Miyakogusa Predicted Gene

Lj5g3v1208010.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1208010.2 tr|B6U329|B6U329_MAIZE AGG2 OS=Zea mays PE=4
SV=1,57.47,1e-18,coiled-coil,NULL; seg,NULL; G-gamma,G-protein
gamma-like domain,CUFF.55019.2
         (106 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G22942.1 | Symbols: AGG2 | G-protein gamma subunit 2 | chr3:8...    90   3e-19
AT3G63420.2 | Symbols: AGG1, ATAGG1, GG1 | Ggamma-subunit 1 | ch...    77   2e-15
AT3G63420.1 | Symbols: AGG1, ATAGG1, GG1 | Ggamma-subunit 1 | ch...    77   2e-15

>AT3G22942.1 | Symbols: AGG2 | G-protein gamma subunit 2 |
           chr3:8134475-8135667 FORWARD LENGTH=100
          Length = 100

 Score = 90.1 bits (222), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 45/106 (42%), Positives = 62/106 (58%), Gaps = 6/106 (5%)

Query: 1   MQSGGPESAKPMTHRTHSLSSADTRGKHRVHAELKRTXXXXXXXXXXXXXXXXXXXXSTS 60
           M++G   S+  ++ R       DTRGKHR+ AELKR                     S S
Sbjct: 1   MEAGSSNSSGQLSGRV-----VDTRGKHRIQAELKRLEQEARFLEEELEQLEKMDNASAS 55

Query: 61  CKEMISNVEARPDPLLPLTAGPVSPSWDKWFEGPQDSKSCCRCSIL 106
           CKE + +V+++PDPLLP T GPV+ +WD+WFEGP+++K C  CSIL
Sbjct: 56  CKEFLDSVDSKPDPLLPETTGPVNATWDQWFEGPKEAKRCG-CSIL 100


>AT3G63420.2 | Symbols: AGG1, ATAGG1, GG1 | Ggamma-subunit 1 |
           chr3:23417383-23418405 FORWARD LENGTH=98
          Length = 98

 Score = 77.4 bits (189), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 36/81 (44%), Positives = 45/81 (55%), Gaps = 1/81 (1%)

Query: 26  GKHRVHAELKRTXXXXXXXXXXXXXXXXXXXXSTSCKEMISNVEARPDPLLPLTAGPVSP 85
           GKHR+ AEL R                     ST C+E++S +E  PDPLLPLT GP++ 
Sbjct: 19  GKHRILAELARVEQEVAFLEKELKEVENTDIVSTVCEELLSVIEKGPDPLLPLTNGPLNL 78

Query: 86  SWDKWFEGPQDSKSCCRCSIL 106
            WD+WFEGP   +  CRC IL
Sbjct: 79  GWDRWFEGPNGGEG-CRCLIL 98


>AT3G63420.1 | Symbols: AGG1, ATAGG1, GG1 | Ggamma-subunit 1 |
           chr3:23417383-23418405 FORWARD LENGTH=98
          Length = 98

 Score = 77.4 bits (189), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 36/81 (44%), Positives = 45/81 (55%), Gaps = 1/81 (1%)

Query: 26  GKHRVHAELKRTXXXXXXXXXXXXXXXXXXXXSTSCKEMISNVEARPDPLLPLTAGPVSP 85
           GKHR+ AEL R                     ST C+E++S +E  PDPLLPLT GP++ 
Sbjct: 19  GKHRILAELARVEQEVAFLEKELKEVENTDIVSTVCEELLSVIEKGPDPLLPLTNGPLNL 78

Query: 86  SWDKWFEGPQDSKSCCRCSIL 106
            WD+WFEGP   +  CRC IL
Sbjct: 79  GWDRWFEGPNGGEG-CRCLIL 98