Miyakogusa Predicted Gene

Lj5g3v1204350.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1204350.1 Non Chatacterized Hit- tr|I1IGS5|I1IGS5_BRADI
Uncharacterized protein OS=Brachypodium distachyon GN=,43.12,1e-18,
,CUFF.54971.1
         (194 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G30580.1 | Symbols: DRIP2 | DREB2A-interacting protein 2 | ch...   142   2e-34
AT1G06770.1 | Symbols: DRIP1 | DREB2A-interacting protein 1 | ch...   127   5e-30
AT1G06770.2 | Symbols: DRIP1 | DREB2A-interacting protein 1 | ch...   127   6e-30
AT3G23060.1 | Symbols:  | RING/U-box superfamily protein | chr3:...   114   3e-26
AT5G13250.1 | Symbols:  | RING finger protein | chr5:4234486-424...    69   2e-12
AT1G28080.1 | Symbols:  | RING finger protein | chr1:9789826-979...    56   1e-08

>AT2G30580.1 | Symbols: DRIP2 | DREB2A-interacting protein 2 |
           chr2:13026444-13030363 FORWARD LENGTH=420
          Length = 420

 Score =  142 bits (357), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 86/191 (45%), Positives = 118/191 (61%), Gaps = 14/191 (7%)

Query: 10  LVDSSDNDSQVSEVEVKTH---C---HQINNSGDQNEFPPPKLNTFDLNQLHITEERTAK 63
           L ++S ND Q S+ + K H   C    +I+N+GD     P    T  L +   T  + + 
Sbjct: 231 LGNASHNDVQGSKTKTKDHKRKCKLEEEISNNGD-----PTTSETATLKRTRRTRRKRSS 285

Query: 64  ISEDLNVPAQP-EIDLNSESSKAFGPIWFSLVASQEKEVGARLPQITSCYIRVRDGSLPV 122
              D  +P  P    L  E  +  G +WFSLVAS  +E  A LPQI + Y+R+RDG++PV
Sbjct: 286 TFGDSRIPLLPGAASLKQE--RRNGHVWFSLVASSNQEGEASLPQIPANYLRIRDGNIPV 343

Query: 123 SFIKKYLVKKLYLASETEVEISLQGQPVLSSWQLQNLVDFWLQTVPANERIQTSIGSSAK 182
           SFI+KYL++KL L SE EVEI+  G+PV+ + QL +LVD WL+T   ++R+  SIGSSAK
Sbjct: 344 SFIQKYLMRKLDLKSEDEVEITCMGEPVIPTLQLHSLVDLWLETTSKHQRVAASIGSSAK 403

Query: 183 DFVMVLKYSRK 193
           +FVMVL YSRK
Sbjct: 404 EFVMVLVYSRK 414


>AT1G06770.1 | Symbols: DRIP1 | DREB2A-interacting protein 1 |
           chr1:2079222-2081707 REVERSE LENGTH=421
          Length = 421

 Score =  127 bits (318), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 68/163 (41%), Positives = 103/163 (63%), Gaps = 9/163 (5%)

Query: 33  NNSGDQNEFPPPKLNTFDLNQLHITEERTAK--ISEDLNVPAQPEIDLNSESSKAFGPIW 90
           +N+GD     P    T    ++  T+ + +   + +  N+P QP+ + +++  +  GP+W
Sbjct: 260 SNNGD-----PTTSETVTPKRMRTTQRKRSATTLGDSRNLP-QPD-ESSAKQERRNGPVW 312

Query: 91  FSLVASQEKEVGARLPQITSCYIRVRDGSLPVSFIKKYLVKKLYLASETEVEISLQGQPV 150
           FSLVAS ++E G  LPQI + ++R+RDG+  VSFI+KYL++KL L SE E+EI   G+ V
Sbjct: 313 FSLVASNDQEGGTSLPQIPANFLRIRDGNTTVSFIQKYLMRKLDLESENEIEIKCMGEAV 372

Query: 151 LSSWQLQNLVDFWLQTVPANERIQTSIGSSAKDFVMVLKYSRK 193
           + +  L NLVD WLQ    ++R    +GSSAKDF MVL Y+RK
Sbjct: 373 IPTLTLYNLVDLWLQKSSNHQRFAALVGSSAKDFTMVLVYARK 415


