Miyakogusa Predicted Gene

Lj5g3v1206650.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1206650.2 tr|B9IQW0|B9IQW0_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_915042 PE=4
SV=1,29.67,0.000000000000009,FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.55004.2
         (248 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G43745.1 | Symbols:  | Protein of unknown function (DUF1012) ...   350   7e-97
AT5G02940.1 | Symbols:  | Protein of unknown function (DUF1012) ...   340   6e-94
AT5G49960.1 | Symbols:  | unknown protein; CONTAINS InterPro DOM...    62   3e-10

>AT5G43745.1 | Symbols:  | Protein of unknown function (DUF1012) |
           chr5:17569435-17574954 REVERSE LENGTH=817
          Length = 817

 Score =  350 bits (897), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 173/249 (69%), Positives = 209/249 (83%), Gaps = 2/249 (0%)

Query: 1   MIQEYDNYLGPGSVLEILSDTPINDRIIRESKISGPNKLKNVRVSHRIGNPMDYDILKET 60
           MI+E+DNYLGPGS +EILSD  + DR  R     G  K+KN++VSH++GNP++YD LK+T
Sbjct: 570 MIEEFDNYLGPGSSMEILSDVSLEDRR-RVGDSIGSVKIKNIQVSHKVGNPLNYDTLKQT 628

Query: 61  ILNIQSSLKK-EDIPLSIAVIPDRDWLLGDPSKADKLSAFSLLLAENICNQVGVKVHNLV 119
           I+ ++S  +K ++IPL+I VI DRDWLLGDPS+ADK SA+SLLLAE+ICN++GVKVHNL 
Sbjct: 629 IMRMKSKYRKGKNIPLTILVISDRDWLLGDPSRADKQSAYSLLLAESICNKLGVKVHNLA 688

Query: 120 AEIVDSKLGKQITRIKPSVTYIAAEEIMSLVTAQVTENSELNEVWKDVLNADGDEIYVKD 179
           +EIVDSKLGKQIT +KPS+T+IAAEE+MSLVTAQV ENSELNEVWKD+L+ADGDEIYVKD
Sbjct: 689 SEIVDSKLGKQITGLKPSLTFIAAEEVMSLVTAQVAENSELNEVWKDILDADGDEIYVKD 748

Query: 180 IGLYMKEGENPSFTELSERAYLRREVAIGYXXXXXXXXXXXXXSEPLSLEMTDSLIVISE 239
           + LYMKEGENPSFTELSERA+LRREVAIGY             +EPLSLEM DSLIVISE
Sbjct: 749 VELYMKEGENPSFTELSERAWLRREVAIGYIKGGKKMINPVPKNEPLSLEMDDSLIVISE 808

Query: 240 LEGEQPVVL 248
           LEG+QP+ L
Sbjct: 809 LEGDQPITL 817


>AT5G02940.1 | Symbols:  | Protein of unknown function (DUF1012) |
           chr5:684671-689674 REVERSE LENGTH=813
          Length = 813

 Score =  340 bits (871), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 171/250 (68%), Positives = 207/250 (82%), Gaps = 3/250 (1%)

Query: 1   MIQEYDNYLGPGSVLEILSDTPINDRIIRESKISGPNKLKNVRVSHRIGNPMDYDILKET 60
           MI+E+D+YLGPGS LEILSD P+ DR   +  I+   K+KN++VSH +GN MDYD LKE+
Sbjct: 565 MIKEFDSYLGPGSSLEILSDVPLEDRRGVDQSIA-TGKIKNIQVSHSVGNHMDYDTLKES 623

Query: 61  ILNIQSSLKK--EDIPLSIAVIPDRDWLLGDPSKADKLSAFSLLLAENICNQVGVKVHNL 118
           I+++Q+  +K  EDI L+I VI DRD LLGDPS+ADK SA++LLLAE ICN++GVKVHNL
Sbjct: 624 IMHMQNKYEKGEEDIRLTIVVISDRDLLLGDPSRADKQSAYTLLLAETICNKLGVKVHNL 683

Query: 119 VAEIVDSKLGKQITRIKPSVTYIAAEEIMSLVTAQVTENSELNEVWKDVLNADGDEIYVK 178
            +EIVD+KLGKQITR+KPS+T+IAAEE+MSLVTAQV ENSELNEVWKD+L+A+GDEIYVK
Sbjct: 684 ASEIVDTKLGKQITRLKPSLTFIAAEEVMSLVTAQVAENSELNEVWKDILDAEGDEIYVK 743

Query: 179 DIGLYMKEGENPSFTELSERAYLRREVAIGYXXXXXXXXXXXXXSEPLSLEMTDSLIVIS 238
           DI LYMKEGENPSFTELSERA+LRREVAIGY             +EP+SLEM DSLIVIS
Sbjct: 744 DIELYMKEGENPSFTELSERAWLRREVAIGYIKGGKKIINPVPKTEPVSLEMEDSLIVIS 803

Query: 239 ELEGEQPVVL 248
           ELEG+Q + L
Sbjct: 804 ELEGDQVITL 813


>AT5G49960.1 | Symbols:  | unknown protein; CONTAINS InterPro
           DOMAIN/s: Protein of unknown function DUF1012
           (InterPro:IPR010420); BEST Arabidopsis thaliana protein
           match is: Protein of unknown function (DUF1012)
           (TAIR:AT5G02940.1); Has 1807 Blast hits to 1807 proteins
           in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
           Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes
           - 339 (source: NCBI BLink). | chr5:20324173-20327687
           REVERSE LENGTH=824
          Length = 824

 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 108/230 (46%), Gaps = 25/230 (10%)

Query: 1   MIQEYDNYLGPGSVLEILSDTPINDRIIRESKIS--GPN--KLKNVRVSHRIGNPMDYDI 56
           MI+  +  L PGS L + ++ P  +R   E K++  G N  KL N+++ HR GN +    
Sbjct: 565 MIKVLEALLAPGSELWMFNEVPDQER---EKKLTDAGLNISKLVNIKLVHRQGNAVIRRH 621

Query: 57  LKETILNIQSS---LKKEDIPLSIAVIPDRDW----LLGD------PSKADKLSAFSLLL 103
           L+   L    S   L ++ +  SI     R      L+ D      P K  K SA  +  
Sbjct: 622 LESLPLETFDSILILAEQSLENSIVHSDSRSLATLLLIRDIQSKRLPYKDAKSSALRISG 681

Query: 104 AENIC----NQVGVKVHNLVAEIVDSKLGKQITRIKPSVTYIAAEEIMSLVTAQVTENSE 159
             N C     Q       +++EI+DS+  K +  +     Y+ + E++S+  A V E+ +
Sbjct: 682 FPNCCWIRKMQQASDKSIVISEILDSR-TKNLVSVSRISDYVLSNELVSMALAMVAEDKQ 740

Query: 160 LNEVWKDVLNADGDEIYVKDIGLYMKEGENPSFTELSERAYLRREVAIGY 209
           +N V K++    G+E+ ++    Y+ + E   F ++  RA  R+E+ IGY
Sbjct: 741 INRVLKELFAEKGNELCIRPAEFYIYDQEEVCFYDIMRRARQRQEIIIGY 790