)
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ +A L K ++PNT +YN L+ C +S A++L +M R D+ +Y
Sbjct: 171 LQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKI 230
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ C+ V+ + L+ +++KG PD L+ GLC G + ++ +++ KG
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKG 286
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 242
++ + N ++ G C G +EA ++ + NG T+E +I + + E++K
Sbjct: 287 FSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEK 344
Score = 77.4 bits (189), Expect = 9e-15, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 5/169 (2%)
Query: 52 YSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCK-TGKVSNAWELLDEM 110
++ +I + K+ + L+ +M P N ++D L G + A+EL
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181
Query: 111 HVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRI 170
+ G + +YN + A C + L K++++ + PD+ +Y IL+ G C+ G++
Sbjct: 182 RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQV 241
Query: 171 KDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 219
A E+ D+ KG+ + T+I GLC +G+FDE + +M G
Sbjct: 242 NGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKG 286
Score = 66.6 bits (161), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ M+++ V P+V +Y L+ G+C +VN A + + M G PD +I GLC
Sbjct: 212 LFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLC 267
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
M +E L++M S+ P+ N L+ G C GKV A ++++ + G+
Sbjct: 268 DQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSD 327
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPD 153
T+ + +C +K ++ + + I D
Sbjct: 328 TWEMVIPLICNEDESEKIKLFLEDAVKEEITGD 360
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 104/223 (46%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALN 70
+PNVVTYN L+ + +V++ A+F + V PDV +++ +++ K M+ E
Sbjct: 205 QPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEA 264
Query: 71 LLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 130
+L +M S + P+ IT+N LID K + + + + + T+NS +
Sbjct: 265 VLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYG 324
Query: 131 KGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 190
K +DK + KK+ D P TY ++ CG + A+E+F+++ + L
Sbjct: 325 KARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKAS 384
Query: 191 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
T N M+ C+ GL+ EA L D T++ + A
Sbjct: 385 TLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKA 427
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 102/225 (45%), Gaps = 5/225 (2%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC----KMKMVNE 67
P+ Y+ L+ + A +F+ M G PD Y+ +I K K + +
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 68 ALNLLKQMHS-EKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 126
L +M E+ PN +TYN L+ ++GKV L ++ + D+ T+N +
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 127 DALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 186
DA K + + A++ ++ +PD+ T+N+L+D K + ++ F+ L +
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 187 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 231
T+N+MI K + D+A + KM D I IT+E +I
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMI 355
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 90/184 (48%), Gaps = 6/184 (3%)
Query: 67 EALNLLKQMHSEK-IIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 125
+ L + + M ++ IP+ Y+ LI + K G+ A L EM G D YN+
Sbjct: 115 QCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNAL 174
Query: 126 LDALCKGHHVDKGIALIKKVIDK--GI---QPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
+ A K + ++ +DK GI QP++ TYNILL + G++ +F+DL
Sbjct: 175 ITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDL 234
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+ + +T+N +++ K G+ E ++++M N C D ITF +I + +K E
Sbjct: 235 DMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEF 294
Query: 241 DKAE 244
+K E
Sbjct: 295 EKME 298
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 4/183 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M KP+++T+N L+D Y E K + F ++ + P + +++ MI
Sbjct: 265 VLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYG 324
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K +M+++A + K+M+ IP+ ITY +I G VS A E+ +E+ +
Sbjct: 325 KARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKAS 384
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
T N+ L+ C+ + L + PD TY L K D +E Q L
Sbjct: 385 TLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKA----DMKEQVQIL 440
Query: 181 FKK 183
KK
Sbjct: 441 MKK 443
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 4/151 (2%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYS--IMINGLCKM 62
+M+ KP + T+NS++ Y ++KA+ VF M M P ++Y IM+ G C
Sbjct: 304 LMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC-- 361
Query: 63 KMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 122
V+ A + +++ + T N++++ C+ G A +L D TY
Sbjct: 362 GSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTY 421
Query: 123 NSFLDALCKGHHVDKGIALIKKVIDKGIQPD 153
A K ++ L+KK+ GI P+
Sbjct: 422 KFLYKAYTKADMKEQVQILMKKMEKDGIVPN 452
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 104/223 (46%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALN 70
+PNVVTYN L+ + +V++ A+F + V PDV +++ +++ K M+ E
Sbjct: 205 QPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEA 264
Query: 71 LLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 130
+L +M S + P+ IT+N LID K + + + + + T+NS +
Sbjct: 265 VLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYG 324
Query: 131 KGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 190
K +DK + KK+ D P TY ++ CG + A+E+F+++ + L
Sbjct: 325 KARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKAS 384
Query: 191 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
T N M+ C+ GL+ EA L D T++ + A
Sbjct: 385 TLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKA 427
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 102/225 (45%), Gaps = 5/225 (2%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC----KMKMVNE 67
P+ Y+ L+ + A +F+ M G PD Y+ +I K K + +
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 68 ALNLLKQMHS-EKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 126
L +M E+ PN +TYN L+ ++GKV L ++ + D+ T+N +
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 127 DALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 186
DA K + + A++ ++ +PD+ T+N+L+D K + ++ F+ L +
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 187 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 231
T+N+MI K + D+A + KM D I IT+E +I
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMI 355
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 90/184 (48%), Gaps = 6/184 (3%)
Query: 67 EALNLLKQMHSEK-IIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 125
+ L + + M ++ IP+ Y+ LI + K G+ A L EM G D YN+
Sbjct: 115 QCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNAL 174
Query: 126 LDALCKGHHVDKGIALIKKVIDK--GI---QPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
+ A K + ++ +DK GI QP++ TYNILL + G++ +F+DL
Sbjct: 175 ITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDL 234
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+ + +T+N +++ K G+ E ++++M N C D ITF +I + +K E
Sbjct: 235 DMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEF 294
Query: 241 DKAE 244
+K E
Sbjct: 295 EKME 298
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 4/183 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M KP+++T+N L+D Y E K + F ++ + P + +++ MI
Sbjct: 265 VLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYG 324
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K +M+++A + K+M+ IP+ ITY +I G VS A E+ +E+ +
Sbjct: 325 KARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKAS 384
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
T N+ L+ C+ + L + PD TY L K D +E Q L
Sbjct: 385 TLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKA----DMKEQVQIL 440
Query: 181 FKK 183
KK
Sbjct: 441 MKK 443
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 4/151 (2%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYS--IMINGLCKM 62
+M+ KP + T+NS++ Y ++KA+ VF M M P ++Y IM+ G C
Sbjct: 304 LMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC-- 361
Query: 63 KMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 122
V+ A + +++ + T N++++ C+ G A +L D TY
Sbjct: 362 GSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTY 421
Query: 123 NSFLDALCKGHHVDKGIALIKKVIDKGIQPD 153
A K ++ L+KK+ GI P+
Sbjct: 422 KFLYKAYTKADMKEQVQILMKKMEKDGIVPN 452
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 113/228 (49%), Gaps = 14/228 (6%)
Query: 17 YNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK-------MVNEAL 69
Y SL+ G+ + V +A+ V M G+ PD+ ++ ++ LC+ +V EAL
Sbjct: 211 YRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEAL 270
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
N++ +M S KI P +++YN L+ L +T +V + ++L++M G D +Y + L
Sbjct: 271 NIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVL 330
Query: 130 CKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 189
KG ++ ++I++G +P+ Y L+ LC R+ A ++F+ + +
Sbjct: 331 YLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYG 390
Query: 190 WTYNTMINGLCKEG-------LFDEALTLMSKMEDNGCIHDPITFETI 230
Y+ +I LCK G L++EAL++ + + + DP E
Sbjct: 391 QVYDLLIPKLCKGGNFEKGRELWEEALSIDVTLSCSISLLDPSVTEVF 438
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 103/237 (43%), Gaps = 14/237 (5%)
Query: 16 TYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQM 75
T +++ C V +A V + + ++ Y ++ G + V EA +++ M
Sbjct: 175 TVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDM 234
Query: 76 HSEKIIPNTITYNSLIDGLCK-------TGKVSNAWELLDEMH-VRGQPADIITYNSFLD 127
S I P+ +NSL+ LC+ +G V A ++ EM + QP + +YN L
Sbjct: 235 KSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSM-SYNILLS 293
Query: 128 ALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
L + V + +++++ G PD +Y ++ L GR ++ ++ ++G+
Sbjct: 294 CLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRP 353
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMSKMEDN-----GCIHDPITFETIISALFEKGE 239
Y +I LC + AL L KM+ + G ++D + + FEKG
Sbjct: 354 ERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGR 410
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 19/209 (9%)
Query: 48 DVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELL 107
D ++SI+ L K+ +A+ + K + + T ++I LC G V A L
Sbjct: 137 DKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRA---L 193
Query: 108 DEMHVRGQPADIITYN--SFLDALCKGHHVDKGIALIKKVI----DKGIQPDMCTYNILL 161
MH D+I+ N S +L G V + + ++VI GI PD+ +N LL
Sbjct: 194 GVMH---HHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLL 250
Query: 162 DGLCK-------CGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSK 214
LC+ G + +A + ++ + +YN +++ L + E+ ++ +
Sbjct: 251 TCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQ 310
Query: 215 MEDNGCIHDPITFETIISALFEKGENDKA 243
M+ +GC D ++ ++ L+ G K
Sbjct: 311 MKRSGCDPDTGSYYFVVRVLYLTGRFGKG 339
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 13/174 (7%)
Query: 71 LLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNA---WELLDEMHVRGQPADIITYNSFLD 127
LL + E + T++ + + L K GK +A +++LD+ P D T + +
Sbjct: 125 LLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSC---PQDGFTVTAIIS 181
Query: 128 ALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
ALC HV + + ++ D ++ Y LL G +K+A+ V QD+ G
Sbjct: 182 ALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITP 241
Query: 188 NNWTYNTMINGLCKE-------GLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
+ + +N+++ LC+ GL EAL +M +M +++ ++S L
Sbjct: 242 DLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCL 295
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 97/191 (50%), Gaps = 1/191 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
++A M ++G+KPN ++ ++ G+ ++ ++ V M GV V +Y+I I LC
Sbjct: 209 IVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLC 268
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K K EA LL M S + PNT+TY+ LI G C A +L M RG D
Sbjct: 269 KRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSE 328
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
Y + + LCKG + ++L K+ ++K P L++GL K ++++A+E+ +
Sbjct: 329 CYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQV 388
Query: 181 FKK-GYNLNNW 190
+K N+ W
Sbjct: 389 KEKFTRNVELW 399
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 110/211 (52%), Gaps = 2/211 (0%)
Query: 10 VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQM-GVFPDVLSYSIMINGLCKMKMVNEA 68
+ V + N+L+ + + +A+ V+ M +M G+ PD+ +Y+ MI C+ + +
Sbjct: 147 ISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSS 206
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
+++ +M + I PN+ ++ +I G K ++L M RG + TYN + +
Sbjct: 207 YSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQS 266
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
LCK + AL+ ++ G++P+ TY+ L+ G C ++A+++F+ + +G +
Sbjct: 267 LCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPD 326
Query: 189 NWTYNTMINGLCKEGLFDEALTL-MSKMEDN 218
+ Y T+I LCK G F+ AL+L ME N
Sbjct: 327 SECYFTLIYYLCKGGDFETALSLCKESMEKN 357
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 102/209 (48%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G++P++ TYN ++ +C + + ++ M + G+ P+ S+ +MI+G +E
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
+L M + TYN I LCK K A LLD M G + +TY+ +
Sbjct: 242 GKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHG 301
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
C ++ L K ++++G +PD Y L+ LCK G + A + ++ +K + +
Sbjct: 302 FCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPS 361
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMED 217
+++NGL K+ +EA L+ ++++
Sbjct: 362 FSIMKSLVNGLAKDSKVEEAKELIGQVKE 390
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 104/205 (50%), Gaps = 4/205 (1%)
Query: 17 YNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMH 76
+N+L+ C + A+ V++++ PD+ +++I+++G K EA ++M
Sbjct: 183 FNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNILLSG---WKSSEEAEAFFEEMK 238
Query: 77 SEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVD 136
+ + P+ +TYNSLID CK ++ A++L+D+M + D+ITY + + L D
Sbjct: 239 GKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPD 298
Query: 137 KGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMI 196
K ++K++ + G PD+ YN + C R+ DA ++ ++ KKG + N TYN
Sbjct: 299 KAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFF 358
Query: 197 NGLCKEGLFDEALTLMSKMEDNGCI 221
L + L +M N C+
Sbjct: 359 RVLSLANDLGRSWELYVRMLGNECL 383
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 95/181 (52%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M +G+KP+VVTYNSL+D YC E+ KA + + M + PDV++Y+ +I GL +
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
++A +LK+M P+ YN+ I C ++ +A +L+DEM +G + TYN
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
F L + + + L +++ P+ + L+ + ++ A +++D+ KG
Sbjct: 357 FFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKG 416
Query: 185 Y 185
+
Sbjct: 417 F 417
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 4/189 (2%)
Query: 46 FPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWE 105
F D ++ ++ LC+ K + +A N+ + + P+ T+N L+ G + +
Sbjct: 177 FFDTACFNALLRTLCQEKSMTDARNVYHSL-KHQFQPDLQTFNILLSGWKSSEEAEAF-- 233
Query: 106 LLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLC 165
+EM +G D++TYNS +D CK ++K LI K+ ++ PD+ TY ++ GL
Sbjct: 234 -FEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLG 292
Query: 166 KCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPI 225
G+ A+EV +++ + G + YN I C +A L+ +M G +
Sbjct: 293 LIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNAT 352
Query: 226 TFETIISAL 234
T+ L
Sbjct: 353 TYNLFFRVL 361
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 10/130 (7%)
Query: 118 DIITYNSFLDALCKGHHVDKGIALIKKV---IDKGIQPDMCTYNILLDGLCKCGRIKDAQ 174
D +N+ L LC+ +K + + V + QPD+ T+NILL G +
Sbjct: 179 DTACFNALLRTLCQ----EKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSSEEAEAFF 234
Query: 175 EVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
E + KG + TYN++I+ CK+ ++A L+ KM + D IT+ T+I L
Sbjct: 235 EEMKG---KGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGL 291
Query: 235 FEKGENDKAE 244
G+ DKA
Sbjct: 292 GLIGQPDKAR 301
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 54/114 (47%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M + G P+V YN+ + +C+ + A + + M + G+ P+ +Y++ L
Sbjct: 303 VLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLS 362
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRG 114
+ + L +M + +PNT + LI + KV A L ++M V+G
Sbjct: 363 LANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKG 416
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
+ L ++M ++ NT+TY +LI GL + G A E+ EM G P DI+TYN LD
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 129 LCKGHHVDKGIALIKKVID----------KGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 178
LCK ++K + + KV D KG++P++ TY ++ G CK G ++A +F+
Sbjct: 61 LCKNGKLEKAL-VAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFR 119
Query: 179 DLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
+ + G ++ TYNT+I ++G + L+ +M D T+ +++ + G
Sbjct: 120 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDG 178
Query: 239 ENDKA 243
DK
Sbjct: 179 RLDKG 183
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 94/186 (50%), Gaps = 10/186 (5%)
Query: 36 VFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLC 95
+F M+Q G+ + ++Y+ +I GL + + A + K+M S+ + P+ +TYN L+DGLC
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 96 K---------TGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVI 146
K GKV + W+L + ++G +++TY + + CK ++ L +K+
Sbjct: 63 KNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMK 122
Query: 147 DKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFD 206
+ G PD TYN L+ + G + E+ +++ + + TY ++ + +G D
Sbjct: 123 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG-LVTDMLHDGRLD 181
Query: 207 EALTLM 212
+ M
Sbjct: 182 KGFLEM 187
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 83/167 (49%), Gaps = 9/167 (5%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M ++G+ N VTY +L+ G + + AQ +F M GV PD+++Y+I+++GLCK
Sbjct: 7 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGK 66
Query: 65 VNEAL---------NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQ 115
+ +AL +L + + + PN +TY ++I G CK G A+ L +M G
Sbjct: 67 LEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGP 126
Query: 116 PADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLD 162
D TYN+ + A + LIK++ D TY ++ D
Sbjct: 127 LPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 75/144 (52%), Gaps = 10/144 (6%)
Query: 5 MMKQGVKPNVVTYNSLMDGYC---------LVNEVNKAQAVFNTMTQMGVFPDVLSYSIM 55
M+ GV P+++TYN L+DG C + +V +F +++ GV P+V++Y+ M
Sbjct: 42 MVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 101
Query: 56 INGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQ 115
I+G CK EA L ++M + +P++ TYN+LI + G + + EL+ EM
Sbjct: 102 ISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRF 161
Query: 116 PADIITYNSFLDALCKGHHVDKGI 139
D TY D L G +DKG
Sbjct: 162 AGDASTYGLVTDMLHDG-RLDKGF 184
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 117/236 (49%), Gaps = 1/236 (0%)
Query: 10 VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQM-GVFPDVLSYSIMINGLCKMKMVNEA 68
+ V + N+L+ + + +A V+ M +M G+ PD+ +Y+ MI LC+ + +
Sbjct: 142 IPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSS 201
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
+++ +M + I P ++ +IDG K K +++ M G + TYN +
Sbjct: 202 YSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQC 261
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
LCK + ALI V+ ++P+ TY++L+ G C + +A +F+ + GY +
Sbjct: 262 LCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPD 321
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ Y T+I+ LCK G F+ AL L + + + + +++ L + + D+A+
Sbjct: 322 SECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAK 377
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 97/192 (50%), Gaps = 3/192 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
++A M ++ +KP ++ ++DG+ + ++ + V M + GV V +Y+IMI LC
Sbjct: 204 IVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLC 263
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K K EA L+ + S ++ PN++TY+ LI G C + A L + M G D
Sbjct: 264 KRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSE 323
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQE---VF 177
Y + + LCKG + + L ++ ++K P L++GL ++ +A+E V
Sbjct: 324 CYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELIAVV 383
Query: 178 QDLFKKGYNLNN 189
++ F + +L N
Sbjct: 384 KEKFTRNVDLWN 395
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 101/206 (49%), Gaps = 2/206 (0%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G++P++ TYN ++ C + + ++ M + + P S+ +MI+G K + +E
Sbjct: 177 GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEV 236
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLD-EMHVRGQPADIITYNSFLD 127
+++ M + TYN +I LCK K + A L+D M R +P + +TY+ +
Sbjct: 237 RKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRP-NSVTYSLLIH 295
Query: 128 ALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
C ++D+ + L + ++ G +PD Y L+ LCK G + A + ++ +K +
Sbjct: 296 GFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVP 355
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMS 213
+ ++NGL DEA L++
Sbjct: 356 SFSVMKWLVNGLASRSKVDEAKELIA 381
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 120/273 (43%), Gaps = 43/273 (15%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
+++K + + +SL+D Y EV A+ VF+ + + D++ ++ MI+G
Sbjct: 142 LVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQ----DLVVFNAMISGYANNS 197
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
+EALNL+K M I P+ IT+N+LI G E+L+ M + G D++++
Sbjct: 198 QADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWT 257
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCT----------------------YNI-- 159
S + L +K K+++ G+ P+ T Y++
Sbjct: 258 SIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVT 317
Query: 160 -----------LLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 208
LLD KCG I +A +F+ KK T+N+MI GL D+A
Sbjct: 318 GLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKK----TTVTFNSMIFCYANHGLADKA 373
Query: 209 LTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
+ L +ME G D +TF I++A G D
Sbjct: 374 VELFDQMEATGEKLDHLTFTAILTACSHAGLTD 406
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 4/209 (1%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G+KP+V+T+N+L+ G+ + K + M G PDV+S++ +I+GL +A
Sbjct: 213 GIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKA 272
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
+ KQM + + PN+ T +L+ + + E+ V G ++ LD
Sbjct: 273 FDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDM 332
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
K + + + L +K K T+N ++ G A E+F + G L+
Sbjct: 333 YGKCGFISEAMILFRKTPKK----TTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLD 388
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMED 217
+ T+ ++ GL D L M++
Sbjct: 389 HLTFTAILTACSHAGLTDLGQNLFLLMQN 417
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 94/226 (41%), Gaps = 46/226 (20%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPD------------ 48
+L +M G KP+VV++ S++ G + KA F M G++P+
Sbjct: 240 ILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACT 299
Query: 49 VLSY-----------------------SIMINGLCKMKMVNEALNLLKQMHSEKIIPNTI 85
L+Y S +++ K ++EA+ L ++ + T+
Sbjct: 300 TLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKK----TTV 355
Query: 86 TYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKV 145
T+NS+I G A EL D+M G+ D +T+ + L A D G L +
Sbjct: 356 TFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLM 415
Query: 146 IDK-GIQPDMCTYNILLDGLCKCGRIKDAQEVFQ------DLFKKG 184
+K I P + Y ++D L + G++ +A E+ + DLF G
Sbjct: 416 QNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWG 461
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 90.9 bits (224), Expect = 8e-19, Method: Composition-based stats.
Identities = 63/244 (25%), Positives = 109/244 (44%), Gaps = 14/244 (5%)
Query: 10 VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEAL 69
++P+VV YN++++ + A V + Q G P ++Y +++ + + N
Sbjct: 589 LEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVH 648
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
++M I PN + Y L++ L K GK A +++M RG Y L
Sbjct: 649 EFFRKMQKSSI-PNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCL 707
Query: 130 CKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 189
C ++G+ ++KK+ +P + TY L+ G IK+A +F D KK + N
Sbjct: 708 CSAGRCNEGLNMLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIF-DQMKKVCSPNL 766
Query: 190 WTYNTMINGLCKEGLFDEALTLMSKMEDNG------------CIHDPITFETIISALFEK 237
T N M+ + GLF+EA L KM ++G + D TF T++ E+
Sbjct: 767 VTCNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQ 826
Query: 238 GEND 241
+ D
Sbjct: 827 EKWD 830
Score = 80.9 bits (198), Expect = 7e-16, Method: Composition-based stats.
