Miyakogusa Predicted Gene

Lj5g3v1206650.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1206650.1 Non Chatacterized Hit- tr|Q570E0|Q570E0_ARATH
Putative uncharacterized protein At5g02940
OS=Arabidop,57.78,1e-18,DUF1012,CASTOR/POLLUX/SYM8 ion channels;
FAMILY NOT NAMED,NULL; seg,NULL,CUFF.55004.1
         (367 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G43745.1 | Symbols:  | Protein of unknown function (DUF1012) ...   393   e-109
AT5G02940.1 | Symbols:  | Protein of unknown function (DUF1012) ...   386   e-107
AT5G49960.1 | Symbols:  | unknown protein; CONTAINS InterPro DOM...    92   5e-19

>AT5G43745.1 | Symbols:  | Protein of unknown function (DUF1012) |
           chr5:17569435-17574954 REVERSE LENGTH=817
          Length = 817

 Score =  393 bits (1009), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 203/361 (56%), Positives = 253/361 (70%), Gaps = 8/361 (2%)

Query: 1   MSDLPRKQIDRIADNIAKDLNHIDVXXXXXXXXXXXXFEXXXXXXXXXXXXLPTKGERFE 60
           MSD PRKQ+D++A+  +KD NHID+            FE            LPTKG+R+E
Sbjct: 304 MSDTPRKQMDKLAEAYSKDFNHIDILTKSCSLNLTKSFERAAASMARAIIILPTKGDRYE 363

Query: 61  VDTDAFLSVLALQPIPQMDSVPTIVEVSSSKTCELLKSISALKVEPVENVTSKLFVQCSR 120
           VDTDAFLSVLALQPI +M+S+PTIVEVSS  T +LLKSIS LKVEPVENVTSKLFVQCSR
Sbjct: 364 VDTDAFLSVLALQPIQKMESIPTIVEVSSPNTYDLLKSISGLKVEPVENVTSKLFVQCSR 423

Query: 121 QKGLVKIYRHLLNYRKNVFNLCSLPNLEGMTYRQIRHRLHEAVVCGLYRSGRIYFHPNDD 180
           QK L+KIYRHLLNY KNVFNLCS PNL G  YRQ+R    E VVCGL R G++ FHPND+
Sbjct: 424 QKDLIKIYRHLLNYSKNVFNLCSFPNLVGTKYRQLRLGFQEVVVCGLLRDGKVNFHPNDN 483

Query: 181 EILQQTDKVLFIASLKDTKMPGLVPPNLKEGKNGIHNEELLEKDVDYAIERSKLRLANIV 240
           E L +TDK+LFIA L + K   L+  ++K     + N  +         E+ + RL+ I+
Sbjct: 484 EELMETDKLLFIAPL-NWKKKQLLYTDMK-----LENITVPTDTRKQVFEKKRSRLSKII 537

Query: 241 KRPNRSGSKASDGSLGPKECVLLLGWRHDVVDMIQEYDNYLGPGSVLEILSDTPINDRII 300
            RP +S SK SD   GP E +LLLGWR DVV MI+E+DNYLGPGS +EILSD  + DR  
Sbjct: 538 MRPRKSLSKGSDSVKGPTESILLLGWRGDVVQMIEEFDNYLGPGSSMEILSDVSLEDR-R 596

Query: 301 RESKISGPNKLKNVRVSHRIGNPMDYDILKETILNIQSSLKK-EDIPLSIAVIPDRDWLL 359
           R     G  K+KN++VSH++GNP++YD LK+TI+ ++S  +K ++IPL+I VI DRDWLL
Sbjct: 597 RVGDSIGSVKIKNIQVSHKVGNPLNYDTLKQTIMRMKSKYRKGKNIPLTILVISDRDWLL 656

Query: 360 G 360
           G
Sbjct: 657 G 657


>AT5G02940.1 | Symbols:  | Protein of unknown function (DUF1012) |
           chr5:684671-689674 REVERSE LENGTH=813
          Length = 813

 Score =  386 bits (992), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 202/362 (55%), Positives = 251/362 (69%), Gaps = 10/362 (2%)

Query: 1   MSDLPRKQIDRIADNIAKDLNHIDVXXXXXXXXXXXXFEXXXXXXXXXXXXLPTKGERFE 60
           MSD PRK++D++A+  AKD + +D+            FE            LPTKG+R+E
Sbjct: 300 MSDTPRKEMDKLAEAYAKDFDQLDILTKSCSLNMTKSFERAAACMARAIIILPTKGDRYE 359

