Miyakogusa Predicted Gene
- Lj5g3v1208440.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1208440.1 tr|G7L6C0|G7L6C0_MEDTR F-box protein OS=Medicago
truncatula GN=MTR_7g034720 PE=4 SV=1,84.32,0,no description,NULL;
seg,NULL; ATPases associated with a variety of cellula,AAA+ ATPase
domain; FAMI,NODE_62301_length_1316_cov_13.996201.path2.1
(386 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G33290.1 | Symbols: | P-loop containing nucleoside triphosph... 543 e-155
AT1G73170.1 | Symbols: | P-loop containing nucleoside triphosph... 348 3e-96
AT3G10420.2 | Symbols: SPD1 | P-loop containing nucleoside triph... 345 2e-95
AT3G10420.1 | Symbols: SPD1 | P-loop containing nucleoside triph... 344 6e-95
AT1G73170.2 | Symbols: | P-loop containing nucleoside triphosph... 312 2e-85
AT1G33290.2 | Symbols: | P-loop containing nucleoside triphosph... 285 3e-77
>AT1G33290.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:12074125-12075989
FORWARD LENGTH=379
Length = 379
Score = 543 bits (1400), Expect = e-155, Method: Compositional matrix adjust.
Identities = 262/332 (78%), Positives = 299/332 (90%)
Query: 51 DDLQPLLQILPSDLHHNLLNQANRPQLLEVILDLGRYPEARYLGKLGSQYLRNTEVTVKE 110
D+L L+ILP DL H LLN + R QL+EVI+DLGR PEARYLG+ G QYLRN EV+++E
Sbjct: 44 DNLGAFLEILPKDLRHRLLNDSRRNQLVEVIMDLGRPPEARYLGEPGGQYLRNNEVSMEE 103
Query: 111 LEHAQQAVGEFGRDNRAGIEGTLHRISAIRSRNGAIVGLTCRVGRAVSGHIDMVYDLLQY 170
LE AQ+ VGEFG DNRAGIEGTLHRISAIR+R G IVGLTCRVGRAVSGHIDM+YDLL Y
Sbjct: 104 LEDAQELVGEFGADNRAGIEGTLHRISAIRNRKGFIVGLTCRVGRAVSGHIDMLYDLLHY 163
Query: 171 GKNILFVGRPGVGKTTVMREIARVLSDEFNKRVVIVDTSNEIGGDGNIPHAAIGGARRMQ 230
GK+ILFVGRPGVGKTTV+REIARVLSDEF KRVVI+DTSNEIGGDG+IPH+AIGG+RRMQ
Sbjct: 164 GKSILFVGRPGVGKTTVLREIARVLSDEFQKRVVIIDTSNEIGGDGDIPHSAIGGSRRMQ 223
Query: 231 VPEPSMQHSVMIEAVENHMPEVIIVDEIGTVAEAHACRSIAERGIMLIGTAHGEQLENIM 290
VP+PS+QH VMIEAVENHMP+VIIVDEIGT AEA ACRSIAERG+MLIGTAHGEQL+NI+
Sbjct: 224 VPKPSLQHKVMIEAVENHMPQVIIVDEIGTEAEALACRSIAERGVMLIGTAHGEQLQNII 283
Query: 291 KNPTLSDLIGGIASVTLGDAEARARKCQKTILERKAPPTFDFVMEMRDRHYWITHQTDKS 350
KNPTLSDLIGGI +VTLGD EARAR+ QK+ILERKAPPTF F++EMR+R YWI HQT+KS
Sbjct: 284 KNPTLSDLIGGIETVTLGDEEARARRSQKSILERKAPPTFYFLIEMRERDYWIAHQTEKS 343
Query: 351 VDLLLQGKIPQVEVRKRDEKCKVVIEKSKAYD 382
VD+LL+G+ P VEVR+RDE+ KVVIE+ KAYD