Identities = 55/220 (25%), Positives = 107/220 (48%), Gaps = 16/220 (7%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L + ++G KP+ VTY +M+ + N F M Q P+ L+Y +++N L
Sbjct: 615 VLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKM-QKSSIPNALAYRVLVNTLW 673
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEM-HVRGQPADI 119
K +EA++ ++ M S I+ + Y L LC G+ + +L ++ V +P +
Sbjct: 674 KEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNMLKKICRVANKPL-V 732
Query: 120 ITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
+TY + A ++ K A I + K P++ T NI+L + G ++A+E+FQ
Sbjct: 733 VTYTGLIQACVDSGNI-KNAAYIFDQMKKVCSPNLVTCNIMLKAYLQGGLFEEARELFQK 791
Query: 180 LFKKGYNLNN------------WTYNTMINGLCKEGLFDE 207
+ + G ++ N +T+NTM++ ++ +D+
Sbjct: 792 MSEDGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQEKWDD 831
Score = 53.9 bits (128), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/223 (19%), Positives = 96/223 (43%), Gaps = 17/223 (7%)
Query: 32 KAQAVFNTMT-QMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSE------------ 78
+A VF+ M Q+ +PD+++Y + L + + E ++ M S
Sbjct: 525 EALNVFHAMLLQISSYPDMVAYRSIAVTLGQAGHIKELFYVIDTMRSPPKKKFKPTTLEK 584
Query: 79 ---KIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHV 135
++ P+ + YN++++ + + A+ +L ++ RGQ +TY ++ +
Sbjct: 585 WDPRLEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKY 644
Query: 136 DKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTM 195
+ +K+ I P+ Y +L++ L K G+ +A +D+ +G + Y +
Sbjct: 645 NLVHEFFRKMQKSSI-PNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDL 703
Query: 196 INGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
LC G +E L ++ K+ +T+ +I A + G
Sbjct: 704 ARCLCSAGRCNEGLNMLKKICRVANKPLVVTYTGLIQACVDSG 746
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 121/242 (50%), Gaps = 12/242 (4%)
Query: 3 AVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKM 62
+++K+G++ + N+++ Y + +A +F M DV++++ MI G K
Sbjct: 150 GMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGF----DVVAWNSMIMGFAKC 205
Query: 63 KMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 122
++++A NL +M N +++NS+I G + G+ +A ++ EM + D T
Sbjct: 206 GLIDQAQNLFDEMPQR----NGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTM 261
Query: 123 NSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 182
S L+A ++G + + ++ + + L+D CKCG I++ VF+ K
Sbjct: 262 VSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPK 321
Query: 183 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 242
K L+ W N+MI GL G + A+ L S++E +G D ++F +++A GE +
Sbjct: 322 K--QLSCW--NSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHR 377
Query: 243 AE 244
A+
Sbjct: 378 AD 379
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 119/265 (44%), Gaps = 41/265 (15%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
+VV +NS++ G+ +++AQ +F+ M Q + +S++ MI+G + +AL++
Sbjct: 191 DVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR----NGVSWNSMISGFVRNGRFKDALDMF 246
Query: 73 KQMHSEKIIPNTITYNSLID-----GLCKTGK------VSNAWEL-------LDEMHVR- 113
++M + + P+ T SL++ G + G+ V N +EL L +M+ +
Sbjct: 247 REMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKC 306
Query: 114 ------------GQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILL 161
+ +NS + L ++ + L ++ G++PD ++ +L
Sbjct: 307 GCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVL 366
Query: 162 DGLCKCGRIKDAQEVFQDLFKKGYNLNNWT--YNTMINGLCKEGLFDEALTLMSKMEDNG 219
G + A E F+ L K+ Y + Y M+N L GL +EA L+ M
Sbjct: 367 TACAHSGEVHRADEFFR-LMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVE- 424
Query: 220 CIHDPITFETIISALFEKGENDKAE 244
D + + +++SA + G + A+
Sbjct: 425 --EDTVIWSSLLSACRKIGNVEMAK 447
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 124/241 (51%), Gaps = 8/241 (3%)
Query: 1 MLAVMMKQGVKPNVVTYNSL---MDGYCLVNEVNKAQAVFNTMTQM-GVFPDVLSYSIMI 56
++M++ G+ +VVT SL + C E+ +A+ + M + GV +++++ MI
Sbjct: 196 FFSLMVESGI--DVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMI 253
Query: 57 NGLCKMKMVNEALNL-LKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQ 115
G C + E L+L LK M E ++ + +Y LIDG GKV A L+ MH +
Sbjct: 254 -GCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKL 312
Query: 116 PADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQE 175
+ YN ++ + V+K I L ++ +G+ P+ TY +L++GLCK G++ +A
Sbjct: 313 RVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMS 372
Query: 176 VFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALF 235
+L + ++ Y+T+ + G+ D++L ++++M +G I E + +LF
Sbjct: 373 FLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERLADSLF 432
Query: 236 E 236
E
Sbjct: 433 E 433
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 92/184 (50%), Gaps = 1/184 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L +M K+ V ++ +Y L+DG+ +V +A+ + M + + Y++++NG
Sbjct: 268 VLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYS 327
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ +V + + L +M S + PN TY L++GLCK GKV A L+E+ V D
Sbjct: 328 RFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEE 387
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
Y++ + + +DK + ++ ++I G P L D L + R K+AQ + +
Sbjct: 388 MYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERLADSLFEVNR-KEAQMLITIV 446
Query: 181 FKKG 184
K G
Sbjct: 447 VKCG 450
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 116/264 (43%), Gaps = 35/264 (13%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M KPN+ TY +L++ + KA+ +F + + G+ PDV Y+ ++ +
Sbjct: 312 MRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGY 371
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
A + M P+ +YN ++D + G S+A + +EM G + ++
Sbjct: 372 PYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHML 431
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQP-------------------------------- 152
L A K V K A++K++ + G++P
Sbjct: 432 LLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGP 491
Query: 153 ---DMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEAL 209
D+ TYNIL++ K G ++ +E+F +L +K + + T+ + I ++ L+ + L
Sbjct: 492 CTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCL 551
Query: 210 TLMSKMEDNGCIHDPITFETIISA 233
+ +M D+GC D T + ++SA
Sbjct: 552 EVFEEMIDSGCAPDGGTAKVLLSA 575
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 112/245 (45%), Gaps = 4/245 (1%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
++ K +P+V+ +N L+D Y + +A++++ + + P +Y+++I C
Sbjct: 167 ILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAG 226
Query: 64 MVNEALNLLKQMHSEKIIPNTI---TYNSLIDGLCKT-GKVSNAWELLDEMHVRGQPADI 119
++ A +L +M + + P TI YN+ I+GL K G A ++ M
Sbjct: 227 LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 286
Query: 120 ITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
TYN ++ K L ++ +P++CTY L++ + G + A+E+F+
Sbjct: 287 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 346
Query: 180 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
L + G + + YN ++ + G A + S M+ GC D ++ ++ A G
Sbjct: 347 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 406
Query: 240 NDKAE 244
+ AE
Sbjct: 407 HSDAE 411
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 115/241 (47%), Gaps = 2/241 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M + KP TYN +++ Y ++ + ++ M P++ +Y+ ++N + +
Sbjct: 277 MKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGL 336
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+A + +Q+ + + P+ YN+L++ + G A E+ M G D +YN
Sbjct: 337 CEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNI 396
Query: 125 FLDALCK-GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+DA + G H D A+ +++ GI P M ++ +LL K + + + +++ +
Sbjct: 397 MVDAYGRAGLHSD-AEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSEN 455
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
G + + N+M+N + G F + ++++ME+ C D T+ +I+ + G ++
Sbjct: 456 GVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERI 515
Query: 244 E 244
E
Sbjct: 516 E 516
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 113/238 (47%), Gaps = 6/238 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ ++M G +P+ +YN ++D Y + A+AVF M ++G+ P + S+ ++++
Sbjct: 378 IFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYS 437
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + V + ++K+M + P+T NS+++ + G+ + ++L EM ADI
Sbjct: 438 KARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIS 497
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN ++ K +++ L ++ +K +PD+ T+ + + EVF+++
Sbjct: 498 TYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEM 557
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
G + T +++ E ++ +++ M H +T +++ L K
Sbjct: 558 IDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM------HKGVTVSSLVPKLMAKS 609
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 111/249 (44%), Gaps = 6/249 (2%)
Query: 1 MLAVMMKQGVKPN---VVTYNSLMDGYCLVNEVNKAQA--VFNTMTQMGVFPDVLSYSIM 55
+L M V P V YN+ ++G + + N +A VF M + P +Y++M
Sbjct: 234 VLVEMQNHHVSPKTIGVTVYNAYIEG-LMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLM 292
Query: 56 INGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQ 115
IN K + L +M S + PN TY +L++ + G A E+ +++ G
Sbjct: 293 INLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGL 352
Query: 116 PADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQE 175
D+ YN+ +++ + + + + G +PD +YNI++D + G DA+
Sbjct: 353 EPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEA 412
Query: 176 VFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALF 235
VF+++ + G ++ +++ K + ++ +M +NG D ++++
Sbjct: 413 VFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYG 472
Query: 236 EKGENDKAE 244
G+ K E
Sbjct: 473 RLGQFTKME 481
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 116/264 (43%), Gaps = 35/264 (13%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M KPN+ TY +L++ + KA+ +F + + G+ PDV Y+ ++ +
Sbjct: 290 MRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGY 349
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
A + M P+ +YN ++D + G S+A + +EM G + ++
Sbjct: 350 PYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHML 409
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQP-------------------------------- 152
L A K V K A++K++ + G++P
Sbjct: 410 LLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGP 469
Query: 153 ---DMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEAL 209
D+ TYNIL++ K G ++ +E+F +L +K + + T+ + I ++ L+ + L
Sbjct: 470 CTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCL 529
Query: 210 TLMSKMEDNGCIHDPITFETIISA 233
+ +M D+GC D T + ++SA
Sbjct: 530 EVFEEMIDSGCAPDGGTAKVLLSA 553
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 112/245 (45%), Gaps = 4/245 (1%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
++ K +P+V+ +N L+D Y + +A++++ + + P +Y+++I C
Sbjct: 145 ILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAG 204
Query: 64 MVNEALNLLKQMHSEKIIPNTI---TYNSLIDGLCKT-GKVSNAWELLDEMHVRGQPADI 119
++ A +L +M + + P TI YN+ I+GL K G A ++ M
Sbjct: 205 LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 264
Query: 120 ITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
TYN ++ K L ++ +P++CTY L++ + G + A+E+F+
Sbjct: 265 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 324
Query: 180 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
L + G + + YN ++ + G A + S M+ GC D ++ ++ A G
Sbjct: 325 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 384
Query: 240 NDKAE 244
+ AE
Sbjct: 385 HSDAE 389
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 115/241 (47%), Gaps = 2/241 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M + KP TYN +++ Y ++ + ++ M P++ +Y+ ++N + +
Sbjct: 255 MKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGL 314
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+A + +Q+ + + P+ YN+L++ + G A E+ M G D +YN
Sbjct: 315 CEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNI 374
Query: 125 FLDALCK-GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+DA + G H D A+ +++ GI P M ++ +LL K + + + +++ +
Sbjct: 375 MVDAYGRAGLHSD-AEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSEN 433
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
G + + N+M+N + G F + ++++ME+ C D T+ +I+ + G ++
Sbjct: 434 GVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERI 493
Query: 244 E 244
E
Sbjct: 494 E 494
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 113/237 (47%), Gaps = 6/237 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ ++M G +P+ +YN ++D Y + A+AVF M ++G+ P + S+ ++++
Sbjct: 356 IFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYS 415
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + V + ++K+M + P+T NS+++ + G+ + ++L EM ADI
Sbjct: 416 KARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIS 475
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
TYN ++ K +++ L ++ +K +PD+ T+ + + EVF+++
Sbjct: 476 TYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEM 535
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK 237
G + T +++ E ++ +++ M H +T +++ L K
Sbjct: 536 IDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM------HKGVTVSSLVPKLMAK 586
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 111/249 (44%), Gaps = 6/249 (2%)
Query: 1 MLAVMMKQGVKPN---VVTYNSLMDGYCLVNEVNKAQA--VFNTMTQMGVFPDVLSYSIM 55
+L M V P V YN+ ++G + + N +A VF M + P +Y++M
Sbjct: 212 VLVEMQNHHVSPKTIGVTVYNAYIEG-LMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLM 270
Query: 56 INGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQ 115
IN K + L +M S + PN TY +L++ + G A E+ +++ G
Sbjct: 271 INLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGL 330
Query: 116 PADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQE 175
D+ YN+ +++ + + + + G +PD +YNI++D + G DA+
Sbjct: 331 EPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEA 390
Query: 176 VFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALF 235
VF+++ + G ++ +++ K + ++ +M +NG D ++++
Sbjct: 391 VFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYG 450
Query: 236 EKGENDKAE 244
G+ K E
Sbjct: 451 RLGQFTKME 459
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 114/241 (47%), Gaps = 1/241 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+++G+KP+ T+ +++ +A F M+ G PD ++ + MI+ +
Sbjct: 201 MLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGN 260
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V+ AL+L + +EK + +T+++LI +G + +EM G +++ YN
Sbjct: 261 VDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNR 320
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+D++ + + + K +I G P+ TY L+ + DA +++++ +KG
Sbjct: 321 LIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKG 380
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMED-NGCIHDPITFETIISALFEKGENDKA 243
+L YNT+++ DEA + M++ C D TF ++I+ G +A
Sbjct: 381 LSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEA 440
Query: 244 E 244
E
Sbjct: 441 E 441
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 112/227 (49%), Gaps = 2/227 (0%)
Query: 8 QGVKPN--VVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMV 65
+ +KP+ V+ YN M + ++ K++ +F+ M + G+ PD +++ +I+ + +
Sbjct: 167 ETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVP 226
Query: 66 NEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 125
A+ ++M S P+ +T ++ID + G V A L D D +T+++
Sbjct: 227 KRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTL 286
Query: 126 LDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 185
+ + D + + +++ G++P++ YN L+D + + R A+ +++DL G+
Sbjct: 287 IRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGF 346
Query: 186 NLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIIS 232
N TY ++ + D+AL + +M++ G I + T++S
Sbjct: 347 TPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLS 393
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
++ G PN TY +L+ Y + A A++ M + G+ V+ Y+ +++ +
Sbjct: 341 LITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRY 400
Query: 65 VNEALNLLKQMHS-EKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
V+EA + + M + E P++ T++SLI +G+VS A L +M G +
Sbjct: 401 VDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLT 460
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKC 167
S + K VD + +V++ GI PD D C C
Sbjct: 461 SVIQCYGKAKQVDDVVRTFDQVLELGITPD--------DRFCGC 496
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 97/216 (44%), Gaps = 8/216 (3%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
+ VT+++L+ Y + + ++ M +GV P+++ Y+ +I+ + + K +A +
Sbjct: 279 DAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIY 338
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 132
K + + PN TY +L+ + +A + EM +G +I YN+ L
Sbjct: 339 KDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADN 398
Query: 133 HHVDKGIALIKKVID-KGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT 191
+VD+ + + + + + PD T++ L+ GR+ +A+ + + G+ +
Sbjct: 399 RYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFV 458
Query: 192 YNTMIN--GLCKE-----GLFDEALTLMSKMEDNGC 220
++I G K+ FD+ L L +D C
Sbjct: 459 LTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFC 494
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 115/273 (42%), Gaps = 43/273 (15%)
Query: 10 VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEAL 69
V + N LM C VN + A VF M G +PD SY I++ G C + EA
Sbjct: 148 VNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEAT 207
Query: 70 NLLKQMH---SEK-IIPNTITYNSLIDGLCKTGKVSNA---------------------- 103
+LL M S+K + + Y L+D LC G+V +A
Sbjct: 208 HLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHI 267
Query: 104 ----WE-----------LLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDK 148
WE LL E +RG + +Y++ L + + +G ++ + K
Sbjct: 268 EAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSK 327
Query: 149 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN-WTYNTMINGLCKEGLFDE 207
G +P Y + LC+ G++K+A V +G+ L YN +I GLC +G E
Sbjct: 328 GFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSME 387
Query: 208 ALTLMSKMEDN-GCIHDPITFETIISALFEKGE 239
A+ + KM C+ + T++T++ L G+
Sbjct: 388 AVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQ 420
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 90/182 (49%), Gaps = 4/182 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNT-MTQMGVFPDVLSYSIMINGL 59
+L M +G +P Y + + C ++ +A +V N M Q P V Y+++I GL
Sbjct: 320 VLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGL 379
Query: 60 CKMKMVNEALNLLKQMHSE-KIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPAD 118
C EA+ LK+M + + N TY +L+DGLC+ G+ A ++++EM ++
Sbjct: 380 CDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPG 439
Query: 119 IITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 178
+ TY+ + LC + + +++++ + + P+ + L + +C C D E+ +
Sbjct: 440 VETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVCFCA--IDVVEILE 497
Query: 179 DL 180
L
Sbjct: 498 HL 499
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 110/221 (49%), Gaps = 8/221 (3%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M + ++G ++V Y L+D C EV+ A + + + G+ Y + G
Sbjct: 213 MFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAG-- 270
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTI----TYNSLIDGLCKTGKVSNAWELLDEMHVRGQP 116
+ +E + +K++ +E +I I +Y+++ L + GK+ E+L M +G
Sbjct: 271 HWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFE 330
Query: 117 ADIITYNSFLDALCKGHHVDKGIALIKKVIDKG-IQPDMCTYNILLDGLCKCGRIKDAQE 175
Y + + ALC+ + + +++I K + +G P + YN+L+ GLC G+ +A
Sbjct: 331 PTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVG 390
Query: 176 VFQDLFKKGYNL-NNWTYNTMINGLCKEGLFDEALTLMSKM 215
+ + K+ + N TY T+++GLC++G F EA +M +M
Sbjct: 391 YLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEM 431
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 101/219 (46%), Gaps = 4/219 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNE--VNKAQAVFNTMTQMGVFPDVLSYSIMING 58
+L ++++G+K Y+ + G+ + + + + + G P + SYS M
Sbjct: 248 ILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATD 307
Query: 59 LCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPAD 118
L + + E +L M S+ P Y + + LC+ GK+ A ++++ ++G
Sbjct: 308 LFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLP 367
Query: 119 II-TYNSFLDALCKGHHVDKGIALIKKVIDK-GIQPDMCTYNILLDGLCKCGRIKDAQEV 176
+ YN + LC + + +KK+ + + TY L+DGLC+ G+ +A +V
Sbjct: 368 TVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQV 427
Query: 177 FQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM 215
+++ K + TY+ MI GLC EA+ + +M
Sbjct: 428 MEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEM 466
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 92/202 (45%), Gaps = 2/202 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L + +G P + +Y+++ ++ + + V M G P Y + LC
Sbjct: 285 LLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALC 344
Query: 61 KMKMVNEALNLL-KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQ-PAD 118
+ + EA++++ K+M +P YN LI GLC GK A L +M + A+
Sbjct: 345 RAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVAN 404
Query: 119 IITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 178
TY + +D LC+ + ++++++ K P + TY++++ GLC R +A +
Sbjct: 405 EETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLE 464
Query: 179 DLFKKGYNLNNWTYNTMINGLC 200
++ + + + + +C
Sbjct: 465 EMVSQDMVPESSVWKALAESVC 486
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 115/273 (42%), Gaps = 43/273 (15%)
Query: 10 VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEAL 69
V + N LM C VN + A VF M G +PD SY I++ G C + EA
Sbjct: 148 VNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEAT 207
Query: 70 NLLKQMH---SEK-IIPNTITYNSLIDGLCKTGKVSNA---------------------- 103
+LL M S+K + + Y L+D LC G+V +A
Sbjct: 208 HLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHI 267
Query: 104 ----WE-----------LLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDK 148
WE LL E +RG + +Y++ L + + +G ++ + K
Sbjct: 268 EAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSK 327
Query: 149 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN-WTYNTMINGLCKEGLFDE 207
G +P Y + LC+ G++K+A V +G+ L YN +I GLC +G E
Sbjct: 328 GFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSME 387
Query: 208 ALTLMSKMEDN-GCIHDPITFETIISALFEKGE 239
A+ + KM C+ + T++T++ L G+
Sbjct: 388 AVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQ 420
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 90/182 (49%), Gaps = 4/182 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNT-MTQMGVFPDVLSYSIMINGL 59
+L M +G +P Y + + C ++ +A +V N M Q P V Y+++I GL
Sbjct: 320 VLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGL 379
Query: 60 CKMKMVNEALNLLKQMHSE-KIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPAD 118
C EA+ LK+M + + N TY +L+DGLC+ G+ A ++++EM ++
Sbjct: 380 CDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPG 439
Query: 119 IITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 178
+ TY+ + LC + + +++++ + + P+ + L + +C C D E+ +
Sbjct: 440 VETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVCFCA--IDVVEILE 497
Query: 179 DL 180
L
Sbjct: 498 HL 499
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 110/221 (49%), Gaps = 8/221 (3%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M + ++G ++V Y L+D C EV+ A + + + G+ Y + G
Sbjct: 213 MFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAG-- 270
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTI----TYNSLIDGLCKTGKVSNAWELLDEMHVRGQP 116
+ +E + +K++ +E +I I +Y+++ L + GK+ E+L M +G
Sbjct: 271 HWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFE 330
Query: 117 ADIITYNSFLDALCKGHHVDKGIALIKKVIDKG-IQPDMCTYNILLDGLCKCGRIKDAQE 175
Y + + ALC+ + + +++I K + +G P + YN+L+ GLC G+ +A
Sbjct: 331 PTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVG 390
Query: 176 VFQDLFKKGYNL-NNWTYNTMINGLCKEGLFDEALTLMSKM 215
+ + K+ + N TY T+++GLC++G F EA +M +M
Sbjct: 391 YLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEM 431
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 101/219 (46%), Gaps = 4/219 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNE--VNKAQAVFNTMTQMGVFPDVLSYSIMING 58
+L ++++G+K Y+ + G+ + + + + + G P + SYS M
Sbjct: 248 ILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATD 307
Query: 59 LCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPAD 118
L + + E +L M S+ P Y + + LC+ GK+ A ++++ ++G
Sbjct: 308 LFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLP 367
Query: 119 II-TYNSFLDALCKGHHVDKGIALIKKVIDK-GIQPDMCTYNILLDGLCKCGRIKDAQEV 176
+ YN + LC + + +KK+ + + TY L+DGLC+ G+ +A +V
Sbjct: 368 TVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQV 427
Query: 177 FQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM 215
+++ K + TY+ MI GLC EA+ + +M
Sbjct: 428 MEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEM 466
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 92/202 (45%), Gaps = 2/202 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L + +G P + +Y+++ ++ + + V M G P Y + LC
Sbjct: 285 LLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALC 344
Query: 61 KMKMVNEALNLL-KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQ-PAD 118
+ + EA++++ K+M +P YN LI GLC GK A L +M + A+
Sbjct: 345 RAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVAN 404
Query: 119 IITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 178
TY + +D LC+ + ++++++ K P + TY++++ GLC R +A +
Sbjct: 405 EETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLE 464
Query: 179 DLFKKGYNLNNWTYNTMINGLC 200
++ + + + + +C
Sbjct: 465 EMVSQDMVPESSVWKALAESVC 486
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 88/159 (55%), Gaps = 4/159 (2%)
Query: 10 VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEAL 69
V + V YN ++ + ++N A + M +G++PDV++Y+ MING C +++A
Sbjct: 161 VCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAW 220
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQ----PADIITYNSF 125
L K+M + N++TY+ +++G+CK+G + A ELL EM + +TY
Sbjct: 221 RLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLV 280
Query: 126 LDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGL 164
+ A C+ V++ + ++ ++ ++G P+ T +L+ G+
Sbjct: 281 IQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGV 319
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 105/212 (49%), Gaps = 4/212 (1%)
Query: 36 VFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLC 95
V + + F +V + I++ + + +EAL +L++ + +T+ YN +I
Sbjct: 117 VIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFA 176
Query: 96 KTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMC 155
G ++ A L+ EM G D+ITY S ++ C +D L K++ +
Sbjct: 177 DKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSV 236
Query: 156 TYNILLDGLCKCGRIKDAQEVFQDLFKKG----YNLNNWTYNTMINGLCKEGLFDEALTL 211
TY+ +L+G+CK G ++ A E+ ++ K+ + N TY +I C++ +EAL +
Sbjct: 237 TYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLV 296
Query: 212 MSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ +M + GC+ + +T +I + E E+ KA
Sbjct: 297 LDRMGNRGCMPNRVTACVLIQGVLENDEDVKA 328
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 7/195 (3%)
Query: 27 VNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTIT 86
N ++A V + V D ++Y+++I +N A L+K+M + P+ IT
Sbjct: 143 ANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVIT 202
Query: 87 YNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKV- 145
Y S+I+G C GK+ +AW L EM + +TY+ L+ +CK +++ + L+ ++
Sbjct: 203 YTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEME 262
Query: 146 -IDKG--IQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKE 202
D G I P+ TY +++ C+ R+++A V + +G N T +I G+ +
Sbjct: 263 KEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLEN 322
Query: 203 GLFDEALTLMSKMED 217
DE + +SK+ D
Sbjct: 323 ---DEDVKALSKLID 334
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 121/275 (44%), Gaps = 42/275 (15%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G+ P+V+TY S+++GYC +++ A + M++ + ++YS ++ G+CK + A
Sbjct: 195 GLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERA 254
Query: 69 LNLLKQMHSEK----IIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT--- 121
L LL +M E I PN +TY +I C+ +V A +LD M RG + +T
Sbjct: 255 LELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACV 314
Query: 122 ---------------------------------YNSFLDALCKGHHVDKGIALIKKVIDK 148
++S +L + ++ + + ++ +
Sbjct: 315 LIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVR 374
Query: 149 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY--NLNNWTYNTMINGLCKEGLFD 206
G++PD + + LC R D ++Q++ KK +++ + ++ GLC++G
Sbjct: 375 GVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSW 434
Query: 207 EALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
EA L M D E II AL + G+ D
Sbjct: 435 EAAKLAKSMLDKKMRLKVSHVEKIIEALKKTGDED 469
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 118/238 (49%), Gaps = 7/238 (2%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
+ K G+ N YN +++ +++ F M + G P+ ++++++++ K K+
Sbjct: 655 IRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKL 714
Query: 65 ---VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 121
VNE L LL + H + + I+YN++I K +N + M G +
Sbjct: 715 FKKVNE-LFLLAKRHG---VVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEA 770
Query: 122 YNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF 181
YN+ LDA K ++K +++K++ PD TYNI+++ + G I + +V ++L
Sbjct: 771 YNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELK 830
Query: 182 KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
+ G + +YNT+I G+ +EA+ L+ +M I D +T+ +++AL E
Sbjct: 831 ESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDE 888
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 116/234 (49%), Gaps = 3/234 (1%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
+M++ GV+PNV T LM Y V +A+ F+ M + G+ + +YS MI +++
Sbjct: 235 MMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCES-AYSSMITIYTRLR 293
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
+ ++A ++ M +++ + +++ + GK+ A +L M G +II YN
Sbjct: 294 LYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYN 353
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ + K ++ L ++ + G++PD +Y +++G + ++A+ +Q+L +
Sbjct: 354 TLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRC 413
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK 237
GY N++ T+IN K G D A+ + M GC + I II +EK
Sbjct: 414 GYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSIL--GIILQAYEK 465
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 1/215 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M++ G PN VT+N L+D Y K +F + GV DV+SY+ +I K K
Sbjct: 690 MIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVV-DVISYNTIIAAYGKNKD 748
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ +K M + + YN+L+D K ++ +L M D TYN
Sbjct: 749 YTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNI 808
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
++ + +D+ ++K++ + G+ PD+C+YN L+ G +++A + +++ +
Sbjct: 809 MINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRN 868
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 219
+ TY ++ L + F EA+ M+ G
Sbjct: 869 IIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMG 903
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 114/236 (48%), Gaps = 6/236 (2%)
Query: 1 MLAVMMKQ-GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGL 59
+L +M +Q + P+V + ++ Y + +K Q ++ + + G+ + Y+ +IN
Sbjct: 615 VLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCC 674
Query: 60 CKMKMVNEALNLLKQMHSEKIIPNTITYNSLID--GLCKTGKVSNAWELLDEMHVRGQPA 117
+ ++E ++M PNT+T+N L+D G K K N LL + H
Sbjct: 675 ARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRH---GVV 731
Query: 118 DIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVF 177
D+I+YN+ + A K + IK + G + YN LLD K +++ + +
Sbjct: 732 DVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSIL 791
Query: 178 QDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
+ + K +++TYN MIN ++G DE ++ +++++G D ++ T+I A
Sbjct: 792 KRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKA 847
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 123/279 (44%), Gaps = 38/279 (13%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M G PN++ YN+L+ GY + ++ AQ +F+ + +G+ PD SY MI G
Sbjct: 336 ILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWG 395
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLI---------DGLCKT-------------- 97
+ EA + +++ PN+ +LI DG KT
Sbjct: 396 RADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSI 455
Query: 98 -GKVSNAWELLDEMHV-----RGQPADII-----TYNSFLDALCKGHHVDKGIALI--KK 144
G + A+E + ++ V +G + I +++S + A K VD + L+ KK
Sbjct: 456 LGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKK 515
Query: 145 VIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGL 204
D + + Y++L+ + G++ DA +++ + +N +TMI+ G
Sbjct: 516 WRDSAFESHL--YHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGE 573
Query: 205 FDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
F EA L ++ +G + D I F ++ + G ++A
Sbjct: 574 FSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEA 612
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 81/165 (49%)
Query: 2 LAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCK 61
L ++ K+ +V++YN+++ Y + + M G + +Y+ +++ K
Sbjct: 721 LFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGK 780
Query: 62 MKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 121
K + + ++LK+M P+ TYN +I+ + G + ++L E+ G D+ +
Sbjct: 781 DKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCS 840
Query: 122 YNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCK 166
YN+ + A G V++ + L+K++ + I PD TY L+ L +
Sbjct: 841 YNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRR 885
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 102/236 (43%), Gaps = 2/236 (0%)
Query: 5 MMKQG-VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
+MKQ V+ + + +++ Y ++ A+++ +M G P++++Y+ +I G K+
Sbjct: 304 LMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIF 363
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
+ A L ++ + + P+ +Y S+I+G + A E+ G +
Sbjct: 364 KMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLF 423
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ ++ K D I I+ + G Q I+L K G+I V + F
Sbjct: 424 TLINLQAKYGDRDGAIKTIEDMTGIGCQYS-SILGIILQAYEKVGKIDVVPCVLKGSFHN 482
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
LN ++++++ K G+ D+ L L+ + + + + +I + E G+
Sbjct: 483 HIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQ 538
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M K P+ TYN +++ Y +++ V + + G+ PD+ SY+ +I
Sbjct: 790 ILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYG 849
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNA--WEL 106
MV EA+ L+K+M IIP+ +TY +L+ L + + A W L
Sbjct: 850 IGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSL 897
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 89.0 bits (219), Expect = 3e-18, Method: Composition-based stats.
