Miyakogusa Predicted Gene
- Lj5g3v1204350.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1204350.1 Non Chatacterized Hit- tr|I1IGS5|I1IGS5_BRADI
Uncharacterized protein OS=Brachypodium distachyon GN=,43.12,1e-18,
,CUFF.54971.1
(194 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G30580.1 | Symbols: DRIP2 | DREB2A-interacting protein 2 | ch... 142 2e-34
AT1G06770.1 | Symbols: DRIP1 | DREB2A-interacting protein 1 | ch... 127 5e-30
AT1G06770.2 | Symbols: DRIP1 | DREB2A-interacting protein 1 | ch... 127 6e-30
AT3G23060.1 | Symbols: | RING/U-box superfamily protein | chr3:... 114 3e-26
AT5G13250.1 | Symbols: | RING finger protein | chr5:4234486-424... 69 2e-12
AT1G28080.1 | Symbols: | RING finger protein | chr1:9789826-979... 56 1e-08
>AT2G30580.1 | Symbols: DRIP2 | DREB2A-interacting protein 2 |
chr2:13026444-13030363 FORWARD LENGTH=420
Length = 420
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 118/191 (61%), Gaps = 14/191 (7%)
Query: 10 LVDSSDNDSQVSEVEVKTH---C---HQINNSGDQNEFPPPKLNTFDLNQLHITEERTAK 63
L ++S ND Q S+ + K H C +I+N+GD P T L + T + +
Sbjct: 231 LGNASHNDVQGSKTKTKDHKRKCKLEEEISNNGD-----PTTSETATLKRTRRTRRKRSS 285
Query: 64 ISEDLNVPAQP-EIDLNSESSKAFGPIWFSLVASQEKEVGARLPQITSCYIRVRDGSLPV 122
D +P P L E + G +WFSLVAS +E A LPQI + Y+R+RDG++PV
Sbjct: 286 TFGDSRIPLLPGAASLKQE--RRNGHVWFSLVASSNQEGEASLPQIPANYLRIRDGNIPV 343
Query: 123 SFIKKYLVKKLYLASETEVEISLQGQPVLSSWQLQNLVDFWLQTVPANERIQTSIGSSAK 182
SFI+KYL++KL L SE EVEI+ G+PV+ + QL +LVD WL+T ++R+ SIGSSAK
Sbjct: 344 SFIQKYLMRKLDLKSEDEVEITCMGEPVIPTLQLHSLVDLWLETTSKHQRVAASIGSSAK 403
Query: 183 DFVMVLKYSRK 193
+FVMVL YSRK
Sbjct: 404 EFVMVLVYSRK 414
>AT1G06770.1 | Symbols: DRIP1 | DREB2A-interacting protein 1 |
chr1:2079222-2081707 REVERSE LENGTH=421
Length = 421
Score = 127 bits (318), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 103/163 (63%), Gaps = 9/163 (5%)
Query: 33 NNSGDQNEFPPPKLNTFDLNQLHITEERTAK--ISEDLNVPAQPEIDLNSESSKAFGPIW 90
+N+GD P T ++ T+ + + + + N+P QP+ + +++ + GP+W
Sbjct: 260 SNNGD-----PTTSETVTPKRMRTTQRKRSATTLGDSRNLP-QPD-ESSAKQERRNGPVW 312
Query: 91 FSLVASQEKEVGARLPQITSCYIRVRDGSLPVSFIKKYLVKKLYLASETEVEISLQGQPV 150
FSLVAS ++E G LPQI + ++R+RDG+ VSFI+KYL++KL L SE E+EI G+ V
Sbjct: 313 FSLVASNDQEGGTSLPQIPANFLRIRDGNTTVSFIQKYLMRKLDLESENEIEIKCMGEAV 372
Query: 151 LSSWQLQNLVDFWLQTVPANERIQTSIGSSAKDFVMVLKYSRK 193
+ + L NLVD WLQ ++R +GSSAKDF MVL Y+RK