Sbjct: 344 VDMLLRGRNPMVEVRRRDEEYKVVIERWKAYD 375
>AT1G73170.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:27511722-27514783
REVERSE LENGTH=666
Length = 666
Score = 348 bits (894), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 176/338 (52%), Positives = 240/338 (71%), Gaps = 4/338 (1%)
Query: 51 DDLQPLLQILPSDLHHNLLNQANRPQLLEVILDLGRYPEARYLGKLGSQYLRNTEVTVKE 110
D+L+ LL ++P ++ L +L+E++LDLGR P AR+ G + + V VK+
Sbjct: 79 DELRRLLALVPEEIRQTLKEHPEISELIEIVLDLGRKPLARFPS--GDFVISDDAVRVKD 136
Query: 111 LEHAQQAVGEFGRDNRAGIEGTLHRISAIRSRNGAIVGLTCRVGRAVSGHIDMVYDLLQY 170
LE A VGEF DNRAGI TLHRISAIR+R G I+GLTCRVGR+V G +++ DL+Q
Sbjct: 137 LEFAVSQVGEFTNDNRAGISRTLHRISAIRNRKGEIIGLTCRVGRSVRGSANLLRDLVQD 196
Query: 171 GKNILFVGRPGVGKTTVMREIARVLSDEFNKRVVIVDTSNEIGGDGNIPHAAIGGARRMQ 230
G ++L +G PGVGKTT++RE+AR+L +++ KRV+IVDTSNEIGGDG+IPH IG ARRMQ
Sbjct: 197 GNSLLLIGPPGVGKTTMIREVARMLGNDYEKRVMIVDTSNEIGGDGDIPHPGIGNARRMQ 256
Query: 231 VPEPSMQHSVMIEAVENHMPEVIIVDEIGTVAEAHACRSIAERGIMLIGTAHGEQLENIM 290
VP +QH V+IEAVENHMP+VI++DEIGT EA A +IAERGI L+ TAHG +EN++
Sbjct: 257 VPNSDIQHKVLIEAVENHMPQVIVIDEIGTKLEAIAASTIAERGIQLVATAHGATIENLI 316
Query: 291 KNPTLSDLIGGIASVTLGDAEARARKCQKTILERKAPPTFDFVMEMRDRHYWITHQT-DK 349
KNP+L L+GG+ SVTLGD EA R QKT+LERK P TF+ E+ + H++ +
Sbjct: 317 KNPSLDLLVGGVQSVTLGDEEATRRGGQKTVLERKGPSTFNCGAEIVSKTEVRVHRSLEA 376
Query: 350 SVDLLLQGKIPQVEVRK-RDEKCKVVIEKSKAYDKCQI 386
+VD +L G++P VE+RK + +V++EK D+ +
Sbjct: 377 TVDAILAGRLPNVEIRKIKSHGVEVIMEKEPFIDEKTV 414
>AT3G10420.2 | Symbols: SPD1 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr3:3239307-3242274 FORWARD LENGTH=684
Length = 684
Score = 345 bits (886), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 178/316 (56%), Positives = 226/316 (71%), Gaps = 3/316 (0%)
Query: 52 DLQPLLQILPSDLHHNLLNQANRPQLLEVILDLGRYPEARYLGKLGSQYLRNTEVTVKEL 111
+L L+ILP L+ +L+EV++DLGR P AR+ G + VT ++L
Sbjct: 96 ELDAFLEILPPATRKELVKHEAIEELIEVVMDLGRKPLARFPS--GDWVISEQPVTHQDL 153
Query: 112 EHAQQAVGEFGRDNRAGIEGTLHRISAIRSRNGAIVGLTCRVGRAVSGHIDMVYDLLQYG 171
E A VG+F DNR+GI+ +LHRISAIR+R ++GLTCRVGR VSG +++ DL++ G
Sbjct: 154 ELAVSKVGDFSDDNRSGIDRSLHRISAIRNRKLQVIGLTCRVGRVVSGSAEIIRDLIEGG 213
Query: 172 KNILFVGRPGVGKTTVMREIARVLSDEFNKRVVIVDTSNEIGGDGNIPHAAIGGARRMQV 231