Identities = 52/213 (24%), Positives = 103/213 (48%)
Query: 7 KQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVN 66
+ G K + TYN+LM + KA ++ +M + D +Y ++I L K ++
Sbjct: 271 ESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLD 330
Query: 67 EALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 126
A L +QM K+ P+ ++SL+D + K G++ + ++ EM G + S +
Sbjct: 331 AAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLI 390
Query: 127 DALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 186
D+ K +D + L ++ G +P+ Y ++++ K G+++ A VF+D+ K G+
Sbjct: 391 DSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFL 450
Query: 187 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 219
TY+ ++ G D A+ + + M + G
Sbjct: 451 PTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAG 483
Score = 71.6 bits (174), Expect = 5e-13, Method: Composition-based stats.
Identities = 52/238 (21%), Positives = 107/238 (44%), Gaps = 1/238 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M G +P+ + SL+D Y +++ A +++ M + G P+ Y+++I K
Sbjct: 374 MQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGK 433
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ A+ + K M +P TY+ L++ +G+V +A ++ + M G + +Y S
Sbjct: 434 LEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYIS 493
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
L L VD ++ ++ G D+C ++L+ + K + A + + + G
Sbjct: 494 LLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMIYI-KDASVDLALKWLRFMGSSG 552
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 242
NN+ + K GL+D A L+ + + D + + +I++ L + DK
Sbjct: 553 IKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILAHLVRCQDEDK 610
Score = 70.9 bits (172), Expect = 8e-13, Method: Composition-based stats.
Identities = 47/227 (20%), Positives = 98/227 (43%)
Query: 17 YNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMH 76
YN ++ ++ A F + G D +Y+ ++ + +A + + M
Sbjct: 246 YNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESME 305
Query: 77 SEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVD 136
+ + TY +I L K+G++ A++L +M R ++S +D++ K +D
Sbjct: 306 KTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLD 365
Query: 137 KGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMI 196
+ + ++ G +P + L+D K G++ A ++ ++ K G+ N Y +I
Sbjct: 366 TSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMII 425
Query: 197 NGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
K G + A+T+ ME G + P T+ ++ G+ D A
Sbjct: 426 ESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSA 472
Score = 65.1 bits (157), Expect = 4e-11, Method: Composition-based stats.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 3/211 (1%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLS---YSIMINGLCKMKMVNEA 68
P+ Y L DG + Q++F M Q LS Y+ +I L K + + A
Sbjct: 203 PSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVA 262
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
K+ +T TYN+L+ G A+E+ + M D TY + +
Sbjct: 263 FCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPS 322
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
L K +D L +++ ++ ++P ++ L+D + K GR+ + +V+ ++ G+ +
Sbjct: 323 LAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPS 382
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNG 219
+ ++I+ K G D AL L +M+ +G
Sbjct: 383 ATMFVSLIDSYAKAGKLDTALRLWDEMKKSG 413
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 88.6 bits (218), Expect = 3e-18, Method: Composition-based stats.
Identities = 44/117 (37%), Positives = 71/117 (60%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M + G+ P+V+ Y +L+DGY + E++KA+ +F MT G P+V +Y+ MI GLC
Sbjct: 715 MKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGE 774
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 121
EA LLK+M S PN + Y++L+ L K GK+S A +++ EM +G +++
Sbjct: 775 FREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKGHYVHLVS 831
Score = 80.1 bits (196), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 67/118 (56%)
Query: 68 ALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 127
AL L M I P+ + Y +LIDG +G++ A E+ EM V+GQ ++ TYNS +
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 128 ALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 185
LC + L+K++ +G P+ Y+ L+ L K G++ +A++V +++ KKG+
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKGH 825
Score = 73.2 bits (178), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 64/117 (54%)
Query: 33 AQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLID 92
A N M ++G+ P VL Y+ +I+G +++A + ++M + +PN TYNS+I
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 93 GLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKG 149
GLC G+ A LL EM RG + + Y++ + L K + + +IK+++ KG
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 71.2 bits (173), Expect = 6e-13, Method: Composition-based stats.
Identities = 37/113 (32%), Positives = 62/113 (54%)
Query: 131 KGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 190
KG+ + + + + GI P + Y L+DG G + A+E+F+++ KG N +
Sbjct: 701 KGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVF 760
Query: 191 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
TYN+MI GLC G F EA L+ +ME GC + + + T++ L + G+ +A
Sbjct: 761 TYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEA 813
Score = 56.6 bits (135), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 60/124 (48%)
Query: 96 KTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMC 155
K K A L+ M G ++ Y + +D +DK + +++ KG P++
Sbjct: 701 KGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVF 760
Query: 156 TYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM 215
TYN ++ GLC G ++A + +++ +G N N Y+T++ L K G EA ++ +M
Sbjct: 761 TYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEM 820
Query: 216 EDNG 219
G
Sbjct: 821 VKKG 824
Score = 49.7 bits (117), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 40/75 (53%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
M M +G PNV TYNS++ G C+ E +A + M G P+ + YS ++ L
Sbjct: 746 MFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLR 805
Query: 61 KMKMVNEALNLLKQM 75
K ++EA ++K+M
Sbjct: 806 KAGKLSEARKVIKEM 820
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 16/204 (7%)
Query: 11 KPNVVTYNSLMDGY------CLVNEV--NKAQAVFNTMTQMGVFPDVLSYSIMINGLCKM 62
+P + TY+ L +N V +++F M G+ PDV + + ++ G
Sbjct: 242 RPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLS 301
Query: 63 KMVNEALNLLKQMHSEKII----PNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPAD 118
VN+AL + QM ++ PN+ TY+ LI GLC G+ NA ELL EM +G +
Sbjct: 302 LHVNDALRIFHQM---SVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPN 358
Query: 119 IITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 178
+YNS ++A +D + + ++I+ G D +Y L+D C+ G+ +A + +
Sbjct: 359 GKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLE 418
Query: 179 DLFKKGYNLNNWTYNTMINGLCKE 202
L +K ++ +Y+ ++N L K+
Sbjct: 419 MLREKQL-VDRDSYDKLVNVLHKD 441
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 88/166 (53%), Gaps = 8/166 (4%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVF----PDVLSYSIMINGLC 60
M+ G++P+V N L+ GY L VN A +F+ QM V P+ +Y +I+GLC
Sbjct: 279 MVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFH---QMSVVYDCEPNSFTYDYLIHGLC 335
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
A LL +M + +PN +YNSL++ +G++ +A + L EM G+ D I
Sbjct: 336 AQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFI 395
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCK 166
+Y + +D C+ D+ L++ + +K + D +Y+ L++ L K
Sbjct: 396 SYRTLVDESCRKGKYDEATRLLEMLREKQLV-DRDSYDKLVNVLHK 440
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 124/281 (44%), Gaps = 50/281 (17%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFP-DVLSYSIMINGLCKMKMVNEALN 70
P T L D L + +FN +Q F + SY I I L KM E +
Sbjct: 134 PPRFTPEELADAITLEEDPFLCFHLFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDD 193
Query: 71 LLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEM----HVRGQPADIITYNSFL 126
++ Q+ S + I N YNS+I K GK+ A + M ++ +P I TY+
Sbjct: 194 IVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPT-IRTYHILF 252
Query: 127 DALC-KGH-------HVDKGIALIKKVIDKGIQPDM------------------------ 154
AL +G+ +++ +L ++++D GI+PD+
Sbjct: 253 KALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFH 312
Query: 155 ------------CTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKE 202
TY+ L+ GLC GR +A+E+ ++ KG+ N +YN+++N
Sbjct: 313 QMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALS 372
Query: 203 GLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
G D+A+ + +M +NG + D I++ T++ KG+ D+A
Sbjct: 373 GEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEA 413
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L+ M +G PN +YNSL++ + L E++ A M + G D +SY +++ C
Sbjct: 346 LLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESC 405
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCK 96
+ +EA LL +M EK + + +Y+ L++ L K
Sbjct: 406 RKGKYDEATRLL-EMLREKQLVDRDSYDKLVNVLHK 440
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 117/232 (50%), Gaps = 12/232 (5%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
+ +++N+++DGY V+ + A A+F+ M D S+++M++G + V A +
Sbjct: 311 DTISWNTMIDGYVHVSRMEDAFALFSEMPNR----DAHSWNMMVSGYASVGNVELARHYF 366
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 132
++ + +T+++NS+I K A +L M++ G+ D T S L A
Sbjct: 367 EKTPEK----HTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGL 422
Query: 133 HHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 192
++ G+ + +++ K + PD+ +N L+ +CG I +++ +F ++ K + T+
Sbjct: 423 VNLRLGMQM-HQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVI---TW 478
Query: 193 NTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
N MI G G EAL L M+ NG ITF ++++A G D+A+
Sbjct: 479 NAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAK 530
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 104/210 (49%), Gaps = 21/210 (10%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCK---MKMVNEAL 69
N VT+N+++ GY E+N+A+ +F+ M + DV++++ MI+G ++ + EA
Sbjct: 70 NTVTWNTMISGYVKRREMNQARKLFDVMPKR----DVVTWNTMISGYVSCGGIRFLEEAR 125
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
L +M S ++ ++N++I G K ++ A L ++M R + +++++ +
Sbjct: 126 KLFDEMPSR----DSFSWNTMISGYAKNRRIGEALLLFEKMPER----NAVSWSAMITGF 177
Query: 130 CKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL--FKKGYNL 187
C+ VD + L +K+ K P +C L+ GL K R+ +A V G
Sbjct: 178 CQNGEVDSAVVLFRKMPVKDSSP-LCA---LVAGLIKNERLSEAAWVLGQYGSLVSGRED 233
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMSKMED 217
+ YNT+I G + G + A L ++ D
Sbjct: 234 LVYAYNTLIVGYGQRGQVEAARCLFDQIPD 263
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 115/237 (48%), Gaps = 32/237 (13%)
Query: 11 KPNVVTYNSLMDGYCL---VNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNE 67
K +VVT+N+++ GY + + +A+ +F+ M D S++ MI+G K + + E
Sbjct: 99 KRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSR----DSFSWNTMISGYAKNRRIGE 154
Query: 68 ALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 127
AL L ++M N ++++++I G C+ G+V +A L +M V+ D + +
Sbjct: 155 ALLLFEKMPER----NAVSWSAMITGFCQNGEVDSAVVLFRKMPVK----DSSPLCALVA 206
Query: 128 ALCKGHHVDKGIALIKKV--IDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL----- 180
L K + + ++ + + G + + YN L+ G + G+++ A+ +F +
Sbjct: 207 GLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCG 266
Query: 181 ------FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 231
F++ + N ++N+MI K G A L +M+D D I++ T+I
Sbjct: 267 DDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKD----RDTISWNTMI 319
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 110/265 (41%), Gaps = 56/265 (21%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMT----------------------------QMG 44
N V++++++ G+C EV+ A +F M Q G
Sbjct: 166 NAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYG 225
Query: 45 VFPD-----VLSYSIMINGLCKMKMVNEALNLLKQM-----------HSEKIIPNTITYN 88
V +Y+ +I G + V A L Q+ E+ N +++N
Sbjct: 226 SLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWN 285
Query: 89 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDK 148
S+I K G V +A L D+M R D I++N+ +D ++ AL ++ ++
Sbjct: 286 SMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFALFSEMPNR 341
Query: 149 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 208
D ++N+++ G G ++ A+ F+ +K + ++N++I K + EA
Sbjct: 342 ----DAHSWNMMVSGYASVGNVELARHYFEKTPEK----HTVSWNSIIAAYEKNKDYKEA 393
Query: 209 LTLMSKMEDNGCIHDPITFETIISA 233
+ L +M G DP T +++SA
Sbjct: 394 VDLFIRMNIEGEKPDPHTLTSLLSA 418
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 82/156 (52%), Gaps = 13/156 (8%)
Query: 88 NSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVID 147
N ++ + ++G ++ A ++ +++ R + +T+N+ + K +++ +K+ D
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEAR----NTVTWNTMISGYVKRREMNQA----RKLFD 95
Query: 148 KGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDE 207
+ D+ T+N ++ G CG I+ +E + LF + + +++++NTMI+G K E
Sbjct: 96 VMPKRDVVTWNTMISGYVSCGGIRFLEEA-RKLFDEMPSRDSFSWNTMISGYAKNRRIGE 154
Query: 208 ALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
AL L KM + + +++ +I+ + GE D A
Sbjct: 155 ALLLFEKMPE----RNAVSWSAMITGFCQNGEVDSA 186
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 93/209 (44%), Gaps = 8/209 (3%)
Query: 10 VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEAL 69
V P+V +N+L+ Y E+ +++ +F+ +M + +V++++ MI G +EAL
Sbjct: 439 VIPDVPVHNALITMYSRCGEIMESRRIFD---EMKLKREVITWNAMIGGYAFHGNASEAL 495
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNA-WELLDEMHVRGQPADIITYNSFLDA 128
NL M S I P+ IT+ S+++ G V A + + M V + Y+S ++
Sbjct: 496 NLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNV 555
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
++ + +I + +PD + LLD C+ V + + +
Sbjct: 556 TSGQGQFEEAMYIITSM---PFEPDKTVWGALLDA-CRIYNNVGLAHVAAEAMSRLEPES 611
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMED 217
+ Y + N GL+DEA + ME
Sbjct: 612 STPYVLLYNMYADMGLWDEASQVRMNMES 640
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 118/242 (48%), Gaps = 3/242 (1%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQM--GVFPDVLSYSIMINGLCKM 62
M + G + V++N+L++ +K +F+ + Q + PD +SY I+I C
Sbjct: 128 MDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDS 187
Query: 63 KMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 122
+A+ +++QM + + TI + +++ L K G++ A L +EM +G D Y
Sbjct: 188 GTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAY 247
Query: 123 NSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 182
N + + K ++ LI+++ G++PD +YN L+ C+ G + +A++V++ L
Sbjct: 248 NVRIMSAQK-ESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEG 306
Query: 183 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 242
N T+ T+I LC L+++ + K I D T + ++ L E + D
Sbjct: 307 NNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDD 366
Query: 243 AE 244
A+
Sbjct: 367 AK 368
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 93/228 (40%), Gaps = 41/228 (17%)
Query: 52 YSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMH 111
YS +I + M N A+ +QM + +++N+L++ + +L DE+
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 112 VRGQP--ADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGR 169
R D I+Y + + C +K I +++++ KG++ + +L L K G
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 170 IKDAQEVFQDLFKKGYNLNNWTYNTMI--------------------------------- 196
++ A ++ ++ KKG L+N YN I
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPERVKELIEEMSSMGLKPDTISYNYL 284
Query: 197 -NGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII-----SALFEKG 238
C+ G+ DEA + +E N C + TF T+I S L+E+G
Sbjct: 285 MTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQG 332
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 87/188 (46%), Gaps = 3/188 (1%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M +G++ + + +++ E+ A ++N M + G D +Y++ I K +
Sbjct: 200 MQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQK-ES 258
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
L+++M S + P+TI+YN L+ C+ G + A ++ + + + T+ +
Sbjct: 259 PERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRT 318
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK- 183
+ LC ++G A+ KK + PD T L+ GL + + DA+ + + + KK
Sbjct: 319 LIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLIRTVKKKF 378
Query: 184 -GYNLNNW 190
LN W
Sbjct: 379 PPSFLNAW 386
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
++ M G+KP+ ++YN LM YC +++A+ V+ + P+ ++ +I LC
Sbjct: 265 LIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLC 324
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
++ + + K+ IP+ T L+ GL + K +A L+ + + P
Sbjct: 325 YSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLIRTVKKKFPP---- 380
Query: 121 TYNSFLDALCK 131
SFL+A K
Sbjct: 381 ---SFLNAWKK 388
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 118/242 (48%), Gaps = 8/242 (3%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFP-DVLSYSIMINGLCKM 62
+M K P + L+ C + KA+ + +FP DV +++++NG C +
Sbjct: 214 IMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFM--LASKKLFPVDVEGFNVILNGWCNI 271
Query: 63 KM-VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 121
V EA + ++M + I PN +Y+ +I K G + ++ L DEM RG I
Sbjct: 272 WTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEV 331
Query: 122 YNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF 181
YNS + L + D+ + L+KK+ ++G++PD TYN ++ LC+ G++ A+ V +
Sbjct: 332 YNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMI 391
Query: 182 KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
+ + T++ + + F++ L ++ +M+ + TF I+ LF+ + +
Sbjct: 392 SENLSPTVDTFHAFLEAVN----FEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPE 447
Query: 242 KA 243
A
Sbjct: 448 NA 449
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 102/224 (45%), Gaps = 36/224 (16%)
Query: 10 VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEAL 69
+ PN +Y+ ++ + V + + +++ M + G+ P + Y+ ++ L + +EA+
Sbjct: 290 ITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAM 349
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA- 128
L+K+++ E + P+++TYNS+I LC+ GK+ A +L M + T+++FL+A
Sbjct: 350 KLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAV 409
Query: 129 ------------------------------LCKGHHVDKGIALIKKVIDKGIQPDMCTYN 158
L KG + + + ++ I + Y
Sbjct: 410 NFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYL 469
Query: 159 ILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKE 202
+ GL CG ++ A+E++ ++ KG+ N M+ L +E
Sbjct: 470 ATIQGLLSCGWLEKAREIYSEMKSKGF-----VGNPMLQKLLEE 508
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 118/243 (48%), Gaps = 23/243 (9%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L +M++ V+PNV TY+S++ N ++ + + + + G+ DV S +I+
Sbjct: 149 LLVLMLRDNVRPNVYTYSSVLRS---CNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFA 205
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K+ +AL++ +M + + I +NS+I G + + A EL M G A+
Sbjct: 206 KLGEPEDALSVFDEM----VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQA 261
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQ-----PDMCTYNILLDGLCKCGRIKDAQE 175
T S L A G+AL++ + + D+ N L+D CKCG ++DA
Sbjct: 262 TLTSVLRAC-------TGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALR 314
Query: 176 VFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALF 235
VF + ++ + T++TMI+GL + G EAL L +M+ +G + IT ++ A
Sbjct: 315 VFNQMKER----DVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACS 370
Query: 236 EKG 238
G
Sbjct: 371 HAG 373
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 15/216 (6%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
+++ N+L+D YC + A VFN M + DV+++S MI+GL + EAL L
Sbjct: 292 DLILNNALVDMYCKCGSLEDALRVFNQMKER----DVITWSTMISGLAQNGYSQEALKLF 347
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEM-HVRGQPADIITYNSFLDALCK 131
++M S PN IT ++ G + + W M + G Y +D L K
Sbjct: 348 ERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGK 407
Query: 132 GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL---N 188
+D + L+ ++ +PD T+ LL G C R++ + + KK L +
Sbjct: 408 AGKLDDAVKLLNEM---ECEPDAVTWRTLL-GAC---RVQRNMVLAEYAAKKVIALDPED 460
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDP 224
TY + N +D + ++M D G +P
Sbjct: 461 AGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEP 496
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 13/230 (5%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNE-VNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
+ G+ + TY+ L+ C+ N V++ + + G P + +++IN K
Sbjct: 52 LQSHGLWADSATYSELIKC-CISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFN 110
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
++N+A L QM N I++ ++I K A ELL M ++ TY+
Sbjct: 111 LLNDAHQLFDQMPQR----NVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYS 166
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
S L + C G + L +I +G++ D+ + L+D K G +DA VF ++
Sbjct: 167 SVLRS-CNG--MSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTG 223
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
+ +N++I G + D AL L +M+ G I + T +++ A
Sbjct: 224 ----DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRA 269
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 14/231 (6%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G+KP++VT+NSL+ GY A AV M G+ P S S ++ + +
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAE----PGH 240
Query: 69 LNLLKQMHSEKIIPNTITYN-----SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
L L K +H I+ N + Y+ +LID KTG + A + D M + +I+ +N
Sbjct: 241 LKLGKAIHG-YILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAK----NIVAWN 295
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
S + L + AL+ ++ +GI+PD T+N L G G+ + A +V + +K
Sbjct: 296 SLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEK 355
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
G N ++ + +G K G F AL + KM++ G + T T++ L
Sbjct: 356 GVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKIL 406
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 120/239 (50%), Gaps = 8/239 (3%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
+++ G++ NV NSL+ Y ++ ++ VFN+M ++ S++ +++ K+
Sbjct: 115 VLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKD----RNLSSWNSILSSYTKLGY 170
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V++A+ LL +M + P+ +T+NSL+ G G +A +L M + G + +S
Sbjct: 171 VDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISS 230
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
L A+ + H+ G A+ ++ + D+ L+D K G + A+ VF + K
Sbjct: 231 LLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAK- 289
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
N+ W N++++GL L +A LM +ME G D IT+ ++ S G+ +KA
Sbjct: 290 -NIVAW--NSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKA 345
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 107/245 (43%), Gaps = 34/245 (13%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M K+G+KP+ +T+NSL GY + + KA V M + GV P+V+S++ + +G K
Sbjct: 317 MEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGN 376
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSL---------------IDGLC-KTGKVSNAWELLD 108
AL + +M E + PN T ++L + G C + + +A+
Sbjct: 377 FRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATA 436
Query: 109 EMHVRGQPAD---------------IITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPD 153
+ + G+ D + ++N L ++GIA +++ G++PD
Sbjct: 437 LVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPD 496
Query: 154 MCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY--NTMINGLCKEGLFDEALTL 211
T+ +L G +++ + F DL + Y + + M++ L + G DEA
Sbjct: 497 AITFTSVLSVCKNSGLVQEGWKYF-DLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDF 555
Query: 212 MSKME 216
+ M
Sbjct: 556 IQTMS 560
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 112/255 (43%), Gaps = 43/255 (16%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
+V +L+D Y + A+ VF+ M ++++++ +++GL ++ +A L+
Sbjct: 259 DVYVETTLIDMYIKTGYLPYARMVFDMMDA----KNIVAWNSLVSGLSYACLLKDAEALM 314
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 132
+M E I P+ IT+NSL G GK A +++ +M +G +++++ + K
Sbjct: 315 IRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKN 374
Query: 133 HHVDKGIALIKKVIDKGIQPDMCTYNILLD---------------GLC------------ 165
+ + + K+ ++G+ P+ T + LL G C
Sbjct: 375 GNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVA 434
Query: 166 --------KCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMED 217
K G ++ A E+F + K +L +W N M+ G G +E + S M +
Sbjct: 435 TALVDMYGKSGDLQSAIEIFWGI--KNKSLASW--NCMLMGYAMFGRGEEGIAAFSVMLE 490
Query: 218 NGCIHDPITFETIIS 232
G D ITF +++S
Sbjct: 491 AGMEPDAITFTSVLS 505
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 89/195 (45%), Gaps = 10/195 (5%)
Query: 49 VLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLD 108
V+S S+ G C +L ++ E + + +N ++ ++G A EL
Sbjct: 25 VVSASMGFYGRCV------SLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFR 78
Query: 109 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCG 168
EM G A T L +G + V+ G++ ++ N L+ + G
Sbjct: 79 EMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNG 138
Query: 169 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFE 228
+++ +++VF + K NL++W N++++ K G D+A+ L+ +ME G D +T+
Sbjct: 139 KLELSRKVFNSM--KDRNLSSW--NSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWN 194
Query: 229 TIISALFEKGENDKA 243
+++S KG + A
Sbjct: 195 SLLSGYASKGLSKDA 209
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 116/229 (50%), Gaps = 13/229 (5%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMG-VFPDVLSYSIMINGLCKMKMVNEAL 69
+P+ +N+L+ GY +E + + AVF M + G VFPD S++ +I + + +
Sbjct: 67 EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGF 126
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
+ Q + + +LI G V A ++ DEMH QP +++ +N+ + A
Sbjct: 127 QMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMH---QP-NLVAWNAVITAC 182
Query: 130 CKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 189
+G+ V A +++ DK + + ++N++L G K G ++ A+ +F ++ + ++
Sbjct: 183 FRGNDV----AGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHR----DD 234
Query: 190 WTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
+++TMI G+ G F+E+ +++ G + ++ ++SA + G
Sbjct: 235 VSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSG 283
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 116/239 (48%), Gaps = 16/239 (6%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALN 70
+PN+V +N+++ N+V A+ +F+ M + + S+++M+ G K + A
Sbjct: 169 QPNLVAWNAVITACFRGNDVAGAREIFDKM----LVRNHTSWNVMLAGYIKAGELESA-- 222
Query: 71 LLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 130
K++ SE + ++++++I G+ G + ++ E+ G + ++ L A
Sbjct: 223 --KRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACS 280
Query: 131 KGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 190
+ + G L V G + N L+D +CG + A+ VF+ + +K + +W
Sbjct: 281 QSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEK-RCIVSW 339
Query: 191 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA-----LFEKGENDKAE 244
T +MI GL G +EA+ L ++M G D I+F +++ A L E+GE+ +E
