Miyakogusa Predicted Gene

Lj5g3v1209540.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1209540.1 Non Chatacterized Hit- tr|I3SX59|I3SX59_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.32,0,RmlC-like
cupins,RmlC-like cupin domain; Cupin_3,Domain of unknown function
DUF861, cupin-3; no desc,CUFF.55055.1
         (147 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G10300.1 | Symbols:  | RmlC-like cupins superfamily protein |...   173   4e-44
AT3G04300.1 | Symbols:  | RmlC-like cupins superfamily protein |...   120   4e-28
AT4G28703.1 | Symbols:  | RmlC-like cupins superfamily protein |...   109   5e-25
AT4G10280.1 | Symbols:  | RmlC-like cupins superfamily protein |...   107   4e-24
AT4G10290.1 | Symbols:  | RmlC-like cupins superfamily protein |...    84   4e-17
AT2G32180.1 | Symbols: PTAC18 | plastid transcriptionally active...    66   9e-12
AT2G32650.2 | Symbols:  | RmlC-like cupins superfamily protein |...    65   1e-11
AT2G32650.1 | Symbols:  | RmlC-like cupins superfamily protein |...    65   1e-11

>AT4G10300.1 | Symbols:  | RmlC-like cupins superfamily protein |
           chr4:6384564-6385946 FORWARD LENGTH=134
          Length = 134

 Score =  173 bits (438), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 81/103 (78%), Positives = 88/103 (85%), Gaps = 4/103 (3%)

Query: 45  VRAESMSTVIEKQGIKIERNPSESKLTQLGVKQWPKWGCPPSKFPWTYDAKETCYLLEGK 104
           +RAES     EK GI IE+NP ESKLTQLGV+ WPKWGCPPSKFPWTY AKETCYLL+GK
Sbjct: 36  IRAEST----EKLGITIEKNPPESKLTQLGVRSWPKWGCPPSKFPWTYSAKETCYLLQGK 91

Query: 105 VKVTPSGANEAVEIAAGDLVVFPKGMSCTWDVSVAVDKHYLFE 147
           VKV P+G++E VEI AGD VVFPKGMSCTWDVSVAVDKHY FE
Sbjct: 92  VKVYPNGSDEGVEIEAGDFVVFPKGMSCTWDVSVAVDKHYQFE 134


>AT3G04300.1 | Symbols:  | RmlC-like cupins superfamily protein |
           chr3:1140318-1140723 FORWARD LENGTH=96
          Length = 96

 Score =  120 bits (300), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 52/89 (58%), Positives = 66/89 (74%)

Query: 59  IKIERNPSESKLTQLGVKQWPKWGCPPSKFPWTYDAKETCYLLEGKVKVTPSGANEAVEI 118
           I IE NPS  +L+ LGV  WPKW C P K+   ++ +ETCYL++GKVKV P G++E VE 
Sbjct: 3   IVIENNPSSRRLSDLGVMSWPKWSCQPGKYALVFEERETCYLVKGKVKVYPKGSSEFVEF 62

Query: 119 AAGDLVVFPKGMSCTWDVSVAVDKHYLFE 147
            AGDLV  PKG+SCTWDVS+ +DKHY F+
Sbjct: 63  GAGDLVTIPKGLSCTWDVSLFIDKHYKFD 91


>AT4G28703.1 | Symbols:  | RmlC-like cupins superfamily protein |
           chr4:14166365-14166798 FORWARD LENGTH=107
          Length = 107

 Score =  109 bits (273), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 50/97 (51%), Positives = 67/97 (69%), Gaps = 9/97 (9%)

Query: 59  IKIERNPSESKLTQLGVKQWPKWGCPPSKFPWTYDAKETCYLLEGKVKV---------TP 109
           I +E+NPS+++L +L  K WPKWGC P K+   Y+A+E CY+L GKVKV         + 
Sbjct: 8   IIVEQNPSQARLDELKFKSWPKWGCSPGKYHLKYEAEEICYILRGKVKVYPKPPPSSSSD 67

Query: 110 SGANEAVEIAAGDLVVFPKGMSCTWDVSVAVDKHYLF 146
           +     VE  AGD+V FPKG+SCTWDVS++VDKHY+F
Sbjct: 68  AEVEWCVEFGAGDIVTFPKGLSCTWDVSLSVDKHYIF 104


>AT4G10280.1 | Symbols:  | RmlC-like cupins superfamily protein |
           chr4:6375220-6375996 REVERSE LENGTH=140
          Length = 140

 Score =  107 bits (266), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 56/124 (45%), Positives = 71/124 (57%), Gaps = 5/124 (4%)

Query: 27  CVTFPSTRGKLGRRSHLVVRAESMSTVIEKQGIKIERNPSESKLTQLGVKQWPKWGCPPS 86
           CV+F +T  KL  +  +V  +       E  G+KI R  S++KL QLGV  WPKW   PS
Sbjct: 18  CVSFITT--KLNPKEAIVSVSSDSEIPTEIHGVKILRQASDTKLAQLGVASWPKWEGAPS 75

