Miyakogusa Predicted Gene

Lj5g3v1201280.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1201280.1 tr|F5B9G0|F5B9G0_LUPAN Malate dehydrogenase
OS=Lupinus angustifolius GN=MDH1 PE=2 SV=1,94.88,0,seg,NULL;
Ldh_1_C,Lactate/malate dehydrogenase, C-terminal;
Ldh_1_N,Lactate/malate dehydrogenase, N-,CUFF.54965.1
         (332 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G43330.1 | Symbols:  | Lactate/malate dehydrogenase family pr...   562   e-160
AT1G04410.1 | Symbols:  | Lactate/malate dehydrogenase family pr...   559   e-159
AT5G56720.1 | Symbols:  | Lactate/malate dehydrogenase family pr...   486   e-137
AT5G58330.1 | Symbols:  | lactate/malate dehydrogenase family pr...   232   3e-61
AT5G58330.2 | Symbols:  | lactate/malate dehydrogenase family pr...   232   3e-61
AT5G58330.3 | Symbols:  | lactate/malate dehydrogenase family pr...   221   6e-58

>AT5G43330.1 | Symbols:  | Lactate/malate dehydrogenase family
           protein | chr5:17390552-17392449 FORWARD LENGTH=332
          Length = 332

 Score =  562 bits (1448), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 272/332 (81%), Positives = 290/332 (87%)

Query: 1   MAKDPVRVLVTGAAGQIGYALVPMVARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVD 60
           MAK+PVRVLVTGAAGQIGYALVPM+ARG+MLG DQPVILHMLDIP AAE+LNGVKMELVD
Sbjct: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGIMLGADQPVILHMLDIPFAAEALNGVKMELVD 60

Query: 61  AAFPLLKXXXXXXXXXXXXXXXNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKH 120
           AAFPLLK               N+AVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKH
Sbjct: 61  AAFPLLKGVVATTDAVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKH 120

Query: 121 AAANCKVLVVANPANTNALILKEYAPSIPEKNITCLTRLDHNRALGQISERLNIQVSDVK 180
           AA NCKVLVVANPANTNALILKE+APSIPEKNITCLTRLDHNRALGQ+SERL++ VSDVK
Sbjct: 121 AAPNCKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQVSERLSVPVSDVK 180

Query: 181 NVIIWGNHSSTQYPDVNHATIKTPAGEKSVRELVADDTWLNSEFITTVQQRGAAIIKARK 240
           NVIIWGNHSSTQYPDVNHAT+KT  GEK VRELV +D WLN EFI+TVQQRGAAIIKARK
Sbjct: 181 NVIIWGNHSSTQYPDVNHATVKTSVGEKPVRELVKNDEWLNGEFISTVQQRGAAIIKARK 240

Query: 241 XXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPITSQNGEWKIV 300
                      CDHIRDWV+GTPEGT+VSMGVYSDGSYNVPAGLIYSFP+T +NGEW IV
Sbjct: 241 LSSALSAASSACDHIRDWVVGTPEGTFVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIV 300

Query: 301 QGLSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
           QGL ID+ SRKK+DLTAEEL EEK LAYSCLS
Sbjct: 301 QGLPIDDASRKKMDLTAEELKEEKDLAYSCLS 332


>AT1G04410.1 | Symbols:  | Lactate/malate dehydrogenase family
           protein | chr1:1189418-1191267 REVERSE LENGTH=332
          Length = 332

 Score =  559 bits (1440), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 267/332 (80%), Positives = 291/332 (87%)

Query: 1   MAKDPVRVLVTGAAGQIGYALVPMVARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVD 60
           MAK+PVRVLVTGAAGQIGYALVPM+ARG+MLG DQPVILHMLDIPPAAE+LNGVKMEL+D
Sbjct: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGIMLGADQPVILHMLDIPPAAEALNGVKMELID 60

Query: 61  AAFPLLKXXXXXXXXXXXXXXXNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKH 120
           AAFPLLK               N+AVMVGGFPRKEGMERKDVMSKNVSIYKSQA+ALEKH
Sbjct: 61  AAFPLLKGVVATTDAVEGCTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQAAALEKH 120

Query: 121 AAANCKVLVVANPANTNALILKEYAPSIPEKNITCLTRLDHNRALGQISERLNIQVSDVK 180
           AA NCKVLVVANPANTNALILKE+APSIPEKNI+CLTRLDHNRALGQISERL++ VSDVK
Sbjct: 121 AAPNCKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQISERLSVPVSDVK 180

Query: 181 NVIIWGNHSSTQYPDVNHATIKTPAGEKSVRELVADDTWLNSEFITTVQQRGAAIIKARK 240
           NVIIWGNHSS+QYPDVNHA ++T +GEK VRELV DD WL+ EFI+TVQQRGAAIIKARK
Sbjct: 181 NVIIWGNHSSSQYPDVNHAKVQTSSGEKPVRELVKDDAWLDGEFISTVQQRGAAIIKARK 240