Sbjct: 340 T--SMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSE 396
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 109/221 (49%), Gaps = 14/221 (6%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
+++++N+++DGY E++KA +F M + + +S+S M+ G K + +
Sbjct: 215 DLISWNTMLDGYARCREMSKAFELFEKMPER----NTVSWSTMVMGYSKAG----DMEMA 266
Query: 73 KQMHSEKIIP--NTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 130
+ M + +P N +T+ +I G + G + A L+D+M G D S L A
Sbjct: 267 RVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACT 326
Query: 131 KGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 190
+ + G+ + + + + N LLD KCG +K A +VF D+ KK +L +W
Sbjct: 327 ESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK--DLVSW 384
Query: 191 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 231
NTM++GL G EA+ L S+M G D +TF ++
Sbjct: 385 --NTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVL 423
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 125/268 (46%), Gaps = 51/268 (19%)
Query: 8 QGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMING------LCK 61
Q +PNV NSL+ + ++ +A VF+ M + G+F D +Y ++ L
Sbjct: 76 QVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPV 135
Query: 62 MKM-------------------------------VNEALNLLKQMHSEKIIPNTITYNSL 90
+KM V +A+ L ++M SE+ +T+++NS+
Sbjct: 136 VKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKM-SER---DTVSWNSM 191
Query: 91 IDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGI 150
+ GL K G++ +A L DEM R D+I++N+ LD + + K L +K+ ++
Sbjct: 192 LGGLVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFEKMPER-- 245
Query: 151 QPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALT 210
+ +++ ++ G K G ++ A+ +F + N+ WT +I G ++GL EA
Sbjct: 246 --NTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWT--IIIAGYAEKGLLKEADR 301
Query: 211 LMSKMEDNGCIHDPITFETIISALFEKG 238
L+ +M +G D +I++A E G
Sbjct: 302 LVDQMVASGLKFDAAAVISILAACTESG 329
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 95/205 (46%), Gaps = 7/205 (3%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
NVVT+ ++ GY + +A + + M G+ D + ++ + +++ + +
Sbjct: 279 NVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIH 338
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 132
+ + N N+L+D K G + A+++ +++ + D++++N+ L L
Sbjct: 339 SILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK----DLVSWNTMLHGLGVH 394
Query: 133 HHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT- 191
H + I L ++ +GI+PD T+ +L G I + + F + +K Y+L
Sbjct: 395 GHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSM-EKVYDLVPQVE 453
Query: 192 -YNTMINGLCKEGLFDEALTLMSKM 215
Y +++ L + G EA+ ++ M
Sbjct: 454 HYGCLVDLLGRVGRLKEAIKVVQTM 478
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 86/185 (46%), Gaps = 16/185 (8%)
Query: 3 AVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKM 62
+++ + + N N+L+D Y + KA VFN + + D++S++ M++GL
Sbjct: 339 SILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPK----KDLVSWNTMLHGLGVH 394
Query: 63 KMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT- 121
EA+ L +M E I P+ +T+ I LC E +D + + D++
Sbjct: 395 GHGKEAIELFSRMRREGIRPDKVTF---IAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQ 451
Query: 122 ---YNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKD-AQEVF 177
Y +D L + + + I +++ + ++P++ + LL G C+ D A+EV
Sbjct: 452 VEHYGCLVDLLGRVGRLKEAIKVVQTM---PMEPNVVIWGALL-GACRMHNEVDIAKEVL 507
Query: 178 QDLFK 182
+L K
Sbjct: 508 DNLVK 512
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 85.5 bits (210), Expect = 3e-17, Method: Composition-based stats.
Identities = 52/224 (23%), Positives = 100/224 (44%), Gaps = 2/224 (0%)
Query: 10 VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEAL 69
+ P + T+N LM ++ A+ V + + G+ D Y+ +I+ K V+
Sbjct: 463 LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMF 522
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
+ QM + + N T+ +LIDG + G+V+ A+ + + D + +N+ + A
Sbjct: 523 EVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISAC 582
Query: 130 CKGHHVDKGIALIK--KVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
+ VD+ ++ K I PD + L+ C G+++ A+EV+Q + K G
Sbjct: 583 GQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRG 642
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 231
Y +N K G +D A ++ M++ D + F +I
Sbjct: 643 TPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALI 686
Score = 79.3 bits (194), Expect = 2e-15, Method: Composition-based stats.
Identities = 52/232 (22%), Positives = 108/232 (46%), Gaps = 3/232 (1%)
Query: 10 VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEAL 69
+ P+ ++ +LM C +V +A+ V+ + + G+ Y+I +N K + A
Sbjct: 605 IDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFAC 664
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
++ K M + + P+ + +++LID + A+ +L + +G I+Y+S + A
Sbjct: 665 SIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGAC 724
Query: 130 CKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 189
C K + L +K+ ++P + T N L+ LC+ ++ A E ++ G N
Sbjct: 725 CNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNT 784
Query: 190 WTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL---FEKG 238
TY+ ++ ++ F+ + L+S+ + +G + I I S FEK
Sbjct: 785 ITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRCITSLCKRRFEKA 836
Score = 73.9 bits (180), Expect = 8e-14, Method: Composition-based stats.
Identities = 47/235 (20%), Positives = 109/235 (46%), Gaps = 2/235 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L ++ + G+ + Y +L+ +V+ VF+ M+ GV ++ ++ +I+G
Sbjct: 489 VLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCA 548
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQP--AD 118
+ V +A + S+ + P+ + +N+LI ++G V A+++L EM P D
Sbjct: 549 RAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPD 608
Query: 119 IITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 178
I+ + + A C V++ + + + GI+ Y I ++ K G A +++
Sbjct: 609 HISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYK 668
Query: 179 DLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
D+ +K + ++ +I+ + DEA ++ + G I++ +++ A
Sbjct: 669 DMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGA 723
Score = 72.4 bits (176), Expect = 3e-13, Method: Composition-based stats.
Identities = 54/266 (20%), Positives = 112/266 (42%), Gaps = 37/266 (13%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M GV+ N+ T+ +L+DG +V KA + + V PD + ++ +I+ +
Sbjct: 528 MSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGA 587
Query: 65 VNEALNLLKQMHSEK--IIPNTITYNSLIDGLCKTGKVSNAWELLDEMH---VRGQP--- 116
V+ A ++L +M +E I P+ I+ +L+ C G+V A E+ +H +RG P
Sbjct: 588 VDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVY 647
Query: 117 -----------------------------ADIITYNSFLDALCKGHHVDKGIALIKKVID 147
D + +++ +D +D+ +++
Sbjct: 648 TIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKS 707
Query: 148 KGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDE 207
+GI+ +Y+ L+ C K A E+++ + T N +I LC+ +
Sbjct: 708 QGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPK 767
Query: 208 ALTLMSKMEDNGCIHDPITFETIISA 233
A+ + +++ G + IT+ ++ A
Sbjct: 768 AMEYLDEIKTLGLKPNTITYSMLMLA 793
Score = 65.9 bits (159), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 8/163 (4%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M ++ V P+ V +++L+D +++A + G+ +SYS ++ C K
Sbjct: 670 MKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKD 729
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+AL L +++ S K+ P T N+LI LC+ ++ A E LDE+ G + ITY+
Sbjct: 730 WKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSM 789
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKC 167
+ A + + L+ + G+ P++ +C+C
Sbjct: 790 LMLASERKDDFEVSFKLLSQAKGDGVSPNLI--------MCRC 824
Score = 47.8 bits (112), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 50/123 (40%)
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
T+N + ++ +++ V + G+ D Y L+ K G++ EVF +
Sbjct: 469 TFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQM 528
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
G N T+ +I+G + G +A + D + F +ISA + G
Sbjct: 529 SNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAV 588
Query: 241 DKA 243
D+A
Sbjct: 589 DRA 591
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 109/231 (47%), Gaps = 12/231 (5%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALN 70
K +++ +N L++GYC +++ A +F +M + + S+S +I G +N A
Sbjct: 193 KESILIWNVLINGYCRAKDMHMATTLFRSMPER----NSGSWSTLIKGYVDSGELNRAKQ 248
Query: 71 LLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 130
L + M EK N +++ +LI+G +TG A EM +G + T + L A
Sbjct: 249 LFELM-PEK---NVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACS 304
Query: 131 KGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 190
K + GI + ++D GI+ D L+D KCG + A VF ++ K ++ +W
Sbjct: 305 KSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHK--DILSW 362
Query: 191 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
T MI G G F +A+ +M +G D + F +++A E D
Sbjct: 363 T--AMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVD 411
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/270 (19%), Positives = 110/270 (40%), Gaps = 35/270 (12%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKM-- 62
+ + + N N+L+ G + F M ++GV PD L++ ++ K+
Sbjct: 82 IFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGF 141
Query: 63 KMVNEALNL--LKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ + AL+ LK + ++ SL+D KTG++ +A+++ +E R + I+
Sbjct: 142 RWLGRALHAATLKNF----VDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESIL 197
Query: 121 TYNSFLDALCKGHHVDKGIAL---------------IKKVIDKG----------IQPD-- 153
+N ++ C+ + L IK +D G + P+
Sbjct: 198 IWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKN 257
Query: 154 MCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMS 213
+ ++ L++G + G + A + ++ +KG N +T +++ K G + +
Sbjct: 258 VVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHG 317
Query: 214 KMEDNGCIHDPITFETIISALFEKGENDKA 243
+ DNG D ++ + GE D A
Sbjct: 318 YILDNGIKLDRAIGTALVDMYAKCGELDCA 347
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 101/196 (51%), Gaps = 5/196 (2%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
+ +K+ +KP+ +TY +++ G+C V ++ +A ++N M G D+ + ++ L K
Sbjct: 205 IKLKEFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKN 264
Query: 64 MVNEALNLLKQMHSEKIIP-NTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 122
+EA + M S++ + Y +ID LCK G++ A ++ DEM RG D +T+
Sbjct: 265 QFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTW 324
Query: 123 NSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 182
S + L V + L++ V + PD+ Y+ L+ GL K R +A EVF+ + +
Sbjct: 325 ASLIYGLLVKRRVVEAYGLVEGVEN----PDISIYHGLIKGLVKIKRASEATEVFRKMIQ 380
Query: 183 KGYNLNNWTYNTMING 198
+G TY ++ G
Sbjct: 381 RGCEPIMHTYLMLLQG 396
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 2/203 (0%)
Query: 16 TYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQM 75
T+ ++ E+ K F+ M G +V + + + LCK K+V EA + ++
Sbjct: 148 TFRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKL 207
Query: 76 HSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHV 135
E I P+ ITY ++I G C G + A +L + M G DI ++ L K +
Sbjct: 208 -KEFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQF 266
Query: 136 DKGIALIKKVIDK-GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 194
D+ + ++ K G D Y +++D LCK GRI A++VF ++ ++G ++N T+ +
Sbjct: 267 DEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWAS 326
Query: 195 MINGLCKEGLFDEALTLMSKMED 217
+I GL + EA L+ +E+
Sbjct: 327 LIYGLLVKRRVVEAYGLVEGVEN 349
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 2/173 (1%)
Query: 71 LLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 130
L Q H + T N ++ + + + WEL E+ RG D T+ L L
Sbjct: 99 LYSQTHHPDFTHTSTTSNKMLAIIGNSRNMDLFWELAQEIGKRGLVNDK-TFRIVLKTLA 157
Query: 131 KGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 190
+ K + + G ++ T N ++ LCK +++A+ VF L K+ +
Sbjct: 158 SARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKL-KEFIKPDEI 216
Query: 191 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
TY TMI G C G EA L + M D G D + I+ L +K + D+A
Sbjct: 217 TYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEA 269
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 104/225 (46%), Gaps = 1/225 (0%)
Query: 20 LMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHS-E 78
L+D C + +A + + + +G +Y+I I L K +N + L+++ E
Sbjct: 292 LVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLE 351
Query: 79 KIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKG 138
YNS++ L K + +++L EM VRG + T N+ L CK VD+
Sbjct: 352 GCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEA 411
Query: 139 IALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMING 198
+ L + + G P +YN L+ LC ++ A +V + +G+ L T++T+ N
Sbjct: 412 LELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNA 471
Query: 199 LCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
LC +G D A L+ + + I IISAL + G+ + A
Sbjct: 472 LCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDA 516
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 109/232 (46%), Gaps = 1/232 (0%)
Query: 14 VVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLK 73
VT++ L+ +C ++++A+ + I+++ LC + EA LL
Sbjct: 251 AVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLD 310
Query: 74 QMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMH-VRGQPADIITYNSFLDALCKG 132
++ + YN I L K G ++N + L ++ + G ++ YNS + L K
Sbjct: 311 EIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKE 370
Query: 133 HHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 192
+++D ++ +++ +G+ P+ T N L CK G + +A E+++ + G+ +Y
Sbjct: 371 NNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSY 430
Query: 193 NTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
N +I+ LC ++A ++ D G TF T+ +AL KG+ D A
Sbjct: 431 NYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMAR 482
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 106/238 (44%), Gaps = 6/238 (2%)
Query: 8 QGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQM---GVFPDVLSYSIMINGLCKMKM 64
+G + V YNS++ + L+ E N V++ +T+M GV P+ + + + CK
Sbjct: 351 EGCELEVFRYNSMV--FQLLKE-NNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGF 407
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V+EAL L + P ++YN LI LC V A+++L RG T+++
Sbjct: 408 VDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFST 467
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ALC D L+ ++ + P ++ LC G+++DA + + K G
Sbjct: 468 LTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSG 527
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 242
+ + + ++I G D A L+ +M++ G + +I + E +K
Sbjct: 528 VDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEK 585
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 90/201 (44%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L MM +GV PN T N+ + +C V++A ++ + +++G P +SY+ +I+ LC
Sbjct: 379 ILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLC 438
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ V +A ++LK T+++L + LC GK A EL+ R I
Sbjct: 439 ANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRI 498
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
+ ALC V+ + + + G+ + L+ G R A ++ +
Sbjct: 499 AGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRM 558
Query: 181 FKKGYNLNNWTYNTMINGLCK 201
+KGY Y +I +C+
Sbjct: 559 QEKGYTPTRSLYRNVIQCVCE 579
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 7/196 (3%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
+M + G+ P V + ++ Y ++ A F+ + + G L Y +MI GLCK
Sbjct: 628 MMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQGKTKKRL-YQVMIVGLCKAN 686
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
+++A++ L++M E + P+ Y I LC K A L++E G+ N
Sbjct: 687 KLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRRITAFIGN 746
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV--FQDLF 181
L K V + ++ + DK P+M + L+ GL GRI E+ ++
Sbjct: 747 VLLHNAMKSKGVYEAWTRMRNIEDK--IPEMKSLGELI-GLFS-GRIDMEVELKRLDEVI 802
Query: 182 KKGYNLNNWTYNTMIN 197
+K Y L+ +TYN ++
Sbjct: 803 EKCYPLDMYTYNMLLR 818
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 101/236 (42%), Gaps = 8/236 (3%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNL 71
P + ++ C V +V A + + GV ++ +I G + + A L
Sbjct: 495 PKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKL 554
Query: 72 LKQMHSEKIIPNTITYNSLIDGLCK--TGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
+ +M + P Y ++I +C+ +G+ N + L + + + YN F++
Sbjct: 555 IIRMQEKGYTPTRSLYRNVIQCVCEMESGE-KNFFTTLLKFQLSLWEHKVQAYNLFIEG- 612
Query: 130 CKGHHVDKGIA-LIKKVIDK-GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
G +A L+ ++D+ GI P + + ++L K +I DA F DL ++G
Sbjct: 613 -AGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQG-KT 670
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
Y MI GLCK D+A+ + +M+ G +E I L + + D+A
Sbjct: 671 KKRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEA 726
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/220 (19%), Positives = 94/220 (42%), Gaps = 6/220 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMT--QMGVFP-DVLSYSIMIN 57
++ M ++G P Y +++ C + K F T+ Q+ ++ V +Y++ I
Sbjct: 554 LIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKN--FFTTLLKFQLSLWEHKVQAYNLFIE 611
Query: 58 GLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPA 117
G A + M + I P + ++ K K+++A ++ +G+
Sbjct: 612 GAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQGKTK 671
Query: 118 DIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVF 177
+ Y + LCK + +D + ++++ +G+QP + Y + + LC + +A +
Sbjct: 672 KRL-YQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLV 730
Query: 178 QDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMED 217
+ K G + + N +++ K EA T M +ED
Sbjct: 731 NEFRKSGRRITAFIGNVLLHNAMKSKGVYEAWTRMRNIED 770
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 90/218 (41%), Gaps = 10/218 (4%)
Query: 7 KQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM-- 64
K GV + + SL+ G + + A + M + G P Y +I +C+M+
Sbjct: 525 KSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGE 584
Query: 65 VNEALNLLK---QMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 121
N LLK + K+ YN I+G GK A + D M G + +
Sbjct: 585 KNFFTTLLKFQLSLWEHKVQ----AYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVAS 640
Query: 122 YNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF 181
L + K + + + ++G + Y +++ GLCK ++ DA +++
Sbjct: 641 NILMLQSYLKNEKIADALHFFHDLREQG-KTKKRLYQVMIVGLCKANKLDDAMHFLEEMK 699
Query: 182 KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 219
+G + Y I LC E +DEA+ L+++ +G
Sbjct: 700 GEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSG 737
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 94/183 (51%), Gaps = 5/183 (2%)
Query: 7 KQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVN 66
++G+KP ++ ++ C + V A+A+ M G P ++++++ K ++
Sbjct: 369 RRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLD 424
Query: 67 EALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 126
EA +LK M S + P+ TY +I G K G + A E+L E + + +TY++ +
Sbjct: 425 EAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALI 484
Query: 127 DALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLC-KCGRIKDAQEVFQDLFKKGY 185
CK D+ + L+ ++ G+QP+ YN L+ C K + A+ +F+++ +KG
Sbjct: 485 RGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGL 544
Query: 186 NLN 188
+LN
Sbjct: 545 HLN 547
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 110/232 (47%), Gaps = 3/232 (1%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFN-TMTQMGVFPDVLSYSIMINGLCKMK 63
M+K GV +++ +C + +A +V+ T+ P + +I LCK
Sbjct: 292 MLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRF-VATLITALCKND 350
Query: 64 -MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 122
+ A +L + E ++ +I LC+ V +A LL +M +G +
Sbjct: 351 GTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVF 410
Query: 123 NSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 182
N + A K +D+ ++K + +G++PD+ TY +++ G K G + +AQE+ + K
Sbjct: 411 NLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKK 470
Query: 183 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
K L+ TY+ +I G CK +DEAL L+++M+ G + + +I +
Sbjct: 471 KHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSF 522
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 113/267 (42%), Gaps = 36/267 (13%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
N+ N L+ + + + A VF+ + G P+ +Y + + LCK ++ A ++
Sbjct: 230 NLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVC 289
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAW---------------------------- 104
++M ++ ++I CK GK A+
Sbjct: 290 EKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKN 349
Query: 105 --------ELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCT 156
E+L ++ + I ++ + +LC+ +V AL+ +I KG P
Sbjct: 350 DGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAV 409
Query: 157 YNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKME 216
+N+++ K G + +A+EV + + +G + +TY +I+G K G+ DEA ++++ +
Sbjct: 410 FNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAK 469
Query: 217 DNGCIHDPITFETIISALFEKGENDKA 243
P+T+ +I + E D+A
Sbjct: 470 KKHKKLSPVTYHALIRGYCKIEEYDEA 496
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 78/152 (51%), Gaps = 1/152 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M+ +G P +N ++ ++++A+ V M G+ PDV +Y+++I+G
Sbjct: 394 LLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYA 453
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K M++EA +L + + + +TY++LI G CK + A +LL+EM G +
Sbjct: 454 KGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNAD 513
Query: 121 TYNSFLDALC-KGHHVDKGIALIKKVIDKGIQ 151
YN + + C K +K L +++ KG+
Sbjct: 514 EYNKLIQSFCLKALDWEKAEVLFEEMKQKGLH 545
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 84/168 (50%)
Query: 30 VNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNS 89
++ +++ M GV PD +++I K V+EA+ + K+M PN TY+
Sbjct: 204 LHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSY 263
Query: 90 LIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKG 149
L+ G+C+ G+V EM V+G + Y + +L +D+ + ++ ++
Sbjct: 264 LVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANS 323
Query: 150 IQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMIN 197
+ PDM TYN +L LC+ GR +A E+ ++ K+ + Y T+++
Sbjct: 324 LSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMD 371
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 82/166 (49%)
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
+L KQM S +IP+T N +I K +V A + EM + G + TY+ + +
Sbjct: 209 SLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGV 268
Query: 130 CKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 189
C+ V +G+ K++ KG+ P+ Y +L+ L R+ +A EV D+ + +
Sbjct: 269 CEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDM 328
Query: 190 WTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALF 235
TYNT++ LC+ G EAL ++ + + + + T++ ++
Sbjct: 329 LTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMDEVY 374
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M GV P+ N ++ Y EV++A VF M G P+ +YS ++ G+C+
Sbjct: 214 MKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGR 273
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V + L K+M + ++PN Y LI L ++ A E++ +M D++TYN+
Sbjct: 274 VGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNT 333
Query: 125 FLDALCKGHHVDKGIALIKK 144
L LC+G + + ++++
Sbjct: 334 VLTELCRGGRGSEALEMVEE 353
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
G +PN TY+ L+ G C V + + M G+ P+ Y ++I L + ++EA
Sbjct: 253 GSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEA 312
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
+ ++ M + + P+ +TYN+++ LC+ G+ S A E+++E R Y + +D
Sbjct: 313 VEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMDE 372
Query: 129 LCKGHHVDKG 138
+ + ++KG
Sbjct: 373 V---YFLNKG 379
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%)
Query: 106 LLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLC 165
L +M G D N + A K VD+ I + K++ G +P+ TY+ L+ G+C
Sbjct: 210 LTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVC 269
Query: 166 KCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPI 225
+ GR+ ++++ KG N Y +I L E DEA+ ++ M N D +
Sbjct: 270 EKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDML 329
Query: 226 TFETIISALFEKGENDKA 243
T+ T+++ L G +A
Sbjct: 330 TYNTVLTELCRGGRGSEA 347
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 80/149 (53%), Gaps = 3/149 (2%)
Query: 71 LLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 130
+ K+M +IPN + +++DGLCK G V A +L M +G +++ Y + ++A C
Sbjct: 121 IFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC 177
Query: 131 KGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 190
K H ++ + +K+ + GI P+ +Y +L+ GL C + DA ++ + G++ N
Sbjct: 178 KAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVP 237
Query: 191 TYNTMINGLCKEGLFDEALTLMSKMEDNG 219
T+ +++ LC+ ++A + + + G
Sbjct: 238 TFVELVDALCRVKGVEQAQSAIDTLNQKG 266
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 80/153 (52%), Gaps = 3/153 (1%)
Query: 36 VFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLC 95
+F M + G+ P+ ++ M++GLCK +V EA+ L M + IP + Y ++++ C
Sbjct: 121 IFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC 177
Query: 96 KTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMC 155
K K+ +A + +M G + +Y + L + +D +A ++++ G P++
Sbjct: 178 KAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVP 237
Query: 156 TYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
T+ L+D LC+ ++ AQ L +KG+ +N
Sbjct: 238 TFVELVDALCRVKGVEQAQSAIDTLNQKGFAVN 270
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 65/127 (51%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ +M +G P VV Y ++++ +C +++ A+ +F M G+ P+ SY +++ GL
Sbjct: 153 LFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLY 212
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
M+++A+ +M PN T+ L+D LC+ V A +D ++ +G ++
Sbjct: 213 NCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVK 272
Query: 121 TYNSFLD 127
F+D
Sbjct: 273 AVKEFMD 279
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 71/146 (48%), Gaps = 3/146 (2%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M + G+ PN V +++DG C V +A +F M G P+V+ Y+ ++ CK
Sbjct: 125 MKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHK 181
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ +A + ++M + I PN +Y L+ GL + +A EM G ++ T+
Sbjct: 182 IEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVE 241
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGI 150
+DALC+ V++ + I + KG
Sbjct: 242 LVDALCRVKGVEQAQSAIDTLNQKGF 267
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 60/111 (54%)
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ LD LCK V + + L + DKG P++ Y +++ CK +I+DA+ +F+ +
Sbjct: 136 AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNN 195
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
G N ++Y ++ GL + D+A+ S+M ++G + TF ++ AL
Sbjct: 196 GIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDAL 246