+IL +G PGVGKTT++REIAR+L+DE KRVVIVDTSNEIGGDG++PH+ IG ARRMQV
Sbjct: 214 GSILVIGSPGVGKTTLIREIARMLADEHRKRVVIVDTSNEIGGDGDVPHSGIGRARRMQV 273
Query: 232 PEPSMQHSVMIEAVENHMPEVIIVDEIGTVAEAHACRSIAERGIMLIGTAHGEQLENIMK 291
P ++QH VMIEAVENHMPE II+DEIGT EA A +IA+RG+ L+ TAHG ++NI+K
Sbjct: 274 PNVNLQHDVMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVATAHGMTIDNIIK 333
Query: 292 NPTLSDLIGGIASVTLGDAEARARKCQKTILERKAPPTFDFVMEMRDRHYWITHQ-TDKS 350
NP+L LIGGI SVTLGD EAR RK QKTILERK PPTF +EM R HQ D +
Sbjct: 334 NPSLQILIGGIESVTLGDEEARKRKVQKTILERKGPPTFTCAVEMISRTECRVHQRLDVT 393
Query: 351 VDLLLQGKIPQVEVRK 366
VD +L GK E+R+
Sbjct: 394 VDAILAGKSAPFEIRQ 409
>AT3G10420.1 | Symbols: SPD1 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr3:3239307-3241571 FORWARD LENGTH=547
Length = 547
Score = 344 bits (883), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 178/316 (56%), Positives = 226/316 (71%), Gaps = 3/316 (0%)
Query: 52 DLQPLLQILPSDLHHNLLNQANRPQLLEVILDLGRYPEARYLGKLGSQYLRNTEVTVKEL 111
+L L+ILP L+ +L+EV++DLGR P AR+ G + VT ++L
Sbjct: 96 ELDAFLEILPPATRKELVKHEAIEELIEVVMDLGRKPLARFPS--GDWVISEQPVTHQDL 153
Query: 112 EHAQQAVGEFGRDNRAGIEGTLHRISAIRSRNGAIVGLTCRVGRAVSGHIDMVYDLLQYG 171
E A VG+F DNR+GI+ +LHRISAIR+R ++GLTCRVGR VSG +++ DL++ G
Sbjct: 154 ELAVSKVGDFSDDNRSGIDRSLHRISAIRNRKLQVIGLTCRVGRVVSGSAEIIRDLIEGG 213
Query: 172 KNILFVGRPGVGKTTVMREIARVLSDEFNKRVVIVDTSNEIGGDGNIPHAAIGGARRMQV 231
+IL +G PGVGKTT++REIAR+L+DE KRVVIVDTSNEIGGDG++PH+ IG ARRMQV
Sbjct: 214 GSILVIGSPGVGKTTLIREIARMLADEHRKRVVIVDTSNEIGGDGDVPHSGIGRARRMQV 273
Query: 232 PEPSMQHSVMIEAVENHMPEVIIVDEIGTVAEAHACRSIAERGIMLIGTAHGEQLENIMK 291
P ++QH VMIEAVENHMPE II+DEIGT EA A +IA+RG+ L+ TAHG ++NI+K
Sbjct: 274 PNVNLQHDVMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVATAHGMTIDNIIK 333
Query: 292 NPTLSDLIGGIASVTLGDAEARARKCQKTILERKAPPTFDFVMEMRDRHYWITHQ-TDKS 350
NP+L LIGGI SVTLGD EAR RK QKTILERK PPTF +EM R HQ D +
Sbjct: 334 NPSLQILIGGIESVTLGDEEARKRKVQKTILERKGPPTFTCAVEMISRTECRVHQRLDVT 393
Query: 351 VDLLLQGKIPQVEVRK 366
VD +L GK E+R+
Sbjct: 394 VDAILAGKSAPFEIRQ 409
>AT1G73170.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:27511722-27514395
REVERSE LENGTH=538
Length = 538
Score = 312 bits (800), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 153/271 (56%), Positives = 203/271 (74%), Gaps = 2/271 (0%)