Query: 241 XXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPITSQNGEWKIV 300
                      CDHIRDWVLGTPEGT+VSMGVYSDGSY+VP+GLIYSFP+T +NG+W IV
Sbjct: 241 LSSALSAASSACDHIRDWVLGTPEGTFVSMGVYSDGSYSVPSGLIYSFPVTCRNGDWSIV 300

Query: 301 QGLSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
           QGL IDE SRKK+DLTAEEL EEK LAYSCLS
Sbjct: 301 QGLPIDEVSRKKMDLTAEELKEEKDLAYSCLS 332


>AT5G56720.1 | Symbols:  | Lactate/malate dehydrogenase family
           protein | chr5:22945537-22946718 FORWARD LENGTH=339
          Length = 339

 Score =  486 bits (1251), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 223/332 (67%), Positives = 268/332 (80%)

Query: 1   MAKDPVRVLVTGAAGQIGYALVPMVARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVD 60
           + KDP+RVL+TGAAG IGYA+ PM+ARG+MLGPDQP+ILH+LDI PA+ SL  VKMEL D
Sbjct: 7   IEKDPIRVLITGAAGNIGYAIAPMIARGIMLGPDQPMILHLLDIEPASSSLEAVKMELQD 66

Query: 61  AAFPLLKXXXXXXXXXXXXXXXNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKH 120
           +AFPLLK               NI +M+GGFPR  GMERKDVMSKNV IYK+QASALE++
Sbjct: 67  SAFPLLKGVIATTNVVEACKDVNIVIMIGGFPRIAGMERKDVMSKNVVIYKAQASALERY 126

Query: 121 AAANCKVLVVANPANTNALILKEYAPSIPEKNITCLTRLDHNRALGQISERLNIQVSDVK 180
           A+ +CKVLVVANPANTNALILKE+APSIPE+NITCLTRLDHNRAL Q++++L++ VS VK
Sbjct: 127 ASDDCKVLVVANPANTNALILKEFAPSIPEENITCLTRLDHNRALAQLADKLSVPVSSVK 186

Query: 181 NVIIWGNHSSTQYPDVNHATIKTPAGEKSVRELVADDTWLNSEFITTVQQRGAAIIKARK 240
           NVI+WGNHSSTQYPD NHAT+ T  G++ ++ELV D  WL +EFI  VQQRGAA+++ARK
Sbjct: 187 NVIVWGNHSSTQYPDTNHATVSTKTGDRPLKELVTDHNWLKNEFIVEVQQRGAAVLRARK 246

Query: 241 XXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPITSQNGEWKIV 300
                      CDHIRDW LGTP+GTWVSMGV SDGSY +P GL+YSFP+  + G WKIV
Sbjct: 247 QSSAFSAAGAACDHIRDWFLGTPKGTWVSMGVCSDGSYGIPPGLVYSFPVICEKGSWKIV 306

Query: 301 QGLSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
           QGLSIDEFSR+K+D +A EL+EEK LAYSCL+
Sbjct: 307 QGLSIDEFSREKMDDSARELAEEKDLAYSCLN 338


>AT5G58330.1 | Symbols:  | lactate/malate dehydrogenase family
           protein | chr5:23580010-23582287 REVERSE LENGTH=443
          Length = 443

 Score =  232 bits (591), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 128/329 (38%), Positives = 189/329 (57%), Gaps = 7/329 (2%)

Query: 3   KDPVRVLVTGAAGQIGYALVPMVARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVDAA 62
           K  + + V+GAAG I   L+  +A G + GPDQP+ L +L    + ++L GV MEL D+ 
Sbjct: 97  KKLINIAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSIQALEGVAMELEDSL 156

Query: 63  FPLLKXXXXXXXXXXXXXXXNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKHAA 122
           FPLL+                 A+++G  PR  GMER D++  N  I+  Q  AL K A+
Sbjct: 157 FPLLREVDIGTDPNEVFQDVEWAILIGAKPRGPGMERADLLDINGQIFAEQGKALNKAAS 216

Query: 123 ANCKVLVVANPANTNALILKEYAPSIPEKNITCLTRLDHNRALGQISERLNIQVSDVKNV 182
            N KVLVV NP NTNALI  + AP+IP KN   LTRLD NRA  Q++ +  +    V N+
Sbjct: 217 PNVKVLVVGNPCNTNALICLKNAPNIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNM 276

Query: 183 IIWGNHSSTQYPDVNHATIKTPAGEKSVRELVADDTWLNSEFITTVQQRGAAIIKARKXX 242
            IWGNHS+TQ PD  +A I        V+E++ D  WL   F  +VQ+RG  +I+     
Sbjct: 277 TIWGNHSTTQVPDFLNARING----LPVKEVITDHKWLEEGFTESVQKRGGLLIQKWGRS 332