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 80/149 (53%), Gaps = 3/149 (2%)
Query: 71 LLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 130
+ K+M +IPN + +++DGLCK G V A +L M +G +++ Y + ++A C
Sbjct: 121 IFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC 177
Query: 131 KGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 190
K H ++ + +K+ + GI P+ +Y +L+ GL C + DA ++ + G++ N
Sbjct: 178 KAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVP 237
Query: 191 TYNTMINGLCKEGLFDEALTLMSKMEDNG 219
T+ +++ LC+ ++A + + + G
Sbjct: 238 TFVELVDALCRVKGVEQAQSAIDTLNQKG 266
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 80/153 (52%), Gaps = 3/153 (1%)
Query: 36 VFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLC 95
+F M + G+ P+ ++ M++GLCK +V EA+ L M + IP + Y ++++ C
Sbjct: 121 IFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC 177
Query: 96 KTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMC 155
K K+ +A + +M G + +Y + L + +D +A ++++ G P++
Sbjct: 178 KAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVP 237
Query: 156 TYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
T+ L+D LC+ ++ AQ L +KG+ +N
Sbjct: 238 TFVELVDALCRVKGVEQAQSAIDTLNQKGFAVN 270
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 65/127 (51%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ +M +G P VV Y ++++ +C +++ A+ +F M G+ P+ SY +++ GL
Sbjct: 153 LFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLY 212
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
M+++A+ +M PN T+ L+D LC+ V A +D ++ +G ++
Sbjct: 213 NCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVK 272
Query: 121 TYNSFLD 127
F+D
Sbjct: 273 AVKEFMD 279
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 71/146 (48%), Gaps = 3/146 (2%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M + G+ PN V +++DG C V +A +F M G P+V+ Y+ ++ CK
Sbjct: 125 MKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHK 181
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ +A + ++M + I PN +Y L+ GL + +A EM G ++ T+
Sbjct: 182 IEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVE 241
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGI 150
+DALC+ V++ + I + KG
Sbjct: 242 LVDALCRVKGVEQAQSAIDTLNQKGF 267
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 60/111 (54%)
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ LD LCK V + + L + DKG P++ Y +++ CK +I+DA+ +F+ +
Sbjct: 136 AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNN 195
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 234
G N ++Y ++ GL + D+A+ S+M ++G + TF ++ AL
Sbjct: 196 GIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDAL 246
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 113/235 (48%), Gaps = 14/235 (5%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALN 70
+P++ N+L++ Y E++ A +F +M DV+S++ ++ G + + A
Sbjct: 268 EPSLRLENALVNAYAACGEMDIAVRIFRSMKAR----DVISWTSIVKGYVERGNLKLART 323
Query: 71 LLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 130
QM + + I++ +IDG + G + + E+ EM G D T S L A
Sbjct: 324 YFDQMP----VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACA 379
Query: 131 KGHHVDKGIALIKKVIDKG-IQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 189
++ G IK IDK I+ D+ N L+D KCG + AQ+VF D+ ++ +
Sbjct: 380 HLGSLEIG-EWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR----DK 434
Query: 190 WTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+T+ M+ GL G EA+ + +M+D D IT+ ++SA G D+A
Sbjct: 435 FTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQAR 489
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 116/234 (49%), Gaps = 22/234 (9%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
++K G+ N+ N+L+ Y L ++ A+ VF+ + DV S+++MI+G +MK
Sbjct: 161 VVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCK----EDVFSWNLMISGYNRMKE 216
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMH-----VRGQPADI 119
E++ LL +M + P ++T L+ L KV + +L +H + +P+ +
Sbjct: 217 YEESIELLVEMERNLVSPTSVT---LLLVLSACSKVKDK-DLCKRVHEYVSECKTEPS-L 271
Query: 120 ITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
N+ ++A +D + + + + + D+ ++ ++ G + G +K A+ F
Sbjct: 272 RLENALVNAYAACGEMDIAVRIFRSMKAR----DVISWTSIVKGYVERGNLKLARTYFDQ 327
Query: 180 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
+ + + ++ MI+G + G F+E+L + +M+ G I D T ++++A
Sbjct: 328 MPVR----DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTA 377
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 114/249 (45%), Gaps = 25/249 (10%)
Query: 2 LAVMMKQGVKP-NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+AV + + +K +V+++ S++ GY + A+ F+ M D +S++IMI+G
Sbjct: 289 IAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMP----VRDRISWTIMIDGYL 344
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVS-NAW--ELLDEMHVRGQPA 117
+ NE+L + ++M S +IP+ T S++ G + W +D+ ++
Sbjct: 345 RAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKN--- 401
Query: 118 DIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVF 177
D++ N+ +D K +K +KV Q D T+ ++ GL G+ ++A +VF
Sbjct: 402 DVVVGNALIDMYFKCGCSEKA----QKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVF 457
Query: 178 QDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDN----------GCIHDPITF 227
+ ++ TY +++ G+ D+A +KM + GC+ D +
Sbjct: 458 FQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGR 517
Query: 228 ETIISALFE 236
++ +E
Sbjct: 518 AGLVKEAYE 526
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 10/157 (6%)
Query: 7 KQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVN 66
K +K +VV N+L+D Y KAQ VF+ M Q D +++ M+ GL
Sbjct: 396 KNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR----DKFTWTAMVVGLANNGQGQ 451
Query: 67 EALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHV--RGQPADIITYNS 124
EA+ + QM I P+ ITY ++ +G V A + +M R +P+ ++ Y
Sbjct: 452 EAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPS-LVHYGC 510
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILL 161
+D L + V + +++K+ + P+ + LL
Sbjct: 511 MVDMLGRAGLVKEAYEILRKM---PMNPNSIVWGALL 544
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 48/221 (21%)
Query: 51 SYSIMINGLCKMKMVNEALNLLKQMHSEKII----PNTITYNSLIDGLCKT--GKVSNAW 104
S I I G+CK + KQ+HS+ I PN L C G VS A+
Sbjct: 35 SRFISILGVCK------TTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAY 88
Query: 105 ELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGL 164
+L V+ D++ +N+ + K +G+ L ++ +G+ PD T+ LL+GL
Sbjct: 89 KLF----VKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGL 144
Query: 165 CK------CGRIKDAQEV---------FQDLFKKGYNL-----------------NNWTY 192
+ CG+ V Q+ K Y+L + +++
Sbjct: 145 KRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSW 204
Query: 193 NTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
N MI+G + ++E++ L+ +ME N +T ++SA
Sbjct: 205 NLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSA 245
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 120/240 (50%), Gaps = 1/240 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+K GV+ + +TY++++ N NKA F M + G+ PD ++YS +++ K
Sbjct: 212 MVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGK 271
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V E L+L ++ + P+ I ++ L + G +L EM +++ YN+
Sbjct: 272 VEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNT 331
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
L+A+ + +L ++++ G+ P+ T L+ K +DA ++++++ K
Sbjct: 332 LLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKK 391
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDN-GCIHDPITFETIISALFEKGENDKA 243
+ ++ YNT++N GL +EA L + M+++ C D ++ +++ G+ +KA
Sbjct: 392 WPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKA 451
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 94/186 (50%), Gaps = 3/186 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M VKPNVV YN+L++ + A+++FN M + G+ P+ + + ++
Sbjct: 313 VLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYG 372
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEM--HVRGQPAD 118
K + +AL L ++M ++K + I YN+L++ G A L ++M V+ +P D
Sbjct: 373 KARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRP-D 431
Query: 119 IITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 178
+Y + L+ G +K + L ++++ G+Q ++ L+ L K RI D VF
Sbjct: 432 NFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFD 491
Query: 179 DLFKKG 184
K+G
Sbjct: 492 LSIKRG 497
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 106/231 (45%)
Query: 14 VVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLK 73
+ YN M + + + M + GV D ++YS +I + + N+A+ +
Sbjct: 186 TIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFE 245
Query: 74 QMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGH 133
+M+ ++P+ +TY++++D K+GKV L + G D I ++ +
Sbjct: 246 RMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAG 305
Query: 134 HVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYN 193
D +++++ ++P++ YN LL+ + + G+ A+ +F ++ + G N T
Sbjct: 306 DYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLT 365
Query: 194 TMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
++ K +AL L +M+ D I + T+++ + G ++AE
Sbjct: 366 ALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAE 416
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 102/227 (44%), Gaps = 50/227 (22%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M K G+ P+ VTY++++D Y +V + +++ G PD +++S++ KM
Sbjct: 247 MYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVL------GKM 300
Query: 65 VNEALN------LLKQMHSEKIIPNTITYNSLIDGLCKTGK------------------- 99
EA + +L++M S + PN + YN+L++ + + GK
Sbjct: 301 FGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPN 360
Query: 100 ----------------VSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIK 143
+A +L +EM + P D I YN+ L+ +C +++ +
Sbjct: 361 EKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLN-MCADIGLEEEAERLF 419
Query: 144 KVIDKGIQ--PDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
+ + +Q PD +Y +L+ G+ + A E+F+++ K G +N
Sbjct: 420 NDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVN 466
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 56/126 (44%)
Query: 116 PADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQE 175
P + I YN + +L G + +++ G++ D TY+ ++ +C A E
Sbjct: 183 PMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIE 242
Query: 176 VFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALF 235
F+ ++K G + TY+ +++ K G +E L+L + G D I F +
Sbjct: 243 WFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFG 302
Query: 236 EKGEND 241
E G+ D
Sbjct: 303 EAGDYD 308
>AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16811051-16812106 FORWARD
LENGTH=351
Length = 351
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 86/162 (53%)
Query: 44 GVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNA 103
G F +Y I+I+ LCK+ +++AL ++ M + ++ TY+ ++ L + K+ A
Sbjct: 102 GGFSRKNAYDILISRLCKLGRIDDALIVIGDMSNGRLGLTPSTYHPILCSLTRKYKIEEA 161
Query: 104 WELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDG 163
W +++ M + D+ YN FL + C ++ +++K+ + G PD +Y+ L+ G
Sbjct: 162 WRVVESMRSKSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPDSRSYDALVLG 221
Query: 164 LCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLF 205
C+ G+++ A + + + + G + T+ +I GL + G +
Sbjct: 222 ACRAGKVEAAMAILRRMEEDGVTVLYSTHAHVITGLVEGGYY 263
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 101/219 (46%), Gaps = 8/219 (3%)
Query: 26 LVNEVNKA------QAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEK 79
L+NE + + + N +G F ++ + N + + +L Q+
Sbjct: 45 LINEAGSSGDFETVRRLLNNRIVLGSFNTSDTFKFLTNTASYSSYLEDLRRVLPQIDGGF 104
Query: 80 IIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGI 139
N Y+ LI LCK G++ +A ++ +M TY+ L +L + + +++
Sbjct: 105 SRKNA--YDILISRLCKLGRIDDALIVIGDMSNGRLGLTPSTYHPILCSLTRKYKIEEAW 162
Query: 140 ALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGL 199
+++ + K + D+ YN L C G ++ A EV + + + G + ++ +Y+ ++ G
Sbjct: 163 RVVESMRSKSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPDSRSYDALVLGA 222
Query: 200 CKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
C+ G + A+ ++ +ME++G T +I+ L E G
Sbjct: 223 CRAGKVEAAMAILRRMEEDGVTVLYSTHAHVITGLVEGG 261
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 84/183 (45%), Gaps = 2/183 (1%)
Query: 7 KQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVN 66
+ G+ P+ TY+ ++ ++ +A V +M V DV +Y+ + C +
Sbjct: 137 RLGLTPS--TYHPILCSLTRKYKIEEAWRVVESMRSKSVSMDVTAYNYFLTSHCYDGELE 194
Query: 67 EALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 126
A +++++ + P++ +Y++L+ G C+ GKV A +L M G T+ +
Sbjct: 195 SASEVMRKIEEDGNSPDSRSYDALVLGACRAGKVEAAMAILRRMEEDGVTVLYSTHAHVI 254
Query: 127 DALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 186
L +G + G+ + K ++ D ++ L L K R ++A V +++ +G
Sbjct: 255 TGLVEGGYYALGLEFVMAYAGKDLRLDSESFGFLAGKLVKRKRYEEAMIVVKEMVMRGLR 314
Query: 187 LNN 189
+ +
Sbjct: 315 MGD 317
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 66/147 (44%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M + V +V YN + +C E+ A V + + G PD SY ++ G C+
Sbjct: 168 MRSKSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPDSRSYDALVLGACRAGK 227
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
V A+ +L++M + + T+ +I GL + G + E + + D ++
Sbjct: 228 VEAAMAILRRMEEDGVTVLYSTHAHVITGLVEGGYYALGLEFVMAYAGKDLRLDSESFGF 287
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQ 151
L K ++ + ++K+++ +G++
Sbjct: 288 LAGKLVKRKRYEEAMIVVKEMVMRGLR 314
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 9/185 (4%)
Query: 45 VFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAW 104
+FPD ++I+G C + ++EA L +M T YN ++D +CK + + +
Sbjct: 241 IFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPF 300
Query: 105 EL-------LDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTY 157
+L L EM RG P + T+N ++ LCK ++ + L ++ + G QPD TY
Sbjct: 301 KLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETY 360
Query: 158 NILLDGLCKCGRIKDAQEVFQDLFKKGYN--LNNWTYNTMINGLCKEGLFDEALTLMSKM 215
+L+ L + RI + E+ + GY LN Y + LC + A+++ M
Sbjct: 361 LVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSM 420
Query: 216 EDNGC 220
+ NGC
Sbjct: 421 KANGC 425
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 15/201 (7%)
Query: 5 MMKQGVKPNVVTYNSLMDGYC----------LVNEVNKAQAVFNTMTQMGVFPDVLSYSI 54
M + G + YN ++D C L EV K V M GV + ++++
Sbjct: 271 MSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEK---VLLEMEFRGVPRNTETFNV 327
Query: 55 MINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVR- 113
+IN LCK++ EA+ L +M P+ TY LI L + ++ E++D+M
Sbjct: 328 LINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAG 387
Query: 114 -GQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKD 172
G+ + Y FL LC ++ +++ K + G +P + TY++L+ +C ++
Sbjct: 388 YGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTR 447
Query: 173 AQEVFQDLFKKGYNLNNWTYN 193
A ++++ KKG ++ Y
Sbjct: 448 ANGLYKEAAKKGIAVSPKEYR 468
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 93/218 (42%), Gaps = 9/218 (4%)
Query: 20 LMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKM-------KMVNEALNLL 72
L+ G+C+ ++++A + M++ G +Y++M++ +CK+ K+ E +L
Sbjct: 251 LISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVL 310
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 132
+M + NT T+N LI+ LCK + A L M G D TY + +L +
Sbjct: 311 LEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQA 370
Query: 133 HHVDKGIALIKKVIDKGIQP--DMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 190
+ +G +I K+ G + Y L LC R++ A VF+ + G
Sbjct: 371 ARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIK 430
Query: 191 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFE 228
TY+ ++ +C A L + G P +
Sbjct: 431 TYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEYR 468
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 2/161 (1%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M +GV N T+N L++ C + +A +F M + G PD +Y ++I L
Sbjct: 309 VLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLY 368
Query: 61 KMKMVNEALNLLKQMHSEKI--IPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPAD 118
+ + E ++ +M S + N Y + LC ++ +A + M G
Sbjct: 369 QAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPG 428
Query: 119 IITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNI 159
I TY+ + +C + + + L K+ KGI Y +
Sbjct: 429 IKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEYRV 469
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 90/212 (42%), Gaps = 9/212 (4%)
Query: 16 TYNSLMDGYCLVNEVNKAQAVFNTM-TQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQ 74
T S +D + F M G+ D S ++++ LC+ + A ++K
Sbjct: 177 TLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKN 236
Query: 75 MHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 134
+E I P+ + LI G C K+ A L EM G YN LD +CK
Sbjct: 237 TANE-IFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCR 295
Query: 135 VDKGIAL---IKKVI----DKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
L ++KV+ +G+ + T+N+L++ LCK R ++A +F + + G
Sbjct: 296 KKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQP 355
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 219
+ TY +I L + E ++ KM+ G
Sbjct: 356 DAETYLVLIRSLYQAARIGEGDEMIDKMKSAG 387
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 102/240 (42%), Gaps = 2/240 (0%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTM-TQMGVFPDVLSYSIMINGLCKMK 63
M+ +G N Y +L+ Y + A + M + PDV +YSI+I ++
Sbjct: 176 MINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVF 235
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQ-PADIITY 122
++ +LL M + I PNTITYN+LID K L +M D T
Sbjct: 236 AFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTM 295
Query: 123 NSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 182
NS L A ++ +K GI+P++ T+NILLD K G K V + + K
Sbjct: 296 NSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQK 355
Query: 183 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 242
Y+ TYN +I+ + G + L M+ +T +++ A + DK
Sbjct: 356 YHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADK 415
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 102/238 (42%), Gaps = 6/238 (2%)
Query: 11 KPNVVTYNSL--MDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
KPNV Y L M G C + KA +F M G + Y+ +++ + + A
Sbjct: 147 KPNVGIYVKLIVMLGKC--KQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAA 204
Query: 69 LNLLKQMHSEK-IIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 127
LL++M S P+ TY+ LI + +LL +M +G + ITYN+ +D
Sbjct: 205 FTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLID 264
Query: 128 ALCKGH-HVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 186
A K V+ LI+ + + +PD T N L G+I+ + ++ G
Sbjct: 265 AYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIE 324
Query: 187 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
N T+N +++ K G + + +M M+ +T+ +I A G+ + E
Sbjct: 325 PNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQME 382
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 101/237 (42%), Gaps = 7/237 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQM----GVFPDVLSYSIMI 56
+L+ M +QG++PN +TYN+L+D Y + ++ T+ QM PD + + +
Sbjct: 243 LLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMES---TLIQMLGEDDCKPDSWTMNSTL 299
Query: 57 NGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQP 116
+ N ++ S I PN T+N L+D K+G +++ M
Sbjct: 300 RAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYS 359
Query: 117 ADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 176
I+TYN +DA + + + L + + + I P T L+ + + V
Sbjct: 360 WTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGV 419
Query: 177 FQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
+ + L+ +N +++ + F E ++ ME G D IT+ T++ A
Sbjct: 420 LRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKA 476
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 113/232 (48%), Gaps = 12/232 (5%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEV-NKAQAVFNTMTQM--GVFPDVLSYSIMIN 57
M M K G VV++N+L+ CL +++ + +F+ Q + PD +SY ++I
Sbjct: 124 MFEEMDKLGTPRTVVSFNALLAA-CLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIK 182
Query: 58 GLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPA 117
C +A+ +++ M + + I + +++ L K G V A L EM +G
Sbjct: 183 SYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDL 242
Query: 118 DIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVF 177
D YN L K ++ L++++ G++PD +YN L+ C G + +A++V+
Sbjct: 243 DNTVYNVRLMNAAK-ESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVY 301
Query: 178 QDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFET 229
+ L + N T+ T+I LC GL+D+ LT+ K + +H F+T
Sbjct: 302 EGLEQP----NAATFRTLIFHLCINGLYDQGLTVFKK---SAIVHKIPDFKT 346
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 96/213 (45%), Gaps = 4/213 (1%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYS--IMINGLCKMKMVNEAL 69
P +T + V + +KA A++ +++ P Y+ + + L K + ++
Sbjct: 28 PGAITMSKAKSKLRKVQDPDKALAIYKSVSNNSTSPLSSRYAMELTVQRLAKSQRFSDIE 87
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
L++ + I ++LI + +A ++ +EM G P ++++N+ L A
Sbjct: 88 ALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAAC 147
Query: 130 CKGHHVDKGIALIKKVIDK--GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
++ L + + I PD +Y +L+ C G+ + A E+ +D+ KG +
Sbjct: 148 LHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEV 207
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGC 220
+ T++ L K GL DEA +L +M + GC
Sbjct: 208 TIIAFTTILGSLYKNGLVDEAESLWIEMVNKGC 240
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 38/208 (18%)
Query: 10 VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEAL 69
+ P+ ++Y L+ YC + KA + M GV +++++ ++ L K +V+EA
Sbjct: 170 ITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAE 229
Query: 70 NL----------------------------------LKQMHSEKIIPNTITYNSLIDGLC 95
+L +++M S + P+T++YN L+ C
Sbjct: 230 SLWIEMVNKGCDLDNTVYNVRLMNAAKESPERVKELMEEMSSVGLKPDTVSYNYLMTAYC 289
Query: 96 KTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMC 155
G +S A ++ + + QP + T+ + + LC D+G+ + KK PD
Sbjct: 290 VKGMMSEAKKVYEGLE---QP-NAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFK 345
Query: 156 TYNILLDGLCKCGRIKDAQEVFQDLFKK 183
T L +GL K R++DA+ V + + KK
Sbjct: 346 TCKHLTEGLVKNNRMEDARGVARIVKKK 373
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
++ M G+KP+ V+YN LM YC+ +++A+ V+ + Q P+ ++ +I LC
Sbjct: 265 LMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLEQ----PNAATFRTLIFHLC 320
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNA 103
+ ++ L + K+ IP+ T L +GL K ++ +A
Sbjct: 321 INGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNNRMEDA 363
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 109/239 (45%), Gaps = 12/239 (5%)
Query: 6 MKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMV 65
++ G+ ++ T N+L+ Y L+ ++ A +F+ Q DV++Y+++I+GL K + +
Sbjct: 144 LRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQR----DVVTYNVLIDGLVKAREI 199
Query: 66 NEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 125
A L M + + +++NSLI G + A +L DEM G D + S
Sbjct: 200 VRARELFDSMP----LRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVST 255
Query: 126 LDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 185
L A + KG A+ K + D L+D KCG I A E+F+ K
Sbjct: 256 LSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTL 315
Query: 186 NLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+T+N MI GL G + + KM +G D +TF +++ G D+A
Sbjct: 316 ----FTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEAR 370
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 99/209 (47%), Gaps = 7/209 (3%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
++V++NSL+ GY +N +A +F+ M +G+ PD ++ ++ + + +
Sbjct: 213 DLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIH 272
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 132
+++ ++ L+D K G + A E+ + + T+N+ + L
Sbjct: 273 DYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELC----SDKTLFTWNAMITGLAMH 328
Query: 133 HHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT- 191
+ + + +K++ GI+PD T+ +L G G + +A+ +F D + Y++N
Sbjct: 329 GNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLF-DQMRSLYDVNREMK 387
Query: 192 -YNTMINGLCKEGLFDEALTLMSKMEDNG 219
Y M + L + GL +EA ++ +M +G
Sbjct: 388 HYGCMADLLGRAGLIEEAAEMIEQMPKDG 416
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 118/245 (48%), Gaps = 42/245 (17%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCK--- 61
++ G+ NVV +SL+D Y V +A+ VFN M++ + +S+S ++ G C+
Sbjct: 291 LITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSK----KNSVSWSALLGGYCQNGE 346
Query: 62 ----MKMVNE--------------------ALNLLKQMHSEKI----IPNTITYNSLIDG 93
+++ E A+ L K++H + + N I ++LID
Sbjct: 347 HEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDL 406
Query: 94 LCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPD 153
K+G + +A + +M +R ++IT+N+ L AL + ++ ++ ++ KGI+PD
Sbjct: 407 YGKSGCIDSASRVYSKMSIR----NMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPD 462
Query: 154 MCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT--YNTMINGLCKEGLFDEALTL 211
++ +L G + + + F L K Y + T Y+ MI+ L + GLF+EA L
Sbjct: 463 YISFIAILTACGHTGMVDEGRNYFV-LMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENL 521
Query: 212 MSKME 216
+ + E
Sbjct: 522 LERAE 526
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 110/242 (45%), Gaps = 12/242 (4%)
Query: 3 AVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKM 62
A+ +G+ P+ T+ +++ + + + + + + G+ +V+ S +++ K
Sbjct: 254 AMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKC 313
Query: 63 KMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 122
V EA + M + N++++++L+ G C+ G+ A E+ EM + D+ +
Sbjct: 314 GSVREARQVFNGMSKK----NSVSWSALLGGYCQNGEHEKAIEIFREM----EEKDLYCF 365
Query: 123 NSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 182
+ L A V G + + + +G ++ + L+D K G I A V+ +
Sbjct: 366 GTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSI 425
Query: 183 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 242
+ N T+N M++ L + G +EA++ + M G D I+F I++A G D+
Sbjct: 426 R----NMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDE 481
Query: 243 AE 244
Sbjct: 482 GR 483
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 100/231 (43%), Gaps = 46/231 (19%)
Query: 3 AVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKM 62
V++ G + N ++L Y + E A+ VF+ M + PDV+ ++ +++ K
Sbjct: 187 GVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPE----PDVICWTAVLSAFSKN 242
Query: 63 KMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 122
+ EAL L MH K GL G T+
Sbjct: 243 DLYEEALGLFYAMHRGK-------------GLVPDGS---------------------TF 268
Query: 123 NSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 182
+ L A + +G + K+I GI ++ + LLD KCG +++A++VF + K
Sbjct: 269 GTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSK 328
Query: 183 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
K N+ +++ ++ G C+ G ++A+ + +ME+ D F T++ A
Sbjct: 329 K----NSVSWSALLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKA 371
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 81.6 bits (200), Expect = 4e-16, Method: Composition-based stats.