Query: 61  VDTDAFLSVLALQPIPQMDSVPTIVEVSSSKTCELLKSISALKVEPVENVTSKLFVQCSR 120
           VDTDAFLSVLAL+PI +M+S+PTIVEVSSS   +LLKSIS LKVEPVEN TSKLFVQCSR
Sbjct: 360 VDTDAFLSVLALEPIQKMESIPTIVEVSSSNMYDLLKSISGLKVEPVENSTSKLFVQCSR 419

Query: 121 QKGLVKIYRHLLNYRKNVFNLCSLPNLEGMTYRQIRHRLHEAVVCGLYRSGRIYFHPNDD 180
           QK L+KIYRHLLNY KNVFNLCS PNL GM YRQ+R    E VVCG+ R G++ FHPNDD
Sbjct: 420 QKDLIKIYRHLLNYSKNVFNLCSFPNLTGMKYRQLRLGFQEVVVCGILRDGKVNFHPNDD 479

Query: 181 EILQQTDKVLFIASLKDTKMPGLVPPNLKEGKNGIHNEELLEKDVDYAIERSKLRLANIV 240
           E L +TDK+LFIA LK       +  ++K     +   +   K V    E  K RL  I+
Sbjct: 480 EELMETDKLLFIAPLK----KDFLYTDMKTENMTVDETDDTRKQV---YEEKKSRLEKII 532

Query: 241 KRPNRSGSKASDGSLGPKECVLLLGWRHDVVDMIQEYDNYLGPGSVLEILSDTPINDRII 300
            RP++S SK SD   GPKE +LLLGWR DVV+MI+E+D+YLGPGS LEILSD P+ DR  
Sbjct: 533 TRPSKSLSKGSDSFKGPKESILLLGWRGDVVNMIKEFDSYLGPGSSLEILSDVPLEDRRG 592

Query: 301 RESKISGPNKLKNVRVSHRIGNPMDYDILKETILNIQSSLKK--EDIPLSIAVIPDRDWL 358
            +  I+   K+KN++VSH +GN MDYD LKE+I+++Q+  +K  EDI L+I VI DRD L
Sbjct: 593 VDQSIA-TGKIKNIQVSHSVGNHMDYDTLKESIMHMQNKYEKGEEDIRLTIVVISDRDLL 651

Query: 359 LG 360
           LG
Sbjct: 652 LG 653


>AT5G49960.1 | Symbols:  | unknown protein; CONTAINS InterPro
           DOMAIN/s: Protein of unknown function DUF1012
           (InterPro:IPR010420); BEST Arabidopsis thaliana protein
           match is: Protein of unknown function (DUF1012)
           (TAIR:AT5G02940.1); Has 1807 Blast hits to 1807 proteins
           in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
           Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes
           - 339 (source: NCBI BLink). | chr5:20324173-20327687
           REVERSE LENGTH=824
          Length = 824

 Score = 92.4 bits (228), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 123/273 (45%), Gaps = 51/273 (18%)

Query: 62  DTDAFLSVLALQPIPQMDSVPTIVEVSSSKTCELLKSISALKVEPV--ENVTSKLFVQCS 119
           D  A   VL+L  + +      +VE+       L+K +   ++E V   +V  +L +QC+
Sbjct: 386 DARALRVVLSLTGVKEGWKGHVVVEMCDLDNEPLVKLVGGERIETVVAHDVIGRLMIQCA 445

Query: 120 RQKGLVKIYRHLLNYRKNVFNLCSLPNLEGMTYRQIRHRLHEAVVCG--LYRSGRIYFHP 177
            Q GL +I+  +L +    F +   P L+G  +  +      A+ CG  +   G+I  +P
Sbjct: 446 LQPGLAQIWEDILGFENAEFYIKKWPQLDGYCFEDVLISFPNAIPCGVKVAADGKIVLNP 505

Query: 178 NDDEILQQTDKVLFIASLKDTKMPGLVPPNLKEGKNGIHNEELLEKDVDYAIERSKLRLA 237
           +DD +L++ D++L IA   DT  PG +P                           ++R+ 
Sbjct: 506 SDDYVLKEGDEILVIAEDDDTYAPGSLP---------------------------EVRMC 538

Query: 238 NIVKRPNRSGSKASDGSLGPK--ECVLLLGWRHDVVDMIQEYDNYLGPGSVLEILSDTPI 295
           +  K  +            PK  E +L  GWR D+ DMI+  +  L PGS L + ++ P 
Sbjct: 539 HFPKMQD-----------PPKYPEKILFCGWRRDIDDMIKVLEALLAPGSELWMFNEVPD 587

Query: 296 NDRIIRESKISGP----NKLKNVRVSHRIGNPM 324
            +   RE K++      +KL N+++ HR GN +
Sbjct: 588 QE---REKKLTDAGLNISKLVNIKLVHRQGNAV 617