Query: 243 XXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPITSQ-NGEWKIV 300
                     D I+  V  TPEG W S GVY+DG+ Y +  GL++S P  S+ +G++++V
Sbjct: 333 SAASTAVSIVDAIKSLVTPTPEGDWFSTGVYTDGNPYGIEEGLVFSMPCRSKGDGDYELV 392

Query: 301 QGLSIDEFSRKKLDLT-AEELSEEKALAY 328
           + + ID++ R+++  + AE L+E++ +A+
Sbjct: 393 KDVEIDDYLRQRIAKSEAELLAEKRCVAH 421


>AT5G58330.2 | Symbols:  | lactate/malate dehydrogenase family
           protein | chr5:23580010-23582287 REVERSE LENGTH=442
          Length = 442

 Score =  232 bits (591), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 128/329 (38%), Positives = 189/329 (57%), Gaps = 7/329 (2%)

Query: 3   KDPVRVLVTGAAGQIGYALVPMVARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVDAA 62
           K  + + V+GAAG I   L+  +A G + GPDQP+ L +L    + ++L GV MEL D+ 
Sbjct: 96  KKLINIAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSIQALEGVAMELEDSL 155

Query: 63  FPLLKXXXXXXXXXXXXXXXNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKHAA 122
           FPLL+                 A+++G  PR  GMER D++  N  I+  Q  AL K A+
Sbjct: 156 FPLLREVDIGTDPNEVFQDVEWAILIGAKPRGPGMERADLLDINGQIFAEQGKALNKAAS 215

Query: 123 ANCKVLVVANPANTNALILKEYAPSIPEKNITCLTRLDHNRALGQISERLNIQVSDVKNV 182
            N KVLVV NP NTNALI  + AP+IP KN   LTRLD NRA  Q++ +  +    V N+
Sbjct: 216 PNVKVLVVGNPCNTNALICLKNAPNIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNM 275

Query: 183 IIWGNHSSTQYPDVNHATIKTPAGEKSVRELVADDTWLNSEFITTVQQRGAAIIKARKXX 242
            IWGNHS+TQ PD  +A I        V+E++ D  WL   F  +VQ+RG  +I+     
Sbjct: 276 TIWGNHSTTQVPDFLNARING----LPVKEVITDHKWLEEGFTESVQKRGGLLIQKWGRS 331

Query: 243 XXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPITSQ-NGEWKIV 300
                     D I+  V  TPEG W S GVY+DG+ Y +  GL++S P  S+ +G++++V
Sbjct: 332 SAASTAVSIVDAIKSLVTPTPEGDWFSTGVYTDGNPYGIEEGLVFSMPCRSKGDGDYELV 391

Query: 301 QGLSIDEFSRKKLDLT-AEELSEEKALAY 328
           + + ID++ R+++  + AE L+E++ +A+
Sbjct: 392 KDVEIDDYLRQRIAKSEAELLAEKRCVAH 420


>AT5G58330.3 | Symbols:  | lactate/malate dehydrogenase family
           protein | chr5:23580010-23581751 REVERSE LENGTH=334
          Length = 334

 Score =  221 bits (563), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 122/315 (38%), Positives = 180/315 (57%), Gaps = 7/315 (2%)

Query: 17  IGYALVPMVARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVDAAFPLLKXXXXXXXXX 76
           I   L+  +A G + GPDQP+ L +L    + ++L GV MEL D+ FPLL+         
Sbjct: 2   ISNHLLFKLASGEVFGPDQPIALKLLGSERSIQALEGVAMELEDSLFPLLREVDIGTDPN 61

Query: 77  XXXXXXNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKHAAANCKVLVVANPANT 136
                   A+++G  PR  GMER D++  N  I+  Q  AL K A+ N KVLVV NP NT
Sbjct: 62  EVFQDVEWAILIGAKPRGPGMERADLLDINGQIFAEQGKALNKAASPNVKVLVVGNPCNT 121

Query: 137 NALILKEYAPSIPEKNITCLTRLDHNRALGQISERLNIQVSDVKNVIIWGNHSSTQYPDV 196
           NALI  + AP+IP KN   LTRLD NRA  Q++ +  +    V N+ IWGNHS+TQ PD 
Sbjct: 122 NALICLKNAPNIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDF 181

Query: 197 NHATIKTPAGEKSVRELVADDTWLNSEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIR 256
            +A I        V+E++ D  WL   F  +VQ+RG  +I+               D I+
Sbjct: 182 LNARING----LPVKEVITDHKWLEEGFTESVQKRGGLLIQKWGRSSAASTAVSIVDAIK 237

Query: 257 DWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPITSQ-NGEWKIVQGLSIDEFSRKKLD 314
             V  TPEG W S GVY+DG+ Y +  GL++S P  S+ +G++++V+ + ID++ R+++ 
Sbjct: 238 SLVTPTPEGDWFSTGVYTDGNPYGIEEGLVFSMPCRSKGDGDYELVKDVEIDDYLRQRIA 297

Query: 315 LT-AEELSEEKALAY 328
            + AE L+E++ +A+
Sbjct: 298 KSEAELLAEKRCVAH 312