Identities = 60/248 (24%), Positives = 117/248 (47%), Gaps = 10/248 (4%)
Query: 7 KQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVF-PDVLSYSIMINGLCKMKMV 65
+ + PNVV+YN +++ +C V++A V+ + F P ++Y + GL + +
Sbjct: 209 QSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRI 268
Query: 66 NEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 125
+A +LL++M S+ ++ YN+LI G G A E DE+ + D I +F
Sbjct: 269 GDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATF 328
Query: 126 LDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG- 184
++ + + + + + ++DK + T N+LL+ K G+ +A +F ++
Sbjct: 329 MEYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHA 388
Query: 185 ----YNLNNWTYNTMINGLCKEGLFDEALTLM----SKMEDNGCIHDPITFETIISALFE 236
++N+ T M+N K G F EA+ SK+ + D + + I++ E
Sbjct: 389 PPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRFCE 448
Query: 237 KGENDKAE 244
+G +AE
Sbjct: 449 QGMLTEAE 456
Score = 76.6 bits (187), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/190 (23%), Positives = 89/190 (46%), Gaps = 2/190 (1%)
Query: 56 INGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQ 115
+ L + ++ A L +Q P T N++I + + + S + L +
Sbjct: 152 VQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSN 211
Query: 116 PA-DIITYNSFLDALCKGHHVDKGIALIKKVI-DKGIQPDMCTYNILLDGLCKCGRIKDA 173
++++YN ++A C +VD+ + + + ++ + P TY L GL + GRI DA
Sbjct: 212 IVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDA 271
Query: 174 QEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
+ +++ KG ++ YN +I G G FD+A+ +++ ++D I T +
Sbjct: 272 ASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEY 331
Query: 234 LFEKGENDKA 243
FEKG + +A
Sbjct: 332 WFEKGNDKEA 341
Score = 71.6 bits (174), Expect = 5e-13, Method: Composition-based stats.
Identities = 52/238 (21%), Positives = 111/238 (46%), Gaps = 9/238 (3%)
Query: 16 TYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYS-----IMINGLCKMKMVNEALN 70
T N L++ + + ++A A+FN M P++LS + IM+N KM +EA+N
Sbjct: 359 TGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAIN 418
Query: 71 LLKQM----HSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 126
K++ S+ + + + Y +++ C+ G ++ A E R PAD ++ + +
Sbjct: 419 TFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMI 478
Query: 127 DALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 186
DA K +D + ++ +++D ++ + L K G++ ++ EV + ++
Sbjct: 479 DAYLKAERIDDAVKMLDRMVDVNLRVVADFGARVFGELIKNGKLTESAEVLTKMGEREPK 538
Query: 187 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ Y+ ++ GLC D+A ++ +M + + E II + G ++ E
Sbjct: 539 PDPSIYDVVVRGLCDGDALDQAKDIVGEMIRHNVGVTTVLREFIIEVFEKAGRREEIE 596
Score = 57.4 bits (137), Expect = 9e-09, Method: Composition-based stats.
Identities = 49/226 (21%), Positives = 95/226 (42%), Gaps = 9/226 (3%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L M+ +G + YN+L+ GY + + +KA F+ + D + + +
Sbjct: 274 LLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWF 333
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+ EA+ + + +K + T N L++ K GK AW L +EM P +I+
Sbjct: 334 EKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNIL 393
Query: 121 TYNS-----FLDALCKGHHVDKGIALIK----KVIDKGIQPDMCTYNILLDGLCKCGRIK 171
+ NS ++ K + I K KV K D Y ++ C+ G +
Sbjct: 394 SVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLT 453
Query: 172 DAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMED 217
+A+ F + + + ++ MI+ K D+A+ ++ +M D
Sbjct: 454 EAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVD 499
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 81.6 bits (200), Expect = 4e-16, Method: Composition-based stats.
Identities = 63/224 (28%), Positives = 112/224 (50%), Gaps = 15/224 (6%)
Query: 18 NSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHS 77
N +++ Y ++ +A+ +F + + D +S++ MI+G + V+ A L +++H
Sbjct: 372 NIIINRYLKNGDLERAETLFERVKSLH---DKVSWTSMIDGYLEAGDVSRAFGLFQKLHD 428
Query: 78 EKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDK 137
+ + +T+ +I GL + + A LL +M G TY+ L + ++D+
Sbjct: 429 K----DGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQ 484
Query: 138 GIALIKKVIDKGI---QPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 194
G I VI K PD+ N L+ KCG I+DA E+F + +K + ++N+
Sbjct: 485 G-KHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQK----DTVSWNS 539
Query: 195 MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
MI GL GL D+AL L +M D+G + +TF ++SA G
Sbjct: 540 MIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSG 583
Score = 79.3 bits (194), Expect = 2e-15, Method: Composition-based stats.
Identities = 53/221 (23%), Positives = 113/221 (51%), Gaps = 21/221 (9%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L + ++G VV + SL+ Y +++A+ +F M + ++++ + M+ G
Sbjct: 64 LLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPER----NIVTCNAMLTGYV 119
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + +NEA L ++M N +++ ++ LC G+ +A EL DEM R +++
Sbjct: 120 KCRRMNEAWTLFREMPK-----NVVSWTVMLTALCDDGRSEDAVELFDEMPER----NVV 170
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
++N+ + L + ++K K+V D D+ ++N ++ G + +++A+ +F D+
Sbjct: 171 SWNTLVTGLIRNGDMEKA----KQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDM 226
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCI 221
+K N+ WT +M+ G C+ G EA L +M + +
Sbjct: 227 SEK--NVVTWT--SMVYGYCRYGDVREAYRLFCEMPERNIV 263
Score = 65.5 bits (158), Expect = 3e-11, Method: Composition-based stats.
Identities = 57/240 (23%), Positives = 108/240 (45%), Gaps = 48/240 (20%)
Query: 15 VTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQ 74
V++ S++DGY +V++A +F + D +++++MI+GL + ++ EA +LL
Sbjct: 401 VSWTSMIDGYLEAGDVSRAFGLFQKLHD----KDGVTWTVMISGLVQNELFAEAASLLSD 456
Query: 75 M-----------------------------HSEKII--------PNTITYNSLIDGLCKT 97
M H +I P+ I NSL+ K
Sbjct: 457 MVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKC 516
Query: 98 GKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTY 157
G + +A+E+ +M + D +++NS + L DK + L K+++D G +P+ T+
Sbjct: 517 GAIEDAYEIFAKMVQK----DTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTF 572
Query: 158 NILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT--YNTMINGLCKEGLFDEALTLMSKM 215
+L G I E+F+ + K+ Y++ Y +MI+ L + G EA +S +
Sbjct: 573 LGVLSACSHSGLITRGLELFKAM-KETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISAL 631
Score = 61.6 bits (148), Expect = 5e-10, Method: Composition-based stats.
Identities = 63/257 (24%), Positives = 112/257 (43%), Gaps = 47/257 (18%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
NVVT+ S++ GYC +V +A +F M + +++S++ MI+G ++ EAL L
Sbjct: 230 NVVTWTSMVYGYCRYGDVREAYRLFCEMPER----NIVSWTAMISGFAWNELYREALMLF 285
Query: 73 KQMHS--EKIIPNTITYNSLIDGLCKTG-------------KVSNAWELLDE-------- 109
+M + + PN T SL G +SN WE +D
Sbjct: 286 LEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSL 345
Query: 110 MHVRGQPA-------------DIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCT 156
+H+ D+ + N ++ K +++ L ++V K + D +
Sbjct: 346 VHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERV--KSLH-DKVS 402
Query: 157 YNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKME 216
+ ++DG + G + A +FQ L K + T+ MI+GL + LF EA +L+S M
Sbjct: 403 WTSMIDGYLEAGDVSRAFGLFQKLHDK----DGVTWTVMISGLVQNELFAEAASLLSDMV 458
Query: 217 DNGCIHDPITFETIISA 233
G T+ ++S+
Sbjct: 459 RCGLKPLNSTYSVLLSS 475
Score = 59.3 bits (142), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 86/171 (50%), Gaps = 20/171 (11%)
Query: 81 IPNTITY-------NSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGH 133
IPN +Y +LI G + +A LLD++ RG ++ + S L K
Sbjct: 32 IPNYGSYRRGFSNEEALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTG 91
Query: 134 HVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYN 193
++D+ L + + ++ I T N +L G KC R+ +A +F+++ K N+ +WT
Sbjct: 92 YLDEARVLFEVMPERNI----VTCNAMLTGYVKCRRMNEAWTLFREMPK---NVVSWT-- 142
Query: 194 TMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
M+ LC +G ++A+ L +M + + +++ T+++ L G+ +KA+
Sbjct: 143 VMLTALCDDGRSEDAVELFDEMPE----RNVVSWNTLVTGLIRNGDMEKAK 189
Score = 58.5 bits (140), Expect = 4e-09, Method: Composition-based stats.
Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 12/168 (7%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNL 71
P+++ NSL+ Y + A +F M Q D +S++ MI GL + ++ALNL
Sbjct: 501 PDLILQNSLVSMYAKCGAIEDAYEIFAKMVQ----KDTVSWNSMIMGLSHHGLADKALNL 556
Query: 72 LKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMH--VRGQPADIITYNSFLDAL 129
K+M PN++T+ ++ +G ++ EL M QP I Y S +D L
Sbjct: 557 FKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPG-IDHYISMIDLL 615
Query: 130 CKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCG-RIKDAQEV 176
+ + + I + PD Y LL GLC R KDA+ +
Sbjct: 616 GRAGKLKEAEEFISAL---PFTPDHTVYGALL-GLCGLNWRDKDAEGI 659
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 113/229 (49%)
Query: 15 VTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQ 74
+ ++ L+ Y + + VF + G V++ + +I+ K K+ + + +
Sbjct: 165 LVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYEC 224
Query: 75 MHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 134
++I PN IT +I LCK G++ +LLD + + +I S + + +
Sbjct: 225 AIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMR 284
Query: 135 VDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 194
+++ ++L+K+++ K + D Y+I++ K G + A++VF ++ ++G++ N++ Y
Sbjct: 285 IEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTV 344
Query: 195 MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ C++G EA L+S+ME++G TF +I G +K
Sbjct: 345 FVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKG 393
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 100/218 (45%), Gaps = 10/218 (4%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
++V Y +G ++ A+ VF+ M Q G + Y++ + C+ V EA LL
Sbjct: 308 SIVVYAKAKEG-----DLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLL 362
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 132
+M + P T+N LI G + G E + M RG +N + ++ K
Sbjct: 363 SEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKI 422
Query: 133 HHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 192
+V++ ++ K IDKG PD TY+ L+ G + I A ++F ++ + + +
Sbjct: 423 ENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVF 482
Query: 193 NTMINGLCKEGLFDEA---LTLMSK--MEDNGCIHDPI 225
++I GLC G + L +M K +E N I+D +
Sbjct: 483 RSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDAL 520
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 111/236 (47%)
Query: 8 QGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNE 67
+ + PN +T ++ C + + + + + P V+ + ++ + + + E
Sbjct: 228 KRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEE 287
Query: 68 ALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 127
+++LLK++ + ++ +TI Y+ ++ K G + +A ++ DEM RG A+ Y F+
Sbjct: 288 SMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVR 347
Query: 128 ALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
C+ V + L+ ++ + G+ P T+N L+ G + G + E + + +G
Sbjct: 348 VCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMP 407
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+ +N M+ + K + A +++K D G + D T+ +I E + D+A
Sbjct: 408 SCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQA 463
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 81/180 (45%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L+ M + GV P T+N L+ G+ K M G+ P +++ M+ +
Sbjct: 361 LLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVS 420
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K++ VN A +L + + +P+ TY+ LI G + + A +L EM R
Sbjct: 421 KIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFE 480
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
+ S + LC V+ G +K + + I+P+ Y+ L+ K G +A V+ ++
Sbjct: 481 VFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEM 540
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 86/205 (41%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNL 71
P+V+ SL+ + ++ ++ + + D + YSI++ K + A +
Sbjct: 267 PSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKV 326
Query: 72 LKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 131
+M N+ Y + C+ G V A LL EM G T+N + +
Sbjct: 327 FDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFAR 386
Query: 132 GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT 191
+KG+ + ++ +G+ P +N ++ + K + A E+ KG+ + T
Sbjct: 387 FGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHT 446
Query: 192 YNTMINGLCKEGLFDEALTLMSKME 216
Y+ +I G + D+AL L +ME
Sbjct: 447 YSHLIRGFIEGNDIDQALKLFYEME 471
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 115/238 (48%), Gaps = 3/238 (1%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKA-QAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNE 67
G K +V ++N+ + +++ + + + ++ G+ D +S++I I C++ +++
Sbjct: 136 GCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDG 195
Query: 68 ALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 127
A +++M + P+ +TY +LI L K + L + M ++G ++ T+N +
Sbjct: 196 AYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQ 255
Query: 128 ALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKD-AQEVFQDLFKKGYN 186
L L+ + ++PD TYN+++ G R D A+ V+ + KGY
Sbjct: 256 FLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFF-LARFPDMAERVYTAMHGKGYK 314
Query: 187 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
N Y TMI+ LCK G FD A T+ + T E ++ L +KG+ D+A+
Sbjct: 315 PNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAK 372
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 86/179 (48%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M K G+ P+VVTY +L+ ++N M G P++ ++++ I L +
Sbjct: 203 MEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRR 262
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+A +LL M ++ P++ITYN +I G A + MH +G ++ Y +
Sbjct: 263 AWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQT 322
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ LCK + D + K + K P++ T +LL GL K G++ A+ + + + ++
Sbjct: 323 MIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIMELVHRR 381
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 93/206 (45%)
Query: 7 KQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVN 66
K G+ + V++N + +C + ++ A M + G+ PDV++Y+ +I+ L K +
Sbjct: 170 KYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCV 229
Query: 67 EALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 126
L M + PN T+N I L + +A +LL M D ITYN +
Sbjct: 230 IGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVI 289
Query: 127 DALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 186
D + + KG +P++ Y ++ LCK G A + +D +K +
Sbjct: 290 KGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWY 349
Query: 187 LNNWTYNTMINGLCKEGLFDEALTLM 212
N T ++ GL K+G D+A ++M
Sbjct: 350 PNLDTVEMLLKGLVKKGQLDQAKSIM 375
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+L +M K V+P+ +TYN ++ G+ L + A+ V+ M G P++ Y MI+ LC
Sbjct: 269 LLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLC 328
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQP 116
K + A + K +K PN T L+ GL K G++ A +++ +H R P
Sbjct: 329 KAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIMELVHRRVPP 384
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 69/149 (46%), Gaps = 1/149 (0%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
+M+ +G KPN+ T+N + A + M ++ V PD ++Y+++I G +
Sbjct: 237 LMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLAR 296
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
+ A + MH + PN Y ++I LCK G A+ + + + ++ T
Sbjct: 297 FPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVE 356
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQP 152
L L K +D+ +++ +++ + + P
Sbjct: 357 MLLKGLVKKGQLDQAKSIM-ELVHRRVPP 384
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 103/219 (47%), Gaps = 10/219 (4%)
Query: 6 MKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMV 65
MK+ + VTY ++ YC + + NKA+ +F+ M + G V++YS +++ K + +
Sbjct: 380 MKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRL 439
Query: 66 NEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 125
++A+ L+ +M PN YNSLID + + A ++ EM D ++Y S
Sbjct: 440 SDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSM 499
Query: 126 LDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 185
+ A + +++ + L ++ + D I++ K RI + + QD+ +G
Sbjct: 500 ISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGT 559
Query: 186 NLNNWTYNTMINGLCKEGL----------FDEALTLMSK 214
L+ Y++ +N L GL FD A T SK
Sbjct: 560 RLDARLYSSALNALRDAGLNSQIRWLQESFDAAQTSTSK 598
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 109/242 (45%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
++A M K +K ++++G+ +A V+ + ++Y+I IN C
Sbjct: 340 VVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYC 399
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
+++ N+A L +M + + Y++++D KT ++S+A L+ +M RG +I
Sbjct: 400 RLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIW 459
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
YNS +D + + + + K++ + PD +Y ++ + ++ E++Q+
Sbjct: 460 IYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEF 519
Query: 181 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
++ M+ K DE + L+ M+ G D + + ++AL + G N
Sbjct: 520 RMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLYSSALNALRDAGLN 579
Query: 241 DK 242
+
Sbjct: 580 SQ 581
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 101/238 (42%), Gaps = 9/238 (3%)
Query: 14 VVTYNSLMDGYCLVNEVNKAQAVFNTMTQ-MGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
V ++ M G+ + + VF+ + Q +GV P Y ++ K+ ++ + L
Sbjct: 173 VSASDAAMKGFNKLQMYSSTIQVFDRLKQSVGVEPSPGCYCRIMEAHEKIGENHKVVELF 232
Query: 73 KQMHSEKII----PNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
++ S+++ + Y + L K+G+ A E+L+EM +G P Y+ + A
Sbjct: 233 QEFKSQRLSFLAKESGSIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRA 292
Query: 129 LCKGHHVDKGIALIKKVIDKGI--QPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 186
+ V L K+ K + P+MC +L+ + G ++ EV + K
Sbjct: 293 FAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLM--YVREGNMETTLEVVAAMRKAELK 350
Query: 187 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
+ + ++NG K+ F EA+ + C +T+ I+A + +KAE
Sbjct: 351 VTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAE 408
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 91/168 (54%), Gaps = 1/168 (0%)
Query: 55 MINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVR- 113
+I + + +++ L +LK+M + P+ ITYNS++D L + G V+ +L M
Sbjct: 183 IIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDC 242
Query: 114 GQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDA 173
+IITYN+ L+ + K D + + +++ GI+PD+ +Y ++D L + G +K++
Sbjct: 243 SVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKES 302
Query: 174 QEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCI 221
+F ++ ++ + + Y +I+ L K G F AL L ++++ +
Sbjct: 303 LRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDELKNTSSL 350
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 59/102 (57%)
Query: 9 GVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEA 68
V N++TYN++++G + ++N M Q G+ PD+LSY+ +I+ L + V E+
Sbjct: 243 SVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKES 302
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEM 110
L L +M +I P+ Y +LID L K+G +A +L DE+
Sbjct: 303 LRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDEL 344
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 89/169 (52%), Gaps = 1/169 (0%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
++ N ++ + +++K + M + PDV++Y+ +++ L + +VNE L +L
Sbjct: 176 RLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVL 235
Query: 73 KQMHSE-KIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 131
M + + N ITYN++++G+ K + + +EM G D+++Y + +D+L +
Sbjct: 236 STMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGR 295
Query: 132 GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
+V + + L ++ + I+P + Y L+D L K G + A ++ +L
Sbjct: 296 SGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDEL 344
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 72/142 (50%), Gaps = 1/142 (0%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQ-MGVFPDVLSYSIMINGL 59
+L M + KP+V+TYNS++D VN+ V +TM + V ++++Y+ ++NG+
Sbjct: 199 ILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGM 258
Query: 60 CKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADI 119
K + L + +M I P+ ++Y ++ID L ++G V + L DEM R +
Sbjct: 259 RKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSV 318
Query: 120 ITYNSFLDALCKGHHVDKGIAL 141
Y + +D L K + L
Sbjct: 319 YVYRALIDCLKKSGDFQSALQL 340
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 1/153 (0%)
Query: 87 YNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVI 146
Y +L T + LL E+ P +I N + A + +DK + ++K++
Sbjct: 145 YLNLARAFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMK 204
Query: 147 DKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK-GYNLNNWTYNTMINGLCKEGLF 205
+ +PD+ TYN +LD L + G + + V + + ++N TYNT++NG+ K F
Sbjct: 205 EWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRF 264
Query: 206 DEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
D L + ++M G D +++ +I +L G
Sbjct: 265 DMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSG 297
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 1/175 (0%)
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
+LLK++ + I N +I +T ++ +L EM D+ITYNS LD L
Sbjct: 163 SLLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDIL 222
Query: 130 CKGHHVDKGIALIKKVI-DKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
+ V++ + ++ + D + ++ TYN +L+G+ K R ++ ++ + G +
Sbjct: 223 GRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPD 282
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
+Y +I+ L + G E+L L +M+ + +I L + G+ A
Sbjct: 283 LLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSA 337
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 9/207 (4%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
+VVT++S++DGY E NKA +F+ M +MG + M++ +C + ALN
Sbjct: 204 DVVTWSSMIDGYVKRGEYNKALEIFDQMMRMG--SSKANEVTMVSVICACAHLG-ALNRG 260
Query: 73 KQMHSEKI---IPNT-ITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