Query: 87  KFPWTYDAKETCYLLEGKVKVTPSGAN---EAVEIAAGDLVVFPKGMSCTWDVSVAVDKH 143
           KFPW +   ET Y +EGKVKV   G +   E  EI  GD+VVFPK M   W+++ AV K 
Sbjct: 76  KFPWEFKKTETIYFMEGKVKVNVDGYDEEEETFEIGKGDVVVFPKDMKVVWEITEAVKKQ 135

Query: 144 YLFE 147
           Y  E
Sbjct: 136 YSLE 139


>AT4G10290.1 | Symbols:  | RmlC-like cupins superfamily protein |
           chr4:6379958-6381720 REVERSE LENGTH=120
          Length = 120

 Score = 84.0 bits (206), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 43/96 (44%), Positives = 55/96 (57%), Gaps = 3/96 (3%)

Query: 55  EKQGIKIERNPSESKLTQLGVKQWPKWGCPPSKFPWTYDAKETCYLLEGKVKVTPSGAN- 113
           E  G+K+ R  S++KL +LGV  W  W   P KFPW +   ET Y +EGK+KV     + 
Sbjct: 16  EIHGVKVMRQTSDAKLAELGVTSWQLWESMPRKFPWKFKKTETMYFVEGKLKVKVEDHHK 75

Query: 114 --EAVEIAAGDLVVFPKGMSCTWDVSVAVDKHYLFE 147
             EA+E  AGDLVVFP+ M+   DV   V K Y  E
Sbjct: 76  EGEALEFVAGDLVVFPQDMNVFVDVIEDVKKRYYRE 111


>AT2G32180.1 | Symbols: PTAC18 | plastid transcriptionally active 18
           | chr2:13672362-13672781 REVERSE LENGTH=139
          Length = 139

 Score = 65.9 bits (159), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 56/109 (51%)

Query: 39  RRSHLVVRAESMSTVIEKQGIKIERNPSESKLTQLGVKQWPKWGCPPSKFPWTYDAKETC 98
           +R+  V   ++   + E   +K+ER  S+ +L +LGV +W  W     K PW +   +  
Sbjct: 26  QRAFRVTCMQTEKPLEELYNVKVERKVSQKRLEELGVSRWSVWKTGKCKLPWDWQVDQLV 85

Query: 99  YLLEGKVKVTPSGANEAVEIAAGDLVVFPKGMSCTWDVSVAVDKHYLFE 147
           Y+ +G+V+V P G+   ++  AGDLV +PK +      +    + Y F+
Sbjct: 86  YIEQGEVRVVPEGSKRYMQFLAGDLVRYPKWLEADLFFNAPYIERYCFK 134


>AT2G32650.2 | Symbols:  | RmlC-like cupins superfamily protein |
           chr2:13851547-13851966 FORWARD LENGTH=139
          Length = 139

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 56/109 (51%)

Query: 39  RRSHLVVRAESMSTVIEKQGIKIERNPSESKLTQLGVKQWPKWGCPPSKFPWTYDAKETC 98
           +R+  V   ++   + E   +K+ER  S+ +L +LGV +W  W     K PW +   +  
Sbjct: 26  QRAFKVTCMQTEKPLEELYNVKVERKVSQKRLEELGVSRWSVWKTGKCKLPWDWQVDQLV 85

Query: 99  YLLEGKVKVTPSGANEAVEIAAGDLVVFPKGMSCTWDVSVAVDKHYLFE 147
           Y+ +G+V+V P G+   ++  AGDLV +PK +      +    + Y F+
Sbjct: 86  YIEQGEVRVVPEGSKRYMQFLAGDLVRYPKWLEADLFFNAPYIERYCFK 134


>AT2G32650.1 | Symbols:  | RmlC-like cupins superfamily protein |
           chr2:13851547-13851966 FORWARD LENGTH=139
          Length = 139

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 56/109 (51%)

Query: 39  RRSHLVVRAESMSTVIEKQGIKIERNPSESKLTQLGVKQWPKWGCPPSKFPWTYDAKETC 98
           +R+  V   ++   + E   +K+ER  S+ +L +LGV +W  W     K PW +   +  
Sbjct: 26  QRAFKVTCMQTEKPLEELYNVKVERKVSQKRLEELGVSRWSVWKTGKCKLPWDWQVDQLV 85

Query: 99  YLLEGKVKVTPSGANEAVEIAAGDLVVFPKGMSCTWDVSVAVDKHYLFE 147
           Y+ +G+V+V P G+   ++  AGDLV +PK +      +    + Y F+
Sbjct: 86  YIEQGEVRVVPEGSKRYMQFLAGDLVRYPKWLEADLFFNAPYIERYCFK 134