>AT1G06770.2 | Symbols: DRIP1 | DREB2A-interacting protein 1 |
           chr1:2079222-2080658 REVERSE LENGTH=307
          Length = 307

 Score =  127 bits (318), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 68/162 (41%), Positives = 102/162 (62%), Gaps = 9/162 (5%)

Query: 34  NSGDQNEFPPPKLNTFDLNQLHITEERTAK--ISEDLNVPAQPEIDLNSESSKAFGPIWF 91
           N+GD     P    T    ++  T+ + +   + +  N+P QP+ + +++  +  GP+WF
Sbjct: 147 NNGD-----PTTSETVTPKRMRTTQRKRSATTLGDSRNLP-QPD-ESSAKQERRNGPVWF 199

Query: 92  SLVASQEKEVGARLPQITSCYIRVRDGSLPVSFIKKYLVKKLYLASETEVEISLQGQPVL 151
           SLVAS ++E G  LPQI + ++R+RDG+  VSFI+KYL++KL L SE E+EI   G+ V+
Sbjct: 200 SLVASNDQEGGTSLPQIPANFLRIRDGNTTVSFIQKYLMRKLDLESENEIEIKCMGEAVI 259

Query: 152 SSWQLQNLVDFWLQTVPANERIQTSIGSSAKDFVMVLKYSRK 193
            +  L NLVD WLQ    ++R    +GSSAKDF MVL Y+RK
Sbjct: 260 PTLTLYNLVDLWLQKSSNHQRFAALVGSSAKDFTMVLVYARK 301


>AT3G23060.1 | Symbols:  | RING/U-box superfamily protein |
           chr3:8200868-8203116 FORWARD LENGTH=480
          Length = 480

 Score =  114 bits (286), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 58/124 (46%), Positives = 80/124 (64%)

Query: 70  VPAQPEIDLNSESSKAFGPIWFSLVASQEKEVGARLPQITSCYIRVRDGSLPVSFIKKYL 129
            P   E ++  E  +   P+WFSL  S+ + +   LP IT+C IRV+D ++ VS++KKYL
Sbjct: 346 APVSVEEEMKVEEGRNNNPVWFSLKPSKTQNIEMLLPPITACCIRVKDSNMTVSYLKKYL 405

Query: 130 VKKLYLASETEVEISLQGQPVLSSWQLQNLVDFWLQTVPANERIQTSIGSSAKDFVMVLK 189
           + KL L SE +VEI L+ +PV SS  L NLVD+W+QT P  ER    +GSSA +F+M L 
Sbjct: 406 MVKLGLESEDQVEIWLRDEPVCSSLTLHNLVDWWVQTTPLPERQSAMVGSSAAEFIMDLY 465

Query: 190 YSRK 193
           YS K
Sbjct: 466 YSFK 469


>AT5G13250.1 | Symbols:  | RING finger protein |
           chr5:4234486-4241615 FORWARD LENGTH=387
          Length = 387

 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 5/109 (4%)

Query: 89  IWFSLVASQEKEVGARLPQITSCYIRVRDGSLPVSFIKKYLVKKLYLASET-EVEISLQG 147
           IWF L ASQ + V   LPQI   Y+R++DG + V  + KYLV KL L  E+ +VEI  +G
Sbjct: 276 IWFLLQASQNQTVEPFLPQIPKSYLRIKDGKMTVRLLMKYLVNKLRLEHESQQVEIRCRG 335

Query: 148 QPVLSSWQLQNLVD-FW---LQTVPANERIQTSIGSSAKDFVMVLKYSR 192
           Q +     LQ++ D  W     T   ++ I     SS  D +MVL Y R
Sbjct: 336 QELEPVLTLQHVRDAIWRGSRDTSSLSQNITLLPNSSTSDHLMVLHYGR 384


>AT1G28080.1 | Symbols:  | RING finger protein |
           chr1:9789826-9790918 FORWARD LENGTH=291
          Length = 291

 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 37/55 (67%)

Query: 89  IWFSLVASQEKEVGARLPQITSCYIRVRDGSLPVSFIKKYLVKKLYLASETEVEI 143
           +WF L ASQ +E    LPQ+   Y+R++DG + V  + KYL+KKL L SE+EV I
Sbjct: 237 LWFLLQASQFQEREPFLPQVNKSYLRIKDGRITVRLLIKYLMKKLELDSESEVNI 291