K +H + +P T I SLID K G + +AW + V+ D + +N+ +
Sbjct: 261 KTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVK--ETDALMWNAIIGG 318
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
L + + + L K+ + I PD T+ LL G +K+A F+ L + G
Sbjct: 319 LASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPK 378
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKM 215
+ Y M++ L + GL +A +S+M
Sbjct: 379 SEHYACMVDVLSRAGLVKDAHDFISEM 405
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 122/261 (46%), Gaps = 53/261 (20%)
Query: 10 VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEAL 69
V+ NVV + S+++GY L ++ A+ F+ + D++ ++ MI+G +M + EA
Sbjct: 55 VEKNVVLWTSMINGYLLNKDLVSARRYFDLSPE----RDIVLWNTMISGYIEMGNMLEAR 110
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
+L QM ++ ++N++++G G + + D+M R ++ ++N +
Sbjct: 111 SLFDQMPCRDVM----SWNTVLEGYANIGDMEACERVFDDMPER----NVFSWNGLIKGY 162
Query: 130 CKGHHVDKGIALIKKVIDKG-IQP------------------------------------ 152
+ V + + K+++D+G + P
Sbjct: 163 AQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKV 222
Query: 153 DMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLM 212
D+ N L+D KCG I+ A EVF+ + ++ +L +W NTMINGL G EAL L
Sbjct: 223 DVNVKNALIDMYGKCGAIEIAMEVFKGIKRR--DLISW--NTMINGLAAHGHGTEALNLF 278
Query: 213 SKMEDNGCIHDPITFETIISA 233
+M+++G D +TF ++ A
Sbjct: 279 HEMKNSGISPDKVTFVGVLCA 299
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 86/210 (40%), Gaps = 9/210 (4%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALN 70
K +V N+L+D Y + A VF + + D++S++ MINGL EALN
Sbjct: 221 KVDVNVKNALIDMYGKCGAIEIAMEVFKGIKR----RDLISWNTMINGLAAHGHGTEALN 276
Query: 71 LLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY-NSFLDAL 129
L +M + I P+ +T+ ++ G V + + M I + +D L
Sbjct: 277 LFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLL 336
Query: 130 CKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 189
+ + + + I K+ ++ D + LL G K + D EV + K N
Sbjct: 337 SRAGFLTQAVEFINKM---PVKADAVIWATLL-GASKVYKKVDIGEVALEELIKLEPRNP 392
Query: 190 WTYNTMINGLCKEGLFDEALTLMSKMEDNG 219
+ + N G FD+A L M D G
Sbjct: 393 ANFVMLSNIYGDAGRFDDAARLKVAMRDTG 422
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 3/214 (1%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNL 71
P+V T N L+ G+ +V + ++ M + G P+ ++Y I I+G CK + EAL L
Sbjct: 208 PDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRL 267
Query: 72 LKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 131
+ M +LI G A +L DE+ RG D YN+ + +L K
Sbjct: 268 FEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMK 327
Query: 132 GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGR--IKDAQEVFQDLFKKGYNLNN 189
V I ++K++ +KGI+PD T++ + G+ K E +Q + ++
Sbjct: 328 CGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKT 387
Query: 190 WTYNTMINGLCKEGLFDEALTLMSKMEDNG-CIH 222
T ++ C G + L L M + G C H
Sbjct: 388 PTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPH 421
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 109/234 (46%), Gaps = 5/234 (2%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+K+G KPN VTY +DG+C +A +F M ++ V + +I+G +
Sbjct: 236 MVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARN 295
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+A L ++ + P+ YN+L+ L K G VS A +++ EM +G D +T++S
Sbjct: 296 KIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHS 355
Query: 125 FLDALCKGHHVD-KGI-ALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 182
+ K G+ +K+ ++ + P T +L+ C G + ++++ + +
Sbjct: 356 MFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLE 415
Query: 183 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG-CIHDPI--TFETIISA 233
KGY + + LC ++A + + G C+ +P+ ET +S+
Sbjct: 416 KGYCPHGHALELLTTALCARRRANDAFECSWQTVERGRCVSEPVYRMLETSLSS 469
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 81/163 (49%), Gaps = 8/163 (4%)
Query: 59 LCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLD-----EMHVR 113
L +M+ ++A L+ ++ K PN +++ S+ LCK K + E L+ E +
Sbjct: 113 LARMRYFDQAWALMAEV--RKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIF 170
Query: 114 GQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDA 173
+ + +N L A C + + ++ +K+ + PD+ T NILL G + G +
Sbjct: 171 RKKFGVDEFNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVTAT 229
Query: 174 QEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKME 216
+ + ++ K+G+ N+ TY I+G CK+ F EAL L M+
Sbjct: 230 ELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMD 272
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 109/234 (46%), Gaps = 13/234 (5%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNL 71
PN T+NS++ Y + A VF M VFPD S++ ++ E +
Sbjct: 103 PNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQI 162
Query: 72 LKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 131
++ + N+L++ ++G A ++LD M VR D +++NS L A +
Sbjct: 163 HGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVR----DAVSWNSLLSAYLE 218
Query: 132 GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT 191
VD+ AL ++ ++ ++ ++N ++ G G +K+A+EVF + + ++ +W
Sbjct: 219 KGLVDEARALFDEMEERNVE----SWNFMISGYAAAGLVKEAKEVFDSMPVR--DVVSW- 271
Query: 192 YNTMINGLCKEGLFDEALTLMSKMEDNGCIH-DPITFETIISALFEKGENDKAE 244
N M+ G ++E L + +KM D+ D T +++SA G + E
Sbjct: 272 -NAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGE 324
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 98/224 (43%), Gaps = 23/224 (10%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
NV ++N ++ GY V +A+ VF++M DV+S++ M+ + NE L +
Sbjct: 236 NVESWNFMISGYAAAGLVKEAKEVFDSMP----VRDVVSWNAMVTAYAHVGCYNEVLEVF 291
Query: 73 KQM---HSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
+M +EK P+ T S++ G +S + + G + + +D
Sbjct: 292 NKMLDDSTEK--PDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMY 349
Query: 130 CKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 189
K +DK + + + + D+ T+N ++ L G KDA E+F ++ +G+ N
Sbjct: 350 SKCGKIDKALEVFRATSKR----DVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNG 405
Query: 190 WTYNTMINGLCKEGLFDEALTLMSKM----------EDNGCIHD 223
T+ +++ G+ D+A L M E GC+ D
Sbjct: 406 ITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVD 449
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 124/242 (51%), Gaps = 10/242 (4%)
Query: 3 AVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKM 62
A+ + G++ + + SL++ YC V + A+ VF+ M + DV++++++I+G +
Sbjct: 298 AIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFE----KDVVTWNLIISGYVQQ 353
Query: 63 KMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 122
+V +A+ + + M EK+ + +T +L+ +T + E+ +DI+
Sbjct: 354 GLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLA 413
Query: 123 NSFLDALCK-GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF 181
++ +D K G VD KKV D ++ D+ +N LL + G +A +F +
Sbjct: 414 STVMDMYAKCGSIVDA-----KKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQ 468
Query: 182 KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 241
+G N T+N +I L + G DEA + +M+ +G I + I++ T+++ + + G ++
Sbjct: 469 LEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSE 528
Query: 242 KA 243
+A
Sbjct: 529 EA 530
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 108/235 (45%), Gaps = 5/235 (2%)
Query: 10 VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEAL 69
V+ +++ +N+L+ Y +A +F M GV P+V++++++I L + V+EA
Sbjct: 437 VEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAK 496
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
++ QM S IIPN I++ ++++G+ + G A L +M G + + L A
Sbjct: 497 DMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSAC 556
Query: 130 CKGHHVDKGIALIKKVIDKGIQPDMCTYNI-LLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
+ G + +I + + L+D KCG I A++VF L+
Sbjct: 557 AHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLS 616
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
N MI+ G EA+ L +E G D IT ++SA G+ ++A
Sbjct: 617 N----AMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQA 667
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 111/240 (46%), Gaps = 8/240 (3%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M KQGV+P VT ++ + + V + + G+ D + + ++N CK+ +
Sbjct: 265 MRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGL 324
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
+ A + +M + ++ T+N +I G + G V +A + M + D +T +
Sbjct: 325 IEYAEMVFDRMFEKDVV----TWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLAT 380
Query: 125 FLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 184
+ A + ++ G + I + D+ + ++D KCG I DA++VF +K
Sbjct: 381 LMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKD 440
Query: 185 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
L +NT++ + GL EAL L M+ G + IT+ II +L G+ D+A+
Sbjct: 441 LIL----WNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAK 496
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 104/248 (41%), Gaps = 41/248 (16%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M +GV PNV+T+N ++ +V++A+ +F M G+ P+++S++ M+NG+ +
Sbjct: 467 MQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGC 526
Query: 65 VNEALNLLKQMHSEKIIPNTITYN------------------------------------ 88
EA+ L++M + PN +
Sbjct: 527 SEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIET 586
Query: 89 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDK 148
SL+D K G ++ A ++ P N+ + A ++ + IAL + +
Sbjct: 587 SLVDMYAKCGDINKAEKVFGSKLYSELPLS----NAMISAYALYGNLKEAIALYRSLEGV 642
Query: 149 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF-KKGYNLNNWTYNTMINGLCKEGLFDE 207
G++PD T +L G I A E+F D+ K+ Y M++ L G ++
Sbjct: 643 GLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEK 702
Query: 208 ALTLMSKM 215
AL L+ +M
Sbjct: 703 ALRLIEEM 710
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
Query: 83 NTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALI 142
N + +N+L+ G + GK A L +M +G +T ++ L A V++G
Sbjct: 238 NAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSH 297
Query: 143 KKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKE 202
I G++ D LL+ CK G I+ A+ VF +F+K + T+N +I+G ++
Sbjct: 298 AIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEK----DVVTWNLIISGYVQQ 353
Query: 203 GLFDEALTLMSKMEDNGCIHDPITFETIISA 233
GL ++A+ + M +D +T T++SA
Sbjct: 354 GLVEDAIYMCQLMRLEKLKYDCVTLATLMSA 384
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 108/231 (46%), Gaps = 12/231 (5%)
Query: 3 AVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKM 62
A ++K G + N L+D Y + + VF+ M Q ++ +++ ++ GL K+
Sbjct: 44 ASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIY----TWNSVVTGLTKL 99
Query: 63 KMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 122
++EA +L + M + T+NS++ G + + A MH G + ++
Sbjct: 100 GFLDEADSLFRSMPER----DQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSF 155
Query: 123 NSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 182
S L A + ++KG+ + + D+ + L+D KCG + DAQ VF ++
Sbjct: 156 ASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGD 215
Query: 183 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
+ N+ +W N++I + G EAL + M ++ D +T ++ISA
Sbjct: 216 R--NVVSW--NSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISA 262
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 109/235 (46%), Gaps = 18/235 (7%)
Query: 10 VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEAL 69
++ +++ N+ +D Y + + +A+ +F++M +V++ + MI+G M +A
Sbjct: 285 LRNDIILSNAFVDMYAKCSRIKEARFIFDSMP----IRNVIAETSMISGYA-MAASTKAA 339
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
L+ +E+ N +++N+LI G + G+ A L + ++ + L A
Sbjct: 340 RLMFTKMAER---NVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKAC 396
Query: 130 CKGHHVDKGIALIKKVIDKGI------QPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ G+ V+ G + D+ N L+D KCG +++ VF+ + ++
Sbjct: 397 ADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER 456
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
+ ++N MI G + G +EAL L +M ++G D IT ++SA G
Sbjct: 457 ----DCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAG 507
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/304 (18%), Positives = 117/304 (38%), Gaps = 87/304 (28%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALN 70
+ N+ T+NS++ G + +++A ++F +M + D +++ M++G + EAL
Sbjct: 83 QRNIYTWNSVVTGLTKLGFLDEADSLFRSMPER----DQCTWNSMVSGFAQHDRCEEALC 138
Query: 71 LLKQMHSEKIIPNTITYNS-----------------------------------LIDGLC 95
MH E + N ++ S L+D
Sbjct: 139 YFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYS 198
Query: 96 KTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMC 155
K G V++A + DEM R +++++NS + + + + + + +++ ++PD
Sbjct: 199 KCGNVNDAQRVFDEMGDR----NVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEV 254
Query: 156 TY------------------------------------NILLDGLCKCGRIKDAQEVFQD 179
T N +D KC RIK+A+ +F
Sbjct: 255 TLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDS 314
Query: 180 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 239
+ + N +MI+G A + +KM + + +++ +I+ + GE
Sbjct: 315 MPIR----NVIAETSMISGYAMAASTKAARLMFTKMAER----NVVSWNALIAGYTQNGE 366
Query: 240 NDKA 243
N++A
Sbjct: 367 NEEA 370
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 10 VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEAL 69
V N+VT+N+++ GY + +F M + G+ P+ S + G ++ AL
Sbjct: 245 VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSEL----SAL 300
Query: 70 NLLKQMH---SEKIIPNTIT-YNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 125
L +Q+H S+ + N +T SLI CK G++ +AW+L + M + D++ +N+
Sbjct: 301 QLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVM----KKKDVVAWNAM 356
Query: 126 LDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 185
+ + + DK + L +++ID I+PD T+ +L G + F+ + + Y
Sbjct: 357 ISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMV-RDY 415
Query: 186 NLNNWT--YNTMINGLCKEGLFDEALTLMSKM 215
+ Y M++ L + G +EAL L+ M
Sbjct: 416 KVEPQPDHYTCMVDLLGRAGKLEEALKLIRSM 447
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 114/258 (44%), Gaps = 54/258 (20%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
+ ++N+++ GY E+ KA+ +F +M + + +S++ MI+G E +L
Sbjct: 154 DAASWNTMITGYARRGEMEKARELFYSMME----KNEVSWNAMISGYI------ECGDLE 203
Query: 73 KQMHSEKIIP--NTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 130
K H K+ P + + ++I G K KV A + +M V +++T+N+ +
Sbjct: 204 KASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVN---KNLVTWNAMISGYV 260
Query: 131 KGHHVDKGIALIKKVIDKGIQP-----------------------------------DMC 155
+ + G+ L + ++++GI+P D+
Sbjct: 261 ENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVT 320
Query: 156 TYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM 215
L+ CKCG + DA ++F+ + KK +N MI+G + G D+AL L +M
Sbjct: 321 ALTSLISMYCKCGELGDAWKLFEVMKKKDVV----AWNAMISGYAQHGNADKALCLFREM 376
Query: 216 EDNGCIHDPITFETIISA 233
DN D ITF ++ A
Sbjct: 377 IDNKIRPDWITFVAVLLA 394
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 88/181 (48%), Gaps = 5/181 (2%)
Query: 1 MLAVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLC 60
+ M+++G++PN +S + G ++ + + + +++ + DV + + +I+ C
Sbjct: 271 LFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYC 330
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 120
K + +A L + M + + + +N++I G + G A L EM D I
Sbjct: 331 KCGELGDAWKLFEVMKKKDV----VAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWI 386
Query: 121 TYNSFLDALCKGHHVDKGIALIKKVI-DKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
T+ + L A V+ G+A + ++ D ++P Y ++D L + G++++A ++ +
Sbjct: 387 TFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRS 446
Query: 180 L 180
+
Sbjct: 447 M 447
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 75/145 (51%), Gaps = 17/145 (11%)
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCK-TGKVSNAWELLDEMHVRGQPADIITYN 123
++ AL + M ++ NTIT+NSL+ G+ K ++ A +L DE+ +P D +YN
Sbjct: 77 IDGALRVFHGMRAK----NTITWNSLLIGISKDPSRMMEAHQLFDEI---PEP-DTFSYN 128
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
L + + +K + ++ K D ++N ++ G + G ++ A+E+F + +K
Sbjct: 129 IMLSCYVRNVNFEKAQSFFDRMPFK----DAASWNTMITGYARRGEMEKARELFYSMMEK 184
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEA 208
N ++N MI+G + G ++A
Sbjct: 185 ----NEVSWNAMISGYIECGDLEKA 205
>AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:20791259-20792314 FORWARD
LENGTH=351
Length = 351
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 85/158 (53%), Gaps = 3/158 (1%)
Query: 51 SYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEM 110
SY +I LCK+ +++AL L+ M + +T ++ +++ L K ++ AW +++ M
Sbjct: 127 SYETLIARLCKLGRIDDALVLINDMAIGEFGLSTCVFHPILNTLTKKNRIEEAWRVVELM 186
Query: 111 HVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKG---IQPDMCTYNILLDGLCKC 167
P D+ +YN FL + C V + +++K+ ++ + PD TY+ L+ G CK
Sbjct: 187 RSHAIPVDVTSYNYFLTSHCYDGDVAEASRVLRKMEEEEEGVMSPDTRTYDALVLGACKS 246
Query: 168 GRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLF 205
GR++ A + + + ++G ++ T+ +I + + G +
Sbjct: 247 GRVEAAMAILRRMEEEGLSVLYATHAHVIGEMVESGYY 284
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 82/171 (47%), Gaps = 10/171 (5%)
Query: 78 EKIIPNT-------ITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 130
+I+P T +Y +LI LCK G++ +A L+++M + ++ L+ L
Sbjct: 112 RRILPQTDAGYTRKHSYETLIARLCKLGRIDDALVLINDMAIGEFGLSTCVFHPILNTLT 171
Query: 131 KGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL--- 187
K + +++ +++ + I D+ +YN L C G + +A V + + ++ +
Sbjct: 172 KKNRIEEAWRVVELMRSHAIPVDVTSYNYFLTSHCYDGDVAEASRVLRKMEEEEEGVMSP 231
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
+ TY+ ++ G CK G + A+ ++ +ME+ G T +I + E G
Sbjct: 232 DTRTYDALVLGACKSGRVEAAMAILRRMEEEGLSVLYATHAHVIGEMVESG 282
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 3/165 (1%)
Query: 28 NEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEK---IIPNT 84
N + +A V M + DV SY+ + C V EA +L++M E+ + P+T
Sbjct: 174 NRIEEAWRVVELMRSHAIPVDVTSYNYFLTSHCYDGDVAEASRVLRKMEEEEEGVMSPDT 233
Query: 85 ITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKK 144
TY++L+ G CK+G+V A +L M G T+ + + + + + +
Sbjct: 234 RTYDALVLGACKSGRVEAAMAILRRMEEEGLSVLYATHAHVIGEMVESGYYALSVEFVMA 293
Query: 145 VIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 189
K + D L L K R K+A+ V +++ +G + +
Sbjct: 294 YAGKDKRLDEENLGSLASKLIKRKRFKEAKMVLKEMSVRGLRMGD 338
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 92/208 (44%), Gaps = 5/208 (2%)
Query: 16 TYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFP-DVLSYSIMINGLCKMKMVNEALNLLKQ 74
+Y +L+ C + ++ A + N M +G F + ++N L K + EA +++
Sbjct: 127 SYETLIARLCKLGRIDDALVLINDMA-IGEFGLSTCVFHPILNTLTKKNRIEEAWRVVEL 185
Query: 75 MHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQ---PADIITYNSFLDALCK 131
M S I + +YN + C G V+ A +L +M + D TY++ + CK
Sbjct: 186 MRSHAIPVDVTSYNYFLTSHCYDGDVAEASRVLRKMEEEEEGVMSPDTRTYDALVLGACK 245
Query: 132 GHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT 191
V+ +A+++++ ++G+ T+ ++ + + G + E K L+
Sbjct: 246 SGRVEAAMAILRRMEEEGLSVLYATHAHVIGEMVESGYYALSVEFVMAYAGKDKRLDEEN 305
Query: 192 YNTMINGLCKEGLFDEALTLMSKMEDNG 219
++ + L K F EA ++ +M G
Sbjct: 306 LGSLASKLIKRKRFKEAKMVLKEMSVRG 333
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 12 PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNL 71
PNV+ +N+++ Y LV ++ + F++M G++ D +Y+ ++ + L
Sbjct: 65 PNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLS----DLRF 120
Query: 72 LKQMHSEKIIPNTITYNSLIDGLCKT----GKVSNAWELLDEMHVRGQPADIITYNSFLD 127
K +H E I + G+ + G++ +A ++ DEM R +++ +N +
Sbjct: 121 GKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSER----NVVVWNLMIR 176
Query: 128 ALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 187
C V++G+ L K++ ++ I ++N ++ L KCGR ++A E+F ++ +G++
Sbjct: 177 GFCDSGDVERGLHLFKQMSERSI----VSWNSMISSLSKCGRDREALELFCEMIDQGFDP 232
Query: 188 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPIT 226
+ T T++ G+ D + S E +G D IT
Sbjct: 233 DEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFIT 271
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 110/244 (45%), Gaps = 12/244 (4%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
+ KQ + ++V++NS++ +A +F M G PD + ++ + +
Sbjct: 190 LFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGV 249
Query: 65 VNEALNLLKQMHSEKIIPNTITY-NSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
++ + S + + IT N+L+D CK+G + A + +M R +++++N
Sbjct: 250 LDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRR----NVVSWN 305
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKG-IQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 182
+ + + GI L +I++G + P+ T+ +L G+++ +E+F + +
Sbjct: 306 TLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMME 365
Query: 183 KGYNLNNWT--YNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 240
+ + L T Y M++ + + G EA + M N + + +++SA G+
Sbjct: 366 R-FKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNA---NAAMWGSLLSACRSHGDV 421
Query: 241 DKAE 244
AE
Sbjct: 422 KLAE 425
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 77.4 bits (189), Expect = 7e-15, Method: Composition-based stats.
Identities = 70/276 (25%), Positives = 123/276 (44%), Gaps = 51/276 (18%)
Query: 3 AVMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKM 62
A + K G +V +L+D Y + +A+ VF+ M + D ++++ M++ ++
Sbjct: 893 AHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPER----DDIAWTTMVSAYRRV 948
Query: 63 KMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 122
++ A +L QM SEK N T N LI+G G + A L ++M V+ DII++
Sbjct: 949 LDMDSANSLANQM-SEK---NEATSNCLINGYMGLGNLEQAESLFNQMPVK----DIISW 1000
Query: 123 NSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNI----------------------- 159
+ + + + IA+ K++++GI PD T +
Sbjct: 1001 TTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQ 1060
Query: 160 ------------LLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDE 207
L+D KCG ++ A VF +L KK N + +N++I GL G E
Sbjct: 1061 NGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKK----NLFCWNSIIEGLAAHGFAQE 1116
Query: 208 ALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
AL + +KME + +TF ++ +A G D+
Sbjct: 1117 ALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEG 1152
Score = 72.4 bits (176), Expect = 3e-13, Method: Composition-based stats.
Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 18/230 (7%)
Query: 6 MKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMV 65
M Q +PNV YN+L G+ + ++ ++ M + V P +YS ++
Sbjct: 828 MTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRF 887
Query: 66 NEALNLLKQMHSEKIIP--NTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
E+L Q H K + +LID TG++ A ++ DEM R D I +
Sbjct: 888 GESL----QAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPER----DDIAWT 939
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
+ + A + +D +L ++ +K + T N L++G G ++ A+ +F + K
Sbjct: 940 TMVSAYRRVLDMDSANSLANQMSEK----NEATSNCLINGYMGLGNLEQAESLFNQMPVK 995
Query: 184 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
++ +WT TMI G + + EA+ + KM + G I D +T T+ISA
Sbjct: 996 --DIISWT--TMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISA 1041
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 77.4 bits (189), Expect = 7e-15, Method: Composition-based stats.
Identities = 58/231 (25%), Positives = 109/231 (47%), Gaps = 12/231 (5%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
N V++N+++ GY + A+ +F+ M +V +++ MI G + ++EA NL
Sbjct: 311 NEVSWNAMLAGYVQGERMEMAKELFDVMPCR----NVSTWNTMITGYAQCGKISEAKNLF 366
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 132
+M + +++ ++I G ++G A L +M G + +++S L
Sbjct: 367 DKMPKR----DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADV 422
Query: 133 HHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 192
++ G L +++ G + N LL CKCG I++A ++F+++ G ++ +W
Sbjct: 423 VALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEM--AGKDIVSW-- 478
Query: 193 NTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
NTMI G + G + AL M+ G D T ++SA G DK
Sbjct: 479 NTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKG 529
Score = 76.3 bits (186), Expect = 2e-14, Method: Composition-based stats.
Identities = 55/231 (23%), Positives = 118/231 (51%), Gaps = 24/231 (10%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
N V++N+L+ Y +++ +A +F + + +S++ ++ G K K + EA
Sbjct: 187 NDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCLLGGFVKKKKIVEARQFF 242
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 132
M+ + + +++N++I G ++GK+ A +L DE V+ D+ T+ A+ G
Sbjct: 243 DSMN----VRDVVSWNTIITGYAQSGKIDEARQLFDESPVQ----DVFTWT----AMVSG 290
Query: 133 HHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 192
+ ++ + +++ DK + + ++N +L G + R++ A+E+F + + N++ W
Sbjct: 291 YIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCR--NVSTW-- 346
Query: 193 NTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 243
NTMI G + G EA L KM DP+++ +I+ + G + +A
Sbjct: 347 NTMITGYAQCGKISEAKNLFDKMPK----RDPVSWAAMIAGYSQSGHSFEA 393
Score = 68.2 bits (165), Expect = 5e-12, Method: Composition-based stats.
Identities = 51/222 (22%), Positives = 106/222 (47%), Gaps = 24/222 (10%)
Query: 15 VTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQ 74
V+YN ++ GY E A+ +F+ M + D++S+++MI G + + + +A L +
Sbjct: 96 VSYNGMISGYLRNGEFELARKLFDEMPER----DLVSWNVMIKGYVRNRNLGKARELFEI 151
Query: 75 MHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 134
M + ++N+++ G + G V +A + D M + +++N+ L A +
Sbjct: 152 MPERDV----CSWNTMLSGYAQNGCVDDARSVFDRMPEKND----VSWNALLSAYVQNSK 203
Query: 135 VDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 194
+++ L K + + ++N LL G K +I +A++ F + + ++ +W NT
Sbjct: 204 MEEACMLFKSRENWA----LVSWNCLLGGFVKKKKIVEARQFFDSMNVR--DVVSW--NT 255
Query: 195 MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFE 236
+I G + G DEA L D + D T+ ++S +
Sbjct: 256 IITGYAQSGKIDEARQLF----DESPVQDVFTWTAMVSGYIQ 293
Score = 65.9 bits (159), Expect = 3e-11, Method: Composition-based stats.
Identities = 48/223 (21%), Positives = 104/223 (46%), Gaps = 43/223 (19%)
Query: 48 DVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELL 107
D+ +++ I+ + NEAL + K+M ++++YN +I G + G+ A +L
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRW----SSVSYNGMISGYLRNGEFELARKLF 118
Query: 108 DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKC 167
DEM R D++++N + KG+ ++ + +++ + + D+C++N +L G +
Sbjct: 119 DEMPER----DLVSWN----VMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQN 170
Query: 168 GRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKME----------- 216
G + DA+ VF + +K N+ ++N +++ + +EA L E
Sbjct: 171 GCVDDARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLL 226
Query: 217 ----------------DNGCIHDPITFETIISALFEKGENDKA 243
D+ + D +++ TII+ + G+ D+A
Sbjct: 227 GGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEA 269
Score = 58.9 bits (141), Expect = 3e-09, Method: Composition-based stats.
Identities = 52/239 (21%), Positives = 100/239 (41%), Gaps = 44/239 (18%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
NV T+N+++ GY ++++A+ +F+ M + D +S++ MI G + EAL L
Sbjct: 342 NVSTWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSWAAMIAGYSQSGHSFEALRLF 397
Query: 73 KQMHSEKIIPNTITY-----------------------------------NSLIDGLCKT 97
QM E N ++ N+L+ CK
Sbjct: 398 VQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKC 457
Query: 98 GKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTY 157
G + A +L EM + DI+++N+ + + + + + + +G++PD T
Sbjct: 458 GSIEEANDLFKEMAGK----DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATM 513
Query: 158 NILLDGLCKCGRIKDAQEVFQDLFKK-GYNLNNWTYNTMINGLCKEGLFDEALTLMSKM 215
+L G + ++ F + + G N+ Y M++ L + GL ++A LM M
Sbjct: 514 VAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNM 572
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 115/259 (44%), Gaps = 51/259 (19%)
Query: 18 NSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHS 77
NSLM Y + + +A+AVF M D +S++ +I GL + K ++EA L ++M
Sbjct: 314 NSLMSMYSKLGYMGEAKAVFGVMKN----KDSVSWNSLITGLVQRKQISEAYELFEKMPG 369
Query: 78 EKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDK 137
+ + +++ +I G G++S EL M + D IT+ + + A + ++
Sbjct: 370 K----DMVSWTDMIKGFSGKGEISKCVELFGMMPEK----DNITWTAMISAFVSNGYYEE 421
Query: 138 GIALIKKVIDKGIQPDMCTYNI----------LLDGL----------------------- 164
+ K++ K + P+ T++ L++GL
Sbjct: 422 ALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVS 481
Query: 165 --CKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIH 222
CKCG DA ++F + + N +YNTMI+G G +AL L S +E +G
Sbjct: 482 MYCKCGNTNDAYKIFSCISEP----NIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEP 537
Query: 223 DPITFETIISALFEKGEND 241
+ +TF ++SA G D
Sbjct: 538 NGVTFLALLSACVHVGYVD 556
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 113/268 (42%), Gaps = 53/268 (19%)
Query: 3 AVMMKQGVK-PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCK 61
AV + QG+ VV+ +S++ GYC + + A+++F+ MT+ +V++++ MI+G K
Sbjct: 196 AVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTER----NVITWTAMIDGYFK 251
Query: 62 MKMVNEALNLLKQMHSE---KIIPNTITY------------------------------- 87
+ L +M E K+ NT+
Sbjct: 252 AGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLF 311
Query: 88 --NSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKV 145
NSL+ K G + A + M + D +++NS + L + + + L +K+
Sbjct: 312 LGNSLMSMYSKLGYMGEAKAVFGVM----KNKDSVSWNSLITGLVQRKQISEAYELFEKM 367
Query: 146 IDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLF 205
K DM ++ ++ G G I E+F + +K +N T+ MI+ G +
Sbjct: 368 PGK----DMVSWTDMIKGFSGKGEISKCVELFGMMPEK----DNITWTAMISAFVSNGYY 419
Query: 206 DEALTLMSKMEDNGCIHDPITFETIISA 233
+EAL KM + TF +++SA
Sbjct: 420 EEALCWFHKMLQKEVCPNSYTFSSVLSA 447
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 109/265 (41%), Gaps = 56/265 (21%)
Query: 15 VTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQ 74
V N L+ GY + N+A VF M +V+S S M++G CKM + +A +L +
Sbjct: 178 VASNVLLSGYLRAGKWNEAVRVFQGMA----VKEVVSCSSMVHGYCKMGRIVDARSLFDR 233
Query: 75 MHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQP--------------ADII 120
M N IT+ ++IDG K G + + L M G D +
Sbjct: 234 MTER----NVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFV 289
Query: 121 TY----------------------NSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYN 158
Y NS + K ++ + A+ + +K D ++N
Sbjct: 290 RYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNK----DSVSWN 345
Query: 159 ILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDN 218
L+ GL + +I +A E+F+ + G ++ +WT MI G +G + + L M +
Sbjct: 346 SLITGLVQRKQISEAYELFEKM--PGKDMVSWT--DMIKGFSGKGEISKCVELFGMMPEK 401
Query: 219 GCIHDPITFETIISALFEKGENDKA 243
D IT+ +ISA G ++A
Sbjct: 402 ----DNITWTAMISAFVSNGYYEEA 422
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 93/203 (45%), Gaps = 7/203 (3%)
Query: 15 VTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQ 74
+T+ +++ + +A F+ M Q V P+ ++S +++ + + E L + +
Sbjct: 404 ITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGR 463
Query: 75 MHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 134
+ I+ + NSL+ CK G ++A+++ + +P +I++YN+ +
Sbjct: 464 VVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCI---SEP-NIVSYNTMISGYSYNGF 519
Query: 135 VDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT--Y 192
K + L + G +P+ T+ LL G + + F+ + K YN+ Y
Sbjct: 520 GKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSM-KSSYNIEPGPDHY 578
Query: 193 NTMINGLCKEGLFDEALTLMSKM 215
M++ L + GL D+A L+S M
Sbjct: 579 ACMVDLLGRSGLLDDASNLISTM 601
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 86/202 (42%), Gaps = 42/202 (20%)
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVR----------- 113
+ EA + +QM + I+ ++ ++I + GK+S AW++ DEM VR
Sbjct: 66 LQEAEAIFRQMSNRSIV----SWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITA 121
Query: 114 --------GQPADI---------ITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCT 156
G+ ++ ++Y + + + D+ L + K D
Sbjct: 122 MIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKF--RDSVA 179
Query: 157 YNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKME 216
N+LL G + G+ +A VFQ + K + ++M++G CK G +A +L +M
Sbjct: 180 SNVLLSGYLRAGKWNEAVRVFQGMAVKEVV----SCSSMVHGYCKMGRIVDARSLFDRMT 235
Query: 217 DNGCIHDPITFETIISALFEKG 238
+ + IT+ +I F+ G
Sbjct: 236 E----RNVITWTAMIDGYFKAG 253
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 80/177 (45%), Gaps = 5/177 (2%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKM 64
M+++ V PN T++S++ + ++ + + + +M + D+ + +++ CK
Sbjct: 429 MLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGN 488
Query: 65 VNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 124
N+A + + PN ++YN++I G G A +L + G+ + +T+ +
Sbjct: 489 TNDAYKIFSCISE----PNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLA 544
Query: 125 FLDALCKGHHVDKGIALIKKVIDK-GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 180
L A +VD G K + I+P Y ++D L + G + DA + +
Sbjct: 545 LLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTM 601
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 6/155 (3%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALN 70
+PN+V+YN+++ GY KA +F+ + G P+ +++ +++ + V+
Sbjct: 501 EPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWK 560
Query: 71 LLKQMHSE-KIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
K M S I P Y ++D L ++G + +A L+ M + + S L A
Sbjct: 561 YFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSG---VWGSLLSAS 617
Query: 130 CKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGL 164
VD KK+I+ ++PD T ++L L
Sbjct: 618 KTHLRVDLAELAAKKLIE--LEPDSATPYVVLSQL 650
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 109/228 (47%), Gaps = 15/228 (6%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
+++++NS++DGY + A+ +F+ M + DV++++ MI+G K+ V+ A L
Sbjct: 251 DLISWNSMIDGYVKHGRIEDAKGLFDVMPRR----DVVTWATMIDGYAKLGFVHHAKTLF 306
Query: 73 KQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQ--PADIITYNSFLDALC 130
QM ++ YNS++ G + A E+ +M P D T L A+
Sbjct: 307 DQMPHRDVV----AYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDT-TLVIVLPAIA 361
Query: 131 KGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 190
+ + K I + +++K L+D KCG I+ A VF+ + K ++++W
Sbjct: 362 QLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENK--SIDHW 419
Query: 191 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 238
N MI GL GL + A ++ ++E D ITF +++A G
Sbjct: 420 --NAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSG 465
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 79/147 (53%), Gaps = 9/147 (6%)
Query: 69 LNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 128
L L +QM ++++YNS+IDG K G + +A EL D M + + ++I++NS +
Sbjct: 172 LGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPM--EMKNLISWNSMISG 229
Query: 129 LCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 188
+ G+ + K+ + D+ ++N ++DG K GRI+DA+ +F + ++ +
Sbjct: 230 YAQ---TSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRR----D 282
Query: 189 NWTYNTMINGLCKEGLFDEALTLMSKM 215
T+ TMI+G K G A TL +M
Sbjct: 283 VVTWATMIDGYAKLGFVHHAKTLFDQM 309
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 108/227 (47%), Gaps = 12/227 (5%)
Query: 7 KQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVN 66
+ G++ + N+LMD + ++++A+ +F+ + + ++S++ MI+G + +++
Sbjct: 285 ENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKR----TIVSWTTMISGYARCGLLD 340
Query: 67 EALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 126
+ L M + ++ +N++I G + + +A L EM D IT L
Sbjct: 341 VSRKLFDDMEEKDVV----LWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCL 396
Query: 127 DALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 186
A + +D GI + + + + ++ L+D KCG I +A VF + +
Sbjct: 397 SACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR--- 453
Query: 187 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 233
N+ TY +I GL G A++ ++M D G D ITF ++SA
Sbjct: 454 -NSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSA 499
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 110/268 (41%), Gaps = 48/268 (17%)
Query: 11 KPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALN 70
K +V++ +++ GY ++ ++ +F+ M + DV+ ++ MI G + K +AL
Sbjct: 320 KRTIVSWTTMISGYARCGLLDVSRKLFDDMEE----KDVVLWNAMIGGSVQAKRGQDALA 375
Query: 71 LLKQMHSEKIIPNTITY-----------------------------------NSLIDGLC 95
L ++M + P+ IT SL+D
Sbjct: 376 LFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYA 435
Query: 96 KTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMC 155
K G +S A + + R +TY + + L I+ ++ID GI PD
Sbjct: 436 KCGNISEALSVFHGIQTRNS----LTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEI 491
Query: 156 TYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT--YNTMINGLCKEGLFDEALTLMS 213
T+ LL C G I+ ++ F + K +NLN Y+ M++ L + GL +EA LM
Sbjct: 492 TFIGLLSACCHGGMIQTGRDYFSQM-KSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLME 550
Query: 214 K--MEDNGCIHDPITFETIISALFEKGE 239
ME + + + F + E GE
Sbjct: 551 SMPMEADAAVWGALLFGCRMHGNVELGE 578
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 111/258 (43%), Gaps = 47/258 (18%)
Query: 3 AVMMKQGVK-PNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGV---FPDVLSYSIMING 58
+V + +G++ PN+ ++N + G+ ++ ++ M + G PD +Y ++
Sbjct: 106 SVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKV 165
Query: 59 LCKMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPAD 118
+++ + +L + ++ + +N+ I G + NA ++ DE VR D
Sbjct: 166 CADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVR----D 221
Query: 119 IITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCT---------------------- 156
++++N ++ K +K I + K + +G++PD T
Sbjct: 222 LVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYE 281
Query: 157 -------------YNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEG 203
N L+D KCG I +A+ +F +L K+ + +WT TMI+G + G
Sbjct: 282 YVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKR--TIVSWT--TMISGYARCG 337
Query: 204 LFDEALTLMSKMEDNGCI 221
L D + L ME+ +
Sbjct: 338 LLDVSRKLFDDMEEKDVV 355
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
N +TY +++ G L + + A + FN M G+ PD +++ +++ C M+ +
Sbjct: 454 NSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYF 513
Query: 73 KQMHSE-KIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 131
QM S + P Y+ ++D L + G + A L++ M + AD + + L C+
Sbjct: 514 SQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPME---ADAAVWGALLFG-CR 569
Query: 132 GH-HVDKGIALIKKVIDKGIQPDMCTYNILLDGL 164
H +V+ G KK+++ + P +LLDG+
Sbjct: 570 MHGNVELGEKAAKKLLE--LDPSDSGIYVLLDGM 601
>AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=1006
Length = 1006
Score = 76.3 bits (186), Expect = 2e-14, Method: Composition-based stats.
Identities = 63/272 (23%), Positives = 109/272 (40%), Gaps = 42/272 (15%)
Query: 10 VKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEAL 69
++P+VV YN++++ + A V + Q G P ++Y +++ + + N
Sbjct: 589 LEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVH 648
Query: 70 NLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 129
++M IPN + Y L++ L K GK A +++M RG Y L
Sbjct: 649 EFFRKMQKSS-IPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCL 707
Query: 130 CKGHHVDKGIALI----------------------------KKVIDKGIQPDMCTYNILL 161
C ++G+ ++ KK+ +P + TY L+
Sbjct: 708 CSAGRCNEGLNMVNFVNPVVLKLIENLIYKADLVHTIQFQLKKICRVANKPLVVTYTGLI 767
Query: 162 DGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG-- 219
G IK+A +F D KK + N T N M+ + GLF+EA L KM ++G
Sbjct: 768 QACVDSGNIKNAAYIF-DQMKKVCSPNLVTCNIMLKAYLQGGLFEEARELFQKMSEDGNH 826
Query: 220 ----------CIHDPITFETIISALFEKGEND 241
+ D TF T++ E+ + D
Sbjct: 827 IKNSSDFESRVLPDTYTFNTMLDTCAEQEKWD 858
Score = 61.2 bits (147), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/187 (23%), Positives = 85/187 (45%), Gaps = 19/187 (10%)
Query: 52 YSIMINGLCKMKMVNEALNLLKQMHSE-KIIPNTITYNSLIDGLCKTGKVSNAWELLDEM 110
Y+ +N L K + EALN+ M + P+ + Y S+ L + G + + ++D M
Sbjct: 510 YTTALNVLGKSRRPVEALNVFHAMLLQISSYPDMVAYRSIAVTLGQAGHIKELFYVIDTM 569
Query: 111 HV----------------RGQPADIITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDM 154
R +P D++ YN+ L+A + + +++++ +G +P
Sbjct: 570 RSPPKKKFKPTTLEKWDPRLEP-DVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSP 628
Query: 155 CTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSK 214
TY ++++ + C + E F+ + +K N Y ++N L KEG DEA+ +
Sbjct: 629 VTYGLIMEVMLACEKYNLVHEFFRKM-QKSSIPNALAYRVLVNTLWKEGKSDEAVHTVED 687
Query: 215 MEDNGCI 221
ME G +
Sbjct: 688 MESRGIV 694
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 97/228 (42%), Gaps = 8/228 (3%)
Query: 5 MMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFP----DVLSYSIMINGLC 60
M+++G++P V Y +L+ Y N ++ A F+ + +M FP DV +YS ++
Sbjct: 150 MLEEGLEPTVELYTALLAAYTRSNLIDDA---FSILDKMKSFPQCQPDVFTYSTLLKACV 206
Query: 61 KMKMVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQ-PADI 119
+ +L K+M I PNT+T N ++ G + G+ ++L +M V D+
Sbjct: 207 DASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDV 266
Query: 120 ITYNSFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 179
T N L +D + +K + GI+P+ T+NIL+ K V +
Sbjct: 267 WTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEY 326
Query: 180 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITF 227
+ K + TYN +I G +M G D TF
Sbjct: 327 MRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTF 374
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/204 (18%), Positives = 92/204 (45%)
Query: 4 VMMKQGVKPNVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMK 63
+++ KP+V T N ++ + + +++ ++ + G+ P+ +++I+I K +
Sbjct: 256 MLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKR 315
Query: 64 MVNEALNLLKQMHSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 123
M ++ ++++ M + T TYN++I+ G N D+M G AD T+
Sbjct: 316 MYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFC 375
Query: 124 SFLDALCKGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 183
++ K I+ ++ I + YN ++ K + + + V+ + ++
Sbjct: 376 CLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKER 435
Query: 184 GYNLNNWTYNTMINGLCKEGLFDE 207
++ T+ M+ KEG+ D+
Sbjct: 436 QCVCDSRTFEIMVEAYEKEGMNDK 459
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 98/220 (44%), Gaps = 13/220 (5%)
Query: 27 VNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQMHSEKIIPNTIT 86
++ +KA NT+T+ D+++ + L E ++L++ + P T
Sbjct: 78 LDRRSKANGWVNTVTE--TLSDLIAKKQWLQAL-------EVFDMLREQTFYQ--PKEGT 126
Query: 87 YNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKVI 146
Y L+ L K+G+ + A +L DEM G + Y + L A + + +D +++ K+
Sbjct: 127 YMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMK 186
Query: 147 D-KGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLF 205
QPD+ TY+ LL + +++++ ++ N T N +++G + G F
Sbjct: 187 SFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRF 246
Query: 206 DEALTLMSKM-EDNGCIHDPITFETIISALFEKGENDKAE 244
D+ ++S M C D T I+S G+ D E
Sbjct: 247 DQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMME 286
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 114/221 (51%), Gaps = 28/221 (12%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLL 72
NVV++ +L+ GY +V+ A+++F M + + +S+++M+ G + +++A L
Sbjct: 109 NVVSWTALVKGYVHNGKVDVAESLFWKMPE----KNKVSWTVMLIGFLQDGRIDDACKLY 164
Query: 73 KQMHSEKIIPN--TITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 130
+ +IP+ I S+I GLCK G+V A E+ DEM R +IT+ + +
Sbjct: 165 E------MIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERS----VITWTTMVTGYG 214
Query: 131 KGHHVDKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 190
+ + VD +K+ D + ++ +L G + GRI+DA+E+F+ + K
Sbjct: 215 QNNRVDDA----RKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVI---- 266
Query: 191 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 231
N MI+GL ++G +A + M++ + +++T+I
Sbjct: 267 ACNAMISGLGQKGEIAKARRVFDSMKER----NDASWQTVI 303
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 111/229 (48%), Gaps = 27/229 (11%)
Query: 16 TYNSLMDGYCLVNEVNKAQAVFNTMTQMGVFPDVLSYSIMINGLCKMKMVNEALNLLKQM 75
T N + + ++++A+ +F++ + S++ M+ G M +A L +M
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDS----KSISSWNSMVAGYFANLMPRDARKLFDEM 74
Query: 76 HSEKIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHV 135
N I++N L+ G K G++ A ++ D M R +++++ + + V
Sbjct: 75 PDR----NIISWNGLVSGYMKNGEIDEARKVFDLMPER----NVVSWTALVKGYVHNGKV 126
Query: 136 DKGIALIKKVIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTM 195
D +L K+ +K + ++ ++L G + GRI DA ++++ + K +N +M
Sbjct: 127 DVAESLFWKMPEK----NKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSM 178
Query: 196 INGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 244
I+GLCKEG DEA + +M + IT+ T+++ G+N++ +
Sbjct: 179 IHGLCKEGRVDEAREIFDEMSERSV----ITWTTMVTGY---GQNNRVD 220
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 10/168 (5%)
Query: 13 NVVTYNSLMDGYCLVNEVNKAQAVFNTMTQMG-VFPDVLSYSIMINGLCKMKMVNEALNL 71
+++ +NS++ GY +A VF M G P+ +++ ++ MV E L +
Sbjct: 396 DIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKI 455
Query: 72 LKQMHSE-KIIPNTITYNSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 130
+ M S + P T Y ++D L + G+ + A E++D M V +P D + S L A C
Sbjct: 456 YESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTV--EP-DAAVWGSLLGA-C 511
Query: 131 KGH-HVDKGIALIKKVIDKGIQPDMC-TYNILLDGLCKCGRIKDAQEV 176
+ H +D KK+I+ I+P+ TY +L + GR D E+
Sbjct: 512 RTHSQLDVAEFCAKKLIE--IEPENSGTYILLSNMYASQGRWADVAEL 557