Sbjct: 373 IPTLTLYNLVDLWLQKSSNHQRFAALVGSSAKDFTMVLVYARK 415
>AT1G06770.2 | Symbols: DRIP1 | DREB2A-interacting protein 1 |
chr1:2079222-2080658 REVERSE LENGTH=307
Length = 307
Score = 127 bits (318), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 102/162 (62%), Gaps = 9/162 (5%)
Query: 34 NSGDQNEFPPPKLNTFDLNQLHITEERTAK--ISEDLNVPAQPEIDLNSESSKAFGPIWF 91
N+GD P T ++ T+ + + + + N+P QP+ + +++ + GP+WF
Sbjct: 147 NNGD-----PTTSETVTPKRMRTTQRKRSATTLGDSRNLP-QPD-ESSAKQERRNGPVWF 199
Query: 92 SLVASQEKEVGARLPQITSCYIRVRDGSLPVSFIKKYLVKKLYLASETEVEISLQGQPVL 151
SLVAS ++E G LPQI + ++R+RDG+ VSFI+KYL++KL L SE E+EI G+ V+
Sbjct: 200 SLVASNDQEGGTSLPQIPANFLRIRDGNTTVSFIQKYLMRKLDLESENEIEIKCMGEAVI 259
Query: 152 SSWQLQNLVDFWLQTVPANERIQTSIGSSAKDFVMVLKYSRK 193
+ L NLVD WLQ ++R +GSSAKDF MVL Y+RK
Sbjct: 260 PTLTLYNLVDLWLQKSSNHQRFAALVGSSAKDFTMVLVYARK 301
>AT3G23060.1 | Symbols: | RING/U-box superfamily protein |
chr3:8200868-8203116 FORWARD LENGTH=480
Length = 480
Score = 114 bits (286), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 80/124 (64%)
Query: 70 VPAQPEIDLNSESSKAFGPIWFSLVASQEKEVGARLPQITSCYIRVRDGSLPVSFIKKYL 129
P E ++ E + P+WFSL S+ + + LP IT+C IRV+D ++ VS++KKYL
Sbjct: 346 APVSVEEEMKVEEGRNNNPVWFSLKPSKTQNIEMLLPPITACCIRVKDSNMTVSYLKKYL 405
Query: 130 VKKLYLASETEVEISLQGQPVLSSWQLQNLVDFWLQTVPANERIQTSIGSSAKDFVMVLK 189
+ KL L SE +VEI L+ +PV SS L NLVD+W+QT P ER +GSSA +F+M L
Sbjct: 406 MVKLGLESEDQVEIWLRDEPVCSSLTLHNLVDWWVQTTPLPERQSAMVGSSAAEFIMDLY 465
Query: 190 YSRK 193
YS K
Sbjct: 466 YSFK 469
>AT5G13250.1 | Symbols: | RING finger protein |
chr5:4234486-4241615 FORWARD LENGTH=387
Length = 387
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 5/109 (4%)
Query: 89 IWFSLVASQEKEVGARLPQITSCYIRVRDGSLPVSFIKKYLVKKLYLASET-EVEISLQG 147
IWF L ASQ + V LPQI Y+R++DG + V + KYLV KL L E+ +VEI +G
Sbjct: 276 IWFLLQASQNQTVEPFLPQIPKSYLRIKDGKMTVRLLMKYLVNKLRLEHESQQVEIRCRG 335
Query: 148 QPVLSSWQLQNLVD-FW---LQTVPANERIQTSIGSSAKDFVMVLKYSR 192
Q + LQ++ D W T ++ I SS D +MVL Y R
Sbjct: 336 QELEPVLTLQHVRDAIWRGSRDTSSLSQNITLLPNSSTSDHLMVLHYGR 384
>AT1G28080.1 | Symbols: | RING finger protein |
chr1:9789826-9790918 FORWARD LENGTH=291
Length = 291
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%)
Query: 89 IWFSLVASQEKEVGARLPQITSCYIRVRDGSLPVSFIKKYLVKKLYLASETEVEI 143
+WF L ASQ +E LPQ+ Y+R++DG + V + KYL+KKL L SE+EV I
Sbjct: 237 LWFLLQASQFQEREPFLPQVNKSYLRIKDGRITVRLLIKYLMKKLELDSESEVNI 291