Query: 118 VGEFGRDNRAGIEGTLHRISAIRSRNGAIVGLTCRVGRAVSGHIDMVYDLLQYGKNILFV 177
VGEF DNRAGI TLHRISAIR+R G I+GLTCRVGR+V G +++ DL+Q G ++L +
Sbjct: 16 VGEFTNDNRAGISRTLHRISAIRNRKGEIIGLTCRVGRSVRGSANLLRDLVQDGNSLLLI 75
Query: 178 GRPGVGKTTVMREIARVLSDEFNKRVVIVDTSNEIGGDGNIPHAAIGGARRMQVPEPSMQ 237
G PGVGKTT++RE+AR+L +++ KRV+IVDTSNEIGGDG+IPH IG ARRMQVP +Q
Sbjct: 76 GPPGVGKTTMIREVARMLGNDYEKRVMIVDTSNEIGGDGDIPHPGIGNARRMQVPNSDIQ 135
Query: 238 HSVMIEAVENHMPEVIIVDEIGTVAEAHACRSIAERGIMLIGTAHGEQLENIMKNPTLSD 297
H V+IEAVENHMP+VI++DEIGT EA A +IAERGI L+ TAHG +EN++KNP+L
Sbjct: 136 HKVLIEAVENHMPQVIVIDEIGTKLEAIAASTIAERGIQLVATAHGATIENLIKNPSLDL 195
Query: 298 LIGGIASVTLGDAEARARKCQKTILERKAPPTFDFVMEMRDRHYWITHQT-DKSVDLLLQ 356
L+GG+ SVTLGD EA R QKT+LERK P TF+ E+ + H++ + +VD +L
Sbjct: 196 LVGGVQSVTLGDEEATRRGGQKTVLERKGPSTFNCGAEIVSKTEVRVHRSLEATVDAILA 255
Query: 357 GKIPQVEVRK-RDEKCKVVIEKSKAYDKCQI 386
G++P VE+RK + +V++EK D+ +
Sbjct: 256 GRLPNVEIRKIKSHGVEVIMEKEPFIDEKTV 286
>AT1G33290.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:12074125-12075989
FORWARD LENGTH=303
Length = 303
Score = 285 bits (730), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 138/175 (78%), Positives = 155/175 (88%)
Query: 51 DDLQPLLQILPSDLHHNLLNQANRPQLLEVILDLGRYPEARYLGKLGSQYLRNTEVTVKE 110
D+L L+ILP DL H LLN + R QL+EVI+DLGR PEARYLG+ G QYLRN EV+++E
Sbjct: 44 DNLGAFLEILPKDLRHRLLNDSRRNQLVEVIMDLGRPPEARYLGEPGGQYLRNNEVSMEE 103
Query: 111 LEHAQQAVGEFGRDNRAGIEGTLHRISAIRSRNGAIVGLTCRVGRAVSGHIDMVYDLLQY 170
LE AQ+ VGEFG DNRAGIEGTLHRISAIR+R G IVGLTCRVGRAVSGHIDM+YDLL Y
Sbjct: 104 LEDAQELVGEFGADNRAGIEGTLHRISAIRNRKGFIVGLTCRVGRAVSGHIDMLYDLLHY 163
Query: 171 GKNILFVGRPGVGKTTVMREIARVLSDEFNKRVVIVDTSNEIGGDGNIPHAAIGG 225
GK+ILFVGRPGVGKTTV+REIARVLSDEF KRVVI+DTSNEIGGDG+IPH+AIGG
Sbjct: 164 GKSILFVGRPGVGKTTVLREIARVLSDEFQKRVVIIDTSNEIGGDGDIPHSAIGG 218
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 61/84 (72%), Positives = 74/84 (88%)
Query: 299 IGGIASVTLGDAEARARKCQKTILERKAPPTFDFVMEMRDRHYWITHQTDKSVDLLLQGK 358
IGGI +VTLGD EARAR+ QK+ILERKAPPTF F++EMR+R YWI HQT+KSVD+LL+G+
Sbjct: 216 IGGIETVTLGDEEARARRSQKSILERKAPPTFYFLIEMRERDYWIAHQTEKSVDMLLRGR 275
Query: 359 IPQVEVRKRDEKCKVVIEKSKAYD 382
P VEVR+RDE+ KVVIE+ KAYD
Sbjct: 276 NPMVEVRRRDEEYKVVIERWKAYD 299