Miyakogusa Predicted Gene

Lj5g3v1208090.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1208090.1 tr|B9HKC1|B9HKC1_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_832825 PE=4
SV=1,85.04,0,seg,NULL; Methyltransf_11,Methyltransferase type 11;
CHLOROPLAST INNER ENVELOPE PROTEIN,NULL; METHYL,CUFF.55024.1
         (340 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G63410.1 | Symbols: APG1, VTE3, IEP37, E37 | S-adenosyl-L-met...   473   e-134

>AT3G63410.1 | Symbols: APG1, VTE3, IEP37, E37 |
           S-adenosyl-L-methionine-dependent methyltransferases
           superfamily protein | chr3:23415816-23417002 REVERSE
           LENGTH=338
          Length = 338

 Score =  473 bits (1218), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 242/350 (69%), Positives = 270/350 (77%), Gaps = 22/350 (6%)

Query: 1   MASLMLSGAENTKLISGIAPSGLGSVGLSFHKSCFFKKSVVSYGNKYRARTLTPRCSVSS 60
           MASLML+GA          P GLGS G + H     + +++S       RT TPR SV++
Sbjct: 1   MASLMLNGAITF-------PKGLGSPGSNLHARSIPRPTLLSV-----TRTSTPRLSVAT 48

Query: 61  ---------FRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDEALEPADLF 111
                     RP++QPRFIQHKKEA+WFYRFLSIVYDHVINPGHWTEDMRD+ALEPADL 
Sbjct: 49  RCSSSSVSSSRPSAQPRFIQHKKEAYWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLS 108

Query: 112 DRNMRVVDVXXXXXXXXXXIVKHVDAKNVTILDQSPHQXXXXXXXXXXXXXXVIEGDAED 171
             +MRVVDV          IVK V AKNVTILDQSPHQ              ++EGDAED
Sbjct: 109 HPDMRVVDVGGGTGFTTLGIVKTVKAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAED 168

Query: 172 LPFPTDYAERYVSAGSIEYWPDPQRGIKEAYRVLRIGGKACIIGPVYPTFWLSRFFADMW 231
           LPFPTDYA+RYVSAGSIEYWPDPQRGI+EAYRVL+IGGKAC+IGPVYPTFWLSRFF+D+W
Sbjct: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKIGGKACLIGPVYPTFWLSRFFSDVW 228

Query: 232 MLFPKEEEYIEWFKKAGFKDVKLKRIGPKWYRGVRRHGLIMGCSVTGVKPLSGDSPLKLG 291
           MLFPKEEEYIEWFK AGFKDV+LKRIGPKWYRGVRRHGLIMGCSVTGVKP SGDSPL+LG
Sbjct: 229 MLFPKEEEYIEWFKNAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQLG 288

Query: 292 PKVEDVEKPV-NPLLFLSRLILGAIAATYYVLVPIYMWIKDQIVPKGMPI 340
           PK EDVEKPV NP  FL R +LG +AA ++VL+PIYMWIKDQIVPK  PI
Sbjct: 289 PKEEDVEKPVNNPFSFLGRFLLGTLAAAWFVLIPIYMWIKDQIVPKDQPI 338